Query 026808
Match_columns 233
No_of_seqs 141 out of 1209
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 13:01:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026808.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026808hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10146 aminoalkylphosphonic 99.8 1.3E-19 2.8E-24 130.3 12.8 136 22-202 2-137 (144)
2 TIGR02382 wecD_rffC TDP-D-fuco 99.8 3.2E-18 6.9E-23 128.9 15.8 141 20-204 40-186 (191)
3 TIGR03827 GNAT_ablB putative b 99.8 9.1E-19 2E-23 138.3 12.5 154 20-226 112-265 (266)
4 PRK09491 rimI ribosomal-protei 99.8 2.6E-18 5.7E-23 123.8 11.6 137 24-216 2-138 (146)
5 PRK10140 putative acetyltransf 99.8 5.3E-18 1.2E-22 124.2 13.2 149 23-217 3-155 (162)
6 PTZ00330 acetyltransferase; Pr 99.8 2.2E-17 4.8E-22 119.0 15.8 138 21-203 4-141 (147)
7 PRK03624 putative acetyltransf 99.8 3.1E-17 6.6E-22 117.0 14.5 128 23-203 2-130 (140)
8 COG1247 Sortase and related ac 99.8 1.4E-17 3E-22 120.1 12.3 162 24-230 2-167 (169)
9 KOG3216 Diamine acetyltransfer 99.8 2.7E-17 5.8E-22 113.8 12.5 144 22-203 2-146 (163)
10 PRK10975 TDP-fucosamine acetyl 99.7 8.8E-17 1.9E-21 121.4 15.6 138 23-204 46-189 (194)
11 PF13420 Acetyltransf_4: Acety 99.7 5.9E-17 1.3E-21 117.9 13.4 147 26-216 1-152 (155)
12 PF13523 Acetyltransf_8: Acety 99.7 9.8E-17 2.1E-21 116.4 13.6 141 26-205 1-143 (152)
13 TIGR02406 ectoine_EctA L-2,4-d 99.7 7.9E-17 1.7E-21 117.4 12.2 126 26-202 1-127 (157)
14 PRK10809 ribosomal-protein-S5- 99.7 1.6E-16 3.5E-21 120.0 14.0 161 17-217 11-180 (194)
15 PHA00673 acetyltransferase dom 99.7 1.3E-16 2.7E-21 113.5 11.9 135 27-203 10-146 (154)
16 PLN02706 glucosamine 6-phospha 99.7 4E-16 8.6E-21 112.9 14.4 138 21-203 4-144 (150)
17 PRK10151 ribosomal-protein-L7/ 99.7 2.4E-16 5.2E-21 117.5 13.3 156 20-217 7-169 (179)
18 PF13527 Acetyltransf_9: Acety 99.7 3.8E-16 8.3E-21 109.8 12.2 127 25-201 1-127 (127)
19 COG0456 RimI Acetyltransferase 99.7 1E-15 2.2E-20 113.8 14.4 161 21-228 9-174 (177)
20 PRK10514 putative acetyltransf 99.7 1.2E-15 2.6E-20 109.7 13.6 126 24-206 2-129 (145)
21 PF00583 Acetyltransf_1: Acety 99.7 5.9E-16 1.3E-20 100.5 10.6 79 113-199 5-83 (83)
22 KOG3139 N-acetyltransferase [G 99.7 5.1E-16 1.1E-20 108.7 10.6 69 141-209 84-152 (165)
23 PRK15130 spermidine N1-acetylt 99.7 3E-16 6.5E-21 117.7 10.3 155 22-221 5-163 (186)
24 TIGR01575 rimI ribosomal-prote 99.7 2.7E-15 5.9E-20 105.7 13.9 81 113-207 40-120 (131)
25 PRK07922 N-acetylglutamate syn 99.7 2.2E-15 4.8E-20 111.0 13.8 123 22-203 4-127 (169)
26 KOG3235 Subunit of the major N 99.7 2.4E-15 5.3E-20 104.5 12.1 151 24-228 2-154 (193)
27 PRK07757 acetyltransferase; Pr 99.7 3.7E-15 7.9E-20 108.1 13.1 122 24-204 2-123 (152)
28 TIGR03103 trio_acet_GNAT GNAT- 99.6 8.4E-15 1.8E-19 126.0 16.8 137 22-204 81-218 (547)
29 KOG3396 Glucosamine-phosphate 99.6 7.9E-15 1.7E-19 99.4 12.1 137 23-202 6-143 (150)
30 TIGR03585 PseH pseudaminic aci 99.6 1.7E-15 3.8E-20 110.2 9.6 147 25-217 2-152 (156)
31 PRK09831 putative acyltransfer 99.6 2.8E-15 6.1E-20 108.1 10.5 128 24-205 1-128 (147)
32 PRK10314 putative acyltransfer 99.6 2.5E-15 5.5E-20 108.8 9.8 137 27-227 10-150 (153)
33 COG1246 ArgA N-acetylglutamate 99.6 9.2E-15 2E-19 102.5 11.9 123 25-204 2-124 (153)
34 PF13673 Acetyltransf_10: Acet 99.6 1.6E-14 3.5E-19 99.9 11.9 74 90-198 44-117 (117)
35 TIGR01686 FkbH FkbH-like domai 99.6 2.2E-14 4.8E-19 116.2 13.0 136 19-201 182-319 (320)
36 PF13302 Acetyltransf_3: Acety 99.6 7E-14 1.5E-18 100.0 14.1 137 23-199 1-142 (142)
37 PLN02825 amino-acid N-acetyltr 99.6 4.7E-15 1E-19 125.2 8.9 124 24-204 368-491 (515)
38 PRK10562 putative acetyltransf 99.6 4.3E-14 9.4E-19 101.7 12.5 70 113-204 57-126 (145)
39 TIGR01890 N-Ac-Glu-synth amino 99.6 1.2E-14 2.7E-19 122.1 10.2 124 24-204 283-406 (429)
40 PHA01807 hypothetical protein 99.6 8.2E-14 1.8E-18 100.2 12.1 75 113-196 62-136 (153)
41 PRK12308 bifunctional arginino 99.6 4.3E-14 9.2E-19 123.6 12.3 125 22-205 462-586 (614)
42 TIGR03448 mycothiol_MshD mycot 99.5 2.9E-13 6.3E-18 108.6 15.4 139 21-204 147-289 (292)
43 PF13508 Acetyltransf_7: Acety 99.5 1.6E-13 3.6E-18 88.1 10.7 68 113-200 12-79 (79)
44 KOG3234 Acetyltransferase, (GN 99.5 5E-14 1.1E-18 98.0 8.1 154 24-231 2-155 (173)
45 PRK01346 hypothetical protein; 99.5 4.6E-13 1E-17 112.4 15.2 134 21-204 4-137 (411)
46 PRK05279 N-acetylglutamate syn 99.5 1.1E-13 2.4E-18 116.9 11.3 124 24-204 295-418 (441)
47 KOG3138 Predicted N-acetyltran 99.5 1.8E-13 3.8E-18 100.1 9.7 84 141-228 89-173 (187)
48 COG3153 Predicted acetyltransf 99.5 7.1E-13 1.5E-17 95.9 12.7 134 22-207 2-135 (171)
49 PRK13688 hypothetical protein; 99.4 1.7E-12 3.6E-17 93.9 10.4 81 113-204 54-134 (156)
50 TIGR03448 mycothiol_MshD mycot 99.4 1.4E-12 3E-17 104.7 10.7 74 113-203 55-128 (292)
51 PF08445 FR47: FR47-like prote 99.4 4.6E-12 1E-16 82.4 9.7 61 142-203 22-82 (86)
52 cd02169 Citrate_lyase_ligase C 99.4 2.9E-12 6.4E-17 101.8 10.0 71 113-204 15-85 (297)
53 COG3393 Predicted acetyltransf 99.3 3.2E-11 7E-16 91.8 11.8 78 113-204 186-263 (268)
54 KOG2488 Acetyltransferase (GNA 99.3 1.2E-11 2.5E-16 89.2 8.2 95 89-206 91-185 (202)
55 COG1670 RimL Acetyltransferase 99.3 4.1E-11 8.9E-16 89.3 11.4 95 113-217 77-172 (187)
56 COG3818 Predicted acetyltransf 99.3 5.5E-11 1.2E-15 80.3 10.4 159 19-228 3-166 (167)
57 COG3981 Predicted acetyltransf 99.3 1.6E-10 3.4E-15 82.3 11.8 84 113-205 78-161 (174)
58 TIGR00124 cit_ly_ligase [citra 99.2 1.6E-10 3.4E-15 93.4 10.7 82 90-206 31-112 (332)
59 COG2153 ElaA Predicted acyltra 99.2 5.8E-10 1.2E-14 77.1 10.2 94 113-228 59-153 (155)
60 KOG3397 Acetyltransferases [Ge 99.0 2E-09 4.3E-14 76.5 9.0 81 113-208 66-146 (225)
61 TIGR01211 ELP3 histone acetylt 99.0 9.9E-10 2.2E-14 93.6 8.4 93 103-203 413-516 (522)
62 KOG4144 Arylalkylamine N-acety 99.0 5.2E-10 1.1E-14 77.8 4.3 172 21-227 9-183 (190)
63 PF08444 Gly_acyl_tr_C: Aralky 98.9 1.3E-08 2.8E-13 65.2 6.7 73 112-202 7-79 (89)
64 PF13718 GNAT_acetyltr_2: GNAT 98.7 1.5E-08 3.2E-13 75.2 5.2 67 139-206 88-179 (196)
65 cd04301 NAT_SF N-Acyltransfera 98.7 1E-07 2.2E-12 57.4 8.2 57 113-180 8-64 (65)
66 PF12746 GNAT_acetyltran: GNAT 98.6 2E-06 4.4E-11 67.2 13.5 62 142-207 190-251 (265)
67 PF14542 Acetyltransf_CG: GCN5 98.6 8.5E-07 1.8E-11 56.3 8.8 65 113-196 8-72 (78)
68 KOG4135 Predicted phosphogluco 98.5 3.1E-06 6.8E-11 58.9 10.5 67 140-206 106-173 (185)
69 COG1444 Predicted P-loop ATPas 98.4 2.6E-07 5.5E-12 81.1 5.3 82 141-229 531-612 (758)
70 PF04958 AstA: Arginine N-succ 98.2 3.2E-05 7E-10 62.3 12.0 155 23-198 1-183 (342)
71 PF12568 DUF3749: Acetyltransf 98.2 1.5E-05 3.1E-10 54.7 8.4 84 88-201 36-123 (128)
72 COG4552 Eis Predicted acetyltr 98.2 3.1E-06 6.7E-11 67.4 5.5 80 113-203 48-127 (389)
73 COG2388 Predicted acetyltransf 98.1 1.3E-05 2.7E-10 52.9 6.5 52 113-177 24-75 (99)
74 PRK10456 arginine succinyltran 98.1 7.1E-05 1.5E-09 60.2 11.0 156 23-201 1-184 (344)
75 PF00765 Autoind_synth: Autoin 98.0 0.00025 5.5E-09 52.7 11.5 135 31-203 7-155 (182)
76 COG0454 WecD Histone acetyltra 97.9 1.5E-05 3.2E-10 54.0 4.4 44 147-198 87-130 (156)
77 COG3053 CitC Citrate lyase syn 97.9 0.00017 3.7E-09 56.2 9.9 74 113-207 46-119 (352)
78 COG5628 Predicted acetyltransf 97.9 0.0001 2.2E-09 49.5 7.0 74 113-199 46-119 (143)
79 PRK13834 putative autoinducer 97.9 0.00078 1.7E-08 51.2 12.9 64 137-203 95-165 (207)
80 TIGR03244 arg_catab_AstA argin 97.7 0.00042 9.2E-09 55.8 9.9 152 25-201 1-182 (336)
81 TIGR03243 arg_catab_AOST argin 97.7 0.00057 1.2E-08 55.0 10.6 154 25-201 1-182 (335)
82 TIGR03245 arg_AOST_alph argini 97.7 0.00056 1.2E-08 55.0 10.3 155 25-201 1-183 (336)
83 COG3375 Uncharacterized conser 97.6 0.0036 7.7E-08 47.1 12.6 139 23-208 2-142 (266)
84 PF13480 Acetyltransf_6: Acety 97.6 0.0019 4.2E-08 45.5 11.0 115 23-182 19-135 (142)
85 TIGR03694 exosort_acyl putativ 97.5 0.0015 3.3E-08 50.9 10.7 64 138-204 108-199 (241)
86 PF05301 Mec-17: Touch recepto 97.5 0.00094 2E-08 45.2 7.7 81 113-196 18-98 (120)
87 COG3882 FkbH Predicted enzyme 97.4 0.00066 1.4E-08 56.7 7.0 141 18-203 408-550 (574)
88 PF06852 DUF1248: Protein of u 97.4 0.01 2.2E-07 43.8 12.4 81 113-203 56-137 (181)
89 COG3138 AstA Arginine/ornithin 97.3 0.00082 1.8E-08 52.2 6.7 118 23-163 1-141 (336)
90 PF01233 NMT: Myristoyl-CoA:pr 97.3 0.0028 6E-08 45.3 8.8 60 113-178 88-147 (162)
91 PF13880 Acetyltransf_13: ESCO 97.3 0.00034 7.4E-09 42.9 3.6 29 142-170 6-34 (70)
92 COG1243 ELP3 Histone acetyltra 97.3 0.00031 6.8E-09 58.2 3.9 50 150-202 459-508 (515)
93 COG3916 LasI N-acyl-L-homoseri 97.1 0.02 4.3E-07 42.8 11.3 90 113-205 62-165 (209)
94 KOG2535 RNA polymerase II elon 96.5 0.0056 1.2E-07 49.1 5.1 48 152-202 498-546 (554)
95 KOG2779 N-myristoyl transferas 96.4 0.02 4.4E-07 46.1 7.7 57 113-175 145-201 (421)
96 PRK14852 hypothetical protein; 96.3 0.038 8.2E-07 51.0 9.7 73 134-209 114-187 (989)
97 KOG4601 Uncharacterized conser 95.8 0.023 4.9E-07 43.0 5.1 83 113-199 81-164 (264)
98 TIGR03019 pepcterm_femAB FemAB 95.7 0.24 5.1E-06 40.6 11.1 59 146-204 224-282 (330)
99 KOG2036 Predicted P-loop ATPas 95.5 0.024 5.3E-07 49.8 5.0 32 142-173 615-646 (1011)
100 TIGR03827 GNAT_ablB putative b 95.0 0.028 6E-07 44.6 3.7 63 157-229 21-83 (266)
101 COG2401 ABC-type ATPase fused 95.0 0.014 3E-07 48.6 1.8 66 139-204 239-309 (593)
102 PRK01305 arginyl-tRNA-protein 94.8 0.65 1.4E-05 36.1 10.5 76 113-204 153-228 (240)
103 PF01853 MOZ_SAS: MOZ/SAS fami 94.7 0.14 3.1E-06 37.9 6.3 33 142-174 81-113 (188)
104 KOG3698 Hyaluronoglucosaminida 94.6 0.16 3.6E-06 43.7 7.1 60 147-206 822-881 (891)
105 cd04264 DUF619-NAGS DUF619 dom 94.5 0.13 2.9E-06 34.1 5.2 45 140-189 33-77 (99)
106 PF04377 ATE_C: Arginine-tRNA- 94.4 0.26 5.6E-06 34.4 6.8 74 113-202 48-121 (128)
107 COG5092 NMT1 N-myristoyl trans 94.4 0.5 1.1E-05 37.8 8.9 118 24-175 82-199 (451)
108 PHA00432 internal virion prote 94.3 0.57 1.2E-05 32.9 8.2 30 174-203 92-121 (137)
109 cd04265 DUF619-NAGS-U DUF619 d 93.9 0.18 4E-06 33.4 5.0 45 140-189 33-77 (99)
110 PF13444 Acetyltransf_5: Acety 93.7 0.22 4.7E-06 33.2 5.2 27 137-163 74-100 (101)
111 PHA01733 hypothetical protein 93.0 0.7 1.5E-05 33.0 7.0 46 161-206 89-135 (153)
112 PLN03238 probable histone acet 92.2 0.42 9.1E-06 37.8 5.5 33 142-174 156-188 (290)
113 PF04768 DUF619: Protein of un 91.6 0.9 2E-05 33.4 6.5 55 140-200 87-143 (170)
114 PLN03239 histone acetyltransfe 91.2 0.66 1.4E-05 37.8 5.8 33 142-174 214-246 (351)
115 PTZ00064 histone acetyltransfe 90.4 0.72 1.6E-05 39.4 5.5 33 142-174 385-417 (552)
116 PF02474 NodA: Nodulation prot 90.3 0.7 1.5E-05 33.6 4.6 53 141-197 85-137 (196)
117 PF02799 NMT_C: Myristoyl-CoA: 89.2 7.6 0.00017 29.1 10.7 135 25-202 30-164 (190)
118 KOG2696 Histone acetyltransfer 89.2 0.78 1.7E-05 37.5 4.6 51 113-172 198-248 (403)
119 PLN00104 MYST -like histone ac 88.5 0.71 1.5E-05 39.1 4.2 33 142-174 307-339 (450)
120 KOG3014 Protein involved in es 88.1 4 8.8E-05 31.6 7.6 33 139-171 181-213 (257)
121 PF11124 Pho86: Inorganic phos 88.0 5.9 0.00013 31.8 8.7 83 113-202 178-270 (304)
122 PF11039 DUF2824: Protein of u 84.2 12 0.00025 26.1 8.6 80 113-208 47-127 (151)
123 COG2935 Putative arginyl-tRNA: 82.2 6.7 0.00015 30.5 6.4 59 113-185 160-218 (253)
124 KOG2747 Histone acetyltransfer 81.5 2.4 5.1E-05 35.3 4.0 33 142-174 261-293 (396)
125 PF09924 DUF2156: Uncharacteri 81.3 27 0.00058 28.1 10.5 58 113-183 190-247 (299)
126 PF04339 DUF482: Protein of un 80.1 18 0.0004 30.2 8.8 136 24-214 200-340 (370)
127 PF12261 T_hemolysin: Thermost 80.1 5.2 0.00011 29.7 5.1 59 138-203 84-142 (179)
128 PF09390 DUF1999: Protein of u 78.5 21 0.00046 25.3 11.0 76 113-202 65-140 (161)
129 PRK00756 acyltransferase NodA; 76.1 7.3 0.00016 28.3 4.6 51 141-195 85-135 (196)
130 cd04266 DUF619-NAGS-FABP DUF61 75.7 14 0.0003 25.0 5.7 46 139-189 37-84 (108)
131 KOG2779 N-myristoyl transferas 72.4 39 0.00085 27.9 8.4 41 159-202 356-396 (421)
132 PHA02769 hypothetical protein; 69.2 5.1 0.00011 27.0 2.4 44 159-204 94-140 (154)
133 PF12953 DUF3842: Domain of un 69.0 8.3 0.00018 26.8 3.5 51 153-207 7-57 (131)
134 PF11090 DUF2833: Protein of u 65.8 20 0.00044 23.0 4.5 28 175-202 56-83 (86)
135 cd03173 DUF619-like DUF619 dom 62.7 39 0.00084 22.4 5.6 45 140-189 32-76 (98)
136 COG5027 SAS2 Histone acetyltra 61.8 4.4 9.5E-05 33.1 1.2 30 142-171 263-292 (395)
137 COG5630 ARG2 Acetylglutamate s 61.5 18 0.00039 30.1 4.6 33 138-170 397-430 (495)
138 PRK04531 acetylglutamate kinas 60.4 68 0.0015 27.2 8.1 55 141-200 310-365 (398)
139 PF04816 DUF633: Family of unk 60.1 16 0.00034 27.8 3.9 49 156-204 73-123 (205)
140 COG0807 RibA GTP cyclohydrolas 55.9 52 0.0011 24.8 5.9 53 146-207 119-171 (193)
141 KOG4387 Ornithine decarboxylas 55.3 29 0.00063 25.6 4.4 79 146-230 104-186 (191)
142 cd07235 MRD Mitomycin C resist 54.5 15 0.00033 24.6 2.9 25 177-202 3-27 (122)
143 PF04339 DUF482: Protein of un 53.4 70 0.0015 26.8 7.0 69 146-217 105-173 (370)
144 PRK02983 lysS lysyl-tRNA synth 51.0 1.1E+02 0.0024 29.9 8.6 58 113-184 430-487 (1094)
145 PF13380 CoA_binding_2: CoA bi 49.8 45 0.00097 22.6 4.6 42 161-202 66-107 (116)
146 COG3473 Maleate cis-trans isom 48.9 36 0.00079 26.0 4.1 38 167-204 110-150 (238)
147 PF00925 GTP_cyclohydro2: GTP 48.8 28 0.00061 25.5 3.6 45 151-204 123-167 (169)
148 cd08353 Glo_EDI_BRP_like_7 Thi 44.9 22 0.00047 24.6 2.5 28 175-203 4-31 (142)
149 PF07395 Mig-14: Mig-14; Inte 43.6 41 0.00088 26.7 3.9 30 146-175 205-238 (264)
150 cd09012 Glo_EDI_BRP_like_24 Th 42.3 31 0.00067 23.2 2.9 24 178-202 4-27 (124)
151 COG2384 Predicted SAM-dependen 42.2 49 0.0011 25.5 4.0 49 156-204 92-142 (226)
152 PRK09318 bifunctional 3,4-dihy 41.8 83 0.0018 26.6 5.7 34 171-206 324-357 (387)
153 cd08356 Glo_EDI_BRP_like_17 Th 41.0 23 0.0005 23.5 2.1 20 187-206 13-32 (113)
154 PTZ00129 40S ribosomal protein 38.3 1.5E+02 0.0033 21.3 7.0 51 159-209 74-135 (149)
155 PF08901 DUF1847: Protein of u 37.4 39 0.00085 24.4 2.7 42 163-204 43-88 (157)
156 PRK15312 antimicrobial resista 37.1 66 0.0014 25.9 4.2 30 146-175 235-268 (298)
157 PRK09319 bifunctional 3,4-dihy 36.1 1.1E+02 0.0025 27.1 5.8 36 169-206 345-380 (555)
158 COG2266 GTP:adenosylcobinamide 35.9 1.2E+02 0.0025 22.6 5.0 45 159-204 26-70 (177)
159 cd08344 MhqB_like_N N-terminal 35.6 39 0.00084 22.2 2.5 29 175-204 3-31 (112)
160 cd08350 BLMT_like BLMT, a bleo 35.3 36 0.00078 22.7 2.3 19 187-205 14-32 (120)
161 PF02836 Glyco_hydro_2_C: Glyc 34.8 1.5E+02 0.0033 23.7 6.2 65 142-206 15-81 (298)
162 TIGR02990 ectoine_eutA ectoine 34.6 73 0.0016 24.9 4.1 43 162-204 107-152 (239)
163 PF02100 ODC_AZ: Ornithine dec 34.5 1.1E+02 0.0024 20.6 4.4 55 149-204 30-88 (108)
164 COG5092 NMT1 N-myristoyl trans 33.0 2.8E+02 0.006 22.8 9.6 28 17-44 252-279 (451)
165 TIGR03628 arch_S11P archaeal r 32.8 1.6E+02 0.0035 20.1 6.7 49 159-207 48-107 (114)
166 TIGR00505 ribA GTP cyclohydrol 32.8 1.3E+02 0.0028 22.6 5.1 47 150-205 121-167 (191)
167 cd07267 THT_Oxygenase_N N-term 32.8 43 0.00094 22.1 2.4 27 177-204 6-32 (113)
168 PLN02831 Bifunctional GTP cycl 31.8 1.3E+02 0.0028 26.1 5.4 35 170-206 376-410 (450)
169 cd04263 DUF619-NAGK-FABP DUF61 31.7 1.6E+02 0.0034 19.5 5.6 43 140-187 32-74 (98)
170 PRK00393 ribA GTP cyclohydrola 31.0 95 0.0021 23.4 4.1 48 149-205 123-170 (197)
171 PRK14831 undecaprenyl pyrophos 30.7 70 0.0015 25.2 3.4 34 151-184 41-74 (249)
172 cd08342 HPPD_N_like N-terminal 30.3 82 0.0018 21.6 3.5 28 177-205 3-31 (136)
173 cd08346 PcpA_N_like N-terminal 30.1 73 0.0016 21.0 3.2 29 175-204 2-31 (126)
174 TIGR00055 uppS undecaprenyl di 29.7 83 0.0018 24.4 3.6 34 151-184 20-53 (226)
175 PRK14837 undecaprenyl pyrophos 29.6 85 0.0018 24.4 3.7 34 151-184 27-60 (230)
176 PRK09311 bifunctional 3,4-dihy 29.4 1.4E+02 0.0031 25.4 5.3 35 170-206 342-376 (402)
177 cd08358 Glo_EDI_BRP_like_21 Th 29.0 80 0.0017 21.9 3.2 26 178-204 6-32 (127)
178 PRK09607 rps11p 30S ribosomal 28.3 2.2E+02 0.0047 20.1 7.0 51 159-209 55-116 (132)
179 PRK08815 GTP cyclohydrolase; P 27.2 2E+02 0.0043 24.3 5.7 34 171-206 309-342 (375)
180 PF00411 Ribosomal_S11: Riboso 27.0 2E+02 0.0044 19.3 5.3 49 159-207 45-96 (110)
181 PF03376 Adeno_E3B: Adenovirus 26.8 31 0.00067 20.7 0.7 13 150-162 53-65 (67)
182 cd08362 BphC5-RrK37_N_like N-t 26.5 63 0.0014 21.3 2.4 31 174-205 3-34 (120)
183 COG2898 Uncharacterized conser 26.4 4.1E+02 0.0089 23.7 7.6 57 113-182 402-458 (538)
184 PF01255 Prenyltransf: Putativ 26.1 91 0.002 24.0 3.4 34 151-184 15-48 (223)
185 cd07252 BphC1-RGP6_N_like N-te 26.0 79 0.0017 21.0 2.8 28 175-203 3-31 (120)
186 PRK10150 beta-D-glucuronidase; 26.0 3.2E+02 0.0069 24.6 7.2 69 138-206 288-358 (604)
187 PRK03681 hypA hydrogenase nick 25.9 98 0.0021 21.0 3.1 23 156-178 4-26 (114)
188 COG2231 Uncharacterized protei 25.3 57 0.0012 24.8 2.0 40 156-202 121-160 (215)
189 PRK14832 undecaprenyl pyrophos 25.1 1E+02 0.0022 24.4 3.5 34 151-184 39-72 (253)
190 cd00475 CIS_IPPS Cis (Z)-Isopr 24.7 1.1E+02 0.0025 23.5 3.6 34 151-184 21-54 (221)
191 PRK12485 bifunctional 3,4-dihy 24.3 1.2E+02 0.0026 25.5 3.9 35 167-204 331-365 (369)
192 TIGR03645 glyox_marine lactoyl 24.3 83 0.0018 22.6 2.7 28 174-202 4-32 (162)
193 COG1212 KdsB CMP-2-keto-3-deox 24.3 2.1E+02 0.0046 22.3 4.8 46 159-206 27-72 (247)
194 PRK14841 undecaprenyl pyrophos 24.0 1.2E+02 0.0025 23.7 3.5 34 151-184 24-57 (233)
195 PF04260 DUF436: Protein of un 23.9 2.1E+02 0.0045 21.1 4.5 51 156-206 42-95 (172)
196 PTZ00349 dehydrodolichyl dipho 23.8 1.1E+02 0.0024 25.1 3.5 34 151-184 40-73 (322)
197 PF04015 DUF362: Domain of unk 23.6 1.8E+02 0.0039 21.8 4.6 45 159-203 21-67 (206)
198 PRK10240 undecaprenyl pyrophos 23.3 1.2E+02 0.0025 23.6 3.4 34 151-184 14-47 (229)
199 PRK14842 undecaprenyl pyrophos 23.3 1.3E+02 0.0028 23.6 3.7 34 151-184 29-62 (241)
200 PRK14829 undecaprenyl pyrophos 22.6 1.2E+02 0.0027 23.7 3.5 33 151-183 35-67 (243)
201 cd07253 Glo_EDI_BRP_like_2 Thi 22.4 1.2E+02 0.0025 19.9 3.1 31 174-205 3-34 (125)
202 PF14696 Glyoxalase_5: Hydroxy 22.4 48 0.001 23.5 1.1 31 174-205 9-39 (139)
203 PRK14834 undecaprenyl pyrophos 22.3 1.5E+02 0.0033 23.4 3.9 35 151-185 35-69 (249)
204 cd07240 ED_TypeI_classII_N N-t 22.2 1.1E+02 0.0023 19.9 2.8 28 177-205 5-33 (117)
205 PRK14840 undecaprenyl pyrophos 22.0 1.3E+02 0.0028 23.7 3.5 34 151-184 43-76 (250)
206 cd07265 2_3_CTD_N N-terminal d 21.8 1E+02 0.0022 20.4 2.7 29 175-204 5-34 (122)
207 TIGR01440 conserved hypothetic 21.7 2.2E+02 0.0048 20.9 4.3 51 156-206 42-95 (172)
208 PF12681 Glyoxalase_2: Glyoxal 21.5 86 0.0019 20.0 2.2 19 187-205 7-26 (108)
209 PF12652 CotJB: CotJB protein; 21.4 37 0.00079 21.4 0.3 36 161-196 3-38 (78)
210 PRK13690 hypothetical protein; 21.3 2.6E+02 0.0056 20.8 4.6 51 156-206 49-102 (184)
211 PF10566 Glyco_hydro_97: Glyco 21.1 2.4E+02 0.0052 22.6 4.8 44 159-203 71-125 (273)
212 PRK14833 undecaprenyl pyrophos 21.0 1.4E+02 0.0031 23.3 3.5 34 151-184 25-58 (233)
213 PRK05031 tRNA (uracil-5-)-meth 21.0 2.2E+02 0.0048 23.7 4.9 60 145-212 290-350 (362)
214 PRK14019 bifunctional 3,4-dihy 21.0 1.6E+02 0.0034 24.8 4.0 35 168-205 329-363 (367)
No 1
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.83 E-value=1.3e-19 Score=130.32 Aligned_cols=136 Identities=21% Similarity=0.227 Sum_probs=99.8
Q ss_pred CceEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCcee
Q 026808 22 PEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKV 101 (233)
Q Consensus 22 ~~i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (233)
+++.||+++++|++.+.++..+.....+.. ....+.+...+ . .+...++++..+
T Consensus 2 ~~~~ir~a~~~D~~~l~~l~~~~~~~~~~~----~~~~~~~~~~l------------------~-~~~~~~~v~~~~--- 55 (144)
T PRK10146 2 PACELRPATQYDTDAVYALICELKQAEFDH----QAFRVGFNANL------------------R-DPNMRYHLALLD--- 55 (144)
T ss_pred CccEEeeCcHhhHHHHHHHHHHHhcccCCH----HHHHHHHHHHh------------------c-CCCceEEEEEEC---
Confidence 468899999999999999988765433321 11112221111 1 122345666666
Q ss_pred cccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEE
Q 026808 102 GGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALH 181 (233)
Q Consensus 102 ~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~ 181 (233)
++++|++.+....... .....++|..++|+|+|||+|+|+.|+.++++.|++.|+..+.+.
T Consensus 56 -----------~~ivG~~~~~~~~~~~--------~~~~~~~i~~l~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~i~l~ 116 (144)
T PRK10146 56 -----------GEVVGMIGLHLQFHLH--------HVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELS 116 (144)
T ss_pred -----------CEEEEEEEEEeccccc--------ccchhheeheeEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 7899998875421110 111235788999999999999999999999999999999999999
Q ss_pred eecCChhhHHHHHhCCCEEEe
Q 026808 182 CDFNNLGATKLYKGQGFKCVK 202 (233)
Q Consensus 182 ~~~~n~~a~~~y~k~Gf~~~~ 202 (233)
+...|..|++||+++||+..+
T Consensus 117 ~~~~n~~a~~fY~~~Gf~~~~ 137 (144)
T PRK10146 117 TNVKRHDAHRFYLREGYEQSH 137 (144)
T ss_pred cCCCchHHHHHHHHcCCchhh
Confidence 999999999999999998764
No 2
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.80 E-value=3.2e-18 Score=128.88 Aligned_cols=141 Identities=20% Similarity=0.205 Sum_probs=100.5
Q ss_pred CCCceEEEeCCcccHHHHHhhhhhccCC-----CCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCcc-cee
Q 026808 20 XSPEIVVREARIEDIWEVAETHCSCFFP-----NYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDE-TFF 93 (233)
Q Consensus 20 ~~~~i~iR~~~~~D~~~i~~l~~~~f~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 93 (233)
...++.||+++++|++.|.++.++.+.. .|..+.+ ....+....... ....... .++
T Consensus 40 ~~~~~~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--------------~~~~~~~~~~i 102 (191)
T TIGR02382 40 ATSDPGARVATETDIPALRQLASAAFALSRFRAPWYAPDD---SGRFYAQWVENA--------------VRGTFDHQCLI 102 (191)
T ss_pred CCCCCcceeCChhhHHHHHHHHHHHhhccccCCCCcCHHH---HHHHHHHHHHHH--------------hcCCCCCeEEE
Confidence 3445799999999999999999987642 2222211 111111211111 0111112 233
Q ss_pred eeecCceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhc
Q 026808 94 LGSEDFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW 173 (233)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~ 173 (233)
+...+ ++++|++.+..... ...+|..++|+|+|||+|+|++|++.+++++++.
T Consensus 103 ~~~~~--------------g~iiG~i~l~~~~~-------------~~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~~ 155 (191)
T TIGR02382 103 LRDAS--------------GDPRGYVTLRELND-------------TDARIGLLAVFPGAQSRGIGAELMQTALNWCYAR 155 (191)
T ss_pred EEccC--------------CeEEEEEEEEecCC-------------CceEEEEEEECHHHcCCCHHHHHHHHHHHHHHHc
Confidence 33445 78999998764211 1267888999999999999999999999999999
Q ss_pred CCCeEEEEeecCChhhHHHHHhCCCEEEecC
Q 026808 174 GCRSIALHCDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 174 g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
|+..+.+.|...|.+|++||+|+||+.+++.
T Consensus 156 g~~~I~l~v~~~N~~A~~~Y~klGF~~~~~~ 186 (191)
T TIGR02382 156 GLTRLRVATQMGNTAALRLYIRSGANIESTA 186 (191)
T ss_pred CCCEEEEEeCCCCHHHHHHHHHcCCccccce
Confidence 9999999999999999999999999988764
No 3
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.80 E-value=9.1e-19 Score=138.31 Aligned_cols=154 Identities=18% Similarity=0.213 Sum_probs=115.9
Q ss_pred CCCceEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCc
Q 026808 20 XSPEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDF 99 (233)
Q Consensus 20 ~~~~i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (233)
.+..+.||+++++|++.+.+|+.+.|.. ++.+.... +.+.... .+...++++..+
T Consensus 112 ~~~~~~IR~a~~~D~~~l~~L~~~v~~~-~~~~~~~~---~~l~~~~--------------------~~~~~~~v~~~~- 166 (266)
T TIGR03827 112 LPEGFTLRIATEDDADAMAALYRKVFPT-YPFPIHDP---AYLLETM--------------------KSNVVYFGVEDG- 166 (266)
T ss_pred CCCceEEEECCHHHHHHHHHHHHHHhcc-CCCCccCH---HHHHHHh--------------------cCCcEEEEEEEC-
Confidence 3456999999999999999999988742 22221111 1111111 112345566666
Q ss_pred eecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEE
Q 026808 100 KVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIA 179 (233)
Q Consensus 100 ~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~ 179 (233)
+++||++.+... .....++|..++|+|+|||+|+|++||+.+++++++.|+..++
T Consensus 167 -------------g~iVG~~~~~~~------------~~~~~~eI~~i~V~P~yRG~GiG~~Ll~~l~~~a~~~g~~~l~ 221 (266)
T TIGR03827 167 -------------GKIIALASAEMD------------PENGNAEMTDFATLPEYRGKGLAKILLAAMEKEMKEKGIRTAY 221 (266)
T ss_pred -------------CEEEEEEEEecC------------CCCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEE
Confidence 789998876321 0112388999999999999999999999999999999999999
Q ss_pred EEeecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcchhHHHHHhh
Q 026808 180 LHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKL 226 (233)
Q Consensus 180 l~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~~~~~~m~k~ 226 (233)
+.+...|.++.++|+|+||+.+++..+.....+.+.+. ..+.|.
T Consensus 222 ~~~~~~n~~a~~ly~k~GF~~~G~l~n~~~i~G~~~d~---~i~~k~ 265 (266)
T TIGR03827 222 TIARASSYGMNITFARLGYAYGGTLVNNTNISGGFESM---NIWYKQ 265 (266)
T ss_pred eehhhcchhHHHHHHHcCCccccEEeecceecCCcccc---eeeeec
Confidence 99999999999999999999999998888888887763 444443
No 4
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.78 E-value=2.6e-18 Score=123.82 Aligned_cols=137 Identities=15% Similarity=0.150 Sum_probs=99.4
Q ss_pred eEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceecc
Q 026808 24 IVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGG 103 (233)
Q Consensus 24 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (233)
+.||+++++|++.+.++....+...|... .+.... ......+....+
T Consensus 2 ~~iR~~~~~D~~~l~~l~~~~~~~~~~~~--------~~~~~~--------------------~~~~~~~~~~~~----- 48 (146)
T PRK09491 2 NTISSLTPADLPAAYHIEQRAHAFPWSEK--------TFASNQ--------------------GERYLNLKLTVN----- 48 (146)
T ss_pred cchhcCChhhhHHHHHHHHhcCCCCCCHH--------HHHHHH--------------------hcCceEEEEEEC-----
Confidence 68999999999999999876654344221 111000 011112223344
Q ss_pred cCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEee
Q 026808 104 LDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCD 183 (233)
Q Consensus 104 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~ 183 (233)
++++|++.+..... ..++..++|+|+|||+|+|+++++.+++.+++.++..+.+.+.
T Consensus 49 ---------~~~vG~~~~~~~~~--------------~~~~~~i~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~~~~~~~ 105 (146)
T PRK09491 49 ---------GQMAAFAITQVVLD--------------EATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVR 105 (146)
T ss_pred ---------CeEEEEEEEEeecC--------------ceEEEEEEECHHHccCCHHHHHHHHHHHHHHHCCCcEEEEEEc
Confidence 78899987753211 1567788999999999999999999999999889999999999
Q ss_pred cCChhhHHHHHhCCCEEEecCCCCCCCCCCCCc
Q 026808 184 FNNLGATKLYKGQGFKCVKVPEGANWPQPKNSP 216 (233)
Q Consensus 184 ~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~ 216 (233)
..|.++.++|+|+||+..+....+.+....+.|
T Consensus 106 ~~N~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~d 138 (146)
T PRK09491 106 ASNAAAIALYESLGFNEVTIRRNYYPTADGRED 138 (146)
T ss_pred cCCHHHHHHHHHcCCEEeeeeeccccCCCCcee
Confidence 999999999999999998877665443232544
No 5
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.78 E-value=5.3e-18 Score=124.19 Aligned_cols=149 Identities=23% Similarity=0.322 Sum_probs=103.3
Q ss_pred ceEEEeCCcccHHHHHhhhhhc--cCCCCCCh-HHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCc
Q 026808 23 EIVVREARIEDIWEVAETHCSC--FFPNYTFP-LDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDF 99 (233)
Q Consensus 23 ~i~iR~~~~~D~~~i~~l~~~~--f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (233)
++.||+++++|++.+.++..+. +......+ .....+.. .+ ........+++..+
T Consensus 3 ~i~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~------------------~~~~~~~~~v~~~~- 59 (162)
T PRK10140 3 EIVIRHAETRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQE----RL------------------ADRPGIKQLVACID- 59 (162)
T ss_pred ccEEEecchhhHHHHHHHHhCcccccccccCCCcCHHHHHH----Hh------------------hcCCCcEEEEEEEC-
Confidence 4889999999999999999753 11110011 01011111 11 11112234555555
Q ss_pred eecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHh-cCCCeE
Q 026808 100 KVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARG-WGCRSI 178 (233)
Q Consensus 100 ~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~-~g~~~i 178 (233)
++++|++.+..... + .....+.+ .++|+|+|||+|||++|++.+++++++ .++..+
T Consensus 60 -------------~~~vG~~~~~~~~~--~-------~~~~~~~~-~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i 116 (162)
T PRK10140 60 -------------GDVVGHLTIDVQQR--P-------RRSHVADF-GICVDSRWKNRGVASALMREMIEMCDNWLRVDRI 116 (162)
T ss_pred -------------CEEEEEEEEecccc--c-------ccceEEEE-EEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEE
Confidence 79999998754210 0 01122444 589999999999999999999999998 599999
Q ss_pred EEEeecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcc
Q 026808 179 ALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPD 217 (233)
Q Consensus 179 ~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~ 217 (233)
.+.+.+.|.+|++||+|+||+..+....+.+..+.+.+.
