BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026809
(233 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81788|WOX13_ARATH WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana GN=WOX13 PE=2
SV=1
Length = 268
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 144/238 (60%), Gaps = 35/238 (14%)
Query: 29 LCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQ 88
+ VKVMTDEQ E LRKQIA+Y ICE+LV+MHK +AQ ++AG RMG Y DP ++S
Sbjct: 33 MYVKVMTDEQYETLRKQIAIYGTICERLVEMHKTLTAQQDLAGGRMGGLYADPMMSSLGH 92
Query: 89 KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 148
K+TARQRWTPTP QLQILE ++D+ GTP KQKI+D+T EL++HGQI+E NVYNWFQNRR
Sbjct: 93 KMTARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRR 152
Query: 149 ARLKRKQ-------SGVVPNNAESEAETVTHAESRKQNPESIQSLEDS------------ 189
AR KRKQ + + E+E E + E R PES+ L D
Sbjct: 153 ARSKRKQHGGGSSGNNNGESEVETEVEALN--EKRVVRPESLLGLPDGNSNNNGLGTTTA 210
Query: 190 -APPPRDEDIYPQSPDLGID-------------QMIGKMEIPGSFSFHWQVDRYDMLG 233
PR ED+ QSP++ D ++GKM + S++ + V+ Y M G
Sbjct: 211 TTTAPRPEDLCFQSPEISSDLHLLDVLSNPRDEHLVGKMGLAESYNLYDHVEDYGMSG 268
>sp|Q5QMM3|WOX8_ORYSJ WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica GN=WOX8
PE=2 SV=1
Length = 267
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 114/133 (85%), Gaps = 2/133 (1%)
Query: 31 VKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQ-NEIAGMRMGNPYFDPFVASGSQK 89
VKVMTDEQME+LRKQI++YA ICEQLV+MH+ +AQ + IAGMR+GN Y DP + G K
Sbjct: 27 VKVMTDEQMEVLRKQISIYATICEQLVEMHRALTAQQDSIAGMRLGNLYCDPLMVPGGHK 86
Query: 90 LTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 149
+TARQRWTPTP QLQILE+++D+ GTP KQKI+D+TAEL++HGQISETNVYNWFQNRRA
Sbjct: 87 ITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRA 146
Query: 150 RLKRKQSGVVPNN 162
R KRKQ+ +PNN
Sbjct: 147 RSKRKQAA-LPNN 158
>sp|Q9LM84|WOX14_ARATH WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana GN=WOX14 PE=2
SV=1
Length = 211
Score = 175 bits (443), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/188 (50%), Positives = 124/188 (65%), Gaps = 13/188 (6%)
Query: 32 KVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIA-GMR-MGNPYFDPFVASGS-Q 88
+VMT+EQME+LRKQIAVYA+IC+QLV +H S+ + ++ G+R M YFDP AS S
Sbjct: 29 RVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGASSSSH 88
Query: 89 KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 148
+++ R RWTPT QLQILE +YDE GTP +++I+++ EL++HGQI+ETNVYNWFQNRR
Sbjct: 89 RISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRR 148
Query: 149 ARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQSPDLGID 208
AR KRKQ N +++ VT E R S DS E I SPDLGI+
Sbjct: 149 ARSKRKQPQTTTANGQADDVAVTTEERR--------SCGDSGGLESYEHILFPSPDLGIE 200
Query: 209 QM--IGKM 214
+ IGK
Sbjct: 201 HLLSIGKF 208
>sp|Q9LM83|WOX10_ARATH Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana
GN=WOX10 PE=3 SV=1
Length = 197
Score = 138 bits (347), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 119/188 (63%), Gaps = 14/188 (7%)
Query: 32 KVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIA-GMR-MGNPYFDPFVASGS-Q 88
+VMTDEQME LRKQIA+YA++C+QLV +H S+ ++ GM M YFDP VAS S
Sbjct: 13 RVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAH 72
Query: 89 KLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 148
++ R RWTPT QLQILE++Y E GTP ++I+++T EL++HGQI E NVY+WFQNRR
Sbjct: 73 GMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRR 132
Query: 149 ARLKRKQ---SGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQSPDL 205
AR KRKQ + + + A+ A T T R +DS E I SPDL
Sbjct: 133 ARSKRKQPPTTTITSSQADDAAVTTTEERGR--------CGDDSGGFESYEHILFPSPDL 184
