Query 026816
Match_columns 232
No_of_seqs 135 out of 1141
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 22:53:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026816.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026816hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3op6_A Uncharacterized protein 100.0 2.3E-34 7.9E-39 235.1 17.9 150 51-231 2-152 (152)
2 2z0x_A Putative uncharacterize 100.0 2.3E-33 8E-38 229.6 19.9 153 49-232 3-156 (158)
3 1wdv_A Hypothetical protein AP 100.0 1E-32 3.6E-37 223.6 17.6 150 53-232 2-151 (152)
4 1dbu_A HI1434, cysteinyl-tRNA( 100.0 4.8E-31 1.6E-35 215.6 18.3 153 55-232 3-156 (158)
5 2dxa_A Protein YBAK; trans-edi 100.0 1.4E-30 4.7E-35 215.2 16.8 156 52-232 7-163 (166)
6 1vki_A Hypothetical protein AT 100.0 7.7E-31 2.6E-35 220.5 14.9 155 49-232 17-180 (181)
7 1vjf_A DNA-binding protein, pu 100.0 1.2E-30 4E-35 219.2 13.8 152 51-232 14-174 (180)
8 3mem_A Putative signal transdu 99.9 9.9E-26 3.4E-30 212.9 12.9 133 53-231 5-141 (457)
9 2j3l_A Prolyl-tRNA synthetase; 99.2 7E-10 2.4E-14 106.7 17.4 102 80-208 261-362 (572)
10 3swy_A Cyclic nucleotide-gated 51.8 12 0.00042 24.2 2.9 23 4-26 24-46 (46)
11 3swf_A CGMP-gated cation chann 40.9 21 0.00073 25.4 3.0 26 4-29 26-51 (74)
12 3fz4_A Putative arsenate reduc 32.3 49 0.0017 24.7 4.1 41 51-92 14-55 (120)
13 2pnv_A Small conductance calci 32.2 38 0.0013 21.5 2.8 26 3-28 9-34 (43)
14 3gkx_A Putative ARSC family re 30.9 68 0.0023 23.9 4.7 45 51-97 15-60 (120)
15 3l78_A Regulatory protein SPX; 30.6 74 0.0025 23.6 4.9 36 51-89 11-46 (120)
16 1aba_A Glutaredoxin; electron 29.7 93 0.0032 20.9 5.0 23 51-74 15-37 (87)
17 2lqo_A Putative glutaredoxin R 28.8 80 0.0027 22.4 4.6 24 52-76 16-39 (92)
18 1u6t_A SH3 domain-binding glut 28.4 83 0.0028 23.9 4.8 22 53-75 19-40 (121)
19 3vmx_A Voltage-gated hydrogen 27.2 1.2E+02 0.0041 19.7 4.6 44 2-65 3-46 (48)
20 1s3c_A Arsenate reductase; ARS 26.8 70 0.0024 24.6 4.2 44 51-96 13-57 (141)
21 1z3e_A Regulatory protein SPX; 25.8 1.3E+02 0.0045 22.3 5.6 36 51-89 12-47 (132)
22 3rdw_A Putative arsenate reduc 25.0 76 0.0026 23.6 4.0 38 51-91 16-56 (121)
23 1t1v_A SH3BGRL3, SH3 domain-bi 22.3 1.4E+02 0.0047 20.4 4.7 22 54-76 22-43 (93)
24 2ct6_A SH3 domain-binding glut 21.4 1.2E+02 0.0042 21.7 4.5 21 54-75 28-48 (111)
No 1
>3op6_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 2.00A {Legionella pneumophila subsp}
Probab=100.00 E-value=2.3e-34 Score=235.09 Aligned_cols=150 Identities=17% Similarity=0.226 Sum_probs=134.5
Q ss_pred hHHHHHHHHHHHCCCCceeEEEcCCCCCCccHHHHHHHhCCCCccceEEEEEEEecccCCccccccCCCCCeEEEEEEec
Q 026816 51 DTEARLSNILRSNGVNDFQFKKVPSDYYDWPLESRRDVLAAACIHHLCKSIVLVNTQAQSSVVDCSDRNNSKYYVVVVQY 130 (232)
Q Consensus 51 ~~~~rv~~~L~~~gi~~~~~~~~p~~y~~~tle~aA~~lg~~s~~~l~KSlvl~n~~~~~~~~~~~d~~~~~y~lvVv~~ 130 (232)
|+.+++.++|+++|| +|+...||+. .|.+++|+.+|++ +++++|||+++++ ++||++|+|+
T Consensus 2 M~~~~v~~~L~~~~i-~~~~~~~~~~---~t~~~~a~~lg~~-~~~~~Ktlv~~~~--------------~~~~lvvv~g 62 (152)
T 3op6_A 2 MPVKKLKQFLDSHKI-KYLSIAHSPA---YTAQEIAASAHVS-GKQLAKTVIIKMD--------------GRLAMVVLPA 62 (152)
T ss_dssp CHHHHHHHHHHHTTC-CEEEEEECTT---CCHHHHC----CC-SSCCEEEEEEEET--------------TEEEEEEEET
T ss_pred CcHHHHHHHHHHcCC-ceEEEEcCCC---CCHHHHHHHcCCC-hhheEEEEEEEEC--------------CeEEEEEECC
Confidence 567899999999999 8999999864 5899999999998 9999999999963 4799999999
Q ss_pred CCccCHHHHHHHhhhccCCCCCCcccccccCCHhhHhhh-hCCCCCcccCCCcccCccEEEchhhhccCCCeEEEccCCC
Q 026816 131 TARFNAEAVKNFLYTLNNGKIPKKKFNLRLAPEETSMNL-TGYEHNAVTCIGMKTDIPVILDEAITKLSPDFFWLGGGET 209 (232)
Q Consensus 131 ~~rld~kkl~~~l~~l~~~~lg~k~~~lrlA~~ee~~~l-TGy~~GgVsPfG~~~~ipviiD~~l~~l~~~~v~~ggG~~ 209 (232)
++++|++|+++.++. | +++||+++++.+. |||++|+|||||+++++|+|+|+++.++ +.||++||++
T Consensus 63 d~~ld~~kl~~~lg~--------~--~~~~a~~e~l~~~~tG~~~G~v~P~g~~~~~~v~~D~~l~~~--~~i~~~ag~~ 130 (152)
T 3op6_A 63 SDHITFMKLKEAIGT--------S--DLELATESEFEGKFAECDVGAMPPFGNLYGLPVLVSTKLSAQ--DNILFNAGSH 130 (152)
T ss_dssp TCCCCHHHHHHHHSC--------S--CEEECCGGGTGGGCTTSCTTCCCSCGGGGTCCEEEEHHHHTS--SEEEEECSSS
T ss_pred CCeECHHHHHHHhCC--------C--ceeeCCHHHHHHHhcCCCcCCCCCCCCCcCCeEEEehhhccC--CeEEEeCCCC
Confidence 999999999999753 4 3999999999877 8999999999999999999999999986 9999999999
