Citrus Sinensis ID: 026820
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 232 | 2.2.26 [Sep-21-2011] | |||||||
| Q500U8 | 326 | Tetraketide alpha-pyrone | no | no | 0.836 | 0.595 | 0.406 | 2e-38 | |
| Q9S9N9 | 344 | Cinnamoyl-CoA reductase 1 | no | no | 0.818 | 0.552 | 0.456 | 6e-36 | |
| Q9SAH9 | 332 | Cinnamoyl-CoA reductase 2 | no | no | 0.818 | 0.572 | 0.446 | 2e-34 | |
| Q9CA28 | 321 | Tetraketide alpha-pyrone | no | no | 0.836 | 0.604 | 0.336 | 6e-30 | |
| P51106 | 354 | Dihydroflavonol-4-reducta | N/A | no | 0.797 | 0.522 | 0.362 | 8e-28 | |
| P51102 | 382 | Dihydroflavonol-4-reducta | no | no | 0.810 | 0.492 | 0.372 | 8e-28 | |
| Q9XES5 | 348 | Bifunctional dihydroflavo | N/A | no | 0.814 | 0.543 | 0.359 | 2e-27 | |
| P51110 | 337 | Dihydroflavonol-4-reducta | no | no | 0.814 | 0.560 | 0.354 | 4e-27 | |
| Q84KP0 | 347 | Bifunctional dihydroflavo | N/A | no | 0.814 | 0.544 | 0.349 | 9e-27 | |
| P51104 | 360 | Dihydroflavonol-4-reducta | N/A | no | 0.814 | 0.525 | 0.351 | 2e-26 |
| >sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 128/197 (64%), Gaps = 3/197 (1%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNW 60
GVFH ASP L +PE+E+L PA++GTLNVL + +K ++RVVLTSS S++ ++
Sbjct: 80 GVFHTASP-VLKPTSNPEEEILRPAIEGTLNVLRSCRKNPSLKRVVLTSSSSTVRIRDDF 138
Query: 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQ 120
+DE+ WT ++ CK ++WY++SKTLAE+AAW+F+E+NG D+V + P+ +GP
Sbjct: 139 DPKIPLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSEENGIDLVTVLPSFLVGPSLP 198
Query: 121 PYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQ 179
P + ++ + + LL+G + Q H +G VH+ DVA+ +++FE AA GRY+C++ +
Sbjct: 199 PDLCSTASDVLGLLKGETEKFQWHGQMGYVHIDDVARTHIVVFEHEAAQGRYICSSNVIS 258
Query: 180 FAEFAEKVSKLFPEYPI 196
E +S +P PI
Sbjct: 259 LEELVSFLSARYPSLPI 275
|
Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 150 bits (380), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 122/195 (62%), Gaps = 5/195 (2%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH ASP T DDP+ +++ PAV G V+ AA + V+RVV+TSSI ++ +PN
Sbjct: 84 GVFHTASPVT-DDPE----QMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRD 138
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
V+DE+ W+DLDFCK+ K WY K +AE+AAWE A++ G D+V ++P LGP QP
Sbjct: 139 PEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQP 198
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS + + L GS T + V V+DVA A VL++E +ASGRYL
Sbjct: 199 TINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASGRYLLAESARHRG 258
Query: 182 EFAEKVSKLFPEYPI 196
E E ++KLFPEYP+
Sbjct: 259 EVVEILAKLFPEYPL 273
|
Involved in the latter stages of lignin biosynthesis. Catalyzes one of the last steps of monolignol biosynthesis, the conversion of cinnamoyl-CoAs into their corresponding cinnamaldehydes. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 4 |
| >sp|Q9SAH9|CCR2_ARATH Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 116/195 (59%), Gaps = 5/195 (2%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH ASP T DDP+ +L PAV G V++AA K V+RVV TSSI ++ NPN
Sbjct: 79 GVFHTASPMT-DDPE----TMLEPAVNGAKFVIDAAAKAKVKRVVFTSSIGAVYMNPNRD 133
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
++DE W+DLDFCK+ K WY K LAE++AWE A+ G D+V ++P LGP Q
Sbjct: 134 TQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKGVDLVVLNPVLVLGPPLQS 193
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS + + L GS T + V V+DVA VL++E +ASGRY+
Sbjct: 194 AINASLVHILKYLTGSAKTYANLTQVYVDVRDVALGHVLVYEAPSASGRYILAETALHRG 253
Query: 182 EFAEKVSKLFPEYPI 196
E E ++K FPEYP+
Sbjct: 254 EVVEILAKFFPEYPL 268
|
Cinnamoyl-CoA reductase probably involved in the formation of phenolic compounds associated with the hypersensitive response. Seems not to be involved in lignin biosynthesis. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 4 EC: 4 |
| >sp|Q9CA28|TKPR2_ARATH Tetraketide alpha-pyrone reductase 2 OS=Arabidopsis thaliana GN=TKPR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 130 bits (328), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 112/196 (57%), Gaps = 2/196 (1%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLE--AAKKFGVRRVVLTSSISSIVPNPN 59
GVFH ASP + + ++ L+ P ++GT NV+ A K ++R+VLTSS SSI +
Sbjct: 76 GVFHTASPVLVPQDHNIQETLVDPIIKGTTNVMSSCAKSKATLKRIVLTSSCSSIRYRFD 135
Query: 60 WPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFP 119
+ ++E+ W+D ++CK +WY +KTL E+ AW AE+ G D+V ++P+ +GP
Sbjct: 136 ATEASPLNESHWSDPEYCKRFNLWYGYAKTLGEREAWRIAEEKGLDLVVVNPSFVVGPLL 195
Query: 120 QPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQ 179
P ++ ++ + +G ++ +G VH+ DV A VL E ASGR +C++ +
Sbjct: 196 GPKPTSTLLMILAIAKGLAGEYPNFTVGFVHIDDVVAAHVLAMEEPKASGRIICSSSVAH 255
Query: 180 FAEFAEKVSKLFPEYP 195
++E E + +P YP
Sbjct: 256 WSEIIELMRNKYPNYP 271
|
May be involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 124 bits (310), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 22/207 (10%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSI----VP 56
GVFH+A+P D +DPE E++ P V+G L+++ A K+ G V+R+V TSS S+ P
Sbjct: 80 GVFHVATPMDFDS-QDPENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEERP 138
Query: 57 NPNWPQGKVIDETSWTDLDFCKSHKI---WYSMSKTLAEKAAWEFAEKNGTDVVAIHPAT 113
P + D+ +W+D+D+C+ K+ Y +SK LAEKAA E+A +NG D ++I P
Sbjct: 139 RPAY------DQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYASENGLDFISIIPTL 192
Query: 114 SLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL----GAVHVKDVAKAQVLLFETSAASG 169
+GPF + S L+ G+ + HY + VH+ D+ A LFE A+G
Sbjct: 193 VVGPFLSAGMPPSLVTALALITGN---EAHYSILKQVQLVHLDDLCDAMTFLFEHPEANG 249
Query: 170 RYLCTNGIYQFAEFAEKVSKLFPEYPI 196
RY+C++ A + FPEY I
Sbjct: 250 RYICSSHDATIHGLARMLQDRFPEYDI 276
|
Hordeum vulgare (taxid: 4513) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 124 bits (310), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 111/204 (54%), Gaps = 16/204 (7%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAA-KKFGVRRVVLTSSISSIVPNPNW 60
GVFH+A+P + KDPE E++ P V G L +++A K VRR V TSS ++ N
Sbjct: 80 GVFHVATPMDFES-KDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFTSSAGTV--NVEE 136
Query: 61 PQGKVIDETSWTDLDFCKSHKI---WYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGP 117
Q V DE W+DL+F S K+ Y +SKTLAEKAAW+FAE+ G D ++I P +GP
Sbjct: 137 HQKNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGP 196
Query: 118 F-----PQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYL 172
F P + A + + S Q Y VH+ D+ A + L+E +AA GRY+
Sbjct: 197 FITTSMPPSLITALSPITRNEAHYSIIRQGQY----VHLDDLCNAHIFLYEQAAAKGRYI 252
Query: 173 CTNGIYQFAEFAEKVSKLFPEYPI 196
C++ ++ + +PEY +
Sbjct: 253 CSSHDATILTISKFLRPKYPEYNV 276
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 117/203 (57%), Gaps = 14/203 (6%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNW 60
GVFH+A+P + KDPE E++ P + G L++L+A +K VR++V TSS ++ N
Sbjct: 80 GVFHVATPMDFES-KDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTV--NVEE 136
Query: 61 PQGKVIDETSWTDLDFCKSHKI---WYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGP 117
Q V DE++W+D++FC+S K+ Y +SKTLAE+AAW++A++N D + I P +GP
Sbjct: 137 HQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGP 196
Query: 118 FPQPYVNASGAVLQRLLQGSKDTQEHYWL----GAVHVKDVAKAQVLLFETSAASGRYLC 173
F P + S L L + HY + VH+ D+ + + L+E A GRY+C
Sbjct: 197 FLMPSMPPS---LITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLYEHPKAEGRYIC 253
Query: 174 TNGIYQFAEFAEKVSKLFPEYPI 196
++ E + + + +PEY I
Sbjct: 254 SSHDATIHELVKMLREKYPEYNI 276
|
Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate. Malus domestica (taxid: 3750) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 4 |
| >sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 115/203 (56%), Gaps = 14/203 (6%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNW 60
GVFH+A+P + KDPE E++ P ++G L ++++ A VRR+V TSS ++ N
Sbjct: 80 GVFHVATPMDFES-KDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTV--NIQE 136
Query: 61 PQGKVIDETSWTDLDFCKSHKI---WYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGP 117
Q V DE+ W+D++FC++ K+ Y +SKTLAE+AAW++A++N D + I P +GP
Sbjct: 137 HQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGP 196
Query: 118 FPQPYVNASGAVLQRLLQGSKDTQEHYWL----GAVHVKDVAKAQVLLFETSAASGRYLC 173
F + S L L + HY + VH+ D+ A + LFE A GRY+C
Sbjct: 197 FIMSSMPPS---LITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEGRYIC 253
Query: 174 TNGIYQFAEFAEKVSKLFPEYPI 196
++ + A+ + + +PEY I
Sbjct: 254 SSHDCIILDLAKMLREKYPEYNI 276
|
Vitis vinifera (taxid: 29760) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
| >sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 120 bits (300), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 117/203 (57%), Gaps = 14/203 (6%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNW 60
GVFH+A+P + +DPE E++ P + G L++L+A +K VR++V TSS ++ N
Sbjct: 80 GVFHVATPMDFES-RDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTV--NVEE 136
Query: 61 PQGKVIDETSWTDLDFCKSHKI---WYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGP 117
Q V DE++W+D++FC+S K+ Y +SKTLAE+AAW++A++N D + I P +GP
Sbjct: 137 HQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGP 196
Query: 118 FPQPYVNASGAVLQRLLQGSKDTQEHYWL----GAVHVKDVAKAQVLLFETSAASGRYLC 173
F P + S L L + HY + VH+ D+ + + L++ A GRY+C
Sbjct: 197 FLMPSMPPS---LITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLYKHPKAEGRYIC 253
Query: 174 TNGIYQFAEFAEKVSKLFPEYPI 196
++ E + + + +PEY I
Sbjct: 254 SSHDATIHELVKMLREKYPEYNI 276
|
Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate. Pyrus communis (taxid: 23211) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 4 |
| >sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 113/202 (55%), Gaps = 13/202 (6%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH+A+P + KDPE E++ P + G L++L++ K +RRVV TSS ++ N
Sbjct: 97 GVFHIATPMDFES-KDPENEMIKPTINGMLDILKSCVKAKLRRVVFTSSGGTV--NVEAT 153
Query: 62 QGKVIDETSWTDLDFCKSHKI---WYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 118
Q V DET W+ LDF +S K+ Y +SK LAE+AAW++A +N + ++I P +GPF
Sbjct: 154 QKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENNLEFISIIPPLVVGPF 213
Query: 119 PQPYVNASGAVLQRLLQGSKDTQEHYWL----GAVHVKDVAKAQVLLFETSAASGRYLCT 174
P + S L L T+ HY + VH+ D+ + + L+E A+GRY+ +
Sbjct: 214 IMPSMPPS---LITALSPITRTESHYTIIKQGQFVHLDDLCMSHIFLYENPKANGRYIAS 270
Query: 175 NGIYQFAEFAEKVSKLFPEYPI 196
+ A+ + + +PEY +
Sbjct: 271 ACAATIYDIAKMLREEYPEYNV 292
|
Dianthus caryophyllus (taxid: 3570) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 1 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 232 | ||||||
| 255556687 | 334 | cinnamoyl-CoA reductase, putative [Ricin | 0.857 | 0.595 | 0.768 | 2e-89 | |
| 224129534 | 330 | predicted protein [Populus trichocarpa] | 0.853 | 0.6 | 0.767 | 1e-87 | |
| 225465312 | 333 | PREDICTED: bifunctional dihydroflavonol | 0.857 | 0.597 | 0.753 | 2e-84 | |
| 297817868 | 318 | cinnamoyl-CoA reductase family [Arabidop | 0.853 | 0.622 | 0.717 | 6e-81 | |
| 15226955 | 318 | Rossmann-fold NAD(P)-binding domain-cont | 0.853 | 0.622 | 0.717 | 6e-81 | |
| 449478087 | 326 | PREDICTED: tetraketide alpha-pyrone redu | 0.853 | 0.607 | 0.728 | 2e-80 | |
| 449431910 | 326 | PREDICTED: tetraketide alpha-pyrone redu | 0.853 | 0.607 | 0.728 | 2e-80 | |
| 357448325 | 333 | Dihydroflavonol-4-reductase [Medicago tr | 0.853 | 0.594 | 0.693 | 1e-76 | |
| 356555831 | 330 | PREDICTED: bifunctional dihydroflavonol | 0.840 | 0.590 | 0.661 | 4e-69 | |
| 224285752 | 323 | unknown [Picea sitchensis] | 0.866 | 0.622 | 0.567 | 5e-66 |
| >gi|255556687|ref|XP_002519377.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223541444|gb|EEF42994.1| cinnamoyl-CoA reductase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 153/199 (76%), Positives = 182/199 (91%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH+ASP TL++PKDPEKEL++PAVQGT+NVLEAA+KF VRRVVLTSSIS++VPNPNWP
Sbjct: 85 GVFHVASPCTLEEPKDPEKELVLPAVQGTINVLEAARKFKVRRVVLTSSISALVPNPNWP 144
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
GKV DE+SWTDLD+CKS + WY +SK+LAEKAAWEFAEK+G DVVAIHP+T +GP QP
Sbjct: 145 AGKVFDESSWTDLDYCKSRQKWYPVSKSLAEKAAWEFAEKHGMDVVAIHPSTCIGPLLQP 204
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS AVLQ+LL+GSKDTQE++WLGAVHVKDVAKAQVLLFE +ASGRYLCTNGIYQF
Sbjct: 205 SLNASSAVLQQLLEGSKDTQEYHWLGAVHVKDVAKAQVLLFEAPSASGRYLCTNGIYQFG 264
Query: 182 EFAEKVSKLFPEYPIHRFV 200
+FA++VSKLFPE+P+H F+
Sbjct: 265 DFADRVSKLFPEFPVHSFI 283
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224129534|ref|XP_002328740.1| predicted protein [Populus trichocarpa] gi|222839038|gb|EEE77389.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 152/198 (76%), Positives = 179/198 (90%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH+ASP TL+DPKDP++EL++PAVQGTLNVLEAAKKF VRRVV+TSSIS++VPNP+WP
Sbjct: 81 GVFHVASPCTLEDPKDPQEELVMPAVQGTLNVLEAAKKFKVRRVVVTSSISALVPNPSWP 140
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
+ KV DE+SWTDLD+CKS + WY +SKTLAEKAAWEFA +NG DVVAIHPAT LGP QP
Sbjct: 141 REKVFDESSWTDLDYCKSRQKWYPVSKTLAEKAAWEFAGRNGMDVVAIHPATCLGPLLQP 200
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS AVLQ+LLQGS+DTQE++WLGAVHV+DVA+AQVLLFET ASGRYLCTNGIYQF
Sbjct: 201 ALNASCAVLQQLLQGSRDTQEYHWLGAVHVRDVARAQVLLFETPTASGRYLCTNGIYQFG 260
Query: 182 EFAEKVSKLFPEYPIHRF 199
+FA VS+LFPE+P+HRF
Sbjct: 261 DFAATVSRLFPEFPLHRF 278
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225465312|ref|XP_002269382.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [Vitis vinifera] gi|297739432|emb|CBI29614.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/199 (75%), Positives = 177/199 (88%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH+ASP +L+DPKDPEKELL+PAV+GT NVLEAA++F VRRVVLTSSIS++VPNP+WP
Sbjct: 84 GVFHVASPCSLEDPKDPEKELLMPAVEGTKNVLEAARRFQVRRVVLTSSISALVPNPSWP 143
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
+ETSWTDL +CKS + WY +SKTLAEKAAWEFA K+G DVVAIHPAT LG QP
Sbjct: 144 PNIPFNETSWTDLHYCKSRQKWYPVSKTLAEKAAWEFAGKHGIDVVAIHPATCLGELLQP 203
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS AVLQ+LL+GS +TQE++WLGAVHVKDVAKAQVLLFET AASGRYLCT+GIYQFA
Sbjct: 204 RLNASCAVLQQLLEGSTETQEYHWLGAVHVKDVAKAQVLLFETPAASGRYLCTDGIYQFA 263
Query: 182 EFAEKVSKLFPEYPIHRFV 200
+FAE+VSKLFPE+P+HRF+
Sbjct: 264 DFAERVSKLFPEFPVHRFI 282
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297817868|ref|XP_002876817.1| cinnamoyl-CoA reductase family [Arabidopsis lyrata subsp. lyrata] gi|297322655|gb|EFH53076.1| cinnamoyl-CoA reductase family [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 306 bits (783), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 142/198 (71%), Positives = 171/198 (86%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH+ASP TLD P +PEKEL+ PAV+GT+NVLEAAK+F VRRVV+TSSIS++VPNPNWP
Sbjct: 76 GVFHVASPCTLDPPVNPEKELVEPAVKGTINVLEAAKRFNVRRVVITSSISALVPNPNWP 135
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
+ +DE+SWTDLDFCKS + WY +SKTLAEKAAWEF+EK+GT++V IHP+T LGP QP
Sbjct: 136 ERVPVDESSWTDLDFCKSMQKWYPISKTLAEKAAWEFSEKHGTNIVTIHPSTCLGPLLQP 195
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS AVL +LLQGS +TQEH+WLG VHV+DVAK V+LFET ASGR+LCTNGIYQF+
Sbjct: 196 NLNASCAVLLQLLQGSTETQEHHWLGVVHVRDVAKGHVMLFETPEASGRFLCTNGIYQFS 255
Query: 182 EFAEKVSKLFPEYPIHRF 199
EFA VSKLFPE+ +HRF
Sbjct: 256 EFAALVSKLFPEFAVHRF 273
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15226955|ref|NP_178345.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|3894172|gb|AAC78522.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|28973736|gb|AAO64184.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|29824207|gb|AAP04064.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|110736834|dbj|BAF00375.1| putative cinnamoyl-CoA reductase [Arabidopsis thaliana] gi|330250482|gb|AEC05576.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 306 bits (783), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 142/198 (71%), Positives = 171/198 (86%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH+ASP TLD P DPEKEL+ PAV+GT+NVLEAAK+F VRRVV+TSSIS++VPNPNWP
Sbjct: 76 GVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVITSSISALVPNPNWP 135
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
+ +DE+SW+DLDFCKS + WY +SKTLAEKAAWEF+EK+GT++V IHP+T LGP QP
Sbjct: 136 EKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAWEFSEKHGTNIVTIHPSTCLGPLLQP 195
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS AVL +LLQGS +TQEH+WLG VHVKDVAK V+LFET ASGR+LCTNGIYQF+
Sbjct: 196 NLNASCAVLLQLLQGSTETQEHHWLGVVHVKDVAKGHVMLFETPDASGRFLCTNGIYQFS 255
Query: 182 EFAEKVSKLFPEYPIHRF 199
EFA VSKLFPE+ +H+F
Sbjct: 256 EFAALVSKLFPEFAVHKF 273
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449478087|ref|XP_004155219.1| PREDICTED: tetraketide alpha-pyrone reductase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/199 (72%), Positives = 172/199 (86%), Gaps = 1/199 (0%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH+ASP TL+DP DP+KEL+ PAVQGT+NVL AAKKFGVRRVVLTSSIS++VPNP WP
Sbjct: 83 GVFHIASPCTLEDPVDPQKELVEPAVQGTVNVLNAAKKFGVRRVVLTSSISALVPNPGWP 142
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
DE+SWTDL++C S K WY +SKTLAEK+AWEFAE +G DVV+I PAT LGP QP
Sbjct: 143 SHMPFDESSWTDLEYCISRKKWYPVSKTLAEKSAWEFAENHGLDVVSILPATCLGPLLQP 202
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS AVLQ+LL GS+DTQE++WLGAVHVKDVAKAQ+LLFE S SGRYLCTNGIYQF+
Sbjct: 203 TLNASCAVLQQLLHGSQDTQEYHWLGAVHVKDVAKAQILLFE-SPTSGRYLCTNGIYQFS 261
Query: 182 EFAEKVSKLFPEYPIHRFV 200
EFA+KV+K+ P++P+HRFV
Sbjct: 262 EFADKVAKICPQFPVHRFV 280
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449431910|ref|XP_004133743.1| PREDICTED: tetraketide alpha-pyrone reductase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/199 (72%), Positives = 172/199 (86%), Gaps = 1/199 (0%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH+ASP TL+DP DP+KEL+ PAVQGT+NVL AAKKFGVRRVVLTSSIS++VPNP WP
Sbjct: 83 GVFHIASPCTLEDPVDPQKELVEPAVQGTVNVLNAAKKFGVRRVVLTSSISALVPNPGWP 142
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
DE+SWTDL++C S K WY +SKTLAEK+AWEFAE +G DVV+I PAT LGP QP
Sbjct: 143 SHMPFDESSWTDLEYCISRKKWYPVSKTLAEKSAWEFAENHGLDVVSILPATCLGPLLQP 202
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS AVLQ+LL GS+DTQE++WLGAVHVKDVAKAQ+LLFE S SGRYLCTNGIYQF+
Sbjct: 203 TLNASCAVLQQLLHGSQDTQEYHWLGAVHVKDVAKAQILLFE-SPTSGRYLCTNGIYQFS 261
Query: 182 EFAEKVSKLFPEYPIHRFV 200
EFA+KV+K+ P++P+HRFV
Sbjct: 262 EFADKVAKICPQFPVHRFV 280
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357448325|ref|XP_003594438.1| Dihydroflavonol-4-reductase [Medicago truncatula] gi|355483486|gb|AES64689.1| Dihydroflavonol-4-reductase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/199 (69%), Positives = 164/199 (82%), Gaps = 1/199 (0%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH+ASP TL+DP DP+KELL PAVQGTLNVLEA+K+ GV+RVVLTSSIS++VPNPNWP
Sbjct: 83 GVFHVASPCTLEDPTDPQKELLEPAVQGTLNVLEASKRAGVKRVVLTSSISAMVPNPNWP 142
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN-GTDVVAIHPATSLGPFPQ 120
+ K IDE SWTD+++CK WY +SKT AEK AWEF EK+ G DVVA+HP T LGP Q
Sbjct: 143 ENKAIDEGSWTDVEYCKLRGKWYPVSKTEAEKVAWEFCEKHSGVDVVAVHPGTCLGPLLQ 202
Query: 121 PYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQF 180
+NAS AVLQRL+ G KDTQE YWLGAVHVKDVA+A VL++ET A+GRYLC NGIYQF
Sbjct: 203 NQMNASSAVLQRLMMGEKDTQECYWLGAVHVKDVARAHVLVYETPTAAGRYLCVNGIYQF 262
Query: 181 AEFAEKVSKLFPEYPIHRF 199
+ FA+ VS+L+ +YPIH F
Sbjct: 263 SSFAKIVSELYHDYPIHSF 281
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356555831|ref|XP_003546233.1| PREDICTED: bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/198 (66%), Positives = 163/198 (82%), Gaps = 3/198 (1%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH+ASP TL+DP DP+++LL PAVQGTLNVL AA++ GVRRVVLTSSIS++VPNP WP
Sbjct: 84 GVFHVASPCTLEDPTDPQRDLLEPAVQGTLNVLTAARRVGVRRVVLTSSISAMVPNPGWP 143
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
G+ DE SWTD+++CK WY ++KT AE+AAW F +G +VVA+ PAT LGP QP
Sbjct: 144 AGRAADEASWTDVEYCKGRGKWYPVAKTEAERAAWAF---DGVEVVAVLPATCLGPLLQP 200
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS AVL+ L+ GS++TQE++WLGAVHVKDVAKA VLL+ET A+GRYLCTNGIYQF+
Sbjct: 201 DLNASSAVLRELMMGSRETQEYHWLGAVHVKDVAKANVLLYETPTAAGRYLCTNGIYQFS 260
Query: 182 EFAEKVSKLFPEYPIHRF 199
FA VS+L+PE+PIHRF
Sbjct: 261 SFAAMVSELYPEFPIHRF 278
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224285752|gb|ACN40591.1| unknown [Picea sitchensis] | Back alignment and taxonomy information |
|---|
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 114/201 (56%), Positives = 161/201 (80%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFHLA PNT+D +DP+K+LL P ++GT+NVLEAA K V+RVVLTSS+S+I+PNP WP
Sbjct: 77 GVFHLAMPNTIDAVEDPQKQLLDPGIKGTINVLEAAHKAKVKRVVLTSSVSAIIPNPKWP 136
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
GK +DE WTDLD+C+ + IWY+++KTLAEKAAW+F+++ G +VVAI+P T+LGP P
Sbjct: 137 AGKPLDENCWTDLDYCRENGIWYTVAKTLAEKAAWDFSKEKGLNVVAINPGTALGPILPP 196
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS A++ +LLQG+K+ ++++G HVKD+AKAQ+LL+ET +ASGR+LC I ++
Sbjct: 197 DMNASLAMIVKLLQGNKEEYRNFFMGCAHVKDIAKAQILLYETPSASGRHLCVESIAHWS 256
Query: 182 EFAEKVSKLFPEYPIHRFVCV 202
+FAE +KL+PEY +H+F V
Sbjct: 257 DFAELTAKLYPEYNVHKFTGV 277
|
Source: Picea sitchensis Species: Picea sitchensis Genus: Picea Family: Pinaceae Order: Coniferales Class: Coniferopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 232 | ||||||
| TAIR|locus:2056171 | 318 | AT2G02400 [Arabidopsis thalian | 0.853 | 0.622 | 0.717 | 7.1e-77 | |
| TAIR|locus:2171258 | 324 | AT5G58490 [Arabidopsis thalian | 0.840 | 0.601 | 0.523 | 2.1e-54 | |
| TAIR|locus:2051018 | 321 | CRL2 "CCR(Cinnamoyl coA:NADP o | 0.831 | 0.601 | 0.438 | 2.3e-39 | |
| TAIR|locus:2200427 | 344 | CCR1 "cinnamoyl coa reductase | 0.818 | 0.552 | 0.456 | 2.1e-38 | |
| TAIR|locus:2033904 | 325 | AT1G51410 [Arabidopsis thalian | 0.827 | 0.590 | 0.439 | 2.1e-38 | |
| TAIR|locus:2150315 | 326 | AT5G19440 [Arabidopsis thalian | 0.827 | 0.588 | 0.439 | 4.3e-38 | |
| TAIR|locus:2122093 | 326 | DRL1 "dihydroflavonol 4-reduct | 0.849 | 0.604 | 0.407 | 7e-38 | |
| TAIR|locus:2025832 | 332 | CCR2 "cinnamoyl coa reductase" | 0.818 | 0.572 | 0.446 | 4.9e-37 | |
| TAIR|locus:2051008 | 321 | CRL1 "CCR(Cinnamoyl coA:NADP o | 0.831 | 0.601 | 0.412 | 1.7e-36 | |
| TAIR|locus:2033394 | 319 | AT1G66800 [Arabidopsis thalian | 0.801 | 0.583 | 0.412 | 2.3e-32 |
| TAIR|locus:2056171 AT2G02400 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 142/198 (71%), Positives = 171/198 (86%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH+ASP TLD P DPEKEL+ PAV+GT+NVLEAAK+F VRRVV+TSSIS++VPNPNWP
Sbjct: 76 GVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRVVITSSISALVPNPNWP 135
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
+ +DE+SW+DLDFCKS + WY +SKTLAEKAAWEF+EK+GT++V IHP+T LGP QP
Sbjct: 136 EKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAWEFSEKHGTNIVTIHPSTCLGPLLQP 195
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS AVL +LLQGS +TQEH+WLG VHVKDVAK V+LFET ASGR+LCTNGIYQF+
Sbjct: 196 NLNASCAVLLQLLQGSTETQEHHWLGVVHVKDVAKGHVMLFETPDASGRFLCTNGIYQFS 255
Query: 182 EFAEKVSKLFPEYPIHRF 199
EFA VSKLFPE+ +H+F
Sbjct: 256 EFAALVSKLFPEFAVHKF 273
|
|
| TAIR|locus:2171258 AT5G58490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 102/195 (52%), Positives = 144/195 (73%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFHLASP +D+ +DP+K+LL PAV+GT+NVL AAK+ V+RVV+TSSIS+I P+PNWP
Sbjct: 81 GVFHLASPCIVDEVQDPQKQLLDPAVKGTINVLTAAKEASVKRVVVTSSISAITPSPNWP 140
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
K+ +E W D+C+ + +WY +SKTLAEKAAWEFAE+ G DVV ++P T +GP P
Sbjct: 141 ADKIKNEECWAAEDYCRQNGLWYPLSKTLAEKAAWEFAEEKGLDVVVVNPGTVMGPVIPP 200
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS +L RLLQG +T E++++G+VH KDVA A +L++E + GR+LC I +
Sbjct: 201 SLNASMHMLLRLLQGCTETYENFFMGSVHFKDVALAHILVYEDPYSKGRHLCVEAISHYG 260
Query: 182 EFAEKVSKLFPEYPI 196
+F KV++L+P Y +
Sbjct: 261 DFVAKVAELYPNYNV 275
|
|
| TAIR|locus:2051018 CRL2 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 85/194 (43%), Positives = 126/194 (64%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH+A P +PE +L+ PAV GTLNVL+A + V+RVV SS+S++ NP W
Sbjct: 80 GVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACVEAKVKRVVYVSSVSAVAMNPMWS 139
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
+ +V+DET+W+D D+CK + WYS+SKT AE A+EFA++ G D+V++ P LGP Q
Sbjct: 140 KSQVLDETAWSDQDYCKKTENWYSLSKTRAESEAFEFAKRTGLDLVSVCPTLVLGPVLQQ 199
Query: 122 Y-VNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQF 180
+ VNAS VL +LL+ +++ + V V+DVA+A +L++E + A GRY+C +
Sbjct: 200 HTVNASSLVLLKLLKEGYESRNNQERHLVDVRDVAQALLLVYEKAEAEGRYICIGHTVRE 259
Query: 181 AEFAEKVSKLFPEY 194
E AEK+ L+ Y
Sbjct: 260 QEVAEKLKSLYLNY 273
|
|
| TAIR|locus:2200427 CCR1 "cinnamoyl coa reductase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 89/195 (45%), Positives = 122/195 (62%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH ASP T DDP+ +++ PAV G V+ AA + V+RVV+TSSI ++ +PN
Sbjct: 84 GVFHTASPVT-DDPE----QMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRD 138
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
V+DE+ W+DLDFCK+ K WY K +AE+AAWE A++ G D+V ++P LGP QP
Sbjct: 139 PEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQP 198
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS + + L GS T + V V+DVA A VL++E +ASGRYL
Sbjct: 199 TINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASGRYLLAESARHRG 258
Query: 182 EFAEKVSKLFPEYPI 196
E E ++KLFPEYP+
Sbjct: 259 EVVEILAKLFPEYPL 273
|
|
| TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 87/198 (43%), Positives = 128/198 (64%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAA-KKFGVRRVVLTSSISSIVPN--P 58
GVFH ASP D KDP+ ELL PAV+GT+NVL + K V+RVVLTSSI+++ N P
Sbjct: 81 GVFHTASP-FYHDVKDPQAELLDPAVKGTINVLSSCLKTSSVKRVVLTSSIAAVAFNGMP 139
Query: 59 NWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 118
P+ ++DET + D D+C++ K+WY +SKTLAE AAW+FA++N +V+I+PA +GP
Sbjct: 140 RTPE-TIVDETWFADPDYCRASKLWYVLSKTLAENAAWKFAKENNLQLVSINPAMVIGPL 198
Query: 119 PQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIY 178
QP +N S A + L++G++ T + G V+VKDVA A + FE A GRY +
Sbjct: 199 LQPTLNTSAAAVLSLIKGAQ-TFPNATFGWVNVKDVANAHIQAFENPDADGRYCLVERVA 257
Query: 179 QFAEFAEKVSKLFPEYPI 196
++E + L+P++ +
Sbjct: 258 HYSEVVNILHDLYPDFQL 275
|
|
| TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 87/198 (43%), Positives = 127/198 (64%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPN--P 58
GVFH ASP +D KDP+ EL+ PAV+GTLNVL + AK V+RVV+TSS++++ N P
Sbjct: 82 GVFHTASP-FFNDAKDPQAELIDPAVKGTLNVLNSCAKASSVKRVVVTSSMAAVGYNGKP 140
Query: 59 NWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 118
P +DET ++D + C++ K+WY +SKTLAE AAW+ A++ G D+V I+PA +GP
Sbjct: 141 RTPD-VTVDETWFSDPELCEASKMWYVLSKTLAEDAAWKLAKEKGLDIVTINPAMVIGPL 199
Query: 119 PQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIY 178
QP +N S A + L+ G+K T + G V+VKDVA A + FE +A+GRY +
Sbjct: 200 LQPTLNTSAAAILNLINGAK-TFPNLSFGWVNVKDVANAHIQAFEVPSANGRYCLVERVV 258
Query: 179 QFAEFAEKVSKLFPEYPI 196
+E + +L+P P+
Sbjct: 259 HHSEIVNILRELYPNLPL 276
|
|
| TAIR|locus:2122093 DRL1 "dihydroflavonol 4-reductase-like1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 82/201 (40%), Positives = 130/201 (64%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNW 60
GVFH ASP L +PE+E+L PA++GTLNVL + +K ++RVVLTSS S++ ++
Sbjct: 80 GVFHTASP-VLKPTSNPEEEILRPAIEGTLNVLRSCRKNPSLKRVVLTSSSSTVRIRDDF 138
Query: 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQ 120
+DE+ WT ++ CK ++WY++SKTLAE+AAW+F+E+NG D+V + P+ +GP
Sbjct: 139 DPKIPLDESIWTSVELCKRFQVWYALSKTLAEQAAWKFSEENGIDLVTVLPSFLVGPSLP 198
Query: 121 PYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQ 179
P + ++ + + LL+G + Q H +G VH+ DVA+ +++FE AA GRY+C++ +
Sbjct: 199 PDLCSTASDVLGLLKGETEKFQWHGQMGYVHIDDVARTHIVVFEHEAAQGRYICSSNVIS 258
Query: 180 FAEFAEKVSKLFPEYPI-HRF 199
E +S +P PI RF
Sbjct: 259 LEELVSFLSARYPSLPIPKRF 279
|
|
| TAIR|locus:2025832 CCR2 "cinnamoyl coa reductase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 87/195 (44%), Positives = 116/195 (59%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH ASP T DDP+ +L PAV G V++AA K V+RVV TSSI ++ NPN
Sbjct: 79 GVFHTASPMT-DDPET----MLEPAVNGAKFVIDAAAKAKVKRVVFTSSIGAVYMNPNRD 133
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
++DE W+DLDFCK+ K WY K LAE++AWE A+ G D+V ++P LGP Q
Sbjct: 134 TQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKGVDLVVLNPVLVLGPPLQS 193
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS + + L GS T + V V+DVA VL++E +ASGRY+
Sbjct: 194 AINASLVHILKYLTGSAKTYANLTQVYVDVRDVALGHVLVYEAPSASGRYILAETALHRG 253
Query: 182 EFAEKVSKLFPEYPI 196
E E ++K FPEYP+
Sbjct: 254 EVVEILAKFFPEYPL 268
|
|
| TAIR|locus:2051008 CRL1 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 80/194 (41%), Positives = 121/194 (62%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH+A P +PE EL+ PAV GTLNVL+A + V+RVV SS+++ NP W
Sbjct: 80 GVFHVACPVPPASVPNPEVELIAPAVDGTLNVLKACIEANVKRVVYVSSVAAAFMNPMWS 139
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF-PQ 120
+ +V+DE W+D ++CK + WY ++KT AE A+EFA++ G +V++ P LGP Q
Sbjct: 140 KNQVLDEACWSDQEYCKKTENWYCLAKTRAESEAFEFAKRTGLHLVSVCPTLVLGPILQQ 199
Query: 121 PYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQF 180
VNAS VL +LL+ +T+++ V V+DVA+A +L++E + A GRY+CT+ +
Sbjct: 200 NTVNASSLVLLKLLKEGFETRDNQERHLVDVRDVAQALLLVYEKAEAEGRYICTSHTVKE 259
Query: 181 AEFAEKVSKLFPEY 194
EK+ +P Y
Sbjct: 260 EIVVEKLKSFYPHY 273
|
|
| TAIR|locus:2033394 AT1G66800 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 80/194 (41%), Positives = 117/194 (60%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVP-NPN 59
GVFH ASP +L DP+ E++ PAV GTLNVL AK V+RV++TSS ++ + NPN
Sbjct: 80 GVFHTASPVSLT-VTDPQTEMIDPAVNGTLNVLRTCAKVSSVKRVIVTSSTAATLSINPN 138
Query: 60 WPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFP 119
V+DET +TDL + K WY SKTLAE+ AW FA++NG D+V ++P +GP
Sbjct: 139 ----DVVDETVFTDLSVYLAMKAWYGYSKTLAEETAWRFAKENGIDLVVMNPGNVIGPVL 194
Query: 120 QPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQ 179
QP +N S V+ L+ G + Y+ + V+DV+ A + FE +ASGRY+ +
Sbjct: 195 QPTLNYSVEVIVDLINGKNPSNSFYYR-FMDVRDVSLAHIKAFEVPSASGRYILADPDVT 253
Query: 180 FAEFAEKVSKLFPE 193
+ + + +LFP+
Sbjct: 254 MKDIQKLLHELFPD 267
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 232 | |||
| cd08958 | 293 | cd08958, FR_SDR_e, flavonoid reductase (FR), exten | 3e-98 | |
| PLN02662 | 322 | PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase | 1e-58 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 3e-57 | |
| PLN02214 | 342 | PLN02214, PLN02214, cinnamoyl-CoA reductase | 2e-49 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 5e-42 | |
| PLN02650 | 351 | PLN02650, PLN02650, dihydroflavonol-4-reductase | 3e-41 | |
| PLN02989 | 325 | PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase | 7e-41 | |
| PLN02986 | 322 | PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase | 6e-40 | |
| PLN00198 | 338 | PLN00198, PLN00198, anthocyanidin reductase; Provi | 6e-39 | |
| PLN02896 | 353 | PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | 9e-30 | |
| PLN02583 | 297 | PLN02583, PLN02583, cinnamoyl-CoA reductase | 2e-28 | |
| PLN02686 | 367 | PLN02686, PLN02686, cinnamoyl-CoA reductase | 7e-26 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 7e-26 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 2e-24 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 2e-19 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 3e-19 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 5e-13 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 5e-12 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 3e-11 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 6e-11 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 2e-09 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 7e-09 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 1e-08 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 3e-08 | |
| TIGR04180 | 297 | TIGR04180, EDH_00030, NAD dependent epimerase/dehy | 6e-06 | |
| cd09811 | 354 | cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD | 1e-05 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 3e-05 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 4e-05 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 4e-05 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 2e-04 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 2e-04 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 3e-04 | |
| cd05230 | 305 | cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase | 7e-04 | |
| cd05238 | 305 | cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n | 0.001 | |
| pfam02719 | 280 | pfam02719, Polysacc_synt_2, Polysaccharide biosynt | 0.003 | |
| cd05262 | 291 | cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | 0.003 | |
| smart00822 | 180 | smart00822, PKS_KR, This enzymatic domain is part | 0.003 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 0.003 | |
| cd08957 | 307 | cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic | 0.003 | |
| cd09812 | 339 | cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid | 0.004 | |
| COG1086 | 588 | COG1086, COG1086, Predicted nucleoside-diphosphate | 0.004 | |
| pfam08659 | 181 | pfam08659, KR, KR domain | 0.004 |
| >gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 287 bits (737), Expect = 3e-98
Identities = 102/197 (51%), Positives = 146/197 (74%), Gaps = 2/197 (1%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNW 60
GVFH+ASP D +DPE+E++ PAV+GTLNVLEA K V+RVV TSS++++V NPN
Sbjct: 73 GVFHVASPVD-FDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVFTSSVAAVVWNPNR 131
Query: 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQ 120
+GKV+DE+ W+DLDFCK K+WY++SKTLAEKAAWEFAE+NG D+V ++P+ +GPF Q
Sbjct: 132 GEGKVVDESCWSDLDFCKKTKLWYALSKTLAEKAAWEFAEENGLDLVTVNPSLVVGPFLQ 191
Query: 121 PYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQF 180
P +N+S ++ LL+G+ + ++ L VHV DVA A +LL+E +ASGRY+C++ +
Sbjct: 192 PSLNSSSQLILSLLKGNAEMYQNGSLALVHVDDVADAHILLYEKPSASGRYICSSHVVTR 251
Query: 181 AEFAEKVSKLFPEYPIH 197
E A ++K +P+Y I
Sbjct: 252 PELAALLAKKYPQYNIP 268
|
This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 187 bits (478), Expect = 1e-58
Identities = 85/198 (42%), Positives = 125/198 (63%), Gaps = 6/198 (3%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPN--P 58
GVFH ASP D DP+ EL+ PAV+GTLNVL + K V+RVV+TSS++++ N P
Sbjct: 79 GVFHTASP-FYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKP 137
Query: 59 NWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 118
P V+DET ++D FC+ K+WY +SKTLAE+AAW+FA++NG D+V I+PA +GP
Sbjct: 138 LTP-DVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPL 196
Query: 119 PQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIY 178
QP +N S + L+ G++ T + V V+DVA A + FE +ASGRY +
Sbjct: 197 LQPTLNTSAEAILNLINGAQ-TFPNASYRWVDVRDVANAHIQAFEIPSASGRYCLVERVV 255
Query: 179 QFAEFAEKVSKLFPEYPI 196
++E + + +L+P +
Sbjct: 256 HYSEVVKILHELYPTLQL 273
|
Length = 322 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 183 bits (467), Expect = 3e-57
Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 8/200 (4%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNW 60
V H+ASP D E +++ PAV+GTLNVLEAAK G V+RVVLTSS++++
Sbjct: 75 YVIHVASP-FPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSVKRVVLTSSVAAVGDPTAE 133
Query: 61 PQGKVIDETSWTDLDFCKSHKIW-YSMSKTLAEKAAWEFAEKNGT--DVVAIHPATSLGP 117
GKV E W DL KS+ + Y SKTLAEKAAWEF ++N +++ I+P LGP
Sbjct: 134 DPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKENKPKFELITINPGYVLGP 193
Query: 118 -FPQPYVNASGAVLQRLLQGSKDTQ-EHYWLGAVHVKDVAKAQVLLFETSAASG-RYLCT 174
+N+S ++ +LL G + G V V+DVA A V E+ A+G R++ +
Sbjct: 194 SLLADELNSSNELINKLLDGKLPAIPPNLPFGYVDVRDVADAHVRALESPEAAGQRFIVS 253
Query: 175 NGIYQFAEFAEKVSKLFPEY 194
G + F E A+ + + FP+
Sbjct: 254 AGPFSFQEIADLLREEFPQL 273
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 164 bits (416), Expect = 2e-49
Identities = 89/195 (45%), Positives = 122/195 (62%), Gaps = 5/195 (2%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GVFH ASP T DDP+ +++ PAV G V+ AA + V+RVV+TSSI ++ +PN
Sbjct: 84 GVFHTASPVT-DDPE----QMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRD 138
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
V+DE+ W+DLDFCK+ K WY K +AE+AAWE A++ G D+V ++P LGP QP
Sbjct: 139 PEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQP 198
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+NAS + + L GS T + V V+DVA A VL++E +ASGRYL
Sbjct: 199 TINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPSASGRYLLAESARHRG 258
Query: 182 EFAEKVSKLFPEYPI 196
E E ++KLFPEYP+
Sbjct: 259 EVVEILAKLFPEYPL 273
|
Length = 342 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 143 bits (363), Expect = 5e-42
Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 10/203 (4%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNW 60
GVFH+A+P + KDP E++ PA+ GTLN L+AA V+R VLTSS S++
Sbjct: 73 GVFHVATPVSFSS-KDPN-EVIKPAIGGTLNALKAAAAAKSVKRFVLTSSAGSVLIPKPN 130
Query: 61 PQGKVIDETSWTDLDFCKS--HKIW-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGP 117
+G V+DE SW +F W Y+ SKTLAEKAAW+FA++N D++ + P ++G
Sbjct: 131 VEGIVLDEKSWNLEEFDSDPKKSAWVYAASKTLAEKAAWKFADENNIDLITVIPTLTIGT 190
Query: 118 FPQPYVNASGAVLQRLLQGSKDTQEHYWLGA----VHVKDVAKAQVLLFETSAASGRYLC 173
+S L+ G++ L VHV D+ A + E A GRY+C
Sbjct: 191 IFDSETPSSSGWAMSLITGNEGVSPALALIPPGYYVHVVDICLAHIGCLELPIARGRYIC 250
Query: 174 TNGIYQFAEFAEKVSKLFPEYPI 196
T G + + + + K +P Y
Sbjct: 251 TAGNFDWNTLLKTLRKKYPSYTF 273
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Score = 143 bits (362), Expect = 3e-41
Identities = 80/205 (39%), Positives = 117/205 (57%), Gaps = 18/205 (8%)
Query: 2 GVFHLASPNTLD-DPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPN 59
GVFH+A+P +D + KDPE E++ P V G L++++A K VRR+V TSS ++ N
Sbjct: 80 GVFHVATP--MDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTV--NVE 135
Query: 60 WPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLG 116
Q V DE W+DLDFC+ K+ W Y +SKTLAEKAAW++A +NG D ++I P +G
Sbjct: 136 EHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVG 195
Query: 117 PF-----PQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRY 171
PF P + A + S Q + VH+ D+ A + LFE AA GRY
Sbjct: 196 PFISTSMPPSLITALSLITGNEAHYSIIKQGQF----VHLDDLCNAHIFLFEHPAAEGRY 251
Query: 172 LCTNGIYQFAEFAEKVSKLFPEYPI 196
+C++ + A+ + + +PEY I
Sbjct: 252 ICSSHDATIHDLAKMLREKYPEYNI 276
|
Length = 351 |
| >gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 7e-41
Identities = 78/198 (39%), Positives = 114/198 (57%), Gaps = 7/198 (3%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIV-PNPNW 60
VFH ASP + DP+ EL+ PAV GT+NVL K V+RV+LTSS+++++ P
Sbjct: 81 VFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKL 140
Query: 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQ 120
V+DET +T+ F + K WY +SKTLAE AAW FA+ N D++ ++P GP Q
Sbjct: 141 GPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQ 200
Query: 121 PYVNASGAVLQRLLQGSK--DTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIY 178
P +N S AV+ L++G +T H + V V+DVA A V ET +A+GRY+ +
Sbjct: 201 PTLNFSVAVIVELMKGKNPFNTTHHRF---VDVRDVALAHVKALETPSANGRYIIDGPVV 257
Query: 179 QFAEFAEKVSKLFPEYPI 196
+ + + FP+ I
Sbjct: 258 TIKDIENVLREFFPDLCI 275
|
Length = 325 |
| >gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 139 bits (351), Expect = 6e-40
Identities = 76/197 (38%), Positives = 113/197 (57%), Gaps = 4/197 (2%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVP-NPN 59
VFH ASP KDP+ EL+ PA++GT+NVL K+ V+RV+LTSS ++++ P
Sbjct: 80 AVFHTASP-VFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPP 138
Query: 60 WPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFP 119
V+DET ++D C+ K WY +SK LAE AAWEFA+ NG D+V ++P GP
Sbjct: 139 IEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLL 198
Query: 120 QPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQ 179
QP +N S ++ + G ++ V V+DVA A + ET +A+GRY+ I
Sbjct: 199 QPTLNFSVELIVDFINGKNLFNNRFYR-FVDVRDVALAHIKALETPSANGRYIIDGPIMS 257
Query: 180 FAEFAEKVSKLFPEYPI 196
+ + + +LFP+ I
Sbjct: 258 VNDIIDILRELFPDLCI 274
|
Length = 322 |
| >gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 6e-39
Identities = 77/206 (37%), Positives = 118/206 (57%), Gaps = 13/206 (6%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNPNWP 61
VFH+A+P +DPE +++ PA+QG NVL+A AK V+RV+LTSS +++ N
Sbjct: 84 VFHVATPVNFAS-EDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSG 142
Query: 62 QGKVIDETSWTDLDFCKSHK--IW-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 118
G V++E +WTD++F S K W Y SKTLAEKAAW+FAE+N D++ + P GP
Sbjct: 143 TGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPS 202
Query: 119 PQPYVNASGAVLQRLLQGSK----DTQEHYWLGA----VHVKDVAKAQVLLFETSAASGR 170
+ +S ++ L+ G++ + L HV+DV +A + L E +ASGR
Sbjct: 203 LTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESASGR 262
Query: 171 YLCTNGIYQFAEFAEKVSKLFPEYPI 196
Y+C E A+ + K +P+Y +
Sbjct: 263 YICCAANTSVPELAKFLIKRYPQYQV 288
|
Length = 338 |
| >gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 9e-30
Identities = 75/215 (34%), Positives = 116/215 (53%), Gaps = 28/215 (13%)
Query: 2 GVFHLA-------SPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISS 53
GVFH+A S + + + + +++ PA++GTLNVL++ K V+RVV TSSIS+
Sbjct: 82 GVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSIST 141
Query: 54 IVP---NPNWPQGKVIDETSWTDLDFCKSHKI--W-YSMSKTLAEKAAWEFAEKNGTDVV 107
+ N W V+DET T +D + K W Y +SK L E+AA+++A++NG D+V
Sbjct: 142 LTAKDSNGRWRA--VVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLV 199
Query: 108 AIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV----------HVKDVAKA 157
++ T GPF P V +S VL + G D++ L AV H++D+ A
Sbjct: 200 SVITTTVAGPFLTPSVPSSIQVLLSPITG--DSKLFSILSAVNSRMGSIALVHIEDICDA 257
Query: 158 QVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLFP 192
+ L E + A GRY+C Y +E +SK +P
Sbjct: 258 HIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYP 292
|
Length = 353 |
| >gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 2e-28
Identities = 64/197 (32%), Positives = 97/197 (49%), Gaps = 20/197 (10%)
Query: 11 TLDDPKD--PEKELLIPA-VQGTLNVLEA-AKKFGVRRVVLTSSISSIVPNP-NWPQGKV 65
D P D E ++ V+ NVLEA A+ + +VV TSS+++++ N K
Sbjct: 85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKD 144
Query: 66 IDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGP---FPQPY 122
+DE SW+D +FC+ K+W++++KTL+EK AW A G ++V+I+ +GP PY
Sbjct: 145 VDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPY 204
Query: 123 VNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFAE 182
L+G+ E+ L V V + A + FE ++ GRYLC N I E
Sbjct: 205 -----------LKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNTEE 253
Query: 183 FAEK-VSKLFPEYPIHR 198
A K L P P
Sbjct: 254 DAVKLAQMLSPLIPSPP 270
|
Length = 297 |
| >gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 7e-26
Identities = 66/201 (32%), Positives = 99/201 (49%), Gaps = 23/201 (11%)
Query: 2 GVFHLASPNTLDDP---KDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVPN 57
GVFH ++ DP K + + + NV+EA + VR+ V TSS+ + V
Sbjct: 131 GVFHTSA---FVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWR 187
Query: 58 PNWPQG--KVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSL 115
N+P VIDE SW+D FC+ +K+WY++ K AEKAAW A G + I PA
Sbjct: 188 QNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVT 247
Query: 116 GP-FPQPYVNASGAVLQRLLQGSKDTQEHY---WLGAVHVKDVAKAQVLLFE---TSAAS 168
GP F + A+ A L K QE L V+ +A+A V ++E A
Sbjct: 248 GPGFFRRNSTATIAYL-------KGAQEMLADGLLATADVERLAEAHVCVYEAMGNKTAF 300
Query: 169 GRYLCTNGIYQFAEFAEKVSK 189
GRY+C + + + AE++++
Sbjct: 301 GRYICFDHVVSREDEAEELAR 321
|
Length = 367 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 7e-26
Identities = 59/200 (29%), Positives = 86/200 (43%), Gaps = 20/200 (10%)
Query: 3 VFHLASPNTLDDPKDPE-KELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
V HLA+ +++ D + E L V GTLN+LEAA+ GV+R V SS+S + + P
Sbjct: 68 VIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGD---P 124
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
IDE Y +SK AE+ +A G VV + P GP +P
Sbjct: 125 PPLPIDEDLGPPRPL-----NPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKP 179
Query: 122 YVNASGAVLQRLLQGSKDTQ-------EHYWLGAVHVKDVAKAQVLLFETSAASGRYLCT 174
+ +SG V + Q K V+V DVA A +L E + G +
Sbjct: 180 DL-SSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALE-NPDGGVFNIG 237
Query: 175 NGIYQ--FAEFAEKVSKLFP 192
+G + E AE V++
Sbjct: 238 SGTAEITVRELAEAVAEAVG 257
|
Length = 314 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 98.1 bits (245), Expect = 2e-24
Identities = 67/215 (31%), Positives = 92/215 (42%), Gaps = 27/215 (12%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQ 62
VFHLA+ T KD KEL V+GT NVL+AA + GVRRVV TSSI+++ P
Sbjct: 66 VFHLAA-FTSLWAKDR-KELYRTNVEGTRNVLDAALEAGVRRVVHTSSIAALGGPP---- 119
Query: 63 GKVIDETS-WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
IDET+ W + F Y SK LAE E A + G DVV ++P+ GP
Sbjct: 120 DGRIDETTPWNERPFPND----YYRSKLLAELEVLEAAAE-GLDVVIVNPSAVFGPG--D 172
Query: 122 YVNASG-----AVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNG 176
S L L V V+DVA+ + E RY+
Sbjct: 173 EGPTSTGLDVLDYLNGKLPAYPPG----GTSFVDVRDVAEGHIAAMEKGRRGERYILGGE 228
Query: 177 IYQFAEFAEKVSKLF----PEYPIHRFVCVCLGYL 207
F + E ++++ P I ++ + L
Sbjct: 229 NLSFKQLFETLAEITGVKPPRRTIPPWLLKAVAAL 263
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 84.7 bits (210), Expect = 2e-19
Identities = 66/177 (37%), Positives = 92/177 (51%), Gaps = 23/177 (12%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQ 62
+FH+A+ L P DPE E+ V+GT N+L AA + GV RVV TSS++++ +
Sbjct: 68 LFHVAADYRLWAP-DPE-EMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGD--- 122
Query: 63 GKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF---P 119
G DET+ + LD H Y SK LAE+AA E A + G VV ++P+T +GP P
Sbjct: 123 GTPADETTPSSLDDMIGH---YKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKP 179
Query: 120 QPYVNASGAVLQRLLQGSK----DTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYL 172
P +G ++ L G DT L VHV DVA+ +L E RY+
Sbjct: 180 TP----TGRIIVDFLNGKMPAYVDTG----LNLVHVDDVAEGHLLALERGRIGERYI 228
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 81.6 bits (202), Expect = 3e-19
Identities = 49/175 (28%), Positives = 72/175 (41%), Gaps = 20/175 (11%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQ 62
V HLA+ + D E V GTLN+LEAA+K GV+R V SS +S+ +P
Sbjct: 34 VVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAGVKRFVYASS-ASVYGSPEG-- 90
Query: 63 GKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY 122
+E + Y +SK AE + E G VV + A GP +P
Sbjct: 91 -LPEEEETPPRPLSP------YGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPR 143
Query: 123 VNAS-GAVLQRLLQGSK------DTQEHYWLGAVHVKDVAKAQVLLFETSAASGR 170
++ ++R L+G Q + +HV DV +A + E G
Sbjct: 144 LDGVVNDFIRRALEGKPLTVFGGGNQTRDF---IHVDDVVRAILHALENPLEGGG 195
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 65.8 bits (161), Expect = 5e-13
Identities = 50/181 (27%), Positives = 74/181 (40%), Gaps = 29/181 (16%)
Query: 3 VFHLA----SPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNP 58
V HLA + +DP D + V GTL +LEAA++ GV+R V SS S + +
Sbjct: 67 VIHLAAQSGVGASFEDPADFIRA----NVLGTLRLLEAARRAGVKRFVFASS-SEVYGDV 121
Query: 59 NWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 118
P I E T L Y+ +K AE+ +A G V + GP
Sbjct: 122 ADPP---ITED--TPLGPLSP----YAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPG 172
Query: 119 PQPYVNAS--GAVLQRLLQGSKD------TQEHYWLGAVHVKDVAKAQVLLFETSAASGR 170
A+++R+L+G TQ + ++V DVA+A +L E
Sbjct: 173 NPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDF---LYVDDVARAILLALEHPDGGEI 229
Query: 171 Y 171
Y
Sbjct: 230 Y 230
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 5e-12
Identities = 59/212 (27%), Positives = 84/212 (39%), Gaps = 51/212 (24%)
Query: 3 VFHLAS----PNTLDDP-KDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPN 57
VFH A+ P +++DP KD E +L GTLN+LEAA+K GV+R V SS S
Sbjct: 70 VFHQAAQASVPRSIEDPIKDHEVNVL-----GTLNLLEAARKAGVKRFVYASSSSVYGDP 124
Query: 58 PNWPQGKVIDETSWTDLDFCKSHKIW----YSMSKTLAEKAAWEFAEKNGTDVVAIHPAT 113
P P DE H Y++SK E FA G V++
Sbjct: 125 PYLP----KDED----------HPPNPLSPYAVSKYAGELYCQVFARLYGLPTVSLRYFN 170
Query: 114 SLGPFPQP---YVNASGAVLQRLLQG-----------SKDTQEHYWLGAVHVKDVAKAQV 159
GP P Y ++R L+G ++D +V+DV +A +
Sbjct: 171 VYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDF--------TYVEDVVEANL 222
Query: 160 LLFETSAASGRY-LCTNGIYQFAEFAEKVSKL 190
L A Y + T E AE + ++
Sbjct: 223 LAATAGAGGEVYNIGTGKRTSVNELAELIREI 254
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 61.7 bits (150), Expect = 3e-11
Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 39/236 (16%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQ 62
VFH A+ L P+D E+ V GT NVL+A ++ GV++ V TSS S I N
Sbjct: 70 VFHTAAIVPLAGPRDLYWEV---NVGGTQNVLDACQRCGVQKFVYTSSSSVIFGGQNIHN 126
Query: 63 GKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY 122
G DET Y+ +K +AE E ++ A+ PA GP Q
Sbjct: 127 G---DET-LPYPP---LDSDMYAETKAIAEIIVLEANGRDDLLTCALRPAGIFGPGDQ-- 177
Query: 123 VNASGAVLQRLLQGSKDTQEHYWLGA-------VHVKDVAKAQVL----LFETSAASGR- 170
++ L + ++ + G +V ++A A +L L + SG+
Sbjct: 178 -----GLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLAHAHILAAAALVKGKTISGQT 232
Query: 171 YLCTNG--IYQFAEF------AEKVSKLFPEYPIHRFVCVCLGYLYFVNTWIFNFF 218
Y T+ F S+ P+ + + C L + +++ +
Sbjct: 233 YFITDAEPHNMFELLRPVWKALGFGSR--PKIRLSGPLAYCAALLSELVSFMLGPY 286
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 6e-11
Identities = 35/132 (26%), Positives = 46/132 (34%), Gaps = 40/132 (30%)
Query: 3 VFHLASPNTLDDP-KDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSI---------- 51
VFHLA+ + P + V GTLNVLEAA +RVV TS+
Sbjct: 72 VFHLAALIAIPYSYTAPL-SYVETNVFGTLNVLEAACVLYRKRVVHTSTSEVYGTAQDVP 130
Query: 52 ------SSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTD 105
+ P P YS SK A++ A+ + G
Sbjct: 131 IDEDHPLLYINKPRSP----------------------YSASKQGADRLAYSYGRSFGLP 168
Query: 106 VVAIHPATSLGP 117
V I P + GP
Sbjct: 169 VTIIRPFNTYGP 180
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 2e-09
Identities = 55/208 (26%), Positives = 85/208 (40%), Gaps = 32/208 (15%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQ 62
V H A+ + K ++ V+GT NVL+A K GVR +V TSS+ + PN
Sbjct: 70 VIHTAAIIDVFG-KAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTSSMEVVGPN---SY 125
Query: 63 GKVI---DETSWTDLDFCKSHKIWYSMSKTLAEK---AAWEFAEKNGTD--VVAIHPATS 114
G+ I DET+ + +H+ Y SK LAEK A KNG A+ PA
Sbjct: 126 GQPIVNGDETTPYES----THQDPYPESKALAEKLVLKANGSTLKNGGRLYTCALRPAGI 181
Query: 115 LGP---FPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLL-------FET 164
G F P++ + V+V +VA A +L +
Sbjct: 182 FGEGDPFLFPFLVRLLKNGLAKFRTGDKNVLSDR---VYVGNVAWAHILAARALQDPKKA 238
Query: 165 SAASGR-YLCTNG--IYQFAEFAEKVSK 189
S+ +G+ Y ++ + +F + K
Sbjct: 239 SSIAGQFYFISDDTPHNSYDDFNRTLLK 266
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 7e-09
Identities = 40/185 (21%), Positives = 64/185 (34%), Gaps = 25/185 (13%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAV--QGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNW 60
V HLA+ + + + + V + T + AA + GV+R V SS+ N
Sbjct: 61 VVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVFLSSVKV---NGEG 117
Query: 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQ 120
G DET + Y SK AE+A E +G +VV + P GP
Sbjct: 118 TVGAPFDETDPPA---PQDA---YGRSKLEAERALLELGASDGMEVVILRPPMVYGP--- 168
Query: 121 PYVNASGAVLQRLLQGSKD------TQEHYWLGAVHVKDVAKAQVLLFETSAASGR-YLC 173
RL++ V + ++ A L A+ +L
Sbjct: 169 ----GVRGNFARLMRLIDRGLPLPPGAVKNRRSLVSLDNLVDAIYLCISLPKAANGTFLV 224
Query: 174 TNGIY 178
++G
Sbjct: 225 SDGPP 229
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 1e-08
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 48/231 (20%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQ 62
VFH ASP+ + K VQGT NV+EA +K GV+++V TSS +S+V N
Sbjct: 71 VFHTASPDHGSNDDLYYK----VNVQGTRNVIEACRKCGVKKLVYTSS-ASVVFN----- 120
Query: 63 GKVI---DETSWTDLDFCKSHKIWYSMSKTLAEKAAWEF-AEKNGTDVVAIHPATSLGPF 118
G+ I DE+ L + H+ Y+ +K LAEK + ++G A+ PA GP
Sbjct: 121 GQDIINGDES----LPYPDKHQDAYNETKALAEKLVLKANDPESGLLTCALRPAGIFGPG 176
Query: 119 PQPYVNASGAVLQRLLQGSKDTQEHYWLGA-------VHVKDVAKAQVLLFE-------- 163
+ V LL+ +K+ + + +G +V++VA A +L +
Sbjct: 177 DRQLVPG-------LLKAAKNGKTKFQIGDGNNLFDFTYVENVAHAHILAADALLSSSHA 229
Query: 164 TSAASGRYLCTNG--IYQFAEFAEKVSKLF-----PEYPIHRFVCVCLGYL 207
+ A + TN IY F +FA + + P + R V + L L
Sbjct: 230 ETVAGEAFFITNDEPIY-FWDFARAIWEGLGYERPPSIKLPRPVALYLASL 279
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 3e-08
Identities = 41/205 (20%), Positives = 70/205 (34%), Gaps = 37/205 (18%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQ 62
V H A+ D + P ++ + GT +VLE A + ++R S+
Sbjct: 80 VIHCAA---SYDFQAPNEDAWRTNIDGTEHVLELAARLDIQRFHYVSTAYVAGNREGN-- 134
Query: 63 GKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY 122
T+L+ ++ K Y SK AE+ A + V P+ +G
Sbjct: 135 ------IRETELNPGQNFKNPYEQSKAEAEQLVRAAATQIPLTV--YRPSIVVGD----- 181
Query: 123 VNASGAVLQ-----RLLQGSKDTQE--------HYWLGAVHVKDVAKAQVLLFETSAASG 169
+ +G + + LL L V V VA A V L + A+G
Sbjct: 182 -SKTGRIEKIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVDYVADAIVYLSKKPEANG 240
Query: 170 R-YLCTNGIYQ----FAEFAEKVSK 189
+ + T+ Q A+ +
Sbjct: 241 QIFHLTDPTPQTLREIADLFKSAFL 265
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 6e-06
Identities = 41/134 (30%), Positives = 53/134 (39%), Gaps = 48/134 (35%)
Query: 3 VFHLA----------SPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSS-- 50
VFHLA +P++ D V GTLNVL+AA+ GV +VV TS+
Sbjct: 74 VFHLAALIAIPYSYIAPDSYVDTN----------VTGTLNVLQAARDLGVEKVVHTSTSE 123
Query: 51 ---ISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIW----YSMSKTLAEKAAWEFAEKNG 103
+ VP IDE H + YS SK A++ A F
Sbjct: 124 VYGTAQYVP---------IDEK----------HPLQGQSPYSASKIGADQLALSFYRSFN 164
Query: 104 TDVVAIHPATSLGP 117
T V I P + GP
Sbjct: 165 TPVTIIRPFNTYGP 178
|
This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297 |
| >gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 1e-05
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPA-VQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNW 60
V H A+ +D P E L V GT VLEA + V+R+V TSSI PN
Sbjct: 75 VVIHTAA--IVDVFGPPNYEELEEVNVNGTQAVLEACVQNNVKRLVYTSSIEVAGPN--- 129
Query: 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKA 94
+G+ I D + + Y+ SK LAE
Sbjct: 130 FKGRPI-FNGVEDTPYEDTSTPPYASSKLLAENI 162
|
This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 3e-05
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 3 VFHLAS-PNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSS 50
VFHLA+ P+ DP+ L V T NVLEA + GV+R+V SS
Sbjct: 71 VFHLAANPDVRLGATDPD-IDLEENVLATYNVLEAMRANGVKRIVFASS 118
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 4e-05
Identities = 41/120 (34%), Positives = 52/120 (43%), Gaps = 16/120 (13%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSI---SSIVPNP 58
V HLA LD P+D + I V GT NVL+A GV RVV+TSS+ + NP
Sbjct: 65 AVVHLAF--ILDPPRDGAERHRI-NVDGTQNVLDACAAAGVPRVVVTSSVAVYGAHPDNP 121
Query: 59 NWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN-GTDVVAIHPATSLGP 117
T L YS K E+ EF ++ +V + PAT LGP
Sbjct: 122 AP-------LTEDAPLRGSPEFA--YSRDKAEVEQLLAEFRRRHPELNVTVLRPATILGP 172
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 4e-05
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 2 GVFHLA---SPNTLDDPKDPE--KELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVP 56
GV H A L K E + +L P V G LN+ +A + VL SS+S+
Sbjct: 291 GVIHAAGVLRDALLAQ-KTAEDFEAVLAPKVDGLLNLAQALADEPLDFFVLFSSVSAFFG 349
Query: 57 NP 58
Sbjct: 350 GA 351
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 2e-04
Identities = 31/143 (21%), Positives = 47/143 (32%), Gaps = 34/143 (23%)
Query: 28 QGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMS 87
G +N+++AAKK GV+R VL SSI + Y +
Sbjct: 87 DGNINLIDAAKKAGVKRFVLVSSIGA------------------DKPSHPLEALGPYLDA 128
Query: 88 KTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147
K AE ++ +G D + P G + D G
Sbjct: 129 KRKAE----DYLRASGLDYTIVRP----GGL------TDDPAGTGRVVLGGDG--TRLDG 172
Query: 148 AVHVKDVAKAQVLLFETSAASGR 170
+ DVA+ +T AA G+
Sbjct: 173 PISRADVAEVLAEALDTPAAIGK 195
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 2e-04
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 22/114 (19%)
Query: 3 VFHLAS-PNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPN-PNW 60
+ H A+ P+ P + A+ GTLNVLEAA++ + +S + + + PN+
Sbjct: 77 IIHTAAQPSVTTSASSPRLDFETNAL-GTLNVLEAARQHAPNAPFIFTSTNKVYGDLPNY 135
Query: 61 PQGKVIDETSWT---------------DLDFCKSHKIWYSMSKTLAEKAAWEFA 99
ET + LDF S Y SK A++ E+
Sbjct: 136 -LPLEELETRYELAPEGWSPAGISESFPLDFSHS---LYGASKGAADQYVQEYG 185
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 3e-04
Identities = 27/133 (20%), Positives = 42/133 (31%), Gaps = 29/133 (21%)
Query: 25 PAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWY 84
G ++L+AA + GVRR+V+ S+ DE LD +
Sbjct: 72 DDSDGVKHLLDAAARAGVRRIVVVSAAGLYR-----------DEPGTFRLDDAPLFPPYA 120
Query: 85 SMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHY 144
A+ AA E +G D + P + Y + D
Sbjct: 121 R-----AKAAAEELLRASGLDWTIVRPGALFDEEGETY----------EIGTEGDPAGE- 164
Query: 145 WLGAVHVKDVAKA 157
++ DVA A
Sbjct: 165 --SSISRADVAAA 175
|
Length = 182 |
| >gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 7e-04
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 20/111 (18%)
Query: 3 VFHLASPNTLDD-PKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPN-W 60
++HLA P + +P K L V GTLN+L AK+ G R VL +S S + +P
Sbjct: 68 IYHLACPASPVHYQYNPIKTLK-TNVLGTLNMLGLAKRVGAR--VLLASTSEVYGDPEVH 124
Query: 61 PQGKVIDETSW-----TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDV 106
PQ E+ W C Y K +AE + ++G DV
Sbjct: 125 PQ----PESYWGNVNPIGPRSC------YDEGKRVAETLCMAYHRQHGVDV 165
|
UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.001
Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 12/112 (10%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWP 61
VFHLA+ + D + + V GT N+LEA +K G R V TSS++ P
Sbjct: 70 VFHLAAIVSGGAEADFDLGYRV-NVDGTRNLLEALRKNGPKPRFVFTSSLAVYGLPLPNP 128
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPAT 113
V D T+ S Y K + E +++ + D + T
Sbjct: 129 ---VTDHTALDPA----SS---YGAQKAMCELLLNDYSRRGFVDGRTLRLPT 170
|
Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein | Back alignment and domain information |
|---|
Score = 37.8 bits (89), Expect = 0.003
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 27 VQGTLNVLEAAKKFGVRRVVLTSS 50
V GT NV EAA + GV + VL S+
Sbjct: 101 VLGTENVAEAAIENGVEKFVLIST 124
|
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280 |
| >gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.003
Identities = 41/197 (20%), Positives = 60/197 (30%), Gaps = 34/197 (17%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
V HLA + D E+ A++ L K ++ TS I + P
Sbjct: 67 AVIHLAFTHDFD-NFAQACEVDRRAIEALGEALRGTGK----PLIYTSGIWLLGP----- 116
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
+E D ++S E AA E AE+ V P G
Sbjct: 117 -TGGQEEDEEAPDD--PPTPAARAVS----EAAALELAERGVRASVVRLPPVVHGR---- 165
Query: 122 YVNASGAVLQRLLQGSKD-------TQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCT 174
G V + + ++ W AVH D A+ L E A Y
Sbjct: 166 --GDHGFVPMLIAIAREKGVSAYVGDGKNRW-PAVHRDDAARLYRLALEKGKAGSVYHAV 222
Query: 175 --NGIYQFAEFAEKVSK 189
GI + AE + +
Sbjct: 223 AEEGI-PVKDIAEAIGR 238
|
This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291 |
| >gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases | Back alignment and domain information |
|---|
Score = 37.1 bits (87), Expect = 0.003
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 8/63 (12%)
Query: 2 GVFHLASPNTLDD----PKDPE--KELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIV 55
GV H A LDD PE +L P G N+ E + VL SSI+ ++
Sbjct: 84 GVIHAAG--VLDDGVLASLTPERFAAVLAPKAAGAWNLHELTADLPLDFFVLFSSIAGVL 141
Query: 56 PNP 58
+P
Sbjct: 142 GSP 144
|
It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 37.5 bits (87), Expect = 0.003
Identities = 31/149 (20%), Positives = 46/149 (30%), Gaps = 35/149 (23%)
Query: 35 EAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSK----TL 90
A +R+V SS++ + P Y+ SK L
Sbjct: 128 AALPLMKKQRIVNISSVAGLGGPPGQA---------------------AYAASKAALIGL 166
Query: 91 AEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150
+ A E A + V A+ P P +A L+RL
Sbjct: 167 TKALALELAPRGIR-VNAVAPGYIDTPMTAALESAELEALKRLAAR------IPLGRLGT 219
Query: 151 VKDVAKAQVLLFETSAAS---GRYLCTNG 176
++VA A L AAS G+ L +G
Sbjct: 220 PEEVAAAVAFLASDEAASYITGQTLPVDG 248
|
Length = 251 |
| >gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 37.5 bits (87), Expect = 0.003
Identities = 49/182 (26%), Positives = 74/182 (40%), Gaps = 33/182 (18%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVV-LTSSISSIVPNPNWP 61
V H A+ DP D ++ L V G NV++AAKK GV+R++ +++ + P
Sbjct: 72 VVHTAA--AYKDPDDWYEDTLT-NVVGGANVVQAAKKAGVKRLIYFQTALCYGLK----P 124
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
+ I Y++SKT E + E +G D V A GP
Sbjct: 125 MQQPIRLDHPRAPPGSS-----YAISKTAGE----YYLELSGVDFVTFRLANVTGP---- 171
Query: 122 YVNASGAV---LQRLLQGSK----DTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCT 174
N G + QRL G K DT+ + V VKD+A+ + G Y +
Sbjct: 172 -RNVIGPLPTFYQRLKAGKKCFVTDTRRDF----VFVKDLARVVDKALDGIRGHGAYHFS 226
Query: 175 NG 176
+G
Sbjct: 227 SG 228
|
Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307 |
| >gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 37.5 bits (87), Expect = 0.004
Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 29/239 (12%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQ 62
VFH+AS + + + V+GT N+++ + V R++ TS+ + I
Sbjct: 65 VFHIASYGMSGREQLNRELIEEINVRGTENIIQVCVRRRVPRLIYTSTFNVIFGGQPIRN 124
Query: 63 GKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWE---FAEKNGTDVV---AIHPATSLG 116
G + + LD H YS +K++AE+ + N V+ A+ PA G
Sbjct: 125 GD--ESLPYLPLDLHVDH---YSRTKSIAEQLVLKANNMPLPNNGGVLRTCALRPAGIYG 179
Query: 117 PFPQPYV-NASGAVLQRLLQ---GSKDTQEHYWLGAVHVKDVAKAQVLLFE--TSA---- 166
P Q ++ + + L G + + VHV ++ +A +L E T+A
Sbjct: 180 PGEQRHLPRIVSYIEKGLFMFVYGDPKSLVEF----VHVDNLVQAHILAAEALTTAKGYI 235
Query: 167 ASGR-YLCTNG--IYQFAEFAEKVSKLFPEYPIHRFVCVCLGYLYFVNTWIFNFFWQRI 222
ASG+ Y ++G + F F V L +P R + + F+ + +F I
Sbjct: 236 ASGQAYFISDGRPVNNFEFFRPLVEGLGYSFPSLRLPLSLVYFFAFLTEMV-HFALGPI 293
|
An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339 |
| >gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.004
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 27 VQGTLNVLEAAKKFGVRRVVLTSSISSIVP 56
V GT NV EAA K GV++ VL S+ ++ P
Sbjct: 353 VLGTENVAEAAIKNGVKKFVLISTDKAVNP 382
|
Length = 588 |
| >gnl|CDD|219957 pfam08659, KR, KR domain | Back alignment and domain information |
|---|
Score = 36.3 bits (85), Expect = 0.004
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 2 GVFHLA---SPNTLDDPKDPE--KELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVP 56
GV H A L + E +L P V G N+ EA + + VL SSI+ ++
Sbjct: 84 GVIHAAGVLRDALLAN-MTAEDFARVLAPKVTGAWNLHEATRDRPLDFFVLFSSIAGVLG 142
Query: 57 NP 58
+P
Sbjct: 143 SP 144
|
This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 232 | |||
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.97 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.97 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.97 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.96 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.95 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.95 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.95 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.95 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.94 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.94 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.94 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.94 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.94 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.94 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.94 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.94 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.94 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.94 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.93 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.93 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.93 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.93 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.93 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.93 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.93 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.93 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.92 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.92 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.92 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.92 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.92 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.92 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.91 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.91 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.91 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.91 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.91 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.9 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.9 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.9 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.88 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.87 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.86 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.86 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.86 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.85 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.84 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.84 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.84 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.84 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.84 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.81 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.79 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.78 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.78 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.75 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.73 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.71 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.7 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.7 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.65 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.6 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.57 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.52 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.52 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.5 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.44 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.43 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.4 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.37 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.33 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.31 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.31 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.26 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.26 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.24 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.23 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.22 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.18 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.17 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.16 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.15 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.14 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.13 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.09 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.08 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.08 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.08 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.07 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.07 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.06 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.03 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.02 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.01 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.01 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.0 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.0 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.99 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 98.99 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 98.97 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 98.94 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.92 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 98.92 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 98.92 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 98.91 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 98.89 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 98.89 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 98.89 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.88 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 98.88 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 98.87 | |
| PRK05717 | 255 | oxidoreductase; Validated | 98.86 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.86 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.86 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.86 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 98.85 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 98.85 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 98.82 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.82 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 98.82 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 98.81 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 98.81 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 98.81 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.81 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.81 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 98.81 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 98.8 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 98.79 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.79 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 98.79 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 98.78 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.78 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 98.76 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 98.76 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.76 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 98.74 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 98.74 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 98.73 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 98.72 | |
| PRK08643 | 256 | acetoin reductase; Validated | 98.72 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 98.72 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 98.71 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 98.7 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 98.7 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.7 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 98.69 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 98.69 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 98.68 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.67 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.66 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 98.66 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 98.66 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 98.66 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.65 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 98.65 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.65 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 98.65 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 98.64 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.64 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 98.63 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 98.62 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 98.62 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.62 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.62 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 98.62 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.62 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 98.61 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.57 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 98.57 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.56 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 98.56 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 98.56 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 98.55 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 98.55 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 98.55 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 98.54 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 98.53 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 98.53 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 98.53 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 98.52 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 98.52 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 98.51 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.49 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.49 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 98.49 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 98.47 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.47 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.46 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 98.46 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 98.45 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 98.44 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.43 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.43 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.43 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 98.42 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.41 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 98.36 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.35 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.33 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 98.33 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 98.3 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.28 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 98.28 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.27 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 98.27 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.27 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.23 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.22 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.21 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.21 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 98.2 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.2 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.19 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.19 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.19 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.18 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.18 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.16 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.16 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.12 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 98.12 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.09 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 98.07 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.06 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.05 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.04 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.04 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 98.03 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 98.02 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.01 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.0 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 97.96 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.93 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 97.93 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 97.93 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 97.93 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 97.92 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.91 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 97.88 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 97.87 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 97.87 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 97.85 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 97.71 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.69 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 97.67 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 97.63 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 97.62 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 97.6 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 97.59 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.58 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 97.44 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 97.37 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 97.29 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 97.27 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 97.26 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 97.26 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 97.14 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 97.09 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 97.05 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 97.02 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 96.89 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 96.66 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 96.41 | |
| PLN00106 | 323 | malate dehydrogenase | 96.1 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 95.97 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 95.66 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 94.26 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 93.97 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 90.15 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 89.26 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 85.59 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 84.49 | |
| cd02905 | 140 | Macro_GDAP2_like Macro domain, GDAP2_like family. | 80.73 |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=208.65 Aligned_cols=190 Identities=23% Similarity=0.231 Sum_probs=155.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||......+.+.|..+++.|+.||.+|+++|++.|+++|||.||+ ++||.+. ..|++|+.+..|.