Query: 206 GIDQMIGK 213
GI+ ++ +
Sbjct: 185 GIEHLLNR 192
>sp|Q9SIB4|WOX3_ARATH WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana GN=WOX3 PE=2
SV=1
Length = 244
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 91 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 150
A RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR
Sbjct: 4 VASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKAR 63
Query: 151 LKRK 154
++K
Sbjct: 64 DRQK 67
>sp|Q6X7K0|WOX1_ARATH WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana GN=WOX1 PE=2
SV=2
Length = 350
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 154
RW PTP QL++LE +Y + TP IQ +TA+L ++G+I NV+ WFQN +AR ++K
Sbjct: 76 RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135
Query: 155 Q 155
+
Sbjct: 136 R 136
>sp|Q6X7J5|WOX8_ARATH WUSCHEL-related homeobox 8 OS=Arabidopsis thaliana GN=WOX8 PE=2
SV=1
Length = 325
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 93 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 152
+ RW P P Q++ILE +++ P +++IQ + L ++GQI + NV+ WFQNR++R K
Sbjct: 53 KPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAK 112
Query: 153 RK 154
K
Sbjct: 113 HK 114
>sp|Q6X7J4|WOX9_ARATH WUSCHEL-related homeobox 9 OS=Arabidopsis thaliana GN=WOX9 PE=2
SV=1
Length = 378
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%)
Query: 93 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 152
+ RW P P Q++ILE +++ P +++I+ + A+L ++GQ+ + NV+ WFQNR++R K
Sbjct: 53 KPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSK 112
Query: 153 RK 154
K
Sbjct: 113 HK 114
>sp|Q5W7C3|WOX2_ORYSJ Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica
GN=WOX2 PE=3 SV=1
Length = 286
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 154
RW PTP QL +LE +Y TP +IQ +TA L+ +G+I NV+ WFQN +AR ++K
Sbjct: 27 RWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQK 86
>sp|A2XZR3|WOX2_ORYSI Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica
GN=WOX2 PE=3 SV=1
Length = 286
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 154
RW PTP QL +LE +Y TP +IQ +TA L+ +G+I NV+ WFQN +AR ++K
Sbjct: 27 RWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQK 86
>sp|Q6X7K1|WOX2_ARATH WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana GN=WOX2 PE=2
SV=1
Length = 260
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 154
RW PT Q+ +LE++Y E TP +IQ +T L +G I NV+ WFQN +AR ++K
Sbjct: 14 RWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQK 73
Query: 155 Q 155
Q
Sbjct: 74 Q 74
>sp|Q70UV1|WOX3A_MAIZE WUSCHEL-related homeobox 3A OS=Zea mays GN=WOX3A PE=2 SV=1
Length = 262
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 91 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 148
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>sp|Q0JKK6|WOX7_ORYSJ WUSCHEL-related homeobox 7 OS=Oryza sativa subsp. japonica GN=WOX7
PE=2 SV=2
Length = 533
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 80 DPFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISET 138
PF + G +++ + RW P P Q++ILE +++ P + +I + +L ++GQ+ +
Sbjct: 53 SPFSSVGEERVPDPKPRWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDA 112
Query: 139 NVYNWFQNRRARLKRK 154
NV+ WFQNR++R K K
Sbjct: 113 NVFYWFQNRKSRSKNK 128
>sp|Q6S3I3|WOX3B_MAIZE WUSCHEL-related homeobox 3B OS=Zea mays GN=WOX3B PE=2 SV=1
Length = 265
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 91 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 148
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>sp|Q6X7J9|WOX4_ARATH WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana GN=WOX4 PE=2
SV=1