Q ss_pred CceEeeCHHHHHhhhCCeEeec
Q 026816 210 DLKWGIKTSEFIKFVKPFIVGC 231 (232)
Q Consensus 210 ~~~l~is~~dl~~l~~~~v~di 231 (232)
+..+.|+++||+++++|.++|+
T Consensus 131 ~~~i~l~~~dl~~~~~~~~~d~ 152 (152)
T 3op6_A 131 SELMQLSFGDFEKLVKPTLVTL 152 (152)
T ss_dssp SEEEEEEHHHHHHHHCCEEECC
T ss_pred CcEEEECHHHHHHHhcCeecCC
Confidence 9999999999999999999986
No 2
>2z0x_A Putative uncharacterized protein TTHA1699; protein-cyssa complex, translation, structural genomics, NPPSFA; HET: 5CA; 1.64A {Thermus thermophilus} PDB: 2z0k_A* 2cx5_A* 3rij_A 3ri0_A
Probab=100.00 E-value=2.3e-33 Score=229.58 Aligned_cols=153 Identities=20% Similarity=0.358 Sum_probs=140.8
Q ss_pred CChHHHHHHHHHHHCCCCce-eEEEcCCCCCCccHHHHHHHhCCCCccceEEEEEEEecccCCccccccCCCCCeEEEEE
Q 026816 49 IRDTEARLSNILRSNGVNDF-QFKKVPSDYYDWPLESRRDVLAAACIHHLCKSIVLVNTQAQSSVVDCSDRNNSKYYVVV 127 (232)
Q Consensus 49 ~~~~~~rv~~~L~~~gi~~~-~~~~~p~~y~~~tle~aA~~lg~~s~~~l~KSlvl~n~~~~~~~~~~~d~~~~~y~lvV 127 (232)
+++..+++.++|+++|| +| +.+.+|++ ..|.+++|+.+|++ +++++|||+++++ ++||++|
T Consensus 3 ~~m~~~~~~~~L~~~~i-~~~~~~~~p~~--~~t~~e~a~~lg~~-~~~~~Ktlv~~~~--------------~~~~lvv 64 (158)
T 2z0x_A 3 LSPSARRVQGALETRGF-GHLKVVELPAS--TRTAKEAAQAVGAE-VGQIVKSLVFVGE--------------KGAYLFL 64 (158)
T ss_dssp CCHHHHHHHHHHHHTTC-TTSCEEECSSC--CSSHHHHHHHHTCC-GGGEEEEEEEEES--------------SSEEEEE
T ss_pred cchhHHHHHHHHHHcCC-CCCEEEEcCCC--CCCHHHHHHHcCCC-HHHEEEEEEEEeC--------------CcEEEEE
Confidence 35777999999999999 88 99999863 45899999999997 9999999999962 4699999
Q ss_pred EecCCccCHHHHHHHhhhccCCCCCCcccccccCCHhhHhhhhCCCCCcccCCCcccCccEEEchhhhccCCCeEEEccC
Q 026816 128 VQYTARFNAEAVKNFLYTLNNGKIPKKKFNLRLAPEETSMNLTGYEHNAVTCIGMKTDIPVILDEAITKLSPDFFWLGGG 207 (232)
Q Consensus 128 v~~~~rld~kkl~~~l~~l~~~~lg~k~~~lrlA~~ee~~~lTGy~~GgVsPfG~~~~ipviiD~~l~~l~~~~v~~ggG 207 (232)
+|+++++|++|+++.++. | ++||+++++.++|||++|+|+|||+++++|+|+|+++.++ +.||+|||
T Consensus 65 v~gd~~ld~~kl~~~lg~--------~---l~~a~~e~~~~~tG~~~G~v~P~gl~~~v~v~iD~~l~~~--~~i~~~ag 131 (158)
T 2z0x_A 65 VSGKNRLDLGKATRLVGG--------P---LRQATPEEVRELTGFAIGGVPPVGHNTPLPAYLDEDLLGY--PEVWAAGG 131 (158)
T ss_dssp EETTCCBCHHHHHHHHTS--------C---EEECCHHHHHHHHSSCTTSCCSSCCSSCCCEEEEGGGGGS--SCEEEECS
T ss_pred EECchhhCHHHHHHHhCC--------C---cEECCHHHHHHHhCCCCccCCcCCCCCCCcEEEEhHHhcC--CcEEEECC
Confidence 999999999999998743 2 8999999999999999999999999999999999999986 89999999
Q ss_pred CCCceEeeCHHHHHhhhCCeEeecC
Q 026816 208 ETDLKWGIKTSEFIKFVKPFIVGCS 232 (232)
Q Consensus 208 ~~~~~l~is~~dl~~l~~~~v~di~ 232 (232)
+.+..+.++++||++++++.++||+
T Consensus 132 ~~~~~i~l~~~dl~~~~~~~~~di~ 156 (158)
T 2z0x_A 132 TPRALFRATPKELLALTGAQVADLK 156 (158)
T ss_dssp STTEEEEECHHHHHHHHCCEEECCB
T ss_pred CCCEEEEECHHHHHHHhCCEEEEee
Confidence 9999999999999999999999985
No 3
>1wdv_A Hypothetical protein APE2540; structural genomics, unknown function, riken structural genomics/proteomics initiative, RSGI; 1.70A {Aeropyrum pernix} SCOP: d.116.1.1
Probab=100.00 E-value=1e-32 Score=223.65 Aligned_cols=150 Identities=17% Similarity=0.349 Sum_probs=137.4
Q ss_pred HHHHHHHHHHCCCCceeEEEcCCCCCCccHHHHHHHhCCCCccceEEEEEEEecccCCccccccCCCCCeEEEEEEecCC
Q 026816 53 EARLSNILRSNGVNDFQFKKVPSDYYDWPLESRRDVLAAACIHHLCKSIVLVNTQAQSSVVDCSDRNNSKYYVVVVQYTA 132 (232)
Q Consensus 53 ~~rv~~~L~~~gi~~~~~~~~p~~y~~~tle~aA~~lg~~s~~~l~KSlvl~n~~~~~~~~~~~d~~~~~y~lvVv~~~~ 132 (232)
.+++.++|+++|| +|+...+|.. ..|.+++|+.+|++ +++++|||++++.+ ++||++|+|+++
T Consensus 2 ~~~~~~~L~~~~i-~~~~~~~p~~--~~t~~~~a~~lg~~-~~~~~Ktlv~~~~~-------------~~~~l~vv~gd~ 64 (152)
T 1wdv_A 2 LEKVEEWIKARGL-TWRLLIMQKP--TRTVAEAAALLGVS-ESEIVKTLIVLDNA-------------GGVYAVVIPGDK 64 (152)
T ss_dssp -CHHHHHHHHHTC-CCEEEECSSC--CSSHHHHHHHHTSC-GGGBEEEEEEEETT-------------SCEEEEEEETTC
T ss_pred HHHHHHHHHHCCC-CcEEEEcCCC--CCCHHHHHHHcCCC-HHHeEEEEEEEeCC-------------CcEEEEEEECch
Confidence 4689999999999 8999999875 26899999999997 99999999999632 479999999999
Q ss_pred ccCHHHHHHHhhhccCCCCCCcccccccCCHhhHhhhhCCCCCcccCCCcccCccEEEchhhhccCCCeEEEccCCCCce
Q 026816 133 RFNAEAVKNFLYTLNNGKIPKKKFNLRLAPEETSMNLTGYEHNAVTCIGMKTDIPVILDEAITKLSPDFFWLGGGETDLK 212 (232)
Q Consensus 133 rld~kkl~~~l~~l~~~~lg~k~~~lrlA~~ee~~~lTGy~~GgVsPfG~~~~ipviiD~~l~~l~~~~v~~ggG~~~~~ 212 (232)
++|++|+++.+ | + +++||+++++.++|||++|+|+|||+++++|+|+|+++.++ +.||+++|+.+..