T Consensus 69 daViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStA-avYG~p~---~~PI~E~~~~~p~----- 139 (329)
T COG1087 69 DAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTA-AVYGEPT---TSPISETSPLAPI----- 139 (329)
T ss_pred CEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecch-hhcCCCC---CcccCCCCCCCCC-----
Confidence 789999999998777778999999999999999999999999999998876 8999887 5679999999987
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC-------CChhHHHHHHHHhCCCCc---cCC-------
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY-------VNASGAVLQRLLQGSKDT---QEH------- 143 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~------- 143 (232)
|+|++||++.|+++..+.+..++++++||.+++.|....+. .+.+...+.+...|+-.. ||+
T Consensus 140 -NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DG 218 (329)
T COG1087 140 -NPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDG 218 (329)
T ss_pred -CcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCC
Confidence 79999999999999999999999999999999988554321 122233333333333331 554
Q ss_pred -cccCceeHHhHHHHHHHhhcCCCCCc---eEEEe-cCcccHHHHHHHHHhhCCCCCCcccee
Q 026820 144 -YWLGAVHVKDVAKAQVLLFETSAASG---RYLCT-NGIYQFAEFAEKVSKLFPEYPIHRFVC 201 (232)
Q Consensus 144 -~~~~~i~v~D~a~~~~~~~~~~~~~~---~~~~~-~~~~s~~el~~~i~~~~p~~~~~~~~~ 201 (232)
..||||||.|+|++.+.+++.-..+| .||++ |..+|..|+++.+++.. +.++|..+.
T Consensus 219 T~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vt-g~~ip~~~~ 280 (329)
T COG1087 219 TCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVT-GRDIPVEIA 280 (329)
T ss_pred CeeeeeeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHh-CCcCceeeC
Confidence 67999999999999999987644333 57765 78899999999999998 677776554
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=201.27 Aligned_cols=200 Identities=51% Similarity=0.841 Sum_probs=176.8
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CCEEEEecccceeccC-CCCCCCCccCCCCCCCccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPN-PNWPQGKVIDETSWTDLDFCK 78 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~-~~~~~~~~~~E~~~~~~~~~~ 78 (232)
|+|||+|.+.++.... ++.+..+.+++||.|++++|++.. |||+|++||++++..+ ....++..++|+.|..+....
T Consensus 80 dgVfH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~ 158 (327)
T KOG1502|consen 80 DGVFHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCR 158 (327)
T ss_pred CEEEEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHH
Confidence 7899999998873333 455899999999999999999995 9999999999988776 556667889999999888766
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHH
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQ 158 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 158 (232)
....+|..+|..+|+..++++++.+++.+++-|+.|+||...+..+.....+.++++|....+.+....|+||+|+|+++
T Consensus 159 ~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AH 238 (327)
T KOG1502|consen 159 CKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAH 238 (327)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHH
Confidence 66689999999999999999999999999999999999998887777788899999997766777777799999999999
Q ss_pred HHhhcCCCCCceEEEecCcccHHHHHHHHHhhCCCCCCcccee
Q 026820 159 VLLFETSAASGRYLCTNGIYQFAEFAEKVSKLFPEYPIHRFVC 201 (232)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~p~~~~~~~~~ 201 (232)
+.+++++...|+|++.++...+.|+++.+.+.+|.+.+|..-.
T Consensus 239 v~a~E~~~a~GRyic~~~~~~~~ei~~~l~~~~P~~~ip~~~~ 281 (327)
T KOG1502|consen 239 VLALEKPSAKGRYICVGEVVSIKEIADILRELFPDYPIPKKNA 281 (327)
T ss_pred HHHHcCcccCceEEEecCcccHHHHHHHHHHhCCCCCCCCCCC
Confidence 9999999999999999999889999999999999888775443
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=206.39 Aligned_cols=194 Identities=45% Similarity=0.703 Sum_probs=151.7
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+... ..+...++.|+.++.+++++|.+.+++++|++||.+++|+.....+..+++|+++.....+..+
T Consensus 83 d~Vih~A~~~~-----~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p 157 (342)
T PLN02214 83 DGVFHTASPVT-----DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNT 157 (342)
T ss_pred CEEEEecCCCC-----CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhcccc
Confidence 78999999753 3578889999999999999999999999999999767887543222345788875433222334
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVL 160 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 160 (232)
.++|+.+|..+|++++.+.++.+++++++||+++|||............+..++.+....++++.++|+|++|+|++++.
T Consensus 158 ~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~ 237 (342)
T PLN02214 158 KNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVL 237 (342)
T ss_pred ccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHH
Confidence 47899999999999999988889999999999999998654322222233345566655567778899999999999999
Q ss_pred hhcCCCCCceEEEecCcccHHHHHHHHHhhCCCCCCccc
Q 026820 161 LFETSAASGRYLCTNGIYQFAEFAEKVSKLFPEYPIHRF 199 (232)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~p~~~~~~~ 199 (232)
+++++...++||+++...++.|+++.+++.+|..++|.+
T Consensus 238 al~~~~~~g~yn~~~~~~~~~el~~~i~~~~~~~~~~~~ 276 (342)
T PLN02214 238 VYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPTK 276 (342)
T ss_pred HHhCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCCC
Confidence 998876667887777789999999999999976555543
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-30 Score=193.48 Aligned_cols=182 Identities=19% Similarity=0.184 Sum_probs=164.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCC-CEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGV-RRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|+|+|+..+..++...|..+.+.|+.||.+|++++++... -||+++||. .|||.-... +..++|+++..|+
T Consensus 76 D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTD-EVYG~l~~~-~~~FtE~tp~~Ps---- 149 (340)
T COG1088 76 DAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTD-EVYGDLGLD-DDAFTETTPYNPS---- 149 (340)
T ss_pred CeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccc-cccccccCC-CCCcccCCCCCCC----
Confidence 799999999999888999999999999999999999999864 389999997 999986543 3368999999998
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCC--cccCceeHHhHHH
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEH--YWLGAVHVKDVAK 156 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~ 156 (232)
|||+.||+.+..+++++.+-+|++++|.|+++-|||.+.+. .+++.++.+.+.|++++ +|+ +.|||+||+|-|+
T Consensus 150 --SPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE-KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ 226 (340)
T COG1088 150 --SPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE-KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCR 226 (340)
T ss_pred --CCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch-hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHH
Confidence 69999999999999999999999999999999999998886 68999999999999998 777 7899999999999
Q ss_pred HHHHhhcCCCCCceEEEec-CcccHHHHHHHHHhhC
Q 026820 157 AQVLLFETSAASGRYLCTN-GIYQFAEFAEKVSKLF 191 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~-~~~s~~el~~~i~~~~ 191 (232)
++..++.+...+..||+++ ...+-.|+++.|.+.+
T Consensus 227 ai~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l 262 (340)
T COG1088 227 AIDLVLTKGKIGETYNIGGGNERTNLEVVKTICELL 262 (340)
T ss_pred HHHHHHhcCcCCceEEeCCCccchHHHHHHHHHHHh
Confidence 9999999998866898875 4588899999988877
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=200.88 Aligned_cols=182 Identities=16% Similarity=0.064 Sum_probs=146.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+..+......++..+.++|+.||.+|+++|++.++++|||+||+ .+||... +.+..|+++..|.
T Consensus 92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~-~vyg~~~---~~~~~e~~~~~p~----- 162 (348)
T PRK15181 92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASS-STYGDHP---DLPKIEERIGRPL----- 162 (348)
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeech-HhhCCCC---CCCCCCCCCCCCC-----
Confidence 799999998665334456778899999999999999999999999999997 7788643 3346677666555
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC---ChhHHHHHHHHhCCCCc-cCC--cccCceeHHhH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV---NASGAVLQRLLQGSKDT-QEH--YWLGAVHVKDV 154 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~ 154 (232)
++|+.+|..+|+++..+.++.+++++++||+++|||+..+.. ..+..++.++..++++. +++ +.++|+|++|+
T Consensus 163 -~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~ 241 (348)
T PRK15181 163 -SPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV 241 (348)
T ss_pred -ChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHH
Confidence 589999999999999988888999999999999999865431 24567777778787766 554 67899999999
Q ss_pred HHHHHHhhcCCC---CCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 155 AKAQVLLFETSA---ASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 155 a~~~~~~~~~~~---~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
|++++.++..+. ..+.||++ ++.+|++|+++.+.+.++
T Consensus 242 a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~ 283 (348)
T PRK15181 242 IQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLN 283 (348)
T ss_pred HHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhC
Confidence 999998775432 23478775 678999999999998774
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-28 Score=195.49 Aligned_cols=196 Identities=39% Similarity=0.651 Sum_probs=151.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc-CCCEEEEeccccee-ccCCCCCCCCccCCCCCCCccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSI-VPNPNWPQGKVIDETSWTDLDFCK 78 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~~-~~~~~~~~~~~~~E~~~~~~~~~~ 78 (232)
|+|||+|+.... ....+....++.|+.++.+++++|++. +++++|++||.+++ |+.....++.+++|+++..|..+.
T Consensus 79 d~vih~A~~~~~-~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~ 157 (322)
T PLN02986 79 DAVFHTASPVFF-TVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCR 157 (322)
T ss_pred CEEEEeCCCcCC-CCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhh
Confidence 799999998543 112223457899999999999999986 78999999998553 443322224467888776553222
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHH
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQ 158 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 158 (232)
.+.++|+.+|..+|++++.+.++++++++++||+.+|||...+..+....++..++.+.+. ++++.++|+|++|+|+++
T Consensus 158 ~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~v~v~Dva~a~ 236 (322)
T PLN02986 158 ETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL-FNNRFYRFVDVRDVALAH 236 (322)
T ss_pred ccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC-CCCcCcceeEHHHHHHHH
Confidence 3346899999999999999988889999999999999998654333344566666666653 456678999999999999
Q ss_pred HHhhcCCCCCceEEEecCcccHHHHHHHHHhhCCCCCCcc
Q 026820 159 VLLFETSAASGRYLCTNGIYQFAEFAEKVSKLFPEYPIHR 198 (232)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~p~~~~~~ 198 (232)
+.++.++...++|+++++.+++.|+++.+++.+|...++.
T Consensus 237 ~~al~~~~~~~~yni~~~~~s~~e~~~~i~~~~~~~~~~~ 276 (322)
T PLN02986 237 IKALETPSANGRYIIDGPIMSVNDIIDILRELFPDLCIAD 276 (322)
T ss_pred HHHhcCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCCC
Confidence 9999887666689888888999999999999998665543
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-28 Score=194.08 Aligned_cols=196 Identities=40% Similarity=0.651 Sum_probs=149.8
Q ss_pred CeEEEeecCCCCCCCCCch-hhhHHHHHHHHHHHHHHHHHc-CCCEEEEecccce-eccCCCCCCCCccCCCCCCCcccc
Q 026820 1 MGVFHLASPNTLDDPKDPE-KELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISS-IVPNPNWPQGKVIDETSWTDLDFC 77 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~-~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~-~~~~~~~~~~~~~~E~~~~~~~~~ 77 (232)
|+|||+|+.... ....+ ..+++.|+.++.+++++|.+. +++++|++||.++ +|+.....+..+++|+.+..|..+
T Consensus 78 d~Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~ 155 (322)
T PLN02662 78 EGVFHTASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFC 155 (322)
T ss_pred CEEEEeCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHh
Confidence 789999997643 12233 378899999999999999987 8999999999754 465432222345788876655422
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHH
Q 026820 78 KSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKA 157 (232)
Q Consensus 78 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~ 157 (232)
....++|+.+|..+|++++.+.++.+++++++||+.+|||............+.+++.+.+ ..+++.++|+|++|+|++
T Consensus 156 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~a 234 (322)
T PLN02662 156 EESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TFPNASYRWVDVRDVANA 234 (322)
T ss_pred hcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cCCCCCcCeEEHHHHHHH
Confidence 2233589999999999999998888999999999999999865433344455666666543 356678999999999999
Q ss_pred HHHhhcCCCCCceEEEecCcccHHHHHHHHHhhCCCCCCccc
Q 026820 158 QVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLFPEYPIHRF 199 (232)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~p~~~~~~~ 199 (232)
++.++..+...+.|++++..++++|+++.+.+.+|...+|.+
T Consensus 235 ~~~~~~~~~~~~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~ 276 (322)
T PLN02662 235 HIQAFEIPSASGRYCLVERVVHYSEVVKILHELYPTLQLPEK 276 (322)
T ss_pred HHHHhcCcCcCCcEEEeCCCCCHHHHHHHHHHHCCCCCCCCC
Confidence 999998776566787778889999999999998866555543
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-27 Score=189.75 Aligned_cols=194 Identities=38% Similarity=0.615 Sum_probs=149.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc-CCCEEEEecccceeccCCCC-CCCCccCCCCCCCccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNW-PQGKVIDETSWTDLDFCK 78 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~~~~~~~~-~~~~~~~E~~~~~~~~~~ 78 (232)
|+|||+||..........+.+.++.|+.++.+++++|.+. +++++|++||.+++++.... .+..+++|+.+..|....
T Consensus 79 d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~ 158 (325)
T PLN02989 79 ETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAE 158 (325)
T ss_pred CEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhc
Confidence 7899999976542233445788899999999999999885 57899999998554443211 123467898877664322
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHH
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQ 158 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 158 (232)
...++|+.+|..+|+++..+.++.+++++++||+.+|||...+..+....++.+++.++.+ ++...++|+|++|+|+++
T Consensus 159 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-~~~~~r~~i~v~Dva~a~ 237 (325)
T PLN02989 159 ERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-FNTTHHRFVDVRDVALAH 237 (325)
T ss_pred ccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC-CCCcCcCeeEHHHHHHHH
Confidence 3346899999999999999988889999999999999998765433445566677666544 334567999999999999
Q ss_pred HHhhcCCCCCceEEEecCcccHHHHHHHHHhhCCCCC
Q 026820 159 VLLFETSAASGRYLCTNGIYQFAEFAEKVSKLFPEYP 195 (232)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~p~~~ 195 (232)
+.+++++...+.||++++.+|++|+++.+++.+|...
T Consensus 238 ~~~l~~~~~~~~~ni~~~~~s~~ei~~~i~~~~~~~~ 274 (325)
T PLN02989 238 VKALETPSANGRYIIDGPVVTIKDIENVLREFFPDLC 274 (325)
T ss_pred HHHhcCcccCceEEEecCCCCHHHHHHHHHHHCCCCC
Confidence 9999876655688888788999999999999997543
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.1e-27 Score=183.95 Aligned_cols=189 Identities=33% Similarity=0.308 Sum_probs=136.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+..+... ..+.+.++++|+.||+||+++|++.++++|||+||.+++..+....+-...+|+.+... ..
T Consensus 68 d~V~H~Aa~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~----~~ 142 (280)
T PF01073_consen 68 DVVFHTAAPVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS----SP 142 (280)
T ss_pred ceEEEeCccccccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccc----cc
Confidence 78999999977522 34578899999999999999999999999999999966544222211122356654332 24
Q ss_pred chhHHHHHHHHHHHHHHHHH---H--cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cC--CcccCceeHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAE---K--NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QE--HYWLGAVHVK 152 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~---~--~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~ 152 (232)
.+.|+.||.++|++++++.. + ..+..++|||+.||||++..... .+......+.... .+ +...+++||+
T Consensus 143 ~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~---~~~~~~~~g~~~~~~g~~~~~~~~vyV~ 219 (280)
T PF01073_consen 143 LDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVP---RLVKMVRSGLFLFQIGDGNNLFDFVYVE 219 (280)
T ss_pred cCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccc---hhhHHHHhcccceeecCCCceECcEeHH
Confidence 46899999999999998754 1 25899999999999998654322 2333333442222 33 3578999999
Q ss_pred hHHHHHHHhhcC-------CCCCc-eEEEe-cCccc-HHHHHHHHHhhCCCCCCcc
Q 026820 153 DVAKAQVLLFET-------SAASG-RYLCT-NGIYQ-FAEFAEKVSKLFPEYPIHR 198 (232)
Q Consensus 153 D~a~~~~~~~~~-------~~~~~-~~~~~-~~~~s-~~el~~~i~~~~p~~~~~~ 198 (232)
|+|.+++++.+. ....| .|+++ ++++. ++||...+.+.+ +.+.|.
T Consensus 220 NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~-G~~~~~ 274 (280)
T PF01073_consen 220 NVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEAL-GYPPPK 274 (280)
T ss_pred HHHHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHC-CCCCCc
Confidence 999999987643 22345 57665 67787 999999999999 666664
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.4e-28 Score=181.01 Aligned_cols=181 Identities=21% Similarity=0.237 Sum_probs=153.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc-CCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|.|+|+|+..+...+-.++.+....|+.++..|+++++.. ++++|||+||. .|||+... +....|.+.+.|.
T Consensus 82 d~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTd-eVYGds~~--~~~~~E~s~~nPt---- 154 (331)
T KOG0747|consen 82 DTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTD-EVYGDSDE--DAVVGEASLLNPT---- 154 (331)
T ss_pred hhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEeccc-ceecCccc--cccccccccCCCC----
Confidence 6799999999886666778899999999999999999998 79999999997 89998774 2233488887777
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCC--cccCceeHHhHHH
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEH--YWLGAVHVKDVAK 156 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~ 156 (232)
++|+.+|+++|+.+++|..+++++++++|.++||||++.+. ..+..++.....+++.. .|+ +.++|+|++|+++
T Consensus 155 --npyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~e 231 (331)
T KOG0747|consen 155 --NPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSE 231 (331)
T ss_pred --CchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChH-HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHH
Confidence 69999999999999999999999999999999999998874 57777777666777766 666 6789999999999
Q ss_pred HHHHhhcCCCCCceEEE-ecCcccHHHHHHHHHhhC
Q 026820 157 AQVLLFETSAASGRYLC-TNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~ 191 (232)
++..++++...+.+||+ ++.+.+..|+++.+.+.+
T Consensus 232 a~~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli 267 (331)
T KOG0747|consen 232 AFKAVLEKGELGEIYNIGTDDEMRVIDLAKDICELF 267 (331)
T ss_pred HHHHHHhcCCccceeeccCcchhhHHHHHHHHHHHH
Confidence 99999999655568866 567788888888777553
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-26 Score=191.55 Aligned_cols=185 Identities=23% Similarity=0.273 Sum_probs=145.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||||+.........++.+.++.|+.++.+|+++|++.++ +||++||. .+||... ..+.+|+.+.... +..+
T Consensus 186 D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~-~VYg~~~---~~p~~E~~~~~~~-p~~p 259 (436)
T PLN02166 186 DQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTS-EVYGDPL---EHPQKETYWGNVN-PIGE 259 (436)
T ss_pred CEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcH-HHhCCCC---CCCCCccccccCC-CCCC
Confidence 799999998665334456788999999999999999999885 89999997 7788654 3346776432111 1122
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC-CChhHHHHHHHHhCCCCc-cCC--cccCceeHHhHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY-VNASGAVLQRLLQGSKDT-QEH--YWLGAVHVKDVAK 156 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~ 156 (232)
.+.|+.+|..+|+++..+.+..+++++++|++++||++.... ...+..++.++..++++. +++ +.++|+|++|+++
T Consensus 260 ~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ 339 (436)
T PLN02166 260 RSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVD 339 (436)
T ss_pred CCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHH
Confidence 368999999999999999888899999999999999986432 235667788888888766 555 5789999999999
Q ss_pred HHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 157 AQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
++..+++.. ..+.||++ ++.+|++|+++.+++.++
T Consensus 340 ai~~~~~~~-~~giyNIgs~~~~Si~ela~~I~~~~g 375 (436)
T PLN02166 340 GLVALMEGE-HVGPFNLGNPGEFTMLELAEVVKETID 375 (436)
T ss_pred HHHHHHhcC-CCceEEeCCCCcEeHHHHHHHHHHHhC
Confidence 999998754 34678765 677999999999999873
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-26 Score=186.82 Aligned_cols=182 Identities=19% Similarity=0.179 Sum_probs=145.8
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHH---------cCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKK---------FGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~---------~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||..........+.++++.|+.++.+++++|.+ .+++++|++||. .+|+..... +.+++|+.+
T Consensus 76 D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~-~vyg~~~~~-~~~~~E~~~ 153 (355)
T PRK10217 76 DCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTD-EVYGDLHST-DDFFTETTP 153 (355)
T ss_pred CEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecch-hhcCCCCCC-CCCcCCCCC
Confidence 799999998764223345688999999999999999986 256799999997 678754321 345788877
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cC--CcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QE--HYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~ 148 (232)
..|. +.|+.||..+|.++..++++.+++++++||+.+|||+..+. ..+..++.+...++++. ++ ++.++|
T Consensus 154 ~~p~------s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~g~g~~~~~~ 226 (355)
T PRK10217 154 YAPS------SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE-KLIPLMILNALAGKPLPVYGNGQQIRDW 226 (355)
T ss_pred CCCC------ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc-cHHHHHHHHHhcCCCceEeCCCCeeeCc
Confidence 6665 58999999999999999888899999999999999987543 35566777777777654 44 468999
Q ss_pred eeHHhHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 149 VHVKDVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+|++|+++++..++......+.||++ ++.+|++|+++.+.+.+
T Consensus 227 i~v~D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~ 270 (355)
T PRK10217 227 LYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELL 270 (355)
T ss_pred CcHHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHh
Confidence 99999999999999876544578775 67799999999999876
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-25 Score=180.64 Aligned_cols=195 Identities=37% Similarity=0.578 Sum_probs=139.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc-CCCEEEEecccceeccCCC-CCCCCccCCCCCCCcc---
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPN-WPQGKVIDETSWTDLD--- 75 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~~~~~~~-~~~~~~~~E~~~~~~~--- 75 (232)
|+|||+|+.... ....+...+++.|+.++.+++++|.+. +++++|++||. ++|+... ...+.+++|+.+....
T Consensus 82 d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~-~~~g~~~~~~~~~~~~E~~~~~~~~~~ 159 (338)
T PLN00198 82 DLVFHVATPVNF-ASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSA-AAVSINKLSGTGLVMNEKNWTDVEFLT 159 (338)
T ss_pred CEEEEeCCCCcc-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecc-eeeeccCCCCCCceeccccCCchhhhh
Confidence 789999997543 112222457799999999999999887 68999999997 5565422 1113345665422100
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cC-------CcccC
Q 026820 76 FCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QE-------HYWLG 147 (232)
Q Consensus 76 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~ 147 (232)
.+.++.++|+.||..+|.+++.++++.+++++++||+++|||...........++..+..+.+.. .+ ++.++
T Consensus 160 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 239 (338)
T PLN00198 160 SEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSIS 239 (338)
T ss_pred hcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcc
Confidence 01123468999999999999999888899999999999999986543222222344555555443 33 23479
Q ss_pred ceeHHhHHHHHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhCCCCCCc
Q 026820 148 AVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~p~~~~~ 197 (232)
|+||+|++++++.+++.....+.|++++..+++.|+++.+.+.+|..+++
T Consensus 240 ~i~V~D~a~a~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~~~~ 289 (338)
T PLN00198 240 ITHVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVP 289 (338)
T ss_pred eeEHHHHHHHHHHHhhCcCcCCcEEEecCCCCHHHHHHHHHHHCCCCCCC
Confidence 99999999999999987655567887888899999999999988654443
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.8e-26 Score=184.22 Aligned_cols=186 Identities=16% Similarity=0.186 Sum_probs=143.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccc-cc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC-KS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~-~~ 79 (232)
|+|||+|+.........++...++.|+.++.+++++|++.+ ++|||+||. .+||... +.+++|+.++....+ ..
T Consensus 70 d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~-~vyg~~~---~~~~~ee~~~~~~~~~~~ 144 (347)
T PRK11908 70 DVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTS-EVYGMCP---DEEFDPEASPLVYGPINK 144 (347)
T ss_pred CEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecc-eeeccCC---CcCcCccccccccCcCCC
Confidence 78999999865533345677888999999999999999988 799999997 6787543 234666653221111 12
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCC-------CCChhHHHHHHHHhCCCCc-c--CCcccCce
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP-------YVNASGAVLQRLLQGSKDT-Q--EHYWLGAV 149 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~-------~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i 149 (232)
+.+.|+.+|..+|+.+..++++.+++++++||+++|||+..+ ....+..++.++..++++. . +++.++|+
T Consensus 145 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i 224 (347)
T PRK11908 145 PRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFT 224 (347)
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccc
Confidence 346899999999999999988889999999999999997532 1234567777788887755 3 34788999
Q ss_pred eHHhHHHHHHHhhcCCC--C-CceEEEec--CcccHHHHHHHHHhhC
Q 026820 150 HVKDVAKAQVLLFETSA--A-SGRYLCTN--GIYQFAEFAEKVSKLF 191 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~-~~~~~~~~--~~~s~~el~~~i~~~~ 191 (232)
|++|+++++..++.++. . ++.||+++ ..+|++|+++.+.+.+
T Consensus 225 ~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~ 271 (347)
T PRK11908 225 DIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELA 271 (347)
T ss_pred cHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHh
Confidence 99999999999998753 2 33687765 3699999999999876
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=187.35 Aligned_cols=184 Identities=22% Similarity=0.242 Sum_probs=143.8
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+.........++.+.++.|+.++.+|+++|++.++ +||++||. .+|+... ..+.+|+.+.... +...
T Consensus 185 D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~-~VYg~~~---~~p~~E~~~~~~~-P~~~ 258 (442)
T PLN02206 185 DQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS-EVYGDPL---QHPQVETYWGNVN-PIGV 258 (442)
T ss_pred CEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECCh-HHhCCCC---CCCCCccccccCC-CCCc
Confidence 799999998765333446788999999999999999999986 89999997 7787654 3346676432111 1112
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC-CChhHHHHHHHHhCCCCc-cCC--cccCceeHHhHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY-VNASGAVLQRLLQGSKDT-QEH--YWLGAVHVKDVAK 156 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~ 156 (232)
.+.|+.+|..+|+++..+.+..+++++++|++++|||+.... ...+..++.++..++++. +++ +.++|+|++|+++
T Consensus 259 ~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ 338 (442)
T PLN02206 259 RSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVE 338 (442)
T ss_pred cchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHH
Confidence 368999999999999998888899999999999999975421 234566777777777765 554 5789999999999
Q ss_pred HHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 157 AQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
++..+++.. ..+.||++ ++.+++.|+++.+++.+
T Consensus 339 ai~~a~e~~-~~g~yNIgs~~~~sl~Elae~i~~~~ 373 (442)
T PLN02206 339 GLMRLMEGE-HVGPFNLGNPGEFTMLELAKVVQETI 373 (442)
T ss_pred HHHHHHhcC-CCceEEEcCCCceeHHHHHHHHHHHh
Confidence 999998754 34578765 67799999999999987
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-25 Score=187.21 Aligned_cols=186 Identities=18% Similarity=0.132 Sum_probs=136.8
Q ss_pred CeEEEeecCCCCCCCCCc---hhhhHHHHHHHHHHHHHHHHHcCCC-EEEEecccceeccCCCCC-CCCccC------CC
Q 026820 1 MGVFHLASPNTLDDPKDP---EKELLIPAVQGTLNVLEAAKKFGVR-RVVLTSSISSIVPNPNWP-QGKVID------ET 69 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~---~~~~~~~nv~~~~~l~~~~~~~~~~-~~i~~Ss~~~~~~~~~~~-~~~~~~------E~ 69 (232)
|+|||+|+.........+ ....++.|+.|+.+++++|++.+++ +||++||. .+||....+ ....++ |+
T Consensus 138 D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~-~vYG~~~~~~~E~~i~~~~~~~e~ 216 (442)
T PLN02572 138 DAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTM-GEYGTPNIDIEEGYITITHNGRTD 216 (442)
T ss_pred CEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecc-eecCCCCCCCcccccccccccccc
Confidence 799999987543222222 2455789999999999999999885 89999997 788864311 001111 22
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC----------------CChhHHHHHHH
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY----------------VNASGAVLQRL 133 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~----------------~~~~~~~~~~~ 133 (232)
++.. +..+.++|+.+|..+|.++..+++..|++++++||+++|||+.... ...+..++.++
T Consensus 217 ~~~~---~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~ 293 (442)
T PLN02572 217 TLPY---PKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQA 293 (442)
T ss_pred cccC---CCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHH
Confidence 2111 1222368999999999999999988899999999999999986431 12345566777
Q ss_pred HhCCCCc-cC--CcccCceeHHhHHHHHHHhhcCCCCCc---eEEEecCcccHHHHHHHHHhh
Q 026820 134 LQGSKDT-QE--HYWLGAVHVKDVAKAQVLLFETSAASG---RYLCTNGIYQFAEFAEKVSKL 190 (232)
Q Consensus 134 ~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~---~~~~~~~~~s~~el~~~i~~~ 190 (232)
..|+++. +| ++.|+|+||+|++++++.++++....| .||++++.++++|+++.+++.
T Consensus 294 ~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~~si~el~~~i~~~ 356 (442)
T PLN02572 294 AVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQFSVNELAKLVTKA 356 (442)
T ss_pred hcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCceeHHHHHHHHHHH
Confidence 7787765 55 477899999999999999997653333 477777789999999999998
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=197.00 Aligned_cols=184 Identities=20% Similarity=0.187 Sum_probs=147.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CCEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+|+..........+.++.+.|+.++.+|+++|++.+ +++|||+||. .+||.....+....+|+++..|.
T Consensus 82 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~-~vyg~~~~~~~~~~~E~~~~~p~---- 156 (668)
T PLN02260 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTD-EVYGETDEDADVGNHEASQLLPT---- 156 (668)
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcch-HHhCCCccccccCccccCCCCCC----
Confidence 79999999976533334567888999999999999999986 8999999997 77886543211224566665554
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCC--cccCceeHHhHHH
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEH--YWLGAVHVKDVAK 156 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~ 156 (232)
++|+.+|..+|+++..+.++.+++++|+||+++||++.... ..+..++.....+.++. .++ +.++|+|++|+|+
T Consensus 157 --~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~-~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~ 233 (668)
T PLN02260 157 --NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAE 233 (668)
T ss_pred --CCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc-cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHH
Confidence 58999999999999998888899999999999999986543 35566667777777665 444 6789999999999
Q ss_pred HHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 157 AQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
++..+++.....+.||++ ++.+++.|+++.+++.++
T Consensus 234 a~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g 270 (668)
T PLN02260 234 AFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFG 270 (668)
T ss_pred HHHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhC
Confidence 999998776555688775 577999999999999883
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-25 Score=179.20 Aligned_cols=191 Identities=38% Similarity=0.647 Sum_probs=136.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CCEEEEecccceeccCCCCCCCCc-cCCCCCCCcc---
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKV-IDETSWTDLD--- 75 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~-~~E~~~~~~~--- 75 (232)
|+|||+|+..... ...+..+.+++|+.++.+++++|.+.+ +++|||+||.+++++... ..+ ++|+.+....
T Consensus 79 d~ViH~A~~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~---~~~~~~E~~~~~~~~~~ 154 (351)
T PLN02650 79 TGVFHVATPMDFE-SKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEH---QKPVYDEDCWSDLDFCR 154 (351)
T ss_pred CEEEEeCCCCCCC-CCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCC---CCCccCcccCCchhhhh
Confidence 7899999876531 122234788999999999999999876 789999999755443322 122 4666432111
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHH--HHhCCCCccCC-cccCceeHH
Q 026820 76 FCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQR--LLQGSKDTQEH-YWLGAVHVK 152 (232)
Q Consensus 76 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~i~v~ 152 (232)
.+..+.++|+.||..+|.+++.++++++++++++||+++|||....... ..++.. ...+.....+. ..++|+|++
T Consensus 155 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~v~V~ 232 (351)
T PLN02650 155 RKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMP--PSLITALSLITGNEAHYSIIKQGQFVHLD 232 (351)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCC--ccHHHHHHHhcCCccccCcCCCcceeeHH
Confidence 0112235899999999999999988889999999999999998654211 112221 22333222222 457999999
Q ss_pred hHHHHHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhCCCCCCc
Q 026820 153 DVAKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 153 D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~p~~~~~ 197 (232)
|+|++++.+++++...+.|++++..+++.|+++.+++.+|...+|
T Consensus 233 Dva~a~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~~~~~~~ 277 (351)
T PLN02650 233 DLCNAHIFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIP 277 (351)
T ss_pred HHHHHHHHHhcCcCcCceEEecCCCcCHHHHHHHHHHhCcccCCC
Confidence 999999999987655567888888899999999999988654444
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-25 Score=178.04 Aligned_cols=186 Identities=20% Similarity=0.230 Sum_probs=139.1
Q ss_pred CeEEEeecCCCC-CCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTL-DDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||||+..+. ......+.++++.|+.++.+|+++|++.+++++|++||. .+|+... ..+++|+++..... .+
T Consensus 51 d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~-~vyg~~~---~~~~~E~~~~~~~~-~p 125 (306)
T PLN02725 51 TYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSS-CIYPKFA---PQPIPETALLTGPP-EP 125 (306)
T ss_pred CEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCce-eecCCCC---CCCCCHHHhccCCC-CC
Confidence 799999998653 222345678899999999999999999999999999997 6788643 44588877432110 11
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC---CChhHHHHHH----HHhCCCCc--cC--CcccCc
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY---VNASGAVLQR----LLQGSKDT--QE--HYWLGA 148 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~---~~~~~~~~~~----~~~~~~~~--~~--~~~~~~ 148 (232)
....|+.+|..+|++++.+.+..+++++++||+.+||+..... ...+..++.. ...+.++. ++ ++.+++
T Consensus 126 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~ 205 (306)
T PLN02725 126 TNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREF 205 (306)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeecc
Confidence 1135999999999999988888899999999999999975321 1223333333 23454443 33 467899
Q ss_pred eeHHhHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 149 VHVKDVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+|++|++++++.++......+.||++ +..+++.|+++.+++.+
T Consensus 206 i~v~Dv~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 249 (306)
T PLN02725 206 LHVDDLADAVVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVV 249 (306)
T ss_pred ccHHHHHHHHHHHHhccccCcceEeCCCCcccHHHHHHHHHHHh
Confidence 99999999999999775444567665 67799999999999988
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.3e-25 Score=180.02 Aligned_cols=183 Identities=19% Similarity=0.203 Sum_probs=142.8
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc---------CCCEEEEecccceeccCCCCCC------C-C
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF---------GVRRVVLTSSISSIVPNPNWPQ------G-K 64 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~---------~~~~~i~~Ss~~~~~~~~~~~~------~-~ 64 (232)
|+|||+||..........+.++++.|+.++.+++++|.+. ++++||++||. .+|+....+. . .
T Consensus 75 d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~-~vyg~~~~~~~~~~~~~~~ 153 (352)
T PRK10084 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTD-EVYGDLPHPDEVENSEELP 153 (352)
T ss_pred CEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecch-hhcCCCCccccccccccCC
Confidence 7999999986542233456889999999999999999864 46789999997 6677532110 0 1
Q ss_pred ccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-c--
Q 026820 65 VIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-Q-- 141 (232)
Q Consensus 65 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~-- 141 (232)
+++|+.+..|. +.|+.+|..+|+++..+++..+++++++|++.+|||..... ..+..++.++..+.++. +
T Consensus 154 ~~~E~~~~~p~------~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~~~ 226 (352)
T PRK10084 154 LFTETTAYAPS------SPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGK 226 (352)
T ss_pred CccccCCCCCC------ChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc-chHHHHHHHHhcCCCeEEeCC
Confidence 36777766655 58999999999999998888899999999999999986432 35566667777776644 4
Q ss_pred CCcccCceeHHhHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 142 EHYWLGAVHVKDVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 142 ~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+++.++|+|++|+++++..+++.....+.|+++ ++..+++|+++.+++.+
T Consensus 227 g~~~~~~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~ 277 (352)
T PRK10084 227 GDQIRDWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLL 277 (352)
T ss_pred CCeEEeeEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHh
Confidence 447899999999999999998765444578775 56799999999998887
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-25 Score=182.35 Aligned_cols=187 Identities=17% Similarity=0.187 Sum_probs=137.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcc-----
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLD----- 75 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~----- 75 (232)
|+|||+|+..........+.+....|+.++.+++++|++.+ ++|||+||. .+||.... ..++|+.+..+.
T Consensus 88 d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~-~vYg~~~~---~~~~e~~p~~~~~~~~~ 162 (386)
T PLN02427 88 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTC-EVYGKTIG---SFLPKDHPLRQDPAFYV 162 (386)
T ss_pred CEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeee-eeeCCCcC---CCCCccccccccccccc
Confidence 79999999765422233455667789999999999998888 899999997 67886431 123333332110
Q ss_pred -----------cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCC-------C---CChhHHHHHHHH
Q 026820 76 -----------FCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP-------Y---VNASGAVLQRLL 134 (232)
Q Consensus 76 -----------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~-------~---~~~~~~~~~~~~ 134 (232)
....+.+.|+.+|..+|+++..++++.+++++++||+++|||+... . ...+..++..+.
T Consensus 163 ~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~ 242 (386)
T PLN02427 163 LKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLL 242 (386)
T ss_pred ccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHh
Confidence 0012346899999999999999888889999999999999997531 0 113344556677
Q ss_pred hCCCCc-cC--CcccCceeHHhHHHHHHHhhcCCC-CCc-eEEEec--CcccHHHHHHHHHhhCC
Q 026820 135 QGSKDT-QE--HYWLGAVHVKDVAKAQVLLFETSA-ASG-RYLCTN--GIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 135 ~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~~-~~~-~~~~~~--~~~s~~el~~~i~~~~p 192 (232)
.++++. ++ ++.++|+|++|+|++++.+++++. ..+ .||+++ +.+++.|+++.+.+.++
T Consensus 243 ~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g 307 (386)
T PLN02427 243 RREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYA 307 (386)
T ss_pred cCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhc
Confidence 777665 44 367899999999999999998753 334 687764 47999999999999874
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-25 Score=176.46 Aligned_cols=178 Identities=16% Similarity=0.162 Sum_probs=138.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||..+.. ...+...++.|+.++.+|+++|++.++ +||++||. .+|+... ..+.+|+.+..|.
T Consensus 70 d~Vih~A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~-~vyg~~~---~~~~~E~~~~~p~----- 137 (308)
T PRK11150 70 EAIFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSA-ATYGGRT---DDFIEEREYEKPL----- 137 (308)
T ss_pred cEEEECceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcch-HHhCcCC---CCCCccCCCCCCC-----
Confidence 7999999975531 223556889999999999999999987 69999997 6787653 2346777666665
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC--C-hhHHHHHHHHhCCCCc-c-CC--cccCceeHHh
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV--N-ASGAVLQRLLQGSKDT-Q-EH--YWLGAVHVKD 153 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~--~-~~~~~~~~~~~~~~~~-~-~~--~~~~~i~v~D 153 (232)
++|+.+|..+|++++.+..+.+++++++||+++||++..... . ....+..++.++..+. + ++ ..++|+|++|
T Consensus 138 -~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D 216 (308)
T PRK11150 138 -NVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGD 216 (308)
T ss_pred -CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHH
Confidence 589999999999999988778999999999999999864421 1 1223445666776543 3 33 4689999999
Q ss_pred HHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 154 VAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 154 ~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
+|+++..+++.. ..+.||++ ++.+++.|+++.+.+.++
T Consensus 217 ~a~a~~~~~~~~-~~~~yni~~~~~~s~~el~~~i~~~~~ 255 (308)
T PRK11150 217 VAAVNLWFWENG-VSGIFNCGTGRAESFQAVADAVLAYHK 255 (308)
T ss_pred HHHHHHHHHhcC-CCCeEEcCCCCceeHHHHHHHHHHHhC
Confidence 999999988764 34578775 667999999999999874
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=177.57 Aligned_cols=185 Identities=21% Similarity=0.124 Sum_probs=144.8
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CCEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+||.........++...+++|+.++.+++++|.+.+ ++++|++||. .+|+.... ..+++|+.+..|.
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~-~vyg~~~~--~~~~~e~~~~~p~---- 149 (349)
T TIGR02622 77 EIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSD-KCYRNDEW--VWGYRETDPLGGH---- 149 (349)
T ss_pred CEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEech-hhhCCCCC--CCCCccCCCCCCC----
Confidence 78999999755433445677899999999999999998876 7899999997 67876432 2346777766655
Q ss_pred cchhHHHHHHHHHHHHHHHHHHc-------CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCcc--CCcccCcee
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKN-------GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQ--EHYWLGAVH 150 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~ 150 (232)
++|+.+|..+|.++..++++. +++++++||+++|||+.......+..++..+..+.++.. +++.++|+|
T Consensus 150 --~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~ 227 (349)
T TIGR02622 150 --DPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQH 227 (349)
T ss_pred --CcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceee
Confidence 589999999999999887654 899999999999999754333456777888888877664 447899999
Q ss_pred HHhHHHHHHHhhcCC-----CCCceEEEec---CcccHHHHHHHHHhhCCCC
Q 026820 151 VKDVAKAQVLLFETS-----AASGRYLCTN---GIYQFAEFAEKVSKLFPEY 194 (232)
Q Consensus 151 v~D~a~~~~~~~~~~-----~~~~~~~~~~---~~~s~~el~~~i~~~~p~~ 194 (232)
++|+|++++.++++. ...+.||++. ++++..|+++.+.+.+++.
T Consensus 228 v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~ 279 (349)
T TIGR02622 228 VLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGD 279 (349)
T ss_pred HHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCC
Confidence 999999999887642 1234788763 5799999999999876543
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.7e-25 Score=191.15 Aligned_cols=187 Identities=19% Similarity=0.220 Sum_probs=146.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccc-cc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC-KS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~-~~ 79 (232)
|+|||+||..+.......+...++.|+.++.+++++|++.+ ++|||+||. .+||... +.+++|+.+..+..+ ..
T Consensus 384 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~-~vyg~~~---~~~~~E~~~~~~~~p~~~ 458 (660)
T PRK08125 384 DVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTS-EVYGMCT---DKYFDEDTSNLIVGPINK 458 (660)
T ss_pred CEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcch-hhcCCCC---CCCcCccccccccCCCCC
Confidence 79999999876533344567889999999999999999988 799999997 7788643 335788875422111 12
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCC-------CCChhHHHHHHHHhCCCCc-cC--CcccCce
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP-------YVNASGAVLQRLLQGSKDT-QE--HYWLGAV 149 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~-------~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i 149 (232)
+.+.|+.||..+|+++..+.+.++++++++||+++|||+... ....+..++.++..++++. .+ ++.++|+
T Consensus 459 p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i 538 (660)
T PRK08125 459 QRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFT 538 (660)
T ss_pred CccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeecee
Confidence 335899999999999999988889999999999999997532 1234667778887777765 43 4789999
Q ss_pred eHHhHHHHHHHhhcCCC--CCc-eEEEec-C-cccHHHHHHHHHhhCC
Q 026820 150 HVKDVAKAQVLLFETSA--ASG-RYLCTN-G-IYQFAEFAEKVSKLFP 192 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~-~-~~s~~el~~~i~~~~p 192 (232)
|++|+|++++.++++.. ..+ .||+++ + .+|++|+++.+.+.++
T Consensus 539 ~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g 586 (660)
T PRK08125 539 DIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFE 586 (660)
T ss_pred eHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhc
Confidence 99999999999997653 234 687764 4 6999999999999874
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-24 Score=176.09 Aligned_cols=188 Identities=30% Similarity=0.452 Sum_probs=138.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc-CCCEEEEecccc-eeccCCCCC-CCCccCCCCCCCcccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSIS-SIVPNPNWP-QGKVIDETSWTDLDFC 77 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~-~~~~~~~~~-~~~~~~E~~~~~~~~~ 77 (232)
|+|||+|+..+............+.|+.++.+++++|.+. +++++|++||.. .+|+..... ....++|+.+.....+
T Consensus 130 d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~ 209 (367)
T PLN02686 130 AGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFC 209 (367)
T ss_pred cEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhc
Confidence 6899999986541111123466788999999999999987 899999999974 467642111 0134677665443323
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHH
Q 026820 78 KSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKA 157 (232)
Q Consensus 78 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~ 157 (232)
..+.++|+.+|..+|++++.++++.+++++++||+++|||+...... ..+.+++.+....++++.++|+||+|++++
T Consensus 210 ~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~---~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A 286 (367)
T PLN02686 210 RDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNS---TATIAYLKGAQEMLADGLLATADVERLAEA 286 (367)
T ss_pred ccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCC---hhHHHHhcCCCccCCCCCcCeEEHHHHHHH
Confidence 33446899999999999999888889999999999999997543211 112344555433467777789999999999
Q ss_pred HHHhhcCC---CCCceEEEecCcccHHHHHHHHHhhC
Q 026820 158 QVLLFETS---AASGRYLCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 158 ~~~~~~~~---~~~~~~~~~~~~~s~~el~~~i~~~~ 191 (232)
++.+++.. ...++|+++++.+++.|+++.+++.+
T Consensus 287 ~~~al~~~~~~~~~~~yi~~g~~~s~~e~~~~i~~~~ 323 (367)
T PLN02686 287 HVCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQI 323 (367)
T ss_pred HHHHHhccCCCCCCCcEEEeCCCccHHHHHHHHHHHc
Confidence 99999752 23347888888999999999999998
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-24 Score=175.71 Aligned_cols=181 Identities=17% Similarity=0.104 Sum_probs=141.8
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCC---EEEEecccceeccCCCCCCCCccCCCCCCCcccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVR---RVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC 77 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~---~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~ 77 (232)
|+|||+|+..+.......+....+.|+.++.+++++|.+.+++ +|||+||. .+||... ..+++|+.+..|.
T Consensus 80 d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~-~vyg~~~---~~~~~E~~~~~p~-- 153 (343)
T TIGR01472 80 TEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTS-ELYGKVQ---EIPQNETTPFYPR-- 153 (343)
T ss_pred CEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccH-HhhCCCC---CCCCCCCCCCCCC--
Confidence 7999999987653333445677788999999999999988763 89999997 7788654 3357888877665
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC--CChhHHHHHHHHhCCCCc--cC--CcccCceeH
Q 026820 78 KSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY--VNASGAVLQRLLQGSKDT--QE--HYWLGAVHV 151 (232)
Q Consensus 78 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~--~~--~~~~~~i~v 151 (232)
++|+.||..+|.++..++++.++++++.|+.++|||..... ...+...+.++..+.+.. +| ++.++|+||
T Consensus 154 ----~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V 229 (343)
T TIGR01472 154 ----SPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHA 229 (343)
T ss_pred ----ChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeH
Confidence 69999999999999999888899999999999999874322 123345555666665432 34 478999999
Q ss_pred HhHHHHHHHhhcCCCCCceEEE-ecCcccHHHHHHHHHhhCC
Q 026820 152 KDVAKAQVLLFETSAASGRYLC-TNGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~p 192 (232)
+|+|++++.++.++. .+.||+ +++++|++|+++.+++.++
T Consensus 230 ~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g 270 (343)
T TIGR01472 230 KDYVEAMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIG 270 (343)
T ss_pred HHHHHHHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcC
Confidence 999999999987653 356766 4788999999999999883
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-24 Score=164.83 Aligned_cols=173 Identities=20% Similarity=0.192 Sum_probs=148.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+.+....++..++..+.+|..++.|++++|++.|. ++||+||..+ |.+.. +.++.|++++.|.
T Consensus 52 DvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyV-FDG~~---~~~Y~E~D~~~P~----- 121 (281)
T COG1091 52 DVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYV-FDGEK---GGPYKETDTPNPL----- 121 (281)
T ss_pred CEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceE-ecCCC---CCCCCCCCCCCCh-----
Confidence 899999999999888998999999999999999999999997 8999999855 44443 4469999999998
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~ 159 (232)
+.||+||+.+|+.+.++ +-+.+|+|.+++||... .++...+++....++.+. .-|+..+.+++.|+|+++.
T Consensus 122 -nvYG~sKl~GE~~v~~~----~~~~~I~Rtswv~g~~g---~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~ 193 (281)
T COG1091 122 -NVYGRSKLAGEEAVRAA----GPRHLILRTSWVYGEYG---NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAIL 193 (281)
T ss_pred -hhhhHHHHHHHHHHHHh----CCCEEEEEeeeeecCCC---CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHH
Confidence 69999999999998765 57789999999999865 245666666666777776 7778889999999999999
Q ss_pred HhhcCCCCCceEEEecCc-ccHHHHHHHHHhhC
Q 026820 160 LLFETSAASGRYLCTNGI-YQFAEFAEKVSKLF 191 (232)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~-~s~~el~~~i~~~~ 191 (232)
.++......++|++++.. .||.|+++.+.+.+
T Consensus 194 ~ll~~~~~~~~yH~~~~g~~Swydfa~~I~~~~ 226 (281)
T COG1091 194 ELLEKEKEGGVYHLVNSGECSWYEFAKAIFEEA 226 (281)
T ss_pred HHHhccccCcEEEEeCCCcccHHHHHHHHHHHh
Confidence 999888777788776644 79999999999886
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-24 Score=175.78 Aligned_cols=184 Identities=17% Similarity=0.124 Sum_probs=137.8
Q ss_pred CeEEEeecCCCC-CCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCC-CCCccCCCC--CCCccc
Q 026820 1 MGVFHLASPNTL-DDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP-QGKVIDETS--WTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~-~~~~~~E~~--~~~~~~ 76 (232)
|+|||+|+..+. ......+......|+.++.+|+++|++.++++|||+||. .+|+..... ++.+++|+. +..|.
T Consensus 87 D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~-~vYg~~~~~~~~~~~~E~~~~p~~p~- 164 (370)
T PLN02695 87 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSA-CIYPEFKQLETNVSLKESDAWPAEPQ- 164 (370)
T ss_pred CEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCch-hhcCCccccCcCCCcCcccCCCCCCC-
Confidence 799999997643 111233456678899999999999999999999999997 678864321 122356654 33443
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC---ChhHHHHHHHHhC-CCCc-cCC--cccCce
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV---NASGAVLQRLLQG-SKDT-QEH--YWLGAV 149 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~-~~~~-~~~--~~~~~i 149 (232)
+.|+.+|..+|+++..++++.+++++++||+++|||+..... .....++.++..+ .++. +++ +.++|+
T Consensus 165 -----s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i 239 (370)
T PLN02695 165 -----DAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFT 239 (370)
T ss_pred -----CHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEE
Confidence 699999999999999988888999999999999999754211 1234566666553 4443 444 688999
Q ss_pred eHHhHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 150 HVKDVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
|++|++++++.++... ..+.||++ ++.+|++|+++.+.+..+
T Consensus 240 ~v~D~a~ai~~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g 282 (370)
T PLN02695 240 FIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIALSFEN 282 (370)
T ss_pred eHHHHHHHHHHHHhcc-CCCceEecCCCceeHHHHHHHHHHHhC
Confidence 9999999999987664 34567765 677999999999998773
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-24 Score=170.24 Aligned_cols=188 Identities=30% Similarity=0.497 Sum_probs=140.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc-CCCEEEEecccceec-cCCCCCCCCccCCCCCCCccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIV-PNPNWPQGKVIDETSWTDLDFCK 78 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~~~-~~~~~~~~~~~~E~~~~~~~~~~ 78 (232)
|+|+|+++..... .....++++.|+.++.+++++|.+. +++++|++||.++++ +........+++|+.+..+....
T Consensus 80 d~v~~~~~~~~~~--~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~ 157 (297)
T PLN02583 80 SGLFCCFDPPSDY--PSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCR 157 (297)
T ss_pred CEEEEeCccCCcc--cccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHh
Confidence 5788987654321 1235688999999999999999887 689999999986553 31211124467888775544322
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHH
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQ 158 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 158 (232)
....+|+.||..+|+.++.++++.+++++++||+.||||...... ..+.+.....+++.++||||+|+|+++
T Consensus 158 ~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~--------~~~~~~~~~~~~~~~~~v~V~Dva~a~ 229 (297)
T PLN02583 158 KFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN--------PYLKGAAQMYENGVLVTVDVNFLVDAH 229 (297)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch--------hhhcCCcccCcccCcceEEHHHHHHHH
Confidence 333479999999999999988778999999999999999754321 122333223445567899999999999
Q ss_pred HHhhcCCCCCceEEEecCccc-HHHHHHHHHhhCCCCCCcc
Q 026820 159 VLLFETSAASGRYLCTNGIYQ-FAEFAEKVSKLFPEYPIHR 198 (232)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~s-~~el~~~i~~~~p~~~~~~ 198 (232)
+.+++.+...++|++.++..+ +.++.+.+++.+|..++|.
T Consensus 230 ~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 270 (297)
T PLN02583 230 IRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPP 270 (297)
T ss_pred HHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCCCCCCCC
Confidence 999998877779988877655 6789999999999887764
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.5e-24 Score=170.41 Aligned_cols=182 Identities=30% Similarity=0.332 Sum_probs=142.1
Q ss_pred CeEEEeecCCCCCCCCC-chhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCC-CCCCccccc
Q 026820 1 MGVFHLASPNTLDDPKD-PEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDET-SWTDLDFCK 78 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~-~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~-~~~~~~~~~ 78 (232)
|+|||+|+......... .+.+++..|+.++.+++++|++.+++++||.||.+.+++. .. +.+++|+ .+..|.
T Consensus 66 d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~-~~--~~~~~E~~~~~~p~--- 139 (314)
T COG0451 66 DAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGD-PP--PLPIDEDLGPPRPL--- 139 (314)
T ss_pred CEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCC-CC--CCCcccccCCCCCC---
Confidence 78999999987622222 3456999999999999999999999999998876444444 21 3368888 444444
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCC--hhHHHHHHHHhCCC-Cc-cCC--cccCceeHH
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVN--ASGAVLQRLLQGSK-DT-QEH--YWLGAVHVK 152 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~--~~~~~~~~~~~~~~-~~-~~~--~~~~~i~v~ 152 (232)
++|+.+|..+|+.+..+.+..+++++++||+.+|||+...... ....++..+..+.+ .. .++ ..++++|++
T Consensus 140 ---~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 216 (314)
T COG0451 140 ---NPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVD 216 (314)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHH
Confidence 3899999999999999988779999999999999999776422 33444555666775 33 333 567999999
Q ss_pred hHHHHHHHhhcCCCCCceEEEec-C-cccHHHHHHHHHhhCC
Q 026820 153 DVAKAQVLLFETSAASGRYLCTN-G-IYQFAEFAEKVSKLFP 192 (232)
Q Consensus 153 D~a~~~~~~~~~~~~~~~~~~~~-~-~~s~~el~~~i~~~~p 192 (232)
|+++++..+++++... .|++++ . .++..|+++.+++.++
T Consensus 217 D~a~~~~~~~~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~ 257 (314)
T COG0451 217 DVADALLLALENPDGG-VFNIGSGTAEITVRELAEAVAEAVG 257 (314)
T ss_pred HHHHHHHHHHhCCCCc-EEEeCCCCCcEEHHHHHHHHHHHhC
Confidence 9999999999987766 887765 4 7999999999999883
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-23 Score=172.46 Aligned_cols=192 Identities=36% Similarity=0.545 Sum_probs=134.4
Q ss_pred CeEEEeecCCCCCC--CCCchhhhH-----HHHHHHHHHHHHHHHHc-CCCEEEEecccceeccCCCCC--CCCccCCCC
Q 026820 1 MGVFHLASPNTLDD--PKDPEKELL-----IPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNWP--QGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~~--~~~~~~~~~-----~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~--~~~~~~E~~ 70 (232)
|+|||+|+...... ...++...+ +.|+.++.+|+++|.+. ++++||++||. .+|+..... ...+++|+.
T Consensus 81 d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~-~vyg~~~~~~~~~~~~~E~~ 159 (353)
T PLN02896 81 DGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSI-STLTAKDSNGRWRAVVDETC 159 (353)
T ss_pred CEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEech-hhccccccCCCCCCccCccc
Confidence 78999999865421 223344443 44569999999999887 48899999997 677743211 013467763
Q ss_pred CCCcc---cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccC---C-
Q 026820 71 WTDLD---FCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQE---H- 143 (232)
Q Consensus 71 ~~~~~---~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~---~- 143 (232)
+.... .+.++.++|+.||.++|+++..+++..+++++++||+++|||............+.....|....++ .
T Consensus 160 ~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 239 (353)
T PLN02896 160 QTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAV 239 (353)
T ss_pred CCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcccccccccc
Confidence 22111 0112335899999999999999998889999999999999998654333222222222334322111 1
Q ss_pred ----cccCceeHHhHHHHHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhCCC
Q 026820 144 ----YWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLFPE 193 (232)
Q Consensus 144 ----~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~p~ 193 (232)
+.++|+|++|+|++++.++..+...+.|++++..+++.|+++.+++.+|.
T Consensus 240 ~~~~~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 240 NSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPC 293 (353)
T ss_pred ccccCceeEEeHHHHHHHHHHHHhCCCcCccEEecCCCCCHHHHHHHHHHhCCC
Confidence 24699999999999999998765556788888889999999999998853
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.3e-24 Score=171.02 Aligned_cols=182 Identities=19% Similarity=0.206 Sum_probs=145.7
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCC-EEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVR-RVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+|+..........+..++++|+.++.+++++|.+.+.+ ++|++||. .+|+.... ..+++|+.+..+.
T Consensus 75 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~-~v~g~~~~--~~~~~e~~~~~~~---- 147 (317)
T TIGR01181 75 DAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTD-EVYGDLEK--GDAFTETTPLAPS---- 147 (317)
T ss_pred CEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeecc-ceeCCCCC--CCCcCCCCCCCCC----
Confidence 7999999987653334456788999999999999999987433 89999997 67776432 2257788776665
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCC--cccCceeHHhHHH
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEH--YWLGAVHVKDVAK 156 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~ 156 (232)
+.|+.+|..+|.++..++.+.+++++++||+.+||+..... ..+..++.++..++++. +++ ..++|+|++|+++
T Consensus 148 --~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~ 224 (317)
T TIGR01181 148 --SPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCR 224 (317)
T ss_pred --CchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHH
Confidence 58999999999999998888899999999999999976543 45667777777777655 443 6789999999999
Q ss_pred HHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 157 AQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
++..++.+...++.|+++ ++.+++.|+++.+.+.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~ 261 (317)
T TIGR01181 225 AIYLVLEKGRVGETYNIGGGNERTNLEVVETILELLG 261 (317)
T ss_pred HHHHHHcCCCCCceEEeCCCCceeHHHHHHHHHHHhC
Confidence 999999765544578764 677999999999999984
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.7e-24 Score=169.26 Aligned_cols=172 Identities=16% Similarity=0.091 Sum_probs=134.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||||+......+...+...+.+|+.++.+|+++|++.|+ ++||+||. .+|+... ..+++|+++..|.
T Consensus 56 D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~-~Vy~~~~---~~p~~E~~~~~P~----- 125 (299)
T PRK09987 56 DVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTD-YVFPGTG---DIPWQETDATAPL----- 125 (299)
T ss_pred CEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccc-eEECCCC---CCCcCCCCCCCCC-----
Confidence 799999999876445556778889999999999999999996 79999997 6787654 3468999887776
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCC----cccCceeHHhHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEH----YWLGAVHVKDVA 155 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~i~v~D~a 155 (232)
+.|+.+|..+|+++..+ ..+++|+|++++|||... +.+..++..+..+.++. +++ ..+.+.+++|++
T Consensus 126 -~~Yg~sK~~~E~~~~~~----~~~~~ilR~~~vyGp~~~---~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~ 197 (299)
T PRK09987 126 -NVYGETKLAGEKALQEH----CAKHLIFRTSWVYAGKGN---NFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTA 197 (299)
T ss_pred -CHHHHHHHHHHHHHHHh----CCCEEEEecceecCCCCC---CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHH
Confidence 59999999999998765 346799999999999643 35566666666666655 544 334556777888
Q ss_pred HHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhh
Q 026820 156 KAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKL 190 (232)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~ 190 (232)
.++..++......++||++ ++.+|+.|+++.+.+.
T Consensus 198 ~~~~~~~~~~~~~giyni~~~~~~s~~e~~~~i~~~ 233 (299)
T PRK09987 198 HAIRVALNKPEVAGLYHLVASGTTTWHDYAALVFEE 233 (299)
T ss_pred HHHHHhhccCCCCCeEEeeCCCCccHHHHHHHHHHH
Confidence 8888877665445788765 6779999999998764
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=168.62 Aligned_cols=164 Identities=30% Similarity=0.374 Sum_probs=135.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+..........+....+.|+.++.+++++|.+.+++++|++||. .+|+... ..+++|+++..+.
T Consensus 67 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~-~~y~~~~---~~~~~e~~~~~~~----- 137 (236)
T PF01370_consen 67 DVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSA-SVYGDPD---GEPIDEDSPINPL----- 137 (236)
T ss_dssp SEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEG-GGGTSSS---SSSBETTSGCCHS-----
T ss_pred eEEEEeecccccccccccccccccccccccccccccccccccccccccccc-ccccccc---ccccccccccccc-----
Confidence 789999998531001135688899999999999999999998999999996 7888774 5568999888666
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCC--CCCCCChhHHHHHHHHhCCCCc-c--CCcccCceeHHhHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF--PQPYVNASGAVLQRLLQGSKDT-Q--EHYWLGAVHVKDVA 155 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~--~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a 155 (232)
++|+.+|..+|++++.+.+.++++++++||+.+||+. .......+..++.++.+++++. + +++.++++|++|+|
T Consensus 138 -~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 216 (236)
T PF01370_consen 138 -SPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLA 216 (236)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHH
T ss_pred -cccccccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHH
Confidence 5899999999999999998889999999999999998 1122357778899999888765 3 44789999999999
Q ss_pred HHHHHhhcCCC-CCceEEEe
Q 026820 156 KAQVLLFETSA-ASGRYLCT 174 (232)
Q Consensus 156 ~~~~~~~~~~~-~~~~~~~~ 174 (232)
++++.+++++. ..+.||++
T Consensus 217 ~~~~~~~~~~~~~~~~yNig 236 (236)
T PF01370_consen 217 EAIVAALENPKAAGGIYNIG 236 (236)
T ss_dssp HHHHHHHHHSCTTTEEEEES
T ss_pred HHHHHHHhCCCCCCCEEEeC
Confidence 99999999988 45578763
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=166.79 Aligned_cols=175 Identities=19% Similarity=0.166 Sum_probs=139.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+..........+...++.|+.++.+++++|++.+. ++|++||. .+|+... ..+++|+++..+.
T Consensus 52 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~-~vy~~~~---~~~~~E~~~~~~~----- 121 (287)
T TIGR01214 52 DAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTD-YVFDGEG---KRPYREDDATNPL----- 121 (287)
T ss_pred CEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeee-eeecCCC---CCCCCCCCCCCCc-----
Confidence 789999998654333345677889999999999999998885 89999997 6776543 4468888876665
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~ 159 (232)
+.|+.+|..+|+++..+ +.+++|+||+.+||+.... .....++..+..++++. .++..++++|++|+++++.
T Consensus 122 -~~Y~~~K~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~ 194 (287)
T TIGR01214 122 -NVYGQSKLAGEQAIRAA----GPNALIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIA 194 (287)
T ss_pred -chhhHHHHHHHHHHHHh----CCCeEEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHH
Confidence 58999999999997764 7899999999999997432 34455666666666555 5667789999999999999
Q ss_pred HhhcCC-CCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 160 LLFETS-AASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 160 ~~~~~~-~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
.++... ...+.||++ ++.+++.|+++.+++.++
T Consensus 195 ~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~ 229 (287)
T TIGR01214 195 ALLQRLARARGVYHLANSGQCSWYEFAQAIFEEAG 229 (287)
T ss_pred HHHhhccCCCCeEEEECCCCcCHHHHHHHHHHHhC
Confidence 999876 345677665 677999999999999984
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.2e-25 Score=173.77 Aligned_cols=173 Identities=23% Similarity=0.211 Sum_probs=128.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+||||||.++...++..++..+++|+.++.+|+++|.+.|+ ++||+||. .||++.. +.+++|++++.|.
T Consensus 53 d~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd-~VFdG~~---~~~y~E~d~~~P~----- 122 (286)
T PF04321_consen 53 DVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTD-YVFDGDK---GGPYTEDDPPNPL----- 122 (286)
T ss_dssp SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEG-GGS-SST---SSSB-TTS----S-----
T ss_pred CeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeecc-EEEcCCc---ccccccCCCCCCC-----
Confidence 799999999877666678899999999999999999999997 89999997 5665543 4568999998887
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~ 159 (232)
+.||++|.++|+.+.+. .-+++|+|++++||+.. .+.+..++..+..++.+. ..+..++++|++|+|+++.