T Consensus 117 ~l~v~~~N~~a~~~y~k~GF~~~g~~~~~~~~~~~~~d~ 155 (162)
T PRK10140 117 ELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDA 155 (162)
T ss_pred EEEEEcCCHHHHHHHHHCCCEEEeecccceeeCCeEEEE
Confidence 999999999999999999999999887776666665553
No 6
>PTZ00330 acetyltransferase; Provisional
Probab=99.78 E-value=2.2e-17 Score=119.03 Aligned_cols=138 Identities=20% Similarity=0.265 Sum_probs=93.4
Q ss_pred CCceEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCce
Q 026808 21 SPEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFK 100 (233)
Q Consensus 21 ~~~i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (233)
+.++.||+++++|++.+.+++........... ... ..+..... . ......++++..+
T Consensus 4 ~~~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~---~~~-~~~~~~~~----~-------------~~~~~~~~~~~~~-- 60 (147)
T PTZ00330 4 SGSLELRDLEEGDLGSVLELLSHLTSAPALSQ---EEL-EQIAARRR----L-------------AGVVTRVFVHSPT-- 60 (147)
T ss_pred cceEEEEEcccccHHHHHHHHHHhcCCCccch---hHH-HHHHHHHh----c-------------CCCceEEEEEeCC--
Confidence 34589999999999999999886543222111 111 11111100 0 0111233444455
Q ss_pred ecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEE
Q 026808 101 VGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIAL 180 (233)
Q Consensus 101 ~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l 180 (233)
++++|++.+........ .....++|..++|+|+|||+|||++|++++++++++.++..+.+
T Consensus 61 ------------~~~vG~~~~~~~~~~~~-------~~~~~~~i~~~~V~~~~rg~Gig~~l~~~~~~~a~~~~~~~l~l 121 (147)
T PTZ00330 61 ------------QRIVGTASLFVEPKFTR-------GGKCVGHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVIL 121 (147)
T ss_pred ------------CEEEEEEEEEecccccc-------CCCceEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEE
Confidence 78999988753211100 11124789999999999999999999999999999999888877
Q ss_pred EeecCChhhHHHHHhCCCEEEec
Q 026808 181 HCDFNNLGATKLYKGQGFKCVKV 203 (233)
Q Consensus 181 ~~~~~n~~a~~~y~k~Gf~~~~~ 203 (233)
.+ |..|.+||+++||+.+..
T Consensus 122 ~~---n~~a~~~y~k~GF~~~~~ 141 (147)
T PTZ00330 122 DC---TEDMVAFYKKLGFRACER 141 (147)
T ss_pred ec---ChHHHHHHHHCCCEEece
Confidence 65 689999999999998764
No 7
>PRK03624 putative acetyltransferase; Provisional
Probab=99.76 E-value=3.1e-17 Score=116.99 Aligned_cols=128 Identities=21% Similarity=0.297 Sum_probs=94.9
Q ss_pred ceEEEeCCcccHHHHHhhhhhccC-CCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCcee
Q 026808 23 EIVVREARIEDIWEVAETHCSCFF-PNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKV 101 (233)
Q Consensus 23 ~i~iR~~~~~D~~~i~~l~~~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (233)
.+.||+++++|++.+.++...... ..|..+ ...+.... ..+...++++..+
T Consensus 2 ~~~ir~~~~~d~~~i~~l~~~~~~~~~~~~~------~~~~~~~~-------------------~~~~~~~~v~~~~--- 53 (140)
T PRK03624 2 AMEIRVFRQADFEAVIALWERCDLTRPWNDP------EMDIERKL-------------------NHDPSLFLVAEVG--- 53 (140)
T ss_pred ceEEEEcccccHHHHHHHHHhcCCCcchhhH------HHHHHHHh-------------------cCCCceEEEEEcC---
Confidence 588999999999999999887611 111111 01111111 0122345666666
Q ss_pred cccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEE
Q 026808 102 GGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALH 181 (233)
Q Consensus 102 ~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~ 181 (233)
++++|++.+.... ...++..++|+|+|||+|+|++|+..+++.+++.|++.+.+.
T Consensus 54 -----------~~~vG~~~~~~~~--------------~~~~i~~i~v~p~~rg~Gig~~ll~~~~~~~~~~~~~~~~~~ 108 (140)
T PRK03624 54 -----------GEVVGTVMGGYDG--------------HRGWAYYLAVHPDFRGRGIGRALVARLEKKLIARGCPKINLQ 108 (140)
T ss_pred -----------CcEEEEEEeeccC--------------CCceEEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 7899988764210 125677899999999999999999999999999999999999
Q ss_pred eecCChhhHHHHHhCCCEEEec
Q 026808 182 CDFNNLGATKLYKGQGFKCVKV 203 (233)
Q Consensus 182 ~~~~n~~a~~~y~k~Gf~~~~~ 203 (233)
+.+.|..+.++|+|+||+..+.
T Consensus 109 ~~~~N~~~~~~y~k~GF~~~~~ 130 (140)
T PRK03624 109 VREDNDAVLGFYEALGYEEQDR 130 (140)
T ss_pred EecCcHHHHHHHHHcCCccccE
Confidence 9999999999999999998664
No 8
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.76 E-value=1.4e-17 Score=120.05 Aligned_cols=162 Identities=19% Similarity=0.201 Sum_probs=118.6
Q ss_pred eEEEeCCcccHHHHHhhhhhccCCCCC-C---hHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCc
Q 026808 24 IVVREARIEDIWEVAETHCSCFFPNYT-F---PLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDF 99 (233)
Q Consensus 24 i~iR~~~~~D~~~i~~l~~~~f~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (233)
+.||+++..|++.|.++++......-. + |.+...+.+++.... .....++++..+
T Consensus 2 ~~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~--------------------~~g~p~~V~~~~- 60 (169)
T COG1247 2 MEIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRT--------------------RDGYPVVVAEEE- 60 (169)
T ss_pred cEEecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcc--------------------cCCceEEEEEcC-
Confidence 689999999999999999977653221 1 222233333321110 111244555443
Q ss_pred eecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEE
Q 026808 100 KVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIA 179 (233)
Q Consensus 100 ~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~ 179 (233)
+|+++|++.+...... +.-+...-..++|+|+.||+|+|++|++.+++.+...|+..+.
T Consensus 61 ------------~g~v~G~a~~~~fr~r---------~ay~~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lv 119 (169)
T COG1247 61 ------------DGKVLGYASAGPFRER---------PAYRHTVELSIYLDPAARGKGLGKKLLQALITEARALGVRELV 119 (169)
T ss_pred ------------CCeEEEEEEeeeccCc---------cccceEEEEEEEECcccccccHHHHHHHHHHHHHHhCCeEEEE
Confidence 2799999988653221 1112244458999999999999999999999999999999999
Q ss_pred EEeecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcchhHHHHHhhhcCC
Q 026808 180 LHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLKAP 230 (233)
Q Consensus 180 l~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~~~~~~m~k~l~~~ 230 (233)
..+...|.+++++++++||+.++..+......+.+.| .++|.+.|++.
T Consensus 120 a~I~~~n~aSi~lh~~~GF~~~G~~~~vg~k~g~wld---~~~~~~~l~~~ 167 (169)
T COG1247 120 AGIESDNLASIALHEKLGFEEVGTFPEVGDKFGRWLD---LVLMQLLLEEG 167 (169)
T ss_pred EEEcCCCcHhHHHHHHCCCEEeccccccccccceEEe---eeeeehhhccc
Confidence 9999999999999999999999998887777777776 57888887654
No 9
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=99.76 E-value=2.7e-17 Score=113.77 Aligned_cols=144 Identities=19% Similarity=0.130 Sum_probs=99.2
Q ss_pred CceEEEeCCcccHHHHHhhhhhccCCCCC-ChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCce
Q 026808 22 PEIVVREARIEDIWEVAETHCSCFFPNYT-FPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFK 100 (233)
Q Consensus 22 ~~i~iR~~~~~D~~~i~~l~~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (233)
+.++||.++++|.+.|.+|..+-..-+.. .+. ......+... .|.+++. ..++++.-+
T Consensus 2 ~~~~IR~at~~D~~~i~rLikela~Fek~~~~v--~~te~~l~~~--~F~d~~~---------------~~~~v~~ie-- 60 (163)
T KOG3216|consen 2 DNIRIRLATPKDCEDILRLIKELAEFEKLEDQV--EATEENLARD--GFIDPPF---------------KHWLVAAIE-- 60 (163)
T ss_pred CceEEEecCcccHHHHHHHHHHHHHHHHhccch--hhchhhhhhh--hccCCCc---------------cEEEEEEEe--
Confidence 35899999999999999998844210100 000 1111111111 1333332 222222221
Q ss_pred ecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEE
Q 026808 101 VGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIAL 180 (233)
Q Consensus 101 ~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l 180 (233)
..++.++|++.+...-. .|. .+...||..++|.|+|||+|+|+.|++.+-+.|.+.|+.+++.
T Consensus 61 ---------~~~~~~aGf~~yf~~ys------tW~--~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w 123 (163)
T KOG3216|consen 61 ---------TSGEVVAGFALYFNNYS------TWL--GKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEW 123 (163)
T ss_pred ---------cCCCceeEEeeeecccc------ccc--ccceEEEEeeEecchhcccChHHHHHHHHHHHHHHcCCCcEEE
Confidence 00278999998754222 222 1234999999999999999999999999999999999999999
Q ss_pred EeecCChhhHHHHHhCCCEEEec
Q 026808 181 HCDFNNLGATKLYKGQGFKCVKV 203 (233)
Q Consensus 181 ~~~~~n~~a~~~y~k~Gf~~~~~ 203 (233)
.|..-|.+|+.||++.|++....
T Consensus 124 ~vldwN~rAi~lY~k~gaq~l~~ 146 (163)
T KOG3216|consen 124 VVLDWNHRAILLYEKVGAQDLKE 146 (163)
T ss_pred EEeccchhHHHHHHHhCccccce
Confidence 99999999999999999998765
No 10
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.75 E-value=8.8e-17 Score=121.35 Aligned_cols=138 Identities=22% Similarity=0.243 Sum_probs=98.7
Q ss_pred ceEEEeCCcccHHHHHhhhhhccCC-----CCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeee-
Q 026808 23 EIVVREARIEDIWEVAETHCSCFFP-----NYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGS- 96 (233)
Q Consensus 23 ~i~iR~~~~~D~~~i~~l~~~~f~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 96 (233)
+..||+++++|++.|.++..+.|.. .|..+.. ....+....... ........++++.
T Consensus 46 ~~~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--------------~~~~~~~~~~v~~~ 108 (194)
T PRK10975 46 TTGARVATETDIPALRQLAAQAFAQSRFRAPWYAPDD---SGRFYAQWIENA--------------VRGTFDHQCLLLRD 108 (194)
T ss_pred CCCcccCCcccHHHHHHHHHHHhhhccccCccCChhH---HHHHHHHHHHHh--------------hccccCCcEEEEEc
Confidence 5779999999999999999877642 1222211 111122221110 0111112333343
Q ss_pred cCceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCC
Q 026808 97 EDFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCR 176 (233)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~ 176 (233)
.+ ++++|++.+..... ...+|..++|+|+|||+|+|++|++.+++++++.|+.
T Consensus 109 ~~--------------g~~vG~~~l~~~~~-------------~~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~ 161 (194)
T PRK10975 109 AS--------------GQIQGFVTLRELND-------------TDARIGLLAVFPGAQGRGIGARLMQAALNWCQARGLT 161 (194)
T ss_pred CC--------------CCEEEEEEEEecCC-------------CceEEEEEEEChhhcCCCHHHHHHHHHHHHHHHcCCC
Confidence 34 78999988754211 1277888999999999999999999999999999999
Q ss_pred eEEEEeecCChhhHHHHHhCCCEEEecC
Q 026808 177 SIALHCDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 177 ~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
.+.+.+...|.++.+||+|+||+.+++.
T Consensus 162 ~i~l~v~~~N~~a~~~yek~Gf~~~~~~ 189 (194)
T PRK10975 162 RLRVATQMGNLAALRLYIRSGANIESTA 189 (194)
T ss_pred EEEEEeCCCcHHHHHHHHHCCCeEeEEE
Confidence 9999999999999999999999998865
No 11
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.74 E-value=5.9e-17 Score=117.89 Aligned_cols=147 Identities=20% Similarity=0.252 Sum_probs=100.8
Q ss_pred EEeCCcccHHHHHhhhhhccC---CCCCCh-HHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCcee
Q 026808 26 VREARIEDIWEVAETHCSCFF---PNYTFP-LDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKV 101 (233)
Q Consensus 26 iR~~~~~D~~~i~~l~~~~f~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (233)
||+++++|++.|.+++++... ..+... .+.....+.+...... .....+.+...+
T Consensus 1 IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~v~~~~--- 59 (155)
T PF13420_consen 1 IRPATEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDS------------------SKQRLFLVAEED--- 59 (155)
T ss_dssp EEE--GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHH------------------HTTEEEEEEECT---
T ss_pred CCCCcHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhccc------------------CCCcEEEEEEcC---
Confidence 799999999999999985321 111111 1112222223222110 112344444435
Q ss_pred cccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHH-HhcCCCeEEE
Q 026808 102 GGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQA-RGWGCRSIAL 180 (233)
Q Consensus 102 ~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a-~~~g~~~i~l 180 (233)
|+++|++.+..... ....+.+ .+.|.|++|++|+|+.|+..++++| .+.|+..+.+
T Consensus 60 -----------g~iiG~~~~~~~~~-----------~~~~~~~-~~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~ 116 (155)
T PF13420_consen 60 -----------GKIIGYVSLRDIDP-----------YNHTAEL-SIYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYL 116 (155)
T ss_dssp -----------TEEEEEEEEEESSS-----------GTTEEEE-EEEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEE
T ss_pred -----------CcEEEEEEEEeeec-----------cCCEEEE-eeEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEE
Confidence 89999999875322 2234666 5888899999999999999999999 7779999999
Q ss_pred EeecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCc
Q 026808 181 HCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSP 216 (233)
Q Consensus 181 ~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~ 216 (233)
.+.+.|..+++||+++||+.+++.+...+.++++.|
T Consensus 117 ~v~~~N~~~i~~~~~~GF~~~g~~~~~~~~~~~y~D 152 (155)
T PF13420_consen 117 EVFSSNEKAINFYKKLGFEEEGELKDHIFINGKYYD 152 (155)
T ss_dssp EEETT-HHHHHHHHHTTEEEEEEEEEEEEETTEEEE
T ss_pred EEecCCHHHHHHHHhCCCEEEEEEecEEEECCeEEE
Confidence 999999999999999999999998887766666554
No 12
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.74 E-value=9.8e-17 Score=116.40 Aligned_cols=141 Identities=18% Similarity=0.154 Sum_probs=97.1
Q ss_pred EEeCC-cccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceeccc
Q 026808 26 VREAR-IEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGL 104 (233)
Q Consensus 26 iR~~~-~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (233)
||+++ .+|++.|.+++++.....|........+.+.+...+ ..++....+++..+
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l------------------~~~~~~~~~v~~~d------ 56 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQL------------------EADPGHHPYVAEDD------ 56 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHH------------------CHTTTEEEEEEEET------
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhh------------------cccCCceEEEEEEC------
Confidence 79999 999999999998664322211111112223332222 11234566777777
Q ss_pred CCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhc-CCCeEEEEee
Q 026808 105 DGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRSIALHCD 183 (233)
Q Consensus 105 ~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~-g~~~i~l~~~ 183 (233)
|+++|++.+....... ........++.+.|+|++||+|+|+.+++.+++.+++. +++.+.+.+.
T Consensus 57 --------g~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~ 121 (152)
T PF13523_consen 57 --------GEPIGYFEIYWPDEDY-------DADDGDRGIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPH 121 (152)
T ss_dssp --------TEEEEEEEEEEGGGSS----------TTEEEEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEB
T ss_pred --------CEEEEEEEEecccccc-------cCCCCEEEEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecC
Confidence 7899988874422221 12345678889999999999999999999999999988 8999999999
Q ss_pred cCChhhHHHHHhCCCEEEecCC
Q 026808 184 FNNLGATKLYKGQGFKCVKVPE 205 (233)
Q Consensus 184 ~~n~~a~~~y~k~Gf~~~~~~~ 205 (233)
++|.+++++|+|+||+.+++..
T Consensus 122 ~~N~~~~~~~~k~GF~~~g~~~ 143 (152)
T PF13523_consen 122 EDNTRAIRLYEKAGFRKVGEFE 143 (152)
T ss_dssp TT-HHHHHHHHHTT-EEEEEEE
T ss_pred cCCHHHHHHHHHcCCEEeeEEE
Confidence 9999999999999999999764
No 13
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.73 E-value=7.9e-17 Score=117.42 Aligned_cols=126 Identities=21% Similarity=0.230 Sum_probs=91.4
Q ss_pred EEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeee-cCceeccc
Q 026808 26 VREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGS-EDFKVGGL 104 (233)
Q Consensus 26 iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 104 (233)
||+++.+|+++|.+|..+.......... .+ . .. .. ......+++. .+
T Consensus 1 IR~~~~~D~~~i~~L~~~~~~~~~~~~~---~~---~-~~------------------~~-~~~~~~~v~~~~~------ 48 (157)
T TIGR02406 1 FRPPRIEDGAGIWELVKDCPPLDLNSSY---AY---L-LL------------------CT-DFADTSIVAESEG------ 48 (157)
T ss_pred CCCCccccHHHHHHHHHhCCCCCcccce---eh---h-hh------------------hh-hcCCcEEEEEcCC------
Confidence 6899999999999999976432211000 00 0 00 00 1113344554 34
Q ss_pred CCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 105 DGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 105 ~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
++++|++...... .....+++..++|+|+|||+|+|++|+..++++++..++..+.+.|..
T Consensus 49 --------~~ivG~~~~~~~~-----------~~~~~~~i~~l~V~p~~rg~GiG~~L~~~l~~~a~~~~~~~i~~~v~~ 109 (157)
T TIGR02406 49 --------GEIVGFVSGYLRP-----------DRPDVLFVWQVAVDPRARGKGLARRLLEALLERVACERVRHLETTITP 109 (157)
T ss_pred --------CeEEEEEEEEecC-----------CCCCeEEEEEEEEChHhccCcHHHHHHHHHHHHHHhCCCCEEEEEEcC
Confidence 6899987653211 112347888999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHhCCCEEEe
Q 026808 185 NNLGATKLYKGQGFKCVK 202 (233)
Q Consensus 185 ~n~~a~~~y~k~Gf~~~~ 202 (233)
.|.+|++||+|+||+...
T Consensus 110 ~N~~a~~ly~k~G~~~~~ 127 (157)
T TIGR02406 110 DNQASRALFKALARRRGV 127 (157)
T ss_pred CCHHHHHHHHHhCcccCC
Confidence 999999999999997754
No 14
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.73 E-value=1.6e-16 Score=119.97 Aligned_cols=161 Identities=15% Similarity=0.111 Sum_probs=108.4
Q ss_pred CCCCCCceEEEeCCcccHHHHHhhhhh--ccCCCCCChHH-----HHHHHHHHHHHHhcccccCCccceeeeeeecCCCc
Q 026808 17 XXXXSPEIVVREARIEDIWEVAETHCS--CFFPNYTFPLD-----LMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMD 89 (233)
Q Consensus 17 ~~~~~~~i~iR~~~~~D~~~i~~l~~~--~f~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (233)
++..+..+.||+++++|++.+.+++.+ .+...|..... .............. .. ...
T Consensus 11 ~~l~t~rl~LR~~~~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~-~~~ 74 (194)
T PRK10809 11 VRLTTDRLVVRLVHERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEF---------------HK-QGS 74 (194)
T ss_pred eeeccCcEEEEeCCHHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHH---------------Hh-cCc
Confidence 344567899999999999999999885 33333321100 01111111111110 01 111
Q ss_pred cc-eeeeecCceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHH
Q 026808 90 ET-FFLGSEDFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEA 168 (233)
Q Consensus 90 ~~-~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~ 168 (233)
.. +.+...+ +++++|.+.+...... ....++| .++|.|+|||+|+|+++++.+++
T Consensus 75 ~~~~~i~~~~-------------~~~~iG~i~l~~~~~~----------~~~~~ei-g~~i~~~~~G~G~~~ea~~~ll~ 130 (194)
T PRK10809 75 AFYFALLDPD-------------EKEIIGVANFSNVVRG----------SFHACYL-GYSLGQKWQGQGLMFEALQAAIR 130 (194)
T ss_pred EEEEEEEECC-------------CCeEEEEEEEEeecCC----------CeeeEEE-EEEECHHHcCCCHHHHHHHHHHH
Confidence 22 2222221 1789999997643210 1123566 78999999999999999999999
Q ss_pred HHHhc-CCCeEEEEeecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcc
Q 026808 169 QARGW-GCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPD 217 (233)
Q Consensus 169 ~a~~~-g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~ 217 (233)
++++. |+..+.+.|.+.|.+|+++|+|+||+.++..+.....++.+.|.
T Consensus 131 ~~~~~l~l~~i~~~v~~~N~~S~~l~ek~Gf~~~g~~~~~~~~~g~~~d~ 180 (194)
T PRK10809 131 YMQRQQHMHRIMANYMPHNKRSGDLLARLGFEKEGYAKDYLLIDGQWRDH 180 (194)
T ss_pred HHHhcCCceEEEEEeeCCCHHHHHHHHHCCCcEEeeeccccccCCeEEEE
Confidence 99985 99999999999999999999999999999887766666666554
No 15
>PHA00673 acetyltransferase domain containing protein
Probab=99.72 E-value=1.3e-16 Score=113.49 Aligned_cols=135 Identities=13% Similarity=0.024 Sum_probs=96.5
Q ss_pred EeCCcccHHHHHhhhhhccCCCCCChHH--HHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceeccc
Q 026808 27 REARIEDIWEVAETHCSCFFPNYTFPLD--LMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGL 104 (233)
Q Consensus 27 R~~~~~D~~~i~~l~~~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (233)
-.++.+|+++|.+|+.+.-. ....+.. .......+.. +..++...+++++++
T Consensus 10 ~~A~~~D~paI~~LLadd~l-~~~r~d~~~~~~y~~af~a-------------------i~~dp~~~llVa~~~------ 63 (154)
T PHA00673 10 AFAELADAPTFASLCAEYAH-ESANADLAGRAPDHHAYAG-------------------MEAAGVAHFLGVFRG------ 63 (154)
T ss_pred hhccHhhHHHHHHHHHhccc-ccccccccccchhHHHHHH-------------------HHhCCCcEEEEEEEC------
Confidence 35789999999999987211 1111100 0001111222 233566778888877
Q ss_pred CCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 105 DGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 105 ~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
|++||++.+...+.. .......+.|+.++|+|++||+|||++|+++++++++++|+..++++..+
T Consensus 64 --------g~vVG~~~l~~~p~l-------~~~~~~~~~Ie~l~V~~~~RGqGIG~~Ll~~A~~~Ar~~Gc~~lyis~~p 128 (154)
T PHA00673 64 --------EELVGFACLLVTPVP-------HFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPT 128 (154)
T ss_pred --------CEEEEEEEEEEecCC-------ccCCccEEEEEEEEEChhccCCCHHHHHHHHHHHHHHHCCCCEEEEecCC
Confidence 899999887654322 11223458999999999999999999999999999999999999998765
Q ss_pred CChhhHHHHHhCCCEEEec
Q 026808 185 NNLGATKLYKGQGFKCVKV 203 (233)
Q Consensus 185 ~n~~a~~~y~k~Gf~~~~~ 203 (233)
+ ...+.||.++|++...+
T Consensus 129 ~-~~tv~fy~~~g~~~~~~ 146 (154)
T PHA00673 129 E-GRLVQLLPAAGYRETNR 146 (154)
T ss_pred C-ccchHHHHhCCchhhch
Confidence 4 56699999999987654
No 16
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.72 E-value=4e-16 Score=112.93 Aligned_cols=138 Identities=20% Similarity=0.256 Sum_probs=92.6
Q ss_pred CCceEEEeCCcccHH-HHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeec--
Q 026808 21 SPEIVVREARIEDIW-EVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSE-- 97 (233)
Q Consensus 21 ~~~i~iR~~~~~D~~-~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 97 (233)
+..+.||+++++|++ .+..++....... +.+.....+.+..... ......++++++
T Consensus 4 ~~~~~ir~~~~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~ 62 (150)
T PLN02706 4 GEKFKVRRLEISDKSKGFLELLQQLTVVG---DVTEEEFEARFQELAS------------------LGDDHLICVIEDAA 62 (150)
T ss_pred CCceEEeEhhhcccchHHHHHHHhccCCC---CCCHHHHHHHHHHHHh------------------CCCcEEEEEEEeCC
Confidence 356899999999998 5888877542211 1111222222222211 011123344443
Q ss_pred CceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCe
Q 026808 98 DFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRS 177 (233)
Q Consensus 98 ~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~ 177 (233)
+ ++++|++.+....... .......+|..++|+|+|||+|||++|++.++++|++.|+..
T Consensus 63 ~--------------~~ivG~~~~~~~~~~~-------~~~~~~~~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~~g~~~ 121 (150)
T PLN02706 63 S--------------GRIIATGSVFVERKFI-------RNCGKVGHIEDVVVDSAARGKGLGKKIIEALTEHARSAGCYK 121 (150)
T ss_pred C--------------CcEEEEEEEEEEeecc-------cCCCcEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCE
Confidence 3 6888888764211100 011234778889999999999999999999999999999999
Q ss_pred EEEEeecCChhhHHHHHhCCCEEEec
Q 026808 178 IALHCDFNNLGATKLYKGQGFKCVKV 203 (233)
Q Consensus 178 i~l~~~~~n~~a~~~y~k~Gf~~~~~ 203 (233)
+.+.+.+.| .+||+|+||+..+.
T Consensus 122 i~l~~~~~N---~~~y~k~GF~~~g~ 144 (150)
T PLN02706 122 VILDCSEEN---KAFYEKCGYVRKEI 144 (150)
T ss_pred EEEEecccc---HHHHHHCcCEEehh
Confidence 999999888 46999999998763
No 17
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.71 E-value=2.4e-16 Score=117.50 Aligned_cols=156 Identities=12% Similarity=0.157 Sum_probs=108.5
Q ss_pred CCCceEEEeCCcccHHHHHhhhhhc--cC---CCCCCh-HHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCcccee
Q 026808 20 XSPEIVVREARIEDIWEVAETHCSC--FF---PNYTFP-LDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFF 93 (233)
Q Consensus 20 ~~~~i~iR~~~~~D~~~i~~l~~~~--f~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (233)
.++.+.||+++++|++.+.+++++. .. ..|+.+ .+.....+.+....... .......+
T Consensus 7 ~t~rl~Lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------------~~~~~~~~ 70 (179)
T PRK10151 7 VSESLELHAVDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLH----------------QRGYAKMF 70 (179)
T ss_pred eCCcEEEEeCCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHH----------------hcCCcEEE
Confidence 3567999999999999999998422 11 122221 12222233332221110 01112234
Q ss_pred eeecCceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhc
Q 026808 94 LGSEDFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW 173 (233)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~ 173 (233)
++..+ ++++|++.+...... ...++| .+.++|+|||+|+|+++++.+++++++.
T Consensus 71 ~i~~~--------------~~~iG~~~l~~~~~~-----------~~~~~i-g~~i~~~~~g~G~~tea~~~l~~~~~~~ 124 (179)
T PRK10151 71 MIFKE--------------DELIGVLSFNRIEPL-----------NKTAYI-GYWLDESHQGQGIISQALQALIHHYAQS 124 (179)
T ss_pred EEEEC--------------CEEEEEEEEEeeccC-----------CCceEE-EEEEChhhcCCcHHHHHHHHHHHHHHhh
Confidence 44445 789999987543111 123677 6789999999999999999999999875
Q ss_pred -CCCeEEEEeecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcc
Q 026808 174 -GCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPD 217 (233)
Q Consensus 174 -g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~ 217 (233)
++.++.+.+.+.|.+|.++|+|+||+.+++.....+.++.+.|.
T Consensus 125 ~~~~ri~~~v~~~N~~S~~v~ek~Gf~~~g~~~~~~~~~g~~~D~ 169 (179)
T PRK10151 125 GELRRFVIKCRVDNPASNQVALRNGFTLEGCLKQAEYLNGAYDDV 169 (179)
T ss_pred CCccEEEEEEcCCCHHHHHHHHHCCCEEEeEeccceEECCEEEEE
Confidence 89999999999999999999999999999988777777776653
No 18
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.70 E-value=3.8e-16 Score=109.77 Aligned_cols=127 Identities=20% Similarity=0.275 Sum_probs=87.4
Q ss_pred EEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceeccc
Q 026808 25 VVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGL 104 (233)
Q Consensus 25 ~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (233)
.||+++++|.+++.+|++.+|......+ .......... .....+++.++
T Consensus 1 ~iR~~~~~d~~~i~~l~~~~F~~~~~~~----~~~~~~~~~~---------------------~~~~~~~~~~~------ 49 (127)
T PF13527_consen 1 EIRPLTESDFEQIIELFNEAFGDSESPP----EIWEYFRNLY---------------------GPGRCVVAEDD------ 49 (127)
T ss_dssp -EEEE-GGGHHHHHHHHHHHTTT-CHHH----HHHHHHHHHH---------------------HTTEEEEEEET------
T ss_pred CceECCHHHHHHHHHHHHHHCCCCCCch----hhhhhhhccc---------------------CcCcEEEEEEC------
Confidence 4899999999999999999996554322 0111111221 12456667677
Q ss_pred CCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 105 DGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 105 ~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
+++||++.+....-.. ....-+..+|..++|+|+|||+|+|++|++.+++.+++.|+..+.+..
T Consensus 50 --------~~ivg~~~~~~~~~~~------~g~~~~~~~i~~v~v~p~~R~~Gl~~~L~~~~~~~~~~~g~~~~~l~~-- 113 (127)
T PF13527_consen 50 --------GKIVGHVGLIPRRLSV------GGKKFKAAYIGDVAVDPEYRGRGLGRQLMRALLERARERGVPFIFLFP-- 113 (127)
T ss_dssp --------TEEEEEEEEEEEEEEE------TTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTT-SEEEEE---
T ss_pred --------CEEEEEEEEEEEEEEE------CCEEEEEEEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCEEEEec--
Confidence 7888888865432111 112224589999999999999999999999999999999998777755
Q ss_pred CChhhHHHHHhCCCEEE
Q 026808 185 NNLGATKLYKGQGFKCV 201 (233)
Q Consensus 185 ~n~~a~~~y~k~Gf~~~ 201 (233)
....||+++||+.+
T Consensus 114 ---~~~~~Y~~~G~~~~ 127 (127)
T PF13527_consen 114 ---SSPPFYRRFGFEYA 127 (127)
T ss_dssp ---SSHHHHHHTTEEEE
T ss_pred ---CChhhhhcCCCEEC
Confidence 23799999999864
No 19
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.69 E-value=1e-15 Score=113.76 Aligned_cols=161 Identities=25% Similarity=0.334 Sum_probs=108.0
Q ss_pred CCceEEEeCCcccHH--HHHhhhhhccCC--CCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeee
Q 026808 21 SPEIVVREARIEDIW--EVAETHCSCFFP--NYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGS 96 (233)
Q Consensus 21 ~~~i~iR~~~~~D~~--~i~~l~~~~f~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (233)
...+.+|+++..|+. .+..+....|.. .|... .+...+. .....++++.
T Consensus 9 ~~~~~ir~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~-------------------~~~~~~~v~~ 61 (177)
T COG0456 9 EDKVTIREAINKDLLDVALAALEARTFDIRLPWSRE--------YFEKDLT-------------------QAPELLLVAE 61 (177)
T ss_pred ccceehhhhhhcccchHHHHHHhhhcCCCCCcchHH--------HHHHHHh-------------------hCcceeEEEE
Confidence 345789999999999 888888888863 33221 1222211 1223344443
Q ss_pred cCceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCC-
Q 026808 97 EDFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGC- 175 (233)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~- 175 (233)
.++ ..+.. .++++|++........... ...++|..++|+|+|||+|||++|++.+++.+.+.+.
T Consensus 62 ~~~-~~~~~------~~~~~G~~~~~~~~~~~~~--------~~~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~ 126 (177)
T COG0456 62 TGG-LDGLL------DGKVVGFLLVRVVDGRPSA--------DHEGHIYNLAVDPEYRGRGIGRALLDEALERLRERGLA 126 (177)
T ss_pred ecc-cCCCc------ccceeEEEEEEEecCCccc--------cCccEEEEEEEChHhhcCCHHHHHHHHHHHHHHhcCCC
Confidence 321 00000 0158888887521111000 2248999999999999999999999999999999986
Q ss_pred CeEEEEeecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcchhHHHHHhhhc
Q 026808 176 RSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLK 228 (233)
Q Consensus 176 ~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~~~~~~m~k~l~ 228 (233)
..+.|.|..+|.+|++||+++||+.+++.++++ .++.. ....|.+.+.
T Consensus 127 ~~~~L~V~~~N~~Ai~lY~~~GF~~~~~~~~yy-~~~~~----~a~~~~~~~~ 174 (177)
T COG0456 127 DKIVLEVRESNEAAIGLYRKLGFEVVKIRKNYY-ADGNG----DALLMLKMLN 174 (177)
T ss_pred ceEEEEEecCChHHHHHHHHcCCEEEeeehhhc-cCCcc----hhHHHHHhhh
Confidence 899999999999999999999999999887653 22221 2456655543
No 20
>PRK10514 putative acetyltransferase; Provisional
Probab=99.69 E-value=1.2e-15 Score=109.74 Aligned_cols=126 Identities=17% Similarity=0.200 Sum_probs=86.5
Q ss_pred eEEEeCCcccHHHHHhhhhhccCC--CCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCcee
Q 026808 24 IVVREARIEDIWEVAETHCSCFFP--NYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKV 101 (233)
Q Consensus 24 i~iR~~~~~D~~~i~~l~~~~f~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (233)
+.||+++++|++.|.++..+++.. .+..+.. .+.+......+. . ....+++...+
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--------------~--~~~~~~~~~~~--- 58 (145)
T PRK10514 2 ISIRRSRHEEGERLVAIWRRSVDATHDFLSAED----RAEIEELVRSFL--------------P--EAPLWVAVDER--- 58 (145)
T ss_pred ceeeecchhhHHHHHHHHHHHHHHhCcccCchh----HHHHHHHHHHHh--------------c--cCceEEEEecC---
Confidence 679999999999999999865421 1111111 111111111110 0 01222322344
Q ss_pred cccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEE
Q 026808 102 GGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALH 181 (233)
Q Consensus 102 ~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~ 181 (233)
++++|++.+.. .++..++|+|+|||+|+|++|++++++.+ ..+.+.
T Consensus 59 -----------~~~iG~~~~~~------------------~~~~~~~v~p~~rgkGig~~Ll~~~~~~~-----~~i~~~ 104 (145)
T PRK10514 59 -----------DQPVGFMLLSG------------------GHMEALFVDPDVRGCGVGRMLVEHALSLH-----PELTTD 104 (145)
T ss_pred -----------CcEEEEEEEec------------------CcEeEEEECHHhccCCHHHHHHHHHHHhc-----cccEEE
Confidence 78999888642 34557899999999999999999999864 357788
Q ss_pred eecCChhhHHHHHhCCCEEEecCCC
Q 026808 182 CDFNNLGATKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 182 ~~~~n~~a~~~y~k~Gf~~~~~~~~ 206 (233)
+...|.++++||+|+||+..++...
T Consensus 105 v~~~N~~a~~~yek~Gf~~~~~~~~ 129 (145)
T PRK10514 105 VNEQNEQAVGFYKKMGFKVTGRSEV 129 (145)
T ss_pred eecCCHHHHHHHHHCCCEEeccccc
Confidence 9999999999999999999987653
No 21
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.68 E-value=5.9e-16 Score=100.49 Aligned_cols=79 Identities=29% Similarity=0.498 Sum_probs=70.3
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
+++||++.+....... ...+.++|..++|+|+|||+|||+.|++++++.+++.|+..+.+.+...|..+.+|
T Consensus 5 ~~ivg~~~~~~~~~~~--------~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~~g~~~i~~~~~~~n~~~~~~ 76 (83)
T PF00583_consen 5 GQIVGFASLRPPPEPF--------DHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARKRGIKRIYLDVSPDNPAARRF 76 (83)
T ss_dssp TEEEEEEEEEEEETTT--------TTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHHTTESEEEEEEETTGHHHHHH
T ss_pred CEEEEEEEEEECCCcc--------ccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHhcCccEEEEEEeCCCHHHHHH
Confidence 8999999986643221 11466999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCE
Q 026808 193 YKGQGFK 199 (233)
Q Consensus 193 y~k~Gf~ 199 (233)
|+|+||+
T Consensus 77 ~~k~Gf~ 83 (83)
T PF00583_consen 77 YEKLGFE 83 (83)
T ss_dssp HHHTTEE
T ss_pred HHHcCCC
Confidence 9999996
No 22
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=99.68 E-value=5.1e-16 Score=108.74 Aligned_cols=69 Identities=33% Similarity=0.459 Sum_probs=65.5
Q ss_pred eeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCCCCC
Q 026808 141 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGANW 209 (233)
Q Consensus 141 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~ 209 (233)
.++|..++|+++|||+|||++|++.+++.++.+|+..+.|++..+|.+|.++|+++||+..++...+++
T Consensus 84 rgyi~mLaV~~e~Rg~GIg~aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~sLGF~r~~r~~~YYl 152 (165)
T KOG3139|consen 84 RGYIAMLAVDSEYRGQGIGKALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYESLGFKRDKRLFRYYL 152 (165)
T ss_pred eEEEEEEEechhhccccHHHHHHHHHHHHHHHCCCcEEEEeccccchHHHHHHHhcCceEecceeEEEE
Confidence 499999999999999999999999999999999999999999999999999999999999988877654
No 23
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.68 E-value=3e-16 Score=117.69 Aligned_cols=155 Identities=16% Similarity=0.150 Sum_probs=106.0
Q ss_pred CceEEEeCCcccHHHHHhhhhhccC-CCCCC-hH-HHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecC
Q 026808 22 PEIVVREARIEDIWEVAETHCSCFF-PNYTF-PL-DLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSED 98 (233)
Q Consensus 22 ~~i~iR~~~~~D~~~i~~l~~~~f~-~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (233)
..+.||+++++|++.+.++..+... ..|.. +. .+....+.+.... . .+....+++..+
T Consensus 5 ~~l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~-~~~~~~~~i~~~ 65 (186)
T PRK15130 5 HSVKLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHI------------------H-DQSERRFVVECD 65 (186)
T ss_pred CeeEEecCCHHHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhh------------------h-cccCcEEEEEEC
Confidence 4589999999999999998764421 11111 10 0111111111110 0 112234444455
Q ss_pred ceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhc-CCCe
Q 026808 99 FKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRS 177 (233)
Q Consensus 99 ~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~-g~~~ 177 (233)
++++|++.+...... ...+.+ .++|+|+|||+|+|++++..+++++++. ++..
T Consensus 66 --------------g~~iG~~~~~~~~~~-----------~~~~~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~r 119 (186)
T PRK15130 66 --------------GEKAGLVELVEINHV-----------HRRAEF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYK 119 (186)
T ss_pred --------------CEEEEEEEEEeecCC-----------CCeEEE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceE
Confidence 799999987543111 122555 6899999999999999999999999875 9999
Q ss_pred EEEEeecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcchhHH
Q 026808 178 IALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFK 221 (233)
Q Consensus 178 i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~~~~~ 221 (233)
+.+.|...|.+|+++|+|+||+.++..+.....++.+.|...+.