T Consensus 65 ~ld~~kl~~~~--------g-~--~l~~a~~~e~~~~tG~~~G~v~P~g~~~~v~v~~D~~l~~~--~~v~~~~g~~~~~ 131 (152)
T 1wdv_A 65 RLNINSMKELA--------G-K--PVRLARANEVVELTGYPVGGVPPVALPPNIVLVVDRILLSR--KKVYGGGGRENAL 131 (152)
T ss_dssp CBCHHHHHHHH--------T-S--CEEECCHHHHHHHHSSCGGGCCSSSCCTTCEEEEEGGGTTC--SCEEEECSSTTEE
T ss_pred hhCHHHHHHHH--------C-C--CceeCCHHHHHHHhCCCCCCCCcCCCCCCCcEEEehHHhcC--CeEEEcCCCCCeE
Confidence 99999999986 4 2 39999999999999999999999999999999999999987 6799999999999
Q ss_pred EeeCHHHHHhhhCCeEeecC
Q 026816 213 WGIKTSEFIKFVKPFIVGCS 232 (232)
Q Consensus 213 l~is~~dl~~l~~~~v~di~ 232 (232)
+.++++||.+++++.++||+
T Consensus 132 ~~v~~~dl~~~~~~~~~di~ 151 (152)
T 1wdv_A 132 LEFSPRELVEATGAVVADVS 151 (152)
T ss_dssp EEECHHHHHHHHTCEEECCB
T ss_pred EEECHHHHHHHhCCEEEeee
Confidence 99999999999999999985
No 4
>1dbu_A HI1434, cysteinyl-tRNA(Pro) deacylase; structural genomics, YBAK, structure 2 function project, S2F, hydrolase; HET: MSE; 1.80A {Haemophilus influenzae} SCOP: d.116.1.1 PDB: 1dbx_A
Probab=99.97 E-value=4.8e-31 Score=215.61 Aligned_cols=153 Identities=13% Similarity=0.246 Sum_probs=132.8
Q ss_pred HHHHHHHHCCCCceeEEEcCCCCC-CccHHHHHHHhCCCCccceEEEEEEEecccCCccccccCCCCCeEEEEEEecCCc
Q 026816 55 RLSNILRSNGVNDFQFKKVPSDYY-DWPLESRRDVLAAACIHHLCKSIVLVNTQAQSSVVDCSDRNNSKYYVVVVQYTAR 133 (232)
Q Consensus 55 rv~~~L~~~gi~~~~~~~~p~~y~-~~tle~aA~~lg~~s~~~l~KSlvl~n~~~~~~~~~~~d~~~~~y~lvVv~~~~r 133 (232)
++.++|+++|| +|++..++++-. +.+.+++|+.+|++ +++++|||+++.+. .+++||++|+|++++
T Consensus 3 ~~~~~L~~~~i-~~~~~~~~~~~~~~~t~~e~a~~l~~~-~~~~~Ktl~~~~~~-----------~~~~~~lvv~~gd~~ 69 (158)
T 1dbu_A 3 PAIDLLKKQKI-PFILHTYDHDPNNQHFGDEAAEKLGID-PNRSFKTLLVAENG-----------DQKKLACFVLATANM 69 (158)
T ss_dssp HHHHHHHHHTC-CCEEEECCCCCC-----CHHHHHHTCC-GGGEEEEEEEEETT-----------CTTSEEEEEEETTSC
T ss_pred hHHHHHHHCCC-CeEEEEEccCCcccchHHHHHHHcCCC-HhHeEEEEEEEecC-----------CCCcEEEEEEECCce
Confidence 68899999999 988876555421 13677889999998 99999999998421 124699999999999
Q ss_pred cCHHHHHHHhhhccCCCCCCcccccccCCHhhHhhhhCCCCCcccCCCcccCccEEEchhhhccCCCeEEEccCCCCceE
Q 026816 134 FNAEAVKNFLYTLNNGKIPKKKFNLRLAPEETSMNLTGYEHNAVTCIGMKTDIPVILDEAITKLSPDFFWLGGGETDLKW 213 (232)
Q Consensus 134 ld~kkl~~~l~~l~~~~lg~k~~~lrlA~~ee~~~lTGy~~GgVsPfG~~~~ipviiD~~l~~l~~~~v~~ggG~~~~~l 213 (232)
+|++|+++.++. | +++||+++++.++|||++|+|+|||+++++|+|+|+++.++ +.||+|||+.+..+
T Consensus 70 ld~~kl~~~~g~--------~--~l~~a~~e~~~~~tG~~~G~v~P~g~~~~v~v~iD~~l~~~--~~i~~~ag~~~~~~ 137 (158)
T 1dbu_A 70 LNLKKAAKSIGV--------K--KVEMADKDAAQKSTGYLVGGISPLGQKKRVKTVINSTALEF--ETIYVSGGKRGLSV 137 (158)
T ss_dssp BCHHHHHHHHTC--------S--CEEECCHHHHHHHHSSCTTSCCSSSCSSCCCEEEEGGGGGS--SCEEEECSSTTEEE
T ss_pred eCHHHHHHHhCC--------C--CeeeCCHHHHHHHhCCCCccCCCCCCCCCCEEEEEhHHhcC--CeEEEeCCCCCcEE
Confidence 999999998743 4 39999999999999999999999999999999999999986 89999999999999
Q ss_pred eeCHHHHHhhhCCeEeecC
Q 026816 214 GIKTSEFIKFVKPFIVGCS 232 (232)
Q Consensus 214 ~is~~dl~~l~~~~v~di~ 232 (232)
.++++||.+++++.++||+
T Consensus 138 ~v~~~dl~~~~~~~~~di~ 156 (158)
T 1dbu_A 138 EIAPQDLAKVLGAEFTDIV 156 (158)
T ss_dssp EECHHHHHHHHTCEEECCB
T ss_pred EECHHHHHHHhCCEEEeee
Confidence 9999999999999999985
No 5
>2dxa_A Protein YBAK; trans-editing domain, prolyl-tRNA synthetase, structural genomics, NPPSFA; HET: MSE; 1.58A {Escherichia coli}
Probab=99.97 E-value=1.4e-30 Score=215.15 Aligned_cols=156 Identities=16% Similarity=0.249 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHCCCCceeEEEcCCCCC-CccHHHHHHHhCCCCccceEEEEEEEecccCCccccccCCCCCeEEEEEEec