T Consensus 123 -~~YG~~K~~~E~~v~~~----~~~~~IlR~~~~~g~~~---~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~ 194 (286)
T PF04321_consen 123 -NVYGRSKLEGEQAVRAA----CPNALILRTSWVYGPSG---RNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVIL 194 (286)
T ss_dssp -SHHHHHHHHHHHHHHHH-----SSEEEEEE-SEESSSS---SSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHh----cCCEEEEecceecccCC---CchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHH
Confidence 69999999999998874 33899999999999932 246677777777777777 6778889999999999999
Q ss_pred HhhcCCCC----CceEEEe-cCcccHHHHHHHHHhhC
Q 026820 160 LLFETSAA----SGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 160 ~~~~~~~~----~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
.++++... .|+|+++ ++.+|+.|+++.+++.+
T Consensus 195 ~l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~ 231 (286)
T PF04321_consen 195 ELIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKIL 231 (286)
T ss_dssp HHHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHH
T ss_pred HHHHhcccccccceeEEEecCcccCHHHHHHHHHHHh
Confidence 99987543 5788665 57799999999999886
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-22 Score=162.54 Aligned_cols=183 Identities=32% Similarity=0.413 Sum_probs=140.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+.... ....+...++.|+.++.+++++|.+.+++++|++||. .+|+.... +.+++|+.+..+. ..
T Consensus 66 d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~-~~~~~~~~--~~~~~e~~~~~~~---~~ 137 (328)
T TIGR03466 66 RALFHVAADYRL--WAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSV-ATLGVRGD--GTPADETTPSSLD---DM 137 (328)
T ss_pred CEEEEeceeccc--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEech-hhcCcCCC--CCCcCccCCCCcc---cc
Confidence 789999986542 2345778899999999999999999999999999997 66764221 3457888765543 11
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVL 160 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 160 (232)
.+.|+.+|..+|+++..+..+.+++++++||+.+||++.... .....++.....+......+...+++|++|+|+++..
T Consensus 138 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~ 216 (328)
T TIGR03466 138 IGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKP-TPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLL 216 (328)
T ss_pred cChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCC-CcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHH
Confidence 247999999999999998877899999999999999975432 1223344444454443344556799999999999999
Q ss_pred hhcCCCCCceEEEecCcccHHHHHHHHHhhCC
Q 026820 161 LFETSAASGRYLCTNGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~p 192 (232)
++.+...+..|+++++.+++.|+++.+.+.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g 248 (328)
T TIGR03466 217 ALERGRIGERYILGGENLTLKQILDKLAEITG 248 (328)
T ss_pred HHhCCCCCceEEecCCCcCHHHHHHHHHHHhC
Confidence 99875433368888888999999999999883
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-22 Score=166.37 Aligned_cols=186 Identities=18% Similarity=0.164 Sum_probs=139.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+..........+...++.|+.++.+++++|.+.+++++|++||. .+|+... +.+++|+.+..+.
T Consensus 83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~-~vyg~~~---~~~~~E~~~~~~~----- 153 (352)
T PLN02240 83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSA-TVYGQPE---EVPCTEEFPLSAT----- 153 (352)
T ss_pred CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccH-HHhCCCC---CCCCCCCCCCCCC-----
Confidence 789999997654333345678899999999999999999898999999996 7787543 4568999877775
Q ss_pred chhHHHHHHHHHHHHHHHHHH-cCCcEEEEcCCCeeCCCCCC-------C-CChhHHHHHHHHhCCC--Cc-c-------
Q 026820 81 KIWYSMSKTLAEKAAWEFAEK-NGTDVVAIHPATSLGPFPQP-------Y-VNASGAVLQRLLQGSK--DT-Q------- 141 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~i~G~~~~~-------~-~~~~~~~~~~~~~~~~--~~-~------- 141 (232)
+.|+.+|..+|++++.++.. .+++++++|++++||+.... . ...+..++.++..++. +. +
T Consensus 154 -~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 232 (352)
T PLN02240 154 -NPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTK 232 (352)
T ss_pred -CHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCC
Confidence 59999999999999987654 57899999999999975321 0 1123344555554432 11 2
Q ss_pred -CCcccCceeHHhHHHHHHHhhcCC----CCC-ceEEE-ecCcccHHHHHHHHHhhCCCCCCc
Q 026820 142 -EHYWLGAVHVKDVAKAQVLLFETS----AAS-GRYLC-TNGIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 142 -~~~~~~~i~v~D~a~~~~~~~~~~----~~~-~~~~~-~~~~~s~~el~~~i~~~~p~~~~~ 197 (232)
|.+.++|+|++|+|++++.++... ... +.||+ +++++|++|+++.+++.+ +.+.+
T Consensus 233 ~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~-g~~~~ 294 (352)
T PLN02240 233 DGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKAS-GKKIP 294 (352)
T ss_pred CCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHh-CCCCC
Confidence 246789999999999998887542 233 36876 478899999999999988 43333
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-23 Score=167.97 Aligned_cols=179 Identities=16% Similarity=0.075 Sum_probs=140.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCC-----EEEEecccceeccCCCCCCCCccCCCCCCCcc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVR-----RVVLTSSISSIVPNPNWPQGKVIDETSWTDLD 75 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-----~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~ 75 (232)
|+|||+|+..+.......+...++.|+.++.+++++|.+.+++ +||++||. .+||.... +++|+.+..|.
T Consensus 85 d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~-~vyg~~~~----~~~E~~~~~p~ 159 (340)
T PLN02653 85 DEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSS-EMYGSTPP----PQSETTPFHPR 159 (340)
T ss_pred CEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccH-HHhCCCCC----CCCCCCCCCCC
Confidence 7899999986653233446677899999999999999988765 89999986 77886542 57888877665
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC--ChhHHHHHHHHhCCCCc--cC--CcccCce
Q 026820 76 FCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV--NASGAVLQRLLQGSKDT--QE--HYWLGAV 149 (232)
Q Consensus 76 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~--~~--~~~~~~i 149 (232)
+.|+.||..+|.++..++++.+++++..|+.++|||+..... ..+..++.++..+.+.. .| ++.++|+
T Consensus 160 ------~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i 233 (340)
T PLN02653 160 ------SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWG 233 (340)
T ss_pred ------ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecce
Confidence 599999999999999998888999999999999998644321 12334445555666443 34 4689999
Q ss_pred eHHhHHHHHHHhhcCCCCCceEEE-ecCcccHHHHHHHHHhhC
Q 026820 150 HVKDVAKAQVLLFETSAASGRYLC-TNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~ 191 (232)
|++|+|++++.++++.. .+.||+ +++++|++|+++.+.+.+
T Consensus 234 ~v~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~ 275 (340)
T PLN02653 234 FAGDYVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYV 275 (340)
T ss_pred eHHHHHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHc
Confidence 99999999999998653 356766 577899999999999887
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.6e-23 Score=157.15 Aligned_cols=185 Identities=23% Similarity=0.290 Sum_probs=156.7
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|-|||+|+..++......+-.....|+.++.+++..|++.+ +||++.||+ .+||++. ..+..|+.+..... ..+
T Consensus 93 D~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTs-eVYgdp~---~hpq~e~ywg~vnp-igp 166 (350)
T KOG1429|consen 93 DQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTS-EVYGDPL---VHPQVETYWGNVNP-IGP 166 (350)
T ss_pred hhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecc-cccCCcc---cCCCccccccccCc-CCc
Confidence 67999999999877778888999999999999999999999 699999996 9999866 56677777665543 566
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC-CChhHHHHHHHHhCCCCc-cCC--cccCceeHHhHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY-VNASGAVLQRLLQGSKDT-QEH--YWLGAVHVKDVAK 156 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~ 156 (232)
++.|...|+.+|.++..|.++.|+.+.|.|++++|||...-. ...+..++.+.+++.++. +|+ +.|+|.||+|+++
T Consensus 167 r~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Ve 246 (350)
T KOG1429|consen 167 RSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVE 246 (350)
T ss_pred hhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHH
Confidence 789999999999999999999999999999999999986443 345677788889999888 666 7889999999999
Q ss_pred HHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhC
Q 026820 157 AQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~ 191 (232)
+++++.+.+.....++.+++..|+.|+++.+.+..
T Consensus 247 gll~Lm~s~~~~pvNiGnp~e~Tm~elAemv~~~~ 281 (350)
T KOG1429|consen 247 GLLRLMESDYRGPVNIGNPGEFTMLELAEMVKELI 281 (350)
T ss_pred HHHHHhcCCCcCCcccCCccceeHHHHHHHHHHHc
Confidence 99999977754443344567799999999998765
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.2e-23 Score=164.82 Aligned_cols=177 Identities=17% Similarity=0.130 Sum_probs=135.7
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC-Ccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT-DLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~-~~~~~~~ 79 (232)
|+|||+|+.... ...++...++.|+.++.+++++|.+.++ +||++||. .+|+.... +.+|++++ .|.
T Consensus 68 D~vvh~A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~-~vy~~~~~----~~~e~~~~~~p~---- 135 (314)
T TIGR02197 68 EAIFHQGACSDT--TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSA-ATYGDGEA----GFREGRELERPL---- 135 (314)
T ss_pred CEEEECccccCc--cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccH-HhcCCCCC----CcccccCcCCCC----
Confidence 799999997543 2345678889999999999999999886 79999997 67876432 35566543 233
Q ss_pred cchhHHHHHHHHHHHHHHHHH--HcCCcEEEEcCCCeeCCCCCCCC---ChhHHHHHHHHhCCCCc-c--------CCcc
Q 026820 80 HKIWYSMSKTLAEKAAWEFAE--KNGTDVVAIHPATSLGPFPQPYV---NASGAVLQRLLQGSKDT-Q--------EHYW 145 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~--~~~~~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~-~--------~~~~ 145 (232)
+.|+.+|..+|.+++++.. ..+++++++|++.+||++..... ..+..++.++..+.++. + |++.
T Consensus 136 --~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 213 (314)
T TIGR02197 136 --NVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQL 213 (314)
T ss_pred --CHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCce
Confidence 5899999999999987543 33679999999999999854321 23445666666666553 2 3356
Q ss_pred cCceeHHhHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 146 LGAVHVKDVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
++++|++|+++++..++.. ...+.||++ ++++|++|+++.+.+.++
T Consensus 214 ~~~i~v~D~a~~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g 260 (314)
T TIGR02197 214 RDFVYVKDVVDVNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALG 260 (314)
T ss_pred eeeEEHHHHHHHHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhC
Confidence 8999999999999999987 445678765 578999999999999883
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-22 Score=162.81 Aligned_cols=181 Identities=17% Similarity=0.148 Sum_probs=134.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC-Ccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT-DLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~-~~~~~~~ 79 (232)
|+|||+|+..........+.+.+..|+.++.+++++|++.+++++|++||. .+|+... ..+++|+++. .|.
T Consensus 75 d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~-~~yg~~~---~~~~~E~~~~~~p~---- 146 (338)
T PRK10675 75 DTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSA-TVYGDQP---KIPYVESFPTGTPQ---- 146 (338)
T ss_pred CEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccH-HhhCCCC---CCccccccCCCCCC----
Confidence 789999998654222234567899999999999999999999999999997 6787543 3457888775 343
Q ss_pred cchhHHHHHHHHHHHHHHHHHHc-CCcEEEEcCCCeeCCCCCCC--------CChhHHHHHHHHhCCC--Cc-c------
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKN-GTDVVAIHPATSLGPFPQPY--------VNASGAVLQRLLQGSK--DT-Q------ 141 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~~~--------~~~~~~~~~~~~~~~~--~~-~------ 141 (232)
+.|+.+|..+|+++.+++++. +++++++|++.+||+..... ...+..++.++..+.. +. +
T Consensus 147 --~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
T PRK10675 147 --SPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT 224 (338)
T ss_pred --ChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCC
Confidence 589999999999999987654 89999999999999742210 0122334455554432 11 2
Q ss_pred --CCcccCceeHHhHHHHHHHhhcCC--CCC-ceEEEe-cCcccHHHHHHHHHhhC
Q 026820 142 --EHYWLGAVHVKDVAKAQVLLFETS--AAS-GRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 142 --~~~~~~~i~v~D~a~~~~~~~~~~--~~~-~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+.+.++|+|++|+|++++.++... ... +.||++ ++.+|++|+++.+.+.+
T Consensus 225 ~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 280 (338)
T PRK10675 225 EDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKAC 280 (338)
T ss_pred CCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHh
Confidence 236789999999999999988652 223 368775 67799999999999998
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-22 Score=169.14 Aligned_cols=190 Identities=17% Similarity=0.189 Sum_probs=134.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc-CCCEEEEecccceeccCCCCC-CCCccCCCC-CC-----
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNWP-QGKVIDETS-WT----- 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~-~~~~~~E~~-~~----- 72 (232)
|+|||+|+...+ ..++....+.|+.||.+|+++|++. ++++|||+||. .+||..... +..++++.. +.
T Consensus 114 D~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~-~vyG~~~~~i~E~~~~~~~~~~~~~~~ 189 (491)
T PLN02996 114 DIVVNLAATTNF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTA-YVCGEKSGLILEKPFHMGETLNGNRKL 189 (491)
T ss_pred CEEEECccccCC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeee-EEecCCCceeeeecCCCcccccccccC
Confidence 789999999876 4567889999999999999999986 78899999996 778764311 111111100 00
Q ss_pred -----------------------------------CcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCC
Q 026820 73 -----------------------------------DLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGP 117 (232)
Q Consensus 73 -----------------------------------~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~ 117 (232)
.+.......+.|+.||..+|+++.++. .+++++|+||++|||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~~--~~lpv~i~RP~~V~G~ 267 (491)
T PLN02996 190 DINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNFK--ENLPLVIIRPTMITST 267 (491)
T ss_pred ChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHhc--CCCCEEEECCCEeccC
Confidence 000011234679999999999998764 4899999999999998
Q ss_pred CCCCCCCh------hHHHHHHHHhCCCCc-cC--CcccCceeHHhHHHHHHHhhcCC--C-CCc-eEEEe-c--CcccHH
Q 026820 118 FPQPYVNA------SGAVLQRLLQGSKDT-QE--HYWLGAVHVKDVAKAQVLLFETS--A-ASG-RYLCT-N--GIYQFA 181 (232)
Q Consensus 118 ~~~~~~~~------~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~~~~~~~~--~-~~~-~~~~~-~--~~~s~~ 181 (232)
...+..+. ...++..+.+|.... .+ ++.+|++||+|++++++.++... . ..+ +||++ + .++++.
T Consensus 268 ~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ 347 (491)
T PLN02996 268 YKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFS 347 (491)
T ss_pred CcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCcccHH
Confidence 86552221 233444445555543 34 47899999999999999988653 1 223 68775 5 579999
Q ss_pred HHHHHHHhhCCCCCC
Q 026820 182 EFAEKVSKLFPEYPI 196 (232)
Q Consensus 182 el~~~i~~~~p~~~~ 196 (232)
|+++.+.+.+...++
T Consensus 348 ei~~~~~~~~~~~p~ 362 (491)
T PLN02996 348 NLHDFAYRYFSKNPW 362 (491)
T ss_pred HHHHHHHHHhhhCCC
Confidence 999999887644444
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-22 Score=159.87 Aligned_cols=210 Identities=22% Similarity=0.224 Sum_probs=151.1
Q ss_pred eEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccc
Q 026820 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHK 81 (232)
Q Consensus 2 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~ 81 (232)
.|+|||+.........+++..+++|++||++++++|.+.|++++||+||..+++++... ...+|+.+.. ..+.
T Consensus 78 ~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~---~n~~E~~p~p----~~~~ 150 (361)
T KOG1430|consen 78 VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPI---INGDESLPYP----LKHI 150 (361)
T ss_pred eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeec---ccCCCCCCCc----cccc
Confidence 47888888766555656899999999999999999999999999999999777766541 1234544332 1223
Q ss_pred hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cC--CcccCceeHHhHHHHH
Q 026820 82 IWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QE--HYWLGAVHVKDVAKAQ 158 (232)
Q Consensus 82 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~~ 158 (232)
+.|+.||.++|+++.+.....++..++|||+.||||++.. .+..+..-+..|+... .+ +...+++++++++.+.
T Consensus 151 d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~---~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ah 227 (361)
T KOG1430|consen 151 DPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKR---LLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAH 227 (361)
T ss_pred cccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCcc---ccHHHHHHHHccCceEEeeccccccceEEechhHHHH
Confidence 5899999999999998765567999999999999998764 3344444444555444 33 3677999999999998
Q ss_pred HHhhc-----CCCCCc-eEEE-ecCcccHHHHHHHHHhhCCCCCCccceeccchhHHHHHHHHHHHHHHHHh
Q 026820 159 VLLFE-----TSAASG-RYLC-TNGIYQFAEFAEKVSKLFPEYPIHRFVCVCLGYLYFVNTWIFNFFWQRIA 223 (232)
Q Consensus 159 ~~~~~-----~~~~~~-~~~~-~~~~~s~~el~~~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (232)
+.+.. .+...| .|++ ++.++...++...+.+.+ ++..|. .....-.+....+.+.++.+..++
T Consensus 228 ilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~l-g~~~~~-~~~~p~~l~~~~~~l~e~~~~~l~ 297 (361)
T KOG1430|consen 228 ILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKAL-GYCLPS-SIKLPLFLSYFLAYLLEIVYFLLR 297 (361)
T ss_pred HHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhc-CCCCCc-eeecchHHHHHHHHHHHHHHHhcc
Confidence 87653 234556 3655 567776666666888888 777774 233333455555777777777666
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-21 Score=156.62 Aligned_cols=185 Identities=22% Similarity=0.202 Sum_probs=137.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||..........+.+.+..|+.++.+++++|.+.+++++|++||. .+|+... ..+++|+++..+.
T Consensus 72 d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~-~~~g~~~---~~~~~e~~~~~~~----- 142 (328)
T TIGR01179 72 DAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSA-AVYGEPS---SIPISEDSPLGPI----- 142 (328)
T ss_pred cEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecch-hhcCCCC---CCCccccCCCCCC-----
Confidence 789999998654333445667889999999999999999988899999986 6676543 3357888876665
Q ss_pred chhHHHHHHHHHHHHHHHHHH-cCCcEEEEcCCCeeCCCCCCC--------CChhHHHHHHHH-hCCCCc---------c
Q 026820 81 KIWYSMSKTLAEKAAWEFAEK-NGTDVVAIHPATSLGPFPQPY--------VNASGAVLQRLL-QGSKDT---------Q 141 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~i~G~~~~~~--------~~~~~~~~~~~~-~~~~~~---------~ 141 (232)
+.|+.+|..+|+++..++++ .+++++++||+.+||+...+. ...+..+..... ...++. .
T Consensus 143 -~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (328)
T TIGR01179 143 -NPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPD 221 (328)
T ss_pred -CchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCC
Confidence 58999999999999998776 799999999999999864321 112222222222 112111 2
Q ss_pred CCcccCceeHHhHHHHHHHhhcCC---CCCceEEEe-cCcccHHHHHHHHHhhCCCCCC
Q 026820 142 EHYWLGAVHVKDVAKAQVLLFETS---AASGRYLCT-NGIYQFAEFAEKVSKLFPEYPI 196 (232)
Q Consensus 142 ~~~~~~~i~v~D~a~~~~~~~~~~---~~~~~~~~~-~~~~s~~el~~~i~~~~p~~~~ 196 (232)
+++.++|+|++|+++++..++... ...+.|+++ ++.+|++|+++.+++.+ +.+.
T Consensus 222 g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~-g~~~ 279 (328)
T TIGR01179 222 GTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVS-GVDF 279 (328)
T ss_pred CceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHh-CCCc
Confidence 345689999999999999998653 223468774 67899999999999998 4443
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.87 E-value=7e-21 Score=151.68 Aligned_cols=176 Identities=20% Similarity=0.223 Sum_probs=125.7
Q ss_pred CeEEEeecCCCCC--CCCCchhhhHHHHHHHHHHHHHHHHHcCCC--EEEEecccceeccCCCCCCCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTLD--DPKDPEKELLIPAVQGTLNVLEAAKKFGVR--RVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~--~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~ 76 (232)
|+|||+||..... +....+..+++.|+.++++++++|++.+++ ++|+.||. .+|+... +.+++|+.+..+.
T Consensus 59 D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~-~~yg~~~---~~~~~E~~~~~~~- 133 (292)
T TIGR01777 59 DAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAV-GYYGTSE---DRVFTEEDSPAGD- 133 (292)
T ss_pred CEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeE-EEeCCCC---CCCcCcccCCCCC-
Confidence 7999999975431 122245678889999999999999999864 45555554 5677543 3457888754443
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHH--HhCCCCccCCcccCceeHHhH
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRL--LQGSKDTQEHYWLGAVHVKDV 154 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~v~D~ 154 (232)
+.|+..+...|..+..+ ++.+++++|+||+.+||+... ....+...+ ..+.++..++..++++|++|+
T Consensus 134 -----~~~~~~~~~~e~~~~~~-~~~~~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dv 203 (292)
T TIGR01777 134 -----DFLAELCRDWEEAAQAA-EDLGTRVVLLRTGIVLGPKGG----ALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDL 203 (292)
T ss_pred -----ChHHHHHHHHHHHhhhc-hhcCCceEEEeeeeEECCCcc----hhHHHHHHHhcCcccccCCCCcccccEeHHHH
Confidence 35666777777776653 456899999999999998632 222222211 122222245578999999999
Q ss_pred HHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 155 AKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 155 a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
|+++..++.++...+.|+++ ++.+|++|+++.+++.+
T Consensus 204 a~~i~~~l~~~~~~g~~~~~~~~~~s~~di~~~i~~~~ 241 (292)
T TIGR01777 204 VQLILFALENASISGPVNATAPEPVRNKEFAKALARAL 241 (292)
T ss_pred HHHHHHHhcCcccCCceEecCCCccCHHHHHHHHHHHh
Confidence 99999999876666778664 67799999999999998
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-20 Score=151.37 Aligned_cols=163 Identities=15% Similarity=0.093 Sum_probs=126.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.........++.+.+++|+.++.+++++|.+.+++++|++||... . .|.
T Consensus 76 D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~-----~-------------~p~----- 132 (324)
T TIGR03589 76 DYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA-----A-------------NPI----- 132 (324)
T ss_pred CEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC-----C-------------CCC-----
Confidence 79999999865433344567899999999999999999999889999998521 0 111
Q ss_pred chhHHHHHHHHHHHHHHHH---HHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCC-CCc--cCCcccCceeHHhH
Q 026820 81 KIWYSMSKTLAEKAAWEFA---EKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGS-KDT--QEHYWLGAVHVKDV 154 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~i~v~D~ 154 (232)
++|+.+|..+|+++..+. ...|++++++||+++|||.. ..+..+...+..+. ++. .+++.++|+|++|+
T Consensus 133 -~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~----~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~ 207 (324)
T TIGR03589 133 -NLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG----SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQG 207 (324)
T ss_pred -CHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC----CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHH
Confidence 489999999999987754 35699999999999999863 24455555555564 333 24467899999999
Q ss_pred HHHHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhC
Q 026820 155 AKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 155 a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~ 191 (232)
+++++.++++......|+.++..+++.|+++.+.+..
T Consensus 208 a~a~~~al~~~~~~~~~~~~~~~~sv~el~~~i~~~~ 244 (324)
T TIGR03589 208 VNFVLKSLERMLGGEIFVPKIPSMKITDLAEAMAPEC 244 (324)
T ss_pred HHHHHHHHhhCCCCCEEccCCCcEEHHHHHHHHHhhC
Confidence 9999999976533335766667799999999999876
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-20 Score=164.37 Aligned_cols=177 Identities=22% Similarity=0.166 Sum_probs=128.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+||||||..+. ........+.|+.++.+++++|.+.++++|||+||. .+|+.... ..+|+.+..+. ..
T Consensus 79 D~Vih~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~-~v~g~~~~----~~~e~~~~~~~---~~ 147 (657)
T PRK07201 79 DHVVHLAAIYDL---TADEEAQRAANVDGTRNVVELAERLQAATFHHVSSI-AVAGDYEG----VFREDDFDEGQ---GL 147 (657)
T ss_pred CEEEECceeecC---CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEecc-ccccCccC----ccccccchhhc---CC
Confidence 799999998765 445677889999999999999999989999999997 66765332 24555432221 12
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCC------hhHHHHHHHHhCCC---Cc-cCCcccCcee
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVN------ASGAVLQRLLQGSK---DT-QEHYWLGAVH 150 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~------~~~~~~~~~~~~~~---~~-~~~~~~~~i~ 150 (232)
.++|+.+|.++|+++.+ ..+++++|+||+.+||+...+... .+...+..+..... .. .+++.++++|
T Consensus 148 ~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 224 (657)
T PRK07201 148 PTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVP 224 (657)
T ss_pred CCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeee
Confidence 35899999999999864 358999999999999986543211 11223333311111 11 1235679999
Q ss_pred HHhHHHHHHHhhcCCCCCc-eEEEe-cCcccHHHHHHHHHhhC
Q 026820 151 VKDVAKAQVLLFETSAASG-RYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 151 v~D~a~~~~~~~~~~~~~~-~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
++|+++++..++..+...+ .|+++ ++++++.|+++.+++.+
T Consensus 225 vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~ 267 (657)
T PRK07201 225 VDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAA 267 (657)
T ss_pred HHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHh
Confidence 9999999999987655555 68775 57899999999999998
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.9e-20 Score=149.66 Aligned_cols=180 Identities=21% Similarity=0.136 Sum_probs=128.7
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+.... ..+.....+.|+.++.+++++|.+.+++++|++||. .+|+..... ...|+.+..... ...
T Consensus 90 d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~-~v~~~~~~~---~~~~~~~~~~~~-~~~ 161 (367)
T TIGR01746 90 DTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTI-SVLAAIDLS---TVTEDDAIVTPP-PGL 161 (367)
T ss_pred CEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccc-cccCCcCCC---Cccccccccccc-ccc
Confidence 789999998765 455678889999999999999999988899999998 555543211 133443322211 112
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCC---hhHHHHHHHHhCCCCccCC-cccCceeHHhHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVN---ASGAVLQRLLQGSKDTQEH-YWLGAVHVKDVAK 156 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~ 156 (232)
.+.|+.+|+.+|.++..+.+. |++++++||+.++|+...+... .+..++......+.....+ ..++++|++|+++
T Consensus 162 ~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ 240 (367)
T TIGR01746 162 AGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVAR 240 (367)
T ss_pred CCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHH
Confidence 358999999999999886544 9999999999999975433221 2233333333333222222 3578999999999
Q ss_pred HHHHhhcCCCC---CceEEEe-cCcccHHHHHHHHHh
Q 026820 157 AQVLLFETSAA---SGRYLCT-NGIYQFAEFAEKVSK 189 (232)
Q Consensus 157 ~~~~~~~~~~~---~~~~~~~-~~~~s~~el~~~i~~ 189 (232)
+++.++..+.. .+.|++. ++++++.|+++.+.+
T Consensus 241 ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~ 277 (367)
T TIGR01746 241 AIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER 277 (367)
T ss_pred HHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH
Confidence 99999876653 3468765 577999999999998
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.4e-20 Score=145.79 Aligned_cols=171 Identities=14% Similarity=0.181 Sum_probs=125.0
Q ss_pred CeEEEeecCCCCC---CCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCC-CC--CCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLD---DPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPN-WP--QGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~---~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~-~~--~~~~~~E~~~~~~ 74 (232)
|+||||||..+.. ++...+.++++.|+.++.+|+++|++.|++ ++++||. .+|+... .+ ...+++|++++.+
T Consensus 59 D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~-~vy~~~~~~p~~~~~~~~Ee~~p~~ 136 (298)
T PLN02778 59 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATG-CIFEYDDAHPLGSGIGFKEEDTPNF 136 (298)
T ss_pred CEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecc-eEeCCCCCCCcccCCCCCcCCCCCC
Confidence 7999999987541 234567899999999999999999999986 4555654 5565321 11 1234777765443
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHh
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKD 153 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D 153 (232)
. .+.|+.+|..+|+++..++ +..++|++..+|++.. ....++..++.+..+. .+ .+|+|++|
T Consensus 137 ~-----~s~Yg~sK~~~E~~~~~y~-----~~~~lr~~~~~~~~~~----~~~~fi~~~~~~~~~~~~~---~s~~yv~D 199 (298)
T PLN02778 137 T-----GSFYSKTKAMVEELLKNYE-----NVCTLRVRMPISSDLS----NPRNFITKITRYEKVVNIP---NSMTILDE 199 (298)
T ss_pred C-----CCchHHHHHHHHHHHHHhh-----ccEEeeecccCCcccc----cHHHHHHHHHcCCCeeEcC---CCCEEHHH
Confidence 2 2689999999999988764 4578898887876422 1223567777776543 33 37999999
Q ss_pred HHHHHHHhhcCCCCCceEEE-ecCcccHHHHHHHHHhhC
Q 026820 154 VAKAQVLLFETSAASGRYLC-TNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 154 ~a~~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~ 191 (232)
++++++.++.... .|.||+ +++.+|+.|+++.+++.+
T Consensus 200 ~v~al~~~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~ 237 (298)
T PLN02778 200 LLPISIEMAKRNL-TGIYNFTNPGVVSHNEILEMYRDYI 237 (298)
T ss_pred HHHHHHHHHhCCC-CCeEEeCCCCcccHHHHHHHHHHHh
Confidence 9999999986543 468877 467799999999999998
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-20 Score=145.21 Aligned_cols=188 Identities=21% Similarity=0.210 Sum_probs=146.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCC-cccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD-LDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~-~~~~~~ 79 (232)
|.|+|+|+.-..+.+-+.|..++..|+.||.+|+++|++.+++.+|+.||+ .+||.+. ..|++|+++.. |.
T Consensus 79 d~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssa-tvYG~p~---~ip~te~~~t~~p~---- 150 (343)
T KOG1371|consen 79 DAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSA-TVYGLPT---KVPITEEDPTDQPT---- 150 (343)
T ss_pred ceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecce-eeecCcc---eeeccCcCCCCCCC----
Confidence 789999999888666667899999999999999999999999999999987 8899887 57799999887 44
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeC--CCCCCCC------ChhHHHHHHHHh---------CCCCc--
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLG--PFPQPYV------NASGAVLQRLLQ---------GSKDT-- 140 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G--~~~~~~~------~~~~~~~~~~~~---------~~~~~-- 140 (232)
++|+.+|...|+++..+....+..++.||.++++| |...... +.+...+.+... |.+..
T Consensus 151 --~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~ 228 (343)
T KOG1371|consen 151 --NPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTI 228 (343)
T ss_pred --CcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCccccc
Confidence 79999999999999999888899999999999999 3322110 011101111111 22222
Q ss_pred cCCcccCceeHHhHHHHHHHhhcCCCCCc---eEEE-ecCcccHHHHHHHHHhhCCCCCCccc
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFETSAASG---RYLC-TNGIYQFAEFAEKVSKLFPEYPIHRF 199 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~---~~~~-~~~~~s~~el~~~i~~~~p~~~~~~~ 199 (232)
.|+..++++|+-|.++....++.+..... +||. ++...+..++...+++.. +..+|..
T Consensus 229 dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~-g~~~k~~ 290 (343)
T KOG1371|consen 229 DGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKAL-GVKIKKK 290 (343)
T ss_pred CCCeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHh-cCCCCcc
Confidence 34578999999999999999998765432 5765 577899999999999987 5444433
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=137.45 Aligned_cols=175 Identities=21% Similarity=0.264 Sum_probs=138.4
Q ss_pred CeEEEeecCCCC--CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTL--DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~ 76 (232)
|+|||+||..-. +|..+..+.+.+.-++.|+.|.++..+. +.+.+|.-|.+ .+||... +..++|+++....
T Consensus 58 DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAv-GyYG~~~---~~~~tE~~~~g~~- 132 (297)
T COG1090 58 DAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAV-GYYGHSG---DRVVTEESPPGDD- 132 (297)
T ss_pred CEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceE-EEecCCC---ceeeecCCCCCCC-
Confidence 899999999766 5777778899999999999999998855 55566665554 7788776 7789999655544
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHH--HHHHHhCCCCccCCcccCceeHHhH
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAV--LQRLLQGSKDTQEHYWLGAVHVKDV 154 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~v~D~ 154 (232)
--+..-...|+.... ++..|.+++++|.|.|.|+.. +.+..+ +.++.-|+++..|.++++|||++|+
T Consensus 133 ------Fla~lc~~WE~~a~~-a~~~gtRvvllRtGvVLs~~G----GaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~ 201 (297)
T COG1090 133 ------FLAQLCQDWEEEALQ-AQQLGTRVVLLRTGVVLSPDG----GALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDL 201 (297)
T ss_pred ------hHHHHHHHHHHHHhh-hhhcCceEEEEEEEEEecCCC----cchhhhcchhhhccCCccCCCCceeeeeeHHHH
Confidence 355566666777666 456699999999999999763 334333 3344556666666689999999999
Q ss_pred HHHHHHhhcCCCCCceEEE-ecCcccHHHHHHHHHhhC
Q 026820 155 AKAQVLLFETSAASGRYLC-TNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 155 a~~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~ 191 (232)
++++..++++....|.||+ ++.|++..+|.+++.+.+
T Consensus 202 v~~I~fll~~~~lsGp~N~taP~PV~~~~F~~al~r~l 239 (297)
T COG1090 202 VNAILFLLENEQLSGPFNLTAPNPVRNKEFAHALGRAL 239 (297)
T ss_pred HHHHHHHHhCcCCCCcccccCCCcCcHHHHHHHHHHHh
Confidence 9999999999999998766 578999999999999998
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.6e-21 Score=147.61 Aligned_cols=163 Identities=20% Similarity=0.146 Sum_probs=127.7
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+.-+...++..|.+....|+.||+|++++|.+.++++||++||.-++. |.
T Consensus 79 diVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~------------------Pt----- 135 (293)
T PF02719_consen 79 DIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVN------------------PT----- 135 (293)
T ss_dssp SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS-------------------------
T ss_pred CEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCC------------------CC-----
Confidence 8999999999887788899999999999999999999999999999999974421 11
Q ss_pred chhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc--cCCcccCceeHHhHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT--QEHYWLGAVHVKDVA 155 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a 155 (232)
|.||.||+.+|+++..+.... +..++++|+|+|.|+. .+.++.+..++.+|+|+. .++..|-|+.+++++
T Consensus 136 -nvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~----GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv 210 (293)
T PF02719_consen 136 -NVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR----GSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAV 210 (293)
T ss_dssp -SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT----TSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHH
T ss_pred -cHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC----CcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHH
Confidence 699999999999999876544 6789999999999975 357788999999999987 556778899999999
Q ss_pred HHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 156 KAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+.++.++.....+.+|... |+++.+.|+++.+.+..
T Consensus 211 ~Lvl~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~ 247 (293)
T PF02719_consen 211 QLVLQAAALAKGGEIFVLDMGEPVKILDLAEAMIELS 247 (293)
T ss_dssp HHHHHHHHH--TTEEEEE---TCEECCCHHHHHHHHT
T ss_pred HHHHHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhc
Confidence 9999999777655578775 78999999999998887
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.8e-19 Score=147.69 Aligned_cols=163 Identities=20% Similarity=0.164 Sum_probs=142.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+.-+...++..|.+....|+.||+|++++|.+.|+++||.+||.-+++. .
T Consensus 327 d~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~P------------------t----- 383 (588)
T COG1086 327 DIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNP------------------T----- 383 (588)
T ss_pred ceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCC------------------c-----
Confidence 79999999999999999999999999999999999999999999999999866432 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc--cCCcccCceeHHhHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT--QEHYWLGAVHVKDVA 155 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a 155 (232)
|.||.||+.+|..+.++.++. +..++++|+|+|.|+.. +.++.+..++.+|+|+. .++..|-|+.++|++
T Consensus 384 -NvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG----SViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv 458 (588)
T COG1086 384 -NVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG----SVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAV 458 (588)
T ss_pred -hHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC----CCHHHHHHHHHcCCCccccCCCceeEEEEHHHHH
Confidence 689999999999999987633 37899999999999863 46777888899999988 555778899999999
Q ss_pred HHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 156 KAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+.++++......+.+|... |+++.+.|+++.+-+..
T Consensus 459 ~LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~ 495 (588)
T COG1086 459 QLVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELA 495 (588)
T ss_pred HHHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHh
Confidence 9999999776555588886 79999999999998777
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-20 Score=146.96 Aligned_cols=150 Identities=25% Similarity=0.222 Sum_probs=89.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCC----CCCCccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDET----SWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~----~~~~~~~ 76 (232)
|+||||||.+++ ..++.++++.|+.||++|++.|.+...++|+|+|| +.+.+..... ..|. .......
T Consensus 89 ~~IiH~Aa~v~~---~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iST-a~v~~~~~~~----~~~~~~~~~~~~~~~ 160 (249)
T PF07993_consen 89 DVIIHCAASVNF---NAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYIST-AYVAGSRPGT----IEEKVYPEEEDDLDP 160 (249)
T ss_dssp -EEEE--SS-SB---S-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEE-GGGTTS-TTT------SSS-HHH--EEE-
T ss_pred ceeeecchhhhh---cccchhhhhhHHHHHHHHHHHHHhccCcceEEecc-ccccCCCCCc----ccccccccccccchh
Confidence 789999999998 66788899999999999999999776679999999 4555544321 1111 0111111
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC---ChhHHHHHHHHh-CCCCc-cCC--cccCce
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV---NASGAVLQRLLQ-GSKDT-QEH--YWLGAV 149 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~-~~~~~-~~~--~~~~~i 149 (232)
.....++|..||+++|++++++.++.|++++|+||+.|+|....+.. .....++..... +..+. .++ ...|++
T Consensus 161 ~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~v 240 (249)
T PF07993_consen 161 PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDLV 240 (249)
T ss_dssp -TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--EE
T ss_pred hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeEE
Confidence 23444799999999999999988777999999999999995544322 223444444433 33332 222 468999
Q ss_pred eHHhHHHHH
Q 026820 150 HVKDVAKAQ 158 (232)
Q Consensus 150 ~v~D~a~~~ 158 (232)
+||.+|++|
T Consensus 241 PVD~va~aI 249 (249)
T PF07993_consen 241 PVDYVARAI 249 (249)
T ss_dssp EHHHHHHHH
T ss_pred CHHHHHhhC
Confidence 999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=144.05 Aligned_cols=145 Identities=19% Similarity=0.185 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 026820 27 VQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDV 106 (232)
Q Consensus 27 v~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 106 (232)
..++++|+++|++.|+++|||+||. .+|+... ..+..|+++..+. . +|..+|+++. +.++++
T Consensus 142 ~~~~~~ll~aa~~~gvkr~V~~SS~-~vyg~~~---~~p~~E~~~~~p~---------~-sK~~~E~~l~----~~~l~~ 203 (378)
T PLN00016 142 LDEVEPVADWAKSPGLKQFLFCSSA-GVYKKSD---EPPHVEGDAVKPK---------A-GHLEVEAYLQ----KLGVNW 203 (378)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEccH-hhcCCCC---CCCCCCCCcCCCc---------c-hHHHHHHHHH----HcCCCe
Confidence 4578999999999999999999997 6787644 2346676654443 1 7999998864 458999
Q ss_pred EEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-c--CCcccCceeHHhHHHHHHHhhcCCCCCc-eEEEe-cCcccHH
Q 026820 107 VAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-Q--EHYWLGAVHVKDVAKAQVLLFETSAASG-RYLCT-NGIYQFA 181 (232)
Q Consensus 107 ~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~-~~~~s~~ 181 (232)
+++||+.+||+.... .....++.++..+.++. . +++.++++|++|+|+++..++.++...+ .|+++ ++.+++.
T Consensus 204 ~ilRp~~vyG~~~~~--~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~ 281 (378)
T PLN00016 204 TSFRPQYIYGPGNNK--DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFD 281 (378)
T ss_pred EEEeceeEECCCCCC--chHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccccCCEEEecCCCccCHH
Confidence 999999999997543 23344566677777665 2 3467899999999999999998765444 68775 5679999
Q ss_pred HHHHHHHhhC
Q 026820 182 EFAEKVSKLF 191 (232)
Q Consensus 182 el~~~i~~~~ 191 (232)
|+++.+++.+
T Consensus 282 el~~~i~~~~ 291 (378)
T PLN00016 282 GMAKACAKAA 291 (378)
T ss_pred HHHHHHHHHh
Confidence 9999999987
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.8e-18 Score=135.81 Aligned_cols=152 Identities=14% Similarity=0.074 Sum_probs=113.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+++.. ...+....+.|+.++.+++++|++.|+++||++||.++ +. . +.
T Consensus 66 d~Vi~~~~~~-----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~-~~--~--------------~~----- 118 (317)
T CHL00194 66 TAIIDASTSR-----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNA-EQ--Y--------------PY----- 118 (317)
T ss_pred CEEEECCCCC-----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccc-cc--c--------------CC-----
Confidence 7899987642 23456688899999999999999999999999998632 10 0 00
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc--cCCcccCceeHHhHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT--QEHYWLGAVHVKDVAKAQ 158 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~ 158 (232)
++|..+|..+|+++. +.+++++++||+.+|+.. +..+....+.+.+.. .+++.++++|++|+|+++
T Consensus 119 -~~~~~~K~~~e~~l~----~~~l~~tilRp~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 186 (317)
T CHL00194 119 -IPLMKLKSDIEQKLK----KSGIPYTIFRLAGFFQGL-------ISQYAIPILEKQPIWITNESTPISYIDTQDAAKFC 186 (317)
T ss_pred -ChHHHHHHHHHHHHH----HcCCCeEEEeecHHhhhh-------hhhhhhhhccCCceEecCCCCccCccCHHHHHHHH
Confidence 368899999998864 458999999999887531 111222233344433 234678999999999999
Q ss_pred HHhhcCCCCCc-eEEEe-cCcccHHHHHHHHHhhC
Q 026820 159 VLLFETSAASG-RYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 159 ~~~~~~~~~~~-~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+.++..+...+ .|+++ ++.+|++|+++.+++.+
T Consensus 187 ~~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~ 221 (317)
T CHL00194 187 LKSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLS 221 (317)
T ss_pred HHHhcCccccCcEEEecCCCccCHHHHHHHHHHHh
Confidence 99998765545 68765 56799999999999998
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-18 Score=137.72 Aligned_cols=184 Identities=23% Similarity=0.084 Sum_probs=120.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|.|||+|+.++. ..++.+++.+||.||+.+++.|.....|.++|+||+++.-...........+|+++..... ...
T Consensus 89 D~I~H~gA~Vn~---v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~-~~~ 164 (382)
T COG3320 89 DLIIHNAALVNH---VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVG-QGL 164 (382)
T ss_pred ceEEecchhhcc---cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccccccc-Ccc
Confidence 799999999986 7889999999999999999999998888999999985532222222122233333322222 344
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCC---hhHHHHHHHHhCCCCccCCcccCceeHHhHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVN---ASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKA 157 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~ 157 (232)
.++|++||+.+|.+++++... |++++|+|||.|.|....+.++ .+.+++..++.-+..+......+++.++.++++
T Consensus 165 ~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~~~~~~p~~~v~~~ 243 (382)
T COG3320 165 AGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYSLDMLPVDHVARA 243 (382)
T ss_pred CCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcccchhhCccceeeEE
Confidence 579999999999999997655 9999999999999988755443 223333333332222211233455554444444
Q ss_pred HHHhhcC-----------CCC-CceEEE--ecCcccHHHHHHHHHh
Q 026820 158 QVLLFET-----------SAA-SGRYLC--TNGIYQFAEFAEKVSK 189 (232)
Q Consensus 158 ~~~~~~~-----------~~~-~~~~~~--~~~~~s~~el~~~i~~ 189 (232)
+...+.. +.. .+.|.+ -+..+...++.+.+.+
T Consensus 244 v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 244 VVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred eehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence 3332221 111 123432 2677999999998887
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-17 Score=136.79 Aligned_cols=152 Identities=14% Similarity=0.063 Sum_probs=115.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+||||++.... .....++.|+.++.+++++|++.|+++||++||. .+++ +.
T Consensus 138 D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~-~v~~-----------------p~----- 189 (390)
T PLN02657 138 DVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI-CVQK-----------------PL----- 189 (390)
T ss_pred cEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec-cccC-----------------cc-----
Confidence 789999885321 2345678899999999999999999999999997 3321 11
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCc--cc-CceeHHhHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHY--WL-GAVHVKDVAK 156 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~-~~i~v~D~a~ 156 (232)
..|..+|..+|+.+.. .+.+++++|+||+.+||.. ...+..+..++++. +|++ .+ ++||++|+|+
T Consensus 190 -~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~--------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~ 258 (390)
T PLN02657 190 -LEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSL--------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLAS 258 (390)
T ss_pred -hHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhccc--------HHHHHhhccCCceEEecCCcccccCceeHHHHHH
Confidence 3688999999998765 3569999999999999742 12344455666654 5653 23 5799999999
Q ss_pred HHHHhhcCCCCCc-eEEEec--CcccHHHHHHHHHhhC
Q 026820 157 AQVLLFETSAASG-RYLCTN--GIYQFAEFAEKVSKLF 191 (232)
Q Consensus 157 ~~~~~~~~~~~~~-~~~~~~--~~~s~~el~~~i~~~~ 191 (232)
+++.++..+...+ .|++++ +.+|++|+++.+.+.+
T Consensus 259 ~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~l 296 (390)
T PLN02657 259 FIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRIL 296 (390)
T ss_pred HHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHh
Confidence 9999987655444 687764 4799999999999998
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.4e-17 Score=153.02 Aligned_cols=183 Identities=20% Similarity=0.133 Sum_probs=128.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCC---------CCCccCCCCC
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP---------QGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~---------~~~~~~E~~~ 71 (232)
|+|||+|+..+. ..+...+...|+.|+.+++++|.+.++++|+|+||. .+|+..... ....+.|+.+
T Consensus 1063 d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~-~v~~~~~~~~~~~~~~~~~~~~~~e~~~ 1138 (1389)
T TIGR03443 1063 DVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSST-SALDTEYYVNLSDELVQAGGAGIPESDD 1138 (1389)
T ss_pred CEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCe-eecCcccccchhhhhhhccCCCCCcccc
Confidence 789999999875 455666777899999999999998888999999998 556532110 0112344433
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhC----CCCccCCcccC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQG----SKDTQEHYWLG 147 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 147 (232)
..+.. ....++|+.||+.+|+++..+.+ .|++++|+||+.|||+...+.. ....++..++++ +....+...++
T Consensus 1139 ~~~~~-~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~ 1215 (1389)
T TIGR03443 1139 LMGSS-KGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGAT-NTDDFLLRMLKGCIQLGLIPNINNTVN 1215 (1389)
T ss_pred ccccc-ccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCC-CchhHHHHHHHHHHHhCCcCCCCCccc
Confidence 22211 12235799999999999998754 5999999999999998765432 223333333332 22222335689
Q ss_pred ceeHHhHHHHHHHhhcCCCC--Cc-eEEEe-cCcccHHHHHHHHHhh
Q 026820 148 AVHVKDVAKAQVLLFETSAA--SG-RYLCT-NGIYQFAEFAEKVSKL 190 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~~~--~~-~~~~~-~~~~s~~el~~~i~~~ 190 (232)
|++|+|++++++.++.++.. .+ .|++. +..+++.++++.+.+.
T Consensus 1216 ~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443 1216 MVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred cccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh
Confidence 99999999999999876532 22 57665 4569999999999764
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.73 E-value=3e-17 Score=120.72 Aligned_cols=185 Identities=21% Similarity=0.222 Sum_probs=142.4
Q ss_pred eEEEeecCCCC-CCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 2 GVFHLASPNTL-DDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 2 ~Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
.|||+|+-... ..-...+.+++..|++.--|++..|.+.|++++++..|. .+|.+.. .-|++|+.....+. .+.
T Consensus 58 hVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclSt-CIfPdkt---~yPIdEtmvh~gpp-hps 132 (315)
T KOG1431|consen 58 HVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLST-CIFPDKT---SYPIDETMVHNGPP-HPS 132 (315)
T ss_pred eeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcce-eecCCCC---CCCCCHHHhccCCC-CCC
Confidence 68999998766 444556789999999999999999999999999988876 7787766 44588886554432 333
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC---CChhHHHHHHHHh----CC-CCc-cCC--cccCce
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY---VNASGAVLQRLLQ----GS-KDT-QEH--YWLGAV 149 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~---~~~~~~~~~~~~~----~~-~~~-~~~--~~~~~i 149 (232)
.-+|+.+|+++...-..|.++.|.+++.+-|+++|||.++-. ...+..+++++.. |. .+. ||. -.|.|+
T Consensus 133 N~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFi 212 (315)
T KOG1431|consen 133 NFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFI 212 (315)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHh
Confidence 358999999999888999999999999999999999987542 2344555555432 33 222 666 468999
Q ss_pred eHHhHHHHHHHhhcCCCCCc-eEEEecC--cccHHHHHHHHHhhC
Q 026820 150 HVKDVAKAQVLLFETSAASG-RYLCTNG--IYQFAEFAEKVSKLF 191 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~~~~-~~~~~~~--~~s~~el~~~i~~~~ 191 (232)
|++|+|+++++++++-..-. +.+..|+ .+|++|+++.+.+.+
T Consensus 213 ys~DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~ 257 (315)
T KOG1431|consen 213 YSDDLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAV 257 (315)
T ss_pred hHhHHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHh
Confidence 99999999999997754333 3444565 699999999999886
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.6e-16 Score=134.82 Aligned_cols=181 Identities=14% Similarity=0.140 Sum_probs=123.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc-CCCEEEEecccceeccCCCCCCCCccCCCCCC-------
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT------- 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~------- 72 (232)
|+|||+|+..++ ..++....+.|+.++.+++++|++. ++++|||+||. .+||.... .+.|...+
T Consensus 221 DiVIH~AA~v~f---~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTa-yVyG~~~G----~i~E~~y~~~~~i~~ 292 (605)
T PLN02503 221 DVIINSAANTTF---DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTA-YVNGQRQG----RIMEKPFRMGDCIAR 292 (605)
T ss_pred CEEEECcccccc---ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCc-eeecCCCC----eeeeeecCccccccc
Confidence 789999999886 5668899999999999999999887 57899999996 77876531 12222111
Q ss_pred ---------------Cc-------------------------------ccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 026820 73 ---------------DL-------------------------------DFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDV 106 (232)
Q Consensus 73 ---------------~~-------------------------------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 106 (232)
.+ .......|.|..||.++|+++.++ ..++++
T Consensus 293 ~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~--~~~LPv 370 (605)
T PLN02503 293 ELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSM--RGDIPV 370 (605)
T ss_pred ccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHHHh--cCCCCE
Confidence 00 001223478999999999999864 358999
Q ss_pred EEEcCCCeeCCCCCC------CCChhHHHHHHHHhCCCCc---cCCcccCceeHHhHHHHHHHhhcC-C---CCCc-eEE
Q 026820 107 VAIHPATSLGPFPQP------YVNASGAVLQRLLQGSKDT---QEHYWLGAVHVKDVAKAQVLLFET-S---AASG-RYL 172 (232)
Q Consensus 107 ~ilR~~~i~G~~~~~------~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~-~---~~~~-~~~ 172 (232)
+|+||+.|.+....+ +.......+....+|.... .++...|+|+||.++++++.++.. . ...+ +|+
T Consensus 371 ~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn 450 (605)
T PLN02503 371 VIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQ 450 (605)
T ss_pred EEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEE
Confidence 999999994422111 0011111122222332221 334678999999999999998432 1 1123 687
Q ss_pred Ee-c--CcccHHHHHHHHHhhC
Q 026820 173 CT-N--GIYQFAEFAEKVSKLF 191 (232)
Q Consensus 173 ~~-~--~~~s~~el~~~i~~~~ 191 (232)
++ + +++++.++.+.+.+.+
T Consensus 451 ~ts~~~nP~t~~~~~~~~~~~~ 472 (605)
T PLN02503 451 IASSVVNPLVFQDLARLLYEHY 472 (605)
T ss_pred eCCCCCCCeEHHHHHHHHHHHH
Confidence 74 5 6799999999998765
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.70 E-value=4e-16 Score=137.58 Aligned_cols=171 Identities=15% Similarity=0.155 Sum_probs=120.7
Q ss_pred CeEEEeecCCCC---CCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCC-C--CCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTL---DDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPN-W--PQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~-~--~~~~~~~E~~~~~~ 74 (232)
|+|||||+.++. ..+...+.+.+++|+.++.+|+++|++.|++ +|++||. .+|+... . ....+++|++++.+
T Consensus 430 d~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~-~v~~~~~~~~~~~~~p~~E~~~~~~ 507 (668)
T PLN02260 430 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATG-CIFEYDAKHPEGSGIGFKEEDKPNF 507 (668)
T ss_pred CEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEccc-ceecCCcccccccCCCCCcCCCCCC
Confidence 799999998753 2344578899999999999999999999985 6677775 5554311 0 11235788775544
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHh
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKD 153 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D 153 (232)
.. +.|+.+|..+|+++..+. +..++|+.++||...... ..++..+++..... .+ .+..+++|
T Consensus 508 ~~-----~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~~~----~nfv~~~~~~~~~~~vp---~~~~~~~~ 570 (668)
T PLN02260 508 TG-----SFYSKTKAMVEELLREYD-----NVCTLRVRMPISSDLSNP----RNFITKISRYNKVVNIP---NSMTVLDE 570 (668)
T ss_pred CC-----ChhhHHHHHHHHHHHhhh-----hheEEEEEEecccCCCCc----cHHHHHHhccceeeccC---CCceehhh
Confidence 32 689999999999987763 467888888887542221 13344444444322 33 35778899
Q ss_pred HHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 154 VAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 154 ~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
++.+++.++.. ...|.||++ ++.+|+.|+++.+.+.+
T Consensus 571 ~~~~~~~l~~~-~~~giyni~~~~~~s~~e~a~~i~~~~ 608 (668)
T PLN02260 571 LLPISIEMAKR-NLRGIWNFTNPGVVSHNEILEMYKDYI 608 (668)
T ss_pred HHHHHHHHHHh-CCCceEEecCCCcCcHHHHHHHHHHhc
Confidence 99988888864 335788776 56699999999998865
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.1e-16 Score=119.20 Aligned_cols=186 Identities=17% Similarity=0.104 Sum_probs=153.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCC--CEEEEecccceeccCCCCCCCCccCCCCCCCccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGV--RRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCK 78 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~ 78 (232)
|-|+|+|+..+...+.+.|....+++..||.+|+++.+..|. -+|.+.||+ ..||... ..|.+|.+|..|.
T Consensus 80 dEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStS-E~fG~v~---~~pq~E~TPFyPr--- 152 (345)
T COG1089 80 DEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTS-ELYGLVQ---EIPQKETTPFYPR--- 152 (345)
T ss_pred hhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccH-HhhcCcc---cCccccCCCCCCC---
Confidence 568999999988777788999999999999999999998854 389999986 9999776 5668999998887
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC--ChhHHHHHHHHhCCCCc--cCC--cccCceeHH
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV--NASGAVLQRLLQGSKDT--QEH--YWLGAVHVK 152 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~--~~~--~~~~~i~v~ 152 (232)
|||+.+|..+-.+...|.+.+|+-.+.-++++-=+|.....+ +.+...+.++..|..-. .|+ ..|||-|+.
T Consensus 153 ---SPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~ 229 (345)
T COG1089 153 ---SPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAK 229 (345)
T ss_pred ---CHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchH
Confidence 699999999999999999999999988887777666544322 34455566666676654 666 789999999
Q ss_pred hHHHHHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhCCCCCCc
Q 026820 153 DVAKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 153 D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~p~~~~~ 197 (232)
|-+++++.++++..+....+++|+..|.+|+++...+.. ++.+.
T Consensus 230 DYVe~mwlmLQq~~PddyViATg~t~sVrefv~~Af~~~-g~~l~ 273 (345)
T COG1089 230 DYVEAMWLMLQQEEPDDYVIATGETHSVREFVELAFEMV-GIDLE 273 (345)
T ss_pred HHHHHHHHHHccCCCCceEEecCceeeHHHHHHHHHHHc-CceEE
Confidence 999999999998876555577899999999999988887 54443
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.8e-15 Score=131.72 Aligned_cols=136 Identities=24% Similarity=0.170 Sum_probs=102.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+.... ..+.|+.++.+++++|++.+++++|++||..
T Consensus 63 D~VVHlAa~~~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~---------------------------- 105 (854)
T PRK05865 63 DVVAHCAWVRGR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH---------------------------- 105 (854)
T ss_pred CEEEECCCcccc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH----------------------------
Confidence 799999986431 5689999999999999999999999999841
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCC--cccCceeHHhHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEH--YWLGAVHVKDVAKAQ 158 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~D~a~~~ 158 (232)
|..+|+++. +++++++++||+++||++. ..++..+........++ ..++|+|++|+|+++
T Consensus 106 -------K~aaE~ll~----~~gl~~vILRp~~VYGP~~-------~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai 167 (854)
T PRK05865 106 -------QPRVEQMLA----DCGLEWVAVRCALIFGRNV-------DNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLL 167 (854)
T ss_pred -------HHHHHHHHH----HcCCCEEEEEeceEeCCCh-------HHHHHHHhcCceeccCCCCceEeeeeHHHHHHHH
Confidence 677888764 4589999999999999862 12233332211112333 456999999999999
Q ss_pred HHhhcCCC-CCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 159 VLLFETSA-ASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 159 ~~~~~~~~-~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
..++.... ..+.||++ ++.+|+.|+++.+.+..
T Consensus 168 ~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~~~ 202 (854)
T PRK05865 168 VRALLDTVIDSGPVNLAAPGELTFRRIAAALGRPM 202 (854)
T ss_pred HHHHhCCCcCCCeEEEECCCcccHHHHHHHHhhhh
Confidence 99986543 34578665 67799999999998743
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-14 Score=107.37 Aligned_cols=190 Identities=17% Similarity=0.185 Sum_probs=137.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|.+||+.+..+.. .+..-....++|+.|..|+++.|++.+. ++...|++++ +|.... ..+.+.-+. .++
T Consensus 112 dWL~HfSALLSAv-GE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGA-FGPtSP--RNPTPdltI------QRP 180 (366)
T KOG2774|consen 112 DWLVHFSALLSAV-GETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGA-FGPTSP--RNPTPDLTI------QRP 180 (366)
T ss_pred ceeeeHHHHHHHh-cccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccc-cCCCCC--CCCCCCeee------ecC
Confidence 4577877765541 2333456788999999999999999987 4555687755 443221 112222222 344
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCC---hhHHHHHHHHhCCCCc--cCCcccCceeHHhHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVN---ASGAVLQRLLQGSKDT--QEHYWLGAVHVKDVA 155 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a 155 (232)
+..|+.||..+|.+-+.+..+.|+++.++|.+.+......++.. .+..+-.++.+|+.-. -+|.+..++|.+|+.
T Consensus 181 RTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~ 260 (366)
T KOG2774|consen 181 RTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCM 260 (366)
T ss_pred ceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHH
Confidence 56999999999999999988899999999999998754333211 2333444555666555 677888999999999
Q ss_pred HHHHHhhcCCCCCc---eEEEecCcccHHHHHHHHHhhCCCCCCcccee
Q 026820 156 KAQVLLFETSAASG---RYLCTNGIYQFAEFAEKVSKLFPEYPIHRFVC 201 (232)
Q Consensus 156 ~~~~~~~~~~~~~~---~~~~~~~~~s~~el~~~i~~~~p~~~~~~~~~ 201 (232)
++++..+..+...- .||+++-..+-.|+.+.+.+.+|++.+.+.+.
T Consensus 261 ~~~~~~~~a~~~~lkrr~ynvt~~sftpee~~~~~~~~~p~~~i~y~~~ 309 (366)
T KOG2774|consen 261 ASVIQLLAADSQSLKRRTYNVTGFSFTPEEIADAIRRVMPGFEIDYDIC 309 (366)
T ss_pred HHHHHHHhCCHHHhhhheeeeceeccCHHHHHHHHHhhCCCceeecccc
Confidence 99999887654322 59999999999999999999999887765543
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.57 E-value=8.2e-14 Score=106.18 Aligned_cols=156 Identities=19% Similarity=0.116 Sum_probs=118.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
.+|||+.|..- +.....+.++|+.+.+.|++.|++.|+.+||++|+.++ + +. .+
T Consensus 132 NVVINLIGrd~----eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga-----n------v~-----s~------ 185 (391)
T KOG2865|consen 132 NVVINLIGRDY----ETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA-----N------VK-----SP------ 185 (391)
T ss_pred cEEEEeecccc----ccCCcccccccchHHHHHHHHHHhhChhheeehhhccc-----c------cc-----Ch------
Confidence 37999988743 33456788999999999999999999999999998743 1 11 11
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-c--CC-cccCceeHHhHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-Q--EH-YWLGAVHVKDVAK 156 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~-~~~~~i~v~D~a~ 156 (232)
+-|-++|.++|..++.. =-..+|+||+.|||..+. .+..+...+.+-+.+. + |. ..-..+||-|+|.
T Consensus 186 -Sr~LrsK~~gE~aVrda----fPeAtIirPa~iyG~eDr----fln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa 256 (391)
T KOG2865|consen 186 -SRMLRSKAAGEEAVRDA----FPEATIIRPADIYGTEDR----FLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAA 256 (391)
T ss_pred -HHHHHhhhhhHHHHHhh----CCcceeechhhhcccchh----HHHHHHHHHHhcCceeeecCCcceeeccEEEehHHH
Confidence 47999999999998764 345899999999998653 4443333333333333 2 32 4457899999999
Q ss_pred HHHHhhcCCCCCc-eE-EEecCcccHHHHHHHHHhhC
Q 026820 157 AQVLLFETSAASG-RY-LCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 157 ~~~~~~~~~~~~~-~~-~~~~~~~s~~el~~~i~~~~ 191 (232)
+|..++..+...| .| .++++.+++.||++.+-+..
T Consensus 257 ~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~~~ 293 (391)
T KOG2865|consen 257 AIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMA 293 (391)
T ss_pred HHHHhccCccccCceeeecCCchhhHHHHHHHHHHHH
Confidence 9999999998777 68 67778899999999886654
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.4e-13 Score=105.14 Aligned_cols=164 Identities=15% Similarity=0.124 Sum_probs=110.1
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||....... .......++.|+.++.++++++ ++.+.+++|++||.+...+.+
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------- 143 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYP-------------- 143 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCC--------------
Confidence 789999998754211 2234567889999999999997 445667999999974321110
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCe---eCCCCCCCC------ChhHHHHHHHHhCCCCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATS---LGPFPQPYV------NASGAVLQRLLQGSKDT 140 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i---~G~~~~~~~------~~~~~~~~~~~~~~~~~ 140 (232)
+ .+.|+.+|...|.+++.+.++ .+++++++||+.+ ||+...... ......+.+.+..+.
T Consensus 144 -~------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 214 (276)
T PRK06482 144 -G------FSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGS-- 214 (276)
T ss_pred -C------CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhcc--
Confidence 1 158999999999999888765 5999999999988 655432110 011111222222221
Q ss_pred cCCcccCceeHHhHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
..-+.+++|++++++.++........|+++ ++..+..|+++.+.+.+
T Consensus 215 ----~~~~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 262 (276)
T PRK06482 215 ----FAIPGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAAL 262 (276)
T ss_pred ----CCCCCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHH
Confidence 112467999999999999766555567665 55678888887776655
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.7e-13 Score=111.61 Aligned_cols=193 Identities=20% Similarity=0.192 Sum_probs=126.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc-CCCEEEEecccceeccCCCCCCCCccCCCCCCC------
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD------ 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~------ 73 (232)
|+|||+||.+.+ .+..+.....|..||+++++.|++. ..+-++++|+..+- .........++.+.....
T Consensus 108 ~ivih~AAtvrF---de~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n-~~~~~i~E~~y~~~~~~~~~~~i~ 183 (467)
T KOG1221|consen 108 NIVIHSAATVRF---DEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN-CNVGHIEEKPYPMPETCNPEKILK 183 (467)
T ss_pred CEEEEeeeeecc---chhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee-cccccccccccCccccCCHHHHHh
Confidence 689999999998 7778889999999999999999987 78899999986332 211111111121111000
Q ss_pred --------------cccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChh------HHHHHHH
Q 026820 74 --------------LDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNAS------GAVLQRL 133 (232)
Q Consensus 74 --------------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~------~~~~~~~ 133 (232)
+.......|.|..+|..+|+++.+. ..+++++|+||+.|......+-.+.+ ...+...
T Consensus 184 ~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~--~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~ 261 (467)
T KOG1221|consen 184 LDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE--AENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGY 261 (467)
T ss_pred hhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh--ccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEe
Confidence 0011234578999999999999875 56899999999999886654422211 1111112
Q ss_pred HhCCCCc---cCCcccCceeHHhHHHHHHHhhc----CCCC--CceEEEe-c--CcccHHHHHHHHHhhCCCCCCccc
Q 026820 134 LQGSKDT---QEHYWLGAVHVKDVAKAQVLLFE----TSAA--SGRYLCT-N--GIYQFAEFAEKVSKLFPEYPIHRF 199 (232)
Q Consensus 134 ~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~----~~~~--~~~~~~~-~--~~~s~~el~~~i~~~~p~~~~~~~ 199 (232)
.+|..-. .++...|+|.+|.++++++.+.- +... ..+|+++ + .++++.++.+...+.+...++...
T Consensus 262 gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~~~Pl~~~ 339 (467)
T KOG1221|consen 262 GKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFEKIPLEKM 339 (467)
T ss_pred ccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcccCCcccc
Confidence 2222111 23367799999999999997662 1211 2267664 2 459999999999888744444433
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.2e-13 Score=115.23 Aligned_cols=141 Identities=20% Similarity=0.201 Sum_probs=99.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+.... .....|+.++.|++++|++.|+ ++||+||. +|.+.
T Consensus 62 D~VIHLAa~~~~--------~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~---~G~~~--------------------- 108 (699)
T PRK12320 62 DAVIHLAPVDTS--------APGGVGITGLAHVANAAARAGA-RLLFVSQA---AGRPE--------------------- 108 (699)
T ss_pred CEEEEcCccCcc--------chhhHHHHHHHHHHHHHHHcCC-eEEEEECC---CCCCc---------------------
Confidence 789999987421 1225899999999999999997 79999975 23211
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC-ChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV-NASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~ 159 (232)
.|. .+|.++. .++++++|+|++++||+...... +.+..++.....++ ...++|++|++++++
T Consensus 109 --~~~----~aE~ll~----~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~-------pI~vIyVdDvv~alv 171 (699)
T PRK12320 109 --LYR----QAETLVS----TGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSAR-------PIRVLHLDDLVRFLV 171 (699)
T ss_pred --ccc----HHHHHHH----hcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCC-------ceEEEEHHHHHHHHH
Confidence 121 3566643 34799999999999998654321 22333333333333 335699999999999
Q ss_pred HhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 160 LLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 160 ~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
.+++... .|.||++ ++.+|+.|+++.+....|
T Consensus 172 ~al~~~~-~GiyNIG~~~~~Si~el~~~i~~~~p 204 (699)
T PRK12320 172 LALNTDR-NGVVDLATPDTTNVVTAWRLLRSVDP 204 (699)
T ss_pred HHHhCCC-CCEEEEeCCCeeEHHHHHHHHHHhCC
Confidence 9987643 4678665 677999999999988764
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=9.9e-13 Score=97.14 Aligned_cols=157 Identities=16% Similarity=0.127 Sum_probs=113.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHH
Q 026820 19 EKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAW 96 (232)
Q Consensus 19 ~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 96 (232)
..+....-+..|+.|+++...+ -.+.+|.+|.. ++|-.+. ...++|+.+...-+ .. ++...|....
T Consensus 97 qkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gv-a~y~pS~---s~eY~e~~~~qgfd------~~--srL~l~WE~a 164 (315)
T KOG3019|consen 97 QKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGV-AVYVPSE---SQEYSEKIVHQGFD------IL--SRLCLEWEGA 164 (315)
T ss_pred HHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEee-EEecccc---ccccccccccCChH------HH--HHHHHHHHHH
Confidence 3455555566788999999887 34679999976 6666554 34478887655542 33 3333333332
Q ss_pred HHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHH--HHHHHhCCCCccCCcccCceeHHhHHHHHHHhhcCCCCCceEEE-
Q 026820 97 EFAEKNGTDVVAIHPATSLGPFPQPYVNASGAV--LQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLC- 173 (232)
Q Consensus 97 ~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~- 173 (232)
........+.+++|.|.|.|.+.. .+..| .-++..|+|+..|++.++|||++|++..+..+++++...|..|.
T Consensus 165 A~~~~~~~r~~~iR~GvVlG~gGG----a~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~GViNgv 240 (315)
T KOG3019|consen 165 ALKANKDVRVALIRIGVVLGKGGG----ALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSVKGVINGV 240 (315)
T ss_pred hhccCcceeEEEEEEeEEEecCCc----chhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCceeccc
Confidence 222233689999999999998643 33333 33566788887888999999999999999999999988887654
Q ss_pred ecCcccHHHHHHHHHhhC
Q 026820 174 TNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 174 ~~~~~s~~el~~~i~~~~ 191 (232)
.+++.+..|+.+.+.+.+
T Consensus 241 AP~~~~n~Ef~q~lg~aL 258 (315)
T KOG3019|consen 241 APNPVRNGEFCQQLGSAL 258 (315)
T ss_pred CCCccchHHHHHHHHHHh
Confidence 578899999999999988
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.9e-12 Score=101.15 Aligned_cols=131 Identities=16% Similarity=0.211 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-cCCcE
Q 026820 28 QGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK-NGTDV 106 (232)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~ 106 (232)
....+++++|++.|+++||++||.+...+ . + .+...|+++ ++ .++++
T Consensus 83 ~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~--~--------------~------------~~~~~~~~l----~~~~gi~~ 130 (285)
T TIGR03649 83 PPMIKFIDFARSKGVRRFVLLSASIIEKG--G--------------P------------AMGQVHAHL----DSLGGVEY 130 (285)
T ss_pred HHHHHHHHHHHHcCCCEEEEeeccccCCC--C--------------c------------hHHHHHHHH----HhccCCCE
Confidence 45678999999999999999998633111 0 0 112234433 33 48999
Q ss_pred EEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc--cCCcccCceeHHhHHHHHHHhhcCCCCCc-eEEE-ecCcccHHH
Q 026820 107 VAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT--QEHYWLGAVHVKDVAKAQVLLFETSAASG-RYLC-TNGIYQFAE 182 (232)
Q Consensus 107 ~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~-~~~~~s~~e 182 (232)
+++||+.+++..... . ....+..++.+. .+++.++|+|++|+|++++.++..+...+ .|++ +++.+|+.|
T Consensus 131 tilRp~~f~~~~~~~---~---~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~e 204 (285)
T TIGR03649 131 TVLRPTWFMENFSEE---F---HVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVLGPELLTYDD 204 (285)
T ss_pred EEEeccHHhhhhccc---c---cccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEeeCCccCCHHH
Confidence 999999888543111 0 111122223222 45678899999999999999998765444 5755 457899999
Q ss_pred HHHHHHhhCCCCCCc
Q 026820 183 FAEKVSKLFPEYPIH 197 (232)
Q Consensus 183 l~~~i~~~~p~~~~~ 197 (232)
+++.+.+.+ +.+++
T Consensus 205 ia~~l~~~~-g~~v~ 218 (285)
T TIGR03649 205 VAEILSRVL-GRKIT 218 (285)
T ss_pred HHHHHHHHh-CCceE
Confidence 999999998 54444
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.1e-12 Score=97.89 Aligned_cols=158 Identities=18% Similarity=0.164 Sum_probs=102.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||++|.... ..+...+..|..++.++++++.+.+++++|++||. .+|+.... .+..+... .. ..