T Consensus 120 v~~~v~~~N~~s~~~yek~GF~~~~~~~~~~~~~g~~~d~~~~~ 163 (186)
T PRK15130 120 LYLIVDKENEKAIHIYRKLGFEVEGELIHEFFINGEYRNTIRMC 163 (186)
T ss_pred EEEEEccCCHHHHHHHHHCCCEEEEEEeheEEECCEEEEEEEEE
Confidence 99999999999999999999999998876666666666654443
No 24
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.67 E-value=2.7e-15 Score=105.68 Aligned_cols=81 Identities=31% Similarity=0.489 Sum_probs=71.4
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
++++|++.+.... ...++..++|+|+|||+|+|++|++.++++++..++..+++.+.+.|..+.+|
T Consensus 40 ~~~vg~~~~~~~~--------------~~~~i~~~~v~~~~rg~G~g~~ll~~~~~~~~~~~~~~i~~~~~~~n~~~~~~ 105 (131)
T TIGR01575 40 GKVVGYAGVQIVL--------------DEAHILNIAVKPEYQGQGIGRALLRELIDEAKGRGVNEIFLEVRVSNIAAQAL 105 (131)
T ss_pred CeEEEEEEEEecC--------------CCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCeEEEEEecccHHHHHH
Confidence 7889998865321 12678899999999999999999999999999989999999999999999999
Q ss_pred HHhCCCEEEecCCCC
Q 026808 193 YKGQGFKCVKVPEGA 207 (233)
Q Consensus 193 y~k~Gf~~~~~~~~~ 207 (233)
|+++||+.++....+
T Consensus 106 y~~~Gf~~~~~~~~~ 120 (131)
T TIGR01575 106 YKKLGFNEIAIRRNY 120 (131)
T ss_pred HHHcCCCcccccccc
Confidence 999999999987764
No 25
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.67 E-value=2.2e-15 Score=111.04 Aligned_cols=123 Identities=20% Similarity=0.269 Sum_probs=88.1
Q ss_pred CceEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeee-cCce
Q 026808 22 PEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGS-EDFK 100 (233)
Q Consensus 22 ~~i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 100 (233)
+++.||+++++|.+.|.++......+....+.. ....+. ....++++. .+
T Consensus 4 ~~i~iR~a~~~D~~~i~~L~~~~~~~~~~~~~~-------~~~~~~--------------------~~~~~~va~~~~-- 54 (169)
T PRK07922 4 GAITVRRARTSDVPAIKRLVDPYAQGRILLEKN-------LVTLYE--------------------AVQEFWVAEHLD-- 54 (169)
T ss_pred CCceeecCCHhhHHHHHHHHHHHhhcCccccch-------HHHHHh--------------------hcCcEEEEEecC--
Confidence 458999999999999999987643222211110 001111 012344555 55
Q ss_pred ecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEE
Q 026808 101 VGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIAL 180 (233)
Q Consensus 101 ~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l 180 (233)
++++|++.+.... ...+.|..++|+|+|||+|+|++|++++++++++.|++.+.+
T Consensus 55 ------------~~iiG~~~~~~~~-------------~~~~~i~~l~V~p~~rgkGiG~~Ll~~~~~~a~~~g~~~l~~ 109 (169)
T PRK07922 55 ------------GEVVGCGALHVMW-------------EDLAEIRTVAVDPAARGRGVGHAIVERLLDVARELGLSRVFV 109 (169)
T ss_pred ------------CcEEEEEEEeecC-------------CCceEEEEEEECHHHhCCCHHHHHHHHHHHHHHHcCCCEEEE
Confidence 7899988764321 123788889999999999999999999999999999999987
Q ss_pred EeecCChhhHHHHHhCCCEEEec
Q 026808 181 HCDFNNLGATKLYKGQGFKCVKV 203 (233)
Q Consensus 181 ~~~~~n~~a~~~y~k~Gf~~~~~ 203 (233)
.+. +.+||+|+||+.++.
T Consensus 110 ~~~-----~~~fY~k~GF~~~~~ 127 (169)
T PRK07922 110 LTF-----EVEFFARHGFVEIDG 127 (169)
T ss_pred Eec-----cHHHHHHCCCEECcc
Confidence 654 278999999998763
No 26
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=99.66 E-value=2.4e-15 Score=104.54 Aligned_cols=151 Identities=23% Similarity=0.335 Sum_probs=109.9
Q ss_pred eEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceecc
Q 026808 24 IVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGG 103 (233)
Q Consensus 24 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (233)
+.||.++++|+-.+......+.++.+. +..++.. ..+.+...+|+++.
T Consensus 2 m~iR~ar~~DL~~mQ~~Nl~~lpENyq-----------mkyylyh----------------~lswp~lSyVA~D~----- 49 (193)
T KOG3235|consen 2 MNIRRARPDDLLEMQHCNLLNLPENYQ-----------MKYYLYH----------------GLSWPQLSYVAEDE----- 49 (193)
T ss_pred cccccCCHHHHHHhhhcccccCcHHHh-----------HHHHHHh----------------hcccccceEEEEcC-----
Confidence 679999999998877766555533321 1112111 01344667777754
Q ss_pred cCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhc-CCCeEEEEe
Q 026808 104 LDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRSIALHC 182 (233)
Q Consensus 104 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~-g~~~i~l~~ 182 (233)
+|+|||++...-..+ |.. ....++|..++|...||+.|||+.||.+......+- +...+.|+|
T Consensus 50 --------~gkiVGYvlAkmee~--p~~------~~~hGhItSlaV~rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHV 113 (193)
T KOG3235|consen 50 --------NGKIVGYVLAKMEED--PDD------EPPHGHITSLAVKRSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHV 113 (193)
T ss_pred --------CCcEEEEeeeehhhc--ccC------CCCCCeeEEeeehhhHHHhhHHHHHHHHHHHHHHHhhcceEEEEee
Confidence 289999987653221 111 112388999999999999999999999988777665 888999999
Q ss_pred ecCChhhHHHHH-hCCCEEEecCCCCCCCCCCCCcchhHHHHHhhhc
Q 026808 183 DFNNLGATKLYK-GQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLK 228 (233)
Q Consensus 183 ~~~n~~a~~~y~-k~Gf~~~~~~~~~~~~~~~~~~~~~~~~m~k~l~ 228 (233)
..+|.+|+.+|+ .+||++.+..+.+ +.++...+.|.|.|.
T Consensus 114 R~SNraAl~LY~~tl~F~v~eve~kY------YadGedAyaM~~~L~ 154 (193)
T KOG3235|consen 114 RKSNRAALHLYKNTLGFVVCEVEPKY------YADGEDAYAMRKDLS 154 (193)
T ss_pred ecccHHHHHhhhhccceEEeeccccc------ccccHHHHHHHHHHH
Confidence 999999999999 8999998876544 466777899998884
No 27
>PRK07757 acetyltransferase; Provisional
Probab=99.66 E-value=3.7e-15 Score=108.10 Aligned_cols=122 Identities=21% Similarity=0.404 Sum_probs=87.4
Q ss_pred eEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceecc
Q 026808 24 IVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGG 103 (233)
Q Consensus 24 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (233)
+.||+++++|++.+.++..+.....+..+... +. .... + ..++++..+
T Consensus 2 ~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~----~~---~~~~---------------~-----~~~~i~~~~----- 49 (152)
T PRK07757 2 MEIRKARLSDVKAIHALINVYAKKGLMLPRSL----DE---LYEN---------------I-----RDFYVAEEE----- 49 (152)
T ss_pred ceEeeCCcccHHHHHHHHHHHHhcCCccCCCH----HH---HHhc---------------c-----CcEEEEEEC-----
Confidence 68999999999999999886543232211110 01 1000 0 124455555
Q ss_pred cCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEee
Q 026808 104 LDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCD 183 (233)
Q Consensus 104 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~ 183 (233)
++++|++.+.... .+.++|..++|+|+|||+|+|++|+..+++.+.+.|+..+.+.+.
T Consensus 50 ---------~~lvG~~~l~~~~-------------~~~~~i~~v~V~p~~rg~Glg~~Ll~~l~~~a~~~g~~~i~~~~~ 107 (152)
T PRK07757 50 ---------GEIVGCCALHILW-------------EDLAEIRSLAVSEDYRGQGIGRMLVEACLEEARELGVKRVFALTY 107 (152)
T ss_pred ---------CEEEEEEEEEecc-------------CCceEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 7899999875311 123688899999999999999999999999999889988876543
Q ss_pred cCChhhHHHHHhCCCEEEecC
Q 026808 184 FNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 184 ~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
+.+||+|+||+..+..
T Consensus 108 -----~~~~Y~k~GF~~~~~~ 123 (152)
T PRK07757 108 -----QPEFFEKLGFREVDKE 123 (152)
T ss_pred -----cHHHHHHCCCEEcccc
Confidence 3689999999998764
No 28
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.65 E-value=8.4e-15 Score=126.04 Aligned_cols=137 Identities=15% Similarity=0.182 Sum_probs=98.3
Q ss_pred CceEEEeC-CcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCce
Q 026808 22 PEIVVREA-RIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFK 100 (233)
Q Consensus 22 ~~i~iR~~-~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (233)
..+.||++ .++|++.|.+|+.++...++... . +...+ ......++++.++
T Consensus 81 ~g~~IR~~~~~~D~~~I~~L~~~~~~~p~~~~----~----~~~~~-------------------~~~~~~~~vA~~~-- 131 (547)
T TIGR03103 81 RGFTVRRLRGPADVDAINRLYAARGMVPVRVD----F----VLDHR-------------------HSRAITYLVAEDE-- 131 (547)
T ss_pred CCcEEEeCCChhHHHHHHHHHHhcCCCCCCHH----H----HHHHh-------------------cCCCceEEEEEEC--
Confidence 45899997 68999999999998753332211 1 11110 0122345555531
Q ss_pred ecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEE
Q 026808 101 VGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIAL 180 (233)
Q Consensus 101 ~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l 180 (233)
.+++++|++......... . ...+..+|..++|+|+|||+|||++|++.+++++++.|+..+.+
T Consensus 132 ----------~~g~IVG~~~~~~~~~~~------~-d~~~~~~i~~l~V~P~~Rg~GIG~~Ll~~l~e~a~~~G~~~i~L 194 (547)
T TIGR03103 132 ----------ASGAIIGTVMGVDHRKAF------N-DPEHGSSLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDL 194 (547)
T ss_pred ----------CCCeEEEEEEEEeccccc------c-CCCCCeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEE
Confidence 017899998753221111 0 11123678899999999999999999999999999999999999
Q ss_pred EeecCChhhHHHHHhCCCEEEecC
Q 026808 181 HCDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 181 ~~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
.|..+|.+|++||+|+||+.+...
T Consensus 195 ~V~~~N~~Ai~fY~klGf~~~~~y 218 (547)
T TIGR03103 195 SVMHDNEQAIALYEKLGFRRIPVF 218 (547)
T ss_pred EEcCCCHHHHHHHHHCCCEEeeEE
Confidence 999999999999999999988653
No 29
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.64 E-value=7.9e-15 Score=99.40 Aligned_cols=137 Identities=21% Similarity=0.213 Sum_probs=98.4
Q ss_pred ceEEEeCCcccHHH-HHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCcee
Q 026808 23 EIVVREARIEDIWE-VAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKV 101 (233)
Q Consensus 23 ~i~iR~~~~~D~~~-i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (233)
.+.||++..+|... ..+++.+--....-.+ ++...++..+.+. .++....|+++.
T Consensus 6 ~~~lR~L~~~D~~kGf~elL~qLT~vG~vt~---e~F~krf~~mk~~------------------~~~Y~i~Vied~--- 61 (150)
T KOG3396|consen 6 GFKLRPLEEDDYGKGFIELLKQLTSVGVVTR---EQFEKRFEAMKKS------------------GDWYYIVVIEDK--- 61 (150)
T ss_pred ceEEeecccccccchHHHHHHHHhhccccCH---HHHHHHHHHHHhc------------------CCcEEEEEEEeC---
Confidence 38999999999986 6666664432222122 4444555555331 111233333332
Q ss_pred cccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEE
Q 026808 102 GGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALH 181 (233)
Q Consensus 102 ~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~ 181 (233)
..++++|.+.+.....+....+. .++|..+.|+++|||+++|+.|+..+...++..|+..+.|+
T Consensus 62 ---------~s~~vigtatL~IE~KfIh~~g~-------rGhiEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~Ld 125 (150)
T KOG3396|consen 62 ---------ESEKVIGTATLFIERKFIHGCGS-------RGHIEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILD 125 (150)
T ss_pred ---------CcCeEEEEEEEEEehhhhhcccc-------cCceeEEEeChhhhhhHHhHHHHHHHHHHHHhcCcEEEEEe
Confidence 13899999887554444444332 28999999999999999999999999999999999999999
Q ss_pred eecCChhhHHHHHhCCCEEEe
Q 026808 182 CDFNNLGATKLYKGQGFKCVK 202 (233)
Q Consensus 182 ~~~~n~~a~~~y~k~Gf~~~~ 202 (233)
|.+.| +.||+|+||+..+
T Consensus 126 C~~~n---v~FYeKcG~s~~~ 143 (150)
T KOG3396|consen 126 CDPKN---VKFYEKCGYSNAG 143 (150)
T ss_pred cchhh---hhHHHHcCccccc
Confidence 99877 9999999998765
No 30
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.64 E-value=1.7e-15 Score=110.18 Aligned_cols=147 Identities=14% Similarity=0.100 Sum_probs=101.8
Q ss_pred EEEeCCcccHHHHHhhhhhccCCCCCC--h-HHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCcee
Q 026808 25 VVREARIEDIWEVAETHCSCFFPNYTF--P-LDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKV 101 (233)
Q Consensus 25 ~iR~~~~~D~~~i~~l~~~~f~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (233)
.|||++++|++.+.++.++.....+.. + .+.......+... ..++...++++..+
T Consensus 2 ~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~--- 59 (156)
T TIGR03585 2 NFTPLNSEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEAL-------------------KQDPNRRYWIVCQE--- 59 (156)
T ss_pred CcccCCHHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHh-------------------hcCCCceEEEEEEC---
Confidence 489999999999999887432222211 1 1111111111111 11122345555555
Q ss_pred cccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhc-CCCeEEE
Q 026808 102 GGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRSIAL 180 (233)
Q Consensus 102 ~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~-g~~~i~l 180 (233)
|++||++.+..... ..+.+.+ .+++.|++| +|+|++++..+++++++. ++..+.+
T Consensus 60 -----------g~~vG~~~~~~~~~-----------~~~~~~~-g~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~ 115 (156)
T TIGR03585 60 -----------SRPIGVISFTDINL-----------VHKSAFW-GIYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSL 115 (156)
T ss_pred -----------CEEEEEEEEEecCh-----------hhCeEEE-EEEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEE
Confidence 79999988864321 0122555 456999999 999999999999999975 9999999
Q ss_pred EeecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcc
Q 026808 181 HCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPD 217 (233)
Q Consensus 181 ~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~ 217 (233)
.|...|.+|++||+|+||+.++....+...++.+.|.
T Consensus 116 ~v~~~N~~s~~~y~k~Gf~~~g~~~~~~~~~g~~~d~ 152 (156)
T TIGR03585 116 EVLEFNNKALKLYEKFGFEREGVFRQGIFKEGEYYDV 152 (156)
T ss_pred EEeccCHHHHHHHHHcCCeEeeeehhheeECCeEEEE
Confidence 9999999999999999999999888776666666553
No 31
>PRK09831 putative acyltransferase; Provisional
Probab=99.63 E-value=2.8e-15 Score=108.12 Aligned_cols=128 Identities=14% Similarity=0.185 Sum_probs=84.4
Q ss_pred eEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceecc
Q 026808 24 IVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGG 103 (233)
Q Consensus 24 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (233)
+.||+++++|++.+.++..+.+............ ... +. ..... .+...+ ....++++..+
T Consensus 1 ~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~-~~~---~~-~~~~~------~~~~~~---~~~~~~v~~~~----- 61 (147)
T PRK09831 1 IQIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQ-IAA---WA-QIDES------RWKEKL---AKSQVRVAVIN----- 61 (147)
T ss_pred CccccCChhhHHHHHHHHHHHHHHhhhhcCCHHH-HHh---cc-CCCHH------HHHHHH---hcCceEEEEEC-----
Confidence 3689999999999999999765432211111000 010 00 00000 000001 12346666666
Q ss_pred cCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEee
Q 026808 104 LDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCD 183 (233)
Q Consensus 104 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~ 183 (233)
++++|++.+.. .++..++|+|+|||+|+|++|++.+++.+.. +. +.
T Consensus 62 ---------~~iiG~~~~~~------------------~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~-----l~--v~ 107 (147)
T PRK09831 62 ---------AQPVGFITCIE------------------HYIDMLFVDPEYTRRGVASALLKPLIKSESE-----LT--VD 107 (147)
T ss_pred ---------CEEEEEEEehh------------------ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh-----eE--ee
Confidence 79999887632 4677899999999999999999999998864 33 33
Q ss_pred cCChhhHHHHHhCCCEEEecCC
Q 026808 184 FNNLGATKLYKGQGFKCVKVPE 205 (233)
Q Consensus 184 ~~n~~a~~~y~k~Gf~~~~~~~ 205 (233)
. |..+++||+|+||+.+++.+
T Consensus 108 ~-~~~a~~~Y~k~Gf~~~g~~~ 128 (147)
T PRK09831 108 A-SITAKPFFERYGFQTVKQQR 128 (147)
T ss_pred c-chhhHHHHHHCCCEEeeccc
Confidence 3 47899999999999999865
No 32
>PRK10314 putative acyltransferase; Provisional
Probab=99.63 E-value=2.5e-15 Score=108.81 Aligned_cols=137 Identities=15% Similarity=0.255 Sum_probs=96.3
Q ss_pred EeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCC---CccceeeeecCceecc
Q 026808 27 REARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSR---MDETFFLGSEDFKVGG 103 (233)
Q Consensus 27 R~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 103 (233)
..++..++..+..|..+.|..+...+.. +++.. +....+++..+
T Consensus 10 ~~l~~~~~~~~~~lR~~VF~~eq~~~~~----------------------------e~D~~d~~~~~~h~~~~~~----- 56 (153)
T PRK10314 10 SELSVSQLYALLQLRCAVFVVEQNCPYQ----------------------------DIDGDDLTGDNRHILGWKN----- 56 (153)
T ss_pred hhCCHHHHHHHHHHHHHHhhhhcCCCcc----------------------------ccCCCCCCCCcEEEEEEEC-----
Confidence 4456677788888888888765544410 01111 12344555556
Q ss_pred cCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhc-CCCeEEEEe
Q 026808 104 LDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRSIALHC 182 (233)
Q Consensus 104 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~-g~~~i~l~~ 182 (233)
++++|++.+....+ ....++|..++|+|+|||+|+|++||+.+++.+++. +...+.+.+
T Consensus 57 ---------~~~vg~~r~~~~~~-----------~~~~~~i~rv~V~~~~rG~GiG~~Lm~~~~~~~~~~~~~~~i~L~a 116 (153)
T PRK10314 57 ---------DELVAYARILKSDD-----------DLEPVVIGRVIVSEALRGEKVGQQLMSKTLESCTRHWPDKPVYLGA 116 (153)
T ss_pred ---------CEEEEEEEEecCCC-----------CCCCEEEEEEEECHHHhCCCHHHHHHHHHHHHHHHHCCCCcEEEeh
Confidence 78999988754211 111378999999999999999999999999999876 677788876
Q ss_pred ecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcchhHHHHHhhh
Q 026808 183 DFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLL 227 (233)
Q Consensus 183 ~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~~~~~~m~k~l 227 (233)
. ..+..||+|+||+.++.. | ..+++....|.|.+
T Consensus 117 ~---~~a~~fY~k~GF~~~g~~----f----~~~Gi~h~~M~~~~ 150 (153)
T PRK10314 117 Q---AHLQNFYQSFGFIPVTEV----Y----EEDGIPHIGMAREV 150 (153)
T ss_pred H---HHHHHHHHHCCCEECCCc----c----ccCCCCcHhhhhhh
Confidence 4 667899999999988853 1 23355678888765
No 33
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.63 E-value=9.2e-15 Score=102.53 Aligned_cols=123 Identities=22% Similarity=0.341 Sum_probs=94.1
Q ss_pred EEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceeccc
Q 026808 25 VVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGL 104 (233)
Q Consensus 25 ~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (233)
.||.|+.+|++.|.+|...........+.+ .+.+.... .-+++++.+
T Consensus 2 ~iR~A~~~Di~~I~~Li~~~~~~gil~~rs----~~~le~~i-----------------------~dF~i~E~~------ 48 (153)
T COG1246 2 QIRKARISDIPAILELIRPLELQGILLRRS----REQLEEEI-----------------------DDFTIIERD------ 48 (153)
T ss_pred ceeeccccchHHHHHHHHHHhhccccchhh----HHHHHHHH-----------------------hhheeeeeC------
Confidence 689999999999999999765443322221 12222222 334555566
Q ss_pred CCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 105 DGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 105 ~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
|.++||+...+. ..++.+.+..++|+|+|||+|+|..|+..++..|++.|++.+++.+.
T Consensus 49 --------g~viGC~aL~~~------------~~~~~gE~~~laV~pd~r~~G~G~~Ll~~~~~~Ar~~gi~~lf~LTt- 107 (153)
T COG1246 49 --------GKVIGCAALHPV------------LEEDLGELRSLAVHPDYRGSGRGERLLERLLADARELGIKELFVLTT- 107 (153)
T ss_pred --------CcEEEEEeeccc------------CccCeeeEEEEEECHHhcCCCcHHHHHHHHHHHHHHcCCceeeeeec-
Confidence 899999997631 12244899999999999999999999999999999999999988763
Q ss_pred CChhhHHHHHhCCCEEEecC
Q 026808 185 NNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 185 ~n~~a~~~y~k~Gf~~~~~~ 204 (233)
.+..||+++||+.+...
T Consensus 108 ---~~~~~F~~~GF~~vd~~ 124 (153)
T COG1246 108 ---RSPEFFAERGFTRVDKD 124 (153)
T ss_pred ---ccHHHHHHcCCeECccc
Confidence 56889999999998763
No 34
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.61 E-value=1.6e-14 Score=99.92 Aligned_cols=74 Identities=30% Similarity=0.552 Sum_probs=61.2
Q ss_pred cceeeeecCceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHH
Q 026808 90 ETFFLGSEDFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQ 169 (233)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~ 169 (233)
..+++++.+ ++++|++.+... .+|..++|+|+|||+|||++|++.+++.
T Consensus 44 ~~~~v~~~~--------------~~ivG~~~~~~~-----------------~~i~~l~v~p~~r~~Gig~~Ll~~~~~~ 92 (117)
T PF13673_consen 44 HTIFVAEEG--------------GEIVGFAWLEPD-----------------GEISHLYVLPEYRGRGIGRALLDAAEKE 92 (117)
T ss_dssp CEEEEEEET--------------TEEEEEEEEETC-----------------EEEEEEEE-GGGTTSSHHHHHHHHHHHH
T ss_pred CEEEEEEEC--------------CEEEEEEEEcCC-----------------CeEEEEEEChhhcCCcHHHHHHHHHHHH
Confidence 567888888 899999997521 4588999999999999999999999999
Q ss_pred HHhcCCCeEEEEeecCChhhHHHHHhCCC
Q 026808 170 ARGWGCRSIALHCDFNNLGATKLYKGQGF 198 (233)
Q Consensus 170 a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf 198 (233)
+++ |++.+.+. .|..+.+||+++||
T Consensus 93 ~~~-~~~~l~~~---~~~~a~~~y~~~GF 117 (117)
T PF13673_consen 93 AKD-GIRRLTVE---ANERARRFYRKLGF 117 (117)
T ss_dssp HTT-TCEEEEEE---C-HHHHHHHHHTT-
T ss_pred HHc-CCcEEEEE---eCHHHHHHHHhCCC
Confidence 966 88877776 77999999999998
No 35
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.59 E-value=2.2e-14 Score=116.23 Aligned_cols=136 Identities=15% Similarity=0.201 Sum_probs=94.2
Q ss_pred CCCCceEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecC
Q 026808 19 XXSPEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSED 98 (233)
Q Consensus 19 ~~~~~i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (233)
+..+.++||++++.|++.|.+|..+...-.+... ....+.+...+.. + ..+.+...+
T Consensus 182 ~l~m~~~Ir~a~~~Dl~ri~~L~~~tnqfn~~~~---~~s~~~i~~~l~~-------------------~-~~~~~~~~d 238 (320)
T TIGR01686 182 NLELSLNISKNDEQNVQRVEELLGRTNQFNATYT---RLNQEDVAQHMQK-------------------E-EIVTVSMSD 238 (320)
T ss_pred hCCCEEEEEECChhhhHHHHHHHHhHHhhhccCc---cCCHHHHHHHhcC-------------------C-CEEEEEEEe
Confidence 3456789999999999999999987621121111 0011222222211 1 111111111
Q ss_pred ceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeE
Q 026808 99 FKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSI 178 (233)
Q Consensus 99 ~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i 178 (233)
+ | .++.++|++.+... ...++|..++|+|++||+|+|++||+++++.+++.|+..+
T Consensus 239 -~---~------gd~givG~~~~~~~--------------~~~~~I~~l~vs~r~~grGig~~Ll~~l~~~a~~~G~~~i 294 (320)
T TIGR01686 239 -R---F------GDSGIIGIFVFEKK--------------EGNLFIDDLCMSCRALGRGVETRMLRWLFEQALDLGNHNA 294 (320)
T ss_pred -c---C------CCCceEEEEEEEec--------------CCcEEEEEEEEcHhHhcCcHHHHHHHHHHHHHHHcCCCeE
Confidence 0 0 02678999887532 1238999999999999999999999999999999999999
Q ss_pred EEEee--cCChhhHHHHHhCCCEEE
Q 026808 179 ALHCD--FNNLGATKLYKGQGFKCV 201 (233)
Q Consensus 179 ~l~~~--~~n~~a~~~y~k~Gf~~~ 201 (233)
.+.+. ..|..|+.||+++||+.+
T Consensus 295 ~l~v~~~~~N~~A~~fY~~~GF~~~ 319 (320)
T TIGR01686 295 RLYYRRTERNMPFLSFYEQIGFEDE 319 (320)
T ss_pred EEEEeeCCCchHHHHHHHHcCCccC
Confidence 99875 579999999999999854
No 36
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.59 E-value=7e-14 Score=99.98 Aligned_cols=137 Identities=17% Similarity=0.166 Sum_probs=89.2
Q ss_pred ceEEEeCCcccHHHHHhhhhhccCCCC---CCh-HHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecC
Q 026808 23 EIVVREARIEDIWEVAETHCSCFFPNY---TFP-LDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSED 98 (233)
Q Consensus 23 ~i~iR~~~~~D~~~i~~l~~~~f~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (233)
+++||+++++|++.+.++.+..-...+ ..+ .+.....+.+......... .....+.+...+
T Consensus 1 Rl~lr~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~i~~~~ 65 (142)
T PF13302_consen 1 RLTLRPLTPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWEN---------------HGYYYFAIEDKD 65 (142)
T ss_dssp SEEEEE-HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHE---------------ETEEEEEEEETT
T ss_pred CEEEEcCCHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhc---------------ccceEEEEEecc
Confidence 478999999999999999963222222 111 1222222233211111000 011222333222
Q ss_pred ceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHh-cCCCe
Q 026808 99 FKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARG-WGCRS 177 (233)
Q Consensus 99 ~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~-~g~~~ 177 (233)
++++||++.+..... ..+.+.+ .+.|.|+|||+|+|++++..+++++++ .|+..
T Consensus 66 -------------~~~~iG~i~~~~~~~-----------~~~~~ei-g~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~ 120 (142)
T PF13302_consen 66 -------------DGEIIGFIGLYNIDK-----------NNNWAEI-GYWIGPDYRGKGYGTEALKLLLDWAFEELGLHR 120 (142)
T ss_dssp -------------TTEEEEEEEEEEEET-----------TTTEEEE-EEEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSE
T ss_pred -------------CCceEEEeeeeeccc-----------CCCcccc-ccchhHHHHhhhHHHHHHHHHHHHHHhcCCcEE
Confidence 268999999843211 2344787 699999999999999999999999965 59999
Q ss_pred EEEEeecCChhhHHHHHhCCCE
Q 026808 178 IALHCDFNNLGATKLYKGQGFK 199 (233)
Q Consensus 178 i~l~~~~~n~~a~~~y~k~Gf~ 199 (233)
+.+.+.+.|.+|+++++|+||+
T Consensus 121 i~a~~~~~N~~s~~~~~k~GF~ 142 (142)
T PF13302_consen 121 IIATVMADNEASRRLLEKLGFE 142 (142)
T ss_dssp EEEEEETT-HHHHHHHHHTT-E
T ss_pred EEEEECcCCHHHHHHHHHcCCC
Confidence 9999999999999999999996
No 37
>PLN02825 amino-acid N-acetyltransferase
Probab=99.59 E-value=4.7e-15 Score=125.23 Aligned_cols=124 Identities=15% Similarity=0.190 Sum_probs=92.1
Q ss_pred eEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceecc
Q 026808 24 IVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGG 103 (233)
Q Consensus 24 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (233)
-.||+++++|++.|.+|+.......+..... .+.+.. .-..+++++.+
T Consensus 368 e~IR~At~eDi~~I~~Li~~lee~g~lv~rs----~e~le~-----------------------ei~~f~V~e~D----- 415 (515)
T PLN02825 368 EGTRMARVEDLAGIRQIIRPLEESGILVRRT----DEELLR-----------------------ALDSFVVVERE----- 415 (515)
T ss_pred hhheeCCHHHHHHHHHHHHHHHHcCCCcCCC----HHHHHh-----------------------cCCcEEEEEEC-----
Confidence 3699999999999999998654322221110 111100 01346677777
Q ss_pred cCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEee
Q 026808 104 LDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCD 183 (233)
Q Consensus 104 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~ 183 (233)
++++|++.+.... ..+.++|..++|+|+|||+|+|++||++++++|+++|++.+.+.+
T Consensus 416 ---------g~IVG~aal~~~~------------~~~~aEI~~laV~P~yRGkGiG~~LL~~le~~Ar~~G~~~L~Llt- 473 (515)
T PLN02825 416 ---------GSIIACAALFPFF------------EEKCGEVAAIAVSPECRGQGQGDKLLDYIEKKAASLGLEKLFLLT- 473 (515)
T ss_pred ---------CEEEEEEEEEeec------------CCCcEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEe-
Confidence 8999998865321 113488999999999999999999999999999999999998876
Q ss_pred cCChhhHHHHHhCCCEEEecC
Q 026808 184 FNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 184 ~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
..+.+||+++||+.++..
T Consensus 474 ---t~a~~fY~k~GF~~~~~~ 491 (515)
T PLN02825 474 ---TRTADWFVRRGFSECSIE 491 (515)
T ss_pred ---CcHHHHHHHCCCEEeChh
Confidence 346899999999998764
No 38
>PRK10562 putative acetyltransferase; Provisional
Probab=99.58 E-value=4.3e-14 Score=101.66 Aligned_cols=70 Identities=26% Similarity=0.430 Sum_probs=59.3
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
++++|++.+... ..+..++|+|+|||+|+|++|++++++. +..+.+.+...|..+.+|
T Consensus 57 ~~~iG~~~~~~~-----------------~~i~~~~v~~~~rg~G~g~~ll~~~~~~-----~~~~~~~v~~~N~~s~~~ 114 (145)
T PRK10562 57 GKLLGFVSVLEG-----------------RFVGALFVAPKAVRRGIGKALMQHVQQR-----YPHLSLEVYQKNQRAVNF 114 (145)
T ss_pred CEEEEEEEEeec-----------------cEEEEEEECHHHcCCCHHHHHHHHHHhh-----CCeEEEEEEcCChHHHHH
Confidence 688899876421 3567799999999999999999999874 456888899999999999
Q ss_pred HHhCCCEEEecC
Q 026808 193 YKGQGFKCVKVP 204 (233)
Q Consensus 193 y~k~Gf~~~~~~ 204 (233)
|+|+||+.++..
T Consensus 115 y~k~Gf~~~~~~ 126 (145)
T PRK10562 115 YHAQGFRIVDSA 126 (145)
T ss_pred HHHCCCEEcccc
Confidence 999999998864
No 39
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.57 E-value=1.2e-14 Score=122.14 Aligned_cols=124 Identities=20% Similarity=0.248 Sum_probs=89.4
Q ss_pred eEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceecc
Q 026808 24 IVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGG 103 (233)
Q Consensus 24 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (233)
+.||+++++|++.|.++.+......+..+.. .+.+.. ....+++++.+
T Consensus 283 ~~IR~at~~Dl~~I~~L~~~~~~~~~~~~~~----~~~l~~-----------------------~~~~~~V~~~d----- 330 (429)
T TIGR01890 283 ESIRQATIDDIGGIAALIRPLEEQGILVRRS----REYLER-----------------------EISEFSIIEHD----- 330 (429)
T ss_pred hheEECCHHHHHHHHHHHHHHHHcCCchhhh----HHHHHh-----------------------hcCcEEEEEEC-----
Confidence 5799999999999999987544333322211 111100 11234555566
Q ss_pred cCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEee
Q 026808 104 LDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCD 183 (233)
Q Consensus 104 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~ 183 (233)
++++|++.+.... ....++|..++|+|+|||+|+|++||++++++|+++|+..+++.
T Consensus 331 ---------g~iVG~~~~~~~~------------~~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~A~~~G~~~l~v~-- 387 (429)
T TIGR01890 331 ---------GNIIGCAALYPYA------------EEDCGEMACLAVSPEYQDGGRGERLLAHIEDRARQMGISRLFVL-- 387 (429)
T ss_pred ---------CEEEEEEEEEecC------------CCCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEe--
Confidence 7999999875421 11337898999999999999999999999999999999987654
Q ss_pred cCChhhHHHHHhCCCEEEecC
Q 026808 184 FNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 184 ~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
..| +.+||+++||+.+++.
T Consensus 388 ~~~--a~~fY~k~GF~~~g~~ 406 (429)
T TIGR01890 388 TTR--TGHWFRERGFQTASVD 406 (429)
T ss_pred ecc--hHHHHHHCCCEECChh
Confidence 333 5799999999999874
No 40
>PHA01807 hypothetical protein
Probab=99.56 E-value=8.2e-14 Score=100.22 Aligned_cols=75 Identities=19% Similarity=0.094 Sum_probs=61.5
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
++++|++.+...... .......+..++|+|+|||+|||++||+.++++|++.|+..+.+.+..+|.+|++|
T Consensus 62 g~lvG~~~l~~~~~~---------~~~~i~~l~~lYV~pe~RG~GiG~~Ll~~~~~~Ar~~G~~~l~l~v~~~n~~a~~~ 132 (153)
T PHA01807 62 GKLAGIAVLVFEDDP---------HVGPCLGVQWQYVLPEYRNAGVAREFLRELIRLAGEGNLPLIAFSHREGEGRYTIH 132 (153)
T ss_pred CEEEEEEEEEcCCCc---------ceeeeccceeEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEecCCcHHHHHH
Confidence 789999887542211 11122445568999999999999999999999999999999999999999999999
Q ss_pred HHhC
Q 026808 193 YKGQ 196 (233)
Q Consensus 193 y~k~ 196 (233)
|++.
T Consensus 133 y~~~ 136 (153)
T PHA01807 133 YRRV 136 (153)
T ss_pred HHhc
Confidence 9964
No 41
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.56 E-value=4.3e-14 Score=123.63 Aligned_cols=125 Identities=18% Similarity=0.250 Sum_probs=90.6
Q ss_pred CceEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCcee
Q 026808 22 PEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKV 101 (233)
Q Consensus 22 ~~i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (233)
..+.||+++++|++.|.++....+......+... .. .. .....+++++.+
T Consensus 462 ~gm~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~----~~---l~--------------------~~~~~~~Va~~~--- 511 (614)
T PRK12308 462 SGVKVRPARLTDIDAIEGMVAYWAGLGENLPRSR----NE---LV--------------------RDIGSFAVAEHH--- 511 (614)
T ss_pred CCCEEEECCHHHHHHHHHHHHHHHhhhcccccCH----HH---Hh--------------------cccCcEEEEEEC---
Confidence 3478999999999999999875443222222110 00 00 011345666666
Q ss_pred cccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEE
Q 026808 102 GGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALH 181 (233)
Q Consensus 102 ~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~ 181 (233)
++++|++.+.... ...++|..++|+|+|||+|||++|++.+++++++.|+..+.+.
T Consensus 512 -----------g~IVG~~~l~~~~-------------~~~~~I~~i~V~P~~rGkGIGk~Ll~~l~~~ak~~g~~~i~l~ 567 (614)
T PRK12308 512 -----------GEVTGCASLYIYD-------------SGLAEIRSLGVEAGWQVQGQGSALVQYLVEKARQMAIKKVFVL 567 (614)
T ss_pred -----------CEEEEEEEEEEcC-------------CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 7899998865321 1237899999999999999999999999999999999998875
Q ss_pred eecCChhhHHHHHhCCCEEEecCC
Q 026808 182 CDFNNLGATKLYKGQGFKCVKVPE 205 (233)
Q Consensus 182 ~~~~n~~a~~~y~k~Gf~~~~~~~ 205 (233)
+. +..||+|+||+.+++..
T Consensus 568 ~~-----a~~FYek~GF~~~~~~~ 586 (614)
T PRK12308 568 TR-----VPEFFMKQGFSPTSKSL 586 (614)
T ss_pred eC-----cHHHHHHCCCEECCccc
Confidence 42 46899999999988653
No 42
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.55 E-value=2.9e-13 Score=108.61 Aligned_cols=139 Identities=17% Similarity=0.136 Sum_probs=94.3
Q ss_pred CCceEEEeCCc-ccHHHHHhhhhhccCCCCC-ChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeec-
Q 026808 21 SPEIVVREARI-EDIWEVAETHCSCFFPNYT-FPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSE- 97 (233)
Q Consensus 21 ~~~i~iR~~~~-~D~~~i~~l~~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 97 (233)
...+.+|+++. .|.+.+.++.+..|..... ...+ .+.+...... .+ . .+ ..++++.+
T Consensus 147 ~~g~~~r~~~~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~----~~---------~--~~-~~~~~a~~~ 206 (292)
T TIGR03448 147 PDGVTVRAYVGAPDDAEWLRVNNAAFAWHPEQGGWT----RADLAERRAE----PW---------F--DP-AGLFLAFDD 206 (292)
T ss_pred CCCeEeeccCCCcchHHHHHHHHHHhhCCCccCCcC----HHHHHHHhhC----cC---------C--Cc-CceEEEEEC
Confidence 45699999864 5888898888887753211 0110 1111111100 00 0 11 22344444
Q ss_pred -CceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCC
Q 026808 98 -DFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCR 176 (233)
Q Consensus 98 -~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~ 176 (233)
+ ++++|++.+..... .....+|..++|+|+|||+|||++|+..+++++++.|+.
T Consensus 207 ~~--------------~~~vG~~~~~~~~~-----------~~~~~~i~~~~V~p~~rg~GiG~~ll~~~~~~~~~~g~~ 261 (292)
T TIGR03448 207 AP--------------GELLGFHWTKVHPD-----------EPALGEVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLP 261 (292)
T ss_pred CC--------------CcEEEEEEEEecCC-----------CCceeEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCC
Confidence 3 68888865432110 012256767899999999999999999999999999999
Q ss_pred eEEEEeecCChhhHHHHHhCCCEEEecC
Q 026808 177 SIALHCDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 177 ~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
.+.+.+...|..+++||+|+||+...+.
T Consensus 262 ~v~l~v~~~N~~a~~~y~k~GF~~~~~~ 289 (292)
T TIGR03448 262 AVMLYVEADNEAAVRTYEKLGFTVAEVD 289 (292)
T ss_pred EEEEEEeCCCHHHHHHHHHcCCEEcccc
Confidence 9999999999999999999999987754
No 43
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.54 E-value=1.6e-13 Score=88.13 Aligned_cols=68 Identities=31% Similarity=0.503 Sum_probs=56.1
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
++++|++.+.... +..+|..++|+|+|||+|||++|++.+.+.+.. ..+++.+ |+.+.+|
T Consensus 12 ~~ivG~~~~~~~~--------------~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~---~~i~l~~---~~~~~~f 71 (79)
T PF13508_consen 12 GEIVGFIRLWPNE--------------DFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS---KKIFLFT---NPAAIKF 71 (79)
T ss_dssp TEEEEEEEEEETT--------------TEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC---SEEEEEE---EHHHHHH
T ss_pred CEEEEEEEEEEcC--------------CEEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC---CcEEEEE---cHHHHHH
Confidence 8999999985432 248999999999999999999999999988843 4566666 4789999
Q ss_pred HHhCCCEE
Q 026808 193 YKGQGFKC 200 (233)
Q Consensus 193 y~k~Gf~~ 200 (233)
|+++||++
T Consensus 72 Y~~~GF~~ 79 (79)
T PF13508_consen 72 YEKLGFEE 79 (79)
T ss_dssp HHHTTEEE
T ss_pred HHHCcCCC
Confidence 99999985
No 44
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=99.53 E-value=5e-14 Score=98.03 Aligned_cols=154 Identities=16% Similarity=0.215 Sum_probs=110.6
Q ss_pred eEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceecc
Q 026808 24 IVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGG 103 (233)
Q Consensus 24 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (233)
.+||+.++.|+-....+..+...+.++.+.- +..+. ..+..+.+++..