Length = 251
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 154
RW PT Q+ ILE +Y TP Q+I+ +T +L K+G+I NV+ WFQN +AR ++K
Sbjct: 90 RWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQK 149
Query: 155 Q 155
Q
Sbjct: 150 Q 150
>sp|A3B6V0|WOX12_ORYSJ WUSCHEL-related homeobox 12 OS=Oryza sativa subsp. japonica
GN=WOX12 PE=2 SV=2
Length = 515
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%)
Query: 86 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQ 145
G++ + RW P P Q++ILE +++ P + +I+ + +L ++GQ+ + NV+ WFQ
Sbjct: 63 GTRNPEPKPRWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGQVGDANVFYWFQ 122
Query: 146 NRRARLKRK 154
NR++R K K
Sbjct: 123 NRKSRTKNK 131
>sp|Q33DK1|WOX3_ORYSJ WUSCHEL-related homeobox 3 OS=Oryza sativa subsp. japonica GN=WOX3
PE=1 SV=1
Length = 203
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 91 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 148
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>sp|A2ZH47|WOX3_ORYSI WUSCHEL-related homeobox 3 OS=Oryza sativa subsp. indica GN=WOX3
PE=3 SV=1
Length = 203
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 91 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRR 148
T RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +
Sbjct: 4 TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>sp|Q8LR86|WOX5_ORYSJ WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica GN=WOX5
PE=2 SV=1
Length = 313
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 149
RWTPT Q+ +LE +Y + TP ++IQ +TA L +HG I NV+ WFQN +A
Sbjct: 44 RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKA 98
>sp|A2WWU7|WOX5_ORYSI WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica GN=WOX5
PE=3 SV=1
Length = 313
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 149
RWTPT Q+ +LE +Y + TP ++IQ +TA L +HG I NV+ WFQN +A
Sbjct: 44 RWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKA 98
>sp|Q7XTV3|WOX4_ORYSJ WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica GN=WOX4
PE=2 SV=2
Length = 236
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 154
RW P+ Q+++LE +Y TP +I+ +T EL K+G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQK 151
Query: 155 Q 155
Q
Sbjct: 152 Q 152
>sp|Q25AM2|WOX4_ORYSI WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica GN=WOX4
PE=3 SV=1
Length = 236
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 154
RW P+ Q+++LE +Y TP +I+ +T EL K+G+I NV+ WFQN +AR ++K
Sbjct: 92 RWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQK 151
Query: 155 Q 155
Q
Sbjct: 152 Q 152
>sp|Q6YBV1|WUS_ANTMA Protein WUSCHEL OS=Antirrhinum majus GN=WUS PE=2 SV=1
Length = 281
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 84 ASGSQKLTARQ---RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETN 139
SG RQ RWTPT Q++IL+ +Y + +P ++IQ ++A+L ++G+I N
Sbjct: 26 GSGGSSFLCRQSSTRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKN 85
Query: 140 VYNWFQNRRARLKRKQ 155
V+ WFQN +AR ++K+
Sbjct: 86 VFYWFQNHKARERQKK 101
>sp|Q7XM13|WOX1A_ORYSJ WUSCHEL-related homeobox 1A OS=Oryza sativa subsp. japonica
GN=WOX1A PE=2 SV=2
Length = 289
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 95 RWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 153
RWTPT Q++IL +Y C +P ++IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 35 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 94
Query: 154 KQ 155
K+
Sbjct: 95 KK 96
>sp|Q33DK0|WOX1B_ORYSJ WUSCHEL-related homeobox 1B OS=Oryza sativa subsp. japonica
GN=WOX1B PE=1 SV=2
Length = 289
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 95 RWTPTPAQLQILEHVYDECK-GTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 153