Q 026816 52 TEARLSNILRSNGVNDFQFKKVPSDYY-DWPLESRRDVLAAACIHHLCKSIVLVNTQAQSSVVDCSDRNNSKYYVVVVQY 130 (232)
Q Consensus 52 ~~~rv~~~L~~~gi~~~~~~~~p~~y~-~~tle~aA~~lg~~s~~~l~KSlvl~n~~~~~~~~~~~d~~~~~y~lvVv~~ 130 (232)
...++.++|+++|| +|++..++++.. +.+.+++|+.+|++ +++++|||++++++. +.+||++|+|+
T Consensus 7 ~~t~~~~~L~~~~i-~y~~~~~~h~~~~~~~~~e~a~~l~~~-~~~~~Ktlv~~~~~~-----------~~~~~lvvv~g 73 (166)
T 2dxa_A 7 GMTPAVKLLEKNKI-SFQIHTYEHDPAETNFGDEVVKKLGLN-PDQVYKTLLVAVNGD-----------MKHLAVAVTPV 73 (166)
T ss_dssp -CCHHHHHHHHTTC-CCEEEECCCCTTSCCSSCHHHHHHTCC-TTTEEEEEEEEETTE-----------EEEEEEEEEET
T ss_pred chhHHHHHHHHCCC-CcEEEEEecCCcccchHHHHHHHcCCC-HHHeeEEEEEEeCCC-----------CceEEEEEEeC
Confidence 44689999999999 899866444321 13455789999998 999999999997420 12499999999
Q ss_pred CCccCHHHHHHHhhhccCCCCCCcccccccCCHhhHhhhhCCCCCcccCCCcccCccEEEchhhhccCCCeEEEccCCCC
Q 026816 131 TARFNAEAVKNFLYTLNNGKIPKKKFNLRLAPEETSMNLTGYEHNAVTCIGMKTDIPVILDEAITKLSPDFFWLGGGETD 210 (232)
Q Consensus 131 ~~rld~kkl~~~l~~l~~~~lg~k~~~lrlA~~ee~~~lTGy~~GgVsPfG~~~~ipviiD~~l~~l~~~~v~~ggG~~~ 210 (232)
++++|++|+++.++. + +++||+++++.++|||++|+|+|||+++++|+|+|+++.++ +.||++||+.+
T Consensus 74 d~~ld~~kl~~~lg~--------~--~l~~a~~e~~~~~tG~~~G~v~P~g~~~~v~v~iD~~l~~~--~~i~~~ag~~~ 141 (166)
T 2dxa_A 74 AGQLDLKKVAKALGA--------K--KVEMADPMVAQRSTGYLVGGISPLGQKKRLPTIIDAPAQEF--ATIYVSGGKRG 141 (166)
T ss_dssp TSEECHHHHHHHHTC--------S--CEEECCHHHHHHHHSSCTTCCCSSSCSSCCCEEEEGGGGGS--SCEEEEEEETT
T ss_pred CceeCHHHHHHHhCC--------C--ceEECCHHHHHHccCCCCccCCCcCCCCCCeEEEEhHHhcC--CeEEEcCCCCC
Confidence 999999999998743 3 39999999999999999999999999999999999999986 89999999999
Q ss_pred ceEeeCHHHHHhhhCCeEeecC
Q 026816 211 LKWGIKTSEFIKFVKPFIVGCS 232 (232)
Q Consensus 211 ~~l~is~~dl~~l~~~~v~di~ 232 (232)
..+.++++||.+++++.++||+
T Consensus 142 ~~i~~~~~dl~~~~~~~~~di~ 163 (166)
T 2dxa_A 142 LDIELAAGDLAKILDAKFADIA 163 (166)
T ss_dssp EEEEECHHHHHHHHTCEEECCE
T ss_pred cEEEECHHHHHHHhCCEEEEEe
Confidence 9999999999999999999984
No 6
>1vki_A Hypothetical protein ATU3699; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.60A {Agrobacterium tumefaciens str} SCOP: d.116.1.1
Probab=99.97 E-value=7.7e-31 Score=220.50 Aligned_cols=155 Identities=16% Similarity=0.272 Sum_probs=138.3
Q ss_pred CChHHHHHHHHHHHCCCCceeEEEcCCCCCCccHHHHHHHhCCCCccceEEEEEEEecccCCccccccCCCCCeEEEEEE
Q 026816 49 IRDTEARLSNILRSNGVNDFQFKKVPSDYYDWPLESRRDVLAAACIHHLCKSIVLVNTQAQSSVVDCSDRNNSKYYVVVV 128 (232)
Q Consensus 49 ~~~~~~rv~~~L~~~gi~~~~~~~~p~~y~~~tle~aA~~lg~~s~~~l~KSlvl~n~~~~~~~~~~~d~~~~~y~lvVv 128 (232)
..+..+++.++|+++|| .|+.+.+|.. .|.+++|+.+|++ +++++|||++++++ ++||++|+
T Consensus 17 ~~~~~~~~~~~L~~~~i-~~~~~~~p~~---~T~ee~a~~l~~~-~~~~~KtLvl~~~~-------------~~~vlvvv 78 (181)
T 1vki_A 17 SRKTATELFEFLDGLGI-SHTTKQHEPV---FTVAESQSLRDLI-PGGHTKNLFVKDKK-------------DQYFVLTV 78 (181)
T ss_dssp CCCCHHHHHHHHHHHTC-CCEEEECCCC---CSHHHHHHHHTTS-CSEEEEEEEEECTT-------------CCEEEEEE
T ss_pred cchHHHHHHHHHHHCCC-CeEEEECCCC---CCHHHHHHHcCCC-ccceeEEEEEEEcC-------------CeEEEEEE
Confidence 44678899999999999 8999999874 5899999999997 99999999999642 46999999
Q ss_pred ecCCccCHHHHHHHhhhccCCCCCCcccccccCCHhhHhhhhCCCCCcccCCCc----ccCccEEEchhhhccCCCeEEE
Q 026816 129 QYTARFNAEAVKNFLYTLNNGKIPKKKFNLRLAPEETSMNLTGYEHNAVTCIGM----KTDIPVILDEAITKLSPDFFWL 204 (232)
Q Consensus 129 ~~~~rld~kkl~~~l~~l~~~~lg~k~~~lrlA~~ee~~~lTGy~~GgVsPfG~----~~~ipviiD~~l~~l~~~~v~~ 204 (232)