T Consensus 2 tt~r~f~~~Dlf~fNninLDpltEt~~~~Fy-------l~yl~--------------------~~pe~~~~a~~p----- 49 (173)
T KOG3234|consen 2 TTIRPFTPQDLFKFNNINLDPLTETFPISFY-------LIYLA--------------------IWPEDFIVAEAP----- 49 (173)
T ss_pred CccccccHHHHHhhccccccccccccceehh-------HHHHH--------------------hChHHhEeccCC-----
Confidence 4689999999988877776665544443321 01110 111233333322
Q ss_pred cCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEee
Q 026808 104 LDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCD 183 (233)
Q Consensus 104 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~ 183 (233)
.+++.|++...... ....| .+++..+.|.|+||+.|+|+.||..+++.....+.-.+.|.|.
T Consensus 50 --------~~~imgyimgk~Eg----~~~~w------h~HvTAltVap~~Rrl~la~~lm~~led~~d~~~a~fvDLfVr 111 (173)
T KOG3234|consen 50 --------TGEIMGYIMGKVEG----KDTEW------HGHVTALTVAPDYRRLGLAAKLMDTLEDVSDVDNAYFVDLFVR 111 (173)
T ss_pred --------CCceEEEEeeeccc----cCcce------eeEEEEEEechhHHHHHHHHHHHHHHHHHHHhhhhheeeeeee
Confidence 27888888763211 11222 3889999999999999999999999999998887778999999
Q ss_pred cCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcchhHHHHHhhhcCCC
Q 026808 184 FNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLKAPT 231 (233)
Q Consensus 184 ~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~~~~~~m~k~l~~~~ 231 (233)
..|.-|+.+|+|+||.+.++...+++. + ++...+-|.|.|+.+.
T Consensus 112 ~sN~iAI~mYkkLGY~~YR~Vi~YY~~-g---~deda~dMRKalSrD~ 155 (173)
T KOG3234|consen 112 VSNQIAIDMYKKLGYSVYRTVIEYYSV-G---PDEDAYDMRKALSRDV 155 (173)
T ss_pred ccchhHHHHHHhcCceEEEeeeeeecc-C---CCcchHhhhhhhccCc
Confidence 999999999999999999988877654 3 3445799999996654
No 45
>PRK01346 hypothetical protein; Provisional
Probab=99.52 E-value=4.6e-13 Score=112.42 Aligned_cols=134 Identities=18% Similarity=0.111 Sum_probs=93.6
Q ss_pred CCceEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCce
Q 026808 21 SPEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFK 100 (233)
Q Consensus 21 ~~~i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (233)
.+.+.||+++++|++++.+|...+|..... + .. +......+ .....+++.++
T Consensus 4 ~~~~~iR~~~~~D~~~i~~L~~~~f~~~~~-~----~~---~~~~~~~~------------------~~~~~~va~~~-- 55 (411)
T PRK01346 4 DMAITIRTATEEDWPAWFRAAATGFGDSPS-D----EE---LEAWRALV------------------EPDRTLGAFDG-- 55 (411)
T ss_pred CCCceeecCCHHHHHHHHHHHHHHcCCCCC-h----HH---HHHHHHhc------------------CcCCeEEEEEC--
Confidence 356889999999999999999999865431 1 11 11111110 11234555556
Q ss_pred ecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEE
Q 026808 101 VGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIAL 180 (233)
Q Consensus 101 ~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l 180 (233)
++++|++.+.......+ ........+|..++|+|+|||+|||++||+++++.++++|+..+.|
T Consensus 56 ------------~~lvg~~~~~~~~~~~~-----~~~~~~~~~i~~v~V~P~~RgrGig~~Ll~~~l~~a~~~g~~~~~L 118 (411)
T PRK01346 56 ------------DEVVGTAGAFDLRLTVP-----GGAVLPAAGVTAVTVAPTHRRRGLLTALMREQLRRIRERGEPVAAL 118 (411)
T ss_pred ------------CEEEEEEEEeccccccC-----CCCccceeEEEEEEEChhhcCCCHHHHHHHHHHHHHHHCCCcEEEE
Confidence 78999888653211110 0111245899999999999999999999999999999999988877
Q ss_pred EeecCChhhHHHHHhCCCEEEecC
Q 026808 181 HCDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 181 ~~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
.+.. .+||+++||......
T Consensus 119 ~~~~-----~~~Y~r~Gf~~~~~~ 137 (411)
T PRK01346 119 TASE-----GGIYGRFGYGPATYS 137 (411)
T ss_pred ECCc-----hhhHhhCCCeeccce
Confidence 6543 479999999988653
No 46
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.52 E-value=1.1e-13 Score=116.94 Aligned_cols=124 Identities=20% Similarity=0.285 Sum_probs=88.6
Q ss_pred eEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceecc
Q 026808 24 IVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGG 103 (233)
Q Consensus 24 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (233)
+.||+++.+|++.|.+++.......+..+.. .+.+ . .....+++++++
T Consensus 295 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~----~~~l----~-------------------~~~~~~~va~~d----- 342 (441)
T PRK05279 295 EQLRRATIDDVGGILELIRPLEEQGILVRRS----REQL----E-------------------REIDKFTVIERD----- 342 (441)
T ss_pred HHeEeCCHHHHHHHHHHHHHHHHcCCccccC----HHHH----h-------------------cccCcEEEEEEC-----
Confidence 6899999999999999986322112211100 0000 0 011235566666
Q ss_pred cCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEee
Q 026808 104 LDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCD 183 (233)
Q Consensus 104 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~ 183 (233)
++++|++.+..... ...++|..++|+|+|||+|+|++|+++++++|++.|+..+.+.+
T Consensus 343 ---------g~iVG~~~~~~~~~------------~~~~~I~~l~V~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~l~l~~- 400 (441)
T PRK05279 343 ---------GLIIGCAALYPFPE------------EKMGEMACLAVHPDYRGSGRGERLLKRIEQRARQLGLKRLFVLT- 400 (441)
T ss_pred ---------CEEEEEEEEEEcCC------------CCeEEEEEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEec-
Confidence 78999987654211 13378999999999999999999999999999999999886643
Q ss_pred cCChhhHHHHHhCCCEEEecC
Q 026808 184 FNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 184 ~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
..+.+||+++||+.+++.
T Consensus 401 ---~~a~~fY~k~GF~~~g~~ 418 (441)
T PRK05279 401 ---TRTAHWFLERGFVPVDVD 418 (441)
T ss_pred ---chHHHHHHHCcCEECChh
Confidence 467999999999999864
No 47
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=99.50 E-value=1.8e-13 Score=100.12 Aligned_cols=84 Identities=26% Similarity=0.400 Sum_probs=73.0
Q ss_pred eeEEEEEEEccCcccccHHHHHHHHHHHHHHhcC-CCeEEEEeecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcchh
Q 026808 141 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGWG-CRSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVK 219 (233)
Q Consensus 141 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g-~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~~~ 219 (233)
..||..++|.|.||.+|||+.|++.+.+.+.+.. ++.+++++...|..++.||+++||+.+.+..+++...+...+
T Consensus 89 ~~yi~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~~~~~y~~~~~~~~--- 165 (187)
T KOG3138|consen 89 VIYILSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIVERLKNYYSILGPPDD--- 165 (187)
T ss_pred eeEEEeecccHHHHhcchHHHHHHHHHHHHhcccccceEEEEEEeCCCcHHHHHHhcCceEeeccccccccccCcch---
Confidence 4899999999999999999999999999999986 889999999999999999999999999999888665444333
Q ss_pred HHHHHhhhc
Q 026808 220 FKFMMKLLK 228 (233)
Q Consensus 220 ~~~m~k~l~ 228 (233)
.+|.+.+.
T Consensus 166 -~~l~~~~~ 173 (187)
T KOG3138|consen 166 -SFLRKLLI 173 (187)
T ss_pred -hhhhhhee
Confidence 55666553
No 48
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.50 E-value=7.1e-13 Score=95.93 Aligned_cols=134 Identities=19% Similarity=0.231 Sum_probs=97.9
Q ss_pred CceEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCcee
Q 026808 22 PEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKV 101 (233)
Q Consensus 22 ~~i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (233)
+++.||..++.|.+.|.++..++|... . . ..+...+.+- ........+|+.++
T Consensus 2 ~~~~ir~e~~~d~~~i~~~~~~aF~~~-~-e-------~~~v~~lR~~---------------~~~~~~LslVA~d~--- 54 (171)
T COG3153 2 MMMLIRTETPADIPAIEALTREAFGPG-R-E-------AKLVDKLREG---------------GRPDLTLSLVAEDD--- 54 (171)
T ss_pred CccEEEecChhhHHHHHHHHHHHhhcc-h-H-------HHHHHHHHhc---------------CCcccceeEEEeeC---
Confidence 458899999999999999999999611 0 1 1111111110 01133566788777
Q ss_pred cccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEE
Q 026808 102 GGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALH 181 (233)
Q Consensus 102 ~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~ 181 (233)
|++||.+.++...-. .......-+.-+.|+|+|||+|||++|++..++.++..|+..+.+.
T Consensus 55 -----------g~vvG~Il~s~v~~~--------g~~~~~~~LaPLaV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vl 115 (171)
T COG3153 55 -----------GEVVGHILFSPVTVG--------GEELGWLGLAPLAVDPEYQGQGIGSALVREGLEALRLAGASAVVVL 115 (171)
T ss_pred -----------CEEEEEEEEeEEEec--------CcccceEEEEeEEEchhhcCCcHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 899999988764322 1222347788999999999999999999999999999999988773
Q ss_pred eecCChhhHHHHHhCCCEEEecCCCC
Q 026808 182 CDFNNLGATKLYKGQGFKCVKVPEGA 207 (233)
Q Consensus 182 ~~~~n~~a~~~y~k~Gf~~~~~~~~~ 207 (233)
+...+|.++||+........
T Consensus 116 ------Gdp~YY~rfGF~~~~~~~l~ 135 (171)
T COG3153 116 ------GDPTYYSRFGFEPAAGAKLY 135 (171)
T ss_pred ------cCcccccccCcEEccccccc
Confidence 33679999999998866443
No 49
>PRK13688 hypothetical protein; Provisional
Probab=99.43 E-value=1.7e-12 Score=93.95 Aligned_cols=81 Identities=14% Similarity=0.187 Sum_probs=54.9
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
++++|++.+........ .......+.++|..++|+|+|||+|||++|++.+. +.++. + .+...| .+.+|
T Consensus 54 ~~~VG~~~l~~~dg~~~---~~~~~~~~~~~L~~l~V~p~~rgkGiG~~Ll~~a~----~~~~~-~--~~~~~~-~a~~F 122 (156)
T PRK13688 54 DSLVARMSLYKKGGVEE---PYFEDTQDYLELWKLEVLPKYQNRGYGEMLVDFAK----SFQLP-I--KTIARN-KSKDF 122 (156)
T ss_pred CEEEEEEEEEecCCccc---ccccCCCCeEEEEEEEECHHHcCCCHHHHHHHHHH----HhCCe-E--EEEecc-chHHH
Confidence 68888776532111100 01113345689999999999999999999998644 33443 2 344445 57899
Q ss_pred HHhCCCEEEecC
Q 026808 193 YKGQGFKCVKVP 204 (233)
Q Consensus 193 y~k~Gf~~~~~~ 204 (233)
|+|+||+.+++.
T Consensus 123 Y~k~GF~~~~~~ 134 (156)
T PRK13688 123 WLKLGFTPVEYK 134 (156)
T ss_pred HHhCCCEEeEEe
Confidence 999999999876
No 50
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.42 E-value=1.4e-12 Score=104.68 Aligned_cols=74 Identities=16% Similarity=0.178 Sum_probs=60.6
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
++++|++.+..... ...++..++|+|+|||+|||++|++++++.+. ..+.+.+...|..|++|
T Consensus 55 ~~~vG~~~~~~~~~-------------~~~~~~~l~V~p~~rg~GiG~~Ll~~~~~~~~----~~~~~~~~~~n~~a~~f 117 (292)
T TIGR03448 55 DPIVGYANLVPARG-------------TDPAMAELVVHPAHRRRGIGRALIRALLAKGG----GRLRVWAHGDLPAARAL 117 (292)
T ss_pred CEEEEEEEEEcCCC-------------CcceEEEEEECHhhcCCCHHHHHHHHHHHhcc----CceEEEEcCCCHHHHHH
Confidence 78999988754211 11467889999999999999999999999764 45778888899999999
Q ss_pred HHhCCCEEEec
Q 026808 193 YKGQGFKCVKV 203 (233)
Q Consensus 193 y~k~Gf~~~~~ 203 (233)
|+++||+.+..
T Consensus 118 y~~~Gf~~~~~ 128 (292)
T TIGR03448 118 ASRLGLVPTRE 128 (292)
T ss_pred HHHCCCEEccE
Confidence 99999987753
No 51
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=99.39 E-value=4.6e-12 Score=82.41 Aligned_cols=61 Identities=25% Similarity=0.344 Sum_probs=53.1
Q ss_pred eEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEec
Q 026808 142 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKV 203 (233)
Q Consensus 142 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~ 203 (233)
+.|..+.|+|+|||+|+|+.++..+.+.+.+.|.. ..+.+..+|.+|+++|+|+||+....
T Consensus 22 g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~~g~~-~~l~v~~~N~~s~~ly~klGf~~~~~ 82 (86)
T PF08445_consen 22 GEIGGVYTLPEHRRRGLGSALVAALARELLERGKT-PFLYVDADNEASIRLYEKLGFREIEE 82 (86)
T ss_dssp CCEEEEEE-GGGTTSSHHHHHHHHHHHHHHHTTSE-EEEEEETT-HHHHHHHHHCT-EEEEE
T ss_pred cEEEEEEECHHHcCCCHHHHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHcCCEEEEE
Confidence 68889999999999999999999999999998764 67889999999999999999998864
No 52
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.39 E-value=2.9e-12 Score=101.79 Aligned_cols=71 Identities=23% Similarity=0.341 Sum_probs=62.3
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
++++|++.+.. .+|..++|+|+|||+|+|++|++.+++.+++.|+..+.+.+...| ..|
T Consensus 15 ~~iVG~~~l~~------------------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~~g~~~i~L~t~~~~---~~f 73 (297)
T cd02169 15 GELIATGSIAG------------------NVLKCVAVCPKYQGEGLALKIVSELINKAYEEGIFHLFLFTKPKN---AKF 73 (297)
T ss_pred CEEEEEEEecc------------------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEEcccH---HHH
Confidence 78999887632 357899999999999999999999999999999999999887544 799
Q ss_pred HHhCCCEEEecC
Q 026808 193 YKGQGFKCVKVP 204 (233)
Q Consensus 193 y~k~Gf~~~~~~ 204 (233)
|+|+||+.++..
T Consensus 74 Yek~GF~~~~~~ 85 (297)
T cd02169 74 FRGLGFKELANA 85 (297)
T ss_pred HHHCCCEEeccc
Confidence 999999999843
No 53
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=99.32 E-value=3.2e-11 Score=91.76 Aligned_cols=78 Identities=23% Similarity=0.285 Sum_probs=66.3
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
|++|..+.... .+.....|.+++|+|+|||+|+|+.|+..+.+.....|. ..+|.+...|+.|.+.
T Consensus 186 ~~iVa~A~t~a-------------~~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk-~~~L~~~~~N~~A~~i 251 (268)
T COG3393 186 GKIVAKAETAA-------------ENPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGK-IPCLFVNSDNPVARRI 251 (268)
T ss_pred CcEEEeeeccc-------------cCCcceEEEEEEcCHHHccccHHHHHHHHHHHHHHhCCC-eeEEEEecCCHHHHHH
Confidence 58888887643 223448999999999999999999999999999888876 4678888999999999
Q ss_pred HHhCCCEEEecC
Q 026808 193 YKGQGFKCVKVP 204 (233)
Q Consensus 193 y~k~Gf~~~~~~ 204 (233)
|++.||+..++.
T Consensus 252 Y~riGF~~~g~~ 263 (268)
T COG3393 252 YQRIGFREIGEF 263 (268)
T ss_pred HHHhCCeecceE
Confidence 999999998853
No 54
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=99.31 E-value=1.2e-11 Score=89.15 Aligned_cols=95 Identities=21% Similarity=0.243 Sum_probs=78.7
Q ss_pred ccceeeeecCceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHH
Q 026808 89 DETFFLGSEDFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEA 168 (233)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~ 168 (233)
...++++.+++ ++++|+..+..-.+. +...+|+..+-|.+.|||+|||+.||+.+..
T Consensus 91 ~~~Yi~a~~~~-------------~~~vgf~~Frf~vd~----------g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~ 147 (202)
T KOG2488|consen 91 KLRYICAWNNK-------------SKLVGFTMFRFTVDT----------GDPVLYCYEVQVASAYRGKGIGKFLLDTLEK 147 (202)
T ss_pred cceEEEEEcCC-------------CceeeEEEEEEEccc----------CCeEEEEEEEeehhhhhccChHHHHHHHHHH
Confidence 35677777761 488999988653221 2345899999999999999999999999999
Q ss_pred HHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCC
Q 026808 169 QARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 169 ~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~ 206 (233)
.+.....+.|.|+|...|.+|+.||.++||......+.
T Consensus 148 ~a~~~~~~kVmLTVf~~N~~al~Fy~~~gf~~~~~sp~ 185 (202)
T KOG2488|consen 148 LADSRHMRKVMLTVFSENIRALGFYHRLGFVVDEESPC 185 (202)
T ss_pred HHHHHHhhhheeeeecccchhHHHHHHcCcccCCCCCc
Confidence 99999999999999999999999999999998776543
No 55
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=99.30 E-value=4.1e-11 Score=89.29 Aligned_cols=95 Identities=16% Similarity=0.198 Sum_probs=76.3
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhc-CCCeEEEEeecCChhhHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRSIALHCDFNNLGATK 191 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~-g~~~i~l~~~~~n~~a~~ 191 (233)
++++|.+.+..... .......+| .+.+.|+|||+|+|++.+..+++++++. ++.++.+.|.+.|.+|++
T Consensus 77 ~~~iG~~~~~~~~~---------~~~~~~~~i-g~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~r 146 (187)
T COG1670 77 GELIGVIGLSDIDR---------AANGDLAEI-GYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIR 146 (187)
T ss_pred CeEEEEEEEEEecc---------ccccceEEE-EEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHH
Confidence 58999999865432 011233666 7788999999999999999999999995 999999999999999999
Q ss_pred HHHhCCCEEEecCCCCCCCCCCCCcc
Q 026808 192 LYKGQGFKCVKVPEGANWPQPKNSPD 217 (233)
Q Consensus 192 ~y~k~Gf~~~~~~~~~~~~~~~~~~~ 217 (233)
+++|+||+..+......+..+.+.+.
T Consensus 147 v~ek~Gf~~eg~~~~~~~~~g~~~d~ 172 (187)
T COG1670 147 VYEKLGFRLEGELRQHEFIKGRWRDT 172 (187)
T ss_pred HHHHcCChhhhhhhhceeeCCeeeeE
Confidence 99999999999776654444444443
No 56
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=99.30 E-value=5.5e-11 Score=80.27 Aligned_cols=159 Identities=21% Similarity=0.263 Sum_probs=105.1
Q ss_pred CCCCceEEEeCCcccHHHHHhhhhhccCC-CCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeec
Q 026808 19 XXSPEIVVREARIEDIWEVAETHCSCFFP-NYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSE 97 (233)
Q Consensus 19 ~~~~~i~iR~~~~~D~~~i~~l~~~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (233)
..++++.||...+.|.+.+..|.++.-.. .|..+ +++..+..+ . +++..
T Consensus 3 ~vsmp~~~~D~~apd~aavLaLNNeha~elswLe~-------erL~~l~~e----------A-------------F~ArR 52 (167)
T COG3818 3 GVSMPILIRDVRAPDLAAVLALNNEHALELSWLEL-------ERLYRLYKE----------A-------------FVARR 52 (167)
T ss_pred ccccceehhhhcCCchhhHHhccchhhhhccccCH-------HHHHHHHHH----------H-------------HHHhh
Confidence 34667889999999999999999865432 33222 223222221 1 13333
Q ss_pred CceecccCCcccccCCeEEEEEE-eecccCCCCCCCCCC-cCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCC
Q 026808 98 DFKVGGLDGKFSLHRGYVAGILT-VDTVADFLPRKGPLR-QRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGC 175 (233)
Q Consensus 98 ~~~~~~~~~~~~~~~~~ivG~~~-~~~~~~~~~~~~~~~-~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~ 175 (233)
+ |.+.|++. +.....+......|+ +..++..||+.+.|...-||+|+|++|...+.+.|...|+
T Consensus 53 ~--------------G~l~afl~tFd~~a~ydSpNFlWFrErYe~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy 118 (167)
T COG3818 53 D--------------GNLAAFLVTFDSSARYDSPNFLWFRERYENFFYVDRVVVASRARGRGVARALYADLFSYAELAGY 118 (167)
T ss_pred c--------------cchhhheeeccccccCCCCceeehhhhCCceEEEEEEEEEecccccchHHHHHHHHHHHHHhcCC
Confidence 3 23333322 111111211222333 4668899999999999999999999999999999999999
Q ss_pred CeEEEEe--ecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcchhHHHHHhhhc
Q 026808 176 RSIALHC--DFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLK 228 (233)
Q Consensus 176 ~~i~l~~--~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~~~~~~m~k~l~ 228 (233)
..+...| ++.|+++..|...+||..+|... .+++ +.+..+++|++.
T Consensus 119 ~~~tCEVn~DppnpasdaFHaalGF~eVG~a~---ihgg----kk~v~yl~kk~~ 166 (167)
T COG3818 119 PYLTCEVNLDPPNPASDAFHAALGFHEVGQAT---IHGG----KKRVSYLMKKMC 166 (167)
T ss_pred ceEEEEecCCCCChHHHHHhhhcCceEccceE---Eecc----hhhHHHHHHHhh
Confidence 9877664 66899999999999999998642 2223 234567777664
No 57
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=99.26 E-value=1.6e-10 Score=82.35 Aligned_cols=84 Identities=25% Similarity=0.343 Sum_probs=69.9
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
++++|++.++..-... .... .++| +..|+|+-||+|+|+++|+..++.|++.|++.+.++|+.+|.++.+.
T Consensus 78 ~~ivG~i~lRh~Ln~~-----ll~~---gGHI-GY~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~ASrkv 148 (174)
T COG3981 78 GQIVGFINLRHQLNDF-----LLEE---GGHI-GYSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNIASRKV 148 (174)
T ss_pred CcEEEEEEeeeecchH-----HHhc---CCcc-cceeChhhhccCHHHHHHHHHHHHHHHcCCCeEEEEeCCCCchhhHH
Confidence 8999999986521111 1111 2677 78999999999999999999999999999999999999999999999
Q ss_pred HHhCCCEEEecCC
Q 026808 193 YKGQGFKCVKVPE 205 (233)
Q Consensus 193 y~k~Gf~~~~~~~ 205 (233)
-+++|=....+..
T Consensus 149 I~~NGGile~~~~ 161 (174)
T COG3981 149 IEANGGILENEFF 161 (174)
T ss_pred HHhcCCEEeEEEc
Confidence 9999988777543
No 58
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=99.20 E-value=1.6e-10 Score=93.44 Aligned_cols=82 Identities=24% Similarity=0.302 Sum_probs=69.8
Q ss_pred cceeeeecCceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHH
Q 026808 90 ETFFLGSEDFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQ 169 (233)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~ 169 (233)
..++++.++ ++++|++.+.. ..|..++|+|+|||+|+|++|+..+++.
T Consensus 31 d~~vv~~~~--------------~~lVg~g~l~g------------------~~ik~vaV~~~~rG~Glg~~L~~~L~~~ 78 (332)
T TIGR00124 31 EIFIAVYED--------------EEIIGCGGIAG------------------NVIKCVAIDESLRGEGLALQLMTELENL 78 (332)
T ss_pred CEEEEEEEC--------------CEEEEEEEEec------------------CEEEEEEEcHHHcCCCHHHHHHHHHHHH
Confidence 456666666 79999988732 2577999999999999999999999999
Q ss_pred HHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCC
Q 026808 170 ARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 170 a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~ 206 (233)
+++.|+..+.+.+.+.| ..||+++||......+.
T Consensus 79 a~~~G~~~l~l~Tk~~~---~~fy~klGF~~i~~~~~ 112 (332)
T TIGR00124 79 AYELGRFHLFIFTKPEY---AALFEYCGFKTLAEAKD 112 (332)
T ss_pred HHHcCCCEEEEEECchH---HHHHHHcCCEEeeeecc
Confidence 99999999999887555 68999999999997764
No 59
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=99.16 E-value=5.8e-10 Score=77.05 Aligned_cols=94 Identities=17% Similarity=0.123 Sum_probs=72.9
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhc-CCCeEEEEeecCChhhHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRSIALHCDFNNLGATK 191 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~-g~~~i~l~~~~~n~~a~~ 191 (233)
|++++++.+.+.... .. ...|.++.|.|++||+|+|.+||...++.+.+. .-+.++|.+. .-...
T Consensus 59 g~LvAyaRLl~~~~~----------~~-~~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQ---ahLq~ 124 (155)
T COG2153 59 GELVAYARLLPPGAE----------YE-EVSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQ---AHLQD 124 (155)
T ss_pred CeEEEEEecCCCCCC----------cC-ceeeeeEEECHhhhccchhHHHHHHHHHHHHhhCCCCCeEEehH---HHHHH
Confidence 899999987442111 11 167999999999999999999999999999887 4556888776 56699
Q ss_pred HHHhCCCEEEecCCCCCCCCCCCCcchhHHHHHhhhc
Q 026808 192 LYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLK 228 (233)
Q Consensus 192 ~y~k~Gf~~~~~~~~~~~~~~~~~~~~~~~~m~k~l~ 228 (233)
||.++||..++. ....|++..+-|.+...
T Consensus 125 fYa~~GFv~~~e--------~yledGIpHv~M~r~~~ 153 (155)
T COG2153 125 FYASFGFVRVGE--------EYLEDGIPHVGMIREVI 153 (155)
T ss_pred HHHHhCcEEcCc--------hhhcCCCCchhhhhccc
Confidence 999999998884 34556666777776653
No 60
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=99.04 E-value=2e-09 Score=76.48 Aligned_cols=81 Identities=20% Similarity=0.270 Sum_probs=67.3
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
.+++|........ ...+.+.+..+.|+++.||+|.|+.||+.++.+++..|++.++|.+... .+|
T Consensus 66 ~~VigH~rLS~i~-----------n~~~al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~~gf~~~yLsT~DQ----~~F 130 (225)
T KOG3397|consen 66 DEVLGHSRLSHLP-----------NRDHALWVESVVVKKDQRGLGFGKFLMKSTEKWMREKGFNEAYLSTDDQ----CRF 130 (225)
T ss_pred cceeeeeccccCC-----------CCCceeEEEEEEEehhhccccHHHHHHHHHHHHHHHhhhhheeeecccc----hhh
Confidence 6888888876532 2234589999999999999999999999999999999999999988643 689
Q ss_pred HHhCCCEEEecCCCCC
Q 026808 193 YKGQGFKCVKVPEGAN 208 (233)
Q Consensus 193 y~k~Gf~~~~~~~~~~ 208 (233)
|+++||+...-+..+.
T Consensus 131 Ye~lGYe~c~Pi~~~~ 146 (225)
T KOG3397|consen 131 YESLGYEKCDPIVHST 146 (225)
T ss_pred hhhhcccccCceeccc
Confidence 9999999877554443
No 61
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=99.03 E-value=9.9e-10 Score=93.62 Aligned_cols=93 Identities=16% Similarity=0.252 Sum_probs=67.0
Q ss_pred ccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEE-----------EccCcccccHHHHHHHHHHHHHH
Q 026808 103 GLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVA-----------VREKFRRKGIAKRLIAKAEAQAR 171 (233)
Q Consensus 103 ~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~-----------V~p~~rg~Gig~~Ll~~~~~~a~ 171 (233)
.|.++...+++.++|++.+......... ......+.|..+. ++|+|||+|+|++||+.+++.|+
T Consensus 413 ~F~~y~~~~~~~l~G~lrlr~~~~~~~~-----~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar 487 (522)
T TIGR01211 413 FFLSYEDPKNDILIGFLRLRFPSEPAHR-----KEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAA 487 (522)
T ss_pred EEEEEEcCCCCeEEEEEEEecCcccccc-----cccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHH
Confidence 3445555556899999998753221100 0111134444444 35999999999999999999999
Q ss_pred hcCCCeEEEEeecCChhhHHHHHhCCCEEEec
Q 026808 172 GWGCRSIALHCDFNNLGATKLYKGQGFKCVKV 203 (233)
Q Consensus 172 ~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~ 203 (233)
+.|++.+.+.+ |..+.+||+|+||+..+.
T Consensus 488 ~~G~~~i~v~s---~~~A~~FY~klGf~~~g~ 516 (522)
T TIGR01211 488 EEGSEKILVIS---GIGVREYYRKLGYELDGP 516 (522)
T ss_pred HCCCCEEEEee---CchHHHHHHHCCCEEEcc
Confidence 99999998744 689999999999998773
No 62
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=98.99 E-value=5.2e-10 Score=77.83 Aligned_cols=172 Identities=15% Similarity=0.082 Sum_probs=100.5
Q ss_pred CCceEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCce
Q 026808 21 SPEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFK 100 (233)
Q Consensus 21 ~~~i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (233)
...+.|||..++|+.++..|-...|++..... +.....+|.+....+-..|... ..+.. ...
T Consensus 9 p~~~~irp~i~e~~q~~~~Lea~~FPe~eras---------feii~~r~i~~pevc~glf~~~------~h~~~-~~~-- 70 (190)
T KOG4144|consen 9 PEAPRIRPGIPESCQRRHTLEASEFPEDERAS---------FEIIRERFISVPEVCPGLFDEI------RHFLT-LCE-- 70 (190)
T ss_pred cccccCCCCChHHHHHHhccccccCChhHHHH---------HHHHHHHHhcchhhcchhhhhH------Hhhhh-hcc--
Confidence 34578999999999999999998885432111 1122222211211110011100 00000 012
Q ss_pred ecccCCcccccCCeEEEEEEeecccCC--CCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhc-CCCe
Q 026808 101 VGGLDGKFSLHRGYVAGILTVDTVADF--LPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRS 177 (233)
Q Consensus 101 ~~~~~~~~~~~~~~ivG~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~-g~~~ 177 (233)
+.++|.+.-...+.. ........+..+....|+.++|+|+||.+|.|..|+..-++..-.+ -.++
T Consensus 71 ------------~tLIghIigs~~~~E~lt~ESm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r 138 (190)
T KOG4144|consen 71 ------------GTLIGHIIGSLWDKERLTQESMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRR 138 (190)
T ss_pred ------------ccceehhhcccCcchhhhHHHHhhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccc
Confidence 566666654432211 1112223334445599999999999999999999999877776666 4556
Q ss_pred EEEEeecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcchhHHHHHhhh
Q 026808 178 IALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLL 227 (233)
Q Consensus 178 i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~~~~~~m~k~l 227 (233)
+.|.+. .+.+.||+++||+.++...... ..+...+.+.+.|-.++
T Consensus 139 ~~Li~h---~pLvPFYEr~gFk~vgp~~~~~--~~k~F~e~~w~dm~h~~ 183 (190)
T KOG4144|consen 139 AALICH---DPLVPFYERFGFKAVGPCAITV--GSKTFMELHWSDMGHPF 183 (190)
T ss_pred eeeeec---CCccchhHhcCceeeccccccc--ccchhHHHHHHHhcCHH
Confidence 777676 7789999999999999743321 11223344455665555
No 63
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=98.85 E-value=1.3e-08 Score=65.18 Aligned_cols=73 Identities=16% Similarity=0.198 Sum_probs=64.5
Q ss_pred CCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHH
Q 026808 112 RGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATK 191 (233)
Q Consensus 112 ~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~ 191 (233)
.|.+|..+..+. ++++..-++.|+|||+|+.+.++....+.+.++|++ ++.+|..+|..+++
T Consensus 7 eG~PVSW~lmdq-----------------tge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~~g~P-~Y~hv~~~N~~~~r 68 (89)
T PF08444_consen 7 EGNPVSWSLMDQ-----------------TGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHKLGFP-FYGHVDEDNEASQR 68 (89)
T ss_pred CCCEeEEEEecc-----------------cccccccccCHhHhcCCHHHHHHHHHHHHHHHCCCC-eEeehHhccHHHHH
Confidence 378888777653 277778899999999999999999999999999996 89999999999999
Q ss_pred HHHhCCCEEEe
Q 026808 192 LYKGQGFKCVK 202 (233)
Q Consensus 192 ~y~k~Gf~~~~ 202 (233)
+.+++||...-
T Consensus 69 ~~~~lg~~~~p 79 (89)
T PF08444_consen 69 LSKSLGFIFMP 79 (89)
T ss_pred HHHHCCCeecC
Confidence 99999998754
No 64
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=98.75 E-value=1.5e-08 Score=75.22 Aligned_cols=67 Identities=24% Similarity=0.283 Sum_probs=47.7
Q ss_pred CCeeEEEEEEEccCcccccHHHHHHHHHHHHH-------------------------HhcCCCeEEEEeecCChhhHHHH
Q 026808 139 TGIAYISNVAVREKFRRKGIAKRLIAKAEAQA-------------------------RGWGCRSIALHCDFNNLGATKLY 193 (233)
Q Consensus 139 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a-------------------------~~~g~~~i~l~~~~~n~~a~~~y 193 (233)
-..+.|.+++|+|++|++|+|++|++.+.+++ +..+++.+-...- -++.-.+||
T Consensus 88 l~g~RIvRIAvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~vDylGtSFG-~t~~Ll~FW 166 (196)
T PF13718_consen 88 LSGARIVRIAVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRPPGVDYLGTSFG-ATPELLKFW 166 (196)
T ss_dssp SEEEEEEEEEE-CCC-SSSHHHHHHHHHHHT-----------------------------S-SEEEEEEE---HHHHHHH
T ss_pred hcceeEEEEEEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccccCCCEEEeccC-CCHHHHHHH
Confidence 34588999999999999999999999999999 3557877655433 347889999
Q ss_pred HhCCCEEEecCCC
Q 026808 194 KGQGFKCVKVPEG 206 (233)
Q Consensus 194 ~k~Gf~~~~~~~~ 206 (233)
.|+||..+.....
T Consensus 167 ~k~gf~pv~l~~~ 179 (196)
T PF13718_consen 167 QKNGFVPVYLGQT 179 (196)
T ss_dssp HCTT-EEEEE-SS
T ss_pred HHCCcEEEEEecC
Confidence 9999999986543
No 65
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.74 E-value=1e-07 Score=57.43 Aligned_cols=57 Identities=32% Similarity=0.545 Sum_probs=47.9
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEE
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIAL 180 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l 180 (233)
++++|++.+..... ..+.+++..++|+|+|||+|+|++++..+++++.+.+++.+.+
T Consensus 8 ~~~ig~~~~~~~~~-----------~~~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~v~~ 64 (65)
T cd04301 8 GEIVGFASLSPDGS-----------GGDTAYIGDLAVLPEYRGKGIGSALLEAAEEEARERGAKRLRL 64 (65)
T ss_pred CEEEEEEEEEecCC-----------CCccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHHcCCcEEEe
Confidence 78999998865321 2244899889999999999999999999999999988888765
No 66
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=98.60 E-value=2e-06 Score=67.22 Aligned_cols=62 Identities=21% Similarity=0.192 Sum_probs=49.6
Q ss_pred eEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCCC
Q 026808 142 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGA 207 (233)
Q Consensus 142 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~ 207 (233)
..| .+.++|+|||+|+|+.+-..++..|.++|+.-.+ +..|.+++++-+|+||+.......+
T Consensus 190 ~EI-~I~T~~~yR~kGLA~~~aa~~I~~Cl~~~l~P~W---Dc~N~~S~~lA~kLGf~~~~~Y~~Y 251 (265)
T PF12746_consen 190 IEI-DIETHPEYRGKGLATAVAAAFILECLENGLYPSW---DCHNLASIALAEKLGFHFDFEYTAY 251 (265)
T ss_dssp EEE-EEEE-CCCTTSSHHHHHHHHHHHHHHHTT-EEE----EESSHHHHHHHHHCT--EEEEEEEE
T ss_pred EEE-EEEECHHhhcCCHHHHHHHHHHHHHHHCCCCcCe---eCCCHHHHHHHHHcCCcccceeeee
Confidence 777 7899999999999999999999999999865433 3369999999999999998876544
No 67
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.57 E-value=8.5e-07 Score=56.34 Aligned_cols=65 Identities=26% Similarity=0.335 Sum_probs=50.0
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
|+.+|.+.+.. .++.+.|....|.|++||+|+|+.|++.++++|+++|.+ |. +..+-+..+
T Consensus 8 g~~~a~l~Y~~--------------~~~~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~~~~k-v~----p~C~y~~~~ 68 (78)
T PF14542_consen 8 GEEIAELTYRE--------------DGGVIVITHTEVPPELRGQGIAKKLVEAALDYARENGLK-VV----PTCSYVAKY 68 (78)
T ss_dssp TTEEEEEEEEE--------------SSSEEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHHTT-E-EE----ETSHHHHHH
T ss_pred CEEEEEEEEEe--------------CCCEEEEEEEEECccccCCcHHHHHHHHHHHHHHHCCCE-EE----EECHHHHHH
Confidence 67888888754 234588999999999999999999999999999999874 33 444667777
Q ss_pred HHhC
Q 026808 193 YKGQ 196 (233)
Q Consensus 193 y~k~ 196 (233)
++++
T Consensus 69 ~~~h 72 (78)
T PF14542_consen 69 FRRH 72 (78)
T ss_dssp HHH-
T ss_pred HHhC
Confidence 7665
No 68
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=98.50 E-value=3.1e-06 Score=58.87 Aligned_cols=67 Identities=16% Similarity=0.097 Sum_probs=60.4
Q ss_pred CeeEEEEEEEccCcccccHHHHHHHHHHHHHHhc-CCCeEEEEeecCChhhHHHHHhCCCEEEecCCC
Q 026808 140 GIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 140 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~-g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~ 206 (233)
..+.+..+--.|..||+|+|++.+...+.++... ++......+..+|.+++++|+|++|..+.....
T Consensus 106 ~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~ns~ 173 (185)
T KOG4135|consen 106 ITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFYNSS 173 (185)
T ss_pred eeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHHhhheeeeeecc
Confidence 3577877888999999999999999999999887 999999999999999999999999999887443
No 69
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=98.45 E-value=2.6e-07 Score=81.14 Aligned_cols=82 Identities=22% Similarity=0.221 Sum_probs=62.4
Q ss_pred eeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcchhH
Q 026808 141 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKF 220 (233)
Q Consensus 141 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~~~~ 220 (233)
.+.|.+++|+|++|++|||++|++.+.++++ .+++.+-..- .-++.-.+||.||||.++...+...-..|.+ -
T Consensus 531 G~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~DwlgvsF-G~t~~L~rFW~rnGF~pVhls~~rn~~SGey-----s 603 (758)
T COG1444 531 GWRIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVSF-GYTEELLRFWLRNGFVPVHLSPTRNASSGEY-----T 603 (758)
T ss_pred eeeEEEEEeCHHHHhcCHHHHHHHHHHHHHh-cCCCEEeecc-CCCHHHHHHHHHcCeEEEEecCccCcCCCce-----e
Confidence 4889999999999999999999999999997 4676665443 3447889999999999999776543223332 2
Q ss_pred HHHHhhhcC
Q 026808 221 KFMMKLLKA 229 (233)
Q Consensus 221 ~~m~k~l~~ 229 (233)
+.|+|+|+.