RWTPT Q++IL +Y C +P ++IQ + A L ++G+I NV+ WFQN +AR ++
Sbjct: 35 RWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQ 94
Query: 154 KQ 155
K+
Sbjct: 95 KK 96
>sp|Q9ZVF5|WOX6_ARATH WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana GN=WOX6 PE=2
SV=2
Length = 271
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 92 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRA 149
A RW PTP Q+ LE +Y TP ++IQ + ++L K+G+I NV+ WFQN +A
Sbjct: 58 ATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKA 115
>sp|Q8H1D2|WOX5_ARATH WUSCHEL-related homeobox 5 OS=Arabidopsis thaliana GN=WOX5 PE=2
SV=1
Length = 182
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 154
RW PT QL+IL ++ TP +IQ ++ EL+ +G+I NV+ WFQN +AR ++K
Sbjct: 24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 83
Query: 155 QSGV 158
+ +
Sbjct: 84 RRKI 87
>sp|Q9SB92|WUS_ARATH Protein WUSCHEL OS=Arabidopsis thaliana GN=WUS PE=1 SV=2
Length = 292
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 91 TARQ---RWTPTPAQLQIL-EHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 146
T RQ RWTPT Q++IL E Y+ +P +IQ +TA L + G+I NV+ WFQN
Sbjct: 31 TCRQTSTRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQN 90
Query: 147 RRARLKRKQ 155
+AR ++K+
Sbjct: 91 HKARERQKK 99
>sp|A3BKM2|WOX13_ORYSJ WUSCHEL-related homeobox 13 OS=Oryza sativa subsp. japonica
GN=WOX13 PE=2 SV=1
Length = 306
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 71 GMRMGNPYFD----PFVASGSQKLT-ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDM 125
G R G F PF + G +++ + R P P Q++ILE +++ P + +I +
Sbjct: 107 GHRTGGGGFSLKSSPFSSVGEERVPDPKPRRNPRPEQIRILEAIFNSGMVNPPRDEIPRI 166
Query: 126 TAELAKHGQISETNVYNWFQNRRARLKRK 154
+L ++GQ+ + NV+ WFQNR++R K K
Sbjct: 167 RMQLQEYGQVGDANVFYWFQNRKSRSKNK 195
>sp|Q84VT7|WUS_SOLLC Protein WUSCHEL OS=Solanum lycopersicum GN=WUS PE=2 SV=1
Length = 272
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 92 ARQRWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR 150
+ RWTPT Q++IL+ +Y + +P ++IQ ++A+L ++G+I NV+ WFQN +AR
Sbjct: 23 SSSRWTPTSDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKAR 82
Query: 151 LKRKQ-----SGVVPNNAESEAETVTH 172
++K+ + NN S + + H
Sbjct: 83 ERQKKRLIAAASATDNNNISSMQMIPH 109
>sp|Q8LL11|WUS_PETHY Protein WUSCHEL OS=Petunia hybrida GN=WUS PE=2 SV=1
Length = 307
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 95 RWTPTPAQLQILEHVY-DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 153
RWTPT Q++IL+ +Y + +P ++IQ ++A+L ++G+I NV+ WFQN +AR ++
Sbjct: 47 RWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQ 106
Query: 154 KQ 155
K+
Sbjct: 107 KK 108
>sp|Q9FFK0|WOX7_ARATH WUSCHEL-related homeobox 7 OS=Arabidopsis thaliana GN=WOX7 PE=2
SV=1
Length = 122
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 154
RW PT Q+++L ++ TP +IQ ++ EL+ +G+I NV+ WFQN +AR ++K
Sbjct: 29 RWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWFQNHKARERQK 88
>sp|Q8W0F1|WOX9_ORYSJ WUSCHEL-related homeobox 9 OS=Oryza sativa subsp. japonica GN=WOX9
PE=2 SV=1
Length = 200
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 95 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRAR---- 150
RW PT Q+++L ++ TP ++IQ ++ L+ G++ NV+ WFQN +AR
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARERHH 73
Query: 151 -LKRKQSGVVPNNAESE 166
KR++ P++ ++
Sbjct: 74 HKKRRRGASSPDSGSND 90
>sp|A2XG77|WOX6_ORYSI WUSCHEL-related homeobox 6 OS=Oryza sativa subsp. indica GN=WOX6
PE=2 SV=1
Length = 328
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 92 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 146