T Consensus 87 d~vi~~~g~~~~----~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~-~v~g~~~~---~~~~~~~~--~~---~~ 153 (251)
T PLN00141 87 DAVICATGFRRS----FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI-LVNGAAMG---QILNPAYI--FL---NL 153 (251)
T ss_pred CEEEECCCCCcC----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc-cccCCCcc---cccCcchh--HH---HH
Confidence 789999886431 12233457889999999999999999999999998 55664321 11111100 00 00
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCC-cccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEH-YWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~ 159 (232)
...|..+|..+|+++. +.+++++++||+++++....... . .. .++ ....+++.+|+|++++
T Consensus 154 ~~~~~~~k~~~e~~l~----~~gi~~~iirpg~~~~~~~~~~~--~-------~~-----~~~~~~~~~i~~~dvA~~~~ 215 (251)
T PLN00141 154 FGLTLVAKLQAEKYIR----KSGINYTIVRPGGLTNDPPTGNI--V-------ME-----PEDTLYEGSISRDQVAEVAV 215 (251)
T ss_pred HHHHHHHHHHHHHHHH----hcCCcEEEEECCCccCCCCCceE--E-------EC-----CCCccccCcccHHHHHHHHH
Confidence 1234567888887754 45899999999999976432110 0 00 011 1235799999999999
Q ss_pred HhhcCCCCCc-eE-EEe--cC-cccHHHHHHHHHh
Q 026820 160 LLFETSAASG-RY-LCT--NG-IYQFAEFAEKVSK 189 (232)
Q Consensus 160 ~~~~~~~~~~-~~-~~~--~~-~~s~~el~~~i~~ 189 (232)
.++..+...+ .+ ++. +. ..++.+|...+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 216 EALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred HHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence 9998876544 44 443 23 3789999887764
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.5e-11 Score=96.03 Aligned_cols=163 Identities=16% Similarity=0.111 Sum_probs=109.6
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+.....+++|+.++.++++++ ++.+.+++|++||.+...+.+.
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~------------- 145 (275)
T PRK08263 79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPM------------- 145 (275)
T ss_pred CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCC-------------
Confidence 78999999865411 22345677899999988888775 4556679999999744322211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC------ChhHHHHHHHHhCCCCccCC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV------NASGAVLQRLLQGSKDTQEH 143 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 143 (232)
.+.|+.+|...|.+...++.+ .|++++++||+.+..+...... .........+... .
T Consensus 146 --------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~-- 211 (275)
T PRK08263 146 --------SGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ----W-- 211 (275)
T ss_pred --------ccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH----H--
Confidence 147999999999998887764 5899999999988765432110 0011111111000 0
Q ss_pred cccCc-eeHHhHHHHHHHhhcCCCCCceEEE-ec-CcccHHHHHHHHHhh
Q 026820 144 YWLGA-VHVKDVAKAQVLLFETSAASGRYLC-TN-GIYQFAEFAEKVSKL 190 (232)
Q Consensus 144 ~~~~~-i~v~D~a~~~~~~~~~~~~~~~~~~-~~-~~~s~~el~~~i~~~ 190 (232)
....+ ++++|++++++.+++.+...+.|+. ++ ..+++.++.+.+.+.
T Consensus 212 ~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (275)
T PRK08263 212 SERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATW 261 (275)
T ss_pred HhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence 12244 8899999999999988877776644 33 568888888887764
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.3e-11 Score=96.84 Aligned_cols=150 Identities=19% Similarity=0.168 Sum_probs=99.0
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHH----HHHHHHHH-HHcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQG----TLNVLEAA-KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~----~~~l~~~~-~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..++.|+.+ ++++++++ ++.+.+++|++||....++.+.
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~------------ 153 (262)
T PRK13394 86 DILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPL------------ 153 (262)
T ss_pred CEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCC------------
Confidence 78999999865411 122245667799998 66777777 6667789999999644222111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCCh--------hHHHHHHHHhCCCCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNA--------SGAVLQRLLQGSKDT 140 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~--------~~~~~~~~~~~~~~~ 140 (232)
.+.|+.+|...+.+++.++++ .+++++++||+.++++........ ......+++.+
T Consensus 154 ---------~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 220 (262)
T PRK13394 154 ---------KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLG---- 220 (262)
T ss_pred ---------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhc----
Confidence 147999999999998888765 489999999999998753221100 01122222222
Q ss_pred cCCcccCceeHHhHHHHHHHhhcCCCC--Cce-EEEecC
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFETSAA--SGR-YLCTNG 176 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~~ 176 (232)
+...+++++++|++++++.++..... .|. |+++++
T Consensus 221 -~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g 258 (262)
T PRK13394 221 -KTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG 258 (262)
T ss_pred -CCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCc
Confidence 12346899999999999999875432 354 566543
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=6.8e-11 Score=91.79 Aligned_cols=145 Identities=17% Similarity=0.139 Sum_probs=98.8
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ......+.+..|+.+..++++.+ ++.+.+++|++||.+..++...
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~------------- 152 (249)
T PRK12825 86 DILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPG------------- 152 (249)
T ss_pred CEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCC-------------
Confidence 78999999755422 12234667889999999999887 4557789999999755332111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.++..++++ .+++++++||+.++|+...... ....... .... ....++
T Consensus 153 --------~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~--~~~~~~~---~~~~----~~~~~~ 215 (249)
T PRK12825 153 --------RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATI--EEAREAK---DAET----PLGRSG 215 (249)
T ss_pred --------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccccc--chhHHhh---hccC----CCCCCc
Confidence 147999999999998887664 5899999999999998654321 1111111 0001 122389
Q ss_pred eHHhHHHHHHHhhcCCC--CCc-eEEEec
Q 026820 150 HVKDVAKAQVLLFETSA--ASG-RYLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 175 (232)
+.+|+++++..++.... ..| .|++++
T Consensus 216 ~~~dva~~~~~~~~~~~~~~~g~~~~i~~ 244 (249)
T PRK12825 216 TPEDIARAVAFLCSDASDYITGQVIEVTG 244 (249)
T ss_pred CHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence 99999999999996643 345 455553
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.6e-11 Score=93.08 Aligned_cols=153 Identities=14% Similarity=0.079 Sum_probs=98.1
Q ss_pred CeEEEeecCCCCCCC-CC---chhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDP-KD---PEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~-~~---~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||....... .. .....+++|+.++.++++++. +.+.+++|++||.++..+.+.
T Consensus 80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~------------- 146 (277)
T PRK06180 80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPG------------- 146 (277)
T ss_pred CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCC-------------
Confidence 789999998654111 11 224568999999999999853 345568999999754332111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC----ChhHHH---HHHHHhCCCCccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV----NASGAV---LQRLLQGSKDTQE 142 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~----~~~~~~---~~~~~~~~~~~~~ 142 (232)
. ..|+.+|...|.+++.++.+ .|++++++||+.+.++...... .....+ ........ ..
T Consensus 147 --~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 215 (277)
T PRK06180 147 --I------GYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAR---EA 215 (277)
T ss_pred --c------chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHH---Hh
Confidence 1 48999999999998887754 4899999999999765422111 111111 11110000 00
Q ss_pred CcccCceeHHhHHHHHHHhhcCCCCCceEEEecCc
Q 026820 143 HYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGI 177 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~ 177 (232)
.....+..++|+++++..++..+....+|..+.+.
T Consensus 216 ~~~~~~~~~~dva~~~~~~l~~~~~~~~~~~g~~~ 250 (277)
T PRK06180 216 KSGKQPGDPAKAAQAILAAVESDEPPLHLLLGSDA 250 (277)
T ss_pred hccCCCCCHHHHHHHHHHHHcCCCCCeeEeccHHH
Confidence 01224567999999999999877655566555444
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.31 E-value=9.2e-11 Score=91.56 Aligned_cols=147 Identities=18% Similarity=0.153 Sum_probs=96.6
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+|+....... ....+..+..|+.++..+++++ ++.+.+++|++||.+.+.+.+.
T Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~------------- 146 (255)
T TIGR01963 80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPF------------- 146 (255)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCC-------------
Confidence 789999998654111 1123456778999988888776 4567789999998744322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCC----------
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKD---------- 139 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~---------- 139 (232)
...|+.+|...|.+++.++.+ .+++++++||+.++++.... .+.........
T Consensus 147 --------~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 211 (255)
T TIGR01963 147 --------KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEK-------QIADQAKTRGIPEEQVIREVM 211 (255)
T ss_pred --------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHH-------HHHhhhcccCCCchHHHHHHH
Confidence 137999999999998877654 38999999999998874211 01111000000
Q ss_pred ccCCcccCceeHHhHHHHHHHhhcCCC--CCc-eEEEec
Q 026820 140 TQEHYWLGAVHVKDVAKAQVLLFETSA--ASG-RYLCTN 175 (232)
Q Consensus 140 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 175 (232)
..+...+++++++|+|++++.++.... ..| .|++++
T Consensus 212 ~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~ 250 (255)
T TIGR01963 212 LPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDG 250 (255)
T ss_pred HccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcC
Confidence 012245689999999999999997642 234 467654
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.5e-10 Score=89.48 Aligned_cols=149 Identities=12% Similarity=0.037 Sum_probs=95.5
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||........ ......+..|+.++.++++++. +.+..++|++||... +....
T Consensus 89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~-~~~~~------------- 154 (274)
T PRK07775 89 EVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVA-LRQRP------------- 154 (274)
T ss_pred CEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHh-cCCCC-------------
Confidence 7899999986541111 2234567899999999998865 334458999999733 22110
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCC-CCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPF-PQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
. .+.|+.+|...|.+++.++++. |++++++|||.+.++. ..........++....... +.....+
T Consensus 155 -~------~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 223 (274)
T PRK07775 155 -H------MGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWG----QARHDYF 223 (274)
T ss_pred -C------cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhc----ccccccc
Confidence 0 1479999999999999887654 8999999999875442 1111111122222211110 1124569
Q ss_pred eeHHhHHHHHHHhhcCCCCCceEEEe
Q 026820 149 VHVKDVAKAQVLLFETSAASGRYLCT 174 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~~~~~~~~ 174 (232)
+|++|++++++.+++++.....|++.
T Consensus 224 ~~~~dva~a~~~~~~~~~~~~~~~~~ 249 (274)
T PRK07775 224 LRASDLARAITFVAETPRGAHVVNME 249 (274)
T ss_pred cCHHHHHHHHHHHhcCCCCCCeeEEe
Confidence 99999999999999876433355554
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.8e-10 Score=89.11 Aligned_cols=162 Identities=17% Similarity=0.047 Sum_probs=107.0
Q ss_pred CeEEEeecCCCCCC-CCCch---hhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD-PKDPE---KELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~-~~~~~---~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||++|...... ...++ ......|+.++.++++++. +.+..++|++||.... ....
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-~~~~------------- 144 (257)
T PRK07074 79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGM-AALG------------- 144 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc-CCCC-------------
Confidence 79999999865411 11122 3445789999988888873 3455689999986321 1000
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
. ..|+.+|...|.+++.++++. ++++.++||+.+.++...........+....... ...++++
T Consensus 145 --~------~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 210 (257)
T PRK07074 145 --H------PAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW------YPLQDFA 210 (257)
T ss_pred --C------cccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc------CCCCCCC
Confidence 0 269999999999999988654 7999999999998865322111112222222111 1235799
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEe-cCcccHHHHHHHHHhh
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCT-NGIYQFAEFAEKVSKL 190 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~-~~~~s~~el~~~i~~~ 190 (232)
+++|++++++.++... ...|. ++++ |...+.+|+++.+.++
T Consensus 211 ~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~ 255 (257)
T PRK07074 211 TPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTLE 255 (257)
T ss_pred CHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhccc
Confidence 9999999999999653 33464 4555 4557899999987653
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.5e-10 Score=91.87 Aligned_cols=149 Identities=19% Similarity=0.057 Sum_probs=98.5
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||........ ....+.+..|+.++.++++++ ++.+..++|++||.+..++...
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~------------- 149 (280)
T PRK06914 83 DLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPG------------- 149 (280)
T ss_pred eEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCC-------------
Confidence 7899999986541111 233566789999998888885 4456679999999755444221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCeeCCCCCCCC----------ChhHHHHHHHHhCCCC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAE---KNGTDVVAIHPATSLGPFPQPYV----------NASGAVLQRLLQGSKD 139 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~----------~~~~~~~~~~~~~~~~ 139 (232)
...|+.+|...|.+++.++. ..+++++++|||.+.++...... ......+..+...
T Consensus 150 --------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 218 (280)
T PRK06914 150 --------LSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH--- 218 (280)
T ss_pred --------CchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHH---
Confidence 14899999999999888763 45999999999999876322100 0111111111110
Q ss_pred ccCCcccCceeHHhHHHHHHHhhcCCCCCceEEEe
Q 026820 140 TQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCT 174 (232)
Q Consensus 140 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 174 (232)
.......+++++|+|++++.++.++.....|+++
T Consensus 219 -~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~ 252 (280)
T PRK06914 219 -INSGSDTFGNPIDVANLIVEIAESKRPKLRYPIG 252 (280)
T ss_pred -HhhhhhccCCHHHHHHHHHHHHcCCCCCcccccC
Confidence 0112335789999999999999887665556665
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.26 E-value=4e-11 Score=89.07 Aligned_cols=122 Identities=29% Similarity=0.310 Sum_probs=85.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+++.... +...+++++++|++.|++++|++||. .+|..... ...... .+..
T Consensus 62 d~vi~~~~~~~~-------------~~~~~~~~~~a~~~~~~~~~v~~s~~-~~~~~~~~----~~~~~~--~~~~---- 117 (183)
T PF13460_consen 62 DAVIHAAGPPPK-------------DVDAAKNIIEAAKKAGVKRVVYLSSA-GVYRDPPG----LFSDED--KPIF---- 117 (183)
T ss_dssp SEEEECCHSTTT-------------HHHHHHHHHHHHHHTTSSEEEEEEET-TGTTTCTS----EEEGGT--CGGG----
T ss_pred chhhhhhhhhcc-------------cccccccccccccccccccceeeecc-ccCCCCCc----cccccc--ccch----
Confidence 789999977431 28889999999999999999999997 44553321 111111 1111
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVL 160 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 160 (232)
..|...|..+|+.+. +.+++++++||+.+||+.... ...... .+....++|+.+|+|++++.
T Consensus 118 -~~~~~~~~~~e~~~~----~~~~~~~ivrp~~~~~~~~~~-~~~~~~------------~~~~~~~~i~~~DvA~~~~~ 179 (183)
T PF13460_consen 118 -PEYARDKREAEEALR----ESGLNWTIVRPGWIYGNPSRS-YRLIKE------------GGPQGVNFISREDVAKAIVE 179 (183)
T ss_dssp -HHHHHHHHHHHHHHH----HSTSEEEEEEESEEEBTTSSS-EEEESS------------TSTTSHCEEEHHHHHHHHHH
T ss_pred -hhhHHHHHHHHHHHH----hcCCCEEEEECcEeEeCCCcc-eeEEec------------cCCCCcCcCCHHHHHHHHHH
Confidence 478899999988863 459999999999999986432 111100 22345599999999999999
Q ss_pred hhcC
Q 026820 161 LFET 164 (232)
Q Consensus 161 ~~~~ 164 (232)
++++
T Consensus 180 ~l~~ 183 (183)
T PF13460_consen 180 ALEN 183 (183)
T ss_dssp HHH-
T ss_pred HhCC
Confidence 8753
|
... |
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2e-10 Score=89.84 Aligned_cols=150 Identities=19% Similarity=0.193 Sum_probs=95.0
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHH----HHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTL----NVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~----~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||........ ...+..++.|+.++. .++.++++.+.+++|++||....++...
T Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~------------- 149 (258)
T PRK12429 83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAG------------- 149 (258)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC-------------
Confidence 7899999976542111 122456678888844 4445555667789999999755443221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCC--------hhHHHHHHHHhCCCCcc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVN--------ASGAVLQRLLQGSKDTQ 141 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~--------~~~~~~~~~~~~~~~~~ 141 (232)
.+.|+.+|...+.+.+.++.+ .++.++++||+.++++....... ............
T Consensus 150 --------~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 216 (258)
T PRK12429 150 --------KAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLP----- 216 (258)
T ss_pred --------cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhc-----
Confidence 148999999999888877654 37999999999999875432100 000011111111
Q ss_pred CCcccCceeHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 142 EHYWLGAVHVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 142 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
....+.+++++|+++++..++.... ..|. |+++++
T Consensus 217 ~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g 254 (258)
T PRK12429 217 LVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG 254 (258)
T ss_pred cCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence 1134579999999999999886643 2354 566543
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.4e-10 Score=88.94 Aligned_cols=149 Identities=19% Similarity=0.134 Sum_probs=99.2
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||++|.... .....+....+..|+.++.++++++. +.+.+++|++||... ++...
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~-~~~~~------------- 150 (251)
T PRK12826 85 DILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAG-PRVGY------------- 150 (251)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHh-hccCC-------------
Confidence 789999988664 12223346678999999999998874 446678999998733 21100
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
+ ....|+.+|...|.++..+..+ .+++++++||+.++|+....... ..+...+....+ ...++
T Consensus 151 -~-----~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~ 216 (251)
T PRK12826 151 -P-----GLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD--AQWAEAIAAAIP------LGRLG 216 (251)
T ss_pred -C-----CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc--hHHHHHHHhcCC------CCCCc
Confidence 0 0147999999999999887654 48999999999999986443211 111122222221 12578
Q ss_pred eHHhHHHHHHHhhcCCC--CCc-eEEEecCc
Q 026820 150 HVKDVAKAQVLLFETSA--ASG-RYLCTNGI 177 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~~~ 177 (232)
+++|+++++..++.... ..| .+++.++.
T Consensus 217 ~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~ 247 (251)
T PRK12826 217 EPEDIAAAVLFLASDEARYITGQTLPVDGGA 247 (251)
T ss_pred CHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 99999999999886543 235 46665543
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.8e-10 Score=87.18 Aligned_cols=146 Identities=16% Similarity=0.070 Sum_probs=98.5
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ......+.+..|+.++.++++++.. .+..++|++||..+.++...
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------- 152 (247)
T PRK12935 86 DILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFG------------- 152 (247)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCC-------------
Confidence 78999999865411 1134567789999999999999864 33458999999744333211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
. ..|+.+|...|.+++.+..+ .++++++++|+.+.++.... ........+..+. ..+.+.
T Consensus 153 --~------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~------~~~~~~ 215 (247)
T PRK12935 153 --Q------TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE---VPEEVRQKIVAKI------PKKRFG 215 (247)
T ss_pred --C------cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh---ccHHHHHHHHHhC------CCCCCc
Confidence 1 47999999999998887665 38999999999997653221 1111122222221 234689
Q ss_pred eHHhHHHHHHHhhcCCC-CCc-eEEEecC
Q 026820 150 HVKDVAKAQVLLFETSA-ASG-RYLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~-~~~-~~~~~~~ 176 (232)
+++|++++++.++.... ..| .+++++.
T Consensus 216 ~~edva~~~~~~~~~~~~~~g~~~~i~~g 244 (247)
T PRK12935 216 QADEIAKGVVYLCRDGAYITGQQLNINGG 244 (247)
T ss_pred CHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence 99999999999886542 344 4666654
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.3e-11 Score=88.88 Aligned_cols=179 Identities=14% Similarity=0.053 Sum_probs=127.0
Q ss_pred eEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCC---CEEEEecccceeccCCCCCCCCccCCCCCCCccccc
Q 026820 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGV---RRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCK 78 (232)
Q Consensus 2 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~---~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~ 78 (232)
-|+|+|+..+.-.+.+-++-..++...||.+|+++.+.-+. -+|...||+ ..||... ..|-.|.+|.-|.
T Consensus 109 EiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstS-ElyGkv~---e~PQsE~TPFyPR--- 181 (376)
T KOG1372|consen 109 EVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTS-ELYGKVQ---EIPQSETTPFYPR--- 181 (376)
T ss_pred hhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccH-hhccccc---CCCcccCCCCCCC---
Confidence 47899988776333344566677888899999999775421 379999986 9999866 4457888888887
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC--ChhHHHHHHHHhCCCCc--cCC--cccCceeHH
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV--NASGAVLQRLLQGSKDT--QEH--YWLGAVHVK 152 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~--~~~--~~~~~i~v~ 152 (232)
++|+.+|..+=.++..|.+.+++-.+.--+++--.|.....+ +.+.+-+.++..|+... .|+ ..+||-|..
T Consensus 182 ---SPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~ 258 (376)
T KOG1372|consen 182 ---SPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAG 258 (376)
T ss_pred ---ChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhH
Confidence 699999999988888887777765553333333333322211 12233344444455444 565 789999999
Q ss_pred hHHHHHHHhhcCCCCCceEEEecCcccHHHHHHHHHhh
Q 026820 153 DVAKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKL 190 (232)
Q Consensus 153 D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~ 190 (232)
|-+++++.++.+..+....+++|+.-|.+|+++.--..
T Consensus 259 dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ 296 (376)
T KOG1372|consen 259 DYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAE 296 (376)
T ss_pred HHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHh
Confidence 99999999998887766567889999999999865433
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.17 E-value=7.4e-10 Score=85.86 Aligned_cols=145 Identities=20% Similarity=0.120 Sum_probs=97.4
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||++|...... ..+.....+..|+.+..++++++. +.+.+++|++||.+..++...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~------------- 150 (246)
T PRK05653 84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPG------------- 150 (246)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCC-------------
Confidence 78999998865411 111235668899999999998884 456789999999754332211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+.+.++++ .+++++++||+.++|+.... +............ ....++
T Consensus 151 --------~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~----~~~~~~~~~~~~~-----~~~~~~ 213 (246)
T PRK05653 151 --------QTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG----LPEEVKAEILKEI-----PLGRLG 213 (246)
T ss_pred --------CcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh----hhHHHHHHHHhcC-----CCCCCc
Confidence 147999999999998887654 48999999999999876432 1112222111110 124688
Q ss_pred eHHhHHHHHHHhhcCCC--CCc-eEEEec
Q 026820 150 HVKDVAKAQVLLFETSA--ASG-RYLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 175 (232)
+++|+++++..++.... .++ .+.++|
T Consensus 214 ~~~dva~~~~~~~~~~~~~~~g~~~~~~g 242 (246)
T PRK05653 214 QPEEVANAVAFLASDAASYITGQVIPVNG 242 (246)
T ss_pred CHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence 99999999999986532 234 355554
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.4e-09 Score=84.37 Aligned_cols=147 Identities=19% Similarity=0.231 Sum_probs=97.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc----C-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF----G-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ...+.+..+..|+.++.++++++.+. + ..++|++||....++...
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------ 146 (245)
T PRK07060 79 DGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPD------------ 146 (245)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCC------------
Confidence 79999999865411 11234566779999999999888653 2 358999999755333211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...|.+++.++.+ .+++++.+||+.+.++........ ......+.... ....+
T Consensus 147 ---------~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~-~~~~~~~~~~~------~~~~~ 210 (245)
T PRK07060 147 ---------HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD-PQKSGPMLAAI------PLGRF 210 (245)
T ss_pred ---------CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC-HHHHHHHHhcC------CCCCC
Confidence 147999999999999988764 489999999999988753321111 11111111111 12358
Q ss_pred eeHHhHHHHHHHhhcCCC--CCce-EEEec
Q 026820 149 VHVKDVAKAQVLLFETSA--ASGR-YLCTN 175 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 175 (232)
++++|+++++..++..+. ..|. +.+++
T Consensus 211 ~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~ 240 (245)
T PRK07060 211 AEVDDVAAPILFLLSDAASMVSGVSLPVDG 240 (245)
T ss_pred CCHHHHHHHHHHHcCcccCCccCcEEeECC
Confidence 999999999999997543 2354 45554
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.9e-09 Score=83.76 Aligned_cols=146 Identities=16% Similarity=0.060 Sum_probs=93.0
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||..... ......+..++.|+.++.++++++... .-..++.+++.. +..+..
T Consensus 87 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 151 (249)
T PRK09135 87 DALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH---------------AERPLK 151 (249)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh---------------hcCCCC
Confidence 7899999975431 112234678899999999999998642 112455555421 111222
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
+. +.|+.+|..+|.+++.+.++. +++++++||+.++|+....... .........+.+. ..+.++
T Consensus 152 ~~------~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~~ 217 (249)
T PRK09135 152 GY------PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFD--EEARQAILARTPL------KRIGTP 217 (249)
T ss_pred Cc------hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCC--HHHHHHHHhcCCc------CCCcCH
Confidence 22 589999999999999988764 6899999999999987543221 2222233333221 122358
Q ss_pred HhHHHHHHHhhcCC-CCCc-eEEEec
Q 026820 152 KDVAKAQVLLFETS-AASG-RYLCTN 175 (232)
Q Consensus 152 ~D~a~~~~~~~~~~-~~~~-~~~~~~ 175 (232)
+|+++++..++... ...| .|++++
T Consensus 218 ~d~a~~~~~~~~~~~~~~g~~~~i~~ 243 (249)
T PRK09135 218 EDIAEAVRFLLADASFITGQILAVDG 243 (249)
T ss_pred HHHHHHHHHHcCccccccCcEEEECC
Confidence 99999996665432 2345 577754
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=9.1e-10 Score=85.83 Aligned_cols=149 Identities=10% Similarity=0.011 Sum_probs=96.0
Q ss_pred CeEEEeecCCCCCCCC-Cc---hhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDDPK-DP---EKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~-~~---~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||........ .+ .+..++.|+.++.++++++.+. ...++|++||..+ +... .+
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~~~--------------~~ 150 (252)
T PRK06077 86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG-IRPA--------------YG 150 (252)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc-cCCC--------------CC
Confidence 7899999975431111 11 2466799999999999888754 2258999999733 2211 01
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVK 152 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 152 (232)
.+.|+.+|...|.+++.++++. ++.+.+++|+.+.++.................... .....+++++
T Consensus 151 ------~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 219 (252)
T PRK06077 151 ------LSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKF-----TLMGKILDPE 219 (252)
T ss_pred ------chHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhc-----CcCCCCCCHH
Confidence 1589999999999999988764 78999999999976532110000000001111110 1123689999
Q ss_pred hHHHHHHHhhcCCCCCc-eEEEec
Q 026820 153 DVAKAQVLLFETSAASG-RYLCTN 175 (232)
Q Consensus 153 D~a~~~~~~~~~~~~~~-~~~~~~ 175 (232)
|+|++++.++..+...| .|++++
T Consensus 220 dva~~~~~~~~~~~~~g~~~~i~~ 243 (252)
T PRK06077 220 EVAEFVAAILKIESITGQVFVLDS 243 (252)
T ss_pred HHHHHHHHHhCccccCCCeEEecC
Confidence 99999999997665555 566654
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=8.4e-10 Score=93.84 Aligned_cols=157 Identities=16% Similarity=0.055 Sum_probs=99.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||++|.... ...+....+++|+.++.+++++|.+.++++||++||+++.. . . ..+.. ...
T Consensus 161 DiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~-~-g------~p~~~-~~s------ 223 (576)
T PLN03209 161 SVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNK-V-G------FPAAI-LNL------ 223 (576)
T ss_pred CEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcc-c-C------ccccc-hhh------
Confidence 789999987532 11234567889999999999999999999999999974311 0 0 01111 111
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCc-ccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHY-WLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~~~~ 159 (232)
...|...|..+|+.+. +.|++++++|||.+.++....... .. +. .. ..+. ....+..+|+|++++
T Consensus 224 k~~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~d~~~~t--~~-v~-~~------~~d~~~gr~isreDVA~vVv 289 (576)
T PLN03209 224 FWGVLCWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET--HN-LT-LS------EEDTLFGGQVSNLQVAELMA 289 (576)
T ss_pred HHHHHHHHHHHHHHHH----HcCCCEEEEECCeecCCccccccc--cc-ee-ec------cccccCCCccCHHHHHHHHH
Confidence 1468888999998865 459999999999998764321000 00 00 00 1111 113578999999999
Q ss_pred HhhcCCC-CCc-eE-EEecCc---ccHHHHHHHHH
Q 026820 160 LLFETSA-ASG-RY-LCTNGI---YQFAEFAEKVS 188 (232)
Q Consensus 160 ~~~~~~~-~~~-~~-~~~~~~---~s~~el~~~i~ 188 (232)
.++.++. ..+ ++ ++++.. .++.++++.+-
T Consensus 290 fLasd~~as~~kvvevi~~~~~p~~~~~~~~~~ip 324 (576)
T PLN03209 290 CMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKIP 324 (576)
T ss_pred HHHcCchhccceEEEEEeCCCCCCCCHHHHHHhcc
Confidence 9998665 334 46 444432 45666665543
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.9e-10 Score=86.37 Aligned_cols=151 Identities=15% Similarity=0.040 Sum_probs=97.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCK 78 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~ 78 (232)
|+|||+||.... ...++...+++|+.++.++++++... ...++|++||....+... .+.. +.
T Consensus 86 d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~--------~~~~---~~--- 149 (248)
T PRK07806 86 DALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT--------VKTM---PE--- 149 (248)
T ss_pred cEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc--------ccCC---cc---
Confidence 789999986432 12345678899999999999999864 224899999863321110 0111 11
Q ss_pred ccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCC-hhHHHHHHHHhCCCCccCCcccCceeHHhH
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVN-ASGAVLQRLLQGSKDTQEHYWLGAVHVKDV 154 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 154 (232)
.++|+.+|...|.+++.++.+ .++++++++|+.+-++....... .....+.. .. . ....+++++|+
T Consensus 150 --~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~----~~--~--~~~~~~~~~dv 219 (248)
T PRK07806 150 --YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEA----RR--E--AAGKLYTVSEF 219 (248)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHH----HH--h--hhcccCCHHHH
Confidence 158999999999999988654 48899999988776542110000 00000000 00 0 12368999999
Q ss_pred HHHHHHhhcCCCCCc-eEEEecCc
Q 026820 155 AKAQVLLFETSAASG-RYLCTNGI 177 (232)
Q Consensus 155 a~~~~~~~~~~~~~~-~~~~~~~~ 177 (232)
+++++.+++.....| .+++++..
T Consensus 220 a~~~~~l~~~~~~~g~~~~i~~~~ 243 (248)
T PRK07806 220 AAEVARAVTAPVPSGHIEYVGGAD 243 (248)
T ss_pred HHHHHHHhhccccCccEEEecCcc
Confidence 999999998776677 46776544
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.7e-09 Score=82.90 Aligned_cols=133 Identities=19% Similarity=0.150 Sum_probs=92.4
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHH-----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAK-----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ..........+..|+.++.++++++. +.+.+++|++||.+.+++...
T Consensus 89 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------ 156 (249)
T PRK12827 89 DILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG------------ 156 (249)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCC------------
Confidence 789999998663 11122345678999999999999987 456678999999755443221
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+++.++.+ .+++++++|||.+.++...... .. ..+....+ ...+
T Consensus 157 ---------~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~-~~----~~~~~~~~------~~~~ 216 (249)
T PRK12827 157 ---------QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA-PT----EHLLNPVP------VQRL 216 (249)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc-hH----HHHHhhCC------CcCC
Confidence 147999999999998887654 3899999999999987543221 11 11111111 1134
Q ss_pred eeHHhHHHHHHHhhcCC
Q 026820 149 VHVKDVAKAQVLLFETS 165 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~ 165 (232)
.+.+|+++++..++...
T Consensus 217 ~~~~~va~~~~~l~~~~ 233 (249)
T PRK12827 217 GEPDEVAALVAFLVSDA 233 (249)
T ss_pred cCHHHHHHHHHHHcCcc
Confidence 57899999999988553
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.6e-10 Score=88.13 Aligned_cols=148 Identities=18% Similarity=0.137 Sum_probs=93.8
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHH----HcCC-CEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAK----KFGV-RRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||.... ....+...+.++.|+.++.++++++. ..+. ++++++||.+..++.+.
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~----------- 156 (264)
T PRK12829 88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPG----------- 156 (264)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCC-----------
Confidence 789999998622 11122346778999999999998874 3344 56888887644322111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCC--------hhHHHHHHHHhCCCC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVN--------ASGAVLQRLLQGSKD 139 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~--------~~~~~~~~~~~~~~~ 139 (232)
...|+.+|...|.++..++.+ .+++++++||+.++|+....... ............
T Consensus 157 ----------~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 223 (264)
T PRK12829 157 ----------RTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEK--- 223 (264)
T ss_pred ----------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhc---
Confidence 137999999999999888754 38999999999999875321100 000000011100
Q ss_pred ccCCcccCceeHHhHHHHHHHhhcCC--CCCc-eEEEec
Q 026820 140 TQEHYWLGAVHVKDVAKAQVLLFETS--AASG-RYLCTN 175 (232)
Q Consensus 140 ~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 175 (232)
.....+++++|+++++..++... ...| .+++++
T Consensus 224 ---~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~ 259 (264)
T PRK12829 224 ---ISLGRMVEPEDIAATALFLASPAARYITGQAISVDG 259 (264)
T ss_pred ---CCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCC
Confidence 01235899999999999888542 2345 455554
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=6.4e-09 Score=81.53 Aligned_cols=146 Identities=16% Similarity=0.062 Sum_probs=91.6
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHH----HHHcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEA----AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ..........++.|+.++..++++ +.+.+..++|++||... ++..
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~-~~~~------------- 151 (260)
T PRK12823 86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIAT-RGIN------------- 151 (260)
T ss_pred eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccc-cCCC-------------
Confidence 789999985321 112223355668888877755554 44555568999999733 2210
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCC--------C--CCChhHHHHHHHHhCCC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQ--------P--YVNASGAVLQRLLQGSK 138 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~--------~--~~~~~~~~~~~~~~~~~ 138 (232)
. .+|+.+|...|.+.+.++.+. ++++++++||.++++... . .......+..+...+.+
T Consensus 152 ---~------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (260)
T PRK12823 152 ---R------VPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSL 222 (260)
T ss_pred ---C------CccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCC
Confidence 0 379999999999999987664 899999999999987311 0 00112222333332222
Q ss_pred CccCCcccCceeHHhHHHHHHHhhcCCC--CCc-eEEEec
Q 026820 139 DTQEHYWLGAVHVKDVAKAQVLLFETSA--ASG-RYLCTN 175 (232)
Q Consensus 139 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 175 (232)
. .-+.+++|+++++..++.... .+| .+++++
T Consensus 223 ~------~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~g 256 (260)
T PRK12823 223 M------KRYGTIDEQVAAILFLASDEASYITGTVLPVGG 256 (260)
T ss_pred c------ccCCCHHHHHHHHHHHcCcccccccCcEEeecC
Confidence 1 124579999999999886532 345 356654
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.3e-09 Score=81.29 Aligned_cols=146 Identities=16% Similarity=0.107 Sum_probs=96.8
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||++|.... ..........+..|+.++.++++++.. .+.+++|++||.+.+++.+..
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~------------ 145 (239)
T TIGR01830 78 DILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQ------------ 145 (239)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCC------------
Confidence 789999998643 112234467788999999999998865 345689999997665553221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
+.|+.+|...|.+...++++ .|+.++++||+.+.++.... ........+....+ ..-+.
T Consensus 146 ---------~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~---~~~~~~~~~~~~~~------~~~~~ 207 (239)
T TIGR01830 146 ---------ANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDK---LSEKVKKKILSQIP------LGRFG 207 (239)
T ss_pred ---------chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhh---cChHHHHHHHhcCC------cCCCc
Confidence 47999999999988887654 48999999999886543221 11112222222211 12366
Q ss_pred eHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
+++|++++++.++... ...| .|++++.
T Consensus 208 ~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 208 TPEEVANAVAFLASDEASYITGQVIHVDGG 237 (239)
T ss_pred CHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence 8999999999888443 3345 3566543
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=3e-10 Score=88.94 Aligned_cols=150 Identities=17% Similarity=0.132 Sum_probs=98.1
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc----C-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF----G-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..++.|+.++.++++++... + -.++|++||....++.+.
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------ 149 (257)
T PRK07067 82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEAL------------ 149 (257)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCC------------
Confidence 78999999764311 12345677899999999999998642 1 147999999744333211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHH-------HHHHHHhCCCCcc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGA-------VLQRLLQGSKDTQ 141 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~-------~~~~~~~~~~~~~ 141 (232)
...|+.+|...+.+.+.++.+ .+++++++||+.++++........... ....... .
T Consensus 150 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 215 (257)
T PRK07067 150 ---------VSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVG-----E 215 (257)
T ss_pred ---------CchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHh-----h
Confidence 148999999999999888764 589999999999998643211000000 0000000 0
Q ss_pred CCcccCceeHHhHHHHHHHhhcCCC--CCc-eEEEecC
Q 026820 142 EHYWLGAVHVKDVAKAQVLLFETSA--ASG-RYLCTNG 176 (232)
Q Consensus 142 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 176 (232)
+...+.+++++|+++++..++.... ..| .+++++.
T Consensus 216 ~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg 253 (257)
T PRK07067 216 AVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGG 253 (257)
T ss_pred cCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCC
Confidence 1124578999999999999987543 345 4666543
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.6e-09 Score=82.08 Aligned_cols=146 Identities=21% Similarity=0.185 Sum_probs=97.0
Q ss_pred CeEEEeecCCCCC------CCCCchhhhHHHHHHHHHHHHHHHHHc-----C-----CCEEEEecccceeccCCCCCCCC
Q 026820 1 MGVFHLASPNTLD------DPKDPEKELLIPAVQGTLNVLEAAKKF-----G-----VRRVVLTSSISSIVPNPNWPQGK 64 (232)
Q Consensus 1 D~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~-----~~~~i~~Ss~~~~~~~~~~~~~~ 64 (232)
|+|||+||..... ......++.++.|+.++.++++++... + ..++|++||..+.++...
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----- 156 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPN----- 156 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCC-----
Confidence 7899999975431 122344677899999999999887542 1 457999999755433221
Q ss_pred ccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCcc
Q 026820 65 VIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQ 141 (232)
Q Consensus 65 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
.+.|+.+|...|.+++.++.+ .+++++++||+.+.++.... ....+...+..+. .
T Consensus 157 ----------------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~---~~~~~~~~~~~~~-~-- 214 (256)
T PRK12745 157 ----------------RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP---VTAKYDALIAKGL-V-- 214 (256)
T ss_pred ----------------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc---cchhHHhhhhhcC-C--
Confidence 147999999999999988764 58999999999998865332 1112211111111 1
Q ss_pred CCcccCceeHHhHHHHHHHhhcCCC--CCc-eEEEec
Q 026820 142 EHYWLGAVHVKDVAKAQVLLFETSA--ASG-RYLCTN 175 (232)
Q Consensus 142 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 175 (232)
....+.+.+|+++++..++.... ..| .+++++
T Consensus 215 --~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~g 249 (256)
T PRK12745 215 --PMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDG 249 (256)
T ss_pred --CcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECC
Confidence 12357799999999998885432 345 456654
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.1e-09 Score=82.86 Aligned_cols=149 Identities=17% Similarity=0.133 Sum_probs=96.5
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||++|...... ..+..+..+..|+.++.++.+++ ++.+.+++|++||.+..++....
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~------------ 150 (252)
T PRK06138 83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGR------------ 150 (252)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCc------------
Confidence 78999999865311 12223556889999987777665 44566799999997565443221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCC--hhHHHHHHHHhCCCCccCCcccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVN--ASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
+.|+.+|...+.+++.++.+. +++++++||+.++++....... .....+.....+.. ....
T Consensus 151 ---------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 216 (252)
T PRK06138 151 ---------AAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARH-----PMNR 216 (252)
T ss_pred ---------cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcC-----CCCC
Confidence 489999999999999887654 8999999999998875321100 00111111111110 1123
Q ss_pred ceeHHhHHHHHHHhhcCCCC--Cce-EEEec
Q 026820 148 AVHVKDVAKAQVLLFETSAA--SGR-YLCTN 175 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~~~--~~~-~~~~~ 175 (232)
+++++|+++++..++..+.. .|. +.+.+
T Consensus 217 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~ 247 (252)
T PRK06138 217 FGTAEEVAQAALFLASDESSFATGTTLVVDG 247 (252)
T ss_pred CcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence 78999999999999877542 344 44443
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.8e-09 Score=83.61 Aligned_cols=160 Identities=18% Similarity=0.103 Sum_probs=95.5
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHHH----HcC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAAK----KFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||....... .+..+..+++|+.++.++++++. +.+ ..++|++||..+..+.+.
T Consensus 85 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~------------ 152 (275)
T PRK05876 85 DVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAG------------ 152 (275)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCC------------
Confidence 789999998643111 12235667999999999998874 333 358999999744221111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCC-ccCC--cc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKD-TQEH--YW 145 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~ 145 (232)
...|+.+|...+.+.+.++.+ .|+.+++++|+.+.++...... .. ........... ..+. ..
T Consensus 153 ---------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~ 220 (275)
T PRK05876 153 ---------LGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSE-RI--RGAACAQSSTTGSPGPLPLQ 220 (275)
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchh-hh--cCcccccccccccccccccc
Confidence 148999999866665555533 4899999999998765322110 00 00000000011 1222 34
Q ss_pred cCceeHHhHHHHHHHhhcCCCCCceEEEecCcccHHHHHHHHH
Q 026820 146 LGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVS 188 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~ 188 (232)
+++++++|+|+.++.++.+.. .+.+.+ +....++.+.+.
T Consensus 221 ~~~~~~~dva~~~~~ai~~~~---~~~~~~-~~~~~~~~~~~~ 259 (275)
T PRK05876 221 DDNLGVDDIAQLTADAILANR---LYVLPH-AASRASIRRRFE 259 (275)
T ss_pred ccCCCHHHHHHHHHHHHHcCC---eEEecC-hhhHHHHHHHHH
Confidence 578999999999999986542 344443 334444444433
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.8e-09 Score=82.13 Aligned_cols=147 Identities=18% Similarity=0.137 Sum_probs=95.7
Q ss_pred CeEEEeecCCCCCC-----CCCchhhhHHHHHHHHHHHHHHHHHc----C---CCEEEEecccceeccCCCCCCCCccCC
Q 026820 1 MGVFHLASPNTLDD-----PKDPEKELLIPAVQGTLNVLEAAKKF----G---VRRVVLTSSISSIVPNPNWPQGKVIDE 68 (232)
Q Consensus 1 D~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~---~~~~i~~Ss~~~~~~~~~~~~~~~~~E 68 (232)
|+|||+||...... ..++....++.|+.++.++++++.+. + -.++|++||.+.+++.+..
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~-------- 153 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGE-------- 153 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCC--------
Confidence 78999999864311 11233477899999999998887543 1 1369999997665543220
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcc
Q 026820 69 TSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (232)
. ..|+.+|...|.++..++.+. +++++++||+.++|+..... .....+..+....+..
T Consensus 154 ------~------~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~--~~~~~~~~~~~~~p~~----- 214 (248)
T PRK06123 154 ------Y------IDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG--GEPGRVDRVKAGIPMG----- 214 (248)
T ss_pred ------c------cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc--CCHHHHHHHHhcCCCC-----
Confidence 0 259999999999998887654 89999999999999853221 1122222222222111
Q ss_pred cCceeHHhHHHHHHHhhcCCC--CCc-eEEEec
Q 026820 146 LGAVHVKDVAKAQVLLFETSA--ASG-RYLCTN 175 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 175 (232)
-..+++|+++++..++.... ..| .+++.+
T Consensus 215 -~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~g 246 (248)
T PRK06123 215 -RGGTAEEVARAILWLLSDEASYTTGTFIDVSG 246 (248)
T ss_pred -CCcCHHHHHHHHHHHhCccccCccCCEEeecC
Confidence 12478999999999886542 344 455543
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.8e-09 Score=82.44 Aligned_cols=147 Identities=18% Similarity=0.117 Sum_probs=92.0
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHH----HHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGT----LNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~----~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++ +.++..+++.+..++|++||.+...+.+.
T Consensus 76 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~------------- 142 (273)
T PRK06182 76 DVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPL------------- 142 (273)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCC-------------
Confidence 79999999865411 1223467788998885 45555666666679999999643111110
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCeeCCCCCCCC---------ChhHH----HHHHHHhC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAE---KNGTDVVAIHPATSLGPFPQPYV---------NASGA----VLQRLLQG 136 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~---------~~~~~----~~~~~~~~ 136 (232)
...|+.+|...+.+.+.++. ..|++++++|||.+.++...... ..... +...+...
T Consensus 143 --------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (273)
T PRK06182 143 --------GAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRST 214 (273)
T ss_pred --------ccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHh
Confidence 13799999999998776653 45899999999999876421100 00000 00111100
Q ss_pred CCCccCCcccCceeHHhHHHHHHHhhcCCCCCceEEEe
Q 026820 137 SKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCT 174 (232)
Q Consensus 137 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 174 (232)
.....+.+.+|+|++++.++........|+++
T Consensus 215 ------~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g 246 (273)
T PRK06182 215 ------YGSGRLSDPSVIADAISKAVTARRPKTRYAVG 246 (273)
T ss_pred ------hccccCCCHHHHHHHHHHHHhCCCCCceeecC
Confidence 01235679999999999998765444456554
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.4e-09 Score=80.70 Aligned_cols=145 Identities=16% Similarity=0.135 Sum_probs=95.2
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ........+..|+.++.++++++... +.+++|++||....++....
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~------------ 152 (248)
T PRK05557 85 DILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQ------------ 152 (248)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCC------------
Confidence 78999999865411 11233566789999999999888643 45689999997555543221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
..|+.+|...|.+++.++++ .+++++++||+.+.++.... ....+........+ ...+.
T Consensus 153 ---------~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~---~~~~~~~~~~~~~~------~~~~~ 214 (248)
T PRK05557 153 ---------ANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA---LPEDVKEAILAQIP------LGRLG 214 (248)
T ss_pred ---------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc---cChHHHHHHHhcCC------CCCCc
Confidence 47999999999888776653 48999999999885543221 11222222222211 22467
Q ss_pred eHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 150 HVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
+++|+++++..++.. ....|. +++.+
T Consensus 215 ~~~~va~~~~~l~~~~~~~~~g~~~~i~~ 243 (248)
T PRK05557 215 QPEEIASAVAFLASDEAAYITGQTLHVNG 243 (248)
T ss_pred CHHHHHHHHHHHcCcccCCccccEEEecC
Confidence 899999999988865 334453 55544
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=9.6e-09 Score=80.49 Aligned_cols=151 Identities=16% Similarity=0.037 Sum_probs=95.8
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ........++.|+.++.++++++.. .+ -.++|++||....++...
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~------------ 150 (259)
T PRK12384 83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKH------------ 150 (259)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCC------------
Confidence 78999999765311 1122356678999998888877654 34 348999998744333211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-----c--
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAE---KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-----Q-- 141 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-----~-- 141 (232)
...|+.+|...+.+++.++. ..|+++.++|||.++++.... ..+..+.... +.... +
T Consensus 151 ---------~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~ 217 (259)
T PRK12384 151 ---------NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ--SLLPQYAKKL--GIKPDEVEQYYID 217 (259)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh--hhhHHHHHhc--CCChHHHHHHHHH
Confidence 14899999999999888774 469999999999988764321 1111111110 00000 1
Q ss_pred CCcccCceeHHhHHHHHHHhhcCCC--CCc-eEEEecC
Q 026820 142 EHYWLGAVHVKDVAKAQVLLFETSA--ASG-RYLCTNG 176 (232)
Q Consensus 142 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 176 (232)
+.....+++++|++++++.++.+.. ..| .+++++.
T Consensus 218 ~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g 255 (259)
T PRK12384 218 KVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG 255 (259)
T ss_pred hCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCC
Confidence 1123468899999999999886542 245 4666653
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.8e-09 Score=82.17 Aligned_cols=138 Identities=20% Similarity=0.135 Sum_probs=92.8
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||..... ...+..+..++.|+.++.++++++... ...++|++||.+..++.+.
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~--------------- 146 (249)
T PRK06500 82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPN--------------- 146 (249)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCC---------------
Confidence 7899999986531 122345678899999999999999742 2247888888655544221
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCC---CCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQP---YVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
.+.|+.+|...|.+++.++.+ .+++++++||+.++++.... .......+...+....+. .-+
T Consensus 147 ------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 214 (249)
T PRK06500 147 ------SSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPL------GRF 214 (249)
T ss_pred ------ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCC------CCC
Confidence 148999999999999887754 38999999999999874211 001122223333322221 124
Q ss_pred eeHHhHHHHHHHhhcCC
Q 026820 149 VHVKDVAKAQVLLFETS 165 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~ 165 (232)
...+|+++++..++...
T Consensus 215 ~~~~~va~~~~~l~~~~ 231 (249)
T PRK06500 215 GTPEEIAKAVLYLASDE 231 (249)
T ss_pred cCHHHHHHHHHHHcCcc
Confidence 57999999999988643
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=9.1e-09 Score=81.41 Aligned_cols=162 Identities=21% Similarity=0.168 Sum_probs=103.5
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ....+.....++.|+.++.++++++.+. +..++|++||... +....
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~-~~~~~------------ 154 (276)
T PRK05875 88 HGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAA-SNTHR------------ 154 (276)
T ss_pred CEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhh-cCCCC------------
Confidence 789999996432 1111224567788999999999876543 3358999999733 21100
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
+ .+.|+.+|...|.+++.+..+. +++++++||+.+.++...... ........+.... ....+
T Consensus 155 --~------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~-~~~~~~~~~~~~~------~~~~~ 219 (276)
T PRK05875 155 --W------FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPIT-ESPELSADYRACT------PLPRV 219 (276)
T ss_pred --C------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccc-cCHHHHHHHHcCC------CCCCC
Confidence 0 1489999999999999887654 689999999998765432111 1111112222111 12346
Q ss_pred eeHHhHHHHHHHhhcCCCC--Cc-eEEEe-cCcc----cHHHHHHHHHhh
Q 026820 149 VHVKDVAKAQVLLFETSAA--SG-RYLCT-NGIY----QFAEFAEKVSKL 190 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~--~~-~~~~~-~~~~----s~~el~~~i~~~ 190 (232)
++++|+++++..++..+.. .| .++++ +..+ +..|+++.+.+.
T Consensus 220 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~ 269 (276)
T PRK05875 220 GEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGA 269 (276)
T ss_pred cCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhH
Confidence 7899999999999976543 35 46665 4444 677777766544
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.8e-09 Score=83.29 Aligned_cols=148 Identities=18% Similarity=0.123 Sum_probs=94.2
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+.....+++|+.++.++++++ ++.+.+++|++||...+.+.+.
T Consensus 75 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------- 141 (270)
T PRK06179 75 DVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPY------------- 141 (270)
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCC-------------
Confidence 78999999865411 11234678899999999988885 4567789999999744221111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCC---hhHHH--HH-HHHhCCCCccCC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVN---ASGAV--LQ-RLLQGSKDTQEH 143 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~---~~~~~--~~-~~~~~~~~~~~~ 143 (232)
...|+.+|...|.+.+.++.+ .|+++++++|+.+.++....... ..... .. ..... ...
T Consensus 142 --------~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 209 (270)
T PRK06179 142 --------MALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKA----VAK 209 (270)
T ss_pred --------ccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHH----HHh
Confidence 148999999999998887643 59999999999997764321110 11000 00 00000 000
Q ss_pred cccCceeHHhHHHHHHHhhcCCCCCceEEE
Q 026820 144 YWLGAVHVKDVAKAQVLLFETSAASGRYLC 173 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~ 173 (232)
........+|+++.++.++..+....+|..
T Consensus 210 ~~~~~~~~~~va~~~~~~~~~~~~~~~~~~ 239 (270)
T PRK06179 210 AVKKADAPEVVADTVVKAALGPWPKMRYTA 239 (270)
T ss_pred ccccCCCHHHHHHHHHHHHcCCCCCeeEec
Confidence 111345689999999999977654445644
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.9e-09 Score=80.18 Aligned_cols=143 Identities=17% Similarity=0.122 Sum_probs=96.6
Q ss_pred CeEEEeecCCCC-------CCCCCchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTL-------DDPKDPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|+|||+||.... ..........+..|+.++.++++++... +.+++|++||.+. +..
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~------------ 151 (250)
T PRK07774 85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA-WLY------------ 151 (250)
T ss_pred CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc-cCC------------
Confidence 799999997532 1111233567789999999999988753 3468999999733 211
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
. +.|+.+|...|.+++.+.++. ++.+++++||.+..+..... ........+.++.+. .
T Consensus 152 -----~------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~~------~ 212 (250)
T PRK07774 152 -----S------NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV--TPKEFVADMVKGIPL------S 212 (250)
T ss_pred -----c------cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc--CCHHHHHHHHhcCCC------C
Confidence 0 379999999999999987764 79999999998876653321 112233333333321 1
Q ss_pred CceeHHhHHHHHHHhhcCCC--CCc-eEEEec
Q 026820 147 GAVHVKDVAKAQVLLFETSA--ASG-RYLCTN 175 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 175 (232)
-+.+++|++++++.++.... ..| .|++.+
T Consensus 213 ~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~ 244 (250)
T PRK07774 213 RMGTPEDLVGMCLFLLSDEASWITGQIFNVDG 244 (250)
T ss_pred CCcCHHHHHHHHHHHhChhhhCcCCCEEEECC
Confidence 24678999999999987642 244 466654
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.3e-08 Score=79.26 Aligned_cols=148 Identities=19% Similarity=0.102 Sum_probs=94.9
Q ss_pred CeEEEeecCCCCCCCCC----chhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPKD----PEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||......... .....+.+|+.++.++++++.. .+.+++|++||.+...+...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------------- 150 (250)
T PRK08063 84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLEN------------- 150 (250)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCC-------------
Confidence 78999999765421111 1234567999999999988764 34569999999744221111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+++.++.+ .++++++++|+.+..+.... ............... ....++
T Consensus 151 --------~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~-~~~~~~~~~~~~~~~------~~~~~~ 215 (250)
T PRK08063 151 --------YTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKH-FPNREELLEDARAKT------PAGRMV 215 (250)
T ss_pred --------ccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhh-ccCchHHHHHHhcCC------CCCCCc
Confidence 148999999999999888754 58999999999997654221 111111111111111 112478
Q ss_pred eHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
+.+|++++++.++..+. ..|. +++++.
T Consensus 216 ~~~dva~~~~~~~~~~~~~~~g~~~~~~gg 245 (250)
T PRK08063 216 EPEDVANAVLFLCSPEADMIRGQTIIVDGG 245 (250)
T ss_pred CHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence 99999999999987643 2453 555543
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.8e-08 Score=80.73 Aligned_cols=147 Identities=18% Similarity=0.159 Sum_probs=98.2
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||.... ....+.....+++|+.++.++++++... .-.++|++||.....+...
T Consensus 136 D~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~-------------- 201 (300)
T PRK06128 136 DILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPT-------------- 201 (300)
T ss_pred CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCC--------------
Confidence 799999997532 1122345778999999999999998753 2248999999744221111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
...|+.+|...+.+++.++.+ .|+++.+++||.+.++..... ......+..+....+ ...+.+
T Consensus 202 -------~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~~p------~~r~~~ 267 (300)
T PRK06128 202 -------LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG-GQPPEKIPDFGSETP------MKRPGQ 267 (300)
T ss_pred -------chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC-CCCHHHHHHHhcCCC------CCCCcC
Confidence 137999999999999988765 489999999999998753221 111222222222211 124678
Q ss_pred HHhHHHHHHHhhcCCC--CCc-eEEEec
Q 026820 151 VKDVAKAQVLLFETSA--ASG-RYLCTN 175 (232)
Q Consensus 151 v~D~a~~~~~~~~~~~--~~~-~~~~~~ 175 (232)
.+|++.+++.++.... .+| .++++|
T Consensus 268 p~dva~~~~~l~s~~~~~~~G~~~~v~g 295 (300)
T PRK06128 268 PVEMAPLYVLLASQESSYVTGEVFGVTG 295 (300)
T ss_pred HHHHHHHHHHHhCccccCccCcEEeeCC
Confidence 9999999999886533 345 456654
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.4e-08 Score=79.29 Aligned_cols=147 Identities=16% Similarity=0.162 Sum_probs=94.7
Q ss_pred CeEEEeecCCCCCCCCC----chhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDDPKD----PEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||......... .....++.|+.++.++++++.+. ...++|++||..+..+.+.
T Consensus 92 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~--------------- 156 (254)
T PRK12746 92 DILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTG--------------- 156 (254)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCC---------------
Confidence 78999999865422111 12556679999999999998763 3358999998744211111
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
...|+.+|...|.+.+.++.+ .++++++++|+.+.++...... . ...+........ ....++++
T Consensus 157 ------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~-~-~~~~~~~~~~~~-----~~~~~~~~ 223 (254)
T PRK12746 157 ------SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLL-D-DPEIRNFATNSS-----VFGRIGQV 223 (254)
T ss_pred ------CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhc-c-ChhHHHHHHhcC-----CcCCCCCH
Confidence 147999999999998887664 4899999999999876432110 0 011112221111 12256789
Q ss_pred HhHHHHHHHhhcCCC--CCc-eEEEec
Q 026820 152 KDVAKAQVLLFETSA--ASG-RYLCTN 175 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~--~~~-~~~~~~ 175 (232)
+|+++++..++.... ..| .|++.+
T Consensus 224 ~dva~~~~~l~~~~~~~~~g~~~~i~~ 250 (254)
T PRK12746 224 EDIADAVAFLASSDSRWVTGQIIDVSG 250 (254)
T ss_pred HHHHHHHHHHcCcccCCcCCCEEEeCC
Confidence 999999998886542 234 465544
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.4e-09 Score=92.69 Aligned_cols=151 Identities=19% Similarity=0.127 Sum_probs=98.3
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCC-CEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGV-RRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ........++.|+.++.++++++. +.+. .++|++||..++++.+.
T Consensus 500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~------------ 567 (681)
T PRK08324 500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPN------------ 567 (681)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCC------------
Confidence 78999999754311 122345678899999999987765 3343 58999999755443221
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCee-CCCCCCCCChhHHHHHHHHhCCCC-----c--
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSL-GPFPQPYVNASGAVLQRLLQGSKD-----T-- 140 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~-G~~~~~~~~~~~~~~~~~~~~~~~-----~-- 140 (232)
...|+.+|...|.+++.++.+. |+++++++|+.+| +....... ... ......+... .
T Consensus 568 ---------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~-~~~--~~~~~~g~~~~~~~~~~~ 635 (681)
T PRK08324 568 ---------FGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGE-WIE--ARAAAYGLSEEELEEFYR 635 (681)
T ss_pred ---------cHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccch-hhh--hhhhhccCChHHHHHHHH
Confidence 1489999999999999987654 6999999999998 65432211 000 0000111110 0
Q ss_pred cCCcccCceeHHhHHHHHHHhhc--CCCCCc-eEEEec
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFE--TSAASG-RYLCTN 175 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~--~~~~~~-~~~~~~ 175 (232)
.+...+.+++++|+|+++..++. ....+| .+++++
T Consensus 636 ~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdg 673 (681)
T PRK08324 636 ARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDG 673 (681)
T ss_pred hcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence 12235578999999999999884 344456 466654
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.1e-09 Score=76.83 Aligned_cols=138 Identities=20% Similarity=0.109 Sum_probs=95.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHH
Q 026820 19 EKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEF 98 (232)
Q Consensus 19 ~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~ 98 (232)
...+.+.|-....+-++++.+.|+++|+|+|-. -||-... .+ ++|..+|+++|..+..
T Consensus 131 ~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~--d~~~~~~------------i~-------rGY~~gKR~AE~Ell~- 188 (283)
T KOG4288|consen 131 IILMDRINGTANINAVKAAAKAGVPRFVYISAH--DFGLPPL------------IP-------RGYIEGKREAEAELLK- 188 (283)
T ss_pred hHHHHHhccHhhHHHHHHHHHcCCceEEEEEhh--hcCCCCc------------cc-------hhhhccchHHHHHHHH-
Confidence 456677788888888999999999999999953 2332221 11 4899999999999765
Q ss_pred HHHcCCcEEEEcCCCeeCCCCCCCC----ChhHHHHHHHHhCCC-----Cc-cCCcccCceeHHhHHHHHHHhhcCCCCC
Q 026820 99 AEKNGTDVVAIHPATSLGPFPQPYV----NASGAVLQRLLQGSK-----DT-QEHYWLGAVHVKDVAKAQVLLFETSAAS 168 (232)
Q Consensus 99 ~~~~~~~~~ilR~~~i~G~~~~~~~----~~~~~~~~~~~~~~~-----~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~~ 168 (232)
.+++.-+|||||.+||...-... ..+..-+....++.. +. .+......+.++++|.+.+.++..+...
T Consensus 189 --~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~ 266 (283)
T KOG4288|consen 189 --KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFK 266 (283)
T ss_pred --hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcC
Confidence 44688899999999997433221 122233333333332 22 4556778999999999999999888765
Q ss_pred ceEEEecCcccHHHHHHHH
Q 026820 169 GRYLCTNGIYQFAEFAEKV 187 (232)
Q Consensus 169 ~~~~~~~~~~s~~el~~~i 187 (232)
| .+++.|+.+.-
T Consensus 267 G-------vv~i~eI~~~a 278 (283)
T KOG4288|consen 267 G-------VVTIEEIKKAA 278 (283)
T ss_pred c-------eeeHHHHHHHH
Confidence 5 34555555443
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=8.3e-09 Score=79.64 Aligned_cols=137 Identities=18% Similarity=0.123 Sum_probs=92.4
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||++|..... ...+...+.+..|+.++.++++++. +.+.+++|++||... ++...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~------------- 149 (239)
T PRK12828 84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAA-LKAGP------------- 149 (239)
T ss_pred CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHh-ccCCC-------------
Confidence 7899999875431 1112234567899999999988874 346789999999744 22110
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
.. ..|+.+|...+.++..+++. .++++.++||+.++++...... .......++
T Consensus 150 -~~------~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~-----------------~~~~~~~~~ 205 (239)
T PRK12828 150 -GM------GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADM-----------------PDADFSRWV 205 (239)
T ss_pred -Cc------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcC-----------------CchhhhcCC
Confidence 11 47999999999988877653 4899999999999876321100 000112479
Q ss_pred eHHhHHHHHHHhhcCCC--CCce-EEEec
Q 026820 150 HVKDVAKAQVLLFETSA--ASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 175 (232)
+++|+++++..++.... ..|. +.+.+
T Consensus 206 ~~~dva~~~~~~l~~~~~~~~g~~~~~~g 234 (239)
T PRK12828 206 TPEQIAAVIAFLLSDEAQAITGASIPVDG 234 (239)
T ss_pred CHHHHHHHHHHHhCcccccccceEEEecC
Confidence 99999999999997542 3454 45544
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.1e-08 Score=78.43 Aligned_cols=147 Identities=18% Similarity=0.149 Sum_probs=95.7
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||........ +..+..+..|+.++.++++++.+. +.+++|++||.....+.+
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~-------------- 154 (255)
T PRK07523 89 DILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARP-------------- 154 (255)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCC--------------
Confidence 7899999986541111 123566789999999999988643 556899999863311110
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAE---KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
. ...|+.+|...|.+++.++. ..|+++.++||+.+.++...... ....+...+....+ ...+.
T Consensus 155 -~------~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~-~~~~~~~~~~~~~~------~~~~~ 220 (255)
T PRK07523 155 -G------IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALV-ADPEFSAWLEKRTP------AGRWG 220 (255)
T ss_pred -C------CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhc-cCHHHHHHHHhcCC------CCCCc
Confidence 1 14799999999999988875 45899999999999887532111 11111112222211 22467
Q ss_pred eHHhHHHHHHHhhcCCC--CCc-eEEEec
Q 026820 150 HVKDVAKAQVLLFETSA--ASG-RYLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 175 (232)
.++|++++++.++.... .+| .+++++
T Consensus 221 ~~~dva~~~~~l~~~~~~~~~G~~i~~~g 249 (255)
T PRK07523 221 KVEELVGACVFLASDASSFVNGHVLYVDG 249 (255)
T ss_pred CHHHHHHHHHHHcCchhcCccCcEEEECC
Confidence 89999999999986532 345 355544
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.6e-08 Score=78.51 Aligned_cols=137 Identities=17% Similarity=0.095 Sum_probs=89.2
Q ss_pred CeEEEeecCCCC-CCC----CCchhhhHHHHHHHHHHHHHHHHHc-------CCCEEEEecccceeccCCCCCCCCccCC
Q 026820 1 MGVFHLASPNTL-DDP----KDPEKELLIPAVQGTLNVLEAAKKF-------GVRRVVLTSSISSIVPNPNWPQGKVIDE 68 (232)
Q Consensus 1 D~Vih~a~~~~~-~~~----~~~~~~~~~~nv~~~~~l~~~~~~~-------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E 68 (232)
|+|||+||.... ... .......+..|+.++.++++++... +..++|++||.+++++.+..
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~-------- 152 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGE-------- 152 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCc--------
Confidence 789999997533 111 1123477899999998887765432 12469999997554443210
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcc
Q 026820 69 TSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (232)
. ..|+.+|...|.+++.++.+ .+++++++||+.++++..... .............+..
T Consensus 153 ------~------~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~----- 213 (247)
T PRK09730 153 ------Y------VDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASG--GEPGRVDRVKSNIPMQ----- 213 (247)
T ss_pred ------c------cchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccC--CCHHHHHHHHhcCCCC-----
Confidence 0 26999999999998877654 489999999999999864321 1122222222222211
Q ss_pred cCceeHHhHHHHHHHhhcCC
Q 026820 146 LGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~ 165 (232)
-..+.+|+++++..++...
T Consensus 214 -~~~~~~dva~~~~~~~~~~ 232 (247)
T PRK09730 214 -RGGQPEEVAQAIVWLLSDK 232 (247)
T ss_pred -CCcCHHHHHHHHHhhcChh
Confidence 1237899999999988653
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.7e-08 Score=79.28 Aligned_cols=134 Identities=13% Similarity=0.063 Sum_probs=89.4
Q ss_pred CeEEEeecCCCCCCCCC-----chhhhHHHHHHHHHHHHHHHHH---cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPKD-----PEKELLIPAVQGTLNVLEAAKK---FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~-----~~~~~~~~nv~~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||......... .....+..|+.++.++++.+.. .+..++|++||..++.+...
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------- 146 (263)
T PRK06181 80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPT------------- 146 (263)
T ss_pred CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCC-------------
Confidence 78999999865411111 2356689999999999999853 23468999998744322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 148 (232)
...|+.+|...|.+...+..+ .++++++++||.+..+....... ..+.+.. .+.....+
T Consensus 147 --------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~ 209 (263)
T PRK06181 147 --------RSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALD---------GDGKPLGKSPMQESKI 209 (263)
T ss_pred --------ccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcc---------ccccccccccccccCC
Confidence 148999999999998776543 48999999999987543211000 0011111 12223478
Q ss_pred eeHHhHHHHHHHhhcC
Q 026820 149 VHVKDVAKAQVLLFET 164 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~ 164 (232)
++++|+|+++..++..
T Consensus 210 ~~~~dva~~i~~~~~~ 225 (263)
T PRK06181 210 MSAEECAEAILPAIAR 225 (263)
T ss_pred CCHHHHHHHHHHHhhC
Confidence 9999999999999974
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.99 E-value=7.1e-09 Score=80.84 Aligned_cols=138 Identities=13% Similarity=0.073 Sum_probs=92.0
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||++|...... ........++.|+.++.++++++.. .+..++|++||.+..++..
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~-------------- 143 (252)
T PRK08220 78 DVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRI-------------- 143 (252)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCC--------------
Confidence 78999999865411 1234567789999999999988753 3445899999874321111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCCh-------hHHHHHHHHhCCCCccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNA-------SGAVLQRLLQGSKDTQE 142 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 142 (232)
+ .+.|+.+|...|.+++.++.+ .++++++++|+.++++........ .......+..+
T Consensus 144 -~------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 210 (252)
T PRK08220 144 -G------MAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLG------ 210 (252)
T ss_pred -C------CchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhc------
Confidence 1 148999999999999888765 589999999999988753211000 00001111111
Q ss_pred CcccCceeHHhHHHHHHHhhcCC
Q 026820 143 HYWLGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~~ 165 (232)
.....+++++|++++++.++...
T Consensus 211 ~~~~~~~~~~dva~~~~~l~~~~ 233 (252)
T PRK08220 211 IPLGKIARPQEIANAVLFLASDL 233 (252)
T ss_pred CCCcccCCHHHHHHHHHHHhcch
Confidence 11236889999999999988643
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.1e-08 Score=80.12 Aligned_cols=156 Identities=15% Similarity=0.143 Sum_probs=98.5
Q ss_pred CeEEEeecCCCCCCCC---CchhhhHHHHHHHHHHHHHHHHH---cCCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDDPK---DPEKELLIPAVQGTLNVLEAAKK---FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~---~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||........ ++....++.|+.+..++.+++.. .+..++|++||..++++...
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~--------------- 149 (258)
T PRK08628 85 DGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGG--------------- 149 (258)
T ss_pred CEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCC---------------
Confidence 7899999975431111 23456788999999999888753 23358999999755433211
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC---ChhHHHHHHHHhCCCCccCCcccCc
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV---NASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...|.+++.++.+ .+++++.++||.++++...... .........+....+ . ...+
T Consensus 150 ------~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~ 218 (258)
T PRK08628 150 ------TSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIP--L---GHRM 218 (258)
T ss_pred ------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCC--c---cccC
Confidence 148999999999999988753 4899999999999986421100 000111111111111 1 1246
Q ss_pred eeHHhHHHHHHHhhcCC--CCCc-eEEEecCcccHHH
Q 026820 149 VHVKDVAKAQVLLFETS--AASG-RYLCTNGIYQFAE 182 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~~~s~~e 182 (232)
+..+|+++++..++... ...| .+.+++....+++
T Consensus 219 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~~ 255 (258)
T PRK08628 219 TTAEEIADTAVFLLSERSSHTTGQWLFVDGGYVHLDR 255 (258)
T ss_pred CCHHHHHHHHHHHhChhhccccCceEEecCCcccccc
Confidence 78999999999998654 2345 3455554444433
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.4e-08 Score=78.97 Aligned_cols=148 Identities=14% Similarity=0.118 Sum_probs=94.2
Q ss_pred CeEEEeecCCCCCC-CC---CchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD-PK---DPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~-~~---~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||++|...... .. ......++.|+.++.++++++. +.+.+++|++||.++.++...
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~------------- 148 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSG------------- 148 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCC-------------
Confidence 78999998754311 11 1224568899999999888775 445678999999755332211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCC---ChhHHHHHHHHhCCCCccCCccc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYV---NASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
...|+.+|...|.+.+.++.+. +++++++||+.++++...... ..-......+....+ ..
T Consensus 149 --------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 214 (250)
T TIGR03206 149 --------EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIP------LG 214 (250)
T ss_pred --------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCC------cc
Confidence 1479999999999988887653 899999999999876422100 000111222222211 11
Q ss_pred CceeHHhHHHHHHHhhcCCC--CCce-EEEec
Q 026820 147 GAVHVKDVAKAQVLLFETSA--ASGR-YLCTN 175 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 175 (232)
.+...+|+++++..++.... ..|. +.+++
T Consensus 215 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~ 246 (250)
T TIGR03206 215 RLGQPDDLPGAILFFSSDDASFITGQVLSVSG 246 (250)
T ss_pred CCcCHHHHHHHHHHHcCcccCCCcCcEEEeCC
Confidence 25568999999999886542 3453 45544
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.3e-08 Score=79.67 Aligned_cols=137 Identities=18% Similarity=0.115 Sum_probs=90.9
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||.... ..........+..|+.++..+++++... ...++|++||.....+..
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~-------------- 149 (258)
T PRK07890 84 DALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQP-------------- 149 (258)
T ss_pred cEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCC--------------
Confidence 789999987532 1122344677899999999999998652 224899999974322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCC--------hhHHHHHHHHhCCCCcc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVN--------ASGAVLQRLLQGSKDTQ 141 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~--------~~~~~~~~~~~~~~~~~ 141 (232)
+ .+.|+.+|...|.+++.++.+ .+++++++|||.++++....... ........+....
T Consensus 150 -~------~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 218 (258)
T PRK07890 150 -K------YGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANS---- 218 (258)
T ss_pred -C------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcC----
Confidence 1 148999999999999988764 48999999999999875321100 0011111111111
Q ss_pred CCcccCceeHHhHHHHHHHhhcC
Q 026820 142 EHYWLGAVHVKDVAKAQVLLFET 164 (232)
Q Consensus 142 ~~~~~~~i~v~D~a~~~~~~~~~ 164 (232)
....+.+++|+++++..++..
T Consensus 219 --~~~~~~~~~dva~a~~~l~~~ 239 (258)
T PRK07890 219 --DLKRLPTDDEVASAVLFLASD 239 (258)
T ss_pred --CccccCCHHHHHHHHHHHcCH
Confidence 112467899999999998864
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.3e-08 Score=77.87 Aligned_cols=148 Identities=16% Similarity=0.137 Sum_probs=94.3
Q ss_pred CeEEEeecCCCCC-----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD-----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||..... .........+..|+.++.++++.+. +.+.+++|++||.+..++...
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------ 150 (251)
T PRK07231 83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPG------------ 150 (251)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCC------------
Confidence 7899999975331 1122345678899988777777665 356678999999754322111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCC-hhHHHHHHHHhCCCCccCCcccC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVN-ASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+++.++.+. ++++++++||.+.++....... ........+.... ....