|+++++|++|+++.++. .| +++||+++++.++|||++|+|+|||+ +.++|+|+|+++.++ +.||+
T Consensus 79 ~gd~~ld~kkl~~~lg~-------~k--~l~~a~~eel~~~tG~~~G~v~P~Gl~~d~~~~v~vviD~sl~~~--~~i~~ 147 (181)
T 1vki_A 79 EENAVVDLKSVHKTIGA-------AS--RVSFGRPEKMLEYLGVVPGSVTVFGAINDTARQVTFVLDSDLLEN--ELVNG 147 (181)
T ss_dssp ETTCCBCTTTHHHHHTC-------SS--SCEECCHHHHHHHHCCCTTCCCGGGGGGCTTCCEEEEEETTGGGS--SEEEE
T ss_pred eCCCccCHHHHHHHhCC-------CC--CeEECCHHHHHHHHCCCcceECcceeccCCCCCCEEEEchHHhcC--CeEEE
Confidence 99999999999998741 23 38999999999999999999999999 568999999999987 89999
Q ss_pred ccCCCCceEeeCHHHHHhhhC-----CeEeecC
Q 026816 205 GGGETDLKWGIKTSEFIKFVK-----PFIVGCS 232 (232)
Q Consensus 205 ggG~~~~~l~is~~dl~~l~~-----~~v~di~ 232 (232)
|||.++..+.|+++||+++++ +.|+|++
T Consensus 148 ~ag~~~~~i~l~~~dL~~~~~~~~~~~~~v~~~ 180 (181)
T 1vki_A 148 HPLSNDQTTTIASKDLIRFLEATGHAPLVLKVS 180 (181)
T ss_dssp CSSSTTEEEEEEHHHHHHHHHHTTCCCEEECCB
T ss_pred eCCCCCeEEEECHHHHHHHHHhcCCCeEEEeCC
Confidence 999999999999999999986 4777753
No 7
>1vjf_A DNA-binding protein, putative; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI; HET: MSE; 1.62A {Caulobacter crescentus CB15} SCOP: d.116.1.1
Probab=99.97 E-value=1.2e-30 Score=219.22 Aligned_cols=152 Identities=18% Similarity=0.293 Sum_probs=136.6
Q ss_pred hHHHHHHHHHHHCCCCceeEEEcCCCCCCccHHHHHHHhCCCCccceEEEEEEEecccCCccccccCCCCCeEEEEEEec
Q 026816 51 DTEARLSNILRSNGVNDFQFKKVPSDYYDWPLESRRDVLAAACIHHLCKSIVLVNTQAQSSVVDCSDRNNSKYYVVVVQY 130 (232)
Q Consensus 51 ~~~~rv~~~L~~~gi~~~~~~~~p~~y~~~tle~aA~~lg~~s~~~l~KSlvl~n~~~~~~~~~~~d~~~~~y~lvVv~~ 130 (232)
++.+++.++|+++|| .|+...+|+. .|.+++|+.+|++ +++++|||++++++ ++||++|+|+
T Consensus 14 ~~~~~v~~~L~~~~i-~~~~~~~p~~---~T~ee~a~~l~~~-~~~~~KtLvl~~~~-------------~~~~lvvv~g 75 (180)
T 1vjf_A 14 KTRADLFAFFDAHGV-DHKTLDHPPV---FRVEEGLEIKAAM-PGGHTKNLFLKDAK-------------GQLWLISALG 75 (180)
T ss_dssp CCHHHHHHHHHHHTC-CCEEEECCCC---CSHHHHHHHHHHS-CSEEEEEEEEEETT-------------SCEEEEEEET
T ss_pred chHHHHHHHHHHCCC-CEEEEecCCC---CCHHHHHHHcCCC-ccceeeEEEEEeCC-------------CCEEEEEEeC
Confidence 567899999999999 8999999875 5889999999997 99999999999732 4699999999
Q ss_pred CCccCHHHHHHHhhhccCCCCCCcccccccCCHhhHhhhhCCCCCcccCCCccc----CccEEEchhhhccCCCeEEEcc
Q 026816 131 TARFNAEAVKNFLYTLNNGKIPKKKFNLRLAPEETSMNLTGYEHNAVTCIGMKT----DIPVILDEAITKLSPDFFWLGG 206 (232)
Q Consensus 131 ~~rld~kkl~~~l~~l~~~~lg~k~~~lrlA~~ee~~~lTGy~~GgVsPfG~~~----~ipviiD~~l~~l~~~~v~~gg 206 (232)
++++|++|+++.++. | +++||++++++++|||++|+|+|||+.+ ++|+|+|+++.++ +.||++|
T Consensus 76 d~~ld~kkl~~~lg~--------k--~l~~a~~eel~~~tG~~~G~v~P~Gl~~~~~~~v~vviD~sl~~~--~~i~~~a 143 (180)
T 1vjf_A 76 ETTIDLKKLHHVIGS--------G--RLSFGPQEMMLETLGVTPGSVTAFGLINDTEKRVRFVLDKALADS--DPVNFHP 143 (180)
T ss_dssp TCCCCTTTHHHHHTC--------S--CEEECCHHHHHHHHCCCTTCCCGGGGGGCTTCCEEEEEEHHHHTC--SSEEECS
T ss_pred CCccCHHHHHHHhCC--------C--CeeeCCHHHHHHHhCCCCceeCccccCCCCCCccEEEEchHHhcC--CcEEEeC
Confidence 999999999998743 3 3999999999999999999999999965 4999999999986 8999999
Q ss_pred CCCCceEeeCHHHHHhhhCC-----eEeecC
Q 026816 207 GETDLKWGIKTSEFIKFVKP-----FIVGCS 232 (232)
Q Consensus 207 G~~~~~l~is~~dl~~l~~~-----~v~di~ 232 (232)
|.++..+.|+++||++++++ .|+|++
T Consensus 144 g~~~~~i~l~~~dL~~~~~~~~~~~~~v~~~ 174 (180)
T 1vjf_A 144 LKNDATTAVSQAGLRRFLAALGVEPMIVDFA 174 (180)
T ss_dssp SSTTEEEEECHHHHHHHHHHTTCCCEEEETT
T ss_pred CCCCeEEEECHHHHHHHHHhcCCCeEEEECc
Confidence 99999999999999999974 677764
No 8
>3mem_A Putative signal transduction protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.25A {Marinobacter aquaeolei}