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 39 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 93
>sp|Q10M29|WOX6_ORYSJ WUSCHEL-related homeobox 6 OS=Oryza sativa subsp. japonica GN=WOX6
PE=2 SV=1
Length = 328
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 92 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 146
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 39 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 93
>sp|Q0D3I7|WOX11_ORYSJ WUSCHEL-related homeobox 11 OS=Oryza sativa subsp. japonica
GN=WOX11 PE=2 SV=1
Length = 262
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 93 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 146
R RWTP P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 20 RSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 73
>sp|Q6X7J3|WOX11_ARATH WUSCHEL-related homeobox 11 OS=Arabidopsis thaliana GN=WOX11 PE=2
SV=2
Length = 268
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 81 PFVASGSQKL-TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETN 139
P ASGS R RW+P P Q+ ILE ++ P K++ + L K G + + N
Sbjct: 18 PSSASGSTSAEPVRSRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDAN 77
Query: 140 VYNWFQN 146
V+ WFQN
Sbjct: 78 VFYWFQN 84
>sp|A2YST1|WOX10_ORYSI WUSCHEL-related homeobox 10 OS=Oryza sativa subsp. indica GN=WOX10
PE=2 SV=1
Length = 284
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 92 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 146
AR RW P P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 40 ARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQN 94
>sp|Q6Z3L4|WOX10_ORYSJ WUSCHEL-related homeobox 10 OS=Oryza sativa subsp. japonica
GN=WOX10 PE=2 SV=1
Length = 284
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 92 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 146
AR RW P P Q+ ILE +++ P K + + L + G + + NV+ WFQN
Sbjct: 40 ARSRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQN 94
>sp|Q8GY25|WOX12_ARATH WUSCHEL-related homeobox 12 OS=Arabidopsis thaliana GN=WOX12 PE=2
SV=1
Length = 268
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 92 ARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQN 146
R RW+P P Q+ ILE +++ P K + + L K G + + NV+ WFQN
Sbjct: 18 VRARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQN 72
>sp|Q91898|HESXB_XENLA Homeobox expressed in ES cells 1-B OS=Xenopus laevis GN=hesx1-b
PE=1 SV=2
Length = 187
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 15/115 (13%)
Query: 45 QIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLT----ARQRWTPTP 100
QI V A C+ +Q+H V ++ E +R+ + D + ++L+ R R T
Sbjct: 62 QIPVIA--CDLPIQVHAVHRSEEEETKIRLEKCFGDEDRLTYKRELSWYRGRRPRTAFTR 119
Query: 101 AQLQILEHVY--DECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKR 153
+Q++ILE+V+ + G D+ ELA + E + WFQNRRA+LKR
Sbjct: 120 SQIEILENVFRVNSYPGI-------DVREELASKLALDEDRIQIWFQNRRAKLKR 167
>sp|Q91926|VENT1_XENLA Homeobox protein vent1 OS=Xenopus laevis GN=vent1 PE=1 SV=1
Length = 264
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 13/77 (16%)
Query: 90 LTARQRWTPTPAQLQILEHVYDECK--GTPRKQKIQDMTAELAKHGQISETNVYNWFQNR 147
L R R TP Q+ LE +++ + G P ++K LA Q+SE V WFQNR
Sbjct: 128 LQRRLRTAFTPQQISKLEQAFNKQRYLGAPERKK-------LATSLQLSEIQVKTWFQNR 180
Query: 148 RARLKR----KQSGVVP 160
R +LKR KQ +VP
Sbjct: 181 RMKLKRQIQDKQHSLVP 197
>sp|P15142|HM7X_CHICK Homeobox protein CHOX-7 (Fragment) OS=Gallus gallus GN=CHOX-7 PE=4
SV=1
Length = 124
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 13/117 (11%)