T Consensus 151 ---------~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~------~~~~ 215 (251)
T PRK07231 151 ---------LGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATI------PLGR 215 (251)
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCC------CCCC
Confidence 1479999999999988887643 8999999999986543221100 0001111222211 1235
Q ss_pred ceeHHhHHHHHHHhhcCCC--CCce-EEEec
Q 026820 148 AVHVKDVAKAQVLLFETSA--ASGR-YLCTN 175 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 175 (232)
+++++|+|.+++.++..+. ..|. +.+.|
T Consensus 216 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g 246 (251)
T PRK07231 216 LGTPEDIANAALFLASDEASWITGVTLVVDG 246 (251)
T ss_pred CcCHHHHHHHHHHHhCccccCCCCCeEEECC
Confidence 7899999999999996543 3354 45544
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=8.9e-08 Score=73.36 Aligned_cols=140 Identities=19% Similarity=0.130 Sum_probs=86.1
Q ss_pred CeEEEeecCCCCCC-CCC---chhhhHHHHHHHH----HHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD-PKD---PEKELLIPAVQGT----LNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~-~~~---~~~~~~~~nv~~~----~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||++|...... ... .....+..|+.+. +++++++.+.+ +++|++||..+..+...
T Consensus 73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~~~------------- 138 (227)
T PRK08219 73 DVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRANPG------------- 138 (227)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcCCC-------------
Confidence 78999999865311 111 2344578888884 44555454444 58999998744221111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc-C-CcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN-G-TDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~-~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
. ..|+.+|...|.++..++... + +++.+++|+.+.++... .+... .+.. . ....+++
T Consensus 139 --~------~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~-------~~~~~--~~~~--~--~~~~~~~ 197 (227)
T PRK08219 139 --W------GSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQR-------GLVAQ--EGGE--Y--DPERYLR 197 (227)
T ss_pred --C------chHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhh-------hhhhh--hccc--c--CCCCCCC
Confidence 1 479999999999888876542 4 78888888876543211 01100 0110 1 2346899
Q ss_pred HHhHHHHHHHhhcCCCCCceEEEec
Q 026820 151 VKDVAKAQVLLFETSAASGRYLCTN 175 (232)
Q Consensus 151 v~D~a~~~~~~~~~~~~~~~~~~~~ 175 (232)
++|++++++.+++++.....+++.-
T Consensus 198 ~~dva~~~~~~l~~~~~~~~~~~~~ 222 (227)
T PRK08219 198 PETVAKAVRFAVDAPPDAHITEVVV 222 (227)
T ss_pred HHHHHHHHHHHHcCCCCCccceEEE
Confidence 9999999999998765333455543
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=8.2e-08 Score=76.62 Aligned_cols=146 Identities=15% Similarity=0.095 Sum_probs=96.6
Q ss_pred CeEEEeecCCCCC-----CCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLD-----DPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||..... ...+.....++.|+.++.++++++... ...++|++||.+...+...
T Consensus 126 D~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~-------------- 191 (290)
T PRK06701 126 DILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNET-------------- 191 (290)
T ss_pred CEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCC--------------
Confidence 7899999975431 111223567899999999999998753 2248999999744222111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
. ..|+.+|...+.+++.++.+. |+++++++||.+..+..... .....+..+.... ....+.+
T Consensus 192 -~------~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~--~~~~~~~~~~~~~------~~~~~~~ 256 (290)
T PRK06701 192 -L------IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSD--FDEEKVSQFGSNT------PMQRPGQ 256 (290)
T ss_pred -c------chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccc--cCHHHHHHHHhcC------CcCCCcC
Confidence 0 379999999999999988764 89999999999987643221 1112222221111 1235789
Q ss_pred HHhHHHHHHHhhcCCC--CCce-EEEec
Q 026820 151 VKDVAKAQVLLFETSA--ASGR-YLCTN 175 (232)
Q Consensus 151 v~D~a~~~~~~~~~~~--~~~~-~~~~~ 175 (232)
++|++++++.++.... .+|. +.+++
T Consensus 257 ~~dva~~~~~ll~~~~~~~~G~~i~idg 284 (290)
T PRK06701 257 PEELAPAYVFLASPDSSYITGQMLHVNG 284 (290)
T ss_pred HHHHHHHHHHHcCcccCCccCcEEEeCC
Confidence 9999999999987643 3453 45544
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.9e-08 Score=76.29 Aligned_cols=139 Identities=18% Similarity=0.183 Sum_probs=87.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHH----HHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNV----LEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l----~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|.|+|++|...... ..+..+..++.|+.++.++ ++++.+.+.+++|++||.....+...
T Consensus 76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------------- 142 (256)
T PRK08017 76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPG------------- 142 (256)
T ss_pred eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCC-------------
Confidence 57899998754311 1223457789999988776 55566667779999998633221110
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHH---HHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFA---EKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 148 (232)
.+.|+.+|...|.+...+. ...+++++++|||.+..+.... +.......+.. .+...+.+
T Consensus 143 --------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~--------~~~~~~~~~~~~~~~~~~~~ 206 (256)
T PRK08017 143 --------RGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDN--------VNQTQSDKPVENPGIAARFT 206 (256)
T ss_pred --------ccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhc--------ccchhhccchhhhHHHhhcC
Confidence 1479999999999877553 3458999999998775432110 00000011110 11123467
Q ss_pred eeHHhHHHHHHHhhcCCCCC
Q 026820 149 VHVKDVAKAQVLLFETSAAS 168 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~~ 168 (232)
++++|+++++..++.++...
T Consensus 207 ~~~~d~a~~~~~~~~~~~~~ 226 (256)
T PRK08017 207 LGPEAVVPKLRHALESPKPK 226 (256)
T ss_pred CCHHHHHHHHHHHHhCCCCC
Confidence 99999999999999776543
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=8.8e-08 Score=75.90 Aligned_cols=96 Identities=22% Similarity=0.221 Sum_probs=69.0
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHH----HHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQG----TLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||........ +.....+++|+.+ +++++..+.+.+..++|++||.....+.+
T Consensus 78 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~-------------- 143 (277)
T PRK05993 78 DALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMK-------------- 143 (277)
T ss_pred cEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCC--------------
Confidence 7899999986542111 1234678899988 66677777777777999999963321110
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCeeCC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAE---KNGTDVVAIHPATSLGP 117 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~ 117 (232)
+ ...|+.+|...|.+.+.+.. ..|+++++++||.+-.+
T Consensus 144 -~------~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 144 -Y------RGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred -c------cchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 1 14899999999999888763 45999999999988544
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=5.6e-08 Score=76.16 Aligned_cols=149 Identities=19% Similarity=0.149 Sum_probs=95.6
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc-----CCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF-----GVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ......+.++.|+.++.++++++... +..++|++||.+.+++.+.. .
T Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-----~----- 160 (259)
T PRK08213 91 DILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-----V----- 160 (259)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-----c-----
Confidence 78999999753311 11223466789999999999987643 55689999997554443221 0
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
.+ ...|+.+|...|.+++.++++ .++.+.+++|+.+-.+... .....+...+..+.+. .-+
T Consensus 161 -~~------~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~---~~~~~~~~~~~~~~~~------~~~ 224 (259)
T PRK08213 161 -MD------TIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR---GTLERLGEDLLAHTPL------GRL 224 (259)
T ss_pred -cC------cchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh---hhhHHHHHHHHhcCCC------CCC
Confidence 01 148999999999999998765 3789999999888654322 1223333333333221 124
Q ss_pred eeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 149 VHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
...+|+++++..++... ...|. +.+++
T Consensus 225 ~~~~~va~~~~~l~~~~~~~~~G~~~~~~~ 254 (259)
T PRK08213 225 GDDEDLKGAALLLASDASKHITGQILAVDG 254 (259)
T ss_pred cCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence 46899999988887543 23453 34444
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=6.3e-08 Score=75.43 Aligned_cols=136 Identities=13% Similarity=0.054 Sum_probs=87.3
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ....+...+.++.|+.++..+++++ .+.+..++|++||.+...+..
T Consensus 76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------- 142 (248)
T PRK10538 76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYA------------- 142 (248)
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCC-------------
Confidence 789999997431 1122234677899999966666554 455667999999974321110
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCC-CChhHHHHHHHHhCCCCccCCcccC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPY-VNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
. .+.|+.+|...|.+.+.++.+ .++.+.+++||.+.|+..... ............. ...
T Consensus 143 --~------~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~---------~~~ 205 (248)
T PRK10538 143 --G------GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQ---------NTV 205 (248)
T ss_pred --C------CchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhcc---------ccC
Confidence 1 148999999999999888765 379999999999986543210 0000111111111 114
Q ss_pred ceeHHhHHHHHHHhhcCCC
Q 026820 148 AVHVKDVAKAQVLLFETSA 166 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~~ 166 (232)
++..+|+|++++.++..+.
T Consensus 206 ~~~~~dvA~~~~~l~~~~~ 224 (248)
T PRK10538 206 ALTPEDVSEAVWWVATLPA 224 (248)
T ss_pred CCCHHHHHHHHHHHhcCCC
Confidence 5789999999999986553
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=5e-08 Score=76.96 Aligned_cols=137 Identities=11% Similarity=0.045 Sum_probs=87.4
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHHHHHHH----HHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTLNVLEA----AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||........ ...+..++.|+.++.++.++ +.+.+..++|++||.....+.+.
T Consensus 79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~------------- 145 (270)
T PRK05650 79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPA------------- 145 (270)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCC-------------
Confidence 7899999986541111 12344678898777776665 45556679999999744221111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++++++|+.+..+............ ....... ....++
T Consensus 146 --------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~------~~~~~~ 210 (270)
T PRK05650 146 --------MSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAM-KAQVGKL------LEKSPI 210 (270)
T ss_pred --------chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhH-HHHHHHH------hhcCCC
Confidence 148999999998888887765 3899999999999766432211111111 1111000 012467
Q ss_pred eHHhHHHHHHHhhcCC
Q 026820 150 HVKDVAKAQVLLFETS 165 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~ 165 (232)
+++|+|+.++.++.+.
T Consensus 211 ~~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 211 TAADIADYIYQQVAKG 226 (270)
T ss_pred CHHHHHHHHHHHHhCC
Confidence 8999999999999754
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.6e-08 Score=75.40 Aligned_cols=148 Identities=16% Similarity=0.099 Sum_probs=94.9
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..++.|+.++.++++++... +-.++|++||... +..
T Consensus 89 D~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~-~~~--------------- 152 (258)
T PRK09134 89 TLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRV-WNL--------------- 152 (258)
T ss_pred CEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhh-cCC---------------
Confidence 7999999975431 112234677899999999999987653 2347888776422 110
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
.+. ...|+.+|...|.+.+.++++. ++.+++++||.+...... .... ........+ .+ ...+
T Consensus 153 ~p~-----~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~----~~~~-~~~~~~~~~--~~----~~~~ 216 (258)
T PRK09134 153 NPD-----FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ----SPED-FARQHAATP--LG----RGST 216 (258)
T ss_pred CCC-----chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc----ChHH-HHHHHhcCC--CC----CCcC
Confidence 011 1479999999999999987654 489999999988653211 1111 122222211 11 2467
Q ss_pred HHhHHHHHHHhhcCCCCCce-EEEec-CcccH
Q 026820 151 VKDVAKAQVLLFETSAASGR-YLCTN-GIYQF 180 (232)
Q Consensus 151 v~D~a~~~~~~~~~~~~~~~-~~~~~-~~~s~ 180 (232)
++|+|+++..+++.+...|. +.+++ ..+++
T Consensus 217 ~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~ 248 (258)
T PRK09134 217 PEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAW 248 (258)
T ss_pred HHHHHHHHHHHhcCCCcCCCEEEECCCeeccc
Confidence 99999999999987766674 55544 43433
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.3e-07 Score=72.80 Aligned_cols=147 Identities=16% Similarity=0.105 Sum_probs=92.6
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ........++.|+.++.++.+++ ++.+..++|++||. ..++...
T Consensus 70 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~-~~~~~~~------------- 135 (234)
T PRK07577 70 DAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSR-AIFGALD------------- 135 (234)
T ss_pred cEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccc-cccCCCC-------------
Confidence 78999999865411 12233567788988888777665 34566799999997 4443221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+++.++.+ .|+.++++|||.+..+...............+....+ .....
T Consensus 136 --------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 201 (234)
T PRK07577 136 --------RTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIP------MRRLG 201 (234)
T ss_pred --------chHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCC------CCCCc
Confidence 148999999999998877654 4899999999998765422110101111112222111 11245
Q ss_pred eHHhHHHHHHHhhcCCC--CCce-EEEec
Q 026820 150 HVKDVAKAQVLLFETSA--ASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 175 (232)
..+|++.++..++..+. ..|. +.+++
T Consensus 202 ~~~~~a~~~~~l~~~~~~~~~g~~~~~~g 230 (234)
T PRK07577 202 TPEEVAAAIAFLLSDDAGFITGQVLGVDG 230 (234)
T ss_pred CHHHHHHHHHHHhCcccCCccceEEEecC
Confidence 78999999999986542 3454 44443
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.8e-08 Score=75.06 Aligned_cols=96 Identities=24% Similarity=0.152 Sum_probs=69.6
Q ss_pred CeEEEeecCC-CC----CCCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPN-TL----DDPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~-~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.. .. ....+.....+..|+.++.++++++. +.+..++|++||...+.+...
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~------------ 142 (238)
T PRK08264 75 TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPN------------ 142 (238)
T ss_pred CEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCC------------
Confidence 7899999983 22 11122335677899999999998865 345568999999744221111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGP 117 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~ 117 (232)
...|+.+|...|.+...++.+ .+++++++||+.+.++
T Consensus 143 ---------~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~ 182 (238)
T PRK08264 143 ---------LGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTD 182 (238)
T ss_pred ---------chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccc
Confidence 148999999999998887765 3899999999998765
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.2e-08 Score=75.76 Aligned_cols=135 Identities=15% Similarity=0.021 Sum_probs=90.5
Q ss_pred CeEEEeecCCCCC------CCCCchhhhHHHHHHHHHHHHHHHHH---cCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD------DPKDPEKELLIPAVQGTLNVLEAAKK---FGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||..... .......+.++.|+.++.++++++.. ....++|++||....++.+.
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~------------ 153 (255)
T PRK05717 86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPD------------ 153 (255)
T ss_pred CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCC------------
Confidence 7899999986431 11223457889999999999999863 22257999998755333211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
.+.|+.+|...|.+++.++++. ++++.+++|+.+.++..... .... ........ .+ ...+.
T Consensus 154 ---------~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~--~~~~-~~~~~~~~---~~--~~~~~ 216 (255)
T PRK05717 154 ---------TEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQR--RAEP-LSEADHAQ---HP--AGRVG 216 (255)
T ss_pred ---------CcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccc--cchH-HHHHHhhc---CC--CCCCc
Confidence 1479999999999999988765 58999999999988642211 1111 11111111 11 12467
Q ss_pred eHHhHHHHHHHhhcC
Q 026820 150 HVKDVAKAQVLLFET 164 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~ 164 (232)
+.+|++.++..++..
T Consensus 217 ~~~~va~~~~~l~~~ 231 (255)
T PRK05717 217 TVEDVAAMVAWLLSR 231 (255)
T ss_pred CHHHHHHHHHHHcCc
Confidence 899999999988854
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=8.3e-08 Score=73.79 Aligned_cols=148 Identities=16% Similarity=0.120 Sum_probs=95.0
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~ 76 (232)
|++||++|...... ..+.....++.|+.++.+++++....+..++|++||.++..+.+.
T Consensus 71 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~----------------- 133 (230)
T PRK07041 71 DHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSAS----------------- 133 (230)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCc-----------------
Confidence 78999999754311 123356778999999999999766556679999998744221111
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHc-CCcEEEEcCCCeeCCCCCCCC-ChhHHHHHHHHhCCCCccCCcccCceeHHhH
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEKN-GTDVVAIHPATSLGPFPQPYV-NASGAVLQRLLQGSKDTQEHYWLGAVHVKDV 154 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 154 (232)
.+.|+.+|...|.+.+.++.+. ++++++++|+.+-.+...... ..............+ ...+...+|+
T Consensus 134 ----~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dv 203 (230)
T PRK07041 134 ----GVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP------ARRVGQPEDV 203 (230)
T ss_pred ----chHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC------CCCCcCHHHH
Confidence 1589999999999999887654 678889999887543211000 000111122221111 1124578999
Q ss_pred HHHHHHhhcCCCCCc-eEEEec
Q 026820 155 AKAQVLLFETSAASG-RYLCTN 175 (232)
Q Consensus 155 a~~~~~~~~~~~~~~-~~~~~~ 175 (232)
++++..++......| .+.+.+
T Consensus 204 a~~~~~l~~~~~~~G~~~~v~g 225 (230)
T PRK07041 204 ANAILFLAANGFTTGSTVLVDG 225 (230)
T ss_pred HHHHHHHhcCCCcCCcEEEeCC
Confidence 999999998765556 466654
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.86 E-value=1e-08 Score=79.20 Aligned_cols=141 Identities=21% Similarity=0.196 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 026820 26 AVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTD 105 (232)
Q Consensus 26 nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 105 (232)
......+++++|++.|+++||+ ||.+..+ ++.....|. .+....|...|+.+++ .+++
T Consensus 79 ~~~~~~~li~Aa~~agVk~~v~-ss~~~~~-----------~~~~~~~p~------~~~~~~k~~ie~~l~~----~~i~ 136 (233)
T PF05368_consen 79 ELEQQKNLIDAAKAAGVKHFVP-SSFGADY-----------DESSGSEPE------IPHFDQKAEIEEYLRE----SGIP 136 (233)
T ss_dssp HHHHHHHHHHHHHHHT-SEEEE-SEESSGT-----------TTTTTSTTH------HHHHHHHHHHHHHHHH----CTSE
T ss_pred hhhhhhhHHHhhhccccceEEE-EEecccc-----------ccccccccc------chhhhhhhhhhhhhhh----cccc
Confidence 4566789999999999999997 5442321 111111111 2455678888877654 4999
Q ss_pred EEEEcCCCeeCCCCCCCCChhHHHHH-HHHhCC--CCc-cCC--cccCc-eeHHhHHHHHHHhhcCCCCC--ce-EEEec
Q 026820 106 VVAIHPATSLGPFPQPYVNASGAVLQ-RLLQGS--KDT-QEH--YWLGA-VHVKDVAKAQVLLFETSAAS--GR-YLCTN 175 (232)
Q Consensus 106 ~~ilR~~~i~G~~~~~~~~~~~~~~~-~~~~~~--~~~-~~~--~~~~~-i~v~D~a~~~~~~~~~~~~~--~~-~~~~~ 175 (232)
++++|++..+... ...+.. ...... ... .++ ....+ ++.+|++++++.++..+... +. +.+.+
T Consensus 137 ~t~i~~g~f~e~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~ 209 (233)
T PF05368_consen 137 YTIIRPGFFMENL-------LPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG 209 (233)
T ss_dssp BEEEEE-EEHHHH-------HTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG
T ss_pred ceeccccchhhhh-------hhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC
Confidence 9999999765321 100011 001111 111 222 34456 49999999999999887665 34 46677
Q ss_pred CcccHHHHHHHHHhhCCCCCC
Q 026820 176 GIYQFAEFAEKVSKLFPEYPI 196 (232)
Q Consensus 176 ~~~s~~el~~~i~~~~p~~~~ 196 (232)
+.+|..|+++.+.+.+ +.++
T Consensus 210 ~~~t~~eia~~~s~~~-G~~v 229 (233)
T PF05368_consen 210 ETLTYNEIAAILSKVL-GKKV 229 (233)
T ss_dssp GEEEHHHHHHHHHHHH-TSEE
T ss_pred CCCCHHHHHHHHHHHH-CCcc
Confidence 8899999999999998 5544
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-07 Score=71.92 Aligned_cols=139 Identities=16% Similarity=0.140 Sum_probs=97.4
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||.||.... ....++++.++++|+.|+.+..++. .+.+..++|.+||.++.|.-+.
T Consensus 83 DiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~------------- 149 (246)
T COG4221 83 DILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPG------------- 149 (246)
T ss_pred cEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCC-------------
Confidence 899999999765 2222345788899999998888874 3444459999999865332222
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCC-CCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQP-YVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
.+.|+.+|+....+...+.++. +++++.+-||.+-..-... ..........+...+. ..
T Consensus 150 --------~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~---------~~ 212 (246)
T COG4221 150 --------GAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGG---------TA 212 (246)
T ss_pred --------CccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccC---------CC
Confidence 1589999999999988877654 8999999999884432111 1111222333333333 68
Q ss_pred eeHHhHHHHHHHhhcCCCCCc
Q 026820 149 VHVKDVAKAQVLLFETSAASG 169 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~~~ 169 (232)
+..+|+|+++.+++.+|..-.
T Consensus 213 l~p~dIA~~V~~~~~~P~~vn 233 (246)
T COG4221 213 LTPEDIAEAVLFAATQPQHVN 233 (246)
T ss_pred CCHHHHHHHHHHHHhCCCccc
Confidence 899999999999999987655
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=4.2e-08 Score=76.32 Aligned_cols=146 Identities=23% Similarity=0.176 Sum_probs=94.6
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||++|..... .........+..|+.++.++++++... +..++|++||.....+...
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 152 (250)
T PRK12939 86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPK------------- 152 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCC-------------
Confidence 7899999986531 111233556789999999999887543 3348999999644322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+++.++.+ .++.+++++||.+..+..... .. ..+...+..+. ....++
T Consensus 153 --------~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-~~-~~~~~~~~~~~------~~~~~~ 216 (250)
T PRK12939 153 --------LGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYV-PA-DERHAYYLKGR------ALERLQ 216 (250)
T ss_pred --------cchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCcccccc-CC-hHHHHHHHhcC------CCCCCC
Confidence 137999999999999887654 489999999998866543211 11 11222222221 233578
Q ss_pred eHHhHHHHHHHhhcCCC--CCce-EEEec
Q 026820 150 HVKDVAKAQVLLFETSA--ASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 175 (232)
+++|+++++..++.... ..|. +.+++
T Consensus 217 ~~~dva~~~~~l~~~~~~~~~G~~i~~~g 245 (250)
T PRK12939 217 VPDDVAGAVLFLLSDAARFVTGQLLPVNG 245 (250)
T ss_pred CHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 99999999999986542 3454 34444
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.2e-07 Score=74.14 Aligned_cols=146 Identities=17% Similarity=0.114 Sum_probs=96.2
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||....... .....+.+..|+.++.++++++.. .+..++|++||.+..++....
T Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------------ 158 (255)
T PRK06841 91 DILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERH------------ 158 (255)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCC------------
Confidence 789999998653111 122345789999999999998764 355689999997554432221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
..|+.+|...|.+.+.++.+ .++.+.+++||.+..+....... ......+.... ....+.
T Consensus 159 ---------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~------~~~~~~ 221 (255)
T PRK06841 159 ---------VAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA--GEKGERAKKLI------PAGRFA 221 (255)
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc--hhHHHHHHhcC------CCCCCc
Confidence 37999999999999888765 48999999999987653221110 11111111111 122578
Q ss_pred eHHhHHHHHHHhhcCCC--CCce-EEEec
Q 026820 150 HVKDVAKAQVLLFETSA--ASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 175 (232)
+.+|++++++.++.... .+|. ..++|
T Consensus 222 ~~~~va~~~~~l~~~~~~~~~G~~i~~dg 250 (255)
T PRK06841 222 YPEEIAAAALFLASDAAAMITGENLVIDG 250 (255)
T ss_pred CHHHHHHHHHHHcCccccCccCCEEEECC
Confidence 99999999999986542 3454 34543
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.7e-08 Score=80.25 Aligned_cols=144 Identities=12% Similarity=-0.016 Sum_probs=87.3
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCC------CEEEEecccceeccCCCCCCCCcc
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGV------RRVVLTSSISSIVPNPNWPQGKVI 66 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~------~~~i~~Ss~~~~~~~~~~~~~~~~ 66 (232)
|+|||+||...... ........+++|+.++.++++++ .+.+. .++|++||.+..++.+.
T Consensus 85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------- 157 (287)
T PRK06194 85 HLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPA------- 157 (287)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC-------
Confidence 79999999976421 11233456889999999987773 44432 48999999755432211
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcC-----CcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-
Q 026820 67 DETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNG-----TDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT- 140 (232)
Q Consensus 67 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~- 140 (232)
.+.|+.+|...|.++..+..+.+ +.+.++.|+.+..+- .+...+.+..
T Consensus 158 --------------~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~------------~~~~~~~~~~~ 211 (287)
T PRK06194 158 --------------MGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI------------WQSERNRPADL 211 (287)
T ss_pred --------------CcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc------------ccccccCchhc
Confidence 14799999999999998876543 555566665553221 1111222222
Q ss_pred cC--CcccCceeHHhHHHHHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhC
Q 026820 141 QE--HYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 141 ~~--~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~ 191 (232)
++ .+.+++++++|++..+.... .++..|+++.+.+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~--------------~~s~~dva~~i~~~~ 250 (287)
T PRK06194 212 ANTAPPTRSQLIAQAMSQKAVGSG--------------KVTAEEVAQLVFDAI 250 (287)
T ss_pred ccCccccchhhHHHHHHHhhhhcc--------------CCCHHHHHHHHHHHH
Confidence 22 24567777777766543221 156666666666544
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.6e-07 Score=73.33 Aligned_cols=136 Identities=15% Similarity=0.152 Sum_probs=89.0
Q ss_pred CeEEEeecCCCCCCCCC----chhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDDPKD----PEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||......... ..+..+++|+.++..+++++... ...++|++||.+...+.+.
T Consensus 90 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 154 (252)
T PRK12747 90 DILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD--------------- 154 (252)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCC---------------
Confidence 78999999754311111 23566789999999999887653 2248999999744221110
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
...|+.+|...+.+++.++.+ .|+++.++.||.+.++....... ........... .....+.++
T Consensus 155 ------~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~ 221 (252)
T PRK12747 155 ------FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS--DPMMKQYATTI-----SAFNRLGEV 221 (252)
T ss_pred ------chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc--CHHHHHHHHhc-----CcccCCCCH
Confidence 148999999999999988765 38999999999997764221000 01111111111 011247789
Q ss_pred HhHHHHHHHhhcC
Q 026820 152 KDVAKAQVLLFET 164 (232)
Q Consensus 152 ~D~a~~~~~~~~~ 164 (232)
+|+++++..++..
T Consensus 222 ~dva~~~~~l~s~ 234 (252)
T PRK12747 222 EDIADTAAFLASP 234 (252)
T ss_pred HHHHHHHHHHcCc
Confidence 9999999998864
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=5.2e-08 Score=76.17 Aligned_cols=94 Identities=23% Similarity=0.258 Sum_probs=65.2
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHH----HHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEA----AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||....... .......+++|+.++.++.+. +.+.+.+++|++||.+...+.+.
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~------------- 141 (257)
T PRK09291 75 DVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPF------------- 141 (257)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCC-------------
Confidence 789999997653111 112345677888877766554 44556679999999744222111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCee
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSL 115 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~ 115 (232)
. ..|+.+|...|.+.+.+..+ .|++++++||+.+.
T Consensus 142 --~------~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~ 179 (257)
T PRK09291 142 --T------GAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYL 179 (257)
T ss_pred --c------chhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence 1 48999999999998876643 59999999998773
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=9.9e-08 Score=74.29 Aligned_cols=144 Identities=17% Similarity=0.098 Sum_probs=93.1
Q ss_pred CeEEEeecCCCCC-------------CCCCchhhhHHHHHHHHHHHHHHHH----Hc-CCCEEEEecccceeccCCCCCC
Q 026820 1 MGVFHLASPNTLD-------------DPKDPEKELLIPAVQGTLNVLEAAK----KF-GVRRVVLTSSISSIVPNPNWPQ 62 (232)
Q Consensus 1 D~Vih~a~~~~~~-------------~~~~~~~~~~~~nv~~~~~l~~~~~----~~-~~~~~i~~Ss~~~~~~~~~~~~ 62 (232)
|+|||+||..... ...+.....+..|+.++..+.+++. +. .-.++|++||. ..++...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~-~~~~~~~--- 159 (253)
T PRK08217 84 NGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSI-ARAGNMG--- 159 (253)
T ss_pred CEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccc-cccCCCC---
Confidence 7899999964320 0112234567889999987776543 22 22368888886 4343221
Q ss_pred CCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCC
Q 026820 63 GKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKD 139 (232)
Q Consensus 63 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 139 (232)
. ..|+.+|...|.+++.++.+ .+++++.++|+.+.++.... ........+....+
T Consensus 160 ------------~------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~~- 217 (253)
T PRK08217 160 ------------Q------TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA---MKPEALERLEKMIP- 217 (253)
T ss_pred ------------C------chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc---cCHHHHHHHHhcCC-
Confidence 1 47999999999998888754 58999999999998764322 11222222222221
Q ss_pred ccCCcccCceeHHhHHHHHHHhhcCCCCCc-eEEEec
Q 026820 140 TQEHYWLGAVHVKDVAKAQVLLFETSAASG-RYLCTN 175 (232)
Q Consensus 140 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~ 175 (232)
...+.+++|+++++..++......| .++++|
T Consensus 218 -----~~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~g 249 (253)
T PRK08217 218 -----VGRLGEPEEIAHTVRFIIENDYVTGRVLEIDG 249 (253)
T ss_pred -----cCCCcCHHHHHHHHHHHHcCCCcCCcEEEeCC
Confidence 2246789999999999987655556 455554
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.7e-07 Score=72.93 Aligned_cols=147 Identities=16% Similarity=0.069 Sum_probs=94.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... .....++.++.|+.+..++++++.. .+ ..++|++||... +....
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~-~~~~~------------ 148 (248)
T TIGR01832 82 DILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLS-FQGGI------------ 148 (248)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHh-ccCCC------------
Confidence 78999999865311 1123456788999999999988753 23 358999999733 22111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
. ...|+.+|...+.+++.++++. |+++++++||.+..+.... ..........+... .+ ...+
T Consensus 149 --~------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~-~~~~~~~~~~~~~~----~~--~~~~ 213 (248)
T TIGR01832 149 --R------VPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQA-LRADEDRNAAILER----IP--AGRW 213 (248)
T ss_pred --C------CchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhc-cccChHHHHHHHhc----CC--CCCC
Confidence 0 1379999999999999988764 8999999999997653211 10001111111111 11 2368
Q ss_pred eeHHhHHHHHHHhhcCCC--CCceE-EEec
Q 026820 149 VHVKDVAKAQVLLFETSA--ASGRY-LCTN 175 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~--~~~~~-~~~~ 175 (232)
+..+|+|+++..++.... .+|.+ .+.+
T Consensus 214 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dg 243 (248)
T TIGR01832 214 GTPDDIGGPAVFLASSASDYVNGYTLAVDG 243 (248)
T ss_pred cCHHHHHHHHHHHcCccccCcCCcEEEeCC
Confidence 899999999999986533 34544 4443
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=98.81 E-value=1e-07 Score=73.88 Aligned_cols=146 Identities=14% Similarity=0.088 Sum_probs=92.3
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... .........++.|+.++.++++++.. .+..++|++||....++.+..
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~------------ 149 (245)
T PRK12936 82 DILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQ------------ 149 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCC------------
Confidence 7899999986431 11234467789999999988887642 355689999997555543221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
..|+.+|...+.+.+.++.+ .++++++++|+.+..+.... ............ . ....+.
T Consensus 150 ---------~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~----~~~~~~~~~~~~-~----~~~~~~ 211 (245)
T PRK12936 150 ---------ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK----LNDKQKEAIMGA-I----PMKRMG 211 (245)
T ss_pred ---------cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc----cChHHHHHHhcC-C----CCCCCc
Confidence 37999999888887776654 48999999999875432211 111111111111 0 122356
Q ss_pred eHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
+.+|+++++..++.... ..|. +++++.
T Consensus 212 ~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g 241 (245)
T PRK12936 212 TGAEVASAVAYLASSEAAYVTGQTIHVNGG 241 (245)
T ss_pred CHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence 79999999988875432 2453 555543
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.4e-08 Score=75.25 Aligned_cols=151 Identities=21% Similarity=0.168 Sum_probs=91.3
Q ss_pred CeEEEeecCCCC-------CCCCCchhhhHHHHHHHHHHHHHH----HHHcCCCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTL-------DDPKDPEKELLIPAVQGTLNVLEA----AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|+|||+|+.... ..........+..|+.+...++++ +++.+.+++|++||.+..++... ...++
T Consensus 85 d~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----~~~~~ 159 (256)
T PRK09186 85 DGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKF-----EIYEG 159 (256)
T ss_pred cEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccc-----hhccc
Confidence 789999975321 011122355677788776666555 44456679999999755433211 11222
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
.+.... ..|+.+|...|.+.+.++.+ .++++++++|+.++++.. ..+........ ...
T Consensus 160 ~~~~~~------~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-------~~~~~~~~~~~------~~~ 220 (256)
T PRK09186 160 TSMTSP------VEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-------EAFLNAYKKCC------NGK 220 (256)
T ss_pred cccCCc------chhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-------HHHHHHHHhcC------Ccc
Confidence 222211 36999999999998877664 489999999998875421 11122211111 122
Q ss_pred CceeHHhHHHHHHHhhcCCC--CCce-EEEec
Q 026820 147 GAVHVKDVAKAQVLLFETSA--ASGR-YLCTN 175 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 175 (232)
.+++++|++++++.++.... ..|. +.+.+
T Consensus 221 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~ 252 (256)
T PRK09186 221 GMLDPDDICGTLVFLLSDQSKYITGQNIIVDD 252 (256)
T ss_pred CCCCHHHhhhhHhheeccccccccCceEEecC
Confidence 57899999999999997543 3454 34443
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=6.3e-07 Score=70.85 Aligned_cols=96 Identities=16% Similarity=0.101 Sum_probs=69.8
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH---cCCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK---FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||...... ..+.....+++|+.++.++++++.. .+..++|++||.+...+.+.
T Consensus 74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 139 (274)
T PRK05693 74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPF-------------- 139 (274)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCC--------------
Confidence 79999999754311 1233456788999999999988743 23357999998744332111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCC
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGP 117 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~ 117 (232)
...|+.+|...|.+.+.++.+ .|+++++++||.+..+
T Consensus 140 -------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 140 -------AGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred -------ccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence 148999999999998877654 5899999999999654
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.9e-07 Score=72.39 Aligned_cols=145 Identities=16% Similarity=0.131 Sum_probs=91.6
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||++|.... ....+..+..+..|+.++.++.+++ ++.+..++|++||.....+...
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~------------- 148 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFG------------- 148 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCC-------------
Confidence 789999997643 1112234567789999988886554 5555679999998743211111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAE---KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
. ..|+.+|...+.+++.++. ..++++++++|+.+.++..... . ......+....+ ...+.
T Consensus 149 --~------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~-~--~~~~~~~~~~~~------~~~~~ 211 (245)
T PRK12824 149 --Q------TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQM-G--PEVLQSIVNQIP------MKRLG 211 (245)
T ss_pred --C------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc-C--HHHHHHHHhcCC------CCCCC
Confidence 1 3799999999988888765 3489999999999987643321 1 112222222211 12355
Q ss_pred eHHhHHHHHHHhhcCC--CCCc-eEEEec
Q 026820 150 HVKDVAKAQVLLFETS--AASG-RYLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 175 (232)
..+|+++++..++... ...| .+.+++
T Consensus 212 ~~~~va~~~~~l~~~~~~~~~G~~~~~~~ 240 (245)
T PRK12824 212 TPEEIAAAVAFLVSEAAGFITGETISING 240 (245)
T ss_pred CHHHHHHHHHHHcCccccCccCcEEEECC
Confidence 7899999998888543 2345 344443
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.5e-07 Score=72.64 Aligned_cols=136 Identities=15% Similarity=0.099 Sum_probs=90.3
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ....+.....+..|+.++.++++++.. .+..++|++||.....+...
T Consensus 69 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------ 136 (235)
T PRK06550 69 DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGG------------ 136 (235)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC------------
Confidence 789999996421 112223467789999999999988753 34458999999754332211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+. |+++++++|+.+.++....... .......+.... ....+
T Consensus 137 ---------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~~~ 200 (235)
T PRK06550 137 ---------GAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE-PGGLADWVARET------PIKRW 200 (235)
T ss_pred ---------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC-chHHHHHHhccC------CcCCC
Confidence 1379999999999888877654 8999999999997764322211 111112222211 12236
Q ss_pred eeHHhHHHHHHHhhcC
Q 026820 149 VHVKDVAKAQVLLFET 164 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~ 164 (232)
...+|+|++++.++..
T Consensus 201 ~~~~~~a~~~~~l~s~ 216 (235)
T PRK06550 201 AEPEEVAELTLFLASG 216 (235)
T ss_pred CCHHHHHHHHHHHcCh
Confidence 7789999999999854
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.81 E-value=8.5e-08 Score=74.65 Aligned_cols=138 Identities=17% Similarity=0.152 Sum_probs=88.6
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHH----HHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQ----GTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~----~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||....... .++....++.|+. ++++++.++.+.+.+++|++||.....+...
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~------------- 147 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPD------------- 147 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCC-------------
Confidence 789999998654111 1123456678887 7788888888777779999999744332211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc-----CCcEEEEcCCCeeCCCCCCCCCh--hHHHHHHHHhCCCCccCCcc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN-----GTDVVAIHPATSLGPFPQPYVNA--SGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~i~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 145 (232)
...|+.+|...+.+.+.++.+. ++++++++|+.+.++........ .......+.++.+ .
T Consensus 148 --------~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~ 213 (251)
T PRK07069 148 --------YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP------L 213 (251)
T ss_pred --------CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC------C
Confidence 1379999999999988876542 48889999999887653211000 0111111112211 1
Q ss_pred cCceeHHhHHHHHHHhhcCC
Q 026820 146 LGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~ 165 (232)
..+.+++|++++++.++..+
T Consensus 214 ~~~~~~~~va~~~~~l~~~~ 233 (251)
T PRK07069 214 GRLGEPDDVAHAVLYLASDE 233 (251)
T ss_pred CCCcCHHHHHHHHHHHcCcc
Confidence 23567999999999977543
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.4e-07 Score=73.76 Aligned_cols=146 Identities=17% Similarity=0.134 Sum_probs=93.2
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc----C-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF----G-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||..... ...+.....+.+|+.+...+++++... + -.++|++||.....+.
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~-------------- 147 (256)
T PRK12743 82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPL-------------- 147 (256)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCC--------------
Confidence 7899999986531 112234677899999999999887543 1 2489999986331111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
.+. ..|+.+|...+.+++.++.+ .+++++.++||.+.++...... .........+.+ . ..+
T Consensus 148 -~~~------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~--~----~~~ 211 (256)
T PRK12743 148 -PGA------SAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD---SDVKPDSRPGIP--L----GRP 211 (256)
T ss_pred -CCc------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC---hHHHHHHHhcCC--C----CCC
Confidence 111 48999999999998887764 4799999999999876432111 111111111111 1 124
Q ss_pred eeHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
.+.+|++.++..++.... ..|. +.++|.
T Consensus 212 ~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg 242 (256)
T PRK12743 212 GDTHEIASLVAWLCSEGASYTTGQSLIVDGG 242 (256)
T ss_pred CCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence 588999999998886432 3454 455543
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.2e-07 Score=73.63 Aligned_cols=135 Identities=13% Similarity=0.082 Sum_probs=88.3
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||.... .......+..+++|+.++..+.+++ .+.+..++|++||.....+...
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------- 149 (246)
T PRK12938 83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG------------- 149 (246)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCC-------------
Confidence 789999998542 1122334677899999977766554 4456679999999744322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+.+.++++ .++++++++|+.+.++.... .....+..+....+ ...+.
T Consensus 150 --------~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~---~~~~~~~~~~~~~~------~~~~~ 212 (246)
T PRK12938 150 --------QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA---IRPDVLEKIVATIP------VRRLG 212 (246)
T ss_pred --------ChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh---cChHHHHHHHhcCC------ccCCc
Confidence 147999999999988877654 48999999999987664321 11222222222211 22356
Q ss_pred eHHhHHHHHHHhhcCC
Q 026820 150 HVKDVAKAQVLLFETS 165 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~ 165 (232)
..+|++.+++.++...
T Consensus 213 ~~~~v~~~~~~l~~~~ 228 (246)
T PRK12938 213 SPDEIGSIVAWLASEE 228 (246)
T ss_pred CHHHHHHHHHHHcCcc
Confidence 7899999999988543
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=2e-07 Score=74.57 Aligned_cols=147 Identities=14% Similarity=0.104 Sum_probs=95.0
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|++||+||.... .....+....+++|+.++..+++++... .-.++|++||..+..+.+.
T Consensus 130 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~-------------- 195 (294)
T PRK07985 130 DIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPH-------------- 195 (294)
T ss_pred CEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCC--------------
Confidence 789999986421 1122334677899999999999998653 1248999999744221111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
...|+.+|...+.+++.++.+ .|+++.+++||.+.++..... .........+....+ ...+..
T Consensus 196 -------~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~------~~r~~~ 261 (294)
T PRK07985 196 -------LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISG-GQTQDKIPQFGQQTP------MKRAGQ 261 (294)
T ss_pred -------cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccccccc-CCCHHHHHHHhccCC------CCCCCC
Confidence 137999999999999888765 489999999999998753211 111111222211111 113567
Q ss_pred HHhHHHHHHHhhcCCC--CCce-EEEec
Q 026820 151 VKDVAKAQVLLFETSA--ASGR-YLCTN 175 (232)
Q Consensus 151 v~D~a~~~~~~~~~~~--~~~~-~~~~~ 175 (232)
.+|+++++..++.... .+|. +.+.|
T Consensus 262 pedva~~~~fL~s~~~~~itG~~i~vdg 289 (294)
T PRK07985 262 PAELAPVYVYLASQESSYVTAEVHGVCG 289 (294)
T ss_pred HHHHHHHHHhhhChhcCCccccEEeeCC
Confidence 9999999999986532 3453 44443
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.7e-07 Score=75.86 Aligned_cols=119 Identities=9% Similarity=-0.066 Sum_probs=73.7
Q ss_pred CeEEEeecCCCCC-----CCCCchhhhHHHHHHHHHHHHHHHHH----cC--CCEEEEecccceeccCCCCC--CCCccC
Q 026820 1 MGVFHLASPNTLD-----DPKDPEKELLIPAVQGTLNVLEAAKK----FG--VRRVVLTSSISSIVPNPNWP--QGKVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~~i~~Ss~~~~~~~~~~~--~~~~~~ 67 (232)
|+|||+||..... ...+..+..+.+|+.++.++++++.. .+ ..++|++||.+..++..... .....+
T Consensus 85 D~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~ 164 (322)
T PRK07453 85 DALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPAD 164 (322)
T ss_pred cEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccc
Confidence 7899999975421 12223467789999999999888754 22 24899999975433211100 000001
Q ss_pred CCC-------CCCc-----ccccccchhHHHHHHHHHHHHHHHHHHc----CCcEEEEcCCCeeCCCC
Q 026820 68 ETS-------WTDL-----DFCKSHKIWYSMSKTLAEKAAWEFAEKN----GTDVVAIHPATSLGPFP 119 (232)
Q Consensus 68 E~~-------~~~~-----~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~i~G~~~ 119 (232)
.++ +..+ ..+..+...|+.||...+.+...++++. |+.++++|||.|++.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~ 232 (322)
T PRK07453 165 LGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPL 232 (322)
T ss_pred hhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcc
Confidence 000 0000 0011223589999999988888877654 79999999999987543
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.3e-07 Score=71.64 Aligned_cols=147 Identities=18% Similarity=0.108 Sum_probs=95.3
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||++|..... ...+..++.+..|+.++.++++++.+ .+..++|++||.....+.+.
T Consensus 90 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------------- 156 (256)
T PRK06124 90 DILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAG------------- 156 (256)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCC-------------
Confidence 6899999975431 11223456789999999999977643 45678999999744322211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+++.++.+ .++.+.+++|+.+.++...... ....+...+.... ....++
T Consensus 157 --------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~-~~~~~~~~~~~~~------~~~~~~ 221 (256)
T PRK06124 157 --------DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMA-ADPAVGPWLAQRT------PLGRWG 221 (256)
T ss_pred --------ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhc-cChHHHHHHHhcC------CCCCCC
Confidence 148999999999998887654 3899999999999877532211 1111111111111 112478
Q ss_pred eHHhHHHHHHHhhcCCC--CCceE-EEec
Q 026820 150 HVKDVAKAQVLLFETSA--ASGRY-LCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~~~-~~~~ 175 (232)
+++|++.+++.++.... .+|.+ .+.+
T Consensus 222 ~~~~~a~~~~~l~~~~~~~~~G~~i~~dg 250 (256)
T PRK06124 222 RPEEIAGAAVFLASPAASYVNGHVLAVDG 250 (256)
T ss_pred CHHHHHHHHHHHcCcccCCcCCCEEEECC
Confidence 89999999999997643 34644 4443
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.3e-07 Score=71.75 Aligned_cols=128 Identities=14% Similarity=0.053 Sum_probs=88.6
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||++|...... ...+.++.++.|+.++.++++++. +.+.+++|++||...+++...
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~------------- 152 (239)
T PRK07666 86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAV------------- 152 (239)
T ss_pred cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCC-------------
Confidence 78999999865311 112235678999999999988875 345578999999755443221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.++..++.+ .+++++++|||.+..+..... ....+ ....++
T Consensus 153 --------~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~---------~~~~~-------~~~~~~ 208 (239)
T PRK07666 153 --------TSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL---------GLTDG-------NPDKVM 208 (239)
T ss_pred --------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc---------ccccc-------CCCCCC
Confidence 137999999999998877643 489999999999876532110 00001 112457
Q ss_pred eHHhHHHHHHHhhcCC
Q 026820 150 HVKDVAKAQVLLFETS 165 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~ 165 (232)
..+|+++.+..++..+
T Consensus 209 ~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 209 QPEDLAEFIVAQLKLN 224 (239)
T ss_pred CHHHHHHHHHHHHhCC
Confidence 8999999999999765
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.2e-07 Score=75.10 Aligned_cols=150 Identities=16% Similarity=0.084 Sum_probs=94.4
Q ss_pred CeEEEeecCCCCC------CCCCchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLD------DPKDPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||..... ...++....++.|+.++.++++++... +..++|++||.+..++....
T Consensus 96 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~---------- 165 (280)
T PLN02253 96 DIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGP---------- 165 (280)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCC----------
Confidence 7899999975321 112234678999999999999887532 33478999987554443221
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCC---ChhHHHHH---HHHhCCCCcc
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYV---NASGAVLQ---RLLQGSKDTQ 141 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~---~~~~~~~~---~~~~~~~~~~ 141 (232)
..|+.+|...|.+.+.++.+. ++.+.+++|+.+..+...... ......+. .......
T Consensus 166 -----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 231 (280)
T PLN02253 166 -----------HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNA--- 231 (280)
T ss_pred -----------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCC---
Confidence 379999999999999887653 899999999999765321100 00011111 1111110
Q ss_pred CCcccCceeHHhHHHHHHHhhcCCC--CCce-EEEec
Q 026820 142 EHYWLGAVHVKDVAKAQVLLFETSA--ASGR-YLCTN 175 (232)
Q Consensus 142 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 175 (232)
......++++|+++++..++.... ..|. +.++|
T Consensus 232 -~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdg 267 (280)
T PLN02253 232 -NLKGVELTVDDVANAVLFLASDEARYISGLNLMIDG 267 (280)
T ss_pred -CCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECC
Confidence 001235789999999999986532 3453 45544
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.76 E-value=9.4e-07 Score=69.09 Aligned_cols=147 Identities=17% Similarity=0.108 Sum_probs=94.1
Q ss_pred CeEEEeecCCCCCCCC---CchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK---DPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~---~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||........ +.....+..|+.++.++++++.. .+..++|++||.....+..
T Consensus 90 d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------- 154 (255)
T PRK06113 90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI--------------- 154 (255)
T ss_pred CEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCC---------------
Confidence 7899999976542112 23345589999999999999863 3335899999974321111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
+. ..|+.+|...+.+++.++.+ .++.+.++.||.+-.+..... .......+.....+ ...+..
T Consensus 155 ~~------~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~------~~~~~~ 220 (255)
T PRK06113 155 NM------TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTP------IRRLGQ 220 (255)
T ss_pred Cc------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc--cCHHHHHHHHhcCC------CCCCcC
Confidence 11 37999999999999988754 478999999998865432211 11122222222211 123568
Q ss_pred HHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 151 VKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 151 v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
.+|+++++..++.... .+|. +.+++.
T Consensus 221 ~~d~a~~~~~l~~~~~~~~~G~~i~~~gg 249 (255)
T PRK06113 221 PQDIANAALFLCSPAASWVSGQILTVSGG 249 (255)
T ss_pred HHHHHHHHHHHcCccccCccCCEEEECCC
Confidence 9999999999986432 3453 455543
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.3e-07 Score=73.36 Aligned_cols=145 Identities=16% Similarity=0.095 Sum_probs=93.4
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||++|..... ...+..+..+..|+.++.++++++.. .+.+++|++||...+++....
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~------------ 152 (247)
T PRK05565 85 DILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCE------------ 152 (247)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCc------------
Confidence 7899999986431 11223467788999998888877653 345689999997565543221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
..|+.+|...+.+++.++++ .|++++++||+.+..+..... .......+... . ....+.
T Consensus 153 ---------~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~---~~~~~~~~~~~----~--~~~~~~ 214 (247)
T PRK05565 153 ---------VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSF---SEEDKEGLAEE----I--PLGRLG 214 (247)
T ss_pred ---------cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcccccc---ChHHHHHHHhc----C--CCCCCC
Confidence 37999999998888877654 489999999999865432211 11111111111 1 122466
Q ss_pred eHHhHHHHHHHhhcCCC--CCceE-EEec
Q 026820 150 HVKDVAKAQVLLFETSA--ASGRY-LCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~~~-~~~~ 175 (232)
..+|+++++..++.... .+|.+ .+.+
T Consensus 215 ~~~~va~~~~~l~~~~~~~~~g~~~~~~~ 243 (247)
T PRK05565 215 KPEEIAKVVLFLASDDASYITGQIITVDG 243 (247)
T ss_pred CHHHHHHHHHHHcCCccCCccCcEEEecC
Confidence 89999999999886543 34543 4443
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.5e-07 Score=73.05 Aligned_cols=127 Identities=18% Similarity=0.068 Sum_probs=85.6
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||........ ......+++|+.++.++++++ .+.+..++|++||.+...+.+.
T Consensus 80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 146 (273)
T PRK07825 80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPG------------- 146 (273)
T ss_pred CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCC-------------
Confidence 7899999986541111 123567789998888877665 3456679999999744222111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.+..+ .|+++++++|+.+-.+.... .. ......++
T Consensus 147 --------~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~---------------~~---~~~~~~~~ 200 (273)
T PRK07825 147 --------MATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAG---------------TG---GAKGFKNV 200 (273)
T ss_pred --------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcc---------------cc---cccCCCCC
Confidence 147999999888877766543 48999999999874332110 00 01123578
Q ss_pred eHHhHHHHHHHhhcCCC
Q 026820 150 HVKDVAKAQVLLFETSA 166 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~ 166 (232)
..+|+|+.++.++.++.
T Consensus 201 ~~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 201 EPEDVAAAIVGTVAKPR 217 (273)
T ss_pred CHHHHHHHHHHHHhCCC
Confidence 99999999999997654
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.9e-07 Score=75.41 Aligned_cols=153 Identities=16% Similarity=0.069 Sum_probs=88.9
Q ss_pred CeEEEeecCCCC--CCCCCchhhhHHHHHHHHHHHHHH----HHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTL--DDPKDPEKELLIPAVQGTLNVLEA----AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~--~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||.... .......+..+.+|+.++..++++ +.+.+..++|++||.+...+..... + .....+.
T Consensus 101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~-~--~~~~~~~-- 175 (315)
T PRK06196 101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWD-D--PHFTRGY-- 175 (315)
T ss_pred CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCcc-c--cCccCCC--
Confidence 789999997543 112233467789999997666654 4455546899999974322211100 0 0111111
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
.....|+.||...+.+.+.+++. .|++++++|||.+.++..... .................. ...+...
T Consensus 176 ----~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~ 247 (315)
T PRK06196 176 ----DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHL-PREEQVALGWVDEHGNPI---DPGFKTP 247 (315)
T ss_pred ----ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccC-Chhhhhhhhhhhhhhhhh---hhhcCCH
Confidence 12257999999999998887654 489999999999988753221 110000000000000000 0024568
Q ss_pred HhHHHHHHHhhcCCC
Q 026820 152 KDVAKAQVLLFETSA 166 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~ 166 (232)
+|.|..++.++..+.
T Consensus 248 ~~~a~~~~~l~~~~~ 262 (315)
T PRK06196 248 AQGAATQVWAATSPQ 262 (315)
T ss_pred hHHHHHHHHHhcCCc
Confidence 999999999886543
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.6e-07 Score=71.36 Aligned_cols=142 Identities=13% Similarity=0.076 Sum_probs=92.2
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... .........++.|+.++..+++++.. .+..++|++||....++...
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------- 154 (254)
T PRK08085 88 DVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDT------------- 154 (254)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCC-------------
Confidence 7899999975431 11223456789999999888887654 34468999999744222111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+++.++.+ .|+++.+++||.+..+...... ....+ ........ + ...+.
T Consensus 155 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~-~~~~~-~~~~~~~~---p--~~~~~ 219 (254)
T PRK08085 155 --------ITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALV-EDEAF-TAWLCKRT---P--AARWG 219 (254)
T ss_pred --------CcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhc-cCHHH-HHHHHhcC---C--CCCCc
Confidence 147999999999999998765 3899999999999876432211 01111 11111111 1 12467
Q ss_pred eHHhHHHHHHHhhcC--CCCCce
Q 026820 150 HVKDVAKAQVLLFET--SAASGR 170 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~--~~~~~~ 170 (232)
..+|+++++..++.. ...+|.
T Consensus 220 ~~~~va~~~~~l~~~~~~~i~G~ 242 (254)
T PRK08085 220 DPQELIGAAVFLSSKASDFVNGH 242 (254)
T ss_pred CHHHHHHHHHHHhCccccCCcCC
Confidence 899999999998864 334553
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=3e-07 Score=72.02 Aligned_cols=153 Identities=13% Similarity=0.129 Sum_probs=91.7
Q ss_pred CeEEEeecCCCC------CCCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL------DDPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||.... ....+.....+++|+.++.++++++ .+.+..++|++||.....+ ..+
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~---------~~~-- 147 (260)
T PRK06523 79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP---------LPE-- 147 (260)
T ss_pred CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC---------CCC--
Confidence 789999996421 1122335667889999998887665 3445568999999733111 000
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCC--------hhHHHHHHHHhCCCC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVN--------ASGAVLQRLLQGSKD 139 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~--------~~~~~~~~~~~~~~~ 139 (232)
. ...|+.+|...|.+++.++.+ .|+++.+++||.+.++....... ........+.....
T Consensus 148 ---~------~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 217 (260)
T PRK06523 148 ---S------TTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLG- 217 (260)
T ss_pred ---C------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhc-
Confidence 1 148999999999998888754 48999999999998764211000 00011111110000
Q ss_pred ccCCcccCceeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 140 TQEHYWLGAVHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 140 ~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
..+ ...+...+|+++++..++... ..+| .+.++|.
T Consensus 218 ~~p--~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg 255 (260)
T PRK06523 218 GIP--LGRPAEPEEVAELIAFLASDRAASITGTEYVIDGG 255 (260)
T ss_pred cCc--cCCCCCHHHHHHHHHHHhCcccccccCceEEecCC
Confidence 000 113557899999999998653 3445 3556543
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.1e-07 Score=71.99 Aligned_cols=133 Identities=21% Similarity=0.107 Sum_probs=88.9
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+..|+.++.++++++.. .+..++|++||...+++....
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------------ 146 (260)
T PRK08267 79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGL------------ 146 (260)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCc------------
Confidence 78999999865311 1223467889999999999888743 344689999998665553321
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
..|+.+|...+.+...++.+ .++++++++|+.+-.+...... .......... ..-.+
T Consensus 147 ---------~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~---~~~~~~~~~~--------~~~~~ 206 (260)
T PRK08267 147 ---------AVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS---NEVDAGSTKR--------LGVRL 206 (260)
T ss_pred ---------hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccccc---chhhhhhHhh--------ccCCC
Confidence 47999999999998888654 4899999999998654322100 0000000100 11235
Q ss_pred eHHhHHHHHHHhhcCC
Q 026820 150 HVKDVAKAQVLLFETS 165 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~ 165 (232)
..+|++++++.++...
T Consensus 207 ~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 207 TPEDVAEAVWAAVQHP 222 (260)
T ss_pred CHHHHHHHHHHHHhCC
Confidence 6799999999998654
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=8.6e-07 Score=69.17 Aligned_cols=147 Identities=15% Similarity=0.030 Sum_probs=92.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH-----cCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK-----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~-----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... .....+..++.|+.++..+++++.. .+..++|++||.....+.+.
T Consensus 77 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------------ 144 (252)
T PRK07856 77 DVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPG------------ 144 (252)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCC------------
Confidence 78999999754311 1122357789999999999998754 13358999999744322111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
.+.|+.+|...|.+++.++.+. .+.+.+++||.+..+....... .......+....+ ...+.
T Consensus 145 ---------~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~ 208 (252)
T PRK07856 145 ---------TAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYG-DAEGIAAVAATVP------LGRLA 208 (252)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhcc-CHHHHHHHhhcCC------CCCCc
Confidence 1489999999999999988754 3788899999886553211100 0111111211111 12356
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
..+|++++++.++... ..+|. +.+.+
T Consensus 209 ~p~~va~~~~~L~~~~~~~i~G~~i~vdg 237 (252)
T PRK07856 209 TPADIAWACLFLASDLASYVSGANLEVHG 237 (252)
T ss_pred CHHHHHHHHHHHcCcccCCccCCEEEECC
Confidence 7899999999988653 23454 34443
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=3e-07 Score=71.86 Aligned_cols=138 Identities=17% Similarity=0.115 Sum_probs=86.4
Q ss_pred CeEEEeecCCCCC------CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLD------DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||..... .........++.|+.++..+++.+. +.+..++|++||...+++....
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~---------- 150 (255)
T PRK06057 81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATS---------- 150 (255)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCC----------
Confidence 7899999975421 1112246778899999888777654 3444589999987554443210
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAE---KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
. ..|+.+|...+.+.+.++. ..++.++++|||.+.++..............+.... .+ ...
T Consensus 151 ----~------~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~----~~--~~~ 214 (255)
T PRK06057 151 ----Q------ISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVH----VP--MGR 214 (255)
T ss_pred ----C------cchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhc----CC--CCC
Confidence 1 3799999888777776543 348999999999998765322111111111111111 11 125
Q ss_pred ceeHHhHHHHHHHhhcC
Q 026820 148 AVHVKDVAKAQVLLFET 164 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~ 164 (232)
+..++|+++++..++..
T Consensus 215 ~~~~~~~a~~~~~l~~~ 231 (255)
T PRK06057 215 FAEPEEIAAAVAFLASD 231 (255)
T ss_pred CcCHHHHHHHHHHHhCc
Confidence 78899999999887754
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.6e-07 Score=71.87 Aligned_cols=143 Identities=20% Similarity=0.137 Sum_probs=89.6
Q ss_pred CeEEEeecCCCCC-----CCCCchhhhHHHHHHHHHHHHHHHHHc-CC------CEEEEecccceeccCCCCCCCCccCC
Q 026820 1 MGVFHLASPNTLD-----DPKDPEKELLIPAVQGTLNVLEAAKKF-GV------RRVVLTSSISSIVPNPNWPQGKVIDE 68 (232)
Q Consensus 1 D~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~------~~~i~~Ss~~~~~~~~~~~~~~~~~E 68 (232)
|+|||+||..... ....+....+.+|+.++..+++++.+. .. .++|++||.+..++....
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~-------- 153 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNE-------- 153 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCC--------
Confidence 7899999975431 111223566889999998887654432 21 359999997555443210
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcc
Q 026820 69 TSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (232)
. ..|+.+|...+.+...++.+. +++++++|||.+..+..... . ............ + .
T Consensus 154 ------~------~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~-~-~~~~~~~~~~~~----~--~ 213 (248)
T PRK06947 154 ------Y------VDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG-G-QPGRAARLGAQT----P--L 213 (248)
T ss_pred ------C------cccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc-C-CHHHHHHHhhcC----C--C
Confidence 0 369999999999988887654 89999999999987642211 0 111111111111 1 0
Q ss_pred cCceeHHhHHHHHHHhhcCCC--CCceE
Q 026820 146 LGAVHVKDVAKAQVLLFETSA--ASGRY 171 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~~--~~~~~ 171 (232)
.-...++|+++.++.++..+. ..|.+
T Consensus 214 ~~~~~~e~va~~~~~l~~~~~~~~~G~~ 241 (248)
T PRK06947 214 GRAGEADEVAETIVWLLSDAASYVTGAL 241 (248)
T ss_pred CCCcCHHHHHHHHHHHcCccccCcCCce
Confidence 124578999999999887653 34544
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.3e-07 Score=70.97 Aligned_cols=148 Identities=17% Similarity=0.166 Sum_probs=90.6
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||....... .+.....++.|+.++..+++++.+ .+ ..++|++||....++.+.
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------ 148 (256)
T PRK08643 81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPE------------ 148 (256)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCC------------
Confidence 789999987543111 122356788999998877777653 22 248999999755443221
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC-------ChhHHH-HHHHHhCCCCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV-------NASGAV-LQRLLQGSKDT 140 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~-------~~~~~~-~~~~~~~~~~~ 140 (232)
.+.|+.+|...|.+.+.++.+ .|+++++++||.+.++...... .....+ ...+....
T Consensus 149 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 216 (256)
T PRK08643 149 ---------LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDI--- 216 (256)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccC---
Confidence 147999999999998887764 4899999999998765321100 000000 01111110
Q ss_pred cCCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
+ ...+...+|++.++..++... ..+|. +.+.+
T Consensus 217 -~--~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdg 251 (256)
T PRK08643 217 -T--LGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDG 251 (256)
T ss_pred -C--CCCCcCHHHHHHHHHHHhCccccCccCcEEEeCC
Confidence 0 113567899999999988643 34554 34443
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.5e-07 Score=70.38 Aligned_cols=148 Identities=16% Similarity=0.160 Sum_probs=93.2
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..++.|+.++..+++++. +.+..++|++||.+...+....
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~------------ 155 (254)
T PRK06114 88 TLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL------------ 155 (254)
T ss_pred CEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCC------------
Confidence 7899999986531 1122346678899999988777653 3444689999997543332210
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
. ...|+.+|...+.+.+.++.+ .|+++.+++||.+.++..... ........+....+ . .-+.
T Consensus 156 -~------~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~--~~~~~~~~~~~~~p--~----~r~~ 220 (254)
T PRK06114 156 -L------QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP--EMVHQTKLFEEQTP--M----QRMA 220 (254)
T ss_pred -C------cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc--cchHHHHHHHhcCC--C----CCCc
Confidence 0 147999999999998888764 489999999999977643211 11111122222211 1 1255
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
..+|++++++.++... ..+|. ..++|
T Consensus 221 ~~~dva~~~~~l~s~~~~~~tG~~i~~dg 249 (254)
T PRK06114 221 KVDEMVGPAVFLLSDAASFCTGVDLLVDG 249 (254)
T ss_pred CHHHHHHHHHHHcCccccCcCCceEEECc
Confidence 7899999999988642 33453 34444
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=3.3e-07 Score=71.29 Aligned_cols=125 Identities=20% Similarity=0.072 Sum_probs=86.9
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||....... .......+++|+.+..++++++. +.+..++|++||...+++.+.
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------- 149 (248)
T PRK08251 83 DRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPG------------- 149 (248)
T ss_pred CEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCC-------------
Confidence 789999998654111 12235678899999998888764 345678999999755443221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
+. ..|+.+|...+.+...+..+ .++++++++|+.+.++..... .. ....+
T Consensus 150 -~~------~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~------------~~--------~~~~~ 202 (248)
T PRK08251 150 -VK------AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA------------KS--------TPFMV 202 (248)
T ss_pred -Cc------ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc------------cc--------CCccC
Confidence 11 47999999999998877754 378999999999865421110 00 11357
Q ss_pred eHHhHHHHHHHhhcCC
Q 026820 150 HVKDVAKAQVLLFETS 165 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~ 165 (232)
..+|+|+.+...+++.
T Consensus 203 ~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 203 DTETGVKALVKAIEKE 218 (248)
T ss_pred CHHHHHHHHHHHHhcC
Confidence 7999999999988654
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.1e-07 Score=74.48 Aligned_cols=125 Identities=16% Similarity=0.054 Sum_probs=87.0
Q ss_pred CeEEEeecCCCCC-----CCCCchhhhHHHHHHHHHHHHH----HHHHcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD-----DPKDPEKELLIPAVQGTLNVLE----AAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||..... .........+++|+.++.++++ ++++.+..++|++||...+++.+.
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~------------ 147 (257)
T PRK07024 80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPG------------ 147 (257)
T ss_pred CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCC------------
Confidence 7999999976431 1113356778999999999877 445555678999999755443221
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAE---KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...|.+.+.+.. ..+++++++||+.+.++..... . ++ ...+
T Consensus 148 ---------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------~----~~--~~~~ 199 (257)
T PRK07024 148 ---------AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-------------P----YP--MPFL 199 (257)
T ss_pred ---------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-------------C----CC--CCCc
Confidence 13799999999999888763 4589999999999976532110 0 00 0013
Q ss_pred eeHHhHHHHHHHhhcCC
Q 026820 149 VHVKDVAKAQVLLFETS 165 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~ 165 (232)
+..+|+++.+..++.+.
T Consensus 200 ~~~~~~a~~~~~~l~~~ 216 (257)
T PRK07024 200 MDADRFAARAARAIARG 216 (257)
T ss_pred cCHHHHHHHHHHHHhCC
Confidence 57999999999988654
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.1e-07 Score=72.17 Aligned_cols=136 Identities=18% Similarity=0.111 Sum_probs=88.4
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||..... ......+..++.|+.++.++++++.+. ...++|++||.+...+.+
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~---------------- 148 (245)
T PRK12937 85 DVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLP---------------- 148 (245)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCC----------------
Confidence 7899999986431 112234567789999999999888653 224899999863311111
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
..+.|+.+|...|.+++.++.+ .++.+++++|+.+-.+..... .....+..+....+ ..-+.++
T Consensus 149 -----~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~------~~~~~~~ 215 (245)
T PRK12937 149 -----GYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG--KSAEQIDQLAGLAP------LERLGTP 215 (245)
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc--CCHHHHHHHHhcCC------CCCCCCH
Confidence 0147999999999999887654 378999999998765432111 11222333332221 1134578
Q ss_pred HhHHHHHHHhhcCC
Q 026820 152 KDVAKAQVLLFETS 165 (232)
Q Consensus 152 ~D~a~~~~~~~~~~ 165 (232)
+|+++++..++...
T Consensus 216 ~d~a~~~~~l~~~~ 229 (245)
T PRK12937 216 EEIAAAVAFLAGPD 229 (245)
T ss_pred HHHHHHHHHHcCcc
Confidence 99999999988653
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.4e-07 Score=71.64 Aligned_cols=134 Identities=17% Similarity=0.101 Sum_probs=89.4
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH-----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK-----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||++|..... ....+....+..|+.++.++++++. +.+..++|++||.+.+++.+..
T Consensus 78 ~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~----------- 146 (239)
T TIGR01831 78 YGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQ----------- 146 (239)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCC-----------
Confidence 6899999975431 1223456788999999999988752 2344589999997665543221
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
..|+.+|...+.+.+.++.+ .|+.++.++|+.+.++.... ............+ ...+
T Consensus 147 ----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~------~~~~ 206 (239)
T TIGR01831 147 ----------VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE----VEHDLDEALKTVP------MNRM 206 (239)
T ss_pred ----------cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh----hhHHHHHHHhcCC------CCCC
Confidence 37999999998888877654 48999999999987654321 1111122222111 1135
Q ss_pred eeHHhHHHHHHHhhcCC
Q 026820 149 VHVKDVAKAQVLLFETS 165 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~ 165 (232)
...+|+++++..++...
T Consensus 207 ~~~~~va~~~~~l~~~~ 223 (239)
T TIGR01831 207 GQPAEVASLAGFLMSDG 223 (239)
T ss_pred CCHHHHHHHHHHHcCch
Confidence 57899999999998653
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.4e-07 Score=70.07 Aligned_cols=136 Identities=15% Similarity=0.142 Sum_probs=89.7
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||.... ....+.....+.+|+.++.++++++. +.+..++|++||.+...+...
T Consensus 90 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~------------- 156 (257)
T PRK09242 90 HILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRS------------- 156 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCC-------------
Confidence 789999997432 11223446678999999999988874 344568999999744221111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
.+.|+.+|...+.+++.++.+ .+++++.++||.+.++...... ........+....+. .-+.
T Consensus 157 --------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~-~~~~~~~~~~~~~~~------~~~~ 221 (257)
T PRK09242 157 --------GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPL-SDPDYYEQVIERTPM------RRVG 221 (257)
T ss_pred --------CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccccccc-CChHHHHHHHhcCCC------CCCc
Confidence 147999999999999987654 4899999999999876533211 112222222222211 1244
Q ss_pred eHHhHHHHHHHhhcC
Q 026820 150 HVKDVAKAQVLLFET 164 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~ 164 (232)
..+|++.++..++..
T Consensus 222 ~~~~va~~~~~l~~~ 236 (257)
T PRK09242 222 EPEEVAAAVAFLCMP 236 (257)
T ss_pred CHHHHHHHHHHHhCc
Confidence 689999999998864
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=3.9e-07 Score=70.33 Aligned_cols=135 Identities=12% Similarity=0.002 Sum_probs=87.4
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||..... ......+..++.|+.++..+++++... ...++|++||..... . +..+
T Consensus 77 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~---~-----------~~~~ 142 (237)
T PRK12742 77 DILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR---M-----------PVAG 142 (237)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc---C-----------CCCC
Confidence 7899999986431 112234678899999999998776543 235899999863210 0 0111
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
. ..|+.+|...|.+++.++.+ .++.+++++||.+..+..... .. ....+....+ ...+...
T Consensus 143 ~------~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~-~~---~~~~~~~~~~------~~~~~~p 206 (237)
T PRK12742 143 M------AAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPAN-GP---MKDMMHSFMA------IKRHGRP 206 (237)
T ss_pred C------cchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc-cH---HHHHHHhcCC------CCCCCCH
Confidence 1 48999999999999887764 479999999999965432211 11 1111111111 1135678
Q ss_pred HhHHHHHHHhhcCC
Q 026820 152 KDVAKAQVLLFETS 165 (232)
Q Consensus 152 ~D~a~~~~~~~~~~ 165 (232)
+|+++++..++...
T Consensus 207 ~~~a~~~~~l~s~~ 220 (237)
T PRK12742 207 EEVAGMVAWLAGPE 220 (237)
T ss_pred HHHHHHHHHHcCcc
Confidence 99999999988653
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=5e-07 Score=71.05 Aligned_cols=148 Identities=14% Similarity=0.051 Sum_probs=93.9
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+.....++.|+.+...+++++. +.+..++|++||....++...
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 155 (265)
T PRK07097 89 DILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRET------------- 155 (265)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCC-------------
Confidence 7899999986541 1222345667899998888777764 345568999999754433221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCC-----hhHHHHHHHHhCCCCccCCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVN-----ASGAVLQRLLQGSKDTQEHY 144 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 144 (232)
. ..|+.+|...+.+++.++++. |+.++.++||.+..+....... ....+...+....+
T Consensus 156 --~------~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 221 (265)
T PRK07097 156 --V------SAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP------ 221 (265)
T ss_pred --C------ccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC------
Confidence 1 479999999999999988764 8999999999998764321000 00011111111110
Q ss_pred ccCceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 145 WLGAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 145 ~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
...+...+|++..+..++... ...|. ..+.+
T Consensus 222 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g 255 (265)
T PRK07097 222 AARWGDPEDLAGPAVFLASDASNFVNGHILYVDG 255 (265)
T ss_pred ccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECC
Confidence 113567899999999998753 33453 34443
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.7e-07 Score=72.21 Aligned_cols=150 Identities=13% Similarity=0.111 Sum_probs=90.8
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEe-cccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLT-SSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~-Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||.... ..........+++|+.++..+++++... ...+++++ ||....+..