Probab=99.93 E-value=9.9e-26 Score=212.93 Aligned_cols=133 Identities=17% Similarity=0.243 Sum_probs=119.6
Q ss_pred HHHHHHHHHHC--CCCceeEEEcCCCCCCccHHHHHHHhCCCCccceEEEEEEEecccCCccccccCCCCCeEEEEEEec
Q 026816 53 EARLSNILRSN--GVNDFQFKKVPSDYYDWPLESRRDVLAAACIHHLCKSIVLVNTQAQSSVVDCSDRNNSKYYVVVVQY 130 (232)
Q Consensus 53 ~~rv~~~L~~~--gi~~~~~~~~p~~y~~~tle~aA~~lg~~s~~~l~KSlvl~n~~~~~~~~~~~d~~~~~y~lvVv~~ 130 (232)
.++++++|+++ || +|++.. |++ +++++|||+++++ ++|+++|+|+
T Consensus 5 ~~~v~~~L~~~~~~i-~y~~~~-----------------g~~-~~~i~Ktl~~~~~--------------~~~~l~v~p~ 51 (457)
T 3mem_A 5 PVVVQQALGDNAPGV-SFRSVS-----------------QID-TGHLLRMVLLSDD--------------QGNLQAICRR 51 (457)
T ss_dssp CHHHHHHHTTSCTTC-EEEECC-----------------SSC-GGGBEEEEEEEET--------------TEEEEEEEET
T ss_pred hHHHHHHHHhCCCCC-ceEEeC-----------------CCC-HhHeeeEEEEEEC--------------CcEEEEEecC
Confidence 47899999999 99 776653 887 9999999999974 3599999999
Q ss_pred CCccCHHHHHHHhhhccCCCCCCcccccccCCHhhHhhhh-CCCCCcccCCCcccCccEEEchhhhccCCCeEEEccCCC
Q 026816 131 TARFNAEAVKNFLYTLNNGKIPKKKFNLRLAPEETSMNLT-GYEHNAVTCIGMKTDIPVILDEAITKLSPDFFWLGGGET 209 (232)
Q Consensus 131 ~~rld~kkl~~~l~~l~~~~lg~k~~~lrlA~~ee~~~lT-Gy~~GgVsPfG~~~~ipviiD~~l~~l~~~~v~~ggG~~ 209 (232)
++++|+||+++.+|. | ++|++++++.++| ||.+|||||||+++++|+|+|+++.++ +.||++||.+
T Consensus 52 ~~~ldlk~l~~~~g~--------k---~~~~~~~~~~~~~~g~~~Ggv~P~g~~~~~~~~iD~~l~~~--~~i~~~~G~~ 118 (457)
T 3mem_A 52 NDMLDLEALNKRLGR--------D---LRMMQRREQVRVRQKAGLQELPALPSLTGWPTVVDRRVDEL--EAVALELGEQ 118 (457)
T ss_dssp TSEECHHHHHHHHTC--------C---CEECCHHHHHHHHHHHTCSSCCSCGGGTCCCEEEEHHHHHC--SEEEEECSSS
T ss_pred CCeeCHHHHHHHhCC--------C---CeeCCHHHHHHHcCCCCCCCCCCCCCCcCCCEEEehhhccC--CEEEEECCCC
Confidence 999999999999753 3 8999999999998 699999999999999999999999987 9999999999
Q ss_pred CceEeeCHHHHHhhhC-CeEeec
Q 026816 210 DLKWGIKTSEFIKFVK-PFIVGC 231 (232)
Q Consensus 210 ~~~l~is~~dl~~l~~-~~v~di 231 (232)
+..+.|+++||.++++ +.+.++
T Consensus 119 ~~~i~l~~~dl~~~~~~~~~~~f 141 (457)
T 3mem_A 119 DLGLMMPAEDFRQLTAKAARHDF 141 (457)
T ss_dssp SEEEEEEHHHHHHHTTTSEEECC
T ss_pred CceEEECHHHHHHHHccCCcccc
Confidence 9999999999999996 455554
No 9
>2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A*
Probab=99.18 E-value=7e-10 Score=106.66 Aligned_cols=102 Identities=20% Similarity=0.267 Sum_probs=88.1
Q ss_pred ccHHHHHHHhCCCCccceEEEEEEEecccCCccccccCCCCCeEEEEEEecCCccCHHHHHHHhhhccCCCCCCcccccc
Q 026816 80 WPLESRRDVLAAACIHHLCKSIVLVNTQAQSSVVDCSDRNNSKYYVVVVQYTARFNAEAVKNFLYTLNNGKIPKKKFNLR 159 (232)
Q Consensus 80 ~tle~aA~~lg~~s~~~l~KSlvl~n~~~~~~~~~~~d~~~~~y~lvVv~~~~rld~kkl~~~l~~l~~~~lg~k~~~lr 159 (232)
.|.++.+..+|++ ++++.|++++..+ ++++++++++++++|++|++++++. + .+.
T Consensus 261 ~ti~~l~~~lg~~-~~~i~K~l~~~~~--------------~~~~~vli~gd~el~~~kl~~~l~~--------~--~l~ 315 (572)
T 2j3l_A 261 GTIAEVANFFEVE-PQRIIKSVLFIAD--------------EEPVMVLVRGDHDVNDVKLKNFLGA--------D--FLD 315 (572)
T ss_dssp CSHHHHHHHHTCC-GGGBEEEEEEEET--------------TEEEEEEEETTCCBCHHHHHHHHTC--------S--CEE
T ss_pred CcHHHHHHHhCcC-HHHeEEEEEEEeC--------------CcEEEEEeeCccccCHHHHHHhhCC--------C--ccc
Confidence 3578899999997 9999999999852 3689999999999999999998743 3 388
Q ss_pred cCCHhhHhhhhCCCCCcccCCCcccCccEEEchhhhccCCCeEEEccCC
Q 026816 160 LAPEETSMNLTGYEHNAVTCIGMKTDIPVILDEAITKLSPDFFWLGGGE 208 (232)
Q Consensus 160 lA~~ee~~~lTGy~~GgVsPfG~~~~ipviiD~~l~~l~~~~v~~ggG~ 208 (232)
+++.+++.++|||..|+++|+|++.++|+++|.+|.+. +.++.|||.