Query: 81 PFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMT--AELAKHGQISET 138
P SG+ K + R+R T QL LE + CK K +T +++A ++SE
Sbjct: 15 PPPGSGAGK-SRRRRTAFTSEQLLELEKEF-HCK------KYLSLTERSQIAHALKLSEV 66
Query: 139 NVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRD 195
V WFQNRRA+ KR ++G V N + E V + + + +P + QSL + P P D
Sbjct: 67 QVKIWFQNRRAKWKRIKAGNVSNRS---GEPVRNPKIVRAHPGARQSLRRAQPAPAD 120
>sp|Q91685|MIX2_XENLA Homeobox protein Mix.2 OS=Xenopus laevis GN=mix-b PE=2 SV=1
Length = 369
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 76 NPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQI 135
NP D + S SQ+ R+R T AQL ILE + + P + ELA+H I
Sbjct: 82 NPEPDSSLVSASQR---RKRTFFTQAQLDILEQFF-QTNMYPDIHHRE----ELARHIYI 133
Query: 136 SETNVYNWFQNRRARLKRK 154
E+ + WFQNRRA+++R+
Sbjct: 134 PESRIQVWFQNRRAKVRRQ 152
>sp|Q9JLZ9|VAX2_RAT Ventral anterior homeobox 2 OS=Rattus norvegicus GN=Vax2 PE=2 SV=1
Length = 292
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 93 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLK 152
R R + T QL LE + C+ +++ ELA+ +SET V WFQNRR + K
Sbjct: 104 RTRTSFTAEQLYRLEMEFQRCQYVVGRERT-----ELARQLNLSETQVKVWFQNRRTKQK 158
Query: 153 RKQSGVVPNNAESEA 167
+ QS + A S A
Sbjct: 159 KDQSRDLEKRASSSA 173
>sp|Q7Y0V7|ROC6_ORYSJ Homeobox-leucine zipper protein ROC6 OS=Oryza sativa subsp.
japonica GN=ROC6 PE=2 SV=2
Length = 872
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 99 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 155
TP Q+Q LE V+ EC KQ++ EL++ + V WFQNRR ++K+ Q
Sbjct: 130 TPQQIQELEAVFKECPHPDEKQRM-----ELSRRLNLESRQVKFWFQNRRTQMKQTQ 181
>sp|A3BYC1|HOX25_ORYSJ Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp.
japonica GN=HOX25 PE=2 SV=2
Length = 320
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 86 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQ-DMTAELAKHGQISETNVYNWF 144
GS AR+R T Q++ LE ++E K+K++ + +ELA+ I+ V WF
Sbjct: 75 GSSSAAARKRRL-TAEQVRALERSFEE-----EKRKLEPERKSELARRLGIAPRQVAVWF 128
Query: 145 QNRRARLKRKQ 155
QNRRAR K KQ
Sbjct: 129 QNRRARWKTKQ 139
>sp|A2Z0Q0|HOX25_ORYSI Homeobox-leucine zipper protein HOX25 OS=Oryza sativa subsp. indica
GN=HOX25 PE=2 SV=1
Length = 260
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 86 GSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQ-DMTAELAKHGQISETNVYNWF 144
GS AR+R T Q++ LE ++E K+K++ + +ELA+ I+ V WF
Sbjct: 15 GSSSAAARKRRL-TAEQVRALERSFEE-----EKRKLEPERKSELARRLGIAPRQVAVWF 68
Query: 145 QNRRARLKRKQ 155
QNRRAR K KQ
Sbjct: 69 QNRRARWKTKQ 79
>sp|Q2QM96|HOX33_ORYSJ Homeobox-leucine zipper protein HOX33 OS=Oryza sativa subsp.
japonica GN=HOX33 PE=2 SV=1
Length = 855
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 99 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 155
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 34 TPEQVEALERVYTECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 89
>sp|A2ZMN9|HOX33_ORYSI Homeobox-leucine zipper protein HOX33 OS=Oryza sativa subsp. indica
GN=HOX33 PE=2 SV=2
Length = 855
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 99 TPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 155
TP Q++ LE VY EC P + Q + E I + WFQNRR R K+++
Sbjct: 34 TPEQVEALERVYTECP-KPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRK 89
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,135,410
Number of Sequences: 539616
Number of extensions: 3517455
Number of successful extensions: 12179
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 417
Number of HSP's that attempted gapping in prelim test: 11790
Number of HSP's gapped (non-prelim): 728
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)