T Consensus 91 d~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~---------------- 154 (257)
T PRK12744 91 DIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTP---------------- 154 (257)
T ss_pred CEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCC----------------
Confidence 789999997433 1122234667889999999999998653 12356655 443221110
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
. .+.|+.+|...|.+++.++.+. ++++++++||.+.++...+... . .... .........+.....+.+
T Consensus 155 -~-----~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-~-~~~~-~~~~~~~~~~~~~~~~~~ 225 (257)
T PRK12744 155 -F-----YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-A-EAVA-YHKTAAALSPFSKTGLTD 225 (257)
T ss_pred -C-----cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-c-chhh-cccccccccccccCCCCC
Confidence 0 1479999999999999988764 6999999999997654322111 0 0000 000000001112235789
Q ss_pred HHhHHHHHHHhhcCCC-CCc-eEEEec
Q 026820 151 VKDVAKAQVLLFETSA-ASG-RYLCTN 175 (232)
Q Consensus 151 v~D~a~~~~~~~~~~~-~~~-~~~~~~ 175 (232)
++|+++++..++.... ..| .+++++
T Consensus 226 ~~dva~~~~~l~~~~~~~~g~~~~~~g 252 (257)
T PRK12744 226 IEDIVPFIRFLVTDGWWITGQTILING 252 (257)
T ss_pred HHHHHHHHHHhhcccceeecceEeecC
Confidence 9999999999997431 234 355543
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.2e-06 Score=68.48 Aligned_cols=151 Identities=15% Similarity=0.107 Sum_probs=90.2
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHH----HHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLE----AAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... .........+++|+.++..+++ .+.+.+..++|++||... ++... +
T Consensus 81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~-~~~~~--------~---- 147 (255)
T PRK06463 81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAG-IGTAA--------E---- 147 (255)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHh-CCCCC--------C----
Confidence 7899999985431 1122345678899999655544 444444568999999733 22111 0
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC-ChhHHHHHHHHhCCCCccCCcccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV-NASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
. ...|+.+|...+.+++.++.+ .++++.+++||.+-.+...... ............... ....+
T Consensus 148 -~------~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 215 (255)
T PRK06463 148 -G------TTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKT-----VLKTT 215 (255)
T ss_pred -C------ccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCC-----CcCCC
Confidence 0 147999999999999998764 4899999999988543211100 000001111111110 12235
Q ss_pred eeHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
...+|++++++.++.... .+|. +.+++.
T Consensus 216 ~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg 246 (255)
T PRK06463 216 GKPEDIANIVLFLASDDARYITGQVIVADGG 246 (255)
T ss_pred cCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence 679999999999986543 3453 455543
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=7.1e-07 Score=69.82 Aligned_cols=142 Identities=15% Similarity=0.113 Sum_probs=89.5
Q ss_pred CeEEEeecCCCCC-C---CCCchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD-D---PKDPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~-~---~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... . .....+..+.+|+.++..+++++... +..++|++||... +.. ...
T Consensus 97 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~-~~~--------~~~---- 163 (256)
T PRK12748 97 SILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQS-LGP--------MPD---- 163 (256)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccc-cCC--------CCC----
Confidence 7899999975431 1 11224566899999999999987542 3458999998633 211 111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
. ..|+.+|...|.+++.++.+ .+++++.++||.+..+.... .....+... .+. ..+.
T Consensus 164 --~------~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~------~~~~~~~~~----~~~--~~~~ 223 (256)
T PRK12748 164 --E------LAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE------ELKHHLVPK----FPQ--GRVG 223 (256)
T ss_pred --c------hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh------hHHHhhhcc----CCC--CCCc
Confidence 1 47999999999998887654 48999999999876442111 111111111 111 1234
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
..+|+++++..++... ...|. +++.+
T Consensus 224 ~~~~~a~~~~~l~~~~~~~~~g~~~~~d~ 252 (256)
T PRK12748 224 EPVDAARLIAFLVSEEAKWITGQVIHSEG 252 (256)
T ss_pred CHHHHHHHHHHHhCcccccccCCEEEecC
Confidence 5799999999887653 23454 45543
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.4e-07 Score=71.42 Aligned_cols=149 Identities=19% Similarity=0.135 Sum_probs=91.1
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||..... ......+..++.|+.++..+++++.. .+ ..++|++||....++.+.
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------ 146 (254)
T TIGR02415 79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPI------------ 146 (254)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCC------------
Confidence 7899999985431 11223356788999998877766543 22 258999999755544322
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-----cCC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-----QEH 143 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 143 (232)
.+.|+.+|...|.+++.+..+. ++.+.+++|+.+..+.... ....... ..+.+.. +..
T Consensus 147 ---------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~----~~~~~~~-~~~~~~~~~~~~~~~ 212 (254)
T TIGR02415 147 ---------LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEE----IDEETSE-IAGKPIGEGFEEFSS 212 (254)
T ss_pred ---------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhh----hhhhhhh-cccCchHHHHHHHHh
Confidence 1489999999999998876553 7999999999885442110 0000000 0000000 000
Q ss_pred --cccCceeHHhHHHHHHHhhcCCCC--CceE-EEec
Q 026820 144 --YWLGAVHVKDVAKAQVLLFETSAA--SGRY-LCTN 175 (232)
Q Consensus 144 --~~~~~i~v~D~a~~~~~~~~~~~~--~~~~-~~~~ 175 (232)
....+...+|+++++..++..... .|.+ .+++
T Consensus 213 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~ 249 (254)
T TIGR02415 213 EIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDG 249 (254)
T ss_pred hCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecC
Confidence 012367889999999999976532 3544 4443
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.5e-06 Score=67.78 Aligned_cols=147 Identities=18% Similarity=0.196 Sum_probs=92.1
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ....+..+..++.|+.+...+++++ .+.+..++|++||.....+...
T Consensus 87 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------ 154 (252)
T PRK07035 87 DILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDF------------ 154 (252)
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCC------------
Confidence 789999986432 1112223567889999998888776 3445568999998644222111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
.+.|+.+|...|.+++.++.+ .|++++.+.||.+-.+...... .............+ ...+
T Consensus 155 ---------~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~------~~~~ 218 (252)
T PRK07035 155 ---------QGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALF-KNDAILKQALAHIP------LRRH 218 (252)
T ss_pred ---------CcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCccccccc-CCHHHHHHHHccCC------CCCc
Confidence 147999999999999998765 3899999999988544321111 01112222211111 1235
Q ss_pred eeHHhHHHHHHHhhcCCC--CCce-EEEec
Q 026820 149 VHVKDVAKAQVLLFETSA--ASGR-YLCTN 175 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 175 (232)
...+|+++++..++.... ..|. +.+.|
T Consensus 219 ~~~~~va~~~~~l~~~~~~~~~g~~~~~dg 248 (252)
T PRK07035 219 AEPSEMAGAVLYLASDASSYTTGECLNVDG 248 (252)
T ss_pred CCHHHHHHHHHHHhCccccCccCCEEEeCC
Confidence 678999999999886543 3453 35544
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=7.8e-07 Score=69.89 Aligned_cols=136 Identities=17% Similarity=0.035 Sum_probs=88.3
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH-----cCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK-----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~-----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||..... ...+.....+..|+.++.++++++.. .+..++|++||....++...
T Consensus 89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~------------ 156 (263)
T PRK07814 89 DIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRG------------ 156 (263)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCC------------
Confidence 7899999974431 11233567789999999999999864 34568999999744222111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
.+.|+.+|...|.+++.+..+. ++.++.++|+.+..+.... ......+...+ .+.. ....+.
T Consensus 157 ---------~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~-~~~~~~~~~~~-~~~~-----~~~~~~ 220 (263)
T PRK07814 157 ---------FAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEV-VAANDELRAPM-EKAT-----PLRRLG 220 (263)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhh-ccCCHHHHHHH-HhcC-----CCCCCc
Confidence 1489999999999999887654 5788899998876442110 00011111111 1110 112356
Q ss_pred eHHhHHHHHHHhhcC
Q 026820 150 HVKDVAKAQVLLFET 164 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~ 164 (232)
..+|++++++.++..
T Consensus 221 ~~~~va~~~~~l~~~ 235 (263)
T PRK07814 221 DPEDIAAAAVYLASP 235 (263)
T ss_pred CHHHHHHHHHHHcCc
Confidence 789999999999865
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.8e-07 Score=72.65 Aligned_cols=149 Identities=15% Similarity=0.118 Sum_probs=91.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCC----CCCCc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDET----SWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~----~~~~~ 74 (232)
|+|||+||... ..+.+..+++|+.++..+++++... .-.++|++||.++ ++.... .+..|. .....
T Consensus 50 D~li~nAG~~~----~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~-~~~~~~---~~~~~~~~~~~~~~~ 121 (241)
T PRK12428 50 DALFNIAGVPG----TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAG-AEWPQR---LELHKALAATASFDE 121 (241)
T ss_pred eEEEECCCCCC----CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHh-hccccc---hHHHHhhhccchHHH
Confidence 79999999764 3457889999999999999998753 2258999999844 432110 011110 00000
Q ss_pred ------ccccccchhHHHHHHHHHHHHHHHH-H---HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCc
Q 026820 75 ------DFCKSHKIWYSMSKTLAEKAAWEFA-E---KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHY 144 (232)
Q Consensus 75 ------~~~~~~~~~Y~~sK~~~E~~~~~~~-~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (232)
..+.+..+.|+.+|...+.+.+.++ . ..|+++.+++||.+.++-......... ........ .+
T Consensus 122 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~---~~~~~~~~--~~-- 194 (241)
T PRK12428 122 GAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLG---QERVDSDA--KR-- 194 (241)
T ss_pred HHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhh---hHhhhhcc--cc--
Confidence 0011222589999999999988877 3 458999999999998764221000000 00000000 01
Q ss_pred ccCceeHHhHHHHHHHhhcC
Q 026820 145 WLGAVHVKDVAKAQVLLFET 164 (232)
Q Consensus 145 ~~~~i~v~D~a~~~~~~~~~ 164 (232)
...+...+|+++++..++..
T Consensus 195 ~~~~~~pe~va~~~~~l~s~ 214 (241)
T PRK12428 195 MGRPATADEQAAVLVFLCSD 214 (241)
T ss_pred cCCCCCHHHHHHHHHHHcCh
Confidence 11256789999999998854
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.5e-06 Score=68.91 Aligned_cols=137 Identities=15% Similarity=0.020 Sum_probs=86.8
Q ss_pred CeEEEeecCCCCCC-------------------CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccC
Q 026820 1 MGVFHLASPNTLDD-------------------PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPN 57 (232)
Q Consensus 1 D~Vih~a~~~~~~~-------------------~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~ 57 (232)
|+|||+||...... ........++.|+.++..+++++ .+.+..++|++||.....+.
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~ 168 (278)
T PRK08277 89 DILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPL 168 (278)
T ss_pred CEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCC
Confidence 78999999654311 11234567788999888766554 34444689999997442111
Q ss_pred CCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCC----CChhHHHH
Q 026820 58 PNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPY----VNASGAVL 130 (232)
Q Consensus 58 ~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~----~~~~~~~~ 130 (232)
. . ...|+.+|...|.+++.++.+. ++++.+++||.+..+..... ........
T Consensus 169 ~---------------~------~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~ 227 (278)
T PRK08277 169 T---------------K------VPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERA 227 (278)
T ss_pred C---------------C------CchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHH
Confidence 1 1 1479999999999999887764 89999999999987642110 00011111
Q ss_pred HHHHhCCCCccCCcccCceeHHhHHHHHHHhhcC
Q 026820 131 QRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFET 164 (232)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 164 (232)
..+....+ ..-+...+|++++++.++..
T Consensus 228 ~~~~~~~p------~~r~~~~~dva~~~~~l~s~ 255 (278)
T PRK08277 228 NKILAHTP------MGRFGKPEELLGTLLWLADE 255 (278)
T ss_pred HHHhccCC------ccCCCCHHHHHHHHHHHcCc
Confidence 11211111 12356789999999998865
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.3e-06 Score=68.10 Aligned_cols=146 Identities=16% Similarity=0.115 Sum_probs=92.2
Q ss_pred CeEEEeecCCCC----------CCCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCcc
Q 026820 1 MGVFHLASPNTL----------DDPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVI 66 (232)
Q Consensus 1 D~Vih~a~~~~~----------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~ 66 (232)
|+|||+||.... ....+...+.++.|+.++.++++++.. .+..++|++||... ..+.
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~--~~~~------- 153 (253)
T PRK08642 83 TTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLF--QNPV------- 153 (253)
T ss_pred eEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccc--cCCC-------
Confidence 789999986321 011122356789999999999999853 34468999998522 1110
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCC
Q 026820 67 DETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEH 143 (232)
Q Consensus 67 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (232)
.+. +.|+.+|...|.+++.++++ .++.+..++||.+-.+..... ........+....+
T Consensus 154 ------~~~------~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~--~~~~~~~~~~~~~~----- 214 (253)
T PRK08642 154 ------VPY------HDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA--TPDEVFDLIAATTP----- 214 (253)
T ss_pred ------CCc------cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc--CCHHHHHHHHhcCC-----
Confidence 111 48999999999999998775 378999999998865422111 11112222211111
Q ss_pred cccCceeHHhHHHHHHHhhcCC--CCCc-eEEEec
Q 026820 144 YWLGAVHVKDVAKAQVLLFETS--AASG-RYLCTN 175 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 175 (232)
...+.+.+|+++++..++... ...| .+.++|
T Consensus 215 -~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdg 248 (253)
T PRK08642 215 -LRKVTTPQEFADAVLFFASPWARAVTGQNLVVDG 248 (253)
T ss_pred -cCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCC
Confidence 124788999999999998643 3445 344444
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.5e-06 Score=66.61 Aligned_cols=108 Identities=19% Similarity=0.116 Sum_probs=68.1
Q ss_pred CeEEEeecCCCCC--CCCCchhhhHHHHHHH----HHHHHHHHHHcCCCEEEEecccceec-cCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLD--DPKDPEKELLIPAVQG----TLNVLEAAKKFGVRRVVLTSSISSIV-PNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~--~~~~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~i~~Ss~~~~~-~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||..... ...+..+..+++|+.+ ++.++..+++.+..++|++||.+... +... .++.....
T Consensus 97 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~------~~~~~~~~ 170 (306)
T PRK06197 97 DLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIH------FDDLQWER 170 (306)
T ss_pred CEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCC------ccccCccc
Confidence 7999999976441 1223446778999999 55666666666557999999974322 2111 11111111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEE--EEcCCCeeCC
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVV--AIHPATSLGP 117 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~--ilR~~~i~G~ 117 (232)
+ ......|+.||...+.+...++.+. ++++. .+.||.+..+
T Consensus 171 ~---~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 171 R---YNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred C---CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence 1 1122589999999999998887653 55544 4479888654
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.3e-06 Score=68.62 Aligned_cols=149 Identities=16% Similarity=0.106 Sum_probs=91.9
Q ss_pred CeEEEeecCCCC---CCCCCchhhhHHHHHHHHHHHHHHHHH---cCCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTL---DDPKDPEKELLIPAVQGTLNVLEAAKK---FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||.... ....+.....+++|+.++..+++++.. .+-.++|++||.+..++....
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~-------------- 147 (261)
T PRK08265 82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGR-------------- 147 (261)
T ss_pred CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCC--------------
Confidence 789999997532 112223456788999999999987653 223589999997554432221
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
..|+.+|...+.+.+.++.+ .|+++.+++||.+..+...............+.... .+ ...+...
T Consensus 148 -------~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~---~p--~~r~~~p 215 (261)
T PRK08265 148 -------WLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPF---HL--LGRVGDP 215 (261)
T ss_pred -------chhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhccc---CC--CCCccCH
Confidence 37999999999999888765 389999999998755421110000000111111100 01 1124578
Q ss_pred HhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 152 KDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 152 ~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
+|+++++..++... ..+|. +.++|
T Consensus 216 ~dva~~~~~l~s~~~~~~tG~~i~vdg 242 (261)
T PRK08265 216 EEVAQVVAFLCSDAASFVTGADYAVDG 242 (261)
T ss_pred HHHHHHHHHHcCccccCccCcEEEECC
Confidence 99999999998653 33453 45544
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.64 E-value=8.7e-07 Score=68.53 Aligned_cols=134 Identities=15% Similarity=0.084 Sum_probs=86.1
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHH----HHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEA----AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||.... ..........+..|+.++..++++ +++.+.+++|++||.....+...
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~------------- 146 (242)
T TIGR01829 80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFG------------- 146 (242)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCC-------------
Confidence 789999997543 111223456678899987776555 44556679999998644322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
. ..|+.+|...+.+++.++++ .++++++++|+.+.++.... ....+...+....+. ..+.
T Consensus 147 --~------~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~---~~~~~~~~~~~~~~~------~~~~ 209 (242)
T TIGR01829 147 --Q------TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMA---MREDVLNSIVAQIPV------GRLG 209 (242)
T ss_pred --c------chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccc---cchHHHHHHHhcCCC------CCCc
Confidence 1 37999999998888877653 48999999999998765332 112222222222211 1245
Q ss_pred eHHhHHHHHHHhhcC
Q 026820 150 HVKDVAKAQVLLFET 164 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~ 164 (232)
..+|+++++..++..
T Consensus 210 ~~~~~a~~~~~l~~~ 224 (242)
T TIGR01829 210 RPEEIAAAVAFLASE 224 (242)
T ss_pred CHHHHHHHHHHHcCc
Confidence 578999998887754
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=8.5e-07 Score=69.44 Aligned_cols=149 Identities=13% Similarity=0.047 Sum_probs=93.3
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc----C-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF----G-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||++|..... .........+..|+.++.++++++.+. + ..++|++||.....+.+.
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~------------ 153 (260)
T PRK06198 86 DALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPF------------ 153 (260)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCC------------
Confidence 7899999975431 112223556899999999998887532 2 247999998744221111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCC---CC-ChhHHHHHHHHhCCCCccCCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQP---YV-NASGAVLQRLLQGSKDTQEHY 144 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~ 144 (232)
.+.|+.+|...|.+.+.++.+. ++.++.++|+.+.++.... .. .....++....... .
T Consensus 154 ---------~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~------~ 218 (260)
T PRK06198 154 ---------LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ------P 218 (260)
T ss_pred ---------cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC------C
Confidence 1489999999999998877543 6899999999998875311 00 01111222111111 1
Q ss_pred ccCceeHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 145 WLGAVHVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 145 ~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
...+++.+|+++++..++.... ..|. +.+.++
T Consensus 219 ~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~ 253 (260)
T PRK06198 219 FGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQS 253 (260)
T ss_pred ccCCcCHHHHHHHHHHHcChhhCCccCceEeECCc
Confidence 2246789999999999886442 3443 455443
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=9.2e-07 Score=66.48 Aligned_cols=126 Identities=17% Similarity=0.093 Sum_probs=84.2
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||...... ..+.....+++|+.++.++++++... +-.+++++||.....+.+.
T Consensus 57 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~--------------- 121 (199)
T PRK07578 57 DAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPG--------------- 121 (199)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCC---------------
Confidence 78999999754311 12234556789999999999987653 2247999998643211111
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH--cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK--NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVK 152 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 152 (232)
...|+.+|...+.+.+.++.+ .|+.+..+.||.+-.+. ... .+. ++ ...++..+
T Consensus 122 ------~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~--------~~~-~~~-------~~--~~~~~~~~ 177 (199)
T PRK07578 122 ------GASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESL--------EKY-GPF-------FP--GFEPVPAA 177 (199)
T ss_pred ------chHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCch--------hhh-hhc-------CC--CCCCCCHH
Confidence 148999999999999888765 48999999999773221 000 000 11 12467899
Q ss_pred hHHHHHHHhhcCC
Q 026820 153 DVAKAQVLLFETS 165 (232)
Q Consensus 153 D~a~~~~~~~~~~ 165 (232)
|+++++..++...
T Consensus 178 ~~a~~~~~~~~~~ 190 (199)
T PRK07578 178 RVALAYVRSVEGA 190 (199)
T ss_pred HHHHHHHHHhccc
Confidence 9999999998754
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=9e-07 Score=68.54 Aligned_cols=130 Identities=15% Similarity=0.043 Sum_probs=86.4
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+.....+..|+.++.++++++ .+.+..++|++||... +....
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~-~~~~~------------- 150 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAA-RNAFP------------- 150 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHh-CcCCC-------------
Confidence 78999999754311 11234667889999888877775 3444568999999733 32111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAE---KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
. ...|+.+|...+.+.+.++. ..+++++++||+.+-.+..... .. . .. + ....++
T Consensus 151 -~------~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~--~~----~----~~---~--~~~~~~ 208 (241)
T PRK07454 151 -Q------WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE--TV----Q----AD---F--DRSAML 208 (241)
T ss_pred -C------ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc--cc----c----cc---c--ccccCC
Confidence 1 14799999999999887654 3489999999999865532110 00 0 00 0 011357
Q ss_pred eHHhHHHHHHHhhcCCC
Q 026820 150 HVKDVAKAQVLLFETSA 166 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~ 166 (232)
..+|++++++.++..+.
T Consensus 209 ~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 209 SPEQVAQTILHLAQLPP 225 (241)
T ss_pred CHHHHHHHHHHHHcCCc
Confidence 89999999999997663
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.62 E-value=6.7e-07 Score=77.19 Aligned_cols=149 Identities=16% Similarity=0.131 Sum_probs=95.7
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|++||+||.... ....+..+..+++|+.++.++++++... +-.++|++||.+...+.+.
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 410 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPP-------------- 410 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCC--------------
Confidence 799999997532 1112234677899999999999987653 3358999999755322111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
...|+.+|...+.+.+.++.+. |+++.++.||.+..+...............+.+..+ ...+..
T Consensus 411 -------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 477 (520)
T PRK06484 411 -------RNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIP------LGRLGD 477 (520)
T ss_pred -------CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCC------CCCCcC
Confidence 1489999999999999887653 899999999999765321100000111122222211 113567
Q ss_pred HHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 151 VKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 151 v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
++|++++++.++... ..+|. +.+.+.
T Consensus 478 ~~dia~~~~~l~s~~~~~~~G~~i~vdgg 506 (520)
T PRK06484 478 PEEVAEAIAFLASPAASYVNGATLTVDGG 506 (520)
T ss_pred HHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 999999999988643 24554 455544
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=5.2e-07 Score=70.64 Aligned_cols=136 Identities=16% Similarity=0.056 Sum_probs=87.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... .....+..++.|+.+...+++++. +.+..++|++||.....+...
T Consensus 93 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 159 (258)
T PRK06935 93 DILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKF------------- 159 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCC-------------
Confidence 78999999864311 122345677889999877776654 344568999999744222111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+++.++++. |+++++++||.+..+..... .........+.... + ...+.
T Consensus 160 --------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~----~--~~~~~ 224 (258)
T PRK06935 160 --------VPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPI-RADKNRNDEILKRI----P--AGRWG 224 (258)
T ss_pred --------chhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhc-ccChHHHHHHHhcC----C--CCCCC
Confidence 1379999999999999988753 89999999999876542210 00011111121111 1 12367
Q ss_pred eHHhHHHHHHHhhcC
Q 026820 150 HVKDVAKAQVLLFET 164 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~ 164 (232)
..+|++..+..++..
T Consensus 225 ~~~dva~~~~~l~s~ 239 (258)
T PRK06935 225 EPDDLMGAAVFLASR 239 (258)
T ss_pred CHHHHHHHHHHHcCh
Confidence 789999999988864
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.1e-06 Score=67.91 Aligned_cols=125 Identities=13% Similarity=-0.053 Sum_probs=84.1
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ....+.....+++|+.++.++++++.. .+..++|++||.....+.+
T Consensus 89 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------- 155 (239)
T PRK08703 89 DGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKA------------- 155 (239)
T ss_pred CEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCC-------------
Confidence 789999997432 111122345679999998888887743 3446899999863321110
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc----CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN----GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
.. ..|+.+|...|.+++.++.+. ++++++++||.+.++...... .+ .....
T Consensus 156 --~~------~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~-----------~~------~~~~~ 210 (239)
T PRK08703 156 --YW------GGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSH-----------PG------EAKSE 210 (239)
T ss_pred --Cc------cchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccC-----------CC------CCccc
Confidence 11 379999999999998887654 589999999999887422100 00 01113
Q ss_pred ceeHHhHHHHHHHhhc
Q 026820 148 AVHVKDVAKAQVLLFE 163 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~ 163 (232)
+...+|++..+..++.
T Consensus 211 ~~~~~~~~~~~~~~~~ 226 (239)
T PRK08703 211 RKSYGDVLPAFVWWAS 226 (239)
T ss_pred cCCHHHHHHHHHHHhC
Confidence 4678999999999886
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.2e-06 Score=69.18 Aligned_cols=136 Identities=17% Similarity=0.139 Sum_probs=86.1
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----c-CCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----F-GVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||++|..... ...+.....+.+|+.++.++++++.. . ...++|++||.....+.+.
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~------------ 147 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPW------------ 147 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCC------------
Confidence 7899999975431 12223467789999999999998642 2 2358999998743221111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCeeCCCCCCCC----ChhHHHHHHHHhCCCCccCCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAE---KNGTDVVAIHPATSLGPFPQPYV----NASGAVLQRLLQGSKDTQEHY 144 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 144 (232)
...|+.+|...+.+...+.. ..++++++++||.+.++...... ............. .
T Consensus 148 ---------~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~ 211 (272)
T PRK07832 148 ---------HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR-------F 211 (272)
T ss_pred ---------CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh-------c
Confidence 13799999988887776653 35899999999999876422100 0000001111100 0
Q ss_pred ccCceeHHhHHHHHHHhhcC
Q 026820 145 WLGAVHVKDVAKAQVLLFET 164 (232)
Q Consensus 145 ~~~~i~v~D~a~~~~~~~~~ 164 (232)
....+..+|+|+.++.++.+
T Consensus 212 ~~~~~~~~~vA~~~~~~~~~ 231 (272)
T PRK07832 212 RGHAVTPEKAAEKILAGVEK 231 (272)
T ss_pred ccCCCCHHHHHHHHHHHHhc
Confidence 12357899999999999953
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.3e-06 Score=68.21 Aligned_cols=137 Identities=16% Similarity=0.075 Sum_probs=86.6
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ....+..+..++.|+.++.++++++.+ .+ ..++|++||....-+..
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~------------- 146 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGP------------- 146 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCC-------------
Confidence 789999986432 111222466889999999999999843 22 24799999863211000
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
. ...|+.+|...+.+.+.++.+ .|+++.+++||.+.+................+.+..+ ..-
T Consensus 147 --~------~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 212 (252)
T PRK07677 147 --G------VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVP------LGR 212 (252)
T ss_pred --C------CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCC------CCC
Confidence 0 137999999999998887655 3799999999999753211111011222333322211 113
Q ss_pred ceeHHhHHHHHHHhhcC
Q 026820 148 AVHVKDVAKAQVLLFET 164 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~ 164 (232)
+...+|+++++..++..
T Consensus 213 ~~~~~~va~~~~~l~~~ 229 (252)
T PRK07677 213 LGTPEEIAGLAYFLLSD 229 (252)
T ss_pred CCCHHHHHHHHHHHcCc
Confidence 56789999999888754
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=1e-06 Score=68.51 Aligned_cols=127 Identities=19% Similarity=0.118 Sum_probs=84.9
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ........+.++.|+.++.++++++. +.+.+++|++||.....+...
T Consensus 94 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~------------ 161 (247)
T PRK08945 94 DGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRAN------------ 161 (247)
T ss_pred CEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCC------------
Confidence 789999987533 11123346778899999888888764 456679999999744322211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...|.++..+..+. ++.+++++|+.+-.+..... .... ....+
T Consensus 162 ---------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~-----------~~~~------~~~~~ 215 (247)
T PRK08945 162 ---------WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASA-----------FPGE------DPQKL 215 (247)
T ss_pred ---------CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhh-----------cCcc------cccCC
Confidence 1379999999999998877654 68888899987754311100 0000 01135
Q ss_pred eeHHhHHHHHHHhhcCC
Q 026820 149 VHVKDVAKAQVLLFETS 165 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~ 165 (232)
...+|+++.+..++...
T Consensus 216 ~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 216 KTPEDIMPLYLYLMGDD 232 (247)
T ss_pred CCHHHHHHHHHHHhCcc
Confidence 67899999999987543
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.8e-06 Score=67.73 Aligned_cols=148 Identities=12% Similarity=0.017 Sum_probs=90.8
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||....... .++.+..++.|+.++..+++++.. .+..++|++||.....+.+
T Consensus 74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------- 139 (258)
T PRK06398 74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTR-------------- 139 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCC--------------
Confidence 789999998543111 122345679999999999887653 3456899999974421111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCC--------ChhHHHHHHHHhCCCCccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYV--------NASGAVLQRLLQGSKDTQE 142 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 142 (232)
. ...|+.+|...|.+.+.++.+. ++.+.+++||.+-.+...... .........+....
T Consensus 140 -~------~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 207 (258)
T PRK06398 140 -N------AAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMH----- 207 (258)
T ss_pred -C------CchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcC-----
Confidence 1 1489999999999999987764 488999999988544211000 00000111111100
Q ss_pred CcccCceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 143 HYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
....+...+|++++++.++... ..+|. +.+.+
T Consensus 208 -~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dg 242 (258)
T PRK06398 208 -PMKRVGKPEEVAYVVAFLASDLASFITGECVTVDG 242 (258)
T ss_pred -CcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECC
Confidence 1124567999999999988643 23553 34443
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.8e-06 Score=69.17 Aligned_cols=139 Identities=16% Similarity=0.007 Sum_probs=89.0
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||....... .+..+..+++|+.++.++++++... ...++|++||.+...+.+.
T Consensus 87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 152 (296)
T PRK05872 87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPG-------------- 152 (296)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCC--------------
Confidence 799999998654111 1223567889999999999887532 2248999999744222111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
...|+.+|...|.+.+.+..+ .|+.+.++.||.+..+........ ......+....+. ....++.
T Consensus 153 -------~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~-~~~~~~~~~~~~~----p~~~~~~ 220 (296)
T PRK05872 153 -------MAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD-LPAFRELRARLPW----PLRRTTS 220 (296)
T ss_pred -------chHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc-chhHHHHHhhCCC----cccCCCC
Confidence 148999999999998887643 489999999998865432211000 0112222211111 1124578
Q ss_pred HHhHHHHHHHhhcCC
Q 026820 151 VKDVAKAQVLLFETS 165 (232)
Q Consensus 151 v~D~a~~~~~~~~~~ 165 (232)
.+|+++++..++...
T Consensus 221 ~~~va~~i~~~~~~~ 235 (296)
T PRK05872 221 VEKCAAAFVDGIERR 235 (296)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998654
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.3e-06 Score=68.37 Aligned_cols=142 Identities=16% Similarity=0.076 Sum_probs=90.4
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cC--------CCEEEEecccceeccCCCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FG--------VRRVVLTSSISSIVPNPNWPQGK 64 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~--------~~~~i~~Ss~~~~~~~~~~~~~~ 64 (232)
|+|||+||...... .....+..+..|+.+..++++++.. .. ..++|++||.....+..
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------ 161 (258)
T PRK06949 88 DILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP------ 161 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC------
Confidence 78999999754311 1223567788999999999987652 11 24899999874321100
Q ss_pred ccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCcc
Q 026820 65 VIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQ 141 (232)
Q Consensus 65 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
. ...|+.+|...|.+++.++.+ .++++++++||.++++...... .......+ ... .
T Consensus 162 ---------~------~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~-~~~-~-- 220 (258)
T PRK06949 162 ---------Q------IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHW--ETEQGQKL-VSM-L-- 220 (258)
T ss_pred ---------C------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhcc--ChHHHHHH-Hhc-C--
Confidence 1 148999999999999888764 4899999999999887533211 11111111 111 0
Q ss_pred CCcccCceeHHhHHHHHHHhhcCC--CCCceE
Q 026820 142 EHYWLGAVHVKDVAKAQVLLFETS--AASGRY 171 (232)
Q Consensus 142 ~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~ 171 (232)
+ ...+...+|+++++..++... ...|..
T Consensus 221 ~--~~~~~~p~~~~~~~~~l~~~~~~~~~G~~ 250 (258)
T PRK06949 221 P--RKRVGKPEDLDGLLLLLAADESQFINGAI 250 (258)
T ss_pred C--CCCCcCHHHHHHHHHHHhChhhcCCCCcE
Confidence 0 124566899999999988643 234543
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.4e-06 Score=67.26 Aligned_cols=128 Identities=14% Similarity=0.031 Sum_probs=85.9
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||++|..... ...+.....+..|+.++.++++++.+. +.+++|++||.....+. .
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------~------ 148 (237)
T PRK07326 84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFF---------A------ 148 (237)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCC---------C------
Confidence 7899999876431 112223467888999999998887642 44689999987432110 0
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
.. ..|+.+|...+.+.+.+..+ .+++++++||+.+..+..... .. ......+.
T Consensus 149 ~~------~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-~~-----------------~~~~~~~~ 204 (237)
T PRK07326 149 GG------AAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-PS-----------------EKDAWKIQ 204 (237)
T ss_pred CC------chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc-cc-----------------hhhhccCC
Confidence 11 37999999999888876533 489999999999866432110 00 00012367
Q ss_pred HHhHHHHHHHhhcCCCC
Q 026820 151 VKDVAKAQVLLFETSAA 167 (232)
Q Consensus 151 v~D~a~~~~~~~~~~~~ 167 (232)
.+|+++.+..++..+..
T Consensus 205 ~~d~a~~~~~~l~~~~~ 221 (237)
T PRK07326 205 PEDIAQLVLDLLKMPPR 221 (237)
T ss_pred HHHHHHHHHHHHhCCcc
Confidence 89999999999977654
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.5e-06 Score=66.11 Aligned_cols=149 Identities=17% Similarity=0.143 Sum_probs=92.2
Q ss_pred CeEEEeecCCCCCCCCC----chhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPKD----PEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||......... ..++.++.|+.++.++++++.. .+..++|++||...... . .
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-~--------~----- 149 (263)
T PRK08226 84 DILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV-A--------D----- 149 (263)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc-C--------C-----
Confidence 78999999754421111 2345688999999999988653 34458999998633110 0 0
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCC-----CChhHHHHHHHHhCCCCccCCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPY-----VNASGAVLQRLLQGSKDTQEHY 144 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 144 (232)
+. ...|+.+|...|.+.+.++.+. ++++..++||.+.++..... ..........+..+.+
T Consensus 150 -~~-----~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p------ 217 (263)
T PRK08226 150 -PG-----ETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIP------ 217 (263)
T ss_pred -CC-----cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCC------
Confidence 00 1479999999999999887653 79999999999977532110 0011122233322221
Q ss_pred ccCceeHHhHHHHHHHhhcCC--CCCceE-EEec
Q 026820 145 WLGAVHVKDVAKAQVLLFETS--AASGRY-LCTN 175 (232)
Q Consensus 145 ~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~~~~ 175 (232)
...+...+|+++++..++... ...|.. .++|
T Consensus 218 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dg 251 (263)
T PRK08226 218 LRRLADPLEVGELAAFLASDESSYLTGTQNVIDG 251 (263)
T ss_pred CCCCCCHHHHHHHHHHHcCchhcCCcCceEeECC
Confidence 113568999999998887543 334543 3443
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.2e-06 Score=68.83 Aligned_cols=132 Identities=11% Similarity=-0.001 Sum_probs=82.8
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHH----HHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNV----LEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l----~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..+.....+++|+.+..++ +..+.+.+..++|++||.....+.+.
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~------------- 153 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPL------------- 153 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCc-------------
Confidence 78999999754311 1122345667776666554 44455555568999999744211110
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK-----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+.+.+..+ .++.+++++|+.+-.+... ......... ......
T Consensus 154 --------~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~--------~~~~~~~~~----~~~~~~ 213 (334)
T PRK07109 154 --------QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD--------WARSRLPVE----PQPVPP 213 (334)
T ss_pred --------chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh--------hhhhhcccc----ccCCCC
Confidence 148999999999888877543 3689999999998654211 111111110 011224
Q ss_pred ceeHHhHHHHHHHhhcCC
Q 026820 148 AVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~ 165 (232)
+...+|+|++++.++.++
T Consensus 214 ~~~pe~vA~~i~~~~~~~ 231 (334)
T PRK07109 214 IYQPEVVADAILYAAEHP 231 (334)
T ss_pred CCCHHHHHHHHHHHHhCC
Confidence 668999999999999765
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.3e-06 Score=74.92 Aligned_cols=149 Identities=18% Similarity=0.093 Sum_probs=91.3
Q ss_pred CeEEEeecCCCCCCC-C---CchhhhHHHHHHHHHHHHHHHH----HcC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDDP-K---DPEKELLIPAVQGTLNVLEAAK----KFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~~-~---~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||....... . ......++.|+.+...+.+.+. +.+ -.++|++||..++++...
T Consensus 495 DilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~------------ 562 (676)
T TIGR02632 495 DIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKN------------ 562 (676)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCC------------
Confidence 789999997543111 1 1234567788888777665443 333 247999999755544322
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCee-CCCCCCCCChh---------HHHHHHHHhCCC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSL-GPFPQPYVNAS---------GAVLQRLLQGSK 138 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~-G~~~~~~~~~~---------~~~~~~~~~~~~ 138 (232)
...|+.+|...|.+++.++.+ .|+++..++|+.++ |.......... ...+......
T Consensus 563 ---------~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 631 (676)
T TIGR02632 563 ---------ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAK-- 631 (676)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHh--
Confidence 148999999999999988765 37999999999987 43322110000 0001111111
Q ss_pred CccCCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 139 DTQEHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 139 ~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
......+++.+|+++++..++... ..+|. ++++|
T Consensus 632 ---r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDG 668 (676)
T TIGR02632 632 ---RTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDG 668 (676)
T ss_pred ---cCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence 112235689999999999887542 34464 46654
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.2e-06 Score=65.85 Aligned_cols=137 Identities=20% Similarity=0.146 Sum_probs=86.1
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||..... ...+.....+++|+.++.++++++... .-.++|++||.....+...
T Consensus 88 D~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~-------------- 153 (264)
T PRK07576 88 DVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPM-------------- 153 (264)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCC--------------
Confidence 7899999864321 112233566789999999999887642 1248999999743221111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
...|+.+|...|.+++.++.+ .++.+++++|+.+.+......... ........... . ....+..
T Consensus 154 -------~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~-~~~~~~~~~~~---~--~~~~~~~ 220 (264)
T PRK07576 154 -------QAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAP-SPELQAAVAQS---V--PLKRNGT 220 (264)
T ss_pred -------ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhccc-CHHHHHHHHhc---C--CCCCCCC
Confidence 148999999999999987654 478999999998865321110000 00111111111 0 1224677
Q ss_pred HHhHHHHHHHhhcC
Q 026820 151 VKDVAKAQVLLFET 164 (232)
Q Consensus 151 v~D~a~~~~~~~~~ 164 (232)
.+|++++++.++..
T Consensus 221 ~~dva~~~~~l~~~ 234 (264)
T PRK07576 221 KQDIANAALFLASD 234 (264)
T ss_pred HHHHHHHHHHHcCh
Confidence 99999999999965
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=2e-06 Score=66.73 Aligned_cols=125 Identities=15% Similarity=0.084 Sum_probs=85.5
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||++|...... ..+.....++.|+.++.++++++.. .+..++|++||....++...
T Consensus 78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------- 144 (243)
T PRK07102 78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRAS------------- 144 (243)
T ss_pred CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCC-------------
Confidence 78999998754311 1112246788999999999988653 35578999998743222111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAE---KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++. +.|+++++++|+.+.++.... .. .+ ...++
T Consensus 145 --------~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~---------------~~--~~--~~~~~ 197 (243)
T PRK07102 145 --------NYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG---------------LK--LP--GPLTA 197 (243)
T ss_pred --------CcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc---------------cC--CC--ccccC
Confidence 13799999999999888754 348999999999998652111 00 01 11356
Q ss_pred eHHhHHHHHHHhhcCC
Q 026820 150 HVKDVAKAQVLLFETS 165 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~ 165 (232)
..+|+++.+...+.++
T Consensus 198 ~~~~~a~~i~~~~~~~ 213 (243)
T PRK07102 198 QPEEVAKDIFRAIEKG 213 (243)
T ss_pred CHHHHHHHHHHHHhCC
Confidence 7999999999988754
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.3e-06 Score=70.91 Aligned_cols=133 Identities=17% Similarity=0.068 Sum_probs=87.1
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||........ +.....+++|+.++.++++++. +.+..++|++||.+...+.+.
T Consensus 86 D~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~------------- 152 (330)
T PRK06139 86 DVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPY------------- 152 (330)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCC-------------
Confidence 7899999976542212 2234578999999988887753 344458999998744222111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.+..+ .++.++.+.|+.+..+....... . .+... .....+
T Consensus 153 --------~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~--------~-~~~~~---~~~~~~ 212 (330)
T PRK06139 153 --------AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGAN--------Y-TGRRL---TPPPPV 212 (330)
T ss_pred --------chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccc--------c-ccccc---cCCCCC
Confidence 148999999888777776654 37899999999997764321100 0 01000 012246
Q ss_pred eeHHhHHHHHHHhhcCCC
Q 026820 149 VHVKDVAKAQVLLFETSA 166 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~ 166 (232)
...+|+|++++.++.++.
T Consensus 213 ~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 213 YDPRRVAKAVVRLADRPR 230 (330)
T ss_pred CCHHHHHHHHHHHHhCCC
Confidence 789999999999997654
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.53 E-value=4.6e-06 Score=65.92 Aligned_cols=152 Identities=18% Similarity=0.151 Sum_probs=90.0
Q ss_pred CeEEEeecCCCC-CCC-C---CchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-DDP-K---DPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-~~~-~---~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||.... ... . ...+..++.|+.++..+++++. +.+ .++|++||.....+...
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~------------ 150 (272)
T PRK08589 84 DVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLY------------ 150 (272)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCC------------
Confidence 789999998642 111 1 1234566789988877777654 334 58999999744222111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhH-HHHHHHHhCCCCccCCcccC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASG-AVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+++.++.+ .|+.+.++.||.+..+.......... .....+........+ ...
T Consensus 151 ---------~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 219 (272)
T PRK08589 151 ---------RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTP--LGR 219 (272)
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCC--CCC
Confidence 147999999999999998764 37999999999986543211000000 000111000000001 113
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+...+|++++++.++... ..+|. +.+.+.
T Consensus 220 ~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg 251 (272)
T PRK08589 220 LGKPEEVAKLVVFLASDDSSFITGETIRIDGG 251 (272)
T ss_pred CcCHHHHHHHHHHHcCchhcCcCCCEEEECCC
Confidence 567999999999988643 33454 344443
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=1e-06 Score=68.33 Aligned_cols=125 Identities=19% Similarity=0.169 Sum_probs=86.2
Q ss_pred CeEEEeecCCCC-CC---CCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTL-DD---PKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~-~~---~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+++|+||.... .. ..+..+..++.|+.++.++++++... +.+++|++||.+..++.+.
T Consensus 73 d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------- 137 (240)
T PRK06101 73 ELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPR--------------- 137 (240)
T ss_pred CEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCC---------------
Confidence 578888886432 11 11123467899999999999998753 2357999998754333211
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAE---KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
...|+.+|...|.+.+.++. ..|++++++|||.++++..... . .. . ...+..
T Consensus 138 ------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~-~----------~~----~----~~~~~~ 192 (240)
T PRK06101 138 ------AEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN-T----------FA----M----PMIITV 192 (240)
T ss_pred ------CchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC-C----------CC----C----CcccCH
Confidence 13799999999999888763 4589999999999987642211 0 00 0 024679
Q ss_pred HhHHHHHHHhhcCC
Q 026820 152 KDVAKAQVLLFETS 165 (232)
Q Consensus 152 ~D~a~~~~~~~~~~ 165 (232)
+|+++.+...++..
T Consensus 193 ~~~a~~i~~~i~~~ 206 (240)
T PRK06101 193 EQASQEIRAQLARG 206 (240)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999988764
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=3.3e-06 Score=66.14 Aligned_cols=148 Identities=15% Similarity=0.056 Sum_probs=90.6
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||..... ...++....+++|+.++..+++++.. .+..++|++||.....+.+.
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 154 (260)
T PRK07063 88 DVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPG------------- 154 (260)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCC-------------
Confidence 7899999975431 11223456778999999888888643 34458999999743211111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCC---hhHHHHHHHHhCCCCccCCccc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVN---ASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
...|+.+|...+.+.+.++.+. |+++..++||.+-.+....... .............+ . .
T Consensus 155 --------~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~----~ 220 (260)
T PRK07063 155 --------CFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQP--M----K 220 (260)
T ss_pred --------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCC--C----C
Confidence 1479999999999999887653 7999999999885432110000 00001111111111 1 1
Q ss_pred CceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 147 GAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
-+...+|++.+++.++... ..+|. ..+.|
T Consensus 221 r~~~~~~va~~~~fl~s~~~~~itG~~i~vdg 252 (260)
T PRK07063 221 RIGRPEEVAMTAVFLASDEAPFINATCITIDG 252 (260)
T ss_pred CCCCHHHHHHHHHHHcCccccccCCcEEEECC
Confidence 2556899999999988653 34554 34443
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.4e-06 Score=66.71 Aligned_cols=138 Identities=14% Similarity=0.086 Sum_probs=85.6
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ....+.....+++|+.+...+++++ .+.+..++|++||... +.... .
T Consensus 85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~-~~~~~-------~---- 152 (254)
T PRK07478 85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVG-HTAGF-------P---- 152 (254)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHh-hccCC-------C----
Confidence 789999997532 1111234677899998777776554 4445568999999633 11100 0
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
. ...|+.+|...+.+.+.++.+. |+.+.+++||.+-.+.... ...... ......... + ...+
T Consensus 153 --~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~-~~~~~~~~~---~--~~~~ 217 (254)
T PRK07478 153 --G------MAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRA-MGDTPE-ALAFVAGLH---A--LKRM 217 (254)
T ss_pred --C------cchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccccc-ccCCHH-HHHHHHhcC---C--CCCC
Confidence 0 1489999999999999887654 7999999999986542211 001111 111111110 0 1235
Q ss_pred eeHHhHHHHHHHhhcCC
Q 026820 149 VHVKDVAKAQVLLFETS 165 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~ 165 (232)
...+|++++++.++...
T Consensus 218 ~~~~~va~~~~~l~s~~ 234 (254)
T PRK07478 218 AQPEEIAQAALFLASDA 234 (254)
T ss_pred cCHHHHHHHHHHHcCch
Confidence 67999999999988653
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=5.6e-06 Score=65.56 Aligned_cols=166 Identities=19% Similarity=0.152 Sum_probs=94.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCC-CCCc---cCCCCCCC-
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWP-QGKV---IDETSWTD- 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~-~~~~---~~E~~~~~- 73 (232)
|+|||+||.... ..+....+++|+.++.++++++... .-.+.|++||.+......... .+.. ++..+...
T Consensus 78 d~li~nAG~~~~---~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (275)
T PRK06940 78 TGLVHTAGVSPS---QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSL 154 (275)
T ss_pred CEEEECCCcCCc---hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccc
Confidence 789999998643 4567889999999999999987643 113567777764432210000 0000 01110000
Q ss_pred ----cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCC-hhHHHHHHHHhCCCCccCCcc
Q 026820 74 ----LDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVN-ASGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 74 ----~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 145 (232)
+.........|+.||...+.+.+.++.+ .|+.+..+.||.+-.+....... ........+....+ .
T Consensus 155 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p------~ 228 (275)
T PRK06940 155 PFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP------A 228 (275)
T ss_pred ccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC------c
Confidence 0000011257999999999998877654 48999999999987653211000 00111122221111 1
Q ss_pred cCceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 146 LGAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
.-+...+|++++++.++... ..+|. +.+.+
T Consensus 229 ~r~~~peeia~~~~fL~s~~~~~itG~~i~vdg 261 (275)
T PRK06940 229 GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDG 261 (275)
T ss_pred ccCCCHHHHHHHHHHHcCcccCcccCceEEEcC
Confidence 13677899999999988543 33553 44444
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.7e-06 Score=65.68 Aligned_cols=137 Identities=15% Similarity=0.055 Sum_probs=88.6
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc----C-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF----G-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||..... ...+.....+++|+.++.++++++... + -.++|++||.....+...
T Consensus 87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 154 (253)
T PRK08993 87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIR------------ 154 (253)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCC------------
Confidence 7999999986431 122345678899999999999886532 2 247999999744222111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
. ..|+.+|...|.+.+.++.+ .|+.+..++||.+-.+.... ..........+...- +. .-+
T Consensus 155 ---~------~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~-~~~~~~~~~~~~~~~----p~--~r~ 218 (253)
T PRK08993 155 ---V------PSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQ-LRADEQRSAEILDRI----PA--GRW 218 (253)
T ss_pred ---C------cchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhh-hccchHHHHHHHhcC----CC--CCC
Confidence 0 37999999999999888765 48999999999996543211 000011111222111 11 126
Q ss_pred eeHHhHHHHHHHhhcCC
Q 026820 149 VHVKDVAKAQVLLFETS 165 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~ 165 (232)
.-.+|+++.+..++...
T Consensus 219 ~~p~eva~~~~~l~s~~ 235 (253)
T PRK08993 219 GLPSDLMGPVVFLASSA 235 (253)
T ss_pred cCHHHHHHHHHHHhCcc
Confidence 66899999999998653
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.7e-06 Score=67.61 Aligned_cols=146 Identities=17% Similarity=0.092 Sum_probs=90.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||...... ..+.....++.|+.++..+++++.. .+ -.++|++||....... ...
T Consensus 88 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------~~~--- 156 (253)
T PRK05867 88 DIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN--------VPQ--- 156 (253)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC--------CCC---
Confidence 78999999865411 1122355678999999999988753 22 2368998886331110 000
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
.. ..|+.+|...+.+.+.++.+ .|+++.+++||.+-.+.... .......+....+ ...+
T Consensus 157 --~~------~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~----~~~~~~~~~~~~~------~~r~ 218 (253)
T PRK05867 157 --QV------SHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP----YTEYQPLWEPKIP------LGRL 218 (253)
T ss_pred --Cc------cchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc----chHHHHHHHhcCC------CCCC
Confidence 00 37999999999999998765 38999999999986543211 1111112211111 1135
Q ss_pred eeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 149 VHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
...+|++++++.++... ..+|. ..++|
T Consensus 219 ~~p~~va~~~~~L~s~~~~~~tG~~i~vdg 248 (253)
T PRK05867 219 GRPEELAGLYLYLASEASSYMTGSDIVIDG 248 (253)
T ss_pred cCHHHHHHHHHHHcCcccCCcCCCeEEECC
Confidence 67999999999998643 23453 44444
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=5.4e-06 Score=64.83 Aligned_cols=124 Identities=12% Similarity=0.052 Sum_probs=80.7
Q ss_pred CeEEEeecCCCCC-CCCCch---hhhHHHHHHHHHH----HHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD-DPKDPE---KELLIPAVQGTLN----VLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~-~~~~~~---~~~~~~nv~~~~~----l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||++|..... ....+. .+.+++|+.++.. ++.++.+.+..++|++||.+...+.+
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~-------------- 154 (253)
T PRK07904 89 DVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRR-------------- 154 (253)
T ss_pred CEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCC--------------
Confidence 7889999885431 111111 2458999887776 55666666667999999974311100
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHH---HHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFA---EKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
.. ..|+.||...+.+.+.+. +..++++++++||.+..+.... ... ....+
T Consensus 155 -~~------~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~------------~~~--------~~~~~ 207 (253)
T PRK07904 155 -SN------FVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAH------------AKE--------APLTV 207 (253)
T ss_pred -CC------cchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhcc------------CCC--------CCCCC
Confidence 11 379999999987766654 3458999999999997532110 000 11246
Q ss_pred eHHhHHHHHHHhhcCC
Q 026820 150 HVKDVAKAQVLLFETS 165 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~ 165 (232)
..+|+|+.++..+.++
T Consensus 208 ~~~~~A~~i~~~~~~~ 223 (253)
T PRK07904 208 DKEDVAKLAVTAVAKG 223 (253)
T ss_pred CHHHHHHHHHHHHHcC
Confidence 7999999999999765
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=5.8e-06 Score=64.89 Aligned_cols=136 Identities=18% Similarity=0.125 Sum_probs=88.1
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+.....+..|+.+...+++++.. .+ -.++|++||.....+..
T Consensus 99 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~------------- 165 (262)
T PRK07831 99 DVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQH------------- 165 (262)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC-------------
Confidence 78999999754311 1123455678899999988887653 22 34788888763321111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
. ...|+.+|...|.+.+.++.+ .++++.+++|+.+..+..... ........+....+ + .-+
T Consensus 166 --~------~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~--~~~~~~~~~~~~~~--~----~r~ 229 (262)
T PRK07831 166 --G------QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV--TSAELLDELAAREA--F----GRA 229 (262)
T ss_pred --C------CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc--cCHHHHHHHHhcCC--C----CCC
Confidence 1 137999999999999998765 489999999999987643211 11222233322221 1 135
Q ss_pred eeHHhHHHHHHHhhcCC
Q 026820 149 VHVKDVAKAQVLLFETS 165 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~ 165 (232)
...+|++++++.++...
T Consensus 230 ~~p~~va~~~~~l~s~~ 246 (262)
T PRK07831 230 AEPWEVANVIAFLASDY 246 (262)
T ss_pred cCHHHHHHHHHHHcCch
Confidence 66899999999988653
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.2e-06 Score=64.01 Aligned_cols=92 Identities=22% Similarity=0.255 Sum_probs=69.6
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~ 76 (232)
|+|||++|.... ....+.....++.|+.++.++++++.+.+.+++|++||.+..++....
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~---------------- 146 (180)
T smart00822 83 RGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQ---------------- 146 (180)
T ss_pred eEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCc----------------
Confidence 689999997543 112233467789999999999999988777899999997554443221
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCe
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATS 114 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i 114 (232)
..|+.+|...+.++... +..+++++++.|+.+
T Consensus 147 -----~~y~~sk~~~~~~~~~~-~~~~~~~~~~~~g~~ 178 (180)
T smart00822 147 -----ANYAAANAFLDALAAHR-RARGLPATSINWGAW 178 (180)
T ss_pred -----hhhHHHHHHHHHHHHHH-HhcCCceEEEeeccc
Confidence 47999999999998654 466888998887765
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.2e-06 Score=67.29 Aligned_cols=130 Identities=17% Similarity=0.102 Sum_probs=85.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ........++.|+.++.++++++.. .+..++|++||....++...
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------- 148 (263)
T PRK09072 82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPG------------- 148 (263)
T ss_pred CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCC-------------
Confidence 78999999865311 1123356778999999999988754 33457999988644333211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+++.++.+ .++.++++.||.+..+.... .... ... .....+.
T Consensus 149 --------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~-------~~~~-~~~------~~~~~~~ 206 (263)
T PRK09072 149 --------YASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE-------AVQA-LNR------ALGNAMD 206 (263)
T ss_pred --------ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh-------hccc-ccc------cccCCCC
Confidence 147999999999888887754 37889999998875432110 0000 000 0112466
Q ss_pred eHHhHHHHHHHhhcCC
Q 026820 150 HVKDVAKAQVLLFETS 165 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~ 165 (232)
.++|+|+.+..++++.
T Consensus 207 ~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 207 DPEDVAAAVLQAIEKE 222 (263)
T ss_pred CHHHHHHHHHHHHhCC
Confidence 8899999999999765
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=5.7e-06 Score=64.53 Aligned_cols=148 Identities=17% Similarity=0.081 Sum_probs=91.3
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ....++..+.+++|+.++..+++++. +.+..++|++||...+.+...
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~------------ 153 (253)
T PRK06172 86 DYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPK------------ 153 (253)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCC------------
Confidence 789999997532 11123345678899999987776543 344468999999744322111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...|.+.+.++.+. ++++.++.||.+-.+...............+....+ ...+
T Consensus 154 ---------~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~ 218 (253)
T PRK06172 154 ---------MSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHP------VGRI 218 (253)
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCC------CCCc
Confidence 1489999999999999887654 799999999988544321100001111111111111 1135
Q ss_pred eeHHhHHHHHHHhhcCC--CCCceE-EEec
Q 026820 149 VHVKDVAKAQVLLFETS--AASGRY-LCTN 175 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~~~-~~~~ 175 (232)
...+|+++.+..++... ..+|.+ .++|
T Consensus 219 ~~p~~ia~~~~~l~~~~~~~~~G~~i~~dg 248 (253)
T PRK06172 219 GKVEEVASAVLYLCSDGASFTTGHALMVDG 248 (253)
T ss_pred cCHHHHHHHHHHHhCccccCcCCcEEEECC
Confidence 67999999999998653 345643 4444
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=6e-06 Score=66.01 Aligned_cols=127 Identities=11% Similarity=0.041 Sum_probs=84.1
Q ss_pred CeEEEeecCCCCCCCC------CchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLDDPK------DPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~------~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||........ ......+++|+.++.++++++. +.+..++|++||.+. +....
T Consensus 119 d~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~-~~~~~----------- 186 (293)
T PRK05866 119 DILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGV-LSEAS----------- 186 (293)
T ss_pred CEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhh-cCCCC-----------
Confidence 7899999986541111 1234678899999888887654 456679999998633 21110
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
+. .+.|+.+|...+.+++.++.+ .++.+++++||.+-.+..... .. . ....
T Consensus 187 ---p~-----~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~-----------~~-----~--~~~~ 240 (293)
T PRK05866 187 ---PL-----FSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT-----------KA-----Y--DGLP 240 (293)
T ss_pred ---CC-----cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc-----------cc-----c--cCCC
Confidence 00 147999999999998887654 389999999997744321100 00 0 0113
Q ss_pred ceeHHhHHHHHHHhhcCC
Q 026820 148 AVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~ 165 (232)
.+..+++|+.++.++.+.
T Consensus 241 ~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 241 ALTADEAAEWMVTAARTR 258 (293)
T ss_pred CCCHHHHHHHHHHHHhcC
Confidence 467999999999999754
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.43 E-value=6.3e-06 Score=64.92 Aligned_cols=134 Identities=15% Similarity=0.025 Sum_probs=83.7
Q ss_pred CeEEEeecCCCCCCC-CC--------------chhhhHHHHHHHHHHHHHHHHHcC----------CCEEEEecccceec
Q 026820 1 MGVFHLASPNTLDDP-KD--------------PEKELLIPAVQGTLNVLEAAKKFG----------VRRVVLTSSISSIV 55 (232)
Q Consensus 1 D~Vih~a~~~~~~~~-~~--------------~~~~~~~~nv~~~~~l~~~~~~~~----------~~~~i~~Ss~~~~~ 55 (232)
|+|||+||....... .. .....+++|+.++..+++++.... ..++|++||....
T Consensus 86 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~- 164 (267)
T TIGR02685 86 DVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTD- 164 (267)
T ss_pred eEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhcc-
Confidence 799999997543111 11 134668999999999988764321 1257777764221
Q ss_pred cCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHH
Q 026820 56 PNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQR 132 (232)
Q Consensus 56 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~ 132 (232)
.. . .. ...|+.+|...|.+.+.++.+ .|+++++++||.+..+.... ......
T Consensus 165 --~~------~------~~------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-----~~~~~~ 219 (267)
T TIGR02685 165 --QP------L------LG------FTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-----FEVQED 219 (267)
T ss_pred --CC------C------cc------cchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-----hhHHHH
Confidence 00 0 01 148999999999999998765 58999999999986553221 111111
Q ss_pred HHhCCCCccCCcccCceeHHhHHHHHHHhhcCC
Q 026820 133 LLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 133 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 165 (232)
+....+ . ...+...+|++++++.++...
T Consensus 220 ~~~~~~--~---~~~~~~~~~va~~~~~l~~~~ 247 (267)
T TIGR02685 220 YRRKVP--L---GQREASAEQIADVVIFLVSPK 247 (267)
T ss_pred HHHhCC--C---CcCCCCHHHHHHHHHHHhCcc
Confidence 111111 1 112467899999999988654
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=6.9e-06 Score=69.67 Aligned_cols=146 Identities=20% Similarity=0.083 Sum_probs=90.4
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHcC----CCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKFG----VRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~----~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ......+..+++|+.++.++.+++.... -.++|++||.+.+++...
T Consensus 286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~------------- 352 (450)
T PRK08261 286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRG------------- 352 (450)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCC-------------
Confidence 7899999976431 1123346778899999999999987632 258999999755444322
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.++..++.+ .++.+.++.||.+-.+... ............. +......
T Consensus 353 --------~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~----~~~~~~~~~~~~~-----~~l~~~~ 415 (450)
T PRK08261 353 --------QTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTA----AIPFATREAGRRM-----NSLQQGG 415 (450)
T ss_pred --------ChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhh----ccchhHHHHHhhc-----CCcCCCC
Confidence 147999999888888777643 4899999999987422111 0111111111111 0011223
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
-.+|+++++..++... ..+|. +.++|.
T Consensus 416 ~p~dva~~~~~l~s~~~~~itG~~i~v~g~ 445 (450)
T PRK08261 416 LPVDVAETIAWLASPASGGVTGNVVRVCGQ 445 (450)
T ss_pred CHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence 4679999999888542 23453 345443
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.1e-06 Score=66.10 Aligned_cols=147 Identities=15% Similarity=0.072 Sum_probs=91.8
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||...... ..+..+..+++|+.++..+.+++.. .+ -.++|++||.....+...
T Consensus 85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------------ 152 (251)
T PRK12481 85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR------------ 152 (251)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC------------
Confidence 79999999865311 1233466788999998888887643 22 248999999744322111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+-.+.... ..........+.... +. ..+
T Consensus 153 ---------~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~-~~~~~~~~~~~~~~~----p~--~~~ 216 (251)
T PRK12481 153 ---------VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAA-LRADTARNEAILERI----PA--SRW 216 (251)
T ss_pred ---------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhh-cccChHHHHHHHhcC----CC--CCC
Confidence 037999999999999888764 48999999999985442111 000111111222111 11 135
Q ss_pred eeHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 149 VHVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
...+|+++++..++.. ...+|. ..+.|
T Consensus 217 ~~peeva~~~~~L~s~~~~~~~G~~i~vdg 246 (251)
T PRK12481 217 GTPDDLAGPAIFLSSSASDYVTGYTLAVDG 246 (251)
T ss_pred cCHHHHHHHHHHHhCccccCcCCceEEECC
Confidence 6799999999999864 334453 34443
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=7.3e-06 Score=63.24 Aligned_cols=143 Identities=18% Similarity=0.118 Sum_probs=89.4
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cC--CCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FG--VRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||...... ..+..+..+.+|+.++..+.+++.. .+ ..++|++||.....+.+.
T Consensus 76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~----------- 144 (236)
T PRK06483 76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDK----------- 144 (236)
T ss_pred cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCC-----------
Confidence 78999999754311 1223466778899988877766643 22 347999998633111110
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...|.+++.++.+. ++++.+++||.+.-.... ............+ . . -+
T Consensus 145 ----------~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~-----~~~~~~~~~~~~~--~---~-~~ 203 (236)
T PRK06483 145 ----------HIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD-----DAAYRQKALAKSL--L---K-IE 203 (236)
T ss_pred ----------CccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC-----CHHHHHHHhccCc--c---c-cC
Confidence 1479999999999999988764 689999999988422111 1111112222111 1 1 13
Q ss_pred eeHHhHHHHHHHhhcCCCCCce-EEEec
Q 026820 149 VHVKDVAKAQVLLFETSAASGR-YLCTN 175 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~~~~-~~~~~ 175 (232)
...+|+++++..++.....+|. +.+.|
T Consensus 204 ~~~~~va~~~~~l~~~~~~~G~~i~vdg 231 (236)
T PRK06483 204 PGEEEIIDLVDYLLTSCYVTGRSLPVDG 231 (236)
T ss_pred CCHHHHHHHHHHHhcCCCcCCcEEEeCc
Confidence 4689999999999975555664 44443
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.1e-05 Score=63.36 Aligned_cols=142 Identities=13% Similarity=0.046 Sum_probs=86.3
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHH----HHHcC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEA----AKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||....... .+..+..++.|+.+...++++ +.+.+ -.++|++||.....+.
T Consensus 87 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~-------------- 152 (261)
T PRK08936 87 DVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPW-------------- 152 (261)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCC--------------
Confidence 789999998654111 123346688998877665544 44443 2589999986321110
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
.. ...|+.+|...+.+.+.++.+ .++++++++||.+..+....... .......+....+ ...+
T Consensus 153 -~~------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~ 218 (261)
T PRK08936 153 -PL------FVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFA-DPKQRADVESMIP------MGYI 218 (261)
T ss_pred -CC------CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccC-CHHHHHHHHhcCC------CCCC
Confidence 01 147999998888887777654 38999999999997764322111 1111112211111 1236
Q ss_pred eeHHhHHHHHHHhhcCC--CCCce
Q 026820 149 VHVKDVAKAQVLLFETS--AASGR 170 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~~ 170 (232)
...+|+++.+..++... ..+|.
T Consensus 219 ~~~~~va~~~~~l~s~~~~~~~G~ 242 (261)
T PRK08936 219 GKPEEIAAVAAWLASSEASYVTGI 242 (261)
T ss_pred cCHHHHHHHHHHHcCcccCCccCc
Confidence 67899999999988643 33454
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.8e-06 Score=66.77 Aligned_cols=94 Identities=15% Similarity=0.125 Sum_probs=68.2
Q ss_pred CeEEEeecCCCCC-------------CCCCchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccceeccCCCCCCC
Q 026820 1 MGVFHLASPNTLD-------------DPKDPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQG 63 (232)
Q Consensus 1 D~Vih~a~~~~~~-------------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~ 63 (232)
|+|||+||..... ...+..+..++.|+.++..+++++... +..++|++||.....+...
T Consensus 79 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---- 154 (266)
T PRK06171 79 DGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG---- 154 (266)
T ss_pred CEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC----
Confidence 7899999975321 111223567889999999999887642 3357999999744332211
Q ss_pred CccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCee
Q 026820 64 KVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSL 115 (232)
Q Consensus 64 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~ 115 (232)
...|+.+|...+.+++.++.+ .|+++.+++||.+-
T Consensus 155 -----------------~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 155 -----------------QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred -----------------CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 148999999999999888764 48999999999874
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.5e-05 Score=60.97 Aligned_cols=123 Identities=11% Similarity=0.061 Sum_probs=83.6
Q ss_pred CeEEEeecCCCCC------CCCCchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD------DPKDPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||++|..... ...++.+..++.|+.++.++++++... +-.++|++||....++....
T Consensus 72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~----------- 140 (222)
T PRK06953 72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATG----------- 140 (222)
T ss_pred CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccC-----------
Confidence 7899999986321 122345778899999999999998642 22478999986454442210
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc-CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN-GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
.+. ..|+.+|...+.+++.++.+. +++++.++|+.+..+... . ...+.
T Consensus 141 -~~~------~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------~---------~~~~~ 189 (222)
T PRK06953 141 -TTG------WLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------A---------QAALD 189 (222)
T ss_pred -CCc------cccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------C---------CCCCC
Confidence 010 269999999999999877654 788999999988654211 0 12345
Q ss_pred HHhHHHHHHHhhcCC
Q 026820 151 VKDVAKAQVLLFETS 165 (232)
Q Consensus 151 v~D~a~~~~~~~~~~ 165 (232)
.++.+..+..++...
T Consensus 190 ~~~~~~~~~~~~~~~ 204 (222)
T PRK06953 190 PAQSVAGMRRVIAQA 204 (222)
T ss_pred HHHHHHHHHHHHHhc
Confidence 778888888776543
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.1e-05 Score=63.15 Aligned_cols=138 Identities=17% Similarity=0.077 Sum_probs=85.7
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..+++|+.+...+.+++ ++.+-.++|++||.....+.+
T Consensus 98 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------- 163 (256)
T PRK12859 98 HILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMV-------------- 163 (256)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCC--------------
Confidence 7899999975431 111123456889999888886554 333335899999973311110
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
. ...|+.+|...+.+.+.++.+ .++.++.++||.+-.+... ......+.... + ...+.
T Consensus 164 -~------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~------~~~~~~~~~~~----~--~~~~~ 224 (256)
T PRK12859 164 -G------ELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT------EEIKQGLLPMF----P--FGRIG 224 (256)
T ss_pred -C------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC------HHHHHHHHhcC----C--CCCCc
Confidence 1 148999999999998887765 4899999999988543211 11111111111 1 11245
Q ss_pred eHHhHHHHHHHhhcCC--CCCceE
Q 026820 150 HVKDVAKAQVLLFETS--AASGRY 171 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~~ 171 (232)
..+|+++++..++... ..+|.+
T Consensus 225 ~~~d~a~~~~~l~s~~~~~~~G~~ 248 (256)
T PRK12859 225 EPKDAARLIKFLASEEAEWITGQI 248 (256)
T ss_pred CHHHHHHHHHHHhCccccCccCcE
Confidence 6899999999988653 234544
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.6e-05 Score=62.90 Aligned_cols=142 Identities=20% Similarity=0.214 Sum_probs=88.8
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||........ +..+..+++|+.++.++++++... +-.++|++||.... ... +.
T Consensus 92 d~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~--~~~-----------~~ 158 (273)
T PRK08278 92 DICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNL--DPK-----------WF 158 (273)
T ss_pred CEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhc--ccc-----------cc
Confidence 7899999986542212 223567789999999999998632 23478888875221 000 00
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
.+. +.|+.+|...|.+++.++.+. ++.++.+.|+.++... .......+. .....+.
T Consensus 159 ~~~------~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~----------~~~~~~~~~-----~~~~~~~ 217 (273)
T PRK08278 159 APH------TAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA----------AVRNLLGGD-----EAMRRSR 217 (273)
T ss_pred CCc------chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH----------HHHhccccc-----ccccccC
Confidence 111 489999999999999987654 7899999988432111 111111111 0112356
Q ss_pred eHHhHHHHHHHhhcCCC--CCceEEEecC
Q 026820 150 HVKDVAKAQVLLFETSA--ASGRYLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~~~~~~~~ 176 (232)
..+|++++++.++.... .+|.++..++
T Consensus 218 ~p~~va~~~~~l~~~~~~~~~G~~~~~~~ 246 (273)
T PRK08278 218 TPEIMADAAYEILSRPAREFTGNFLIDEE 246 (273)
T ss_pred CHHHHHHHHHHHhcCccccceeEEEeccc
Confidence 78999999999886543 3455554443
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=8.3e-06 Score=65.83 Aligned_cols=108 Identities=19% Similarity=0.066 Sum_probs=73.4
Q ss_pred CeEEEeecCCCCC---CCCCchhhhHHHHHHHHHHHHHHHHH---cCCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLD---DPKDPEKELLIPAVQGTLNVLEAAKK---FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~---~~~~~~~~~~~~nv~~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|++||+||..... ...+..+..+.+|+.+...+.+.+.. .+..++|++||.+..++.... ..+.++....+
T Consensus 95 D~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~---~~~~~~~~~~~ 171 (313)
T PRK05854 95 HLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINW---DDLNWERSYAG 171 (313)
T ss_pred cEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCc---ccccccccCcc
Confidence 7899999986541 23345577889999998888777652 233589999998554442211 11222222222
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCeeCC
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK-----NGTDVVAIHPATSLGP 117 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~ 117 (232)
...|+.||...+.+...++++ .++.+..+.||.+-.+
T Consensus 172 ------~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 172 ------MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred ------hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 258999999999999888753 3799999999988543
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.7e-05 Score=70.48 Aligned_cols=126 Identities=15% Similarity=0.070 Sum_probs=86.0
Q ss_pred CeEEEeecCCCCCC---C---CCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLDD---P---KDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~~---~---~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||...... . .+.....+.+|+.++.++++++ ++.+..++|++||.++ +....
T Consensus 450 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~-~~~~~----------- 517 (657)
T PRK07201 450 DYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGV-QTNAP----------- 517 (657)
T ss_pred CEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhh-cCCCC-----------
Confidence 78999999753211 1 1234677899999988887765 3445679999999744 22111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
. .+.|+.+|...+.+.+.++.+ .++.+++++||.+..+...+.. . + ....
T Consensus 518 ----~-----~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~-----------~-----~--~~~~ 570 (657)
T PRK07201 518 ----R-----FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK-----------R-----Y--NNVP 570 (657)
T ss_pred ----C-----cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc-----------c-----c--cCCC
Confidence 0 147999999999999887754 4899999999999765322110 0 0 0113
Q ss_pred ceeHHhHHHHHHHhhcCC
Q 026820 148 AVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~ 165 (232)
.+..+++|+.++..+...