T Consensus 316 ~a~~~el~~~~g~~~g~~~p~gl~~~i~~~iD~sl~r~--~~~~~ga~~ 362 (572)
T 2j3l_A 316 EATEEDARRVLGAGFGSIGPVNVSEDVKIYADLAVQDL--ANAIVGANE 362 (572)
T ss_dssp ECCHHHHHHHHSSCTTSCCSTTCCTTCEEEEETTTTTC--CSEEEECSS
T ss_pred cCCHHHHHHhhCCCccccCCccCCCCCcEEEehhhhcC--CceEEccCC
Confidence 99999999999999999999999889999999999986 555566654
No 10
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=51.80 E-value=12 Score=24.20 Aligned_cols=23 Identities=35% Similarity=0.504 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhh
Q 026816 4 ALAELERVQTEILPRISKLEQTI 26 (232)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~ 26 (232)
-+++++.-|..+-+||.+||..+
T Consensus 24 Llae~~ssq~KlKqRit~lE~~v 46 (46)
T 3swy_A 24 LLAEYNATQMKMKQRLSQLESQV 46 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC
Confidence 46788999999999999999753
No 11
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=40.95 E-value=21 Score=25.37 Aligned_cols=26 Identities=31% Similarity=0.493 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhcCC
Q 026816 4 ALAELERVQTEILPRISKLEQTILSV 29 (232)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (232)
.+++++.-|..+-+||.+||..+.+.
T Consensus 26 LLaEy~ssQ~KLKqRit~LE~~~~~~ 51 (74)
T 3swf_A 26 ILAEYESMQQKLKQRLTKVEKFLKPL 51 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 46788999999999999999988764
No 12
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=32.31 E-value=49 Score=24.69 Aligned_cols=41 Identities=10% Similarity=-0.018 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHCCCCceeEEEcCCC-CCCccHHHHHHHhCCC
Q 026816 51 DTEARLSNILRSNGVNDFQFKKVPSD-YYDWPLESRRDVLAAA 92 (232)
Q Consensus 51 ~~~~rv~~~L~~~gi~~~~~~~~p~~-y~~~tle~aA~~lg~~ 92 (232)
+..++.+++|+++|+ +|+++.+-.+ -+...+.+....+|.+
T Consensus 14 ~~c~ka~~~L~~~gi-~~~~~di~~~~~~~~eL~~~l~~~g~~ 55 (120)
T 3fz4_A 14 STCRRAKAELDDLAW-DYDAIDIKKNPPAASLIRNWLENSGLE 55 (120)
T ss_dssp HHHHHHHHHHHHHTC-CEEEEETTTSCCCHHHHHHHHHHSCCC
T ss_pred hHHHHHHHHHHHcCC-ceEEEEeccCchhHHHHHHHHHHcCCC
Confidence 577899999999999 8888877443 1122334444556654
No 13
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=32.17 E-value=38 Score=21.54 Aligned_cols=26 Identities=19% Similarity=0.339 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhcC
Q 026816 3 AALAELERVQTEILPRISKLEQTILS 28 (232)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 28 (232)
.-..+|..||..+=.||..||.++..
T Consensus 9 dlvsel~~r~e~LE~Ri~~LE~KLd~ 34 (43)
T 2pnv_A 9 DMISDLNERSEDFEKRIVTLETKLET 34 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 45678999999999999999988854
No 14
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=30.94 E-value=68 Score=23.89 Aligned_cols=45 Identities=11% Similarity=0.132 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHCCCCceeEEEcCCCC-CCccHHHHHHHhCCCCccce
Q 026816 51 DTEARLSNILRSNGVNDFQFKKVPSDY-YDWPLESRRDVLAAACIHHL 97 (232)
Q Consensus 51 ~~~~rv~~~L~~~gi~~~~~~~~p~~y-~~~tle~aA~~lg~~s~~~l 97 (232)
+..++.+++|+++|+ .|+++.+-.+- +...+.+-...+|.+ +..+
T Consensus 15 ~~c~ka~~~L~~~gi-~~~~~di~~~~~~~~eL~~~l~~~g~~-~~~l 60 (120)
T 3gkx_A 15 STCQKAKKWLIENNI-EYTNRLIVDDNPTVEELKAWIPLSGLP-VKKF 60 (120)
T ss_dssp HHHHHHHHHHHHTTC-CCEEEETTTTCCCHHHHHHHHHHHTSC-GGGG
T ss_pred hHHHHHHHHHHHcCC-ceEEEecccCcCCHHHHHHHHHHcCCC-HHHe
Confidence 577899999999999 88888775431 122234445556754 4433
No 15
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=30.64 E-value=74 Score=23.55 Aligned_cols=36 Identities=14% Similarity=0.148 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHCCCCceeEEEcCCCCCCccHHHHHHHh
Q 026816 51 DTEARLSNILRSNGVNDFQFKKVPSDYYDWPLESRRDVL 89 (232)
Q Consensus 51 ~~~~rv~~~L~~~gi~~~~~~~~p~~y~~~tle~aA~~l 89 (232)
+...+.+++|+++|+ .|+++.+-.+ ..+.++-...+
T Consensus 11 ~~c~ka~~~L~~~gi-~~~~~di~~~--~~~~~el~~~l 46 (120)
T 3l78_A 11 TSCRKARAWLNRHDV-VFQEHNIMTS--PLSRDELLKIL 46 (120)
T ss_dssp HHHHHHHHHHHHTTC-CEEEEETTTS--CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC-CeEEEecccC--CCcHHHHHHHH
Confidence 577899999999999 8888877543 34444444444
No 16
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=29.69 E-value=93 Score=20.92 Aligned_cols=23 Identities=13% Similarity=0.213 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHHCCCCceeEEEcC
Q 026816 51 DTEARLSNILRSNGVNDFQFKKVP 74 (232)
Q Consensus 51 ~~~~rv~~~L~~~gi~~~~~~~~p 74 (232)
+.-.+++++|+++|+ +|+++.+.
T Consensus 15 p~C~~ak~~L~~~gi-~y~~idI~ 37 (87)
T 1aba_A 15 GPCDNAKRLLTVKKQ-PFEFINIM 37 (87)
T ss_dssp HHHHHHHHHHHHTTC-CEEEEESC
T ss_pred ccHHHHHHHHHHcCC-CEEEEEee
Confidence 566799999999999 88888875
No 17
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=28.85 E-value=80 Score=22.40 Aligned_cols=24 Identities=17% Similarity=0.257 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHCCCCceeEEEcCCC
Q 026816 52 TEARLSNILRSNGVNDFQFKKVPSD 76 (232)
Q Consensus 52 ~~~rv~~~L~~~gi~~~~~~~~p~~ 76 (232)
-=.+++++|+++|| +|+.+.+..+
T Consensus 16 ~C~~aK~~L~~~gi-~y~~idi~~d 39 (92)
T 2lqo_A 16 YCLRLKTALTANRI-AYDEVDIEHN 39 (92)
T ss_dssp SHHHHHHHHHHTTC-CCEEEETTTC
T ss_pred hHHHHHHHHHhcCC-ceEEEEcCCC
Confidence 34689999999999 8888887654
No 18
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=28.43 E-value=83 Score=23.92 Aligned_cols=22 Identities=18% Similarity=0.406 Sum_probs=18.8
Q ss_pred HHHHHHHHHHCCCCceeEEEcCC
Q 026816 53 EARLSNILRSNGVNDFQFKKVPS 75 (232)
Q Consensus 53 ~~rv~~~L~~~gi~~~~~~~~p~ 75 (232)
.++++++|++.|| +|+.+.+..