T Consensus 604 ~i~lkpLs~ 612 (758)
T COG1444 604 AIVLKPLSD 612 (758)
T ss_pred EEEEecCCH
Confidence 466666654
No 70
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=98.22 E-value=3.2e-05 Score=62.34 Aligned_cols=155 Identities=14% Similarity=0.085 Sum_probs=78.3
Q ss_pred ceEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceec
Q 026808 23 EIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVG 102 (233)
Q Consensus 23 ~i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (233)
|+.|||++.+|+++|.+|...+-..--..|.+.+...+++......|..... ....+...++|.++..
T Consensus 1 M~viRp~~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sFa~~~~---------~~~~~~~YlfVLED~~--- 68 (342)
T PF04958_consen 1 MLVIRPARPSDLDALYALARESGPGFTSLPPDREALAERIERSERSFAGRDV---------DFPGDEGYLFVLEDTE--- 68 (342)
T ss_dssp -EEEEE--GGGHHHHHHHHHHS-TT-TTS-S-HHHHHHHHHHHHHHHH-TT-------------S--EEEEEEEETT---
T ss_pred CeEEecCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhhcccc---------CCCCccceEEEEEecC---
Confidence 4789999999999999999977542233455556666666666555522110 0112234556666421
Q ss_pred ccCCcccccCCeEEEEEEeecccCCCCCCCC-----------------------CCcCCCCeeEEEEEEEccCcccccHH
Q 026808 103 GLDGKFSLHRGYVAGILTVDTVADFLPRKGP-----------------------LRQRRTGIAYISNVAVREKFRRKGIA 159 (233)
Q Consensus 103 ~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~i~~l~V~p~~rg~Gig 159 (233)
.|+++|++.+...-.....+.. +.......-+|+.++++|+||+.|.|
T Consensus 69 ---------tg~vvGts~I~a~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G 139 (342)
T PF04958_consen 69 ---------TGEVVGTSAIEAAVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNG 139 (342)
T ss_dssp ---------T--EEEEEEEESSTTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHH
T ss_pred ---------CCcEEEEEeEEeccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchH
Confidence 2788888876542211110000 01112334788999999999999999
Q ss_pred HHHHHHHHHHHHhc--CC-CeEEEEee--cCChhhHHHHHhCCC
Q 026808 160 KRLIAKAEAQARGW--GC-RSIALHCD--FNNLGATKLYKGQGF 198 (233)
Q Consensus 160 ~~Ll~~~~~~a~~~--g~-~~i~l~~~--~~n~~a~~~y~k~Gf 198 (233)
+.|-+...=.+... .+ +.+..... .+-.+--.||...|-
T Consensus 140 ~lLSr~RfLFiA~~~~rF~~~viAElrG~~De~G~SPFWdalG~ 183 (342)
T PF04958_consen 140 RLLSRSRFLFIAQHRERFADRVIAELRGVSDEDGRSPFWDALGR 183 (342)
T ss_dssp HHHHHHHHHHHHH-GGGS-SEEEEE--B---TT---HHHHHTGG
T ss_pred HHHHHHHHHHHHhChhhcchheeeeccCCcCCCCCCchHHHhhc
Confidence 99976665554443 22 23333311 112344678877764
No 71
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=98.21 E-value=1.5e-05 Score=54.65 Aligned_cols=84 Identities=19% Similarity=0.204 Sum_probs=57.4
Q ss_pred CccceeeeecCceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHH
Q 026808 88 MDETFFLGSEDFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAE 167 (233)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~ 167 (233)
....++.+..| ++++|.+.+... +..+.|..++|++--||+|+|+.|++.+.
T Consensus 36 ~~~~l~aArFN--------------dRlLgAv~v~~~--------------~~~~~L~~l~VRevTRrRGVG~yLlee~~ 87 (128)
T PF12568_consen 36 EGHRLFAARFN--------------DRLLGAVKVTIS--------------GQQAELSDLCVREVTRRRGVGLYLLEEVL 87 (128)
T ss_dssp SSEEEEEEEET--------------TEEEEEEEEEEE--------------TTEEEEEEEEE-TT-SSSSHHHHHHHHHH
T ss_pred cCCeEEEEEec--------------hheeeeEEEEEc--------------CcceEEeeEEEeeccccccHHHHHHHHHH
Confidence 34666777777 789999888642 23489999999999999999999999999
Q ss_pred HHHHhcCCCeEEEEeec----CChhhHHHHHhCCCEEE
Q 026808 168 AQARGWGCRSIALHCDF----NNLGATKLYKGQGFKCV 201 (233)
Q Consensus 168 ~~a~~~g~~~i~l~~~~----~n~~a~~~y~k~Gf~~~ 201 (233)
..+ .++..+++.... +-.....|...+||...
T Consensus 88 rq~--p~i~~w~l~~~~~~~~~~~~~~~Fm~a~GF~~~ 123 (128)
T PF12568_consen 88 RQL--PDIKHWWLADEGVEPQDRAVMAAFMQACGFSAQ 123 (128)
T ss_dssp HHS---S--EEEE--TT-S--THHHHHHHHHHHT-EE-
T ss_pred HHC--CCCcEEEEecCCCcccchHHHHHHHHHcCcccc
Confidence 887 467777775432 22345688999999654
No 72
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=98.19 E-value=3.1e-06 Score=67.36 Aligned_cols=80 Identities=21% Similarity=0.220 Sum_probs=61.7
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
.++++.+.+.++. -.|....-.+..|..+++.|+|||+|..++|+...+...+++|+....|+. .+.++
T Consensus 48 qkl~s~L~i~~f~------~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~kG~p~s~L~P-----~s~~i 116 (389)
T COG4552 48 QKLASRLHIPPFI------FWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIARKGYPVSALHP-----FSGGI 116 (389)
T ss_pred hhhhhcccccchh------eeeCCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHHcCCeeEEecc-----Cchhh
Confidence 4566555543322 123344455689999999999999999999999999999999998777743 34889
Q ss_pred HHhCCCEEEec
Q 026808 193 YKGQGFKCVKV 203 (233)
Q Consensus 193 y~k~Gf~~~~~ 203 (233)
|+|+||+....
T Consensus 117 YrKfGye~asn 127 (389)
T COG4552 117 YRKFGYEYASN 127 (389)
T ss_pred Hhhccccccce
Confidence 99999998764
No 73
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=98.12 E-value=1.3e-05 Score=52.92 Aligned_cols=52 Identities=31% Similarity=0.392 Sum_probs=42.9
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCe
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRS 177 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~ 177 (233)
|..+|.+..... +.+...|..-+|.+++||+|+|++|+..+++.|++.|.+-
T Consensus 24 G~~~~e~~y~~~-------------~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~ki 75 (99)
T COG2388 24 GEVIGEATYYDR-------------GENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKI 75 (99)
T ss_pred CcEEEEEEEecC-------------CCCEEEEecCcCCHHHcCCcHHHHHHHHHHHHHHHcCCeE
Confidence 677777776442 2345889999999999999999999999999999988743
No 74
>PRK10456 arginine succinyltransferase; Provisional
Probab=98.06 E-value=7.1e-05 Score=60.23 Aligned_cols=156 Identities=13% Similarity=0.163 Sum_probs=87.5
Q ss_pred ceEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceec
Q 026808 23 EIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVG 102 (233)
Q Consensus 23 ~i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (233)
++.|||++.+|+++|.+|...+-..--..|.+.....+++....+.|... ....+...++|.++.
T Consensus 1 M~vvRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~-----------~~~~~~~YlFVLED~---- 65 (344)
T PRK10456 1 MMVIRPVERSDLAALMQLAGKTGGGLTSLPANEATLAARIERALKTWQGE-----------LPKSEQGYVFVLEDS---- 65 (344)
T ss_pred CeEEecCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCc-----------CCCCCccEEEEEEeC----
Confidence 37899999999999999998775433334555566666666666555221 111334556666642
Q ss_pred ccCCcccccCCeEEEEEEeecccCCCCC------------CCC-----------CCcCCCCeeEEEEEEEccCcccccHH
Q 026808 103 GLDGKFSLHRGYVAGILTVDTVADFLPR------------KGP-----------LRQRRTGIAYISNVAVREKFRRKGIA 159 (233)
Q Consensus 103 ~~~~~~~~~~~~ivG~~~~~~~~~~~~~------------~~~-----------~~~~~~~~~~i~~l~V~p~~rg~Gig 159 (233)
+.|+++|++.+...-..... ... ........-+|+.++++|+||+.|.|
T Consensus 66 --------~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G 137 (344)
T PRK10456 66 --------ETGTVAGICAIEVAVGLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNG 137 (344)
T ss_pred --------CCCcEEEEEeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCch
Confidence 12778888765431111000 000 01112334678999999999999999
Q ss_pred HHHHHHHHHHHHhc--CC-CeEEEEe--ecCChhhHHHHHhCCCEEE
Q 026808 160 KRLIAKAEAQARGW--GC-RSIALHC--DFNNLGATKLYKGQGFKCV 201 (233)
Q Consensus 160 ~~Ll~~~~~~a~~~--g~-~~i~l~~--~~~n~~a~~~y~k~Gf~~~ 201 (233)
+.|-+...=.+... -+ +.+.... ..+..+.-.||...|-...
T Consensus 138 ~LLSr~RfLFiA~~~erF~~~viAEmRG~~De~G~SPFWd~lg~hFF 184 (344)
T PRK10456 138 YLLSKSRFMFMAAFRDKFNDKVVAEMRGVIDEHGYSPFWQSLGKRFF 184 (344)
T ss_pred hHHHHHHHHHHHhhHhhhhhhhheeccCccCCCCCCccHHHhhcccc
Confidence 98865544443322 11 1122211 1112344567777775543
No 75
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=97.95 E-value=0.00025 Score=52.66 Aligned_cols=135 Identities=16% Similarity=0.210 Sum_probs=83.3
Q ss_pred cccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceecccCCcccc
Q 026808 31 IEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGLDGKFSL 110 (233)
Q Consensus 31 ~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (233)
.++++++..+-.+.|.+......... +. ...++| +++...++++.++
T Consensus 7 ~~~l~~~~rlR~~vFv~rlgW~v~~~---dg--~E~Dqy----------------D~~~~~ylv~~~~------------ 53 (182)
T PF00765_consen 7 RRLLEEMFRLRHRVFVDRLGWDVPCE---DG--MEIDQY----------------DDPDAVYLVALDD------------ 53 (182)
T ss_dssp HHHHHHHHHHHHHHHTTCSCCCHHCC---TS--EE--TT----------------GCTT-EEEEEEET------------
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCcCC---CC--cEeeec----------------CCCCCeEEEEEEC------------
Confidence 45678888888888886543321000 00 011111 1233556666666
Q ss_pred cCCeEEEEEEeecccC------CCCC--CCCCCcCCCCeeEEEEEEEccCccc------ccHHHHHHHHHHHHHHhcCCC
Q 026808 111 HRGYVAGILTVDTVAD------FLPR--KGPLRQRRTGIAYISNVAVREKFRR------KGIAKRLIAKAEAQARGWGCR 176 (233)
Q Consensus 111 ~~~~ivG~~~~~~~~~------~~~~--~~~~~~~~~~~~~i~~l~V~p~~rg------~Gig~~Ll~~~~~~a~~~g~~ 176 (233)
|+++|++.+.+-.. ..+. .........+.|++.+++|+++.++ .-+...|+..+.++|..+|++
T Consensus 54 --g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~~gi~ 131 (182)
T PF00765_consen 54 --GRVVGCARLLPTTGPYMLSDVFPHLLPDGPAPRSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALSNGIR 131 (182)
T ss_dssp --TEEEEEEEEEETTS--HHHHCTGGGHTTS---SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHCTT-S
T ss_pred --CEEEEEeeeccCCCcchhhhHHHHHhCCCCCCCCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHHCCCC
Confidence 78888887654110 0111 0112223467899999999998543 246789999999999999999
Q ss_pred eEEEEeecCChhhHHHHHhCCCEEEec
Q 026808 177 SIALHCDFNNLGATKLYKGQGFKCVKV 203 (233)
Q Consensus 177 ~i~l~~~~~n~~a~~~y~k~Gf~~~~~ 203 (233)
.+...+. .+..+++++.||.....
T Consensus 132 ~~v~V~~---~~~~r~l~r~G~~~~~l 155 (182)
T PF00765_consen 132 HIVGVVD---PAMERILRRAGWPVRRL 155 (182)
T ss_dssp EEEEEEE---HHHHHHHHHCT-EEEES
T ss_pred EEEEEEC---hHHHHHHHHcCCceEEC
Confidence 9988887 77899999999997754
No 76
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.93 E-value=1.5e-05 Score=53.99 Aligned_cols=44 Identities=34% Similarity=0.437 Sum_probs=40.6
Q ss_pred EEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCC
Q 026808 147 VAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGF 198 (233)
Q Consensus 147 l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf 198 (233)
++|+|+|||+|+|+.|+..++++++..|+. .|..+..+|.++||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~g~~--------~~~~~~~~~~~~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARKRGIS--------LNRLALEVYEKNGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHHcCce--------ehHHHHHHHHhcCC
Confidence 999999999999999999999999997765 56888999999998
No 77
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.90 E-value=0.00017 Score=56.21 Aligned_cols=74 Identities=20% Similarity=0.248 Sum_probs=63.0
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
++++++..+-. --|.-++|+|.+||-|++-+|+..+++.+.++|...+.+.+-+.+ ..+
T Consensus 46 ~~iiacGsiaG------------------nvikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~---~~l 104 (352)
T COG3053 46 EEIIACGSIAG------------------NVIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEY---AAL 104 (352)
T ss_pred CcEEEeccccc------------------ceeEEEEechhcccccHHHHHHHHHHHHHHHcCCceEEEEechhH---HHH
Confidence 78888877632 355678999999999999999999999999999999999998544 899
Q ss_pred HHhCCCEEEecCCCC
Q 026808 193 YKGQGFKCVKVPEGA 207 (233)
Q Consensus 193 y~k~Gf~~~~~~~~~ 207 (233)
|+.+||..+...+..
T Consensus 105 Fk~~GF~~i~~~~~~ 119 (352)
T COG3053 105 FKQCGFSEIASAENV 119 (352)
T ss_pred HHhCCceEeeccCce
Confidence 999999998876553
No 78
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=97.86 E-value=0.0001 Score=49.54 Aligned_cols=74 Identities=18% Similarity=0.151 Sum_probs=55.4
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
+.++|++.+-.... .+.+..+.+..+++...|||+|+|++..+++...... ...+-+..+|..|+.+
T Consensus 46 ~~~igf~l~L~~~~---------~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~g----~w~Va~i~EN~PA~~f 112 (143)
T COG5628 46 GLPVGFALVLDLAH---------SPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAWG----VWQVATVRENTPARAF 112 (143)
T ss_pred CceeeeeeeecccC---------CCCcccccchheEeeehhhccchhHHHHHHHHHHhhc----eEEEEEeccCChhHHH
Confidence 68889887643221 1222336777889999999999999999999887754 3455567899999999
Q ss_pred HHhCCCE
Q 026808 193 YKGQGFK 199 (233)
Q Consensus 193 y~k~Gf~ 199 (233)
+++.-+.
T Consensus 113 wK~~~~t 119 (143)
T COG5628 113 WKRVAET 119 (143)
T ss_pred HHhhhcc
Confidence 9987554
No 79
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=97.86 E-value=0.00078 Score=51.19 Aligned_cols=64 Identities=14% Similarity=0.169 Sum_probs=52.3
Q ss_pred CCCCeeEEEEEEEccCcccc---c----HHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEec
Q 026808 137 RRTGIAYISNVAVREKFRRK---G----IAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKV 203 (233)
Q Consensus 137 ~~~~~~~i~~l~V~p~~rg~---G----ig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~ 203 (233)
...+.+++..++|+|++++. + +...|+..+.+++..+|++.++..+. +...+++.++||.....
T Consensus 95 ~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~---~~~~r~l~r~G~~~~~l 165 (207)
T PRK13834 95 AHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMANGYTEIVTATD---LRFERILARAGWPMQRL 165 (207)
T ss_pred CCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHHCCCCEEEEEEC---HHHHHHHHHcCCCeEEC
Confidence 35679999999999986422 2 66789999999999999999888776 56788999999987543
No 80
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=97.72 E-value=0.00042 Score=55.75 Aligned_cols=152 Identities=14% Similarity=0.166 Sum_probs=85.1
Q ss_pred EEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceeccc
Q 026808 25 VVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGL 104 (233)
Q Consensus 25 ~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (233)
.|||++.+|+++|.+|...+-..--..|.+.....+++....+.|... ....+...++|.++.
T Consensus 1 vvRPv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~-----------~~~~~~~YlFVLEDt------ 63 (336)
T TIGR03244 1 IVRPVETSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSGE-----------LTRAEQGYLFVLEDT------ 63 (336)
T ss_pred CcccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCc-----------CCCCCccEEEEEEeC------
Confidence 389999999999999998775433334555566666666666555222 121334556666652
Q ss_pred CCcccccCCeEEEEEEeecccCCCCC------------CCC-----------CCcCCCCeeEEEEEEEccCcccccHHHH
Q 026808 105 DGKFSLHRGYVAGILTVDTVADFLPR------------KGP-----------LRQRRTGIAYISNVAVREKFRRKGIAKR 161 (233)
Q Consensus 105 ~~~~~~~~~~ivG~~~~~~~~~~~~~------------~~~-----------~~~~~~~~~~i~~l~V~p~~rg~Gig~~ 161 (233)
+.|+++|++.+...-..... ... ........-+|+.++++|+||+.|.|+.
T Consensus 64 ------~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~L 137 (336)
T TIGR03244 64 ------ETGTVAGVSAIEAAVGLEEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRL 137 (336)
T ss_pred ------CCCeEEEEEeEEecccCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhh
Confidence 12778888765431111000 000 0111233467899999999999999998
Q ss_pred HHHHHHHHHHhc--C-----CCeEEEEeecCChhhHHHHHhCCCEEE
Q 026808 162 LIAKAEAQARGW--G-----CRSIALHCDFNNLGATKLYKGQGFKCV 201 (233)
Q Consensus 162 Ll~~~~~~a~~~--g-----~~~i~l~~~~~n~~a~~~y~k~Gf~~~ 201 (233)
|-+...=.+... - +..+.-..++ .+--.||...|-...
T Consensus 138 LSr~RfLFiA~~~erF~~~viAEmrG~~De--~G~SPFWd~lg~hFF 182 (336)
T TIGR03244 138 LSKSRFLFIAQFRERFSKKIIAEMRGVSDE--QGRSPFWNALGRHFF 182 (336)
T ss_pred HHHHHHHHHHhhHhhhhhhhhhhhcCccCC--CCCCchHHHhhcccc
Confidence 865544333321 1 1111111222 344567777775543
No 81
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=97.71 E-value=0.00057 Score=54.95 Aligned_cols=154 Identities=14% Similarity=0.181 Sum_probs=85.2
Q ss_pred EEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceeccc
Q 026808 25 VVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGL 104 (233)
Q Consensus 25 ~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (233)
.|||++.+|+++|.+|...+-..--..|.+.....+++....+.|... . ...+...++|.++.
T Consensus 1 vvRpv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~-~----------~~~~~~YlFVLED~------ 63 (335)
T TIGR03243 1 IVRPVRTSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAGE-S----------TRGEEGYLFVLEDT------ 63 (335)
T ss_pred CcccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhcc-c----------CCCCccEEEEEEeC------
Confidence 389999999999999988774433334555556666666665554221 1 11234455666642
Q ss_pred CCcccccCCeEEEEEEeecccCCCCC------------CCC-----------CCcCCCCeeEEEEEEEccCcccccHHHH
Q 026808 105 DGKFSLHRGYVAGILTVDTVADFLPR------------KGP-----------LRQRRTGIAYISNVAVREKFRRKGIAKR 161 (233)
Q Consensus 105 ~~~~~~~~~~ivG~~~~~~~~~~~~~------------~~~-----------~~~~~~~~~~i~~l~V~p~~rg~Gig~~ 161 (233)
+.|+++|++.+...-..... ... ........-+|+.++++|+||+.|.|+.
T Consensus 64 ------~tg~vvGts~I~a~vG~~~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~L 137 (335)
T TIGR03243 64 ------ETGTVAGVSAIEAAVGLDEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRL 137 (335)
T ss_pred ------CCCeEEEEEeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhh
Confidence 12788888765431111000 000 0111233467899999999999999998
Q ss_pred HHHHHHHHHHhc--CC-CeEEEEe--ecCChhhHHHHHhCCCEEE
Q 026808 162 LIAKAEAQARGW--GC-RSIALHC--DFNNLGATKLYKGQGFKCV 201 (233)
Q Consensus 162 Ll~~~~~~a~~~--g~-~~i~l~~--~~~n~~a~~~y~k~Gf~~~ 201 (233)
|-+...-.+... -+ +.+.... ..+-.+--.||...|-...
T Consensus 138 LSr~RfLFiA~~~erF~~~viAEmrG~~De~G~SPFWd~lg~hFF 182 (335)
T TIGR03243 138 LSRSRFLFIAAFRERFGDKIIAEMRGVSDEQGRSPFWEALGRHFF 182 (335)
T ss_pred HHHHHHHHHHhhHhhhhhhheeeccCccCCCCCCccHHHhhcccc
Confidence 865544443322 11 1222221 1111344567777775543
No 82
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=97.70 E-value=0.00056 Score=55.02 Aligned_cols=155 Identities=13% Similarity=0.157 Sum_probs=84.8
Q ss_pred EEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceeccc
Q 026808 25 VVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGL 104 (233)
Q Consensus 25 ~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (233)
.|||++.+|+++|.+|...+-..--..|.+.....+++....+.|..... ...+...++|.++.
T Consensus 1 viRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~----------~~~~~~YlFVLEDt------ 64 (336)
T TIGR03245 1 IVRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVS----------FVGEERYLFVLEDT------ 64 (336)
T ss_pred CcccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHHhhcC----------CCCCccEEEEEEeC------
Confidence 38999999999999999877543333455555566666655555422111 11234555666642
Q ss_pred CCcccccCCeEEEEEEeecccCCCCC------------CCC-----------CCcCCCCeeEEEEEEEccCcccccHHHH
Q 026808 105 DGKFSLHRGYVAGILTVDTVADFLPR------------KGP-----------LRQRRTGIAYISNVAVREKFRRKGIAKR 161 (233)
Q Consensus 105 ~~~~~~~~~~ivG~~~~~~~~~~~~~------------~~~-----------~~~~~~~~~~i~~l~V~p~~rg~Gig~~ 161 (233)
+.|+++|++.+...-..... ... ........-+|+.++++|+||+.|.|+.
T Consensus 65 ------~tg~vvGts~I~a~vG~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~l 138 (336)
T TIGR03245 65 ------ETGKLLGTSSIVASAGYGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAEL 138 (336)
T ss_pred ------CCCcEEEEEeEEecccCCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhH
Confidence 12778888765431111000 000 0111233467899999999999999998
Q ss_pred HHHHHHHHHHhc--CC-CeEEEEe--ecCChhhHHHHHhCCCEEE
Q 026808 162 LIAKAEAQARGW--GC-RSIALHC--DFNNLGATKLYKGQGFKCV 201 (233)
Q Consensus 162 Ll~~~~~~a~~~--g~-~~i~l~~--~~~n~~a~~~y~k~Gf~~~ 201 (233)
|-+...-.+... -+ +.+.... ..+-.+--.||...|-...
T Consensus 139 LSr~RfLFiA~~~erF~~~viAEmrG~~De~G~SPFWd~lg~hFF 183 (336)
T TIGR03245 139 LSRARLLFMAAHRERFQSRIIVEIQGVQDDNGDSPFWDAIGRHFF 183 (336)
T ss_pred HHHHHHHHHHhhHhhhhhhheeeccCccCCCCCCccHHHhhcccc
Confidence 865544443322 11 1222221 1111344567777775543
No 83
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=97.60 E-value=0.0036 Score=47.09 Aligned_cols=139 Identities=17% Similarity=0.102 Sum_probs=91.3
Q ss_pred ceEEEeCC-cccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCcee
Q 026808 23 EIVVREAR-IEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKV 101 (233)
Q Consensus 23 ~i~iR~~~-~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (233)
.+.+|.++ +.+++++..++..++..+-... .....+..+.. ..+..+.++.+
T Consensus 2 ~vvvrrl~dp~el~~~~dV~~~aWg~~d~~~----~~~d~i~al~~--------------------~GGlvlgAf~~--- 54 (266)
T COG3375 2 KVVVRRLTDPAELDEAEDVQASAWGSEDRDG----APADTIRALRY--------------------HGGLVLGAFSA--- 54 (266)
T ss_pred ceeEEecCCHHHHHHHHHHHHHHhCcccccc----chHHHHHHHHh--------------------cCCeEEEEEcC---
Confidence 46677764 6788888888887765332211 11111222211 23555666655
Q ss_pred cccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEE
Q 026808 102 GGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALH 181 (233)
Q Consensus 102 ~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~ 181 (233)
++++||...-.+. .....-..|-+.++|.|++++.|+|-+|=..--+++.++|++.+.-+
T Consensus 55 ----------dg~lVGls~G~pg----------~r~g~~y~ySH~~gV~e~~k~sglg~aLK~~Qre~a~~~G~tli~WT 114 (266)
T COG3375 55 ----------DGRLVGLSYGYPG----------GRGGSLYLYSHMLGVREEVKGSGLGVALKMKQRERALSMGYTLIAWT 114 (266)
T ss_pred ----------CCcEEEEEeccCC----------cCCCceeeeeeehhccccccccchhhhhHHHHHHHHHhcCeeeEEEe
Confidence 2588887764320 00112246778899999999999999998888889999999999888
Q ss_pred eecCChhhHHH-HHhCCCEEEecCCCCC
Q 026808 182 CDFNNLGATKL-YKGQGFKCVKVPEGAN 208 (233)
Q Consensus 182 ~~~~n~~a~~~-y~k~Gf~~~~~~~~~~ 208 (233)
.++-|.....| ..|+|-....-.++++
T Consensus 115 fDPl~alNA~fNi~KLGa~artYi~nfY 142 (266)
T COG3375 115 FDPLNALNARFNISKLGAIARTYIKNFY 142 (266)
T ss_pred cccchhhhhhcchhhhceeEEEeecccc
Confidence 88877766655 5788876666556654
No 84
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.58 E-value=0.0019 Score=45.51 Aligned_cols=115 Identities=14% Similarity=0.047 Sum_probs=73.7
Q ss_pred ceEEEeC-CcccHHHHHhhhhhccCCC-CCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCce
Q 026808 23 EIVVREA-RIEDIWEVAETHCSCFFPN-YTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFK 100 (233)
Q Consensus 23 ~i~iR~~-~~~D~~~i~~l~~~~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (233)
.+.++.. .++|++.+.+++.+.+... -.... ....+.+..+...+ .......++++..+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~---------------~~~~~~~l~~~~~~-- 79 (142)
T PF13480_consen 19 GVRFEVATDPADLEAFYELYRESWARRHGGFAP--PFSRDFFRDLLRSL---------------AESGRLRLFVLYDG-- 79 (142)
T ss_pred CEEEEEeCCHHHHHHHHHHHHHHHhhhhCCCCC--cchHHHHHHHHHhh---------------ccCCCEEEEEEEEC--
Confidence 3666654 5778899888887665433 21100 11222233333321 11222455555566
Q ss_pred ecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEE
Q 026808 101 VGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIAL 180 (233)
Q Consensus 101 ~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l 180 (233)
|++||+...... ++..+....+++|+|+..++|..|+..++++|.+.|++.+-+
T Consensus 80 ------------g~~va~~~~~~~--------------~~~~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~~g~~~~d~ 133 (142)
T PF13480_consen 80 ------------GEPVAFALGFRH--------------GGTLYYWYGGYDPEYRKYSPGRLLLWEAIRWAIERGLRYFDF 133 (142)
T ss_pred ------------CEEEEEEEEEEE--------------CCEEEEEEEEECHhhHhCCHHHHHHHHHHHHHHHCCCCEEEE
Confidence 787877765432 123677788999999999999999999999999999988776
Q ss_pred Ee
Q 026808 181 HC 182 (233)
Q Consensus 181 ~~ 182 (233)
..
T Consensus 134 g~ 135 (142)
T PF13480_consen 134 GG 135 (142)
T ss_pred CC
Confidence 44
No 85
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=97.55 E-value=0.0015 Score=50.88 Aligned_cols=64 Identities=27% Similarity=0.286 Sum_probs=54.0
Q ss_pred CCCeeEEEEEEEccCcccc--------c--------------------HHHHHHHHHHHHHHhcCCCeEEEEeecCChhh
Q 026808 138 RTGIAYISNVAVREKFRRK--------G--------------------IAKRLIAKAEAQARGWGCRSIALHCDFNNLGA 189 (233)
Q Consensus 138 ~~~~~~i~~l~V~p~~rg~--------G--------------------ig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a 189 (233)
..+.+++.+++|+|+||++ | +...|+..+.+++...|++.++..+. +..
T Consensus 108 ~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~v~~---~~l 184 (241)
T TIGR03694 108 RSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALSSANGITHWYAIME---PRL 184 (241)
T ss_pred CCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHHHHCCCcEEEEEeC---HHH
Confidence 4678999999999999974 2 56789999999999999999888776 667
Q ss_pred HHHHHhCCCEEEecC
Q 026808 190 TKLYKGQGFKCVKVP 204 (233)
Q Consensus 190 ~~~y~k~Gf~~~~~~ 204 (233)
.+++.+.|+.....-
T Consensus 185 ~r~l~r~G~~~~~lG 199 (241)
T TIGR03694 185 ARLLSRFGIQFRQVG 199 (241)
T ss_pred HHHHHHhCCceEEcC
Confidence 889999998775543
No 86
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=97.50 E-value=0.00094 Score=45.20 Aligned_cols=81 Identities=21% Similarity=0.218 Sum_probs=50.7
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
+.++|++.+....-+.-.............-|..++|+++.|++|+|++|++..++.- ++.-..+.++.-.+....|
T Consensus 18 g~viG~LKVG~K~Lfl~d~~g~~~e~~~~~cvLDFyVhes~QR~G~Gk~LF~~ML~~e---~~~p~~~a~DrPS~Kll~F 94 (120)
T PF05301_consen 18 GAVIGFLKVGYKKLFLLDERGQHREIEPLLCVLDFYVHESRQRRGYGKRLFDHMLQEE---NVSPHQLAIDRPSPKLLSF 94 (120)
T ss_pred ceEEEEEEEeeeeEEEEcCCCCEEEecccceeeeEEEEeceeccCchHHHHHHHHHHc---CCCcccceecCCcHHHHHH
Confidence 7889998765422222111111111122225568999999999999999999998844 3444444455555667777
Q ss_pred HHhC
Q 026808 193 YKGQ 196 (233)
Q Consensus 193 y~k~ 196 (233)
.+|+
T Consensus 95 l~Kh 98 (120)
T PF05301_consen 95 LKKH 98 (120)
T ss_pred HHHh
Confidence 7776
No 87
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.38 E-value=0.00066 Score=56.72 Aligned_cols=141 Identities=16% Similarity=0.115 Sum_probs=94.9
Q ss_pred CCCCCceEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeec
Q 026808 18 XXXSPEIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSE 97 (233)
Q Consensus 18 ~~~~~~i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (233)
....+.+++++..+-+++.|.+|....-.-..+.. +-..+.+..+.. ++....+-..-
T Consensus 408 K~Lem~l~vs~~de~~i~RIsQLtqkTNQFnlTtk---Ry~e~dV~~~~~-------------------~~~~li~sv~l 465 (574)
T COG3882 408 KNLEMRLTVSKFDEVNIPRISQLTQKTNQFNLTTK---RYNEEDVRQMQE-------------------DPNFLIFSVSL 465 (574)
T ss_pred hhheEEEEEeeccccCcHHHHHHhhcccceeechh---hhcHHHHHHHhh-------------------CCCeEEEEEEe
Confidence 34557789999999999999999986643233221 111222222211 11111111111
Q ss_pred CceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCe
Q 026808 98 DFKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRS 177 (233)
Q Consensus 98 ~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~ 177 (233)
.++ ..++-++|++.+.... +.|.|+.+...=..=|++|-++||..+++.|...|+..
T Consensus 466 ~DK---------fgDnGiigvviv~kk~--------------~~w~IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~t 522 (574)
T COG3882 466 KDK---------FGDNGIIGVVIVEKKE--------------SEWFIDTFLMSCRVLGRKVEQRLMNSLEEQALSEGINT 522 (574)
T ss_pred ccc---------cccCceEEEEEEEecC--------------CeEEhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcce
Confidence 111 1136788988886522 33888888888888899999999999999999999999
Q ss_pred EEEE--eecCChhhHHHHHhCCCEEEec
Q 026808 178 IALH--CDFNNLGATKLYKGQGFKCVKV 203 (233)
Q Consensus 178 i~l~--~~~~n~~a~~~y~k~Gf~~~~~ 203 (233)
+... ....|..-..||+++||+..++
T Consensus 523 ir~~Y~pt~kN~pv~~FyE~mgf~l~~e 550 (574)
T COG3882 523 IRGYYIPTEKNAPVSDFYERMGFKLKGE 550 (574)
T ss_pred eeeEecccccCCcHHHHHHHhccccccc
Confidence 9887 4557888899999999995553
No 88
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=97.36 E-value=0.01 Score=43.78 Aligned_cols=81 Identities=14% Similarity=0.142 Sum_probs=49.3
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
.++|+.+.........+ ...+...+++..+++|+|||+|+++.+-..+.+..+. .-.-+.+.. |..+.++
T Consensus 56 ~~via~~~~~~~~~l~~------~~d~pl~~~G~~w~~p~yRg~~~~kl~~~~~~~~~~~-~~~N~~~~~---~~~~~~~ 125 (181)
T PF06852_consen 56 DRVIATVHLIRFDPLNP------SPDKPLQFIGFFWIDPEYRGKGIMKLQDDICMDELDS-VDDNSVAQG---NVKMSNF 125 (181)
T ss_pred CcEEEEEEEEEeccCCC------CCCCCeEEEeeeeeCCcccCcchHHHHHHHHHHHhcc-CCCceeeec---CHHHHHH
Confidence 56777666543221111 1124458999999999999999996444444444433 333344433 3677888
Q ss_pred HHhC-CCEEEec
Q 026808 193 YKGQ-GFKCVKV 203 (233)
Q Consensus 193 y~k~-Gf~~~~~ 203 (233)
|.+. ||...+-
T Consensus 126 w~k~~G~~~~~h 137 (181)
T PF06852_consen 126 WHKMFGFDDYGH 137 (181)
T ss_pred HHHHhCCCCCcc
Confidence 8765 9876664
No 89
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=97.34 E-value=0.00082 Score=52.22 Aligned_cols=118 Identities=17% Similarity=0.177 Sum_probs=67.2
Q ss_pred ceEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceec
Q 026808 23 EIVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVG 102 (233)
Q Consensus 23 ~i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (233)
++.+||++..|+++|.+|...+=..--..|.+......++..-...| .......+...+++.++..
T Consensus 1 mlvvRP~~~aDl~al~~LA~~sg~G~TsLP~de~~L~~Ri~~se~sf-----------~~~~~~ge~~Y~fVLEDse--- 66 (336)
T COG3138 1 MLVVRPVERADLEALMELAVKTGVGLTSLPADEATLRARIERSEKSF-----------QGELPPGEAGYLFVLEDSE--- 66 (336)
T ss_pred CcccccccccCHHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHHHHH-----------hcccCCCCccEEEEEEecC---
Confidence 36799999999999999998764433334555455555555444433 2223334455666666621
Q ss_pred ccCCcccccCCeEEEEEEeecccCCCCC------------CCCC-----------CcCCCCeeEEEEEEEccCcccccHH
Q 026808 103 GLDGKFSLHRGYVAGILTVDTVADFLPR------------KGPL-----------RQRRTGIAYISNVAVREKFRRKGIA 159 (233)
Q Consensus 103 ~~~~~~~~~~~~ivG~~~~~~~~~~~~~------------~~~~-----------~~~~~~~~~i~~l~V~p~~rg~Gig 159 (233)
.|+++|+..+......... ...+ .+......+++.++++|++|.-|-|
T Consensus 67 ---------tG~VvG~saI~a~vGl~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG 137 (336)
T COG3138 67 ---------TGTVVGISAIEAAVGLNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNG 137 (336)
T ss_pred ---------CceEEeEEEEEEeeccCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccch
Confidence 2666666654321111000 0000 0111223567889999999988877
Q ss_pred HHHH
Q 026808 160 KRLI 163 (233)
Q Consensus 160 ~~Ll 163 (233)
..|-
T Consensus 138 ~Lls 141 (336)
T COG3138 138 RLLS 141 (336)
T ss_pred hhhh
Confidence 7554
No 90
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=97.33 E-value=0.0028 Score=45.34 Aligned_cols=60 Identities=18% Similarity=0.216 Sum_probs=42.2
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeE
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSI 178 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i 178 (233)
+++||++...+..- .......+..+|..++|++.+|.++++--|++.+...+...|+-..
T Consensus 88 ~kLvgfIsaip~~i------rv~~~~~~~~eINFLCVhKklRskrlAPvLIkEItRRvn~~gI~qA 147 (162)
T PF01233_consen 88 KKLVGFISAIPATI------RVRDKVIKMVEINFLCVHKKLRSKRLAPVLIKEITRRVNLQGIWQA 147 (162)
T ss_dssp TEEEEEEEEEEEEE------EETTEEEEEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHHTTT--EE
T ss_pred CEEEEEEccceEEE------EEeeeEeeeeeEEEEeecHhHhhcCCcHHHHHHHHHHhhhcCceee
Confidence 78888876533111 0111223468999999999999999999999999999988876543
No 91
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=97.32 E-value=0.00034 Score=42.87 Aligned_cols=29 Identities=41% Similarity=0.494 Sum_probs=26.0
Q ss_pred eEEEEEEEccCcccccHHHHHHHHHHHHH
Q 026808 142 AYISNVAVREKFRRKGIAKRLIAKAEAQA 170 (233)
Q Consensus 142 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a 170 (233)
+-|..++|+|.+|++|||++||+.+....