T Consensus 571 ~~~~~~~a~~i~~~~~~~ 588 (657)
T PRK07201 571 TISPEEAADMVVRAIVEK 588 (657)
T ss_pred CCCHHHHHHHHHHHHHhC
Confidence 567999999999877543
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=3.2e-06 Score=65.57 Aligned_cols=95 Identities=15% Similarity=0.012 Sum_probs=65.8
Q ss_pred CeEEEeecCCCCC--C---CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD--D---PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~--~---~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||..... . ..+.....+.+|+.++..+.+.+. +.+..++|++||.+...+..
T Consensus 79 ~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------- 145 (243)
T PRK07023 79 VLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYA------------- 145 (243)
T ss_pred eEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCC-------------
Confidence 5799999976431 1 112235677899999766665554 33456899999974321110
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH--cCCcEEEEcCCCeeC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK--NGTDVVAIHPATSLG 116 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~~~~~ilR~~~i~G 116 (232)
+ ...|+.+|...|.+++.++.+ .++++.+++|+.+-.
T Consensus 146 --~------~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 146 --G------WSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDT 184 (243)
T ss_pred --C------chHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcccc
Confidence 1 148999999999999988754 489999999998743
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=5.4e-05 Score=59.82 Aligned_cols=147 Identities=14% Similarity=0.102 Sum_probs=90.2
Q ss_pred CeEEEeecCCCC--------CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL--------DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||.... ....+..+..+++|+.++.++++++... .-.++|++||.+...+.+
T Consensus 87 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~------------ 154 (271)
T PRK06505 87 DFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMP------------ 154 (271)
T ss_pred CEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCC------------
Confidence 799999997532 1112234567789999999888876532 114799999874322111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
. ...|+.+|...+.+.+.++.+ .|+++..+.||.+-.+.... ...............+ . .-
T Consensus 155 ----~-----~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~-~~~~~~~~~~~~~~~p--~----~r 218 (271)
T PRK06505 155 ----N-----YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAG-IGDARAIFSYQQRNSP--L----RR 218 (271)
T ss_pred ----c-----cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccccccc-CcchHHHHHHHhhcCC--c----cc
Confidence 1 147999999999999888765 48999999999986543211 1000011111111111 1 12
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
+...+|++++++.++... ..+|. ..+++
T Consensus 219 ~~~peeva~~~~fL~s~~~~~itG~~i~vdg 249 (271)
T PRK06505 219 TVTIDEVGGSALYLLSDLSSGVTGEIHFVDS 249 (271)
T ss_pred cCCHHHHHHHHHHHhCccccccCceEEeecC
Confidence 456899999999988643 34554 34544
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=4.2e-05 Score=60.06 Aligned_cols=150 Identities=13% Similarity=0.036 Sum_probs=87.0
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ........++.|+.+...+++++ ++.+..++|++||.....+.+.
T Consensus 89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 155 (265)
T PRK07062 89 DMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPH------------- 155 (265)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCC-------------
Confidence 78999999754311 11134566778877766666554 3344468999999744221111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC-------ChhHHHHHHHHhCCCCccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV-------NASGAVLQRLLQGSKDTQE 142 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 142 (232)
...|+.+|...+.+.+.++.+ .|+++++++||.+-.+...... .....+...+...... +
T Consensus 156 --------~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p 225 (265)
T PRK07062 156 --------MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGI--P 225 (265)
T ss_pred --------chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCC--C
Confidence 137999999998888877654 4899999999988654211100 0001111111111101 0
Q ss_pred CcccCceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 143 HYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
..-+...+|+++++..++... ..+|. +.++|
T Consensus 226 --~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdg 259 (265)
T PRK07062 226 --LGRLGRPDEAARALFFLASPLSSYTTGSHIDVSG 259 (265)
T ss_pred --cCCCCCHHHHHHHHHHHhCchhcccccceEEEcC
Confidence 113567899999999988642 34553 44443
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.2e-05 Score=61.07 Aligned_cols=142 Identities=17% Similarity=0.023 Sum_probs=81.8
Q ss_pred eEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHH----HHc-CCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 2 GVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAA----KKF-GVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 2 ~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
++||+||.... ..........+++|+.+...+++.+ ++. +.+++|++||.... ..
T Consensus 83 ~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-~~-------------- 147 (251)
T PRK06924 83 HLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK-NP-------------- 147 (251)
T ss_pred EEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc-CC--------------
Confidence 57888887543 1112223456677888766666554 333 33589999986331 10
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCeeCCCCCC---CCChhHHHHHHHHhCCCCccCC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK-----NGTDVVAIHPATSLGPFPQP---YVNASGAVLQRLLQGSKDTQEH 143 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 143 (232)
..+ ...|+.+|...|.+++.++.+ .++++..++||.+-.+.... ........+..+.... +
T Consensus 148 ~~~------~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~- 216 (251)
T PRK06924 148 YFG------WSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLK----E- 216 (251)
T ss_pred CCC------cHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHh----h-
Confidence 011 158999999999999888754 36889999999775332100 0000000011111100 0
Q ss_pred cccCceeHHhHHHHHHHhhcC-CCCCce
Q 026820 144 YWLGAVHVKDVAKAQVLLFET-SAASGR 170 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~-~~~~~~ 170 (232)
..-+..++|+|+.++.++.. ....|.
T Consensus 217 -~~~~~~~~dva~~~~~l~~~~~~~~G~ 243 (251)
T PRK06924 217 -EGKLLSPEYVAKALRNLLETEDFPNGE 243 (251)
T ss_pred -cCCcCCHHHHHHHHHHHHhcccCCCCC
Confidence 11367899999999999876 444454
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=4.1e-05 Score=60.97 Aligned_cols=144 Identities=18% Similarity=0.138 Sum_probs=90.4
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cC------CCEEEEecccceeccCCCCCCCCcc
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FG------VRRVVLTSSISSIVPNPNWPQGKVI 66 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~------~~~~i~~Ss~~~~~~~~~~~~~~~~ 66 (232)
|++||+||..... ...+.....+++|+.++..+++++.. .+ -.++|++||.+...+.+.
T Consensus 94 d~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~------- 166 (286)
T PRK07791 94 DVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVG------- 166 (286)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCCC-------
Confidence 7899999986431 11233467789999999888877642 11 137999999755433221
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCC
Q 026820 67 DETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEH 143 (232)
Q Consensus 67 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (232)
...|+.+|...+.+.+.++.+ .|+++..+.|+ +..+ ............. +.
T Consensus 167 --------------~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~-------~~~~~~~~~~~~~----~~ 220 (286)
T PRK07791 167 --------------QGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTR-------MTETVFAEMMAKP----EE 220 (286)
T ss_pred --------------chhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCC-------cchhhHHHHHhcC----cc
Confidence 147999999999998887765 48999999997 4211 1111111111111 11
Q ss_pred cccCceeHHhHHHHHHHhhcC--CCCCce-EEEecCc
Q 026820 144 YWLGAVHVKDVAKAQVLLFET--SAASGR-YLCTNGI 177 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~~ 177 (232)
....+...+|++++++.++.. ...+|. +.+.|..
T Consensus 221 ~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~ 257 (286)
T PRK07791 221 GEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK 257 (286)
T ss_pred cccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence 112356799999999998864 334565 3555543
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=6.8e-05 Score=58.79 Aligned_cols=147 Identities=13% Similarity=0.070 Sum_probs=90.9
Q ss_pred CeEEEeecCCCC--------CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL--------DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||.... ....+..+..+++|+.+...+++++... .-.++|++||.+...+.
T Consensus 90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~------------- 156 (258)
T PRK07533 90 DFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVV------------- 156 (258)
T ss_pred CEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCC-------------
Confidence 789999997532 1112234678899999999999886542 11478999986331110
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
+. ...|+.+|...+.+.+.++.+ .|+.+..+.||.+-.+-... ..........+....+ ...
T Consensus 157 ---~~-----~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p------~~r 221 (258)
T PRK07533 157 ---EN-----YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG-IDDFDALLEDAAERAP------LRR 221 (258)
T ss_pred ---cc-----chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc-cCCcHHHHHHHHhcCC------cCC
Confidence 11 147999999999998887764 48999999999885542111 1111122222222111 113
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
+...+|++++++.++... ..+|. +.+.+
T Consensus 222 ~~~p~dva~~~~~L~s~~~~~itG~~i~vdg 252 (258)
T PRK07533 222 LVDIDDVGAVAAFLASDAARRLTGNTLYIDG 252 (258)
T ss_pred CCCHHHHHHHHHHHhChhhccccCcEEeeCC
Confidence 567899999999998653 34554 34443
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.21 E-value=2.4e-05 Score=61.29 Aligned_cols=147 Identities=12% Similarity=0.048 Sum_probs=90.1
Q ss_pred CeEEEeecCCCC--------CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL--------DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||.... ....+..+..++.|+.++..+++++... .-.++|++||.+...+.
T Consensus 89 D~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~------------- 155 (258)
T PRK07370 89 DILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAI------------- 155 (258)
T ss_pred CEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCC-------------
Confidence 789999997531 1112233667789999999888876532 12489999987432111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
+. ...|+.+|...+.+.+.++.+. |+.+.++.||.+-.+.... ..........+....+ ..-
T Consensus 156 ---~~-----~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~-~~~~~~~~~~~~~~~p------~~r 220 (258)
T PRK07370 156 ---PN-----YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSA-VGGILDMIHHVEEKAP------LRR 220 (258)
T ss_pred ---cc-----cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhc-cccchhhhhhhhhcCC------cCc
Confidence 11 1479999999999999987653 7999999999986542110 0001111111111111 113
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
+...+|+++++..++... ..+|. ..+.+
T Consensus 221 ~~~~~dva~~~~fl~s~~~~~~tG~~i~vdg 251 (258)
T PRK07370 221 TVTQTEVGNTAAFLLSDLASGITGQTIYVDA 251 (258)
T ss_pred CCCHHHHHHHHHHHhChhhccccCcEEEECC
Confidence 566899999999998643 23453 34443
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=6.3e-05 Score=59.05 Aligned_cols=147 Identities=12% Similarity=0.069 Sum_probs=89.8
Q ss_pred CeEEEeecCCCCC---------CCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTLD---------DPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|++||+||..... ...+..+..+++|+.+...+++++... +-.++|++||.+...+.+
T Consensus 86 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~----------- 154 (260)
T PRK06997 86 DGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVP----------- 154 (260)
T ss_pred cEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCC-----------
Confidence 7999999985421 011223456789999999888887643 224799999874321111
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
. ...|+.+|...+.+.+.++.+ .|+.+..+.||.+-.+-... ..........+.... + ..
T Consensus 155 -----~-----~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~~~~~~~~~~~~~~----p--~~ 217 (260)
T PRK06997 155 -----N-----YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG-IKDFGKILDFVESNA----P--LR 217 (260)
T ss_pred -----C-----cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc-ccchhhHHHHHHhcC----c--cc
Confidence 1 147999999999999988765 48999999999885432110 000011111111111 1 11
Q ss_pred CceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 147 GAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
-+...+|+++++..++... ..+|. +.+.|
T Consensus 218 r~~~pedva~~~~~l~s~~~~~itG~~i~vdg 249 (260)
T PRK06997 218 RNVTIEEVGNVAAFLLSDLASGVTGEITHVDS 249 (260)
T ss_pred ccCCHHHHHHHHHHHhCccccCcceeEEEEcC
Confidence 2567999999999998653 34453 34443
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.5e-05 Score=61.25 Aligned_cols=147 Identities=15% Similarity=-0.009 Sum_probs=86.0
Q ss_pred CeEEEeecCCCC----------CCCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCcc
Q 026820 1 MGVFHLASPNTL----------DDPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVI 66 (232)
Q Consensus 1 D~Vih~a~~~~~----------~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~ 66 (232)
|++||+||.... ..........+..|+.+...+.+++ .+.+..++|++||.+...+.+.
T Consensus 89 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------- 161 (260)
T PRK08416 89 DFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIEN------- 161 (260)
T ss_pred cEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCC-------
Confidence 789999986421 0001123456677777766655554 3334458999999633211111
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCC
Q 026820 67 DETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEH 143 (232)
Q Consensus 67 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (232)
...|+.+|...+.+++.++.+. |+++.++.||.+-.+.... ...............+
T Consensus 162 --------------~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~-~~~~~~~~~~~~~~~~----- 221 (260)
T PRK08416 162 --------------YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKA-FTNYEEVKAKTEELSP----- 221 (260)
T ss_pred --------------cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhh-ccCCHHHHHHHHhcCC-----
Confidence 0379999999999999988764 8999999999874332110 0011111111111111
Q ss_pred cccCceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 144 YWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
..-+...+|++.+++.++... ..+|. +.+++
T Consensus 222 -~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdg 255 (260)
T PRK08416 222 -LNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDG 255 (260)
T ss_pred -CCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcC
Confidence 113667999999999988643 23454 34544
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.4e-05 Score=64.79 Aligned_cols=125 Identities=16% Similarity=0.057 Sum_probs=83.8
Q ss_pred CeEEEeecCCCC------CCCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL------DDPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||.... ....+.....+++|+.++..+.+++. +.+..++|++||.++......
T Consensus 134 dilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~----------- 202 (320)
T PLN02780 134 GVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSD----------- 202 (320)
T ss_pred cEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCC-----------
Confidence 589999998632 11112235678999999998888864 345568999999744221100
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
|. ...|+.||...+.+.+.++.+. |++++++.||.+-.+-... ... ...
T Consensus 203 ---p~-----~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~-------------~~~-------~~~ 254 (320)
T PLN02780 203 ---PL-----YAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI-------------RRS-------SFL 254 (320)
T ss_pred ---cc-----chHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc-------------cCC-------CCC
Confidence 11 1589999999999998887653 8999999999885432110 000 111
Q ss_pred ceeHHhHHHHHHHhhcC
Q 026820 148 AVHVKDVAKAQVLLFET 164 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~ 164 (232)
....+++|+.++..+..
T Consensus 255 ~~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 255 VPSSDGYARAALRWVGY 271 (320)
T ss_pred CCCHHHHHHHHHHHhCC
Confidence 34689999999998853
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=1e-05 Score=62.45 Aligned_cols=131 Identities=23% Similarity=0.237 Sum_probs=83.4
Q ss_pred CeEEEeecCCCCCCCC--CchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTLDDPK--DPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~--~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~ 76 (232)
|.++|+++........ +.....++.|+.+...+++.+... .-.++|++||....++.. .+.
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~--------------~~~- 147 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKAS--------------PDQ- 147 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCC--------------CCc-
Confidence 6789998864321111 223456788888888888776543 124799999864322110 011
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHh
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKD 153 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 153 (232)
..|+.+|...+.+++.+..+ .+++++++||+.++++.... . .... . ......++..+|
T Consensus 148 -----~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~-----~-~~~~-~-------~~~~~~~~~~~~ 208 (238)
T PRK05786 148 -----LSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE-----R-NWKK-L-------RKLGDDMAPPED 208 (238)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch-----h-hhhh-h-------ccccCCCCCHHH
Confidence 47999999999888887755 38999999999999864211 0 0010 0 011113567899
Q ss_pred HHHHHHHhhcCC
Q 026820 154 VAKAQVLLFETS 165 (232)
Q Consensus 154 ~a~~~~~~~~~~ 165 (232)
+++++..++..+
T Consensus 209 va~~~~~~~~~~ 220 (238)
T PRK05786 209 FAKVIIWLLTDE 220 (238)
T ss_pred HHHHHHHHhccc
Confidence 999999998653
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=4.6e-05 Score=59.86 Aligned_cols=147 Identities=14% Similarity=0.083 Sum_probs=87.5
Q ss_pred CeEEEeecCCCCC----C--CCC---chhhhHHHHHHHHHHHHHHHHH---cCCCEEEEecccceeccCCCCCCCCccCC
Q 026820 1 MGVFHLASPNTLD----D--PKD---PEKELLIPAVQGTLNVLEAAKK---FGVRRVVLTSSISSIVPNPNWPQGKVIDE 68 (232)
Q Consensus 1 D~Vih~a~~~~~~----~--~~~---~~~~~~~~nv~~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E 68 (232)
|++||+||..... . ... ..+..+++|+.+...+.+++.. .+-.++|++||.+...+.+.
T Consensus 86 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~--------- 156 (261)
T PRK08690 86 DGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPN--------- 156 (261)
T ss_pred cEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCC---------
Confidence 7999999986431 0 011 1234457788888777776532 12247999998744221111
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcc
Q 026820 69 TSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+-.+.... ..........+....+ .
T Consensus 157 ------------~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~-~~~~~~~~~~~~~~~p------~ 217 (261)
T PRK08690 157 ------------YNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG-IADFGKLLGHVAAHNP------L 217 (261)
T ss_pred ------------cccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc-CCchHHHHHHHhhcCC------C
Confidence 147999999999998887653 48999999999985432111 1011111122211111 1
Q ss_pred cCceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 146 LGAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
..+...+|+|+++..++... ..+|. +.++|
T Consensus 218 ~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdg 250 (261)
T PRK08690 218 RRNVTIEEVGNTAAFLLSDLSSGITGEITYVDG 250 (261)
T ss_pred CCCCCHHHHHHHHHHHhCcccCCcceeEEEEcC
Confidence 13667999999999999743 33454 34443
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=6.2e-05 Score=58.79 Aligned_cols=136 Identities=14% Similarity=0.067 Sum_probs=86.5
Q ss_pred CeEEEeecCCCC--------CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL--------DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||.... ....+..+..++.|+.+...+++++... .-.++|++||.+...+.
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~------------- 151 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAI------------- 151 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccC-------------
Confidence 799999997532 1111234567788999988888877543 12479999986431111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
+. ...|+.+|...+.+.+.++.+ .|+.+.++.||.+-.+.... ..........+....+ ...
T Consensus 152 ---~~-----~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~-~~~~~~~~~~~~~~~p------~~r 216 (252)
T PRK06079 152 ---PN-----YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTG-IKGHKDLLKESDSRTV------DGV 216 (252)
T ss_pred ---Cc-----chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccc-CCChHHHHHHHHhcCc------ccC
Confidence 11 147999999999999988765 48999999999986542211 1111122222222111 113
Q ss_pred ceeHHhHHHHHHHhhcC
Q 026820 148 AVHVKDVAKAQVLLFET 164 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~ 164 (232)
+...+|+++++..++..
T Consensus 217 ~~~pedva~~~~~l~s~ 233 (252)
T PRK06079 217 GVTIEEVGNTAAFLLSD 233 (252)
T ss_pred CCCHHHHHHHHHHHhCc
Confidence 66789999999999865
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=8.1e-05 Score=58.32 Aligned_cols=147 Identities=16% Similarity=0.107 Sum_probs=87.5
Q ss_pred CeEEEeecCCCC--------CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL--------DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||.... ....+.....+++|+.+...+++++... .-.++|++||.....+.+.
T Consensus 89 d~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~----------- 157 (257)
T PRK08594 89 HGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQN----------- 157 (257)
T ss_pred cEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCC-----------
Confidence 789999987531 0111122345678888888887776543 1248999998744211110
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+.+.++.+ .|+.+..+.||.+-.+.... ..........+.... + ...
T Consensus 158 ----------~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~----p--~~r 220 (257)
T PRK08594 158 ----------YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKG-VGGFNSILKEIEERA----P--LRR 220 (257)
T ss_pred ----------CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhh-hccccHHHHHHhhcC----C--ccc
Confidence 147999999999999988764 38999999999886432110 000001111111111 1 123
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
+...+|++++++.++... ..+|. ..++|
T Consensus 221 ~~~p~~va~~~~~l~s~~~~~~tG~~~~~dg 251 (257)
T PRK08594 221 TTTQEEVGDTAAFLFSDLSRGVTGENIHVDS 251 (257)
T ss_pred cCCHHHHHHHHHHHcCcccccccceEEEECC
Confidence 567899999999988643 34554 34443
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=9.2e-05 Score=58.12 Aligned_cols=147 Identities=15% Similarity=0.075 Sum_probs=89.9
Q ss_pred CeEEEeecCCCC--------CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL--------DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||.... ....+.....++.|+.+...+++++... .-.++|++||.+...+.+
T Consensus 88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~------------ 155 (260)
T PRK06603 88 DFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIP------------ 155 (260)
T ss_pred cEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCC------------
Confidence 789999987431 1112234567889999999988876432 114899999864321111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
. ...|+.+|...+.+.+.++.+ .|+.+..+.||.+-.+.... ..........+....+ ...
T Consensus 156 ----~-----~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p------~~r 219 (260)
T PRK06603 156 ----N-----YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSA-IGDFSTMLKSHAATAP------LKR 219 (260)
T ss_pred ----c-----ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhc-CCCcHHHHHHHHhcCC------cCC
Confidence 1 147999999999999888764 47999999999885432110 0011111122221111 113
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
+...+|+++++++++... ..+|. +.++|
T Consensus 220 ~~~pedva~~~~~L~s~~~~~itG~~i~vdg 250 (260)
T PRK06603 220 NTTQEDVGGAAVYLFSELSKGVTGEIHYVDC 250 (260)
T ss_pred CCCHHHHHHHHHHHhCcccccCcceEEEeCC
Confidence 567899999999998643 33554 34443
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=5.9e-05 Score=59.07 Aligned_cols=148 Identities=16% Similarity=0.079 Sum_probs=87.7
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||++|..... ...+.....++.|+.+...+++++. +.+..++|++||.....+..
T Consensus 83 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~-------------- 148 (259)
T PRK06125 83 DILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDA-------------- 148 (259)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCC--------------
Confidence 7899999975431 1112335667899999988888763 33334799999863311100
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC-----C--hhHHHHHHHHhCCCCccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV-----N--ASGAVLQRLLQGSKDTQE 142 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~-----~--~~~~~~~~~~~~~~~~~~ 142 (232)
. ...|..+|...+.+.+.++.+ .|+++..+.||.+-.+...... . ........+... .+
T Consensus 149 --~-----~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 217 (259)
T PRK06125 149 --D-----YICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAG----LP 217 (259)
T ss_pred --C-----chHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhcc----CC
Confidence 0 147899999999998887653 4899999999988644210000 0 000011111111 01
Q ss_pred CcccCceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 143 HYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
...+..++|++++++.++... ...|. +.++|
T Consensus 218 --~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdg 251 (259)
T PRK06125 218 --LGRPATPEEVADLVAFLASPRSGYTSGTVVTVDG 251 (259)
T ss_pred --cCCCcCHHHHHHHHHHHcCchhccccCceEEecC
Confidence 113568999999999988643 23453 34443
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.00016 Score=56.86 Aligned_cols=136 Identities=20% Similarity=0.148 Sum_probs=93.2
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH
Q 026820 22 LLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK 101 (232)
Q Consensus 22 ~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 101 (232)
..........+..+.+. .++++++++|...+ .... ...|..+|..+|+.+..
T Consensus 80 ~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~---~~~~--------------------~~~~~~~~~~~e~~l~~---- 131 (275)
T COG0702 80 FRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGA---DAAS--------------------PSALARAKAAVEAALRS---- 131 (275)
T ss_pred hhHHHHHHHHHHHHHhc-CCceEEEEeccCCC---CCCC--------------------ccHHHHHHHHHHHHHHh----
Confidence 44455555556666555 45778999887622 1100 14899999999999664
Q ss_pred cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHhHHHHHHHhhcCCCCCc-eEEEec-Ccc
Q 026820 102 NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQVLLFETSAASG-RYLCTN-GIY 178 (232)
Q Consensus 102 ~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~-~~~ 178 (232)
.+++++++|+..+|..... .. .......+.+.. .+....+++..+|++.++...+..+...+ .|.+.+ +.+
T Consensus 132 sg~~~t~lr~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~ 205 (275)
T COG0702 132 SGIPYTTLRRAAFYLGAGA----AF--IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEAL 205 (275)
T ss_pred cCCCeEEEecCeeeeccch----hH--HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCcee
Confidence 4999999998877754322 11 112223333333 55567799999999999999998876555 575554 679
Q ss_pred cHHHHHHHHHhhC
Q 026820 179 QFAEFAEKVSKLF 191 (232)
Q Consensus 179 s~~el~~~i~~~~ 191 (232)
+..++.+.+....
T Consensus 206 ~~~~~~~~l~~~~ 218 (275)
T COG0702 206 TLAELASGLDYTI 218 (275)
T ss_pred cHHHHHHHHHHHh
Confidence 9999999999887
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.9e-05 Score=69.00 Aligned_cols=96 Identities=16% Similarity=0.029 Sum_probs=68.3
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+.....+++|+.|+.++++++. +.+ -.++|++||.++ +....
T Consensus 394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~-~~~~~------------ 460 (582)
T PRK05855 394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAA-YAPSR------------ 460 (582)
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhh-ccCCC------------
Confidence 78999999865411 122345677899999999888754 333 248999999744 22111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGP 117 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~ 117 (232)
. ...|+.+|...|.+.+.++.+ .|+.++++.||.+-.+
T Consensus 461 --~------~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 501 (582)
T PRK05855 461 --S------LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN 501 (582)
T ss_pred --C------CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence 0 148999999999998887654 4899999999988543
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=98.12 E-value=5.1e-05 Score=59.36 Aligned_cols=136 Identities=17% Similarity=0.048 Sum_probs=81.7
Q ss_pred CeEEEeecCCCCC---CC----CCchhhhHHHHHHHHHHHHHHHHH----c-C-CCEEEEecccceeccCCCCCCCCccC
Q 026820 1 MGVFHLASPNTLD---DP----KDPEKELLIPAVQGTLNVLEAAKK----F-G-VRRVVLTSSISSIVPNPNWPQGKVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~~---~~----~~~~~~~~~~nv~~~~~l~~~~~~----~-~-~~~~i~~Ss~~~~~~~~~~~~~~~~~ 67 (232)
|+|||+||..... .. .+.....+++|+.++..+.+++.. . + -.++|++||.+...+.+.
T Consensus 89 ~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~-------- 160 (256)
T TIGR01500 89 LLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG-------- 160 (256)
T ss_pred EEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC--------
Confidence 3799999974321 11 123357889999998877766543 2 2 247999999744221111
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCC--hhHHHHHHHHhCCCCccC
Q 026820 68 ETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVN--ASGAVLQRLLQGSKDTQE 142 (232)
Q Consensus 68 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~~~ 142 (232)
...|+.+|...+.+.+.++.+ .++.+..+.||.+-.+....... .-......+.... +
T Consensus 161 -------------~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~----~ 223 (256)
T TIGR01500 161 -------------WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELK----A 223 (256)
T ss_pred -------------chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHH----h
Confidence 147999999999999988765 37899999999884331100000 0000000000000 0
Q ss_pred CcccCceeHHhHHHHHHHhhc
Q 026820 143 HYWLGAVHVKDVAKAQVLLFE 163 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~ 163 (232)
...+...+|+|+.++.++.
T Consensus 224 --~~~~~~p~eva~~~~~l~~ 242 (256)
T TIGR01500 224 --KGKLVDPKVSAQKLLSLLE 242 (256)
T ss_pred --cCCCCCHHHHHHHHHHHHh
Confidence 1136789999999999985
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.09 E-value=7.2e-05 Score=64.65 Aligned_cols=137 Identities=18% Similarity=0.103 Sum_probs=85.3
Q ss_pred CeEEEeecCCCC------CCCCCchhhhHHHHHHHHHHHHHHHHHc----CC-CEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTL------DDPKDPEKELLIPAVQGTLNVLEAAKKF----GV-RRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|++||+||.... .......+..+++|+.++..+++++... +- .++|++||.....+.+.
T Consensus 81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~---------- 150 (520)
T PRK06484 81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPK---------- 150 (520)
T ss_pred CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCC----------
Confidence 789999997321 1122334678899999999999887542 22 38999999754332211
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
...|+.+|...+.+.+.++.+ .+++++++.||.+-.+................... .+ ..
T Consensus 151 -----------~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~----~~--~~ 213 (520)
T PRK06484 151 -----------RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSR----IP--LG 213 (520)
T ss_pred -----------CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhc----CC--CC
Confidence 148999999999998887765 38999999999885443211000000000011111 01 11
Q ss_pred CceeHHhHHHHHHHhhcC
Q 026820 147 GAVHVKDVAKAQVLLFET 164 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~ 164 (232)
.+...+|+++++..++..
T Consensus 214 ~~~~~~~va~~v~~l~~~ 231 (520)
T PRK06484 214 RLGRPEEIAEAVFFLASD 231 (520)
T ss_pred CCcCHHHHHHHHHHHhCc
Confidence 345789999999887754
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.9e-05 Score=60.91 Aligned_cols=138 Identities=17% Similarity=0.122 Sum_probs=86.0
Q ss_pred CeEEEeecCCCC-CC----CC----CchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCC
Q 026820 1 MGVFHLASPNTL-DD----PK----DPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDE 68 (232)
Q Consensus 1 D~Vih~a~~~~~-~~----~~----~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E 68 (232)
|++||+||.... .. .. ...+..++.|+.++..+++++... .-.++|++||....++...
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------- 151 (262)
T TIGR03325 81 DCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGG--------- 151 (262)
T ss_pred CEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCC---------
Confidence 789999997432 00 01 123567899999999999988642 1246888888755332211
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCC-CChhH----H-HHHHHHhCCCCc
Q 026820 69 TSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPY-VNASG----A-VLQRLLQGSKDT 140 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~-~~~~~----~-~~~~~~~~~~~~ 140 (232)
...|+.+|...+.+.+.++.+. .+++..+.||.+..+-.... ..... . .........
T Consensus 152 ------------~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 216 (262)
T TIGR03325 152 ------------GPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSV--- 216 (262)
T ss_pred ------------CchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhc---
Confidence 1379999999999999988764 47899999999865432110 00000 0 011111111
Q ss_pred cCCcccCceeHHhHHHHHHHhhcC
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFET 164 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~ 164 (232)
.+ ..-+...+|+++++..++..
T Consensus 217 ~p--~~r~~~p~eva~~~~~l~s~ 238 (262)
T TIGR03325 217 LP--IGRMPDAEEYTGAYVFFATR 238 (262)
T ss_pred CC--CCCCCChHHhhhheeeeecC
Confidence 01 11356789999999998865
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.00016 Score=56.38 Aligned_cols=131 Identities=20% Similarity=0.211 Sum_probs=87.8
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHH----HHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEA----AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...+ ....+...+.+++|+.++..|..+ +.+.+-.++|.++|.++....+.
T Consensus 86 dvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~------------- 152 (265)
T COG0300 86 DVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPY------------- 152 (265)
T ss_pred cEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcc-------------
Confidence 789999999877 233334578889998877766665 44555568999999855222111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
.+.|+.||...--+...+..+ .|+.++.+-||.+.-+.... .+.........+-++
T Consensus 153 --------~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-------------~~~~~~~~~~~~~~~ 211 (265)
T COG0300 153 --------MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-------------KGSDVYLLSPGELVL 211 (265)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-------------cccccccccchhhcc
Confidence 158999999887666665543 48999999999886543220 000000111233578
Q ss_pred eHHhHHHHHHHhhcCC
Q 026820 150 HVKDVAKAQVLLFETS 165 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~ 165 (232)
..+|+|+..+..+.+.
T Consensus 212 ~~~~va~~~~~~l~~~ 227 (265)
T COG0300 212 SPEDVAEAALKALEKG 227 (265)
T ss_pred CHHHHHHHHHHHHhcC
Confidence 8999999999999665
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00015 Score=58.62 Aligned_cols=167 Identities=11% Similarity=-0.048 Sum_probs=88.0
Q ss_pred CeEEEeecCCCCC-----CCCCchhhhHHHHHHHHHHHHHHHH----HcC--CCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTLD-----DPKDPEKELLIPAVQGTLNVLEAAK----KFG--VRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|++||+||..... ...+..+..+++|+.+...+++++. +.+ ..++|++||..............+.+.+
T Consensus 83 D~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~ 162 (314)
T TIGR01289 83 DALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLG 162 (314)
T ss_pred CEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccccc
Confidence 7899999975321 1112335678999999888776654 332 3589999997442111000000000000
Q ss_pred C-------CCC-----cccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHH
Q 026820 70 S-------WTD-----LDFCKSHKIWYSMSKTLAEKAAWEFAEK----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRL 133 (232)
Q Consensus 70 ~-------~~~-----~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 133 (232)
+ +.. ...+......|+.||.....+...++++ .++.++.++||.+...+...........+...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~ 242 (314)
T TIGR01289 163 DLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPP 242 (314)
T ss_pred ccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHH
Confidence 0 000 0000112247999999988887777654 37899999999985433211111111111110
Q ss_pred HhCCCCccCCcccCceeHHhHHHHHHHhhcCCC--CCceEEE
Q 026820 134 LQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSA--ASGRYLC 173 (232)
Q Consensus 134 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~~ 173 (232)
.... ....+...++.++.++.++.... ..|.|..
T Consensus 243 ~~~~------~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~ 278 (314)
T TIGR01289 243 FQKY------ITKGYVSEEEAGERLAQVVSDPKLKKSGVYWS 278 (314)
T ss_pred HHHH------HhccccchhhhhhhhHHhhcCcccCCCceeee
Confidence 0000 01125678899998888776532 3455543
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=2.7e-05 Score=62.63 Aligned_cols=130 Identities=18% Similarity=0.124 Sum_probs=81.6
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc--------C---CCEEEEecccceeccCCCCCCCCc
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF--------G---VRRVVLTSSISSIVPNPNWPQGKV 65 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~--------~---~~~~i~~Ss~~~~~~~~~~~~~~~ 65 (232)
|+|||+||..... .........+++|+.++.++++++... + ..++|++||.+...+...
T Consensus 91 D~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------ 164 (306)
T PRK07792 91 DIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVG------ 164 (306)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCC------
Confidence 7999999986541 112234567889999999999886421 0 137999998744332211
Q ss_pred cCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccC
Q 026820 66 IDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQE 142 (232)
Q Consensus 66 ~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (232)
...|+.+|...+.+.+.++.+ .|+.+.++.|+. ..... .... ...+. ..
T Consensus 165 ---------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~t~~~------~~~~----~~~~~-~~ 216 (306)
T PRK07792 165 ---------------QANYGAAKAGITALTLSAARALGRYGVRANAICPRA--RTAMT------ADVF----GDAPD-VE 216 (306)
T ss_pred ---------------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC--CCchh------hhhc----cccch-hh
Confidence 137999999999998887764 588888888862 11100 0000 00000 00
Q ss_pred CcccCceeHHhHHHHHHHhhcC
Q 026820 143 HYWLGAVHVKDVAKAQVLLFET 164 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~ 164 (232)
......+..+|++.++..++..
T Consensus 217 ~~~~~~~~pe~va~~v~~L~s~ 238 (306)
T PRK07792 217 AGGIDPLSPEHVVPLVQFLASP 238 (306)
T ss_pred hhccCCCCHHHHHHHHHHHcCc
Confidence 0122456899999999888754
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.00018 Score=56.61 Aligned_cols=147 Identities=14% Similarity=0.062 Sum_probs=87.6
Q ss_pred CeEEEeecCCCCCC---------CCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTLDD---------PKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~~~---------~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|++||+||...... ..+..+..+++|+.+...+.+++... .-.++|++||.+...+.
T Consensus 86 D~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~------------ 153 (262)
T PRK07984 86 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI------------ 153 (262)
T ss_pred CEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCC------------
Confidence 79999999753210 11122456688988888888776432 11479999986431111
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
+.. ..|+.+|...+.+.+.++.+ .|+.+.++-||.+--+... ...........+....+ ..
T Consensus 154 ----~~~-----~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~-~~~~~~~~~~~~~~~~p------~~ 217 (262)
T PRK07984 154 ----PNY-----NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS-GIKDFRKMLAHCEAVTP------IR 217 (262)
T ss_pred ----CCc-----chhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHh-cCCchHHHHHHHHHcCC------Cc
Confidence 011 47999999999999988865 4899999999988543111 00011111111111111 11
Q ss_pred CceeHHhHHHHHHHhhcCC--CCCceE-EEec
Q 026820 147 GAVHVKDVAKAQVLLFETS--AASGRY-LCTN 175 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~--~~~~~~-~~~~ 175 (232)
.+...+|+++++++++... ..+|.. .+.+
T Consensus 218 r~~~pedva~~~~~L~s~~~~~itG~~i~vdg 249 (262)
T PRK07984 218 RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDG 249 (262)
T ss_pred CCCCHHHHHHHHHHHcCcccccccCcEEEECC
Confidence 3567899999999998653 344543 4443
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=3.4e-05 Score=60.55 Aligned_cols=138 Identities=19% Similarity=0.096 Sum_probs=85.4
Q ss_pred CeEEEeecCCCC--CCCCCc-------hhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCC
Q 026820 1 MGVFHLASPNTL--DDPKDP-------EKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDE 68 (232)
Q Consensus 1 D~Vih~a~~~~~--~~~~~~-------~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E 68 (232)
|++||+||.... .....+ .+..++.|+.++..+++++... .-.++|++||.+...+...
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------- 152 (263)
T PRK06200 82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGG--------- 152 (263)
T ss_pred CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC---------
Confidence 789999997532 111111 3456788999988888887532 1247999998744322111
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCC-C-------ChhHHHHHHHHhCCC
Q 026820 69 TSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPY-V-------NASGAVLQRLLQGSK 138 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~-~-------~~~~~~~~~~~~~~~ 138 (232)
...|+.+|...+.+++.++.+. ++.+..+.||.+..+..... . ...... .......
T Consensus 153 ------------~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 218 (263)
T PRK06200 153 ------------GPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGL-ADMIAAI- 218 (263)
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccch-hHHhhcC-
Confidence 1379999999999999888754 58999999998865421110 0 000001 1111111
Q ss_pred CccCCcccCceeHHhHHHHHHHhhcCC
Q 026820 139 DTQEHYWLGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 139 ~~~~~~~~~~i~v~D~a~~~~~~~~~~ 165 (232)
.+ ..-+...+|+++++..++...
T Consensus 219 --~p--~~r~~~~~eva~~~~fl~s~~ 241 (263)
T PRK06200 219 --TP--LQFAPQPEDHTGPYVLLASRR 241 (263)
T ss_pred --CC--CCCCCCHHHHhhhhhheeccc
Confidence 00 123667899999999988643
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=5.4e-05 Score=59.52 Aligned_cols=148 Identities=11% Similarity=0.036 Sum_probs=87.7
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHH----HHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEA----AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||..... ...+..+..+++|+.+...++++ +++.+..++|++||.+...+.+
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~-------------- 152 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIP-------------- 152 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCC--------------
Confidence 7899999975431 11233456778887776665555 4445556899999974321111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCC--------CChhHHHHHHHHhCCCCcc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPY--------VNASGAVLQRLLQGSKDTQ 141 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~--------~~~~~~~~~~~~~~~~~~~ 141 (232)
. ...|+.+|...+.+.+.++.+. |+++.++.||.+-.+..... ..........+....
T Consensus 153 --~-----~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 221 (263)
T PRK08339 153 --N-----IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPI---- 221 (263)
T ss_pred --c-----chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccC----
Confidence 0 1379999999999988887653 79999999998854311000 000001111111111
Q ss_pred CCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 142 EHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 142 ~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
+ ..-+...+|+++++..++... ..+|. ..++|
T Consensus 222 p--~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdg 256 (263)
T PRK08339 222 P--LGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDG 256 (263)
T ss_pred C--cccCcCHHHHHHHHHHHhcchhcCccCceEEECC
Confidence 1 113567899999999988643 34554 34443
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00021 Score=57.51 Aligned_cols=164 Identities=15% Similarity=0.006 Sum_probs=86.8
Q ss_pred CeEEEeecCCCCC-----CCCCchhhhHHHHHHHHHHHHHHHH----HcC--CCEEEEecccceeccCC--CCCCCCccC
Q 026820 1 MGVFHLASPNTLD-----DPKDPEKELLIPAVQGTLNVLEAAK----KFG--VRRVVLTSSISSIVPNP--NWPQGKVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~--~~~~i~~Ss~~~~~~~~--~~~~~~~~~ 67 (232)
|++||+||..... ...+..+..+++|+.++..+++++. +.+ ..++|++||.....+.. ..++...+.
T Consensus 77 D~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~ 156 (308)
T PLN00015 77 DVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLG 156 (308)
T ss_pred CEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchh
Confidence 7899999975321 1122345788999999888876643 333 35899999974421100 000000000
Q ss_pred ----------CCCC---CCcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCeeCCCCCCCCChhHHHH
Q 026820 68 ----------ETSW---TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK----NGTDVVAIHPATSLGPFPQPYVNASGAVL 130 (232)
Q Consensus 68 ----------E~~~---~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~ 130 (232)
+... .... .......|+.||...+.....++++ .|+.++.+.||.|...+...........+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~ 235 (308)
T PLN00015 157 DLRGLAGGLNGLNSSAMIDGG-EFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLL 235 (308)
T ss_pred hhhhhhcccCCccchhhcccc-CCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHH
Confidence 0000 0000 0011247999999977776666654 37999999999996433221111111100
Q ss_pred HHHHhCCCCccCCcccCceeHHhHHHHHHHhhcCCC--CCceE
Q 026820 131 QRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSA--ASGRY 171 (232)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~ 171 (232)
....... + ...+...++.|+.++.++.... .+|.|
T Consensus 236 ~~~~~~~----~--~~~~~~pe~~a~~~~~l~~~~~~~~~G~~ 272 (308)
T PLN00015 236 FPPFQKY----I--TKGYVSEEEAGKRLAQVVSDPSLTKSGVY 272 (308)
T ss_pred HHHHHHH----H--hcccccHHHhhhhhhhhccccccCCCccc
Confidence 0000000 0 0124678999999988775432 34555
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.5e-05 Score=60.39 Aligned_cols=147 Identities=12% Similarity=0.073 Sum_probs=89.7
Q ss_pred CeEEEeecCCCC--------CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL--------DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||.... ....+..+..+++|+.+...+.+++... .-.++|++||.+...+.+
T Consensus 85 DilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~------------ 152 (274)
T PRK08415 85 DFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVP------------ 152 (274)
T ss_pred CEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCC------------
Confidence 789999997431 1112234667899999999888877542 124799999864321111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
. ...|+.+|...+.+.+.++.+ .|+.+..+.||.+-.+.... ...... ........ .+ ..-
T Consensus 153 ----~-----~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~~~~-~~~~~~~~---~p--l~r 216 (274)
T PRK08415 153 ----H-----YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASG-IGDFRM-ILKWNEIN---AP--LKK 216 (274)
T ss_pred ----c-----chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhc-cchhhH-Hhhhhhhh---Cc--hhc
Confidence 1 147999999999999988765 48999999999886532110 000000 01110000 01 112
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
+...+|++++++.++... ..+|. ..++|
T Consensus 217 ~~~pedva~~v~fL~s~~~~~itG~~i~vdG 247 (274)
T PRK08415 217 NVSIEEVGNSGMYLLSDLSSGVTGEIHYVDA 247 (274)
T ss_pred cCCHHHHHHHHHHHhhhhhhcccccEEEEcC
Confidence 567899999999998643 34554 34444
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00091 Score=51.99 Aligned_cols=134 Identities=16% Similarity=0.093 Sum_probs=81.9
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHH----HHHcC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEA----AKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||...... ......+....|+.+...++++ +.+.+ -.++|++||.....+.+.
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~------------ 146 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRA------------ 146 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcC------------
Confidence 78999999864311 1111224456777776655544 33332 258999999744221111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
. ..|+.+|...+.+.+.++.+ .|+.+..+.||.+..+... +.. + .. -.
T Consensus 147 ---~------~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~---------------~~~---~-~~-~~ 197 (246)
T PRK05599 147 ---N------YVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTT---------------GMK---P-AP-MS 197 (246)
T ss_pred ---C------cchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhc---------------CCC---C-CC-CC
Confidence 1 37999999999998888765 4788999999988543211 000 0 00 02
Q ss_pred eeHHhHHHHHHHhhcCCCCCceEEEec
Q 026820 149 VHVKDVAKAQVLLFETSAASGRYLCTN 175 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~~~~~~~~~ 175 (232)
...+|+|+.++.++........+..++
T Consensus 198 ~~pe~~a~~~~~~~~~~~~~~~~~~~~ 224 (246)
T PRK05599 198 VYPRDVAAAVVSAITSSKRSTTLWIPG 224 (246)
T ss_pred CCHHHHHHHHHHHHhcCCCCceEEeCc
Confidence 468999999999998764433443433
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00035 Score=54.70 Aligned_cols=147 Identities=14% Similarity=0.050 Sum_probs=87.3
Q ss_pred CeEEEeecCCCCC-----CCC---CchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLD-----DPK---DPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~-----~~~---~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||..... ... +.....+++|+.+...+++++... .-.++|++|+.+. .+
T Consensus 87 D~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~-~~-------------- 151 (256)
T PRK07889 87 DGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT-VA-------------- 151 (256)
T ss_pred cEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc-cc--------------
Confidence 7899999986320 111 222446889999998888876532 1136888775311 00
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
.+.+ ..|+.||...+.+.+.++.+ .|+.+..+.||.+-.+.... ..........+....+ ..+.
T Consensus 152 --~~~~-----~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p-----~~~~ 218 (256)
T PRK07889 152 --WPAY-----DWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKA-IPGFELLEEGWDERAP-----LGWD 218 (256)
T ss_pred --CCcc-----chhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhc-ccCcHHHHHHHHhcCc-----cccc
Confidence 0111 47999999999999888765 48999999999886532111 0001111111111111 1113
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
+...+|+|++++.++... ..+|. +.+++
T Consensus 219 ~~~p~evA~~v~~l~s~~~~~~tG~~i~vdg 249 (256)
T PRK07889 219 VKDPTPVARAVVALLSDWFPATTGEIVHVDG 249 (256)
T ss_pred cCCHHHHHHHHHHHhCcccccccceEEEEcC
Confidence 567999999999998653 23554 34444
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00041 Score=55.69 Aligned_cols=137 Identities=10% Similarity=-0.000 Sum_probs=85.5
Q ss_pred CeEEEeecCCC----C--CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNT----L--DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~----~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||... + ....++.+..+++|+.+...+++++... .-.++|++||.....+.+.
T Consensus 122 DiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~II~isS~a~~~~~p~------------- 188 (303)
T PLN02730 122 DILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGASISLTYIASERIIPG------------- 188 (303)
T ss_pred CEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechhhcCCCCC-------------
Confidence 79999997532 1 2222345677899999999998886543 1148999998744221111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
. ...|+.+|...+.+.+.++.+ .|+++..+-||.+--+-... ............... + ...+
T Consensus 189 --~-----~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~-~~~~~~~~~~~~~~~----p--l~r~ 254 (303)
T PLN02730 189 --Y-----GGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA-IGFIDDMIEYSYANA----P--LQKE 254 (303)
T ss_pred --C-----chhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc-ccccHHHHHHHHhcC----C--CCCC
Confidence 0 026999999999999988864 36899999999885432211 111111111111111 1 0134
Q ss_pred eeHHhHHHHHHHhhcC
Q 026820 149 VHVKDVAKAQVLLFET 164 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~ 164 (232)
...+|++.++++++..
T Consensus 255 ~~peevA~~~~fLaS~ 270 (303)
T PLN02730 255 LTADEVGNAAAFLASP 270 (303)
T ss_pred cCHHHHHHHHHHHhCc
Confidence 6789999999999864
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=97.93 E-value=4.3e-05 Score=59.20 Aligned_cols=147 Identities=18% Similarity=0.148 Sum_probs=91.9
Q ss_pred CeEEEeecCCCC----CC----CCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL----DD----PKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~----~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+++.... .. ..+.....++.|+.+...+++++... .-.++|++||.+..-..+
T Consensus 75 D~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~------------ 142 (241)
T PF13561_consen 75 DILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMP------------ 142 (241)
T ss_dssp SEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBST------------
T ss_pred EEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCc------------
Confidence 789999988653 11 11123567788888888888887543 114799999873311100
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHH---H-cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAE---K-NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~-~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
. ...|+.+|...|.+.+.++. . .|+++.++.||.+-.+.... ......+...+....| ..
T Consensus 143 ----~-----~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~-~~~~~~~~~~~~~~~p------l~ 206 (241)
T PF13561_consen 143 ----G-----YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTER-IPGNEEFLEELKKRIP------LG 206 (241)
T ss_dssp ----T-----THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHH-HHTHHHHHHHHHHHST------TS
T ss_pred ----c-----chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhc-cccccchhhhhhhhhc------cC
Confidence 1 14899999999999988875 3 58999999999886432100 0011222222222221 11
Q ss_pred CceeHHhHHHHHHHhhcCC--CCCceE-EEec
Q 026820 147 GAVHVKDVAKAQVLLFETS--AASGRY-LCTN 175 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~--~~~~~~-~~~~ 175 (232)
-+...+|+|+++..++... ..+|.. .++|
T Consensus 207 r~~~~~evA~~v~fL~s~~a~~itG~~i~vDG 238 (241)
T PF13561_consen 207 RLGTPEEVANAVLFLASDAASYITGQVIPVDG 238 (241)
T ss_dssp SHBEHHHHHHHHHHHHSGGGTTGTSEEEEEST
T ss_pred CCcCHHHHHHHHHHHhCccccCccCCeEEECC
Confidence 3568999999999999754 456754 4443
|
... |
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0001 Score=60.60 Aligned_cols=141 Identities=22% Similarity=0.147 Sum_probs=84.1
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHH
Q 026820 21 ELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAE 100 (232)
Q Consensus 21 ~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 100 (232)
.-+.+...|++|+++||+.+|++|++++||++. ... ....+... ....+..+|+.+|.++ +
T Consensus 172 ~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~---~~~-------~~~~~~~~-----~~~~~~~~k~~~e~~~----~ 232 (411)
T KOG1203|consen 172 TPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGG---TKF-------NQPPNILL-----LNGLVLKAKLKAEKFL----Q 232 (411)
T ss_pred CcceecHHHHHHHHHHHHHhCCceEEEEEeecC---ccc-------CCCchhhh-----hhhhhhHHHHhHHHHH----H
Confidence 445678899999999999999999999998733 111 10000000 0024557788888874 4
Q ss_pred HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHhHHHHHHHhhcCCCCCc-e--EEEe--
Q 026820 101 KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQVLLFETSAASG-R--YLCT-- 174 (232)
Q Consensus 101 ~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~--~~~~-- 174 (232)
+.|++++|+|++...-..... ... .....+.. .++..--.+.-.|+|+..+.++.+....+ . +++.
T Consensus 233 ~Sgl~ytiIR~g~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~v~~~ 304 (411)
T KOG1203|consen 233 DSGLPYTIIRPGGLEQDTGGQ--REV------VVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATFKKVVELVLKP 304 (411)
T ss_pred hcCCCcEEEeccccccCCCCc--cee------cccCccccccccccceeeehhhHHHHHHHHHhhhhhccceeEEeecCC
Confidence 679999999999775322110 000 00111111 11122136788999999999998887766 3 3442
Q ss_pred cCc-ccHHHHHHHHH
Q 026820 175 NGI-YQFAEFAEKVS 188 (232)
Q Consensus 175 ~~~-~s~~el~~~i~ 188 (232)
+.+ ..+.++.+.+.
T Consensus 305 ~gpg~~~~~l~~~~~ 319 (411)
T KOG1203|consen 305 EGPGRPYKVLLELFP 319 (411)
T ss_pred CCCCccHHHHHhhcc
Confidence 233 45666665554
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00024 Score=55.64 Aligned_cols=143 Identities=10% Similarity=-0.029 Sum_probs=81.0
Q ss_pred CeEEEeecCCCCC---CCCCc---hhhhHHHHHHHHHHHHHH----HH-HcCCCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTLD---DPKDP---EKELLIPAVQGTLNVLEA----AK-KFGVRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~~---~~~~~---~~~~~~~nv~~~~~l~~~----~~-~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|+|||+||..... ....+ ....+..|+.++..+.++ +. +.+..++|++||.+...+.+
T Consensus 78 d~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~----------- 146 (259)
T PRK08340 78 DALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMP----------- 146 (259)
T ss_pred CEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCC-----------
Confidence 7999999975320 11111 223456676665544433 32 23345899999974311100
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCC--------hhHH-HHHHHHhCC
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVN--------ASGA-VLQRLLQGS 137 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~--------~~~~-~~~~~~~~~ 137 (232)
.. ..|+.+|...+.+.+.++.+. |+.+..+.||.+-.+....... .... +...+...
T Consensus 147 ----~~------~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 215 (259)
T PRK08340 147 ----PL------VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLER- 215 (259)
T ss_pred ----Cc------hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhcc-
Confidence 11 479999999999999988754 7889999999875442110000 0000 01111111
Q ss_pred CCccCCcccCceeHHhHHHHHHHhhcCC--CCCce
Q 026820 138 KDTQEHYWLGAVHVKDVAKAQVLLFETS--AASGR 170 (232)
Q Consensus 138 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~ 170 (232)
.+ ..-+...+|+++++..++... ..+|.
T Consensus 216 ---~p--~~r~~~p~dva~~~~fL~s~~~~~itG~ 245 (259)
T PRK08340 216 ---TP--LKRTGRWEELGSLIAFLLSENAEYMLGS 245 (259)
T ss_pred ---CC--ccCCCCHHHHHHHHHHHcCcccccccCc
Confidence 11 113567899999999998643 34454
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=9.7e-05 Score=58.42 Aligned_cols=148 Identities=13% Similarity=0.045 Sum_probs=90.9
Q ss_pred CeEEEeecCCCC--------CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL--------DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||.... ....+.....+++|+.++..+++++... +-.++|++||.+...+.
T Consensus 90 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~------------- 156 (272)
T PRK08159 90 DFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVM------------- 156 (272)
T ss_pred cEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCC-------------
Confidence 789999997542 1112234677899999999999887643 22489999986331110
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
|. ...|+.+|...+.+.+.++.+ .++++.++.||.+-.+.... .... .......... ... .-
T Consensus 157 ---p~-----~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~~-~~~~~~~~~~-~p~----~r 221 (272)
T PRK08159 157 ---PH-----YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASG-IGDF-RYILKWNEYN-APL----RR 221 (272)
T ss_pred ---Cc-----chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhc-CCcc-hHHHHHHHhC-Ccc----cc
Confidence 11 147999999999999888765 37999999999885431110 0000 0111111111 001 12
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCceE-EEecC
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGRY-LCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~~-~~~~~ 176 (232)
+...+|+++++++++... ..+|.. .+++.
T Consensus 222 ~~~peevA~~~~~L~s~~~~~itG~~i~vdgG 253 (272)
T PRK08159 222 TVTIEEVGDSALYLLSDLSRGVTGEVHHVDSG 253 (272)
T ss_pred cCCHHHHHHHHHHHhCccccCccceEEEECCC
Confidence 567899999999998643 345543 45543
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=7.3e-05 Score=57.27 Aligned_cols=99 Identities=14% Similarity=0.069 Sum_probs=66.2
Q ss_pred CeEEEeecCCCCC------CCCCchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD------DPKDPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||..... ....+....+..|+.++..+++++... +..+++++||.. +....+ +
T Consensus 73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~---g~~~~~---------~ 140 (225)
T PRK08177 73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL---GSVELP---------D 140 (225)
T ss_pred CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc---cccccC---------C
Confidence 7899999886431 111233456778999999988887543 324788888752 211100 0
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGP 117 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~ 117 (232)
.... ..|+.+|...|.+++.++.+ .++.+..++||.+-.+
T Consensus 141 ~~~~------~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 141 GGEM------PLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred CCCc------cchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 0111 36999999999999988765 3688999999988543
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.87 E-value=4.1e-05 Score=55.20 Aligned_cols=90 Identities=21% Similarity=0.226 Sum_probs=66.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+.+-+-|.+.. ....+..++++-+....+.++|++.|+++|+.+||.++ . +.. .
T Consensus 85 dV~FcaLgTTRg---kaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GA-d--~sS--------------r----- 139 (238)
T KOG4039|consen 85 DVLFCALGTTRG---KAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGA-D--PSS--------------R----- 139 (238)
T ss_pred ceEEEeeccccc---ccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCC-C--ccc--------------c-----
Confidence 344555555543 44456778888888999999999999999999999744 1 110 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCC-cEEEEcCCCeeCCCCC
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGT-DVVAIHPATSLGPFPQ 120 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~-~~~ilR~~~i~G~~~~ 120 (232)
-.|-..|-+.|+.+.++ ++ .++|+|||.+.|....
T Consensus 140 -FlY~k~KGEvE~~v~eL----~F~~~~i~RPG~ll~~R~e 175 (238)
T KOG4039|consen 140 -FLYMKMKGEVERDVIEL----DFKHIIILRPGPLLGERTE 175 (238)
T ss_pred -eeeeeccchhhhhhhhc----cccEEEEecCcceeccccc
Confidence 26888899999887765 45 4899999999996543
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00046 Score=53.13 Aligned_cols=141 Identities=13% Similarity=0.039 Sum_probs=87.2
Q ss_pred CeEEEeecCCCCCC-------CC---CchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCcc
Q 026820 1 MGVFHLASPNTLDD-------PK---DPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVI 66 (232)
Q Consensus 1 D~Vih~a~~~~~~~-------~~---~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~ 66 (232)
|+|||+||...... .. ......+.+|+.+...+++++.. .+..+++++||... ..
T Consensus 69 d~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~---~~-------- 137 (235)
T PRK09009 69 DWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG---SI-------- 137 (235)
T ss_pred CEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc---cc--------
Confidence 78999999864210 01 11235678888888888877654 23457888887421 11
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCcc
Q 026820 67 DETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK-----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQ 141 (232)
Q Consensus 67 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (232)
.+.. ..+. ..|+.+|...+.+.+.++.+ .++.+..+.||.+-.+.... +....
T Consensus 138 ~~~~-~~~~------~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~-----------~~~~~---- 195 (235)
T PRK09009 138 SDNR-LGGW------YSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP-----------FQQNV---- 195 (235)
T ss_pred ccCC-CCCc------chhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc-----------hhhcc----
Confidence 0000 0111 37999999999999988754 37788899999886543211 00111
Q ss_pred CCcccCceeHHhHHHHHHHhhcCCC--CCceE-EEecC
Q 026820 142 EHYWLGAVHVKDVAKAQVLLFETSA--ASGRY-LCTNG 176 (232)
Q Consensus 142 ~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~-~~~~~ 176 (232)
+ ...+...+|+++++..++.... ..|.+ .+.++
T Consensus 196 ~--~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~ 231 (235)
T PRK09009 196 P--KGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDGE 231 (235)
T ss_pred c--cCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCc
Confidence 1 1235789999999999987643 34544 34443
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00038 Score=54.19 Aligned_cols=118 Identities=14% Similarity=0.052 Sum_probs=71.0
Q ss_pred CeEEEeecCCCC-CCCCCchhhhHHHHHHHHHHHHHHHHHc-------CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL-DDPKDPEKELLIPAVQGTLNVLEAAKKF-------GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~-------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||.... ....++..+.+++|+.++.++++++... +-..++..||.+.. ...
T Consensus 81 DilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~-~~~-------------- 145 (245)
T PRK12367 81 DVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEI-QPA-------------- 145 (245)
T ss_pred CEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEeccccc-CCC--------------
Confidence 799999997543 2223345778899999999999886542 11234444443221 000
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHH-------HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAE-------KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (232)
.. ..|+.||...+.+. .+.+ ..++.+..+.|+.+-.+ .. .
T Consensus 146 -~~------~~Y~aSKaal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~-----~~--------------------~ 192 (245)
T PRK12367 146 -LS------PSYEISKRLIGQLV-SLKKNLLDKNERKKLIIRKLILGPFRSE-----LN--------------------P 192 (245)
T ss_pred -CC------chhHHHHHHHHHHH-HHHHHHHHhhcccccEEEEecCCCcccc-----cC--------------------c
Confidence 01 37999999976543 2222 24677777776654211 00 0
Q ss_pred cCceeHHhHHHHHHHhhcCCC
Q 026820 146 LGAVHVKDVAKAQVLLFETSA 166 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~~ 166 (232)
...+..+|+|+.++.++.+..
T Consensus 193 ~~~~~~~~vA~~i~~~~~~~~ 213 (245)
T PRK12367 193 IGIMSADFVAKQILDQANLGL 213 (245)
T ss_pred cCCCCHHHHHHHHHHHHhcCC
Confidence 124678999999999886543
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00012 Score=53.18 Aligned_cols=80 Identities=18% Similarity=0.102 Sum_probs=59.9
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~ 76 (232)
|+|||+||........ +...+.+..|+.+...+.+++...+-.++|++||+....+.+.
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~----------------- 144 (167)
T PF00106_consen 82 DILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPG----------------- 144 (167)
T ss_dssp SEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTT-----------------
T ss_pred cccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCC-----------------
Confidence 7899999997741111 2225788999999999999987754568999999855433222
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHH
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEK 101 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~ 101 (232)
...|+.+|...+.+.+.++++
T Consensus 145 ----~~~Y~askaal~~~~~~la~e 165 (167)
T PF00106_consen 145 ----MSAYSASKAALRGLTQSLAAE 165 (167)
T ss_dssp ----BHHHHHHHHHHHHHHHHHHHH
T ss_pred ----ChhHHHHHHHHHHHHHHHHHh
Confidence 148999999999999988765
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00026 Score=70.79 Aligned_cols=95 Identities=23% Similarity=0.230 Sum_probs=73.3
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~ 76 (232)
|+|||+||.... ....+.....+++|+.|+.++++++.....+++|++||..+.+|....
T Consensus 2123 DgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~gq---------------- 2186 (2582)
T TIGR02813 2123 TGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNAENIKLLALFSSAAGFYGNTGQ---------------- 2186 (2582)
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCCCCCc----------------
Confidence 789999998643 112223467889999999999999987766789999998776665432
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHc-CCcEEEEcCCCeeC
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEKN-GTDVVAIHPATSLG 116 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G 116 (232)
..|+.+|...+.+...+..+. ++++..+.+|.+-|
T Consensus 2187 -----s~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdt 2222 (2582)
T TIGR02813 2187 -----SDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDG 2222 (2582)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecC
Confidence 479999999998888777654 67888888887754
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00098 Score=52.66 Aligned_cols=93 Identities=23% Similarity=0.216 Sum_probs=64.4
Q ss_pred eEEEeecCCCC--CC---CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 2 GVFHLASPNTL--DD---PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 2 ~Vih~a~~~~~--~~---~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
+|||+||.... .. ..+++....++|+.|+..+.++. +++. .|+|++||+.. ....
T Consensus 109 glVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~G---R~~~------------ 172 (322)
T KOG1610|consen 109 GLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLG---RVAL------------ 172 (322)
T ss_pred eEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEeccccc---CccC------------
Confidence 58999996543 11 11245677899988888777764 3442 38999999743 2111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGP 117 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~ 117 (232)
+...+|..||+..|.+.+...++ .|+++.++-|| +|-.
T Consensus 173 ------p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG-~f~T 213 (322)
T KOG1610|consen 173 ------PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG-FFKT 213 (322)
T ss_pred ------cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC-cccc
Confidence 01148999999999998877654 59999999999 4433
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00046 Score=52.85 Aligned_cols=129 Identities=12% Similarity=0.104 Sum_probs=84.3
Q ss_pred CeEEEeecCCCC---------CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTL---------DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~---------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|++||+||.... ....+.....+++|+.++..+++++... .-.++|++||.. ...
T Consensus 71 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~~---------- 136 (223)
T PRK05884 71 DTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PPA---------- 136 (223)
T ss_pred cEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CCC----------
Confidence 789999985211 0012335677899999999999987642 224899999852 000
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
. ..|+.+|...+.+.+.++.+ .|+++..+.||.+-.+.. ... ...
T Consensus 137 -----~------~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~-----------~~~-~~~--------- 184 (223)
T PRK05884 137 -----G------SAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY-----------DGL-SRT--------- 184 (223)
T ss_pred -----c------cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh-----------hhc-cCC---------
Confidence 0 37999999999999888764 479999999998853210 000 000
Q ss_pred CceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 147 GAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
+.-..+|+++++..++... ..+|. ..+.|
T Consensus 185 p~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdg 216 (223)
T PRK05884 185 PPPVAAEIARLALFLTTPAARHITGQTLHVSH 216 (223)
T ss_pred CCCCHHHHHHHHHHHcCchhhccCCcEEEeCC
Confidence 1126899999999988643 33453 34443
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00022 Score=52.86 Aligned_cols=91 Identities=25% Similarity=0.273 Sum_probs=62.0
Q ss_pred CeEEEeecCCCC-CCCCCch---hhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTL-DDPKDPE---KELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~-~~~~~~~---~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~ 76 (232)
|.|||+|+.... .....++ ...+..-+.++.+|.++.....++.||.+||++.+.|....
T Consensus 83 ~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq---------------- 146 (181)
T PF08659_consen 83 DGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQ---------------- 146 (181)
T ss_dssp EEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTB----------------
T ss_pred ceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcch----------------
Confidence 479999999654 1222233 45566778999999999988888999999999888877652
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCC
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPAT 113 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~ 113 (232)
..|+.+-...+.+.... ++.+.+++++..+.
T Consensus 147 -----~~YaaAN~~lda~a~~~-~~~g~~~~sI~wg~ 177 (181)
T PF08659_consen 147 -----SAYAAANAFLDALARQR-RSRGLPAVSINWGA 177 (181)
T ss_dssp -----HHHHHHHHHHHHHHHHH-HHTTSEEEEEEE-E
T ss_pred -----HhHHHHHHHHHHHHHHH-HhCCCCEEEEEccc
Confidence 58999999999888774 45688888887543
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00027 Score=55.51 Aligned_cols=93 Identities=20% Similarity=0.121 Sum_probs=63.1
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||.||...... ...+....+++|+.|+-.+.+++. +.+-.|+|.+||++...+-+.
T Consensus 93 DvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~------------- 159 (282)
T KOG1205|consen 93 DVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF------------- 159 (282)
T ss_pred CEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc-------------
Confidence 89999999976411 112235688999998888887754 444358999999844222111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEE----EcCCCe
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVA----IHPATS 114 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~i----lR~~~i 114 (232)
.+.|..||.+.+.+.+.+.++.....++ +-||.|
T Consensus 160 --------~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V 197 (282)
T KOG1205|consen 160 --------RSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPI 197 (282)
T ss_pred --------ccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCce
Confidence 1379999999999999988776433332 455555
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00048 Score=50.65 Aligned_cols=129 Identities=19% Similarity=0.149 Sum_probs=80.9
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHHHc----CC--CEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAKKF----GV--RRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~--~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
++++||||.+.. .-.+++++....+|+.|+..+.+++.+. +- -++|.+||+-..-|+...
T Consensus 92 svlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQ---------- 161 (256)
T KOG1200|consen 92 SVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQ---------- 161 (256)
T ss_pred cEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccc----------
Confidence 579999999754 3334456788899999999888887543 21 279999997433333221
Q ss_pred CCCcccccccchhHHHHH--------HHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccC
Q 026820 71 WTDLDFCKSHKIWYSMSK--------TLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQE 142 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK--------~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (232)
..|+.+| ..+.++ + +.++++.++-||.|--|-... .-..++.++...-|..
T Consensus 162 -----------tnYAAsK~GvIgftktaArEl----a-~knIrvN~VlPGFI~tpMT~~---mp~~v~~ki~~~iPmg-- 220 (256)
T KOG1200|consen 162 -----------TNYAASKGGVIGFTKTAAREL----A-RKNIRVNVVLPGFIATPMTEA---MPPKVLDKILGMIPMG-- 220 (256)
T ss_pred -----------hhhhhhcCceeeeeHHHHHHH----h-hcCceEeEeccccccChhhhh---cCHHHHHHHHccCCcc--
Confidence 2455554 444333 2 348999999999886543221 2233444444333221
Q ss_pred CcccCceeHHhHHHHHHHhhcC
Q 026820 143 HYWLGAVHVKDVAKAQVLLFET 164 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~ 164 (232)
-+-..+|+|..+++++..
T Consensus 221 ----r~G~~EevA~~V~fLAS~ 238 (256)
T KOG1200|consen 221 ----RLGEAEEVANLVLFLASD 238 (256)
T ss_pred ----ccCCHHHHHHHHHHHhcc
Confidence 244589999999998843
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00059 Score=54.72 Aligned_cols=148 Identities=11% Similarity=0.055 Sum_probs=88.9
Q ss_pred CeEEEeecCCC--C----CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNT--L----DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~--~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||... . ....++.+..+++|+.+..++++++... .-.++|++||.....+.+..
T Consensus 121 DvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~~p~~------------ 188 (299)
T PRK06300 121 DILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRAVPGY------------ 188 (299)
T ss_pred cEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCcCCCc------------
Confidence 78999997642 1 1122334677799999999999887643 12378888886442221110
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
. ..|+.+|...+.+.+.++.+ .|+.+..+.||.+--+.... ..........+....+ . ...
T Consensus 189 --~------~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~-~~~~~~~~~~~~~~~p--~----~r~ 253 (299)
T PRK06300 189 --G------GGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKA-IGFIERMVDYYQDWAP--L----PEP 253 (299)
T ss_pred --c------HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhc-ccccHHHHHHHHhcCC--C----CCC
Confidence 0 26999999999999888764 27899999999885432110 0001111111111111 1 134
Q ss_pred eeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 149 VHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
...+|+++++.+++... ..+|. +.+.+
T Consensus 254 ~~peevA~~v~~L~s~~~~~itG~~i~vdG 283 (299)
T PRK06300 254 MEAEQVGAAAAFLVSPLASAITGETLYVDH 283 (299)
T ss_pred cCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 57899999999988542 34453 34443
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0035 Score=52.35 Aligned_cols=118 Identities=15% Similarity=0.038 Sum_probs=68.9
Q ss_pred CeEEEeecCCCC-CCCCCchhhhHHHHHHHHHHHHHHHHH----cCC---C-EEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-DDPKDPEKELLIPAVQGTLNVLEAAKK----FGV---R-RVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~---~-~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||.... ....+..++.+++|+.++.++++++.. .+. + .+|.+|+ +.. ...
T Consensus 247 DiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~-~~~------------- 311 (406)
T PRK07424 247 DILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV-NPA------------- 311 (406)
T ss_pred CEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc-cCC-------------
Confidence 789999997543 222223467889999999999998753 221 2 2444443 121 000
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
.. ..|+.||...+.+........+..+..+.| |+.... .. ....+..
T Consensus 312 --~~------~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~----gp~~t~-~~--------------------~~~~~sp 358 (406)
T PRK07424 312 --FS------PLYELSKRALGDLVTLRRLDAPCVVRKLIL----GPFKSN-LN--------------------PIGVMSA 358 (406)
T ss_pred --Cc------hHHHHHHHHHHHHHHHHHhCCCCceEEEEe----CCCcCC-CC--------------------cCCCCCH
Confidence 01 369999999988754322223444444333 332211 00 1124678
Q ss_pred HhHHHHHHHhhcCCC
Q 026820 152 KDVAKAQVLLFETSA 166 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~ 166 (232)
+|+|+.++..++++.
T Consensus 359 e~vA~~il~~i~~~~ 373 (406)
T PRK07424 359 DWVAKQILKLAKRDF 373 (406)
T ss_pred HHHHHHHHHHHHCCC
Confidence 999999999986653
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0038 Score=47.12 Aligned_cols=135 Identities=17% Similarity=0.112 Sum_probs=87.0
Q ss_pred CeEEEeecCCCC-------CCCCCchhhhHHHHHHHHHHHHHHHHHc--C---CCEEEEecccceeccCCCCCCCCccCC
Q 026820 1 MGVFHLASPNTL-------DDPKDPEKELLIPAVQGTLNVLEAAKKF--G---VRRVVLTSSISSIVPNPNWPQGKVIDE 68 (232)
Q Consensus 1 D~Vih~a~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~---~~~~i~~Ss~~~~~~~~~~~~~~~~~E 68 (232)
|+|||.||.... .......+.+++.|+-+...|...+... + .+.++++||.+++-.=..+
T Consensus 84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~w-------- 155 (253)
T KOG1204|consen 84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSW-------- 155 (253)
T ss_pred eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHH--------
Confidence 689999998655 1112234678899988888887776543 2 2679999997553221111
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCC---CCC---CChhHHHHHHHHhCCCCc
Q 026820 69 TSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFP---QPY---VNASGAVLQRLLQGSKDT 140 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~---~~~---~~~~~~~~~~~~~~~~~~ 140 (232)
..|..+|++-+.+.+.++.+. ++.+..++||.+=-+-+ ... ......+++.+...+
T Consensus 156 -------------a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~--- 219 (253)
T KOG1204|consen 156 -------------AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESG--- 219 (253)
T ss_pred -------------HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcC---
Confidence 479999999999999887654 77888888887732110 000 112223334433333
Q ss_pred cCCcccCceeHHhHHHHHHHhhcCC
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~~ 165 (232)
..++..+-++.+..++++.