T Consensus 19 c~~aK~lL~~kgV-~feEidI~~ 40 (121)
T 1u6t_A 19 QQDVLGFLEANKI-GFEEKDIAA 40 (121)
T ss_dssp HHHHHHHHHHTTC-CEEEEECTT
T ss_pred HHHHHHHHHHCCC-ceEEEECCC
Confidence 3799999999999 888887754
No 19
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=27.22 E-value=1.2e+02 Score=19.68 Aligned_cols=44 Identities=23% Similarity=0.419 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCcCCCCCCCCCcCCCChHHHHHHHHHHHCCC
Q 026816 2 EAALAELERVQTEILPRISKLEQTILSVDDDDVSSSAAVPASTPHTTIRDTEARLSNILRSNGV 65 (232)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~~~L~~~gi 65 (232)
|.++..|....-....|+..||..-... . ---+|++++|.++|+
T Consensus 3 eq~l~kLKe~n~~L~~kv~~Le~~c~~~-------------------e-QEieRL~~LLkqHgl 46 (48)
T 3vmx_A 3 ERQILRLKQINIQLATKIQHLEFSCSEK-------------------E-QEIERLNKLLKQNGL 46 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------H-HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHH-------------------H-HHHHHHHHHHHHcCC
Confidence 4567888889999999999999876553 0 123589999999986
No 20
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=26.82 E-value=70 Score=24.58 Aligned_cols=44 Identities=9% Similarity=0.025 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHHCCCCceeEEEcCCC-CCCccHHHHHHHhCCCCccc
Q 026816 51 DTEARLSNILRSNGVNDFQFKKVPSD-YYDWPLESRRDVLAAACIHH 96 (232)
Q Consensus 51 ~~~~rv~~~L~~~gi~~~~~~~~p~~-y~~~tle~aA~~lg~~s~~~ 96 (232)
+..++.+++|+++|+ .|+++.+-.+ .+...+.+....+|.+ +..
T Consensus 13 ~~crkak~~L~~~gi-~~~~idi~~~~~~~~eL~~~~~~~g~p-~~~ 57 (141)
T 1s3c_A 13 GTSRNTLEMIRNSGT-EPTIILYLENPPSRDELVKLIADMGIS-VRA 57 (141)
T ss_dssp HHHHHHHHHHHHTTC-CCEEECTTTSCCCHHHHHHHHHHHTSC-HHH
T ss_pred hHHHHHHHHHHHcCC-CEEEEECCCCCccHHHHHHHhcccCCC-HHH
Confidence 677899999999999 8888766443 1122344455667775 443
No 21
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=25.82 E-value=1.3e+02 Score=22.34 Aligned_cols=36 Identities=11% Similarity=0.250 Sum_probs=25.1
Q ss_pred hHHHHHHHHHHHCCCCceeEEEcCCCCCCccHHHHHHHh
Q 026816 51 DTEARLSNILRSNGVNDFQFKKVPSDYYDWPLESRRDVL 89 (232)
Q Consensus 51 ~~~~rv~~~L~~~gi~~~~~~~~p~~y~~~tle~aA~~l 89 (232)
+.-++++++|+++|+ +|+++.+..+ .++.++-...+
T Consensus 12 ~~C~ka~~~L~~~gi-~y~~~di~~~--~~~~~el~~~l 47 (132)
T 1z3e_A 12 TSCRKARAWLEEHEI-PFVERNIFSE--PLSIDEIKQIL 47 (132)
T ss_dssp HHHHHHHHHHHHTTC-CEEEEETTTS--CCCHHHHHHHH
T ss_pred hHHHHHHHHHHHcCC-ceEEEEccCC--CccHHHHHHHH
Confidence 566799999999999 8888877543 33444444433
No 22
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=25.00 E-value=76 Score=23.63 Aligned_cols=38 Identities=8% Similarity=-0.001 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHCCCCceeEEEcCCCCCCccH---HHHHHHhCC
Q 026816 51 DTEARLSNILRSNGVNDFQFKKVPSDYYDWPL---ESRRDVLAA 91 (232)
Q Consensus 51 ~~~~rv~~~L~~~gi~~~~~~~~p~~y~~~tl---e~aA~~lg~ 91 (232)
+..++.+++|+++|+ +|+++.+-.+ ..+. .+-...+|.
T Consensus 16 ~~c~ka~~~L~~~gi-~~~~~di~~~--~~~~~eL~~~l~~~g~ 56 (121)
T 3rdw_A 16 SKSRETLALVEQQGI-TPQVVLYLET--PPSVDKLKELLQQLGF 56 (121)
T ss_dssp HHHHHHHHHHHTTTC-CCEEECTTTS--CCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCC-CcEEEeeccC--CCcHHHHHHHHHhcCC
Confidence 577899999999999 8887766443 3343 344455565
No 23
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=22.34 E-value=1.4e+02 Score=20.41 Aligned_cols=22 Identities=18% Similarity=0.516 Sum_probs=18.7
Q ss_pred HHHHHHHHHCCCCceeEEEcCCC
Q 026816 54 ARLSNILRSNGVNDFQFKKVPSD 76 (232)
Q Consensus 54 ~rv~~~L~~~gi~~~~~~~~p~~ 76 (232)
++++++|+++|+ +|+.+.+..+
T Consensus 22 ~~ak~~L~~~~i-~~~~~di~~~ 43 (93)
T 1t1v_A 22 SEVTRILDGKRI-QYQLVDISQD 43 (93)
T ss_dssp HHHHHHHHHTTC-CCEEEETTSC
T ss_pred HHHHHHHHHCCC-ceEEEECCCC
Confidence 799999999999 8888877543
No 24
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.41 E-value=1.2e+02 Score=21.71 Aligned_cols=21 Identities=14% Similarity=0.335 Sum_probs=17.9
Q ss_pred HHHHHHHHHCCCCceeEEEcCC
Q 026816 54 ARLSNILRSNGVNDFQFKKVPS 75 (232)
Q Consensus 54 ~rv~~~L~~~gi~~~~~~~~p~ 75 (232)
++++++|+++|+ +|+.+.+..
T Consensus 28 ~~ak~~L~~~gi-~y~~vdI~~ 48 (111)
T 2ct6_A 28 QDVVRFLEANKI-EFEEVDITM 48 (111)
T ss_dssp HHHHHHHHHTTC-CEEEEETTT
T ss_pred HHHHHHHHHcCC-CEEEEECCC
Confidence 389999999999 888887754
Done!