T Consensus 6 ~GI~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 6 CGISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred EEeEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 67889999999999999999999887753
No 92
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=97.26 E-value=0.00031 Score=58.21 Aligned_cols=50 Identities=22% Similarity=0.494 Sum_probs=43.5
Q ss_pred ccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEe
Q 026808 150 REKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVK 202 (233)
Q Consensus 150 ~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~ 202 (233)
...||.+|+|++||+.++..|++.+...|.+..- .++..+|+|+||+..|
T Consensus 459 ~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSg---iG~ReYy~k~GY~~~g 508 (515)
T COG1243 459 EDEWQHRGYGRELLEEAERIAREEGAKKILVISG---IGVREYYRKLGYELDG 508 (515)
T ss_pred cchhhcccHHHHHHHHHHHHHHhhccccEEEEec---ccHHHHHHHhCccccC
Confidence 4789999999999999999999998777765443 7889999999999876
No 93
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.06 E-value=0.02 Score=42.83 Aligned_cols=90 Identities=21% Similarity=0.276 Sum_probs=63.1
Q ss_pred CeEEEEEEeeccc------CCCCC--CCCCCcCCCCeeEEEEEEEcc--Cccc---cc-HHHHHHHHHHHHHHhcCCCeE
Q 026808 113 GYVAGILTVDTVA------DFLPR--KGPLRQRRTGIAYISNVAVRE--KFRR---KG-IAKRLIAKAEAQARGWGCRSI 178 (233)
Q Consensus 113 ~~ivG~~~~~~~~------~~~~~--~~~~~~~~~~~~~i~~l~V~p--~~rg---~G-ig~~Ll~~~~~~a~~~g~~~i 178 (233)
|+++|++.+-+-- +..+. .+.......+.|+...++|++ .-+. .. ++..|+.-+++++..+|++.|
T Consensus 62 g~I~G~~RlLptt~P~mL~~vF~~Ll~~~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G~~~I 141 (209)
T COG3916 62 GRIVGCVRLLPTTGPYMLTDVFPALLEGGPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARGITGI 141 (209)
T ss_pred CcEEEEEEeccCCCcchhhhhhHHHhcCCCCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHHcCCceE
Confidence 8999999864311 00110 111222344689999998886 2222 22 467899999999999999999
Q ss_pred EEEeecCChhhHHHHHhCCCEEEecCC
Q 026808 179 ALHCDFNNLGATKLYKGQGFKCVKVPE 205 (233)
Q Consensus 179 ~l~~~~~n~~a~~~y~k~Gf~~~~~~~ 205 (233)
...+. .+..+.+++.||......+
T Consensus 142 vtVt~---~~meril~r~Gw~~~riG~ 165 (209)
T COG3916 142 VTVTD---TGMERILRRAGWPLTRIGP 165 (209)
T ss_pred EEEEc---hHHHHHHHHcCCCeEEcCC
Confidence 98887 7889999999998776543
No 94
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=96.49 E-value=0.0056 Score=49.15 Aligned_cols=48 Identities=29% Similarity=0.486 Sum_probs=39.9
Q ss_pred CcccccHHHHHHHHHHHHHHhc-CCCeEEEEeecCChhhHHHHHhCCCEEEe
Q 026808 152 KFRRKGIAKRLIAKAEAQARGW-GCRSIALHCDFNNLGATKLYKGQGFKCVK 202 (233)
Q Consensus 152 ~~rg~Gig~~Ll~~~~~~a~~~-g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~ 202 (233)
.||.+|+|+.||+.++..|++. |-..|.+..- -+..++|.|+||+..+
T Consensus 498 KfQHQG~GtLLmeEAERIAr~EHgS~KiavISG---VGtR~YY~klGY~LdG 546 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAREEHGSGKIAVISG---VGTRNYYRKLGYELDG 546 (554)
T ss_pred hhhhcchhhHHHHHHHHHHHHhcCCCceEEEec---cchHHHHHhhCeeecC
Confidence 6999999999999999999986 7777655433 4558899999999766
No 95
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=96.41 E-value=0.02 Score=46.06 Aligned_cols=57 Identities=18% Similarity=0.190 Sum_probs=42.2
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCC
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGC 175 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~ 175 (233)
+++||++...+. .-....+..+.+.|..++|+++.|+++++--|++.+...+.-.|+
T Consensus 145 ~kLVaFIsaiP~------~irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~gI 201 (421)
T KOG2779|consen 145 KKLVAFISAIPA------TIRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNLEGI 201 (421)
T ss_pred CceEEEEecccc------EEEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhhhhh
Confidence 678888775321 111223445579999999999999999999999999988866554
No 96
>PRK14852 hypothetical protein; Provisional
Probab=96.28 E-value=0.038 Score=51.03 Aligned_cols=73 Identities=14% Similarity=0.049 Sum_probs=60.6
Q ss_pred CCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHh-CCCEEEecCCCCCC
Q 026808 134 LRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKG-QGFKCVKVPEGANW 209 (233)
Q Consensus 134 ~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k-~Gf~~~~~~~~~~~ 209 (233)
+..++.+.+++..++++|+.|..-+--.|++.+..++...+++.+.+.|++.+ ..||++ +||+.+++...+..
T Consensus 114 lr~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~~~~dd~~i~VnPkH---~~FY~r~l~f~~ig~~r~~p~ 187 (989)
T PRK14852 114 LRAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMMSEVDDILVTVNPKH---VKFYTDIFLFKPFGEVRHYDT 187 (989)
T ss_pred HHHcCCeEEeeehheechhhcccchhHHHHHHHHHHHHHcCCCeEEEEECcch---HHHHHHHhCCccccccccCCC
Confidence 44567789999999999988887777788888888887779999999998776 999985 59999998766543
No 97
>KOG4601 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.80 E-value=0.023 Score=42.98 Aligned_cols=83 Identities=18% Similarity=0.160 Sum_probs=49.1
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
+.+.|++.+....-+...... ....+...-|..++|+++.|+.|.|.+|+++.++. .+.+.-.+.++.-....+.|
T Consensus 81 s~l~GllKVG~KkLfl~D~~~-~~ye~e~lcILDFyVheS~QR~G~G~~lfdyMl~k---E~vephQ~a~DrPS~kLl~F 156 (264)
T KOG4601|consen 81 SILKGLLKVGYKKLFLTDNEQ-NQYEEEALCILDFYVHESEQRSGNGFKLFDYMLKK---ENVEPHQCAFDRPSAKLLQF 156 (264)
T ss_pred hheeeeehccceeEEEeccHh-hhhccCCceEEEEEeehhhhhcCchHHHHHHHHHh---cCCCchheeccChHHHHHHH
Confidence 678888876543322222211 11122335666999999999999999999998873 24443333344333345666
Q ss_pred HHhC-CCE
Q 026808 193 YKGQ-GFK 199 (233)
Q Consensus 193 y~k~-Gf~ 199 (233)
..|+ |-+
T Consensus 157 m~khYgl~ 164 (264)
T KOG4601|consen 157 MEKHYGLK 164 (264)
T ss_pred HHHhcCcc
Confidence 6554 443
No 98
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=95.65 E-value=0.24 Score=40.59 Aligned_cols=59 Identities=15% Similarity=0.071 Sum_probs=49.3
Q ss_pred EEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecC
Q 026808 146 NVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 146 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
..+..+++++.+.+..|+-.++++|.++|++.+-+.....+.+..+|=++.||+.+...
T Consensus 224 ~~g~~~~~~~~~~~~lL~w~~i~~a~~~G~~~fDfG~s~~~~G~~~FK~~~G~~~~~l~ 282 (330)
T TIGR03019 224 YAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGPFKFKKNWGFEPQPLH 282 (330)
T ss_pred eccChHHHHhhChHHHHHHHHHHHHHHCCCcEEEcCCCCCCCccHHHHhcCCCeeccce
Confidence 44678999999999999999999999999999988765555667777788899987654
No 99
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=95.54 E-value=0.024 Score=49.84 Aligned_cols=32 Identities=22% Similarity=0.321 Sum_probs=28.5
Q ss_pred eEEEEEEEccCcccccHHHHHHHHHHHHHHhc
Q 026808 142 AYISNVAVREKFRRKGIAKRLIAKAEAQARGW 173 (233)
Q Consensus 142 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~ 173 (233)
+.|-+++|+|+|++.|+|++.++-+.++...+
T Consensus 615 aRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG~ 646 (1011)
T KOG2036|consen 615 ARIVRIAVHPEYQKMGYGSRAVQLLTDYFEGK 646 (1011)
T ss_pred ceEEEEEeccchhccCccHHHHHHHHHHHhcc
Confidence 67889999999999999999999988887654
No 100
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=95.03 E-value=0.028 Score=44.57 Aligned_cols=63 Identities=21% Similarity=0.170 Sum_probs=50.8
Q ss_pred cHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcchhHHHHHhhhcC
Q 026808 157 GIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPDVKFKFMMKLLKA 229 (233)
Q Consensus 157 Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~~~~~~m~k~l~~ 229 (233)
|-...|+..+.+.|++.|+..|.+.|...+ ..+|+++||...+..+.++- + .+.++|.|.|..
T Consensus 21 ~~~~~~~~~~~~~a~~~~~~ki~~~~~~~~---~~~~~~~g~~~e~~i~~~f~--g-----~~~~~~~~~~~~ 83 (266)
T TIGR03827 21 NDVEALIPDLDALAKKEGYTKIIAKVPGSD---KPLFEERGYLEEAKIPGYFN--G-----HDAYFMSKYLDE 83 (266)
T ss_pred ccHHHHHHHHHHHHHHcCCcEEEEEccHHH---HHHHHHCCCeEEEecccccC--C-----CceEEEEEcCch
Confidence 447899999999999999999999998554 89999999999999987652 2 234667666643
No 101
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=94.99 E-value=0.014 Score=48.58 Aligned_cols=66 Identities=17% Similarity=0.143 Sum_probs=49.1
Q ss_pred CCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEE--ee---cCChhhHHHHHhCCCEEEecC
Q 026808 139 TGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALH--CD---FNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 139 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~--~~---~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
...+.|..+.|+|+||+-|+|..-+..+.+|..++.++...-. .. ....+=-.|+++.||...-..
T Consensus 239 taaariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~gfkylwdt 309 (593)
T COG2401 239 TAAARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKYLWDT 309 (593)
T ss_pred hhhhheeEEEeccccccCccchhHHHHHHHHHHHhhChhhhhhhhHHHHHHHHHhcCchhhhhceeeeeec
Confidence 3457899999999999999999999999999999877655432 11 111112368999999987643
No 102
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=94.81 E-value=0.65 Score=36.14 Aligned_cols=76 Identities=14% Similarity=0.135 Sum_probs=54.8
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
|++||++.++..++.. ...| .+-+|++-.+++|+-.+-.-+++|++.|.+.++|.-...+- .++
T Consensus 153 g~LiaVav~D~l~d~l-----------SAVY---~FyDPd~~~~SLG~~~iL~qI~~ak~~gl~y~YLGY~I~~c--~kM 216 (240)
T PRK01305 153 GKLVAVAVTDVLDDGL-----------SAVY---TFYDPDEEHRSLGTFAILWQIELAKRLGLPYVYLGYWIKGS--RKM 216 (240)
T ss_pred CeEEEEEEEeccCCce-----------eeEE---EeeCCCccccCCHHHHHHHHHHHHHHcCCCeEeeeEEECCC--Ccc
Confidence 8999999887654332 1133 47899999999999999999999999999999998554332 334
Q ss_pred HHhCCCEEEecC
Q 026808 193 YKGQGFKCVKVP 204 (233)
Q Consensus 193 y~k~Gf~~~~~~ 204 (233)
==|..|++....
T Consensus 217 ~YK~~f~P~E~l 228 (240)
T PRK01305 217 NYKARFRPLEIL 228 (240)
T ss_pred cccccCCcceee
Confidence 344455555543
No 103
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=94.72 E-value=0.14 Score=37.90 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=28.6
Q ss_pred eEEEEEEEccCcccccHHHHHHHHHHHHHHhcC
Q 026808 142 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWG 174 (233)
Q Consensus 142 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g 174 (233)
..+.-+.|.|.||++|+|+.|++..-+.++..+
T Consensus 81 ~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~e~ 113 (188)
T PF01853_consen 81 NNLSCILTLPPYQRKGYGRFLIDFSYELSRREG 113 (188)
T ss_dssp EEESEEEE-GGGTTSSHHHHHHHHHHHHHHHTT
T ss_pred eeEeehhhcchhhhcchhhhhhhhHHHHhhccC
Confidence 566778999999999999999999999998765
No 104
>KOG3698 consensus Hyaluronoglucosaminidase [Posttranslational modification, protein turnover, chaperones]
Probab=94.55 E-value=0.16 Score=43.74 Aligned_cols=60 Identities=15% Similarity=0.164 Sum_probs=52.7
Q ss_pred EEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCC
Q 026808 147 VAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 147 l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~ 206 (233)
.+++.+.---|+.+.++.-++...+.+|.....+.|..+..+-++||.++||..++..+.
T Consensus 822 ~~~~~~a~D~~~~k~m~~vll~tL~aNGsrGaf~~V~~dD~~~~~fys~lG~~d~~~~e~ 881 (891)
T KOG3698|consen 822 TYFGMDASDAHPMKKMIQVLLVTLAANGSRGAFLTVAIDDIERQKFYSELGLTDLGLSEC 881 (891)
T ss_pred hccccccccchHHHHHHHHHHHHHHhcCCcceeEEechhHHHHHHHHHHhchHHHhHhhc
Confidence 456666678899999999999999999999999999999999999999999988876543
No 105
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=94.46 E-value=0.13 Score=34.07 Aligned_cols=45 Identities=16% Similarity=0.217 Sum_probs=35.8
Q ss_pred CeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhh
Q 026808 140 GIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGA 189 (233)
Q Consensus 140 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a 189 (233)
...||+.++|.|+.||.|+|..++..+.+.. +.+.-.+.++|+..
T Consensus 33 ~~~yLdKfaV~~~~~g~gvad~vf~~i~~d~-----~~L~Wrsr~~n~~n 77 (99)
T cd04264 33 GVPYLDKFAVSSSAQGEGTSDALWRRLRRDF-----PKLFWRSRKTNPIN 77 (99)
T ss_pred CceEEEEEEEchhhhhcChHHHHHHHHHhhC-----CceEEEeCCCCccc
Confidence 4589999999999999999999999888752 34555666676643
No 106
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=94.43 E-value=0.26 Score=34.35 Aligned_cols=74 Identities=18% Similarity=0.215 Sum_probs=52.3
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
|++||++.++..++... ..| .+-+|++..+++|+-.+=.-+++|++.|.+.+++.-...+ ..++
T Consensus 48 ~kLiav~v~D~l~~glS-----------aVY---~fyDPd~~~~SlG~~~iL~eI~~a~~~~l~y~YLGY~I~~--c~kM 111 (128)
T PF04377_consen 48 GKLIAVAVVDILPDGLS-----------AVY---TFYDPDYSKRSLGTYSILREIELARELGLPYYYLGYWIHG--CPKM 111 (128)
T ss_pred CeEEEEEEeecccchhh-----------hee---eeeCCCccccCcHHHHHHHHHHHHHHcCCCEEeeCeEeCC--CCcc
Confidence 89999998876443321 133 3669999999999999999999999999999999744322 2333
Q ss_pred HHhCCCEEEe
Q 026808 193 YKGQGFKCVK 202 (233)
Q Consensus 193 y~k~Gf~~~~ 202 (233)
==|..|++..
T Consensus 112 ~YK~~f~P~e 121 (128)
T PF04377_consen 112 NYKARFRPHE 121 (128)
T ss_pred cchhcCCcee
Confidence 3344444443
No 107
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=94.38 E-value=0.5 Score=37.78 Aligned_cols=118 Identities=14% Similarity=0.150 Sum_probs=71.8
Q ss_pred eEEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceecc
Q 026808 24 IVVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGG 103 (233)
Q Consensus 24 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (233)
-.|-.+....++.+..++.+++.+......-+.-..+.+.+.+. .|.+..+.|...+..+.
T Consensus 82 c~idv~N~~ql~dv~~lL~eNYVED~~ag~rf~Y~~EFl~Wal~---~pg~kK~whigvRvk~t---------------- 142 (451)
T COG5092 82 CVIDVANKKQLEDVFVLLEENYVEDIYAGHRFRYSVEFLQWALD---GPGGKKRWHIGVRVKGT---------------- 142 (451)
T ss_pred eeEeccccchhHHHHHHHHhhhhhhhhhhhHHHHHHHHHHHhhc---CCCCceeeEEEEEEccc----------------
Confidence 46777788899999999998886554332222223333444433 34443333333333221
Q ss_pred cCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCC
Q 026808 104 LDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGC 175 (233)
Q Consensus 104 ~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~ 175 (233)
.++||++...+.. . ....+....+.+..++|+.+.|++.+.--|++.+...|...|+
T Consensus 143 ---------~klVaFIsa~p~~--v----~vRgK~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~~~i 199 (451)
T COG5092 143 ---------QKLVAFISAKPHL--V----SVRGKRSSVLEVNFLCIHKELRSKRLTPVLIKEITRRANVDGI 199 (451)
T ss_pred ---------ceeEEEEecceeE--E----EEcccccccceEEEEEEehhhhhCccchHHHHHHHHhhhhhhh
Confidence 4677776643210 0 1111223358899999999999999999999999988865543
No 108
>PHA00432 internal virion protein A
Probab=94.30 E-value=0.57 Score=32.86 Aligned_cols=30 Identities=13% Similarity=-0.054 Sum_probs=27.1
Q ss_pred CCCeEEEEeecCChhhHHHHHhCCCEEEec
Q 026808 174 GCRSIALHCDFNNLGATKLYKGQGFKCVKV 203 (233)
Q Consensus 174 g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~ 203 (233)
.++.++=.|...|..+++|.+.+||+....
T Consensus 92 ~yp~LwNyV~~~N~~hir~Lk~lGf~f~~e 121 (137)
T PHA00432 92 QYPSLWNYVWVGNKSHIRFLKSIGAVFHNE 121 (137)
T ss_pred hhhhhheeeecCCHHHHHHHHHcCeeeecc
Confidence 477888899999999999999999998775
No 109
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=93.89 E-value=0.18 Score=33.38 Aligned_cols=45 Identities=16% Similarity=0.222 Sum_probs=35.2
Q ss_pred CeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhh
Q 026808 140 GIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGA 189 (233)
Q Consensus 140 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a 189 (233)
...||+.++|.|+.||.|+|..++..+.+.. +.+.-.+.++|+..
T Consensus 33 ~~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~-----~~L~Wrsr~~n~~n 77 (99)
T cd04265 33 GVPYLDKFAVSSSAQGEGTGEALWRRLRRDF-----PKLFWRSRSTNPIN 77 (99)
T ss_pred CceEEEEEEEchhhhhcChHHHHHHHHHhhC-----CceEEEeCCCCccc
Confidence 3489999999999999999999999888753 34555666666543
No 110
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=93.67 E-value=0.22 Score=33.15 Aligned_cols=27 Identities=26% Similarity=0.346 Sum_probs=23.1
Q ss_pred CCCCeeEEEEEEEccCcccccHHHHHH
Q 026808 137 RRTGIAYISNVAVREKFRRKGIAKRLI 163 (233)
Q Consensus 137 ~~~~~~~i~~l~V~p~~rg~Gig~~Ll 163 (233)
...+.++|..++|+|+||+......|.
T Consensus 74 ~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 74 LPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred cCCcEEEeehheECHhHCCChHHHHHh
Confidence 335889999999999999998887775
No 111
>PHA01733 hypothetical protein
Probab=93.05 E-value=0.7 Score=33.00 Aligned_cols=46 Identities=22% Similarity=0.139 Sum_probs=33.7
Q ss_pred HHHHHHHHHHH-hcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCC
Q 026808 161 RLIAKAEAQAR-GWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 161 ~Ll~~~~~~a~-~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~ 206 (233)
.+++....+.. ...++.++=.|+..|..+++|.+.+||+.....+.
T Consensus 89 ~f~re~r~~l~e~~~Yp~LwNyV~~~N~~hir~Lk~lGF~f~~~~~~ 135 (153)
T PHA01733 89 ALLRGAKWWLPKSRNYDLLWNIVDKRNLVHRKLLRKLGFKGLRYVQP 135 (153)
T ss_pred HHHHHHHHHHHHhccccHHHHhHhcccHHHHHHHHHcCceeeccccc
Confidence 33333333333 34778888889999999999999999998776543
No 112
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=92.18 E-value=0.42 Score=37.82 Aligned_cols=33 Identities=24% Similarity=0.274 Sum_probs=28.8
Q ss_pred eEEEEEEEccCcccccHHHHHHHHHHHHHHhcC
Q 026808 142 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWG 174 (233)
Q Consensus 142 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g 174 (233)
..+.-+.|.|-||++|+|+.|++..-+..+..|
T Consensus 156 nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~Eg 188 (290)
T PLN03238 156 YNLACILTLPPYQRKGYGKFLISFAYELSKREG 188 (290)
T ss_pred CcEEEEEecChhhhccHhHhHHHHHhHHhhccC
Confidence 456678999999999999999999999887765
No 113
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=91.64 E-value=0.9 Score=33.38 Aligned_cols=55 Identities=16% Similarity=0.246 Sum_probs=38.7
Q ss_pred CeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHH-HhC-CCEE
Q 026808 140 GIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLY-KGQ-GFKC 200 (233)
Q Consensus 140 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y-~k~-Gf~~ 200 (233)
...|++.++|.|.-||.|++..+...+.+.. +.+.-.+.++|+. .++| ++. |+-.
T Consensus 87 ~v~yLdKFav~~~~~g~gv~D~vf~~i~~d~-----p~L~Wrsr~~n~~-~~Wyf~rs~G~~~ 143 (170)
T PF04768_consen 87 PVPYLDKFAVSKSAQGSGVADNVFNAIRKDF-----PKLFWRSREDNPN-NKWYFERSDGSFK 143 (170)
T ss_dssp SEEEEEEEEE-HHHHHTTHHHHHHHHHHHH------SSEEEEEETT-TT-HHHHHHH-SEEEE
T ss_pred CCeEEEEEEecchhhhcCHHHHHHHHHHHhc-----cceEEEecCCCCc-ccEEEEeeEEEEE
Confidence 4699999999999999999999999986633 3455566667654 4555 444 6655
No 114
>PLN03239 histone acetyltransferase; Provisional
Probab=91.24 E-value=0.66 Score=37.81 Aligned_cols=33 Identities=18% Similarity=0.133 Sum_probs=28.8
Q ss_pred eEEEEEEEccCcccccHHHHHHHHHHHHHHhcC
Q 026808 142 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWG 174 (233)
Q Consensus 142 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g 174 (233)
..+.-+.|.|-||++|+|+.|++..-+..+..|
T Consensus 214 ~NLaCIltLPpyQrkGyG~lLI~fSYeLSr~Eg 246 (351)
T PLN03239 214 YNLACILTFPAHQRKGYGRFLIAFSYELSKKEE 246 (351)
T ss_pred CceEEEEecChhhhcchhhhhHhhhhHhhhhcC
Confidence 356678999999999999999999999887764
No 115
>PTZ00064 histone acetyltransferase; Provisional
Probab=90.40 E-value=0.72 Score=39.36 Aligned_cols=33 Identities=18% Similarity=0.184 Sum_probs=29.0
Q ss_pred eEEEEEEEccCcccccHHHHHHHHHHHHHHhcC
Q 026808 142 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWG 174 (233)
Q Consensus 142 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g 174 (233)
..+.-+.|.|-||++|+|+.|+++.-+..+..|
T Consensus 385 nNLACILtLPpyQRKGYGklLIdfSYeLSrrEg 417 (552)
T PTZ00064 385 YNLACILTLPCYQRKGYGKLLVDLSYKLSLKEG 417 (552)
T ss_pred CceEEEEecchhhhcchhhhhhhhhhhhhhhcC
Confidence 456678999999999999999999999987765
No 116
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=90.27 E-value=0.7 Score=33.62 Aligned_cols=53 Identities=11% Similarity=-0.002 Sum_probs=44.2
Q ss_pred eeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCC
Q 026808 141 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQG 197 (233)
Q Consensus 141 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~G 197 (233)
.+++..++|+|+.+|.||+..+ +.+.....+.|++.....|. ++..+.+++++
T Consensus 85 VaElGLygVRpDLEGlGi~hs~-r~m~PvLq~LgVPF~FGtVR---~al~~Hv~R~~ 137 (196)
T PF02474_consen 85 VAELGLYGVRPDLEGLGISHSM-RVMYPVLQELGVPFGFGTVR---HALRNHVERLC 137 (196)
T ss_pred EEEEEEEEeeccccccccchhh-hhhhhHHHhcCCCeecccch---HHHHHHHHHHh
Confidence 3788899999999999999976 67778888889998888887 66777777765
No 117
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=89.23 E-value=7.6 Score=29.05 Aligned_cols=135 Identities=11% Similarity=0.065 Sum_probs=72.7
Q ss_pred EEEeCCcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecCceeccc
Q 026808 25 VVREARIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSEDFKVGGL 104 (233)
Q Consensus 25 ~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (233)
-+|+++++|++++.+|+++....---.+ ....+.+...+- | ...--..+|.+++
T Consensus 30 glR~m~~~Dv~~v~~Ll~~yl~~f~l~~---~fs~eev~Hw~l----p-------------~~~Vv~syVve~~------ 83 (190)
T PF02799_consen 30 GLRPMEEKDVPQVTKLLNKYLKKFDLAP---VFSEEEVKHWFL----P-------------RKNVVYSYVVEDP------ 83 (190)
T ss_dssp TEEE--GGGHHHHHHHHHHHHTTSSEEE---E--HHHHHHHHS------------------BTTTEEEEEEEET------
T ss_pred ccccCchhhHHHHHHHHHHHHHhccccc---ccCHHHHHhhcc----c-------------CCCeEEEEEEecC------
Confidence 3899999999999999996654211112 122222322221 0 0111233444444
Q ss_pred CCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 105 DGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 105 ~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
+|+|-.++.+...+...-... .-..-+.+|+ ...+...- =-++|+..++-.|++.|++.+-..-.-
T Consensus 84 -------~~~ITDf~SFY~Lpstvi~~~--k~~~l~aAY~-fY~~~~~~----~l~~Lm~DaLi~Ak~~gfDVFNaLd~m 149 (190)
T PF02799_consen 84 -------DGKITDFFSFYSLPSTVIGNP--KHKTLKAAYS-FYYVATST----RLKELMNDALILAKNEGFDVFNALDLM 149 (190)
T ss_dssp -------TSEEEEEEEEEEEEEEESSSS--SSSEEEEEEE-EEEEESSS----HHHHHHHHHHHHHHHTTESEEEEESTT
T ss_pred -------CCceeeEEEEeecceeecCCC--Cccceeeeee-eeeeecCC----CHHHHHHHHHHHHHHcCCCEEehhhhc
Confidence 157777776644322111100 0011234555 34444332 256889999999999999988777666
Q ss_pred CChhhHHHHHhCCCEEEe
Q 026808 185 NNLGATKLYKGQGFKCVK 202 (233)
Q Consensus 185 ~n~~a~~~y~k~Gf~~~~ 202 (233)
+| ..|.+.+.|..-.
T Consensus 150 dN---~~fL~~lKFg~Gd 164 (190)
T PF02799_consen 150 DN---SSFLEDLKFGPGD 164 (190)
T ss_dssp TG---GGTTTTTT-EEEE
T ss_pred cc---hhhHhhCCccCCC
Confidence 66 5789999998643
No 118
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=89.17 E-value=0.78 Score=37.54 Aligned_cols=51 Identities=18% Similarity=0.228 Sum_probs=35.4
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHh
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARG 172 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~ 172 (233)
-..+|+..+.......+.. -..|..+.+.|.||++|+|+.|++.+......
T Consensus 198 y~~~gy~tiyk~y~yid~~---------R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~ 248 (403)
T KOG2696|consen 198 YAYVGYYTIYKFYEYIDRI---------RPRISQMLILPPFQGKGLGSQLYEAIARDYLE 248 (403)
T ss_pred EeeeeeEEEeehhhhhhhh---------hhhhheeEEeccccCCchHHHHHHHHHHhhcc
Confidence 3456666654433332221 15677899999999999999999999965544
No 119
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=88.53 E-value=0.71 Score=39.09 Aligned_cols=33 Identities=24% Similarity=0.274 Sum_probs=28.4
Q ss_pred eEEEEEEEccCcccccHHHHHHHHHHHHHHhcC
Q 026808 142 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWG 174 (233)
Q Consensus 142 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g 174 (233)
..+.-+.|.|-||++|+|+.|+++.-+..+..|
T Consensus 307 ~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~eg 339 (450)
T PLN00104 307 YNLACILTLPPYQRKGYGKFLIAFSYELSKREG 339 (450)
T ss_pred CceEEEEecchhhhcchhheehhheehhhhccC
Confidence 456678999999999999999999888887654
No 120
>KOG3014 consensus Protein involved in establishing cohesion between sister chromatids during DNA replication [Replication, recombination and repair]
Probab=88.11 E-value=4 Score=31.64 Aligned_cols=33 Identities=36% Similarity=0.337 Sum_probs=28.3
Q ss_pred CCeeEEEEEEEccCcccccHHHHHHHHHHHHHH
Q 026808 139 TGIAYISNVAVREKFRRKGIAKRLIAKAEAQAR 171 (233)
Q Consensus 139 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~ 171 (233)
.-.+-|.+++|.+.-|++||++.|++.+.....
T Consensus 181 ~~~~GIsRIWV~s~~Rr~gIAs~lldva~~~~~ 213 (257)
T KOG3014|consen 181 PAICGISRIWVSSLRRRKGIASLLLDVARCNFV 213 (257)
T ss_pred CcEeeeEEEEeehhhhhhhhHHHHHHHHHHhhh
Confidence 446889999999999999999999998876543
No 121
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=88.02 E-value=5.9 Score=31.81 Aligned_cols=83 Identities=20% Similarity=0.230 Sum_probs=60.1
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhc--C------CCe--EEEEe
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW--G------CRS--IALHC 182 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~--g------~~~--i~l~~ 182 (233)
+.+++.+.+.+..... .+..-...|.++.|++=|..-|+-..|++|++-.+++. . -.. +.+++
T Consensus 178 etPIAiisl~~~~~~S-------t~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~ey~k~k~~~si~ll~d~ 250 (304)
T PF11124_consen 178 ETPIAIISLVPNKDQS-------TKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKEYLKGKKGCSIKLLVDV 250 (304)
T ss_pred CCceEEEEeccccccC-------CCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHHhccccccceEEEEEEe
Confidence 5788888876533211 11222578899999999999999999999997776652 1 113 34455
Q ss_pred ecCChhhHHHHHhCCCEEEe
Q 026808 183 DFNNLGATKLYKGQGFKCVK 202 (233)
Q Consensus 183 ~~~n~~a~~~y~k~Gf~~~~ 202 (233)
-+......+..+++||+.+.
T Consensus 251 YSFD~~~~k~L~~~gF~~i~ 270 (304)
T PF11124_consen 251 YSFDKDMKKTLKKKGFKKIS 270 (304)
T ss_pred eeccHHHHHHHHHCCCeeee
Confidence 66678889999999999998
No 122
>PF11039 DUF2824: Protein of unknown function (DUF2824); InterPro: IPR022568 This family of proteins has no known function. Members of the family are found in P22-like viruses and bacteria. Some of the phage members have been annotated as head assembly proteins, but this has not been confirmed.
Probab=84.25 E-value=12 Score=26.14 Aligned_cols=80 Identities=11% Similarity=-0.009 Sum_probs=55.4
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhc-CCCeEEEEeecCChhhHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGW-GCRSIALHCDFNNLGATK 191 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~-g~~~i~l~~~~~n~~a~~ 191 (233)
+.++|+..+....+. ....+ -.-+|++|| ++.+.-.....|..+. .+..+...+...-+-.+-
T Consensus 47 ~~l~Gi~~v~~i~~~-------------~vecH-a~y~P~fRG--~a~~~~~~F~kwlL~Ns~f~~vit~vp~kt~~Grv 110 (151)
T PF11039_consen 47 GQLGGIVYVEEIQPS-------------VVECH-AMYDPGFRG--YALEIGRLFCKWLLENSPFQNVITFVPDKTRYGRV 110 (151)
T ss_pred eEEEEEEEEEEEeee-------------eEEEE-eeeccccch--hHHHHHHHHHHHHhcCCceeEEEEecccccccchh
Confidence 788888887653221 24543 356899999 7777777777777766 665555556555566677
Q ss_pred HHHhCCCEEEecCCCCC
Q 026808 192 LYKGQGFKCVKVPEGAN 208 (233)
Q Consensus 192 ~y~k~Gf~~~~~~~~~~ 208 (233)
+-+=.|.+.++..+++.
T Consensus 111 ic~llg~~RVG~id~~~ 127 (151)
T PF11039_consen 111 ICRLLGARRVGHIDDYF 127 (151)
T ss_pred HhhhhCCceeeeHHHHh
Confidence 77778999999988754
No 123
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=82.21 E-value=6.7 Score=30.48 Aligned_cols=59 Identities=17% Similarity=0.190 Sum_probs=47.1
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecC
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFN 185 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~ 185 (233)
|++++++..+..++.. ...| .+-+|++...++|+-.+-.-+.+|.+.|.+.++|.-...
T Consensus 160 G~LvAVavtDvL~dGl-----------SsVY---~FydPd~s~~SLGt~~iL~~I~~aq~~~l~yvYLGYwI~ 218 (253)
T COG2935 160 GKLVAVAVTDVLPDGL-----------SSVY---TFYDPDMSKRSLGTLSILDQIAIAQRLGLPYVYLGYWIK 218 (253)
T ss_pred CcEEEEEeeecccCcc-----------eeEE---EEeCCChhhhcchHHHHHHHHHHHHHhCCCeEEEEEEEC
Confidence 8999988877654332 1133 477999999999999999999999999999999986543
No 124
>KOG2747 consensus Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=81.48 E-value=2.4 Score=35.34 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=27.5
Q ss_pred eEEEEEEEccCcccccHHHHHHHHHHHHHHhcC
Q 026808 142 AYISNVAVREKFRRKGIAKRLIAKAEAQARGWG 174 (233)
Q Consensus 142 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g 174 (233)
..+.-+.|.|-||++|+|+.|+++.-+.-+..|
T Consensus 261 yNlaCILtLPpyQRkGYGklLIdFSYeLSr~E~ 293 (396)
T KOG2747|consen 261 YNLACILTLPPYQRKGYGKLLIDFSYELSRREG 293 (396)
T ss_pred cceeeeeecChhhhcccchhhhhhhhhhhcccC
Confidence 456678999999999999999999888776543
No 125
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=81.28 E-value=27 Score=28.12 Aligned_cols=58 Identities=14% Similarity=0.066 Sum_probs=36.5
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEee
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCD 183 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~ 183 (233)
|+++|++...+.. ..+.+.++..--+|+ --+|+-..|+..+++.+++.|++.+.|...
T Consensus 190 gki~af~~~~~~~------------~~~~~~~~~~k~~~~-a~~G~~e~l~~~~~~~~~~~g~~~lnLg~a 247 (299)
T PF09924_consen 190 GKIVAFAIGSPLG------------GRDGWSIDFEKADPD-APKGIYEFLNVEFAEHLKAEGVEYLNLGFA 247 (299)
T ss_dssp TEEEEEEEEEEEE-------------TTEEEEEEEEE-TT--STTHHHHHHHHHHHHS--TT--EEE----
T ss_pred CcEEEEEEEEEcc------------CCccEEEEEEecCCC-CCCcHHHHHHHHHHHhhhhCCceEEEcccc
Confidence 8999999886532 123366655555666 568999999999999999889999886543
No 126
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=80.15 E-value=18 Score=30.22 Aligned_cols=136 Identities=12% Similarity=0.019 Sum_probs=76.8
Q ss_pred eEEEeC-----CcccHHHHHhhhhhccCCCCCChHHHHHHHHHHHHHHhcccccCCccceeeeeeecCCCccceeeeecC
Q 026808 24 IVVREA-----RIEDIWEVAETHCSCFFPNYTFPLDLMLRVDRLVAMLSGFTVQHGTRRTCLVAVVGSRMDETFFLGSED 98 (233)
Q Consensus 24 i~iR~~-----~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (233)
+.++.. ++++++.+..++...+...|..+.-.. +.+..+.+.+ .+.-.++++..+
T Consensus 200 i~~~~l~G~~i~~~~~~~f~~~Y~~Ty~k~~~~~yLt~---~FF~~l~~~m-----------------~~~~~l~~A~~~ 259 (370)
T PF04339_consen 200 IRIRTLTGDEITDEDWDRFYRLYQNTYAKRWGRPYLTR---EFFEQLAETM-----------------PEQVVLVVARRD 259 (370)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHHHHhhCCChhhcH---HHHHHHHHhC-----------------cCCEEEEEEEEC
Confidence 556554 456678888888888776666543222 2222222211 122345555556
Q ss_pred ceecccCCcccccCCeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeE
Q 026808 99 FKVGGLDGKFSLHRGYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSI 178 (233)
Q Consensus 99 ~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i 178 (233)
+++||++.+-... +++|-.-.+...++.+.-.- ...-+.+++|.++|++.+
T Consensus 260 --------------g~~Va~aL~l~~~--------------~~LyGRYwG~~~~~~~LHFe-~cYYq~Ie~aI~~Gl~~f 310 (370)
T PF04339_consen 260 --------------GQPVAFALCLRGD--------------DTLYGRYWGCDEEIPFLHFE-LCYYQGIEYAIEHGLRRF 310 (370)
T ss_pred --------------CeEEEEEEEEEeC--------------CEEEEeeecccccccCcchH-HHHHHHHHHHHHcCCCEE
Confidence 7888887764322 22443334445555544422 224568999999999988
Q ss_pred EEEeecCChhhHHHHHhCCCEEEecCCCCCCCCCCC
Q 026808 179 ALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKN 214 (233)
Q Consensus 179 ~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~ 214 (233)
...+..+++ ...||.++.+.....+.++.+
T Consensus 311 ~~GaqGEHK------~~RGf~P~~t~S~H~~~~~~~ 340 (370)
T PF04339_consen 311 EPGAQGEHK------IARGFEPVPTYSAHWIADPRF 340 (370)
T ss_pred ECCcchhHH------HHcCCccccceeeeeeCChhH
Confidence 666543322 245999988765544444443
No 127
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=80.12 E-value=5.2 Score=29.67 Aligned_cols=59 Identities=19% Similarity=0.222 Sum_probs=48.6
Q ss_pred CCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEec
Q 026808 138 RTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKV 203 (233)
Q Consensus 138 ~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~ 203 (233)
.....+|..++.. +.|.+..|+..+.......|++.+..+.. ....+++.++|......
T Consensus 84 R~~IvEvGnLAs~----~~g~~~~l~~~l~~~L~~~g~~w~vfTaT---~~lr~~~~rlgl~~~~L 142 (179)
T PF12261_consen 84 RSQIVEVGNLASF----SPGAARLLFAALAQLLAQQGFEWVVFTAT---RQLRNLFRRLGLPPTVL 142 (179)
T ss_pred hhheeEeechhhc----CcccHHHHHHHHHHHHHHCCCCEEEEeCC---HHHHHHHHHcCCCceec
Confidence 3456788777765 48999999999999999999998877655 77899999999988754
No 128
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=78.47 E-value=21 Score=25.32 Aligned_cols=76 Identities=14% Similarity=0.189 Sum_probs=46.4
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHH
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKL 192 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~ 192 (233)
+.+.|++..... |+ ....+..+..+.+.| -+......-||+.+.+-|-..++..+.+.+++ ....-
T Consensus 65 ~~~~GfvLAQaV---WQ-------GdrptVlV~ri~~~~-~~~~~~~~GLLrAvvKSAYDa~VYEv~l~l~p---~l~~A 130 (161)
T PF09390_consen 65 GELQGFVLAQAV---WQ-------GDRPTVLVRRILLAP-GEPEEVYEGLLRAVVKSAYDAGVYEVHLHLDP---ELEAA 130 (161)
T ss_dssp TEEEEEEEEEEE---E--------SSSEEEEEEEE---E-ESSHHHHHHHHHHHHHHHHHTT-SEEEE---T---HHHHH
T ss_pred CceeeeeehhHH---hc-------CCCceEEEEEeecCC-CCcHHHHHHHHHHHHHhhhccceEEEEeeCCH---HHHHH
Confidence 789999876542 11 111236665655554 35568888999999999999999999998884 55666
Q ss_pred HHhCCCEEEe
Q 026808 193 YKGQGFKCVK 202 (233)
Q Consensus 193 y~k~Gf~~~~ 202 (233)
.+..||...+
T Consensus 131 ~~a~~~~~~~ 140 (161)
T PF09390_consen 131 ARAEGFRLGG 140 (161)
T ss_dssp HHHTT----S
T ss_pred HhhcccccCC
Confidence 7788888655
No 129
>PRK00756 acyltransferase NodA; Provisional
Probab=76.06 E-value=7.3 Score=28.32 Aligned_cols=51 Identities=14% Similarity=0.063 Sum_probs=39.1
Q ss_pred eeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHh
Q 026808 141 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKG 195 (233)
Q Consensus 141 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k 195 (233)
.+++...+|+|+..|.||+..+ +.+.....+.|++...-.|. ++..+-.++
T Consensus 85 VaElGLygVRpDLEGlGi~~S~-r~m~PvLq~LgVPF~FGtVR---~al~~Hv~R 135 (196)
T PRK00756 85 VAELGLYGVRPDLEGLGIAHSI-RAMYPVLQELGVPFAFGTVR---HALRNHVER 135 (196)
T ss_pred EEEeeeeeeccccccccchhhH-HHHHHHHHhcCCCeecccch---HHHHHHHHH
Confidence 3788889999999999998876 67777777889988777776 444544444
No 130
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=75.74 E-value=14 Score=24.96 Aligned_cols=46 Identities=26% Similarity=0.278 Sum_probs=35.6
Q ss_pred CCeeEEEEEEEccCccc-ccHHHHHHHHHHHHHHhcCCCe-EEEEeecCChhh
Q 026808 139 TGIAYISNVAVREKFRR-KGIAKRLIAKAEAQARGWGCRS-IALHCDFNNLGA 189 (233)
Q Consensus 139 ~~~~~i~~l~V~p~~rg-~Gig~~Ll~~~~~~a~~~g~~~-i~l~~~~~n~~a 189 (233)
....|++.++|.++-|| .|++..++..+.+ ..+. +.-.+.++|+..
T Consensus 37 ~~v~yLdKFav~~~~~gl~gv~D~vf~~m~~-----~fp~~L~Wrsr~~n~~n 84 (108)
T cd04266 37 EKIAYLDKFAVLPKAQGSDGIADILFNAMLD-----GFPNELIWRSRKDNPVN 84 (108)
T ss_pred CCceEEEEEEEccccccccchHHHHHHHHHH-----cCCCceEEEeCCCCccc
Confidence 34589999999999997 8999999998877 3333 555666777654
No 131
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=72.43 E-value=39 Score=27.95 Aligned_cols=41 Identities=17% Similarity=0.060 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEe
Q 026808 159 AKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVK 202 (233)
Q Consensus 159 g~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~ 202 (233)
-.+|+..++-.++..|++.......-+| ..|+.+++|-+-.
T Consensus 356 ~~~lvnDalilak~~gfDVFNAld~meN---~~fl~~LkFg~Gd 396 (421)
T KOG2779|consen 356 LLQLVNDALILAKQKGFDVFNALDLMEN---ESFLKDLKFGPGD 396 (421)
T ss_pred HHHHHHHHHHHHHhcCCceeehhhhhhh---hhHHHhcCcCcCC
Confidence 4578888888898889998877655566 6799999997643
No 132
>PHA02769 hypothetical protein; Provisional
Probab=69.24 E-value=5.1 Score=27.03 Aligned_cols=44 Identities=23% Similarity=0.190 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHH---hcCCCeEEEEeecCChhhHHHHHhCCCEEEecC
Q 026808 159 AKRLIAKAEAQAR---GWGCRSIALHCDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 159 g~~Ll~~~~~~a~---~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
|.-|+.++...+. +.|++.++..-.+++ +-++|.|.||+.++..
T Consensus 94 gd~lvnfl~~l~~k~~~dg~evlwtlgfpdh--snaly~kagfk~vg~t 140 (154)
T PHA02769 94 GDHLVNFLNDLAEKLKKDGFEVLWTLGFPDH--SNALYKKAGFKLVGQT 140 (154)
T ss_pred hHHHHHHHHHHHHHHhcCCeEEEEEecCCCc--chhHHhhhhhhHhccc
Confidence 6667666665554 447776666544443 4679999999999865
No 133
>PF12953 DUF3842: Domain of unknown function (DUF3842); InterPro: IPR024208 This family of proteins has no known function.
Probab=68.97 E-value=8.3 Score=26.79 Aligned_cols=51 Identities=20% Similarity=0.093 Sum_probs=39.9
Q ss_pred cccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCCC
Q 026808 153 FRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGA 207 (233)
Q Consensus 153 ~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~ 207 (233)
=||-|||+++++.+.+...+ .+.+....+|..|-.-..|.|-..--.-++.
T Consensus 7 GQGGGiG~~iv~~lr~~~~~----~~eI~AlGTNa~AT~~MlKaGA~~gATGENa 57 (131)
T PF12953_consen 7 GQGGGIGKQIVEKLRKELPE----EVEIIALGTNAIATSAMLKAGANEGATGENA 57 (131)
T ss_pred CCCChhHHHHHHHHHHhCCC----CcEEEEEehhHHHHHHHHHcCCCCcccccch
Confidence 48999999999988776543 4777788889999999999998765554443
No 134
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=65.76 E-value=20 Score=23.00 Aligned_cols=28 Identities=11% Similarity=-0.033 Sum_probs=24.5
Q ss_pred CCeEEEEeecCChhhHHHHHhCCCEEEe
Q 026808 175 CRSIALHCDFNNLGATKLYKGQGFKCVK 202 (233)
Q Consensus 175 ~~~i~l~~~~~n~~a~~~y~k~Gf~~~~ 202 (233)
++.++=.|...|...++|.+.+|++...
T Consensus 56 Y~~l~N~V~~~N~~HIRfLk~lGA~f~~ 83 (86)
T PF11090_consen 56 YPVLWNFVWVGNKSHIRFLKSLGAVFHN 83 (86)
T ss_pred hhheeEEEEeCCHHHHHHHHhcCcEEcc
Confidence 6678888999999999999999998543
No 135
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=62.75 E-value=39 Score=22.36 Aligned_cols=45 Identities=13% Similarity=0.245 Sum_probs=35.2
Q ss_pred CeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhh
Q 026808 140 GIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGA 189 (233)
Q Consensus 140 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a 189 (233)
...+++.+.|.++-++.|++..++..+.+. .+.+.-.+.++|+..
T Consensus 32 ~v~~LdkFav~~~~~~~gv~D~vf~~i~~d-----~~~L~Wrsr~~n~~n 76 (98)
T cd03173 32 SIPYLDKFAVSDHLWLNNVTDNIFNLIRKD-----FPSLLWRVRENDANL 76 (98)
T ss_pred CCEEEEEEEEcccccccCHHHHHHHHHHhh-----CCeeEEEeCCCCCcc
Confidence 348999999999999999999999988774 335555666666543
No 136
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=61.76 E-value=4.4 Score=33.08 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=23.6
Q ss_pred eEEEEEEEccCcccccHHHHHHHHHHHHHH
Q 026808 142 AYISNVAVREKFRRKGIAKRLIAKAEAQAR 171 (233)
Q Consensus 142 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~ 171 (233)
..+.-+-+.|-||++|+|+.|+++.-...+
T Consensus 263 yNLaCILtLP~yQRrGYG~lLIdFSY~Ls~ 292 (395)
T COG5027 263 YNLACILTLPPYQRRGYGKLLIDFSYLLSQ 292 (395)
T ss_pred CceEEEEecChhHhcccceEeeeeeeeccc
Confidence 456678999999999999999876554443
No 137
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=61.53 E-value=18 Score=30.09 Aligned_cols=33 Identities=15% Similarity=0.345 Sum_probs=28.0
Q ss_pred CCCeeEEEEEEEccCccc-ccHHHHHHHHHHHHH
Q 026808 138 RTGIAYISNVAVREKFRR-KGIAKRLIAKAEAQA 170 (233)
Q Consensus 138 ~~~~~~i~~l~V~p~~rg-~Gig~~Ll~~~~~~a 170 (233)
..+..|++.++|.++.|| .||+..++.-..+..
T Consensus 397 ~~~vpYLDKfAVl~~aQGs~gisd~vfniM~e~f 430 (495)
T COG5630 397 ENNVPYLDKFAVLDDAQGSEGISDAVFNIMREEF 430 (495)
T ss_pred CCCCcceeeeeccccccccchHHHHHHHHHHHhC
Confidence 346689999999999999 999999988776654
No 138
>PRK04531 acetylglutamate kinase; Provisional
Probab=60.45 E-value=68 Score=27.23 Aligned_cols=55 Identities=16% Similarity=0.211 Sum_probs=39.6
Q ss_pred eeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhC-CCEE
Q 026808 141 IAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQ-GFKC 200 (233)
Q Consensus 141 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~-Gf~~ 200 (233)
..|++.++|.++-||.|++..++..+.+.. +.+.-.+.++|+...=+|++. |+-.
T Consensus 310 ~~~Ldkf~v~~~~~~~~v~d~vf~~~~~~~-----~~L~Wrsr~~n~~~~Wyf~~s~G~~~ 365 (398)
T PRK04531 310 GPYLDKFAVLDDARGEGLGRAVWNVMREET-----PQLFWRSRHNNTINKFYYAESDGCIK 365 (398)
T ss_pred ceEeEEEEEccchhhcChHHHHHHHHHhhC-----CceEEEcCCCCCccceeeecccceEe
Confidence 389999999999999999999999888754 345556666776543333443 5544
No 139
>PF04816 DUF633: Family of unknown function (DUF633) ; InterPro: IPR006901 This is a family of uncharacterised bacterial proteins.; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity; PDB: 3LEC_A 3KU1_G 3KR9_A 3GNL_B.
Probab=60.07 E-value=16 Score=27.82 Aligned_cols=49 Identities=12% Similarity=0.200 Sum_probs=36.0
Q ss_pred ccHHHHHHHHHHHHHHhc--CCCeEEEEeecCChhhHHHHHhCCCEEEecC
Q 026808 156 KGIAKRLIAKAEAQARGW--GCRSIALHCDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 156 ~Gig~~Ll~~~~~~a~~~--g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
-|+|..|+..+++..... ....+.|........-+++..++||..+.+.
T Consensus 73 AGMGG~lI~~ILe~~~~~~~~~~~lILqP~~~~~~LR~~L~~~gf~I~~E~ 123 (205)
T PF04816_consen 73 AGMGGELIIEILEAGPEKLSSAKRLILQPNTHAYELRRWLYENGFEIIDED 123 (205)
T ss_dssp EEE-HHHHHHHHHHTGGGGTT--EEEEEESS-HHHHHHHHHHTTEEEEEEE
T ss_pred ecCCHHHHHHHHHhhHHHhccCCeEEEeCCCChHHHHHHHHHCCCEEEEeE
Confidence 578899999999887654 5667777777666677888999999998764
No 140
>COG0807 RibA GTP cyclohydrolase II [Coenzyme metabolism]
Probab=55.90 E-value=52 Score=24.78 Aligned_cols=53 Identities=19% Similarity=0.219 Sum_probs=39.8
Q ss_pred EEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCCC
Q 026808 146 NVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGA 207 (233)
Q Consensus 146 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~ 207 (233)
.+.--+++|.-|+|.++|+. .|++.+.|.++ |+.-+.-.+..|-+++.+.+..
T Consensus 119 ~lg~~~D~R~ygigAqIL~d-------LGI~~irLLtn--np~K~~~l~~~Gi~vverv~~~ 171 (193)
T COG0807 119 ALGFPADERDYGIGAQILKD-------LGIKKIRLLTN--NPRKIYGLEGFGINVVERVPLI 171 (193)
T ss_pred hhcCCchHHHHHHHHHHHHH-------cCCcEEEEecC--ChHHHHHHHhCCceEEEEeecC
Confidence 34556788888888887754 49999988664 7777777888898888876543
No 141
>KOG4387 consensus Ornithine decarboxylase antizyme [Amino acid transport and metabolism]
Probab=55.33 E-value=29 Score=25.59 Aligned_cols=79 Identities=15% Similarity=0.028 Sum_probs=51.5
Q ss_pred EEEEccCcccccHHHHHHHHHHHHHHhc-CCCeEEEEeecCChhhHHH---HHhCCCEEEecCCCCCCCCCCCCcchhHH
Q 026808 146 NVAVREKFRRKGIAKRLIAKAEAQARGW-GCRSIALHCDFNNLGATKL---YKGQGFKCVKVPEGANWPQPKNSPDVKFK 221 (233)
Q Consensus 146 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~-g~~~i~l~~~~~n~~a~~~---y~k~Gf~~~~~~~~~~~~~~~~~~~~~~~ 221 (233)
.+..-|+-.=-+..++=+-.++++|.++ .++++.+....++..--.| +.=.||+++.-.... ......++
T Consensus 104 l~~~IPdq~l~~gsKe~lvalLEfAEekl~~d~Vfi~F~K~R~dr~~LlrtfsyvGFEpvrp~HP~------~pp~~~~f 177 (191)
T KOG4387|consen 104 LFFEIPDQALDVGSKEGLVALLEFAEEKLHVDKVFICFDKNREDRAALLRTFSYVGFEPVRPDHPV------VPPRPDVF 177 (191)
T ss_pred EEEecCcchhcccchHhHHHHHHHHHHhhccceEEEEEecCccChHhhhhhehcceeeecCCCCCC------CCCccceE
Confidence 3455566666777788888888998887 9999999887765543344 444588887744211 22233467
Q ss_pred HHHhhhcCC
Q 026808 222 FMMKLLKAP 230 (233)
Q Consensus 222 ~m~k~l~~~ 230 (233)
.|+.+|...
T Consensus 178 fM~Y~~er~ 186 (191)
T KOG4387|consen 178 FMVYPLERD 186 (191)
T ss_pred EEEEeeccc
Confidence 777777543
No 142
>cd07235 MRD Mitomycin C resistance protein (MRD). Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.
Probab=54.46 E-value=15 Score=24.58 Aligned_cols=25 Identities=12% Similarity=0.256 Sum_probs=17.8
Q ss_pred eEEEEeecCChhhHHHHHhCCCEEEe
Q 026808 177 SIALHCDFNNLGATKLYKGQGFKCVK 202 (233)
Q Consensus 177 ~i~l~~~~~n~~a~~~y~k~Gf~~~~ 202 (233)
.+.+.|.. =.+|++||+++||+...
T Consensus 3 ~i~l~V~D-~~~a~~FY~~LGf~~~~ 27 (122)
T cd07235 3 AVGIVVAD-MAKSLDFYRRLGFDFPE 27 (122)
T ss_pred eEEEEecc-HHHHHHHHHHhCceecC
Confidence 35555543 36889999999998754
No 143
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=53.39 E-value=70 Score=26.85 Aligned_cols=69 Identities=13% Similarity=0.122 Sum_probs=53.5
Q ss_pred EEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCCCCCCCCCCCcc
Q 026808 146 NVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEGANWPQPKNSPD 217 (233)
Q Consensus 146 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~~~~~~~~~~~~ 217 (233)
.+.++|......+...|++.+.+.+.+.|+..+.+.- .++.-....+..||.. .....+.|.+..+.+-
T Consensus 105 R~l~~~~~~~~~~~~~L~~~~~~~a~~~~~Ss~h~lF--~~~~~~~~l~~~G~~~-r~~~qf~W~N~gy~~F 173 (370)
T PF04339_consen 105 RLLIAPGADRAALRAALLQALEQLAEENGLSSWHILF--PDEEDAAALEEAGFLS-RQGVQFHWHNRGYRSF 173 (370)
T ss_pred ceeECCCCCHHHHHHHHHHHHHHHHHHcCCCcceeec--CCHHHHHHHHhCCCce-ecCCceEEecCCCCCH
Confidence 5788888889999999999999999999998876642 2245567788999986 4455567877776653
No 144
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=50.99 E-value=1.1e+02 Score=29.88 Aligned_cols=58 Identities=16% Similarity=0.197 Sum_probs=45.8
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
|+++|++.+.+.. .+.+.++.+--+|+- -.|+...|+..++.++++.|++.+.|...+
T Consensus 430 G~i~af~s~~p~~-------------~~g~slDLMRr~pda-pnGvmE~L~~~l~~~~k~~G~~~~sLg~AP 487 (1094)
T PRK02983 430 GQVVALLSFVPWG-------------RRGLSLDLMRRSPDA-PNGVIELMVAELALEAESLGITRISLNFAV 487 (1094)
T ss_pred CeEEEEEEEeeeC-------------CCCEEEEecccCCCC-CCCHHHHHHHHHHHHHHHcCCCEEEechhh
Confidence 8999999976521 012777777777774 799999999999999999999999987543
No 145
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=49.84 E-value=45 Score=22.63 Aligned_cols=42 Identities=10% Similarity=0.165 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEe
Q 026808 161 RLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVK 202 (233)
Q Consensus 161 ~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~ 202 (233)
.-...+++.+.+.|++.+++.....+..+.++.+++|.+.++
T Consensus 66 ~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~vig 107 (116)
T PF13380_consen 66 DKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIRVIG 107 (116)
T ss_dssp HHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-EEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCEEEe
Confidence 344556666667799999999999999999999999999987
No 146
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=48.85 E-value=36 Score=25.97 Aligned_cols=38 Identities=18% Similarity=0.274 Sum_probs=28.7
Q ss_pred HHHHHhcCCCeEEEE---eecCChhhHHHHHhCCCEEEecC
Q 026808 167 EAQARGWGCRSIALH---CDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 167 ~~~a~~~g~~~i~l~---~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
++-.+..|++++.+. ..+.|.....|++++||+++...
T Consensus 110 v~aL~al~a~ri~vlTPY~~evn~~e~ef~~~~Gfeiv~~~ 150 (238)
T COG3473 110 VEALNALGAQRISVLTPYIDEVNQREIEFLEANGFEIVDFK 150 (238)
T ss_pred HHHHHhhCcceEEEeccchhhhhhHHHHHHHhCCeEEEEee
Confidence 344445577777664 57788999999999999998754
No 147
>PF00925 GTP_cyclohydro2: GTP cyclohydrolase II; InterPro: IPR000926 GTP cyclohydrolase II catalyses the first committed step in the biosynthesis of riboflavin. The enzyme converts GTP and water to formate, 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)- pyrimidine and pyrophosphate, and requires magnesium as a cofactor. It is sometimes found as a bifunctional enzyme with 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP_synthase) IPR000422 from INTERPRO. ; GO: 0003935 GTP cyclohydrolase II activity, 0009231 riboflavin biosynthetic process; PDB: 2BZ0_B 2BZ1_A.
Probab=48.78 E-value=28 Score=25.51 Aligned_cols=45 Identities=24% Similarity=0.392 Sum_probs=25.2
Q ss_pred cCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecC
Q 026808 151 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 151 p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
+++|.-|+|.++|+ ..|+..+.|.+ +|+....-.+.+|-++++..
T Consensus 123 ~d~R~ygigaqIL~-------dLGV~~~rLLt--nnp~k~~~L~g~gleV~~~v 167 (169)
T PF00925_consen 123 EDLRDYGIGAQILR-------DLGVKKMRLLT--NNPRKYVALEGFGLEVVERV 167 (169)
T ss_dssp S----THHHHHHHH-------HTT--SEEEE---S-HHHHHHHHHTT--EEEEE
T ss_pred cccccHHHHHHHHH-------HcCCCEEEECC--CChhHHHHHhcCCCEEEEEe
Confidence 55566666665554 45888887744 46888888999999988764
No 148
>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=44.87 E-value=22 Score=24.64 Aligned_cols=28 Identities=7% Similarity=0.018 Sum_probs=19.8
Q ss_pred CCeEEEEeecCChhhHHHHHhCCCEEEec
Q 026808 175 CRSIALHCDFNNLGATKLYKGQGFKCVKV 203 (233)
Q Consensus 175 ~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~ 203 (233)
+..+.+.|.. =.++.+||+++||+....
T Consensus 4 i~Hi~i~v~D-l~~s~~FY~~LG~~~~~~ 31 (142)
T cd08353 4 MDNVGIVVRD-LEAAIAFFLELGLELEGR 31 (142)
T ss_pred eeeEEEEeCC-HHHHHHHHHHcCCEEccc
Confidence 3455566543 368899999999987654
No 149
>PF07395 Mig-14: Mig-14; InterPro: IPR009977 This family contains a number of bacterial mig-14 proteins (approximately 270 residues long). In Salmonella, mig-14 contributes to resistance to antimicrobial peptides, although the mechanism is not fully understood [].
Probab=43.63 E-value=41 Score=26.68 Aligned_cols=30 Identities=20% Similarity=0.076 Sum_probs=23.0
Q ss_pred EEEEccCcccccHHHHHH----HHHHHHHHhcCC
Q 026808 146 NVAVREKFRRKGIAKRLI----AKAEAQARGWGC 175 (233)
Q Consensus 146 ~l~V~p~~rg~Gig~~Ll----~~~~~~a~~~g~ 175 (233)
.-+++|+++.--.|+-|+ +.+.++|.++|-
T Consensus 205 NgG~Dp~~~~~SpGSiL~w~Ni~~A~~~~~~~~k 238 (264)
T PF07395_consen 205 NGGYDPECRDFSPGSILMWLNIQDAWEYCRAQGK 238 (264)
T ss_pred cCccCcccccCCCccEEEEeeHHHHHHHHHHhCC
Confidence 458899999999999885 666666666554
No 150
>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=42.33 E-value=31 Score=23.17 Aligned_cols=24 Identities=25% Similarity=0.357 Sum_probs=17.0
Q ss_pred EEEEeecCChhhHHHHHhCCCEEEe
Q 026808 178 IALHCDFNNLGATKLYKGQGFKCVK 202 (233)
Q Consensus 178 i~l~~~~~n~~a~~~y~k~Gf~~~~ 202 (233)
+.+.|. +=.++++||+.+||+...
T Consensus 4 v~l~V~-Dl~~s~~FY~~lGf~~~~ 27 (124)
T cd09012 4 INLPVK-DLEKSTAFYTALGFEFNP 27 (124)
T ss_pred EEeecC-CHHHHHHHHHHCCCEEcc
Confidence 334443 236889999999998764
No 151
>COG2384 Predicted SAM-dependent methyltransferase [General function prediction only]
Probab=42.21 E-value=49 Score=25.52 Aligned_cols=49 Identities=10% Similarity=0.210 Sum_probs=38.1
Q ss_pred ccHHHHHHHHHHHHHHhc--CCCeEEEEeecCChhhHHHHHhCCCEEEecC
Q 026808 156 KGIAKRLIAKAEAQARGW--GCRSIALHCDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 156 ~Gig~~Ll~~~~~~a~~~--g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
-|.|-.|+..+++...+. +++++.|-....-..-+.+..+++|+...+.
T Consensus 92 AGMGG~lI~~ILee~~~~l~~~~rlILQPn~~~~~LR~~L~~~~~~I~~E~ 142 (226)
T COG2384 92 AGMGGTLIREILEEGKEKLKGVERLILQPNIHTYELREWLSANSYEIKAET 142 (226)
T ss_pred eCCcHHHHHHHHHHhhhhhcCcceEEECCCCCHHHHHHHHHhCCceeeeee
Confidence 588999999999988776 6777777655444466788899999988754
No 152
>PRK09318 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=41.81 E-value=83 Score=26.61 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=25.5
Q ss_pred HhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCC
Q 026808 171 RGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 171 ~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~ 206 (233)
+..|+..+.|.+ +|+.-+.-.+.+|.+++++.+.
T Consensus 324 ~dLGV~~irLLT--Nnp~K~~~L~~~GieV~~~vpl 357 (387)
T PRK09318 324 KALGIEKVRLLT--NNPRKTKALEKYGIEVVETVPL 357 (387)
T ss_pred HHcCCCEEEECC--CCHHHHHHHHhCCCEEEEEecc
Confidence 345788887744 4777788889999999987643
No 153
>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=40.98 E-value=23 Score=23.55 Aligned_cols=20 Identities=15% Similarity=0.320 Sum_probs=16.5
Q ss_pred hhhHHHHHhCCCEEEecCCC
Q 026808 187 LGATKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 187 ~~a~~~y~k~Gf~~~~~~~~ 206 (233)
.++.+||+.+||+.......
T Consensus 13 ~~s~~FY~~LGf~~~~~~~~ 32 (113)
T cd08356 13 AESKQFYQALGFELEWENDN 32 (113)
T ss_pred HHHHHHHHHhCCeeEecCCC
Confidence 58899999999999876544
No 154
>PTZ00129 40S ribosomal protein S14; Provisional
Probab=38.30 E-value=1.5e+02 Score=21.32 Aligned_cols=51 Identities=12% Similarity=0.135 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEe-----------ecCChhhHHHHHhCCCEEEecCCCCCC
Q 026808 159 AKRLIAKAEAQARGWGCRSIALHC-----------DFNNLGATKLYKGQGFKCVKVPEGANW 209 (233)
Q Consensus 159 g~~Ll~~~~~~a~~~g~~~i~l~~-----------~~~n~~a~~~y~k~Gf~~~~~~~~~~~ 209 (233)
++...+.+.+.+.++|+..+.+.+ -+....|++-..+.|+++....+....
T Consensus 74 Aq~aa~~~a~k~~~~Gi~~v~V~vr~~gg~~~kg~GpGr~~airaL~~~glkI~~I~DvTPi 135 (149)
T PTZ00129 74 AMMAAQDVAARCKELGINALHIKLRATGGVRTKTPGPGAQAALRALARAGLKIGRIEDVTPI 135 (149)
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEEEecCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEecCCC
Confidence 445567778888889999999988 456678899999999998876654433
No 155
>PF08901 DUF1847: Protein of unknown function (DUF1847); InterPro: IPR014997 This group of proteins are functionally uncharacterised. They contain 4 N-terminal cysteines that may form a zinc-binding domain.
Probab=37.42 E-value=39 Score=24.39 Aligned_cols=42 Identities=19% Similarity=0.322 Sum_probs=29.6
Q ss_pred HHHHHHHHHhcCCCeEEEE-e---ecCChhhHHHHHhCCCEEEecC
Q 026808 163 IAKAEAQARGWGCRSIALH-C---DFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 163 l~~~~~~a~~~g~~~i~l~-~---~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
++.+++.|++.|++++=+- + ..+-..-.++++.+||+++...
T Consensus 43 veEiieFak~mgykkiGiAfCiGL~~EA~~~~~iL~~~gFev~sV~ 88 (157)
T PF08901_consen 43 VEEIIEFAKRMGYKKIGIAFCIGLRKEARILAKILEANGFEVYSVC 88 (157)
T ss_pred HHHHHHHHHHcCCCeeeehhhHhHHHHHHHHHHHHHHCCCEEEEEE
Confidence 6788899999999987553 2 2222334577889999998753
No 156
>PRK15312 antimicrobial resistance protein Mig-14; Provisional
Probab=37.05 E-value=66 Score=25.93 Aligned_cols=30 Identities=17% Similarity=0.091 Sum_probs=21.9
Q ss_pred EEEEccCcccccHHHHHH----HHHHHHHHhcCC
Q 026808 146 NVAVREKFRRKGIAKRLI----AKAEAQARGWGC 175 (233)
Q Consensus 146 ~l~V~p~~rg~Gig~~Ll----~~~~~~a~~~g~ 175 (233)
.-+++|++...-+|+-|+ +.+-++|.+.+-
T Consensus 235 NgG~Dpe~~~~spGSIL~WlNi~~A~~~~~~~~K 268 (298)
T PRK15312 235 NGAVKNECMPLSPGSILMWLNISRARHYCQERQK 268 (298)
T ss_pred cCccCcccccCCCccEEEEecHHHHHHHHHhcCC
Confidence 568999999999999875 555555555543
No 157
>PRK09319 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein; Provisional
Probab=36.09 E-value=1.1e+02 Score=27.13 Aligned_cols=36 Identities=19% Similarity=0.145 Sum_probs=27.5
Q ss_pred HHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCC
Q 026808 169 QARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 169 ~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~ 206 (233)
..+..|+..+.|.+ +|+.-+.-.+.+|.+++++.+.
T Consensus 345 IL~dLGI~kIrLLT--NNP~Ki~~L~~~GIeVv~rvpl 380 (555)
T PRK09319 345 ILNDLGIKRLRLIT--NNPRKIAGLGGYGLEVVDRVPL 380 (555)
T ss_pred HHHHcCCCEEEECC--CCHHHHHHHHhCCCEEEEEecc
Confidence 34455888887755 5788888899999999987754
No 158
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism]
Probab=35.95 E-value=1.2e+02 Score=22.57 Aligned_cols=45 Identities=18% Similarity=0.224 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecC
Q 026808 159 AKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 159 g~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
|+-|+.++++.+++ .++.+.+.+++..+.-..+..+.|++.+...
T Consensus 26 GkpLI~~v~~al~~-~~d~i~v~isp~tp~t~~~~~~~gv~vi~tp 70 (177)
T COG2266 26 GKPLIDRVLEALRK-IVDEIIVAISPHTPKTKEYLESVGVKVIETP 70 (177)
T ss_pred CccHHHHHHHHHHh-hcCcEEEEeCCCCHhHHHHHHhcCceEEEcC
Confidence 67899999998877 7889999999988888888999998887753
No 159
>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.
Probab=35.60 E-value=39 Score=22.23 Aligned_cols=29 Identities=17% Similarity=0.123 Sum_probs=20.2
Q ss_pred CCeEEEEeecCChhhHHHHHhCCCEEEecC
Q 026808 175 CRSIALHCDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 175 ~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
+..+.+.|.. =.++.+||..+||+.....
T Consensus 3 i~hv~l~v~d-~~~s~~FY~~lG~~~~~~~ 31 (112)
T cd08344 3 IDHFALEVPD-LEVARRFYEAFGLDVREEG 31 (112)
T ss_pred eeEEEEecCC-HHHHHHHHHHhCCcEEeec
Confidence 3455565542 2688999999999987544
No 160
>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins. BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.
Probab=35.29 E-value=36 Score=22.71 Aligned_cols=19 Identities=16% Similarity=0.169 Sum_probs=15.9
Q ss_pred hhhHHHHHhCCCEEEecCC
Q 026808 187 LGATKLYKGQGFKCVKVPE 205 (233)
Q Consensus 187 ~~a~~~y~k~Gf~~~~~~~ 205 (233)
.++.+||+++||+......
T Consensus 14 ~~s~~FY~~lG~~~~~~~~ 32 (120)
T cd08350 14 DATEAFYARLGFSVGYRQA 32 (120)
T ss_pred HHHHHHHHHcCCEEEecCC
Confidence 6889999999999877654
No 161
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A ....
Probab=34.79 E-value=1.5e+02 Score=23.69 Aligned_cols=65 Identities=11% Similarity=0.100 Sum_probs=42.2
Q ss_pred eEEEEEEEccCccccc--HHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCC
Q 026808 142 AYISNVAVREKFRRKG--IAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 142 ~~i~~l~V~p~~rg~G--ig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~ 206 (233)
.+|.++.-++++-..| +-.+.+..-+..+++.|+..|++.-.+..+.-..+..++|+-+..+...
T Consensus 15 ~~l~Gv~~h~~~~~~g~a~~~~~~~~d~~l~k~~G~N~iR~~h~p~~~~~~~~cD~~GilV~~e~~~ 81 (298)
T PF02836_consen 15 IFLRGVNRHQDYPGLGRAMPDEAMERDLELMKEMGFNAIRTHHYPPSPRFYDLCDELGILVWQEIPL 81 (298)
T ss_dssp E-EEEEEE-S-BTTTBT---HHHHHHHHHHHHHTT-SEEEETTS--SHHHHHHHHHHT-EEEEE-S-
T ss_pred EEEEEEeeCcCcccccccCCHHHHHHHHHHHHhcCcceEEcccccCcHHHHHHHhhcCCEEEEeccc
Confidence 6777777777664444 5567788888899999999999966655667777788999998877654
No 162
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=34.57 E-value=73 Score=24.88 Aligned_cols=43 Identities=19% Similarity=0.211 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhcCCCeEEEE---eecCChhhHHHHHhCCCEEEecC
Q 026808 162 LIAKAEAQARGWGCRSIALH---CDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 162 Ll~~~~~~a~~~g~~~i~l~---~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
-...+.+-++..|+++|.+. ...-|....+||++.||+++...
T Consensus 107 ~~~A~~~AL~alg~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~ 152 (239)
T TIGR02990 107 PSSAAVDGLAALGVRRISLLTPYTPETSRPMAQYFAVRGFEIVNFT 152 (239)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCcHHHHHHHHHHHHhCCcEEeeee
Confidence 34455566666799998885 45567788999999999998764
No 163
>PF02100 ODC_AZ: Ornithine decarboxylase antizyme; InterPro: IPR002993 Ornithine decarboxylase antizyme (ODC-AZ) [] binds to, and destabilises, ornithine decarboxylase (ODC), a key enzyme in polyamine synthesis. ODC is then rapidly degraded. The expression of ODC-AZ requires programmed, ribosomal frameshifting which is modulated according to the cellular concentration of polyamines. High levels of polyamines induce a +1 ribosomal frameshift in the translation of mRNA for the antizyme leading to the expression of a full-length protein. At least two forms of ODC-AZ exist in mammals [] and the protein has been found in Drosophila (protein Gutfeeling).; GO: 0004857 enzyme inhibitor activity, 0008073 ornithine decarboxylase inhibitor activity; PDB: 1ZO0_A.
Probab=34.51 E-value=1.1e+02 Score=20.60 Aligned_cols=55 Identities=20% Similarity=0.274 Sum_probs=24.1
Q ss_pred EccCcccccHHHHHHHHHHHHHHhc-CCCeEEEEeecCChhhHHHHHh---CCCEEEecC
Q 026808 149 VREKFRRKGIAKRLIAKAEAQARGW-GCRSIALHCDFNNLGATKLYKG---QGFKCVKVP 204 (233)
Q Consensus 149 V~p~~rg~Gig~~Ll~~~~~~a~~~-g~~~i~l~~~~~n~~a~~~y~k---~Gf~~~~~~ 204 (233)
+.+...++| -++-+-.+++.|.+. ++..+.+.+..+......+-+. .||+.+.-.
T Consensus 30 ip~~~~~~~-~K~~lvaLLElAee~L~c~~vvic~~k~~~d~~~Llr~l~~vGF~lv~~~ 88 (108)
T PF02100_consen 30 IPSSALGQG-SKESLVALLELAEEKLGCSHVVICLDKNRPDRASLLRTLMWVGFELVTPG 88 (108)
T ss_dssp -SS---SS---SHHHHHHHHHHHHHH----EEEEE---SS-HHHHHHHHTTT--EEE---
T ss_pred ECCcccccc-cHHHHHHHHHHhcCcCCCCEEEEEEECCchhHHHhhhhcEeeccEecCCC
Confidence 344444444 567777888888765 9999999887766554444444 488877643
No 164
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=33.02 E-value=2.8e+02 Score=22.82 Aligned_cols=28 Identities=18% Similarity=0.087 Sum_probs=20.9
Q ss_pred CCCCCCceEEEeCCcccHHHHHhhhhhc
Q 026808 17 XXXXSPEIVVREARIEDIWEVAETHCSC 44 (233)
Q Consensus 17 ~~~~~~~i~iR~~~~~D~~~i~~l~~~~ 44 (233)
.|..+..--+|+++.+|++++..|+.+.
T Consensus 252 lp~~tkt~GlR~~e~kD~~~v~~L~~~y 279 (451)
T COG5092 252 LPAKTKTEGLRLAEEKDMEDVARLYLEY 279 (451)
T ss_pred CCccCCCcccchhhhhCHHHHHHHHHHH
Confidence 3333333458999999999999998855
No 165
>TIGR03628 arch_S11P archaeal ribosomal protein S11P. This model describes exclusively the archaeal ribosomal protein S11P. It excludes homologous ribosomal proteins S14 from eukaryotes and S11 from bacteria.
Probab=32.85 E-value=1.6e+02 Score=20.08 Aligned_cols=49 Identities=12% Similarity=0.218 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEeec-----------CChhhHHHHHhCCCEEEecCCCC
Q 026808 159 AKRLIAKAEAQARGWGCRSIALHCDF-----------NNLGATKLYKGQGFKCVKVPEGA 207 (233)
Q Consensus 159 g~~Ll~~~~~~a~~~g~~~i~l~~~~-----------~n~~a~~~y~k~Gf~~~~~~~~~ 207 (233)
++..-+.+.+.+.++|++.+.+.+.. ....+++-..+.|+++....+..
T Consensus 48 Aq~aa~~~~~~~~~~Gi~~v~v~ikG~gg~~~~~~G~Gr~~air~l~~~glkI~~I~DvT 107 (114)
T TIGR03628 48 AMQAAGRAAEKAKERGITGLHIKVRAPGGNGQKSPGPGAQAAIRALARAGLRIGRIEDVT 107 (114)
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEEEecCCCCCCCCCCcHHHHHHHHHHCCCEEEEEEEcC
Confidence 44556788888888999999988755 44567888999999987765443
No 166
>TIGR00505 ribA GTP cyclohydrolase II. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal. The function of archaeal members of the family has not been demonstrated and is assigned tentatively.
Probab=32.83 E-value=1.3e+02 Score=22.57 Aligned_cols=47 Identities=15% Similarity=0.241 Sum_probs=35.9
Q ss_pred ccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCC
Q 026808 150 REKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPE 205 (233)
Q Consensus 150 ~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~ 205 (233)
.+++|.-|+|.++|+. .|+..+.|.++ |+.-+.-...+|-++++..+
T Consensus 121 ~~d~R~yGiGAQIL~d-------LGV~~~rLLtn--~~~k~~~L~g~gleVv~~~~ 167 (191)
T TIGR00505 121 PADERDFSLCADILED-------LGVKKVRLLTN--NPKKIEILKKAGINIVERVP 167 (191)
T ss_pred cccceehhHHHHHHHH-------cCCCEEEECCC--CHHHHHHHHhCCCEEEEEec
Confidence 4568999999988764 48999888554 55566777899999987764
No 167
>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase. This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.
Probab=32.77 E-value=43 Score=22.07 Aligned_cols=27 Identities=7% Similarity=0.031 Sum_probs=18.9
Q ss_pred eEEEEeecCChhhHHHHHhCCCEEEecC
Q 026808 177 SIALHCDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 177 ~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
.+.+.|.. =.++.+||+.+||+...+.
T Consensus 6 hv~l~v~D-l~~s~~FY~~lGl~~~~~~ 32 (113)
T cd07267 6 HVRFEHPD-LDKAERFLTDFGLEVAART 32 (113)
T ss_pred EEEEccCC-HHHHHHHHHHcCCEEEEec
Confidence 45555543 2578999999999886654
No 168
>PLN02831 Bifunctional GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone-4-phosphate synthase
Probab=31.79 E-value=1.3e+02 Score=26.10 Aligned_cols=35 Identities=29% Similarity=0.277 Sum_probs=26.2
Q ss_pred HHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCC
Q 026808 170 ARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 170 a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~ 206 (233)
.+..|+..+.|.+ +|+.-+.-.+.+|.+++++.+.
T Consensus 376 L~dLGI~~irLLT--NNp~K~~~L~~~GieVve~vp~ 410 (450)
T PLN02831 376 LRDLGVRTMRLMT--NNPAKYTGLKGYGLAVVGRVPL 410 (450)
T ss_pred HHHcCCCEEEECC--CCHHHHHHHhhCCCEEEEEecc
Confidence 3445888887754 4777788889999999987653
No 169
>cd04263 DUF619-NAGK-FABP DUF619 domain of N-acetylglutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway. DUF619-NAGK-FABP: DUF619 domain of N-acetylglutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (FABP). The nuclear-encoded, mitochondrial polyprotein precursor (ARG5,6) consists of an N-terminal NAGK (ArgB) domain, a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved into two distinct enzymes (NAGK-DUF619 and NAGPR) in the mitochondria. Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. Arg5,6 catalyzes the second reaction of arginine biosynthesis; the phosphorylation of the gamma-carboxyl group of NAG to produce N-acetylglutamylphosphate (NAGP) which is subsequently converted to ornithine in two more steps. It also binds and regulates the promoters of nuclear and mitochondrial genes, and may possibly regu
Probab=31.74 E-value=1.6e+02 Score=19.54 Aligned_cols=43 Identities=5% Similarity=0.101 Sum_probs=33.6
Q ss_pred CeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCCh
Q 026808 140 GIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNL 187 (233)
Q Consensus 140 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~ 187 (233)
...+++.+.|..+-++.|++..++..+.+. .+.+.-.+.++|+
T Consensus 32 ~vp~LdkF~vs~~~~l~~vaD~Vf~~i~~d-----~p~L~W~~r~~n~ 74 (98)
T cd04263 32 EVATLATFTITKSGWLNNVADNIFTAIKKD-----HPKLVWTVREDDE 74 (98)
T ss_pred CCEEEEEEEEccccccccHHHHHHHHHHhh-----CCeeEEEeCCCCC
Confidence 448999999999999999999999988764 2355556666665
No 170
>PRK00393 ribA GTP cyclohydrolase II; Reviewed
Probab=31.00 E-value=95 Score=23.40 Aligned_cols=48 Identities=15% Similarity=0.198 Sum_probs=36.2
Q ss_pred EccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCC
Q 026808 149 VREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPE 205 (233)
Q Consensus 149 V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~ 205 (233)
..+++|.-|+|.++|+. .|+..+.|.++ |+.-..-...+|.++++..+
T Consensus 123 ~~~d~R~yGiGAQIL~d-------LGV~~mrLLtn--~~~k~~~L~g~GleV~~~~~ 170 (197)
T PRK00393 123 FAADERDYTLAADMLKA-------LGVKKVRLLTN--NPKKVEALTEAGINIVERVP 170 (197)
T ss_pred CCccceehhHHHHHHHH-------cCCCEEEECCC--CHHHHHHHHhCCCEEEEEec
Confidence 35579999999988763 58999887554 55556667799999987663
No 171
>PRK14831 undecaprenyl pyrophosphate synthase; Provisional
Probab=30.73 E-value=70 Score=25.21 Aligned_cols=34 Identities=6% Similarity=0.073 Sum_probs=30.4
Q ss_pred cCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 151 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 151 p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
+...|+-.|..-+..++++|.+.|++.+.+.+.+
T Consensus 41 ~~~~GH~~G~~~l~~i~~~c~~~GI~~vT~yaFS 74 (249)
T PRK14831 41 PRIMGHRRGVDALKDLLRCCKDWGIGALTAYAFS 74 (249)
T ss_pred chhhhHHHHHHHHHHHHHHHHHcCCCEEEEeecc
Confidence 4567888899999999999999999999999876
No 172
>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS). HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su
Probab=30.28 E-value=82 Score=21.64 Aligned_cols=28 Identities=14% Similarity=0.195 Sum_probs=19.6
Q ss_pred eEEEEeecCChhhHHHHHh-CCCEEEecCC
Q 026808 177 SIALHCDFNNLGATKLYKG-QGFKCVKVPE 205 (233)
Q Consensus 177 ~i~l~~~~~n~~a~~~y~k-~Gf~~~~~~~ 205 (233)
.+.+.|. +=.++.+||++ +||+......
T Consensus 3 Hi~i~V~-D~e~s~~FY~~vLGf~~~~~~~ 31 (136)
T cd08342 3 HVEFYVG-NAKQLASWFSTKLGFEPVAYHG 31 (136)
T ss_pred EEEEEeC-CHHHHHHHHHHhcCCeEEEecC
Confidence 3455553 33688999998 8999877543
No 173
>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.
Probab=30.14 E-value=73 Score=20.97 Aligned_cols=29 Identities=17% Similarity=0.240 Sum_probs=19.4
Q ss_pred CCeEEEEeecCChhhHHHHHh-CCCEEEecC
Q 026808 175 CRSIALHCDFNNLGATKLYKG-QGFKCVKVP 204 (233)
Q Consensus 175 ~~~i~l~~~~~n~~a~~~y~k-~Gf~~~~~~ 204 (233)
+..+.+.|..- ..+.+||++ +||+.....
T Consensus 2 i~hv~l~v~d~-~~a~~FY~~~lG~~~~~~~ 31 (126)
T cd08346 2 LHHVTLITRDA-QETVDFYTDVLGLRLVKKT 31 (126)
T ss_pred cccEEEEcCCh-hHhHHHHHHccCCEEeeeE
Confidence 34455655432 688999976 799987654
No 174
>TIGR00055 uppS undecaprenyl diphosphate synthase. Alternate name: undecaprenyl pyrophosphate synthetase. Activity has been demonstrated experimentally for members of this family from Micrococcus luteus, E. coli, Haemophilus influenzae, and Streptococcus pneumoniae.
Probab=29.70 E-value=83 Score=24.38 Aligned_cols=34 Identities=6% Similarity=-0.014 Sum_probs=30.3
Q ss_pred cCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 151 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 151 p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
|...|+--|-.-+..++++|.+.|++.+.+.+.+
T Consensus 20 ~~~~GH~~G~~~~~~v~~~c~~~GI~~lT~yaFS 53 (226)
T TIGR00055 20 PRAYGHKAGVKSLRRILRWCANLGVECLTLYAFS 53 (226)
T ss_pred ChhHhHHHHHHHHHHHHHHHHHcCCCEEEEEEee
Confidence 6667888899999999999999999999998755
No 175
>PRK14837 undecaprenyl pyrophosphate synthase; Provisional
Probab=29.63 E-value=85 Score=24.42 Aligned_cols=34 Identities=9% Similarity=-0.008 Sum_probs=30.3
Q ss_pred cCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 151 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 151 p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
|...|+--|-.-+..++++|.+.|++.+.+.+.+
T Consensus 27 ~~~~GH~~G~~~~~~i~~~c~~~GI~~lT~YaFS 60 (230)
T PRK14837 27 SFFEGHKEGLKRAKEIVKHSLKLGIKYLSLYVFS 60 (230)
T ss_pred chhhhHHHHHHHHHHHHHHHHHcCCCEEEEEEee
Confidence 6677888899999999999999999999998755
No 176
>PRK09311 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=29.37 E-value=1.4e+02 Score=25.36 Aligned_cols=35 Identities=23% Similarity=0.190 Sum_probs=25.8
Q ss_pred HHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCC
Q 026808 170 ARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 170 a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~ 206 (233)
.+..|+..+.|.+ +|+.-+.-.+.+|.+++++.+.
T Consensus 342 L~~LGv~~irLLT--nnp~K~~~L~~~GieV~~~v~~ 376 (402)
T PRK09311 342 LVDLGVRSMRLLT--NNPRKIAGLQGYGLHVTERVPL 376 (402)
T ss_pred HHHcCCCEEEECC--CCHHHHHHHhhCCCEEEEEecc
Confidence 3445888887755 4676777788999999987643
No 177
>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=28.98 E-value=80 Score=21.87 Aligned_cols=26 Identities=19% Similarity=0.360 Sum_probs=17.7
Q ss_pred EEEEeecCChhhHHHHH-hCCCEEEecC
Q 026808 178 IALHCDFNNLGATKLYK-GQGFKCVKVP 204 (233)
Q Consensus 178 i~l~~~~~n~~a~~~y~-k~Gf~~~~~~ 204 (233)
+.+.|. +-.+|++||+ .+||+..++.
T Consensus 6 v~irV~-DlerSi~FY~~vLG~~~~~~~ 32 (127)
T cd08358 6 FVFKVG-NRNKTIKFYREVLGMKVLRHE 32 (127)
T ss_pred EEEEeC-CHHHHHHHHHHhcCCEEEeee
Confidence 344443 3378999995 5899987644
No 178
>PRK09607 rps11p 30S ribosomal protein S11P; Reviewed
Probab=28.28 E-value=2.2e+02 Score=20.07 Aligned_cols=51 Identities=14% Similarity=0.177 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEeec-----------CChhhHHHHHhCCCEEEecCCCCCC
Q 026808 159 AKRLIAKAEAQARGWGCRSIALHCDF-----------NNLGATKLYKGQGFKCVKVPEGANW 209 (233)
Q Consensus 159 g~~Ll~~~~~~a~~~g~~~i~l~~~~-----------~n~~a~~~y~k~Gf~~~~~~~~~~~ 209 (233)
++..-+.+.+.+.+.|++.+.+.+.. ....+++-..+.|+++....+....
T Consensus 55 Aq~aae~~~~~~~~~Gi~~v~v~vkG~Ggn~~~~~G~Gr~~airal~~~glkI~~I~DvTpi 116 (132)
T PRK09607 55 AMQAAEKAAEDAKEKGITGVHIKVRAPGGNGQKSPGPGAQAAIRALARAGLRIGRIEDVTPI 116 (132)
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEEEecCCCCCcCCCCcHHHHHHHHHHCCCEEEEEEEcCCC
Confidence 44556777888888999999998765 3346888899999998876544433
No 179
>PRK08815 GTP cyclohydrolase; Provisional
Probab=27.22 E-value=2e+02 Score=24.28 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=25.2
Q ss_pred HhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCC
Q 026808 171 RGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 171 ~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~ 206 (233)
+..|+..+.|.++ |+.-..-.+.+|.+++++.+.
T Consensus 309 ~dLGV~kirLLTn--np~K~~~L~g~gieVv~~vp~ 342 (375)
T PRK08815 309 RGLGITRVRLLTN--NPTKAERLRAAGIEVEDRIRV 342 (375)
T ss_pred HHcCCCeEEECCC--CHHHHHHHHhCCCEEEEEecc
Confidence 3458888888554 676677788999999987643
No 180
>PF00411 Ribosomal_S11: Ribosomal protein S11; InterPro: IPR001971 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. Ribosomal protein S11 [] plays an essential role in selecting the correct tRNA in protein biosynthesis. It is located on the large lobe of the small ribosomal subunit. On the basis of sequence similarities, S11 belongs to a family of bacterial, archaeal and eukaryotic ribosomal proteins [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2YKR_K 3U5C_O 3O2Z_H 3IZB_K 3U5G_O 3O30_H 1S1H_K 3BBN_K 2XZN_K 2XZM_K ....
Probab=26.98 E-value=2e+02 Score=19.31 Aligned_cols=49 Identities=20% Similarity=0.258 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEeecCCh---hhHHHHHhCCCEEEecCCCC
Q 026808 159 AKRLIAKAEAQARGWGCRSIALHCDFNNL---GATKLYKGQGFKCVKVPEGA 207 (233)
Q Consensus 159 g~~Ll~~~~~~a~~~g~~~i~l~~~~~n~---~a~~~y~k~Gf~~~~~~~~~ 207 (233)
++.+...+.+.+.+.|+..+.+.+...++ .+++.+.+.|+.+....+..
T Consensus 45 a~~~a~~~~~~~~~~gi~~v~v~ikG~g~gr~~~lk~l~~~gl~I~~I~D~T 96 (110)
T PF00411_consen 45 AQQAAEKIAKKAKELGIKTVRVKIKGFGPGREAALKALKKSGLKIVSITDVT 96 (110)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEESSSTTHHHHHHHHHHTTSEEEEEEEET
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEEcCCCccHHHHHHHHHhcCCEEEEEEeec
Confidence 44667788888888899999888765443 56777888999887655443
No 181
>PF03376 Adeno_E3B: Adenovirus E3B protein; InterPro: IPR005041 Adenoviruses are medium-sized, non-enveloped viruses containing double-stranded DNA. They can cause a variety of diseases including pneumonia, cystitis, conjunctivitis and diarrhoea, all of which can be fatal to patients who are immunocompromised []. These viruses have many mechanisms to evade the host immune response, including several proteins which are expressed as part of the early transcription unit 3 (E3) []. One of the regions of E3, known as the E3B region, encodes three proteins known as 10.4K, 14.5K and 14.7K. Two of these proteins, 10.4K and 14.5K, form the RID complex (receptor internalisation and degradation) which protects the infected cell from host-induced lysis by clearing the the TNF and Fas receptors from the cell surface []. Other receptors, such as the epidermal growth factor receptor, are also known to be cleared by RID []. This entry represents the E3B region 10.4K protein, also known as the RID alpha subunit.; GO: 0016020 membrane
Probab=26.80 E-value=31 Score=20.72 Aligned_cols=13 Identities=31% Similarity=0.514 Sum_probs=10.2
Q ss_pred ccCcccccHHHHH
Q 026808 150 REKFRRKGIAKRL 162 (233)
Q Consensus 150 ~p~~rg~Gig~~L 162 (233)
+|+||++-|++.|
T Consensus 53 hPqYrn~~iA~LL 65 (67)
T PF03376_consen 53 HPQYRNQQIAALL 65 (67)
T ss_pred CchhcCHHHHHHh
Confidence 6888888888754
No 182
>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge
Probab=26.54 E-value=63 Score=21.25 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=20.2
Q ss_pred CCCeEEEEeecCChhhHHHHHh-CCCEEEecCC
Q 026808 174 GCRSIALHCDFNNLGATKLYKG-QGFKCVKVPE 205 (233)
Q Consensus 174 g~~~i~l~~~~~n~~a~~~y~k-~Gf~~~~~~~ 205 (233)
++..+.+.+.. =.++.+||++ +||+......
T Consensus 3 ~i~hv~l~v~d-~~~s~~FY~~~lG~~~~~~~~ 34 (120)
T cd08362 3 ALRGVGLGVPD-LAAAAAFYREVWGLSVVAEDD 34 (120)
T ss_pred eeeEEEEecCC-HHHHHHHHHhCcCcEEEEecC
Confidence 34456665542 2678899987 7998775543
No 183
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=26.36 E-value=4.1e+02 Score=23.72 Aligned_cols=57 Identities=12% Similarity=0.045 Sum_probs=43.1
Q ss_pred CeEEEEEEeecccCCCCCCCCCCcCCCCeeEEEEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEe
Q 026808 113 GYVAGILTVDTVADFLPRKGPLRQRRTGIAYISNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHC 182 (233)
Q Consensus 113 ~~ivG~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~ 182 (233)
|+|+|++.+-+.. ......++.+--+|+- -+|+-..|+..++.++++.|++++.+..
T Consensus 402 g~VvaFa~l~~~~------------~~~~~SlDlMR~sp~a-p~g~mdfLf~~li~~aKe~G~~~fsLgm 458 (538)
T COG2898 402 GEVVAFANLMPTG------------GKEGYSLDLMRRSPDA-PNGTMDFLFSELILWAKEEGYQRFSLGM 458 (538)
T ss_pred CCeEEEEeecccC------------CcceeEEEeeecCCCC-CchHHHHHHHHHHHHHHHcCCeEEecCC
Confidence 7788888874311 1122667777777763 5799999999999999999999998863
No 184
>PF01255 Prenyltransf: Putative undecaprenyl diphosphate synthase; InterPro: IPR001441 Synonym(s): Di-trans-poly-cis-undecaprenyl-diphosphate synthase, Undecaprenyl pyrophosphate synthetase, Undecaprenyl pyrophosphate synthase, UPP synthetase Di-trans-poly-cis-decaprenylcistransferase (2.5.1.31 from EC) (UPP synthetase) generates undecaprenyl pyrophosphate (UPP) from isopentenyl pyrophosphate (IPP) []. This bacterial enzyme is also found in archaebacteria and in a number of uncharacterised proteins including some from yeasts. This entry also matches related enzymes that transfer alkyl groups, such as dehydrodolichyl diphosphate synthase.; GO: 0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups; PDB: 2D2R_B 2DTN_B 1F75_B 1X07_A 2E9D_A 1JP3_A 3QAS_A 1X09_A 1V7U_B 2E9A_A ....
Probab=26.08 E-value=91 Score=24.02 Aligned_cols=34 Identities=3% Similarity=-0.061 Sum_probs=28.4
Q ss_pred cCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 151 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 151 p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
|...|+..|-+-+..++++|.+.|++.+.+.+.+
T Consensus 15 ~~~~Gh~~G~~~l~~i~~~~~~~gI~~lTvYaFS 48 (223)
T PF01255_consen 15 PRSEGHRAGAEKLKEIVEWCLELGIKYLTVYAFS 48 (223)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHCT-SEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEEec
Confidence 3456777889999999999999999999999766
No 185
>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1.13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-
Probab=26.00 E-value=79 Score=21.03 Aligned_cols=28 Identities=4% Similarity=-0.077 Sum_probs=19.3
Q ss_pred CCeEEEEeecCChhhHHHHHh-CCCEEEec
Q 026808 175 CRSIALHCDFNNLGATKLYKG-QGFKCVKV 203 (233)
Q Consensus 175 ~~~i~l~~~~~n~~a~~~y~k-~Gf~~~~~ 203 (233)
+..+.+.|..- .+|.+||+. +||+...+
T Consensus 3 l~~v~l~v~Dl-~~s~~FY~~~LG~~~~~~ 31 (120)
T cd07252 3 LGYLGVESSDL-DAWRRFATDVLGLQVGDR 31 (120)
T ss_pred ccEEEEEeCCH-HHHHHHHHhccCceeccC
Confidence 44566666533 578999966 79987654
No 186
>PRK10150 beta-D-glucuronidase; Provisional
Probab=26.00 E-value=3.2e+02 Score=24.63 Aligned_cols=69 Identities=14% Similarity=0.101 Sum_probs=50.5
Q ss_pred CCCeeEEEEEEEccCc--ccccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCC
Q 026808 138 RTGIAYISNVAVREKF--RRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 138 ~~~~~~i~~l~V~p~~--rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~ 206 (233)
+++-.++.++.-+++. +|.++..+.+..-++.+++.|+..|++.-.+..+....+.-++|+-+..+.+.
T Consensus 288 NG~pv~lrG~~~h~~~~~~G~a~~~~~~~~d~~l~K~~G~N~vR~sh~p~~~~~~~~cD~~GllV~~E~p~ 358 (604)
T PRK10150 288 NGKPFYFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETPA 358 (604)
T ss_pred CCEEEEEEeeeccCCCCccCCcCCHHHHHHHHHHHHHCCCCEEEeccCCCCHHHHHHHHhcCcEEEEeccc
Confidence 3444677777777665 45556677777788899999999999865555566677778899998887653
No 187
>PRK03681 hypA hydrogenase nickel incorporation protein; Validated
Probab=25.89 E-value=98 Score=21.02 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=19.0
Q ss_pred ccHHHHHHHHHHHHHHhcCCCeE
Q 026808 156 KGIAKRLIAKAEAQARGWGCRSI 178 (233)
Q Consensus 156 ~Gig~~Ll~~~~~~a~~~g~~~i 178 (233)
.+|+..+++.+.+.|+++|..++
T Consensus 4 ~si~~~iv~~v~~~a~~~~~~~V 26 (114)
T PRK03681 4 ITLCQRALELIEQQAAKHGAKRV 26 (114)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeE
Confidence 46889999999999999876654
No 188
>COG2231 Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]
Probab=25.33 E-value=57 Score=24.83 Aligned_cols=40 Identities=23% Similarity=0.061 Sum_probs=32.3
Q ss_pred ccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEe
Q 026808 156 KGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVK 202 (233)
Q Consensus 156 ~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~ 202 (233)
+|||++-.+.++-+|.++.. ..++ .-+.+++.++|+....
T Consensus 121 KGIG~ETaDsILlYa~~rp~----FVvD---~Yt~R~l~rlg~i~~k 160 (215)
T COG2231 121 KGIGKETADSILLYALDRPV----FVVD---KYTRRLLSRLGGIEEK 160 (215)
T ss_pred CCcchhhHHHHHHHHhcCcc----cchh---HHHHHHHHHhcccccc
Confidence 89999999999999987632 2334 7779999999998763
No 189
>PRK14832 undecaprenyl pyrophosphate synthase; Provisional
Probab=25.10 E-value=1e+02 Score=24.37 Aligned_cols=34 Identities=9% Similarity=0.192 Sum_probs=30.2
Q ss_pred cCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 151 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 151 p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
|...|+--|-.-+..++++|.+.|++.+.+.+.+
T Consensus 39 ~~~~GH~~G~~~l~~i~~~c~~~gI~~lTvyaFS 72 (253)
T PRK14832 39 PRIAGHRQGARTLKELLRCCKDWGIKALTAYAFS 72 (253)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEEee
Confidence 5677888899999999999999999999998755
No 190
>cd00475 CIS_IPPS Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS); homodimers which catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase) catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidooglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS are mechanistically and structurally distinct from trans-IPPS, lacking the DDXXD motifs, yet requiring Mg2+ for activity.
Probab=24.70 E-value=1.1e+02 Score=23.55 Aligned_cols=34 Identities=6% Similarity=0.039 Sum_probs=30.0
Q ss_pred cCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 151 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 151 p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
|...|+--|-.-+..++++|.+.|++.+.+.+.+
T Consensus 21 ~~~~GH~~G~~~~~~i~~~~~~~gI~~lTvyaFS 54 (221)
T cd00475 21 DRIEGHKAGAEKLRDILRWCLELGVKEVTLYAFS 54 (221)
T ss_pred ChhHhHHHHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 5667888899999999999999999999998754
No 191
>PRK12485 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional
Probab=24.34 E-value=1.2e+02 Score=25.47 Aligned_cols=35 Identities=9% Similarity=-0.029 Sum_probs=23.3
Q ss_pred HHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecC
Q 026808 167 EAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVP 204 (233)
Q Consensus 167 ~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~ 204 (233)
.+..+..|+..+.|. +|+.-+.-.+.+|.+++++.
T Consensus 331 AqILr~LGV~kirLL---nNP~K~~~L~~~GIeV~~~v 365 (369)
T PRK12485 331 AQILQDLGVGKLRHL---GPPLKYAGLTGYDLEVVESI 365 (369)
T ss_pred HHHHHHcCCCEEEEC---CCchhhhhhhhCCcEEEEEe
Confidence 344455688888875 35666666778888877654
No 192
>TIGR03645 glyox_marine lactoylglutathione lyase family protein. Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.
Probab=24.33 E-value=83 Score=22.58 Aligned_cols=28 Identities=18% Similarity=0.174 Sum_probs=19.9
Q ss_pred CCCeEEEEeecCChhhHHHHHh-CCCEEEe
Q 026808 174 GCRSIALHCDFNNLGATKLYKG-QGFKCVK 202 (233)
Q Consensus 174 g~~~i~l~~~~~n~~a~~~y~k-~Gf~~~~ 202 (233)
++..+.+.|.. =.+|+.||++ +||+.+.
T Consensus 4 ~i~Hv~i~V~D-le~s~~FY~~~LG~~~~~ 32 (162)
T TIGR03645 4 TFSHIGISVPD-LDAAVKFYTEVLGWYLIM 32 (162)
T ss_pred eEEEEEEEeCC-HHHHHHHHHHhcCCEEEe
Confidence 44556666643 3689999977 8998764
No 193
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane]
Probab=24.31 E-value=2.1e+02 Score=22.35 Aligned_cols=46 Identities=15% Similarity=0.157 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCCC
Q 026808 159 AKRLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 159 g~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~~ 206 (233)
|+-|+.++.+.|.+.|..++++-++. +.-...-+++|++.+-+..+
T Consensus 27 GkpmI~rV~e~a~~s~~~rvvVATDd--e~I~~av~~~G~~avmT~~~ 72 (247)
T COG1212 27 GKPMIVRVAERALKSGADRVVVATDD--ERIAEAVQAFGGEAVMTSKD 72 (247)
T ss_pred CchHHHHHHHHHHHcCCCeEEEEcCC--HHHHHHHHHhCCEEEecCCC
Confidence 56789999999998899988876654 66678889999998887654
No 194
>PRK14841 undecaprenyl pyrophosphate synthase; Provisional
Probab=24.02 E-value=1.2e+02 Score=23.73 Aligned_cols=34 Identities=3% Similarity=0.016 Sum_probs=30.1
Q ss_pred cCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 151 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 151 p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
|...|+--|..-+..++++|.+.|++.+.+.+.+
T Consensus 24 ~~~~GH~~G~~~l~~i~~~~~~lgIk~lTvYaFS 57 (233)
T PRK14841 24 PRIKGHQRGAEVLHNTVKWSLELGIKYLTAFSFS 57 (233)
T ss_pred chhhhHHHHHHHHHHHHHHHHHcCCCEEEEEeee
Confidence 5667888899999999999999999999998755
No 195
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=23.90 E-value=2.1e+02 Score=21.05 Aligned_cols=51 Identities=14% Similarity=0.100 Sum_probs=34.3
Q ss_pred ccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhh---HHHHHhCCCEEEecCCC
Q 026808 156 KGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGA---TKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 156 ~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a---~~~y~k~Gf~~~~~~~~ 206 (233)
.-+|+.+++.+.+...+.|+.-..-.|..-|.+. ....+++||+.+...+.
T Consensus 42 ~eva~ai~~~l~~~~~~~gi~LA~QcCEHlNRALvvEr~~a~~~~le~V~VvP~ 95 (172)
T PF04260_consen 42 LEVAEAIFEALLEVLKERGIYLAFQCCEHLNRALVVEREVAEKYGLEEVTVVPV 95 (172)
T ss_dssp HHHHHHHHHHHHHHHHTTT-EEEEE--GGGTT-EEEEHHHHHHHT--EEE-B-B
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEchhhhhHHHHhhHHHHhHcCCceEEEEcc
Confidence 4578999999999999999876666676666543 57788999999998754
No 196
>PTZ00349 dehydrodolichyl diphosphate synthetase; Provisional
Probab=23.83 E-value=1.1e+02 Score=25.08 Aligned_cols=34 Identities=0% Similarity=-0.131 Sum_probs=30.3
Q ss_pred cCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 151 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 151 p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
|...|+-.|-.-+..++++|.+.|++.+.+.+.+
T Consensus 40 ~~~~GH~~G~~~l~~il~~c~~lGIk~lTlYAFS 73 (322)
T PTZ00349 40 HSAIGHFMGSKALIQIIEICIKLKIKILSVFSFS 73 (322)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEEee
Confidence 5667888999999999999999999999998754
No 197
>PF04015 DUF362: Domain of unknown function (DUF362) ; InterPro: IPR007160 This domain is found in some iron-sulphur proteins.
Probab=23.64 E-value=1.8e+02 Score=21.79 Aligned_cols=45 Identities=9% Similarity=0.208 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEeecCC--hhhHHHHHhCCCEEEec
Q 026808 159 AKRLIAKAEAQARGWGCRSIALHCDFNN--LGATKLYKGQGFKCVKV 203 (233)
Q Consensus 159 g~~Ll~~~~~~a~~~g~~~i~l~~~~~n--~~a~~~y~k~Gf~~~~~ 203 (233)
--++++.+++.+++.|...+.+.-.+.. ......++..||.....
T Consensus 21 ~P~vv~avv~~l~~~g~~~i~i~e~~~~~~~~~~~~~~~~G~~~~~~ 67 (206)
T PF04015_consen 21 HPEVVRAVVEMLKEAGAKEIIIAESPGSGAADTREVFKRSGYEEIAE 67 (206)
T ss_pred CHHHHHHHHHHHHHcCCCceEEEeCCCcchHhHHHHHHHcchhhHHH
Confidence 3478999999999999887766544433 36788899999987754
No 198
>PRK10240 undecaprenyl pyrophosphate synthase; Provisional
Probab=23.28 E-value=1.2e+02 Score=23.65 Aligned_cols=34 Identities=12% Similarity=0.013 Sum_probs=29.6
Q ss_pred cCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 151 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 151 p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
+...|+-.|-.-+..++++|.+.|++.+.+.+.+
T Consensus 14 ~~~~GH~~G~~~l~~i~~~c~~~GI~~lT~yaFS 47 (229)
T PRK10240 14 IRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFS 47 (229)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeee
Confidence 5566788899999999999999999999998755
No 199
>PRK14842 undecaprenyl pyrophosphate synthase; Provisional
Probab=23.26 E-value=1.3e+02 Score=23.63 Aligned_cols=34 Identities=12% Similarity=0.103 Sum_probs=30.1
Q ss_pred cCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 151 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 151 p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
|...|+-.|-.-+..++++|.+.|++.+.+.+.+
T Consensus 29 ~~~~GH~~G~~~l~~i~~~c~~lgI~~vTvYaFS 62 (241)
T PRK14842 29 KRSEGHREGANAIDRLMDASLEYGLKNISLYAFS 62 (241)
T ss_pred ChhHhHHHHHHHHHHHHHHHHHcCCCEEEEEEee
Confidence 5667888899999999999999999999998755
No 200
>PRK14829 undecaprenyl pyrophosphate synthase; Provisional
Probab=22.56 E-value=1.2e+02 Score=23.74 Aligned_cols=33 Identities=12% Similarity=0.034 Sum_probs=29.7
Q ss_pred cCcccccHHHHHHHHHHHHHHhcCCCeEEEEee
Q 026808 151 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCD 183 (233)
Q Consensus 151 p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~ 183 (233)
+...|+--|..-+..++++|.+.|++.+.+.+.
T Consensus 35 ~~~~GH~~G~~~l~~iv~~c~~~gI~~vTvYaF 67 (243)
T PRK14829 35 KRTEGHKAGEPVLFDVVAGAIEAGVPYLSLYTF 67 (243)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHcCCCEEEEeee
Confidence 556788889999999999999999999999876
No 201
>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=22.45 E-value=1.2e+02 Score=19.89 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=20.4
Q ss_pred CCCeEEEEeecCChhhHHHHHh-CCCEEEecCC
Q 026808 174 GCRSIALHCDFNNLGATKLYKG-QGFKCVKVPE 205 (233)
Q Consensus 174 g~~~i~l~~~~~n~~a~~~y~k-~Gf~~~~~~~ 205 (233)
++..+.+.|. +=.++.+||++ +||+......
T Consensus 3 ~l~hi~l~v~-d~~~s~~Fy~~~lG~~~~~~~~ 34 (125)
T cd07253 3 RIDHVVLTVA-DIEATLDFYTRVLGMEVVRFGE 34 (125)
T ss_pred ccceEEEEec-CHHHHHHHHHHHhCceeecccc
Confidence 3445666654 33678899988 7998776543
No 202
>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A.
Probab=22.42 E-value=48 Score=23.50 Aligned_cols=31 Identities=16% Similarity=0.235 Sum_probs=22.0
Q ss_pred CCCeEEEEeecCChhhHHHHHhCCCEEEecCC
Q 026808 174 GCRSIALHCDFNNLGATKLYKGQGFKCVKVPE 205 (233)
Q Consensus 174 g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~ 205 (233)
|++.|...+.. -..+..+++++||+.+++..
T Consensus 9 G~dFvEFa~~~-~~~l~~~~~~lGF~~~a~hr 39 (139)
T PF14696_consen 9 GFDFVEFAVPD-AQALAQLFTALGFQPVARHR 39 (139)
T ss_dssp EEEEEEEE-SS-TTSCHHHHCCCCEEEECCEC
T ss_pred CeEEEEEecCC-HHHHHHHHHHhCcceEEecC
Confidence 55666666654 35667888999999998753
No 203
>PRK14834 undecaprenyl pyrophosphate synthase; Provisional
Probab=22.33 E-value=1.5e+02 Score=23.35 Aligned_cols=35 Identities=9% Similarity=0.015 Sum_probs=29.9
Q ss_pred cCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecC
Q 026808 151 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFN 185 (233)
Q Consensus 151 p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~ 185 (233)
+...|+--|-.-+..++++|.+.|++.+.+.+.+.
T Consensus 35 ~~~~GH~~G~~~l~~i~~~c~~lgI~~lTvYaFS~ 69 (249)
T PRK14834 35 PRAAGHRAGVEALRRVVRAAGELGIGYLTLFAFSS 69 (249)
T ss_pred chhhhHHHHHHHHHHHHHHHHHcCCCEEEEEEEec
Confidence 45567788999999999999999999999987553
No 204
>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain. This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa
Probab=22.24 E-value=1.1e+02 Score=19.93 Aligned_cols=28 Identities=14% Similarity=0.185 Sum_probs=18.8
Q ss_pred eEEEEeecCChhhHHHHHh-CCCEEEecCC
Q 026808 177 SIALHCDFNNLGATKLYKG-QGFKCVKVPE 205 (233)
Q Consensus 177 ~i~l~~~~~n~~a~~~y~k-~Gf~~~~~~~ 205 (233)
.+.+.+. +=.++.+||++ +||+......
T Consensus 5 hv~l~v~-d~~~~~~FY~~~lg~~~~~~~~ 33 (117)
T cd07240 5 YAELEVP-DLERALEFYTDVLGLTVLDRDA 33 (117)
T ss_pred EEEEecC-CHHHHHHHHHhccCcEEEeecC
Confidence 3444443 22578999988 8999887653
No 205
>PRK14840 undecaprenyl pyrophosphate synthase; Provisional
Probab=21.97 E-value=1.3e+02 Score=23.74 Aligned_cols=34 Identities=9% Similarity=0.017 Sum_probs=29.9
Q ss_pred cCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 151 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 151 p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
|...|+--|-.-+..++++|.+.|++.+.+.+.+
T Consensus 43 ~~~~GH~~G~~~l~~v~~~c~~~GIk~lTvYaFS 76 (250)
T PRK14840 43 RAISGHYYGAKSLPQIVDTALHLGIEVLTLFAFS 76 (250)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEEee
Confidence 5567888899999999999999999999998755
No 206
>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase. This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do
Probab=21.80 E-value=1e+02 Score=20.44 Aligned_cols=29 Identities=21% Similarity=0.060 Sum_probs=19.5
Q ss_pred CCeEEEEeecCChhhHHHHHh-CCCEEEecC
Q 026808 175 CRSIALHCDFNNLGATKLYKG-QGFKCVKVP 204 (233)
Q Consensus 175 ~~~i~l~~~~~n~~a~~~y~k-~Gf~~~~~~ 204 (233)
+..+.+.|.. =.++.+||++ +||+.....
T Consensus 5 l~hv~l~v~D-l~~s~~FY~~~lG~~~~~~~ 34 (122)
T cd07265 5 PGHVQLRVLD-LEEAIKHYREVLGLDEVGRD 34 (122)
T ss_pred EeEEEEEeCC-HHHHHHHHHhccCCEeeeec
Confidence 3445565543 2688999976 899987654
No 207
>TIGR01440 conserved hypothetical protein TIGR01440. Members of this family are uncharacterized proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome.
Probab=21.73 E-value=2.2e+02 Score=20.91 Aligned_cols=51 Identities=14% Similarity=0.169 Sum_probs=39.7
Q ss_pred ccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhh---HHHHHhCCCEEEecCCC
Q 026808 156 KGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGA---TKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 156 ~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a---~~~y~k~Gf~~~~~~~~ 206 (233)
.-+|+.+++.+.+...+.|+.-..-.|..-|.+- ....+++||+.+...+.
T Consensus 42 ~eva~~i~~~l~~~~~~~gi~lA~Q~CEHlNRALvvEr~~a~~~~le~V~VvP~ 95 (172)
T TIGR01440 42 MEVAETIVNALDVVLKKTGVTLAFQGCEHINRALVMERSVAEPLGMEEVSVVPD 95 (172)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEechhhhhHHHHHhHHHHHHcCCceEEEecC
Confidence 5579999999999999998876666676666443 24788999999998654
No 208
>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A ....
Probab=21.45 E-value=86 Score=20.05 Aligned_cols=19 Identities=26% Similarity=0.363 Sum_probs=15.6
Q ss_pred hhhHHHHHh-CCCEEEecCC
Q 026808 187 LGATKLYKG-QGFKCVKVPE 205 (233)
Q Consensus 187 ~~a~~~y~k-~Gf~~~~~~~ 205 (233)
.++.+||++ +||+......
T Consensus 7 ~~a~~FY~~~lg~~~~~~~~ 26 (108)
T PF12681_consen 7 EAAAAFYEDVLGFEVVFDDP 26 (108)
T ss_dssp HHHHHHHHHTTTSEEEEEET
T ss_pred HHHHHHHHHhcCCEEEEeCC
Confidence 578999998 8999988543
No 209
>PF12652 CotJB: CotJB protein; InterPro: IPR024207 The cotJ operon proteins affect spore coat composition, and is controlled by sigma E. The genes, which include CotJB, are either required for the normal formation of the inner layers of the coat or are themselves structural components of the coat []. CotJB has been identified as a spore coat protein [].
Probab=21.41 E-value=37 Score=21.42 Aligned_cols=36 Identities=11% Similarity=0.064 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhcCCCeEEEEeecCChhhHHHHHhC
Q 026808 161 RLIAKAEAQARGWGCRSIALHCDFNNLGATKLYKGQ 196 (233)
Q Consensus 161 ~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~ 196 (233)
+||+.+.+.-+..-=-.++|++++.+..|+..|.+.
T Consensus 3 ~LL~~I~~~~Fa~~dl~LyLDTHP~d~~Al~~y~~~ 38 (78)
T PF12652_consen 3 ELLREIQEVSFAVVDLNLYLDTHPDDQEALEYYNEY 38 (78)
T ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 344444444332211147899999999999888753
No 210
>PRK13690 hypothetical protein; Provisional
Probab=21.30 E-value=2.6e+02 Score=20.81 Aligned_cols=51 Identities=14% Similarity=0.144 Sum_probs=40.1
Q ss_pred ccHHHHHHHHHHHHHHhcCCCeEEEEeecCChhh---HHHHHhCCCEEEecCCC
Q 026808 156 KGIAKRLIAKAEAQARGWGCRSIALHCDFNNLGA---TKLYKGQGFKCVKVPEG 206 (233)
Q Consensus 156 ~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~~a---~~~y~k~Gf~~~~~~~~ 206 (233)
.-+|+.+++.+.+..++.|+.-..-.|..-|.+. ....+++||+.+...+.
T Consensus 49 ~eva~~i~~~l~~~~~~~gi~LA~QcCEHLNRALvvEr~~a~~~~le~V~VvP~ 102 (184)
T PRK13690 49 LEVAEAIVEALLEVLKETGIHLAVQGCEHLNRALVVEREVAEKYGLEIVTVVPV 102 (184)
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEechhhhHHHHHHhHHHHHHcCCeEEEEecC
Confidence 5579999999999999998876666676666443 35788999999998754
No 211
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=21.10 E-value=2.4e+02 Score=22.63 Aligned_cols=44 Identities=27% Similarity=0.203 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEEeecCC-----------hhhHHHHHhCCCEEEec
Q 026808 159 AKRLIAKAEAQARGWGCRSIALHCDFNN-----------LGATKLYKGQGFKCVKV 203 (233)
Q Consensus 159 g~~Ll~~~~~~a~~~g~~~i~l~~~~~n-----------~~a~~~y~k~Gf~~~~~ 203 (233)
...-|..++++|+++|+ .|.|.++... ..+.+.|++.|-.-+..
T Consensus 71 ~~~dl~elv~Ya~~KgV-gi~lw~~~~~~~~~~~~~~~~~~~f~~~~~~Gv~GvKi 125 (273)
T PF10566_consen 71 PDFDLPELVDYAKEKGV-GIWLWYHSETGGNVANLEKQLDEAFKLYAKWGVKGVKI 125 (273)
T ss_dssp TT--HHHHHHHHHHTT--EEEEEEECCHTTBHHHHHCCHHHHHHHHHHCTEEEEEE
T ss_pred CccCHHHHHHHHHHcCC-CEEEEEeCCcchhhHhHHHHHHHHHHHHHHcCCCEEee
Confidence 33668889999999887 4566655554 56778889998765553
No 212
>PRK14833 undecaprenyl pyrophosphate synthase; Provisional
Probab=20.97 E-value=1.4e+02 Score=23.26 Aligned_cols=34 Identities=3% Similarity=-0.083 Sum_probs=29.5
Q ss_pred cCcccccHHHHHHHHHHHHHHhcCCCeEEEEeec
Q 026808 151 EKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDF 184 (233)
Q Consensus 151 p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~ 184 (233)
|...|+--|-.-+..++++|.+.|++.+.+.+.+
T Consensus 25 ~~~~GH~~G~~~l~~~~~~c~~~gI~~lTvyaFS 58 (233)
T PRK14833 25 ARAAGHKKGVKTLREITIWCANHKLECLTLYAFS 58 (233)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHcCCCEEEEeecc
Confidence 4556888899999999999999999999998754
No 213
>PRK05031 tRNA (uracil-5-)-methyltransferase; Validated
Probab=20.96 E-value=2.2e+02 Score=23.74 Aligned_cols=60 Identities=15% Similarity=0.186 Sum_probs=41.1
Q ss_pred EEEEEccCcccccHHHHHHHHHHHHHHhcCCCeEEEEeecCCh-hhHHHHHhCCCEEEecCCCCCCCCC
Q 026808 145 SNVAVREKFRRKGIAKRLIAKAEAQARGWGCRSIALHCDFNNL-GATKLYKGQGFKCVKVPEGANWPQP 212 (233)
Q Consensus 145 ~~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~n~-~a~~~y~k~Gf~~~~~~~~~~~~~~ 212 (233)
+.+.++|-+ .|+...+++.+.+ . -.-+++.|++... +-.+.+.+ ||+.......-.+++.
T Consensus 290 D~v~lDPPR--~G~~~~~l~~l~~-~----~~ivyvSC~p~tlarDl~~L~~-gY~l~~v~~~DmFPqT 350 (362)
T PRK05031 290 STIFVDPPR--AGLDDETLKLVQA-Y----ERILYISCNPETLCENLETLSQ-THKVERFALFDQFPYT 350 (362)
T ss_pred CEEEECCCC--CCCcHHHHHHHHc-c----CCEEEEEeCHHHHHHHHHHHcC-CcEEEEEEEcccCCCC
Confidence 568999994 7899999888876 1 2358888887432 22455555 9998887655555444
No 214
>PRK14019 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional
Probab=20.95 E-value=1.6e+02 Score=24.77 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=25.1
Q ss_pred HHHHhcCCCeEEEEeecCChhhHHHHHhCCCEEEecCC
Q 026808 168 AQARGWGCRSIALHCDFNNLGATKLYKGQGFKCVKVPE 205 (233)
Q Consensus 168 ~~a~~~g~~~i~l~~~~~n~~a~~~y~k~Gf~~~~~~~ 205 (233)
+..+..|+..+.|.+ |+.-+.-.+.+|.+++++.+
T Consensus 329 qIL~~Lgv~~irLlT---np~K~~~L~~~Gi~V~~~~~ 363 (367)
T PRK14019 329 QILRDLGVGKMRLLS---SPRKFPSMSGFGLEVTGYVP 363 (367)
T ss_pred HHHHHcCCCeEEECC---CcHHHHhhhhCCcEEEEEec
Confidence 344556888888865 46667777888999887653
Done!