T Consensus 220 ------~ll~~~~~a~~l~~L~e~~ 238 (253)
T KOG1204|consen 220 ------QLLDPQVTAKVLAKLLEKG 238 (253)
T ss_pred ------CcCChhhHHHHHHHHHHhc
Confidence 4667777888888888766
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.003 Score=50.89 Aligned_cols=142 Identities=15% Similarity=0.076 Sum_probs=79.4
Q ss_pred CeEEEee-cCCC------C--CCCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccC
Q 026820 1 MGVFHLA-SPNT------L--DDPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVID 67 (232)
Q Consensus 1 D~Vih~a-~~~~------~--~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~ 67 (232)
|++||+| |... . ........+.++.|+.+...+++++.. .+-.++|++||....+....
T Consensus 97 DilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~-------- 168 (305)
T PRK08303 97 DILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATH-------- 168 (305)
T ss_pred cEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcC--------
Confidence 7899999 6421 1 011122345678888888887776543 22248999998633221110
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCc
Q 026820 68 ETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHY 144 (232)
Q Consensus 68 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (232)
.+. ...|+.+|...+.+.+.++.+. |+.+..+.||.+-.+-.................. .+.
T Consensus 169 -----~~~-----~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----~p~- 233 (305)
T PRK08303 169 -----YRL-----SVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAK----EPH- 233 (305)
T ss_pred -----CCC-----cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhcc----ccc-
Confidence 000 1379999999999988877653 7899999998874321000000000000000000 010
Q ss_pred ccCceeHHhHHHHHHHhhcCC
Q 026820 145 WLGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 145 ~~~~i~v~D~a~~~~~~~~~~ 165 (232)
..-+...+|++.+++.++...
T Consensus 234 ~~~~~~peevA~~v~fL~s~~ 254 (305)
T PRK08303 234 FAISETPRYVGRAVAALAADP 254 (305)
T ss_pred cccCCCHHHHHHHHHHHHcCc
Confidence 112346899999999998654
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.022 Score=41.78 Aligned_cols=122 Identities=15% Similarity=0.026 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcE
Q 026820 27 VQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDV 106 (232)
Q Consensus 27 v~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 106 (232)
....+.|++..+..++.|++.++..+..|-.+. . --.+.|..|. -.|..++..+|.+ ..+..+.+++|
T Consensus 82 ~k~~~~li~~l~~agv~RllVVGGAGSL~id~g---~--rLvD~p~fP~------ey~~~A~~~ae~L-~~Lr~~~~l~W 149 (211)
T COG2910 82 SKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG---T--RLVDTPDFPA------EYKPEALAQAEFL-DSLRAEKSLDW 149 (211)
T ss_pred HHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC---c--eeecCCCCch------hHHHHHHHHHHHH-HHHhhccCcce
Confidence 334778888898889999999998776665443 1 2233344443 2577788888744 33444557999
Q ss_pred EEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHhHHHHHHHhhcCCCCCc
Q 026820 107 VAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQVLLFETSAASG 169 (232)
Q Consensus 107 ~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 169 (232)
|-+-|+..|-|+.+.+- +..|+... .....-++|..+|.|-+++..++++....
T Consensus 150 TfvSPaa~f~PGerTg~---------yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~r 204 (211)
T COG2910 150 TFVSPAAFFEPGERTGN---------YRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHIR 204 (211)
T ss_pred EEeCcHHhcCCccccCc---------eEeccceEEEcCCCceeeeHHHHHHHHHHHHhcccccc
Confidence 99999999988765431 11122211 22234489999999999999999887655
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0025 Score=50.37 Aligned_cols=136 Identities=21% Similarity=0.171 Sum_probs=84.8
Q ss_pred CeEEEeecCCCCC-CCCC---chhhhHHHHHHHHHHHHHHHHHc-----CCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD-DPKD---PEKELLIPAVQGTLNVLEAAKKF-----GVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~-~~~~---~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|.+|||||..-+. .... .-+..+++|..++.|+++++..+ +..+++.+||..+.++=.+.
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~Gy----------- 182 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGY----------- 182 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccc-----------
Confidence 6789999986541 1111 22567799999999999886533 12389999988665554332
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAE---KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
+.|+-+|...--+.....+ ..++.++..-|+.+--|+..... ......-++..| .-+.
T Consensus 183 ----------saYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En-~tkP~~t~ii~g--------~ss~ 243 (331)
T KOG1210|consen 183 ----------SAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFEREN-KTKPEETKIIEG--------GSSV 243 (331)
T ss_pred ----------cccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccc-ccCchheeeecC--------CCCC
Confidence 3577777666555444443 34888998888888776533211 111111112222 2355
Q ss_pred eeHHhHHHHHHHhhcCCC
Q 026820 149 VHVKDVAKAQVLLFETSA 166 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~ 166 (232)
+..+++|.+++.-+.+.+
T Consensus 244 ~~~e~~a~~~~~~~~rg~ 261 (331)
T KOG1210|consen 244 IKCEEMAKAIVKGMKRGN 261 (331)
T ss_pred cCHHHHHHHHHhHHhhcC
Confidence 889999999998775543
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0022 Score=50.39 Aligned_cols=129 Identities=15% Similarity=0.017 Sum_probs=84.8
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHH----HHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEA----AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||.||.... ...++.-+..+++|+.+.....++ +.+.+-.++|.++|+++..+.+..
T Consensus 116 ~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl------------ 183 (300)
T KOG1201|consen 116 DILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGL------------ 183 (300)
T ss_pred eEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccc------------
Confidence 689999999876 222223356778998887776666 445444599999998665554442
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH------cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK------NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
..|..||..+.-+.+++..+ .|++.+.+-|+.+=-. + ..+ ...++ ...
T Consensus 184 ---------~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg-----------m----f~~-~~~~~-~l~ 237 (300)
T KOG1201|consen 184 ---------ADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG-----------M----FDG-ATPFP-TLA 237 (300)
T ss_pred ---------hhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc-----------c----cCC-CCCCc-ccc
Confidence 37999999987776665422 2677888777766210 0 111 11111 244
Q ss_pred CceeHHhHHHHHHHhhcCCCC
Q 026820 147 GAVHVKDVAKAQVLLFETSAA 167 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~~~ 167 (232)
+.+..+.+|+-++..+...+.
T Consensus 238 P~L~p~~va~~Iv~ai~~n~~ 258 (300)
T KOG1201|consen 238 PLLEPEYVAKRIVEAILTNQA 258 (300)
T ss_pred CCCCHHHHHHHHHHHHHcCCc
Confidence 788899999999998866543
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0037 Score=48.55 Aligned_cols=93 Identities=18% Similarity=0.133 Sum_probs=65.5
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHHc-CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+++|+||.... ....+..+..+++|+.+...+.+++... .-+++|++||.... .... .
T Consensus 88 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~------~-------- 152 (251)
T COG1028 88 DILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPP------G-------- 152 (251)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCC------C--------
Confidence 789999998642 2222345678899999988888844432 11289999997442 2111 0
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCe
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATS 114 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i 114 (232)
. ..|+.||...+.+.+.+..+ .|+.+..+-||.+
T Consensus 153 ~------~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~ 189 (251)
T COG1028 153 Q------AAYAASKAALIGLTKALALELAPRGIRVNAVAPGYI 189 (251)
T ss_pred c------chHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccC
Confidence 1 48999999999998888744 4899999999944
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.014 Score=47.09 Aligned_cols=150 Identities=17% Similarity=0.041 Sum_probs=89.1
Q ss_pred CeEEEeecCCCCCC--CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDD--PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~--~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+.||.||...... ..+..+..+.+|..|...|.+.+ ++....|+|++||... +... ..+..-.|....-.
T Consensus 116 dvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~--~~~~-~~~~l~~~~~~~~~ 192 (314)
T KOG1208|consen 116 DVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG--GGKI-DLKDLSGEKAKLYS 192 (314)
T ss_pred cEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc--cCcc-chhhccchhccCcc
Confidence 78999999987622 33446788899988877777664 4443359999999632 1110 00111122211001
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVK 152 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 152 (232)
....|+.||.....+..+++++. |+.+..+.||.+....... .......+...+.... +-..+
T Consensus 193 -----~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~~l~~~~---------~ks~~ 257 (314)
T KOG1208|consen 193 -----SDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR-VNLLLRLLAKKLSWPL---------TKSPE 257 (314)
T ss_pred -----chhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec-chHHHHHHHHHHHHHh---------ccCHH
Confidence 11259999999999998888765 6999999999998764332 2223222222221110 11356
Q ss_pred hHHHHHHHhhcCCCCC
Q 026820 153 DVAKAQVLLFETSAAS 168 (232)
Q Consensus 153 D~a~~~~~~~~~~~~~ 168 (232)
.-|.....++.++...
T Consensus 258 ~ga~t~~~~a~~p~~~ 273 (314)
T KOG1208|consen 258 QGAATTCYAALSPELE 273 (314)
T ss_pred HHhhheehhccCcccc
Confidence 6667777766666443
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.007 Score=46.50 Aligned_cols=93 Identities=13% Similarity=0.004 Sum_probs=60.6
Q ss_pred CeEEEeecCCCC--CCCCCch---hhhHHHHHHHHHHHHHHH----HHcC-CCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL--DDPKDPE---KELLIPAVQGTLNVLEAA----KKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~--~~~~~~~---~~~~~~nv~~~~~l~~~~----~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||.... .....+. .+.+..|+.+...+++.+ .+.+ -..+|++||... + ..
T Consensus 85 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~-~--~~----------- 150 (227)
T PRK08862 85 DVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD-H--QD----------- 150 (227)
T ss_pred CEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC-C--CC-----------
Confidence 789999985432 1111222 334566777766665543 3332 248999998521 1 10
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGP 117 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~ 117 (232)
. ..|+.+|...+.+.+.++.+ .++++..+.||.+-.+
T Consensus 151 ----~------~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 151 ----L------TGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred ----c------chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 1 37999999999998887764 4899999999988554
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0023 Score=51.74 Aligned_cols=109 Identities=12% Similarity=0.043 Sum_probs=73.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+||++||.... ...+..+.+..|+..++++++++++.+++++|+++|-.+ ....... ...+.+.+...+.
T Consensus 78 DvVVitaG~~~~--~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPv-dv~~~~~-~~~~~~~sg~p~~----- 148 (321)
T PTZ00325 78 DLVLICAGVPRK--PGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPV-NSTVPIA-AETLKKAGVYDPR----- 148 (321)
T ss_pred CEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH-HHHHHHH-HhhhhhccCCChh-----
Confidence 899999998543 234568899999999999999999999999999998532 2211100 0001233333333
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCC
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQ 120 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~ 120 (232)
..|+.+-...-|+-...++..+++..-++ +.|+|....
T Consensus 149 -~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd 186 (321)
T PTZ00325 149 -KLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG 186 (321)
T ss_pred -heeechhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence 36777656666666666677788888887 778886544
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.009 Score=47.18 Aligned_cols=141 Identities=16% Similarity=0.163 Sum_probs=85.8
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHH-HHHHHHHHHHc----CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQG-TLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~-~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+++|.||.... ....+..+..+++|+.| +..+.+++... +-..++++||.+........
T Consensus 91 diLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~---------- 160 (270)
T KOG0725|consen 91 DILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGS---------- 160 (270)
T ss_pred CEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCC----------
Confidence 789999998764 22233446778899994 66666665432 33478888876332211110
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCC-hhHHHHHHH-HhCCCCccCCcc
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVN-ASGAVLQRL-LQGSKDTQEHYW 145 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~ 145 (232)
+ ..|+.+|...+++.+..+.+ .|+++.++-||.|..+....... .......+. ........+
T Consensus 161 ---~-------~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~g--- 227 (270)
T KOG0725|consen 161 ---G-------VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLG--- 227 (270)
T ss_pred ---c-------ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccC---
Confidence 0 27999999999999998864 48999999999998765111100 000111111 001111111
Q ss_pred cCceeHHhHHHHHHHhhcCC
Q 026820 146 LGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~ 165 (232)
.+.-.+|++..+..++...
T Consensus 228 -r~g~~~eva~~~~fla~~~ 246 (270)
T KOG0725|consen 228 -RVGTPEEVAEAAAFLASDD 246 (270)
T ss_pred -CccCHHHHHHhHHhhcCcc
Confidence 3567899999999888653
|
|
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0052 Score=50.06 Aligned_cols=78 Identities=15% Similarity=0.143 Sum_probs=53.8
Q ss_pred hhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHH
Q 026820 21 ELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAW 96 (232)
Q Consensus 21 ~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 96 (232)
....++.+.+..|+++.. +.+.|++|.++|.... . +. . -.+|.++|...|+-+.
T Consensus 224 ~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~~----~------~s------~------~f~Yfk~K~~LE~dl~ 281 (410)
T PF08732_consen 224 ARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNNN----A------IS------S------MFPYFKTKGELENDLQ 281 (410)
T ss_pred chhhccccccHHHHHHhhhhhccCCCceEEEEEecCcc----h------hh------h------hhhhhHHHHHHHHHHH
Confidence 344555666667777766 5678899999986331 1 00 0 1489999999999988
Q ss_pred HHHHHcCCcEEEEcCCCeeCCCCC
Q 026820 97 EFAEKNGTDVVAIHPATSLGPFPQ 120 (232)
Q Consensus 97 ~~~~~~~~~~~ilR~~~i~G~~~~ 120 (232)
......=-..+|||||-+.|....
T Consensus 282 ~~l~~~l~~lvILRPGplvG~h~~ 305 (410)
T PF08732_consen 282 NLLPPKLKHLVILRPGPLVGEHGS 305 (410)
T ss_pred hhcccccceEEEecCccccCCCCC
Confidence 754321236899999999997654
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.00077 Score=48.66 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=79.8
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHH----HcCC-CEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAK----KFGV-RRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|..+|.||.... ...++..+..+++|+.+..++.+... ..++ ..++.+||.+. ..+++..
T Consensus 79 dgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas---------~R~~~nH-- 147 (245)
T KOG1207|consen 79 DGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQAS---------IRPLDNH-- 147 (245)
T ss_pred hhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhc---------ccccCCc--
Confidence 345666666432 22233446678899988888877733 3333 25899998743 1112222
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCee---CCCCCCCCChhHHHHHHHHhCCCCccCCcc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSL---GPFPQPYVNASGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (232)
+.|..+|...+.+.+.++-+. .+++..+.|..+. |...+.+-.....++.++.-+
T Consensus 148 ----------tvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~--------- 208 (245)
T KOG1207|consen 148 ----------TVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLK--------- 208 (245)
T ss_pred ----------eEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchh---------
Confidence 489999999999988777554 4556666666664 433333211112222222111
Q ss_pred cCceeHHhHHHHHHHhhcCC
Q 026820 146 LGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~ 165 (232)
-|.-++++++++..++...
T Consensus 209 -rFaEV~eVVnA~lfLLSd~ 227 (245)
T KOG1207|consen 209 -RFAEVDEVVNAVLFLLSDN 227 (245)
T ss_pred -hhhHHHHHHhhheeeeecC
Confidence 3777999999999988653
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.017 Score=46.81 Aligned_cols=107 Identities=17% Similarity=0.082 Sum_probs=73.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.... ...+..+....|...++++++.+.+.+.+.+|+++|= =+.+...-. ...+.+.+...+.
T Consensus 88 DiVVitAG~~~~--~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSN-PvD~~~~i~-t~~~~~~s~~p~~----- 158 (323)
T PLN00106 88 DLVIIPAGVPRK--PGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISN-PVNSTVPIA-AEVLKKAGVYDPK----- 158 (323)
T ss_pred CEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC-CccccHHHH-HHHHHHcCCCCcc-----
Confidence 899999998653 2345788999999999999999999998888887762 111000000 0011222323333
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCC
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 118 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~ 118 (232)
..|+.++...+++-..+++..+++..-++ +.|+|..
T Consensus 159 -~viG~~~LDs~Rl~~~lA~~lgv~~~~V~-~~ViGeH 194 (323)
T PLN00106 159 -KLFGVTTLDVVRANTFVAEKKGLDPADVD-VPVVGGH 194 (323)
T ss_pred -eEEEEecchHHHHHHHHHHHhCCChhheE-EEEEEeC
Confidence 47888888999998888888899888775 5566654
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.043 Score=41.65 Aligned_cols=139 Identities=15% Similarity=0.053 Sum_probs=84.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHH----HHHHHHHHHHHc-C--CCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQ----GTLNVLEAAKKF-G--VRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~----~~~~l~~~~~~~-~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|++||-||... ..+.+....+|+. +|...+..+.+. | -.-+|..||....+..+..
T Consensus 85 DIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~------------- 147 (261)
T KOG4169|consen 85 DILINGAGILD----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVF------------- 147 (261)
T ss_pred EEEEccccccc----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccc-------------
Confidence 79999999976 5668888899955 566666666544 2 1369999987443322211
Q ss_pred cccccccchhHHHHHHHHHHHHHHH-----HHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHh-CCCCccCCc---
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEF-----AEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQ-GSKDTQEHY--- 144 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~-----~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--- 144 (232)
..|+.||.-.=.+.+++ -++.|+.+..+.||.+- ..++.++-. +....+.+.
T Consensus 148 --------pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~-----------t~l~~~~~~~~~~~e~~~~~~~ 208 (261)
T KOG4169|consen 148 --------PVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTR-----------TDLAENIDASGGYLEYSDSIKE 208 (261)
T ss_pred --------hhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcch-----------HHHHHHHHhcCCcccccHHHHH
Confidence 37999887654444442 34669998888887651 112222222 111112220
Q ss_pred ---ccCceeHHhHHHHHHHhhcCCCCCceEEEec
Q 026820 145 ---WLGAVHVKDVAKAQVLLFETSAASGRYLCTN 175 (232)
Q Consensus 145 ---~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ 175 (232)
...--...+++..++.+++.+..+-.|.++.
T Consensus 209 ~l~~~~~q~~~~~a~~~v~aiE~~~NGaiw~v~~ 242 (261)
T KOG4169|consen 209 ALERAPKQSPACCAINIVNAIEYPKNGAIWKVDS 242 (261)
T ss_pred HHHHcccCCHHHHHHHHHHHHhhccCCcEEEEec
Confidence 1123356788888888888865444677654
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.087 Score=39.99 Aligned_cols=136 Identities=15% Similarity=0.044 Sum_probs=78.3
Q ss_pred CeEEEeecCCCC-CCCCC----chhhhHHHHHHHHHHHHHH----HHHcCCC-----------EEEEecccceeccCCCC
Q 026820 1 MGVFHLASPNTL-DDPKD----PEKELLIPAVQGTLNVLEA----AKKFGVR-----------RVVLTSSISSIVPNPNW 60 (232)
Q Consensus 1 D~Vih~a~~~~~-~~~~~----~~~~~~~~nv~~~~~l~~~----~~~~~~~-----------~~i~~Ss~~~~~~~~~~ 60 (232)
|++|+.||.... ..... ...+-+++|..++.-+.++ .++...+ .+|++||.+.--+.
T Consensus 86 nlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~--- 162 (249)
T KOG1611|consen 86 NLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG--- 162 (249)
T ss_pred eEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC---
Confidence 467888888655 22222 2345667886665554443 2333223 68889987442111
Q ss_pred CCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCC
Q 026820 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGS 137 (232)
Q Consensus 61 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 137 (232)
....+. ..|..||.+.-.+.+...-+ .++-++.+.||+|=- +++.
T Consensus 163 ---------~~~~~~------~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~T-----DMgg------------ 210 (249)
T KOG1611|consen 163 ---------FRPGGL------SAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQT-----DMGG------------ 210 (249)
T ss_pred ---------CCCcch------hhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEc-----CCCC------------
Confidence 111122 58999999999998887643 477788888888831 1100
Q ss_pred CCccCCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecCcc
Q 026820 138 KDTQEHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNGIY 178 (232)
Q Consensus 138 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~~~ 178 (232)
.-..+.+++-+.-++..+.+- ...|. |+-.+.++
T Consensus 211 -------~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~dlt~i 247 (249)
T KOG1611|consen 211 -------KKAALTVEESTSKLLASINKLKNEHNGGFFNRDGTPI 247 (249)
T ss_pred -------CCcccchhhhHHHHHHHHHhcCcccCcceEccCCCcC
Confidence 114566777777777776542 23343 45544443
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.092 Score=39.58 Aligned_cols=93 Identities=19% Similarity=0.173 Sum_probs=58.9
Q ss_pred CeEEEeecCCCCCCCCC----chhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDPKD----PEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|++||.||........+ .-+..+++|+-|..++.++.... --..+|+++|...+-.-+.
T Consensus 83 d~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf-------------- 148 (289)
T KOG1209|consen 83 DLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPF-------------- 148 (289)
T ss_pred EEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccch--------------
Confidence 67899999865422222 23677889988888877776533 1137999999844322221
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHH---HcCCcEEEEcCCCe
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAE---KNGTDVVAIHPATS 114 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ilR~~~i 114 (232)
.+.|..||...-.+.+-+.- -.|++++.+-+|.|
T Consensus 149 -------~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv 185 (289)
T KOG1209|consen 149 -------GSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGV 185 (289)
T ss_pred -------hhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccce
Confidence 15899999887766554432 23666666666655
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.11 Score=42.26 Aligned_cols=105 Identities=13% Similarity=0.077 Sum_probs=73.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCC-C-EEEEecccceeccCCCCCCCCccCCCCCCCccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGV-R-RVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCK 78 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~-~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~ 78 (232)
|+||.+||.... ...+..+++..|+...+.+.....+.+. . .+|.+|.- + .-.. ....+...-..+.
T Consensus 80 DivvitaG~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNP-v-D~~t----~~~~k~sg~~p~~--- 148 (322)
T cd01338 80 DWALLVGAKPRG--PGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNP-C-NTNA----LIAMKNAPDIPPD--- 148 (322)
T ss_pred CEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCc-H-HHHH----HHHHHHcCCCChH---
Confidence 789999998543 2345688999999999999999988762 3 45555532 1 0000 0001111101122
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCC
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFP 119 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~ 119 (232)
..|+.++...+++...+++..+++...+|...|||+..
T Consensus 149 ---~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG 186 (322)
T cd01338 149 ---NFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS 186 (322)
T ss_pred ---heEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence 47999999999999999999999999999889999863
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=90.15 E-value=4.6 Score=30.61 Aligned_cols=96 Identities=11% Similarity=0.121 Sum_probs=59.7
Q ss_pred CeEEEeecCCCCCCCC------CchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLDDPK------DPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~------~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
+++||+||........ ++..+-.+.|+.++..|..+.. +..-..+|.+||.-+.- +. +..
T Consensus 80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafv--Pm--------~~~ 149 (245)
T COG3967 80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFV--PM--------AST 149 (245)
T ss_pred heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccC--cc--------ccc
Confidence 5899999996541111 1224556778888877776654 33334799999842211 11 111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHH---HHcCCcEEEEcCCCeeCC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFA---EKNGTDVVAIHPATSLGP 117 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~---~~~~~~~~ilR~~~i~G~ 117 (232)
..|..+|...--+..++. +..++.+.=+-|+.|--+
T Consensus 150 -----------PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 150 -----------PVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred -----------ccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 269999988866655544 334788888888888653
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=89.26 E-value=1.4 Score=35.59 Aligned_cols=48 Identities=15% Similarity=0.004 Sum_probs=39.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSS 50 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss 50 (232)
|+||.++|.... ...+..+.+..|....+++++++.+.+.+++|.+.|
T Consensus 71 DiVIitaG~~~~--~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs 118 (312)
T PRK05086 71 DVVLISAGVARK--PGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT 118 (312)
T ss_pred CEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 789999998553 234567899999999999999999998888777665
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=85.59 E-value=0.3 Score=35.53 Aligned_cols=140 Identities=16% Similarity=0.157 Sum_probs=79.2
Q ss_pred CeEEEeecCCCC----------CCCCCchhhhHHHHHHHHHHHHHHHHHc-C-------CC--EEEEecccceeccCCCC
Q 026820 1 MGVFHLASPNTL----------DDPKDPEKELLIPAVQGTLNVLEAAKKF-G-------VR--RVVLTSSISSIVPNPNW 60 (232)
Q Consensus 1 D~Vih~a~~~~~----------~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~-------~~--~~i~~Ss~~~~~~~~~~ 60 (232)
|+.+||||.... .+.-++.+...++|+.||.|+++..... | -+ -+|..-|.+++.|...
T Consensus 85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g- 163 (260)
T KOG1199|consen 85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG- 163 (260)
T ss_pred eeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc-
Confidence 678999987432 1112233567789999999999764311 1 12 3666666644333322
Q ss_pred CCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCC
Q 026820 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGS 137 (232)
Q Consensus 61 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 137 (232)
+..|+.||-..--+..-.+++ .|+++..+-||.+--| -...+...++.++...
T Consensus 164 --------------------qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tp----llsslpekv~~fla~~ 219 (260)
T KOG1199|consen 164 --------------------QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTP----LLSSLPEKVKSFLAQL 219 (260)
T ss_pred --------------------hhhhhcccCceEeeechhhhhcccCceEEEeecccccCCh----hhhhhhHHHHHHHHHh
Confidence 147888886543332222322 3788888877765322 1223344455554443
Q ss_pred CCccCCcccCceeHHhHHHHHHHhhcCCCCCc
Q 026820 138 KDTQEHYWLGAVHVKDVAKAQVLLFETSAASG 169 (232)
Q Consensus 138 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 169 (232)
. .++. -.-|..+-+..+-.+++++-..|
T Consensus 220 i-pfps---rlg~p~eyahlvqaiienp~lng 247 (260)
T KOG1199|consen 220 I-PFPS---RLGHPHEYAHLVQAIIENPYLNG 247 (260)
T ss_pred C-CCch---hcCChHHHHHHHHHHHhCcccCC
Confidence 2 2332 23456777778888888887666
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=84.49 E-value=3.9 Score=33.33 Aligned_cols=48 Identities=17% Similarity=0.090 Sum_probs=36.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CC-EEEEecc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VR-RVVLTSS 50 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~-~~i~~Ss 50 (232)
|+|||+||.... ...+..+.+..|+...+.+.....+.. .+ .+|.+|.
T Consensus 80 DiVI~tAG~~~~--~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN 129 (325)
T cd01336 80 DVAILVGAMPRK--EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN 129 (325)
T ss_pred CEEEEeCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 799999999654 234568999999999999999988773 23 4555554
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd02905 Macro_GDAP2_like Macro domain, GDAP2_like family | Back alignment and domain information |
|---|
Probab=80.73 E-value=9.3 Score=26.92 Aligned_cols=46 Identities=20% Similarity=0.162 Sum_probs=28.8
Q ss_pred eEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecc
Q 026820 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSS 50 (232)
Q Consensus 2 ~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss 50 (232)
.|||+.|+... .....+..+.=-...++.++.|.+.+++.+.|..-
T Consensus 71 ~VIH~vgP~~~---~~~~~~~~~~L~~~~~~~L~~a~~~~~~SIAfPai 116 (140)
T cd02905 71 FIIHTVGPKYN---VKYRTAAENALYSCYRNVLQLAKELGLESIALCVI 116 (140)
T ss_pred EEEEecCCccC---CCCCcHHHHHHHHHHHHHHHHHHHcCCCEEEECCc
Confidence 69999998643 22122222222345678899999989887766543
|
The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. This family contains proteins similar to human GDAP2, the ganglioside induced differentiation associated protein 2, whose gene is expressed at a higher level in differentiated Neuro2a cells compared with non-differentiated cells. GDAP2 contains an N-terminal macro domain and a C-terminal |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 232 | ||||
| 2rh8_A | 338 | Structure Of Apo Anthocyanidin Reductase From Vitis | 3e-29 | ||
| 2c29_D | 337 | Structure Of Dihydroflavonol Reductase From Vitis V | 3e-28 | ||
| 2p4h_X | 322 | Crystal Structure Of Vestitone Reductase From Alfal | 9e-24 | ||
| 1ujm_A | 342 | Crystal Structure Of Aldehyde Reductase 2 From Spor | 1e-10 | ||
| 1y1p_A | 342 | X-Ray Structure Of Aldehyde Reductase With Nadph Le | 1e-10 | ||
| 3a1n_A | 317 | Crystal Structure Of L-Threonine Dehydrogenase From | 6e-06 | ||
| 3a9w_A | 317 | Crystal Structure Of L-Threonine Bound L-Threonine | 2e-05 |
| >pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338 | Back alignment and structure |
|
| >pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337 | Back alignment and structure |
|
| >pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322 | Back alignment and structure |
|
| >pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342 | Back alignment and structure |
|
| >pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342 | Back alignment and structure |
|
| >pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317 | Back alignment and structure |
|
| >pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 232 | |||
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 1e-89 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 5e-89 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 4e-88 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 1e-70 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 1e-44 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 2e-37 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 2e-17 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 4e-15 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 6e-14 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 3e-13 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 2e-12 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 1e-11 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 2e-11 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 2e-11 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 5e-10 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 1e-09 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 2e-09 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 7e-09 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 1e-08 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 3e-08 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 2e-07 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 2e-07 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 3e-07 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 4e-07 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 2e-06 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 4e-06 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 5e-06 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 5e-06 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 1e-05 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 1e-05 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 1e-05 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 2e-05 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 3e-05 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 3e-05 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 1e-04 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 1e-04 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 6e-04 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 8e-04 |
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 266 bits (683), Expect = 1e-89
Identities = 73/207 (35%), Positives = 115/207 (55%), Gaps = 13/207 (6%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNW 60
VFH+A+P +DPE +++ PA+QG +NV++A + V+RV+LTSS +++ N
Sbjct: 83 FVFHVATPVHFA-SEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLD 141
Query: 61 PQGKVIDETSWTDLDFCKSHK---IWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGP 117
G V+DE +WTD++F S K Y SKTLAEKAAW+FAE+N D++ + P G
Sbjct: 142 GTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGS 201
Query: 118 FPQPYVNASGAVLQRLLQGSK--------DTQEHYWLGAVHVKDVAKAQVLLFETSAASG 169
V +S + L+ G++ + HV+DV +A + + E +ASG
Sbjct: 202 SLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESASG 261
Query: 170 RYLCTNGIYQFAEFAEKVSKLFPEYPI 196
RY+C E A+ +SK +P+Y +
Sbjct: 262 RYICCAANTSVPELAKFLSKRYPQYKV 288
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 264 bits (677), Expect = 5e-89
Identities = 73/199 (36%), Positives = 105/199 (52%), Gaps = 7/199 (3%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNW 60
G+FH ASP +PE+ + V G L +L+A V+R + TSS S++ + N
Sbjct: 77 GIFHTASPIDFA-VSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAV--SFNG 133
Query: 61 PQGKVIDETSWTDLDFCKSHKIW---YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGP 117
V+DE+ W+D+D +S K + Y++SKTLAEKA EF E+NG DVV + +G
Sbjct: 134 KDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGR 193
Query: 118 FPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGI 177
F P + S L+ G K+ VHV DVA+A + L E S GRY C+ I
Sbjct: 194 FVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENSVPGGRYNCSPFI 253
Query: 178 YQFAEFAEKVSKLFPEYPI 196
E ++ +S +PEY I
Sbjct: 254 VPIEEMSQLLSAKYPEYQI 272
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 262 bits (673), Expect = 4e-88
Identities = 68/200 (34%), Positives = 112/200 (56%), Gaps = 8/200 (4%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNW 60
GVFH+A+P + KDPE E++ P ++G L ++++ VRR+V TSS ++ N
Sbjct: 80 GVFHVATPMDFE-SKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTV--NIQE 136
Query: 61 PQGKVIDETSWTDLDFCKSHKI---WYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGP 117
Q V DE+ W+D++FC++ K+ Y +SKTLAE+AAW++A++N D + I P +GP
Sbjct: 137 HQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGP 196
Query: 118 FPQPYVNASGAVLQRLLQGSKDTQE-HYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNG 176
F + S + G++ VH+ D+ A + LFE A GRY+C++
Sbjct: 197 FIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEGRYICSSH 256
Query: 177 IYQFAEFAEKVSKLFPEYPI 196
+ A+ + + +PEY I
Sbjct: 257 DCIILDLAKMLREKYPEYNI 276
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 218 bits (558), Expect = 1e-70
Identities = 54/213 (25%), Positives = 81/213 (38%), Gaps = 21/213 (9%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNW 60
GV H+AS + + E++ PA+ GTLN L AA V+R VLTSS S +
Sbjct: 86 GVAHIASVVSFSNK---YDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPN 142
Query: 61 PQGKVIDETSWTDLDFCKSHK----------IWYSMSKTLAEKAAWEFAEKNGT--DVVA 108
+G +DE SW K+ Y+ SKT AE AAW+F ++N + A
Sbjct: 143 VEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNA 202
Query: 109 IHPATSLGPFPQPYVNA--SGAVLQRLLQGSKDTQEHYWLGA--VHVKDVAKAQVLLFET 164
+ P ++G P + + + L G V D+ +
Sbjct: 203 VLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL 262
Query: 165 SAASG-RYLCTNGIYQFAEFAEKVSKLFPEYPI 196
R T G + + KL+P
Sbjct: 263 PQIERRRVYGTAGTFDWNTVLATFRKLYPSKTF 295
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 1e-44
Identities = 41/190 (21%), Positives = 69/190 (36%), Gaps = 10/190 (5%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
GV A P+ + E + A+ T A + V R++ S ++ P P
Sbjct: 80 GVIFSAGYYPSR-PRRWQ-EEVASALGQTNPFYAACLQARVPRILYVGSAYAM---PRHP 134
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
QG E + D S K Y + K ++ A E A +NG VV P LG
Sbjct: 135 QGLPGHEGLF--YDSLPSGKSSYVLCKWALDEQAREQA-RNGLPVVIGIPGMVLG--ELD 189
Query: 122 YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA 181
+G V+ + G + + + ++ E RYL T + A
Sbjct: 190 IGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHNLEMA 249
Query: 182 EFAEKVSKLF 191
+ ++++L
Sbjct: 250 DLTRRIAELL 259
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 2e-37
Identities = 26/174 (14%), Positives = 52/174 (29%), Gaps = 29/174 (16%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
V +P + ++ ++ L +++ KK GV R ++ S+ P
Sbjct: 70 AVISAFNPGWNN------PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLR 123
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
+D + + K L E ++ D V PA + P +
Sbjct: 124 -----------LMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRT 172
Query: 122 --YVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLC 173
Y ++ ++ S + V+D A A + E
Sbjct: 173 GRYRLGKDDMIVDIVGNSH----------ISVEDYAAAMIDELEHPKHHQERFT 216
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 2e-17
Identities = 48/209 (22%), Positives = 80/209 (38%), Gaps = 26/209 (12%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQ 62
+FHLA + KDP + + GT N+LEAAK+ V +VV+ S+I P P+
Sbjct: 66 IFHLAGILSAKGEKDPALAYKV-NMNGTYNILEAAKQHRVEKVVIPSTIGVFGPET--PK 122
Query: 63 GKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY 122
KV T + ++K AE + EK G DV ++ + +P
Sbjct: 123 NKVPSITITRPRTM-------FGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPT 175
Query: 123 VNASG---AVLQRLLQGSK------DTQEHYWLGAVHVKDVAKAQVLLFETSAASGR--- 170
+ + ++ K + +++ D KA V L+E
Sbjct: 176 AGTTDYAVEIFYYAVKREKYKCYLAPNRALPM---MYMPDALKALVDLYEADRDKLVLRN 232
Query: 171 -YLCTNGIYQFAEFAEKVSKLFPEYPIHR 198
Y T + +E K+ + PE+ I
Sbjct: 233 GYNVTAYTFTPSELYSKIKERIPEFEIEY 261
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 4e-15
Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 20/131 (15%)
Query: 2 GVFHLA---SPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNP 58
G+ HL +D + G N+ EAA+ G R+V SS +I P
Sbjct: 66 GIIHLGGVSVERPWNDILQAN-------IIGAYNLYEAARNLGKPRIVFASSNHTIGYYP 118
Query: 59 NWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 118
+ ID D S Y +SK E A + K + + I +
Sbjct: 119 RTTR---IDTEVPRRPD---SL---YGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPK- 168
Query: 119 PQPYVNASGAV 129
P+ + +
Sbjct: 169 PKDARMMATWL 179
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 68.2 bits (167), Expect = 6e-14
Identities = 27/132 (20%), Positives = 44/132 (33%), Gaps = 16/132 (12%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
G+ HL + + L + G N+ EAA+ G R+V SS +I +P
Sbjct: 67 GIVHLGGISVEKPFEQI----LQGNIIGLYNLYEAARAHGQPRIVFASSNHTI---GYYP 119
Query: 62 QGKVIDETSWTD-LDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQ 120
Q + + Y +SK E A + +K G + + + P
Sbjct: 120 QTERLGPDVPARPDGL-------YGVSKCFGENLARMYFDKFGQETALVRIGSCTPE-PN 171
Query: 121 PYVNASGAVLQR 132
Y S
Sbjct: 172 NYRMLSTWFSHD 183
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 3e-13
Identities = 32/217 (14%), Positives = 70/217 (32%), Gaps = 51/217 (23%)
Query: 3 VFHLAS----PNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNP 58
V HLA+ + + D T N+ +A + + +V S+IS+
Sbjct: 66 VVHLAATRGSQGKISEFHD--------NEILTQNLYDACYENNISNIVYASTISAYSDET 117
Query: 59 NWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 118
+ P +E Y +SK E ++ K G + + A G
Sbjct: 118 SLP----WNEKELPL---PDLM---YGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFN 167
Query: 119 PQPYVNASGAV---LQRLLQG-----------SKDTQEHYWLGAVHVKDVAKAQVLLFET 164
+ + + ++ G ++ + ++ KD AK+ + +
Sbjct: 168 EKN----NYMINRFFRQAFHGEQLTLHANSVAKRE-----F---LYAKDAAKSVIYALKQ 215
Query: 165 SAASGRY-LCTNGIYQFAEFAEKVSKLF--PEYPIHR 198
SG + + + E A ++ F + + +
Sbjct: 216 EKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVK 252
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 2e-12
Identities = 33/206 (16%), Positives = 60/206 (29%), Gaps = 34/206 (16%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQ 62
+ HLA N + K+ V +VL+ + + +L S SSI + P
Sbjct: 50 IVHLAGVNRPEHDKEFSLG----NVSYLDHVLDILTRNTKKPAILLS--SSIQATQDNP- 102
Query: 63 GKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP- 121
Y SK E+ E+AE+ G V G + +P
Sbjct: 103 ---------------------YGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPN 141
Query: 122 YVNASGAVLQRLLQGS--KDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQ 179
Y + ++ + + + L +V D+ E + + T
Sbjct: 142 YNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVF 201
Query: 180 ---FAEFAEKVSKLFPEYPIHRFVCV 202
E + + K +
Sbjct: 202 KVTLGEIVDLLYKFKQSRLDRTLPKL 227
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 62.1 bits (152), Expect = 1e-11
Identities = 34/217 (15%), Positives = 65/217 (29%), Gaps = 52/217 (23%)
Query: 2 GVFHLAS----PNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSS-----IS 52
V+H+A+ ++P + + V T +LEA +K GV R+V TS+ +
Sbjct: 66 EVWHIAANPDVRIGAENPDEIYRN----NVLATYRLLEAMRKAGVSRIVFTSTSTVYGEA 121
Query: 53 SIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPA 112
++P E T S Y SK E + A
Sbjct: 122 KVIP---------TPEDYPTH---PISL---YGASKLACEALIESYCHTFDMQAWIYRFA 166
Query: 113 TSLGPFPQPYVNASGAVLQRLLQG-----------SKDTQEHYWLGAVHVKDVAKAQVLL 161
+G + +++ +K Y +++ D A +
Sbjct: 167 NVIGR-RSTHGVIYDFIMKLKRNPEELEILGNGEQNKS----Y----IYISDCVDAMLFG 217
Query: 162 FETSAASGRYLCTNG----IYQFAEFAEKVSKLFPEY 194
+ + + + AE + L P +
Sbjct: 218 LRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRF 254
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 2e-11
Identities = 41/214 (19%), Positives = 75/214 (35%), Gaps = 39/214 (18%)
Query: 3 VFHLASPNTLDD-PKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNW 60
VFHLA+ + DP + TL + E K F +++VV +++ + +
Sbjct: 103 VFHLATYHGNQSSIHDPLADHEN-NTLTTLKLYERLKHFKRLKKVVYSAA-GCSIAEKTF 160
Query: 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQ 120
K +ET L S YSMSK E + + +++ V GP
Sbjct: 161 DDAKATEETDIVSLHNNDS---PYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEI 217
Query: 121 PYV--------NASGAV----LQRLLQG-----------SKDTQEHYWLGAVHVKDVAKA 157
V + + L+G ++D + + V+DVA
Sbjct: 218 LGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRD-----F---IFVEDVANG 269
Query: 158 QVLLFETSAASGRY-LCTNGIYQFAEFAEKVSKL 190
+ G Y + + A+ A K++++
Sbjct: 270 LIACAADGTPGGVYNIASGKETSIADLATKINEI 303
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 2e-11
Identities = 37/219 (16%), Positives = 56/219 (25%), Gaps = 52/219 (23%)
Query: 3 VFHLAS----PNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSI---- 54
V+HLAS P + P D V ++L GV +VV+ S+ +
Sbjct: 73 VYHLASHKSVPRSFKQPLDYLD-----NVDSGRHLLALCTSVGVPKVVVGST-CEVYGQA 126
Query: 55 --VPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAI-HP 111
+P E S Y+ SK E A + V I
Sbjct: 127 DTLP---------TPEDSPLSPRSP------YAASKVGLEMVAGAHQRASVAPEVGIVRF 171
Query: 112 ATSLGPFPQPYVNASGAV---LQRLLQGSKDTQEHYWLGA-------VHVKDVAKAQVLL 161
G P V LL ++ G ++ DV V L
Sbjct: 172 FNVYG----PGERPDALVPRLCANLLTRNELPV----EGDGEQRRDFTYITDVVDKLVAL 223
Query: 162 FETSAASGRY-LCTNGIYQFAEFAEKVSKLFPEYPIHRF 199
+ + + P + R
Sbjct: 224 AN-RPLPSVVNFGSGQSLSVNDVIRILQATSPAAEVARK 261
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 5e-10
Identities = 40/186 (21%), Positives = 63/186 (33%), Gaps = 44/186 (23%)
Query: 2 GVFHLAS----PNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSI--V 55
VFH A+ + +P E V T NVLE A++ GVR VV SS S++
Sbjct: 65 VVFHFAANPEVRLSTTEPIVHFNE----NVVATFNVLEWARQTGVRTVVFASS-STVYGD 119
Query: 56 PNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSL 115
P E S Y +K E +A G +A+ A +
Sbjct: 120 A-DVIP----TPEEEPYK---PISV---YGAAKAAGEVMCATYARLFGVRCLAVRYANVV 168
Query: 116 GPFPQPYVNASGAVLQRLLQG------------SKDTQEHYWLGAVHVKDVAKAQVLLFE 163
GP + V + +L + K Y ++V+D +A + ++
Sbjct: 169 GPRLRHGVIY--DFIMKLRRNPNVLEVLGDGTQRKS----Y----LYVRDAVEATLAAWK 218
Query: 164 TSAASG 169
Sbjct: 219 KFEEMD 224
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-09
Identities = 28/186 (15%), Positives = 59/186 (31%), Gaps = 29/186 (15%)
Query: 27 VQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIW--- 83
+ +VL AK ++++ SSI+ P T + + I
Sbjct: 95 MNSLFHVLNLAKAKKIKKIFWPSSIAVFGPT--------------TPKENTPQYTIMEPS 140
Query: 84 --YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQ---RLLQGSK 138
Y +SK E+ + G DV +I + P + + + + K
Sbjct: 141 TVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKK 200
Query: 139 DT---QEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQF----AEFAEKVSKLF 191
+ +++ D A + + + + + + E A ++ K
Sbjct: 201 YECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHI 260
Query: 192 PEYPIH 197
PE+ I
Sbjct: 261 PEFTIT 266
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 2e-09
Identities = 46/194 (23%), Positives = 68/194 (35%), Gaps = 29/194 (14%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQ 62
V H A+ + DP D + L G NV++AAKK V R V + P
Sbjct: 93 VVHTAA--SYKDPDDWYNDTLT-NCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQP 149
Query: 63 GKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY 122
+ + S Y++SK+ E + E +G D V A +GP
Sbjct: 150 ---VRLD--HPRNPANSS---YAISKSANED----YLEYSGLDFVTFRLANVVGPRNVSG 197
Query: 123 VNASGAVLQRLLQGSKDTQEHYWLGA-----VHVKDVAKAQVLLFETSAASGRY-LCTNG 176
QRL +G K + V VKD+A+A V + G Y +
Sbjct: 198 PLPI--FFQRLSEGKKCF-----VTKARRDFVFVKDLARATVRAVD-GVGHGAYHFSSGT 249
Query: 177 IYQFAEFAEKVSKL 190
E + V +
Sbjct: 250 DVAIKELYDAVVEA 263
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 7e-09
Identities = 38/189 (20%), Positives = 68/189 (35%), Gaps = 45/189 (23%)
Query: 3 VFHLAS----PNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIV-PN 57
V H A+ P +++DP + G LN+L AA+ V+ +S SS +
Sbjct: 106 VLHQAALGSVPRSINDPITSNATN----IDGFLNMLIAARDAKVQSFTYAAS-SSTYGDH 160
Query: 58 PNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGP 117
P P E + + S Y+++K + E A F+ G + + G
Sbjct: 161 PGLP----KVEDT---IGKPLSP---YAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGR 210
Query: 118 FPQPYVNASGAVL----QRLLQG-----------SKDTQEHYWLGAVHVKDVAKAQVL-L 161
Q A AV+ ++QG S+D ++++ +A +L
Sbjct: 211 R-QDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDF--------CYIENTVQANLLAA 261
Query: 162 FETSAASGR 170
A +
Sbjct: 262 TAGLDARNQ 270
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 52.9 bits (128), Expect = 1e-08
Identities = 46/210 (21%), Positives = 73/210 (34%), Gaps = 70/210 (33%)
Query: 2 GVFHLAS----PNTLDDP-KDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVP 56
V H A+ +++DP D E + G LN+LEA +++GV ++V S+ +I
Sbjct: 69 HVSHQAAQASVKVSVEDPVLDFEVN-----LLGGLNLLEACRQYGVEKLVFASTGGAIYG 123
Query: 57 NPNWPQGKVIDETSWTD-LDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSL 115
P+G+ +ET Y+ SK E + + G V++
Sbjct: 124 EV--PEGERAEETWPPRPKSP-------YAASKAAFEHYLSVYGQSYGLKWVSLR----- 169
Query: 116 GPFPQPYVNASGA-------------VLQRLLQGSK----------------DTQEHYWL 146
Y N G +R+L+G D Y
Sbjct: 170 ------YGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRD----Y-- 217
Query: 147 GAVHVKDVAKAQVLLFETSAASGRYLCTNG 176
V+V DVA+A L + G Y G
Sbjct: 218 --VYVGDVAEAHALALF--SLEGIYNVGTG 243
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 3e-08
Identities = 41/228 (17%), Positives = 63/228 (27%), Gaps = 37/228 (16%)
Query: 2 GVFHLAS----PNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPN 57
V H P ++ D V GTLNVL A K+FG ++
Sbjct: 103 SVVHFGEQRSAPYSMIDRSRA-VYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGT 161
Query: 58 PNWPQGKV---IDETSWTDLDFCKSHKI-WYSMSKTLAEKAAWEFAEKNGTDVVAIHPAT 113
PN + I TD +Y +SK + G ++
Sbjct: 162 PNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGV 221
Query: 114 SLGPFPQP------------YVNASGAVLQRL----LQGS------KDTQEHYWLGAVHV 151
G Y G L R G K Q +L +
Sbjct: 222 VYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYL---DI 278
Query: 152 KDVAKAQVLLFETSAASGRYLCTNG---IYQFAEFAEKVSKLFPEYPI 196
+D + + A +G + N + E A V+K + +
Sbjct: 279 RDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGL 326
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 49.2 bits (117), Expect = 2e-07
Identities = 14/148 (9%), Positives = 41/148 (27%), Gaps = 21/148 (14%)
Query: 25 PAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWY 84
V +++ R+++ +S+ + +++ + + + +
Sbjct: 78 KHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDE--DGNTLLESKGLREAPYYPTARAQ- 134
Query: 85 SMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQ--PYVNASGAVLQRLLQGSKDTQE 142
A++ + + I P+ P + Y +L S
Sbjct: 135 ------AKQLEHLKSHQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSF---- 184
Query: 143 HYWLGAVHVKDVAKAQVLLFETSAASGR 170
+ ++D A A + E
Sbjct: 185 ------ISMEDYAIAVLDEIERPNHLNE 206
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-07
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 3 VFHLASPNTLDD-PKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNW- 60
++HLASP + + +P K L GTLN+L AK+ G R +L +S S + +P
Sbjct: 95 IYHLASPASPPNYMYNPIKTLKT-NTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVH 151
Query: 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVV 107
PQ E W ++ Y K +AE + + ++ G +V
Sbjct: 152 PQ----SEDYWGHVNPIGPRAC-YDEGKRVAETMCYAYMKQEGVEVR 193
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 3e-07
Identities = 43/216 (19%), Positives = 69/216 (31%), Gaps = 73/216 (33%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPA---VQGTLNVLEAAKKFGVRRVVLTSS-----ISS 53
V H A+ DP D + A VQG++NV +AA K GV+R++ + +
Sbjct: 91 HVVHSAA--AYKDPDDWAE----DAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPA 144
Query: 54 IVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPAT 113
VP I S T + Y +SKT E F + VV++
Sbjct: 145 TVP---------IPIDSPTA---PFTS---YGISKTAGEA----FLMMSDVPVVSLR--- 182
Query: 114 SLGPFPQPYVNASGA---------VLQRLLQGSK--------DTQEHYWLGAVHVKDVAK 156
N +G +RL G K D + + + D
Sbjct: 183 --------LANVTGPRLAIGPIPTFYKRLKAGQKCFCSDTVRD----F----LDMSDFLA 226
Query: 157 AQVLLFETSAASGRYLCTNG----IYQFAEFAEKVS 188
L + +G + + G I + +
Sbjct: 227 IADLSLQEGRPTGVFNVSTGEGHSIKEVFDVVLDYV 262
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 4e-07
Identities = 41/215 (19%), Positives = 73/215 (33%), Gaps = 32/215 (14%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVR-----RVVLTSSISSIVP 56
+FHLA+ + + D +K I + GT + +A + + RVV TSSI+
Sbjct: 89 VIFHLAAIVSGEAELDFDKGYRI-NLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGA 147
Query: 57 NPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLG 116
P I + T + Y K + E +++ + D + I T
Sbjct: 148 ----PLPYPIPDEFHTT---PLTS---YGTQKAICELLLSDYSRRGFFDGIGIRLPTICI 197
Query: 117 PFPQPYVNASG---AVLQRLLQGSK------DTQEHYWLGAVHVKDVAKAQVLLFETSAA 167
+P ASG +L+ L G + ++ H+ + +
Sbjct: 198 RPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWH---ASPRSAVGFLIHGAMIDVE 254
Query: 168 ---SGRYLCTNGI-YQFAEFAEKVSKLFPEYPIHR 198
R L G+ E E + K+ E +
Sbjct: 255 KVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVAL 289
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-06
Identities = 40/218 (18%), Positives = 76/218 (34%), Gaps = 31/218 (14%)
Query: 3 VFHLASPNTLDD-PKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNW- 60
V L + T + ++P + + + L ++ K+ R ++ S S + +
Sbjct: 71 VLPLVAIATPIEYTRNPLRVFEL-DFEENLRIIRYCVKYRKR--IIFPSTSEVYGMCSDK 127
Query: 61 PQGKVIDETSWTDLDFCKSHKI-W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGP- 117
DE +L +K W YS+SK L ++ W + EK G P +GP
Sbjct: 128 YF----DEDHS-NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPR 182
Query: 118 ---FPQPYVNASGAV---LQRLLQGSKDTQEHYWLGA-----VHVKDVAKAQVLLFETSA 166
+ +S A+ + L++GS G ++D +A + E +
Sbjct: 183 LDNLNAARIGSSRAITQLILNLVEGSPIKL--IDGGKQKRCFTDIRDGIEALYRIIENAG 240
Query: 167 ASGRYLCTN-----GIYQFAEFAEKVSKLFPEYPIHRF 199
N E E + F ++P+
Sbjct: 241 NRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHH 278
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 4e-06
Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 24/126 (19%)
Query: 3 VFHLASP------NTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVP 56
VF+LA+ + ++ + N++EAA+ G++R SS + I P
Sbjct: 97 VFNLAADMGGMGFIQSNH-----SVIMYNNTMISFNMIEAARINGIKRFFYASS-ACIYP 150
Query: 57 NPNWPQGKVIDETSWTDL-----DFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHP 111
+D + + K E+ + + G +
Sbjct: 151 EFK-QLETTNVSLKESDAWPAEPQDA------FGLEKLATEELCKHYNKDFGIECRIGRF 203
Query: 112 ATSLGP 117
GP
Sbjct: 204 HNIYGP 209
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 5e-06
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 9/56 (16%)
Query: 3 VFHLAS----PNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSI 54
V H A+ P ++ DP + G LN+L AAK V+ +S SS
Sbjct: 104 VLHQAALGSVPRSIVDPITTNAT----NITGFLNILHAAKNAQVQSFTYAAS-SST 154
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 5e-06
Identities = 29/208 (13%), Positives = 61/208 (29%), Gaps = 32/208 (15%)
Query: 3 VFHLA----SPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNP 58
+FH + ++ Q + +L + + + +S ++
Sbjct: 72 IFHEGACSSTTEWDGKY------MMDNNYQYSKELLHYCLEREIPFLY--ASSAATYGGR 123
Query: 59 NWPQGKVIDETSWTD-LDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGP 117
I+ + L+ Y SK L ++ + + + +V GP
Sbjct: 124 TSDF---IESREYEKPLNV-------YGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGP 173
Query: 118 FPQPYVNASGAVLQRLLQGSKDTQEHYWLGA-------VHVKDVAKAQVLLFETSAASGR 170
+ + Q + + G+ V+V DVA + E + SG
Sbjct: 174 REGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE-NGVSGI 232
Query: 171 Y-LCTNGIYQFAEFAEKVSKLFPEYPIH 197
+ L T F A+ + I
Sbjct: 233 FNLGTGRAESFQAVADATLAYHKKGQIE 260
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 1e-05
Identities = 29/208 (13%), Positives = 61/208 (29%), Gaps = 32/208 (15%)
Query: 3 VFHLA----SPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNP 58
+FH + ++ Q + +L + + + SS ++
Sbjct: 119 IFHEGACSSTTEWDGKY------MMDNNYQYSKELLHYCLEREI-PFLYASS-AATYGGR 170
Query: 59 NWPQGKVIDETSWTD-LDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGP 117
I+ + L+ + SK L ++ + + + +V GP
Sbjct: 171 TSDF---IESREYEKPLNV-------FGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGP 220
Query: 118 FPQPYVNASGAVLQRLLQGSKDTQEHYWLGA-------VHVKDVAKAQVLLFETSAASGR 170
+ + Q + + G+ V+V DVA + E + SG
Sbjct: 221 REGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE-NGVSGI 279
Query: 171 Y-LCTNGIYQFAEFAEKVSKLFPEYPIH 197
+ L T F A+ + I
Sbjct: 280 FNLGTGRAESFQAVADATLAYHKKGQIE 307
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-05
Identities = 21/144 (14%), Positives = 53/144 (36%), Gaps = 35/144 (24%)
Query: 27 VQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSM 86
+ G + ++ A+K G++R ++ SS+ + + ++ Y +
Sbjct: 108 LWGAIKTIQEAEKRGIKRFIMVSSVGT-------------VDPDQGPMNM-----RHYLV 149
Query: 87 SKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146
+K LA+ + +++ D + P GP ++ ++ ++
Sbjct: 150 AKRLAD----DELKRSSLDYTIVRP----GPL------SNEESTGKVTVSPHFSE---IT 192
Query: 147 GAVHVKDVAKAQVLLFETSAASGR 170
++ DVAK L + G+
Sbjct: 193 RSITRHDVAKVIAELVDQQHTIGK 216
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 1e-05
Identities = 26/143 (18%), Positives = 41/143 (28%), Gaps = 29/143 (20%)
Query: 28 QGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMS 87
G N ++AAK GV+ +V+ S+ + + + +W
Sbjct: 111 IGQKNQIDAAKVAGVKHIVVVGSM------------GGTNPDHPLNKLGNGNILVW---- 154
Query: 88 KTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147
K AE+ +GT I L LL G D
Sbjct: 155 KRKAEQY----LADSGTPYTIIRAGGLLDKEGGVR---------ELLVGKDDELLQTDTK 201
Query: 148 AVHVKDVAKAQVLLFETSAASGR 170
V DVA+ + A +
Sbjct: 202 TVPRADVAEVCIQALLFEEAKNK 224
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-05
Identities = 31/175 (17%), Positives = 57/175 (32%), Gaps = 43/175 (24%)
Query: 27 VQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSM 86
+ G + +++AA+K V+R +L S+I S+ P + D Y +
Sbjct: 83 LYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGA----GFDALKD----------YYI 128
Query: 87 SKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146
+K A+ ++ D I P GA+ + G D +
Sbjct: 129 AKHFADLYL---TKETNLDYTIIQP---------------GALTEEEATGLIDINDEVS- 169
Query: 147 GAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFA----EFAEKVSKLFPEYPIH 197
+ + DVA L T + G+ + E + L + H
Sbjct: 170 ASNTIGDVADTIKELVMTDHSIGK------VISMHNGKTAIKEALESLLEHHHHH 218
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 42.7 bits (100), Expect = 3e-05
Identities = 16/145 (11%), Positives = 36/145 (24%), Gaps = 18/145 (12%)
Query: 26 AVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYS 85
+ +++ + V + S S +P + P E++ + +
Sbjct: 82 HLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFPESAASQP---------WY 132
Query: 86 MSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYW 145
+ + I P+ + P A L G
Sbjct: 133 DGALYQYYEYQFLQMNANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQ-------- 184
Query: 146 LGAVHVKDVAKAQVLLFETSAASGR 170
+ ++A A + E A
Sbjct: 185 -SHITTGNMALAILDQLEHPTAIRD 208
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 3e-05
Identities = 42/216 (19%), Positives = 78/216 (36%), Gaps = 36/216 (16%)
Query: 3 VFHLASPNTLDD-PKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVL--TSSISSIVPNPN 59
+ L + T K P + + + L ++ +A K+G + +V TS + + +
Sbjct: 95 ILPLVAIATPATYVKQPLRVFEL-DFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQ 152
Query: 60 W-PQGKVIDETSWTDLDFCKSHKI-W-YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLG 116
+ P L + +K W Y+ SK L ++ W + G + P +G
Sbjct: 153 FDPDAS--------ALTYGPINKPRWIYACSKQLMDRVIWGYG-MEGLNFTLFRPFNWIG 203
Query: 117 P----FPQPYVNASGAV---LQRLLQGSKDTQEHYWLGA-----VHVKDVAKAQVLLFET 164
P P +S V L +++G + G+ +V D A + + E
Sbjct: 204 PGLDSIYTPKEGSSRVVTQFLGHIVRGENISL--VDGGSQKRAFTYVDDGISALMKIIEN 261
Query: 165 SAASGRYLCTN-----GIYQFAEFAEKVSKLFPEYP 195
S N + E A K+ +L E+P
Sbjct: 262 SNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFP 297
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 1e-04
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 28 QGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
+G N++ A K GV +VV +S + P
Sbjct: 89 EGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP 122
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 1e-04
Identities = 18/118 (15%), Positives = 30/118 (25%), Gaps = 3/118 (2%)
Query: 25 PAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD-LDFCKSHKIW 83
P V GT ++ A ++ S+ + D +
Sbjct: 189 PNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGG 248
Query: 84 YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP-YVNASGAVLQRLLQGSKDT 140
Y SK E E + V L +N S + R++ T
Sbjct: 249 YGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDW-VTRMVLSLMAT 305
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 39.2 bits (92), Expect = 6e-04
Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 9/47 (19%)
Query: 5 HLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSI 51
S D+ + NV++AA+ GV+ + T
Sbjct: 71 LFISGPHYDNTL---------LIVQHANVVKAARDAGVKHIAYTGYA 108
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 38.5 bits (90), Expect = 8e-04
Identities = 27/180 (15%), Positives = 52/180 (28%), Gaps = 38/180 (21%)
Query: 3 VFHLASPNTLDDPKDPEKELL---IPA------------VQGTLNVLEAAKKFGVRRVVL 47
+ + P+TL E+L + A V+G N L A + ++ V
Sbjct: 47 IADVTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFF 106
Query: 48 TSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVV 107
SS V + +DE + K + AE +
Sbjct: 107 VSSTG--VYGQE--VEEWLDEDTPPI------AKDFSGKRMLEAEALLAAY------SST 150
Query: 108 AIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAA 167
+ + GP ++++ + + W +H D A L + +
Sbjct: 151 ILRFSGIYGP-------GRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSH 203
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 232 | |||
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.96 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.96 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.96 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.95 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.95 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.95 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.95 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.94 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.94 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.94 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.94 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.94 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.94 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.94 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.94 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.94 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.94 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.94 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.93 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.93 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.93 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.93 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.93 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.93 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.93 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.93 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.93 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.93 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.93 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.93 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.93 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.93 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.93 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.93 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.92 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.92 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.92 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.92 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.92 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.92 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.92 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.92 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.92 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.92 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.91 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.91 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.91 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.91 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.91 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.91 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.9 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.9 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.9 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.9 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.9 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.89 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.89 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.89 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.89 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.88 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.87 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.87 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.87 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.87 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.87 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.87 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.82 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.82 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.82 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.81 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.8 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.78 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.75 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.75 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.74 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.73 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.72 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.71 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.69 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.67 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.61 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.59 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.58 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.58 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.56 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.53 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.53 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.5 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.5 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.5 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.5 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.46 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.45 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.45 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.43 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.4 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.39 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.37 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.37 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.36 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.36 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.36 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.35 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.35 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.35 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.34 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.33 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.32 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.32 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.31 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.31 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.31 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.3 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.3 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.3 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.29 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.28 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.28 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.27 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.27 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.27 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.26 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.26 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.26 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.26 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.26 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.25 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.25 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.25 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.25 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.24 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.24 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.24 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.24 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.24 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.24 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.24 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.23 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.23 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.23 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.23 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.23 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.22 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.22 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.22 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.22 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.21 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.21 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.21 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.21 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.21 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.21 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.21 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.21 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.2 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.2 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.19 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.19 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.19 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.19 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.19 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.19 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.19 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.19 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.18 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.18 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.18 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.18 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.18 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.18 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.17 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.17 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.17 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.17 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.16 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.16 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.16 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.16 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.16 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.16 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.16 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.16 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.16 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.15 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.15 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.15 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.15 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.14 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.14 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.14 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.14 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.14 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.14 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.14 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.14 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.13 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.13 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.12 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.12 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.12 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.12 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.12 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.11 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.11 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.11 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.11 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.11 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.1 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.1 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.1 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.1 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.1 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.09 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.09 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.09 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.09 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.09 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.09 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.09 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.09 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.08 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.08 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.08 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.07 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.07 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.07 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.06 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.06 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.06 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.06 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.06 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.05 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.05 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.05 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.05 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.05 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.05 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.05 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.05 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.04 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.04 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.04 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.04 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.04 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.03 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.03 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.03 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.02 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.02 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.01 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.01 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.01 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.01 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.01 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.0 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.0 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.0 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.0 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 98.99 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 98.99 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 98.99 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 98.98 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 98.97 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 98.97 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.97 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 98.97 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.96 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 98.96 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 98.96 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 98.95 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 98.95 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.95 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 98.91 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 98.91 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.9 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 98.88 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.87 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 98.87 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 98.87 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 98.86 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 98.86 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 98.86 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 98.83 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.82 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 98.82 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 98.81 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 98.79 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.78 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 98.72 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 98.7 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 98.66 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.62 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.6 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.58 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.57 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.57 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.56 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.55 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.55 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.51 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 98.5 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.46 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.42 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 98.27 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.08 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 97.83 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.67 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 97.62 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 97.59 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 97.47 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 96.66 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 96.47 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 96.25 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 96.09 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 96.06 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 96.05 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 95.72 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 95.47 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 92.53 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 91.07 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 81.34 |
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.6e-28 Score=192.06 Aligned_cols=177 Identities=18% Similarity=0.164 Sum_probs=151.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+.... . ++...++.|+.++.+++++|++.++++|||+||. .+|+... ..+++|+++..|.
T Consensus 64 d~Vih~a~~~~~---~-~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~-~vyg~~~---~~~~~E~~~~~p~----- 130 (311)
T 3m2p_A 64 DAVVHLAATRGS---Q-GKISEFHDNEILTQNLYDACYENNISNIVYASTI-SAYSDET---SLPWNEKELPLPD----- 130 (311)
T ss_dssp SEEEECCCCCCS---S-SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEG-GGCCCGG---GCSBCTTSCCCCS-----
T ss_pred CEEEEccccCCC---C-ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccH-HHhCCCC---CCCCCCCCCCCCC-----
Confidence 799999999775 2 6788999999999999999999999999999996 7787654 4568999887776
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cC--CcccCceeHHhHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QE--HYWLGAVHVKDVAKA 157 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~~ 157 (232)
+.|+.+|..+|+++..++++.+++++++||+.+||+...+. ..+..++..+..+.++. ++ +..++++|++|+|++
T Consensus 131 -~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a 208 (311)
T 3m2p_A 131 -LMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKS 208 (311)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHH
T ss_pred -chhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHH
Confidence 59999999999999999888899999999999999987654 46777888888888776 44 467899999999999
Q ss_pred HHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 158 QVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 158 ~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
++.++.++...+.|+++ ++.+|+.|+++.+++.++
T Consensus 209 ~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g 244 (311)
T 3m2p_A 209 VIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFG 244 (311)
T ss_dssp HHHHTTCTTCCEEEEECCSCEECHHHHHHHHHHHTT
T ss_pred HHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhC
Confidence 99999887655578765 678999999999999983
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-28 Score=195.46 Aligned_cols=181 Identities=19% Similarity=0.182 Sum_probs=148.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||..........+...++.|+.++.+++++|++.++++|||+||. .+|+.... ..+++|+++..|.
T Consensus 100 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~-~vy~~~~~--~~~~~E~~~~~p~----- 171 (346)
T 4egb_A 100 QVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTD-EVYGSLGK--TGRFTEETPLAPN----- 171 (346)
T ss_dssp CEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEG-GGGCCCCS--SCCBCTTSCCCCC-----
T ss_pred CEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCch-HHhCCCCc--CCCcCCCCCCCCC-----
Confidence 799999999876445567788999999999999999999999999999997 77876532 4568999888776
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCC--cccCceeHHhHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEH--YWLGAVHVKDVAKA 157 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~~ 157 (232)
+.|+.+|..+|+++..++++.+++++++||+.+||+..... ..+..++..+..+.++. +++ ..++++|++|+|++
T Consensus 172 -~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a 249 (346)
T 4egb_A 172 -SPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSA 249 (346)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHH
T ss_pred -ChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHH
Confidence 59999999999999999888899999999999999987654 46777888888888766 444 67899999999999
Q ss_pred HHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 158 QVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 158 ~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
++.++.++..++.|+++ ++.+++.|+++.+++.+
T Consensus 250 ~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~ 284 (346)
T 4egb_A 250 IDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLL 284 (346)
T ss_dssp HHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHh
Confidence 99999887754578776 56699999999999987
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-27 Score=189.80 Aligned_cols=179 Identities=17% Similarity=0.126 Sum_probs=149.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+..........+...+++|+.++.+++++|.+.+++++||+||. .+|+... ..+++|+.+..+.
T Consensus 65 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~-~vyg~~~---~~~~~E~~~~~~~----- 135 (313)
T 3ehe_A 65 EEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTS-TVYGEAK---VIPTPEDYPTHPI----- 135 (313)
T ss_dssp SEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCG-GGGCSCS---SSSBCTTSCCCCC-----
T ss_pred CEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCch-HHhCcCC---CCCCCCCCCCCCC-----
Confidence 789999997665555677899999999999999999999999999999997 7788655 4568898877665
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCC-CCc-cCC--cccCceeHHhHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGS-KDT-QEH--YWLGAVHVKDVAK 156 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~-~~~--~~~~~i~v~D~a~ 156 (232)
+.|+.+|..+|.+++.++++.+++++++||+.+||+.... ..+..++.++..+. ++. +++ +.++++|++|+|+
T Consensus 136 -~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ 212 (313)
T 3ehe_A 136 -SLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTH--GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVD 212 (313)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC--SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc--ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHH
Confidence 5999999999999999998889999999999999998654 46667777777763 332 444 7789999999999
Q ss_pred HHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 157 AQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+++.++......+.|+++ ++++++.|+++.+++.+
T Consensus 213 a~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 248 (313)
T 3ehe_A 213 AMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEEL 248 (313)
T ss_dssp HHHHHTTCCSSEEEEECCCSCCEEHHHHHHHHHHHT
T ss_pred HHHHHhccCCCCceEEECCCCCeeHHHHHHHHHHHh
Confidence 999999844444478765 67899999999999998
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=193.97 Aligned_cols=181 Identities=16% Similarity=0.106 Sum_probs=150.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.........++...++.|+.++.+++++|.+.++++|||+||. .+|+... ..+++|+++..|.
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~-~vyg~~~---~~~~~E~~~~~p~----- 172 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASS-STYGDHP---ALPKVEENIGNPL----- 172 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG-GGGTTCC---CSSBCTTCCCCCC-----
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecH-HhcCCCC---CCCCccCCCCCCC-----
Confidence 799999998654222345677899999999999999999999999999997 6787655 4568999987776
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC---ChhHHHHHHHHhCCCCc-cC--CcccCceeHHhH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV---NASGAVLQRLLQGSKDT-QE--HYWLGAVHVKDV 154 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~ 154 (232)
+.|+.+|..+|++++.++++.+++++++||+.+||+...... ..+..++..+..+.++. ++ +..++++|++|+
T Consensus 173 -~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv 251 (351)
T 3ruf_A 173 -SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNV 251 (351)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred -ChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHH
Confidence 599999999999999998888999999999999999865431 35677788888888776 44 477899999999
Q ss_pred HHHHHHhhcC-CCCCc-eEEEe-cCcccHHHHHHHHHhhC
Q 026820 155 AKAQVLLFET-SAASG-RYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 155 a~~~~~~~~~-~~~~~-~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
|++++.++.. +...+ .|+++ ++.+|+.|+++.+++.+
T Consensus 252 a~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 291 (351)
T 3ruf_A 252 IQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDEL 291 (351)
T ss_dssp HHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHh
Confidence 9999999877 33334 68775 67899999999999887
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-27 Score=189.08 Aligned_cols=182 Identities=20% Similarity=0.161 Sum_probs=145.6
Q ss_pred CeEEEeecCCCC-CCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCC----CCCcc
Q 026820 1 MGVFHLASPNTL-DDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETS----WTDLD 75 (232)
Q Consensus 1 D~Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~----~~~~~ 75 (232)
|+|||+|+.... .....++.+.++.|+.++.+|+++|++.++++|||+||. .+|+... ..+++|++ +..|.
T Consensus 63 d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~-~vyg~~~---~~~~~E~~~~~~~~~p~ 138 (319)
T 4b8w_A 63 THVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLST-CIFPDKT---TYPIDETMIHNGPPHNS 138 (319)
T ss_dssp SEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCG-GGSCSSC---CSSBCGGGGGBSCCCSS
T ss_pred CEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcch-hhcCCCC---CCCccccccccCCCCCC
Confidence 799999998652 123456788999999999999999999999999999997 7787654 45688887 33332
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC---CChhHHHHHH----HHhCCCCc-cCC--cc
Q 026820 76 FCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY---VNASGAVLQR----LLQGSKDT-QEH--YW 145 (232)
Q Consensus 76 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~---~~~~~~~~~~----~~~~~~~~-~~~--~~ 145 (232)
..+|+.+|..+|++++.++++.+++++++||+.+|||..... ...+..++.+ +..+.++. +++ ..
T Consensus 139 -----~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 213 (319)
T 4b8w_A 139 -----NFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPR 213 (319)
T ss_dssp -----SHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCE
T ss_pred -----cchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCee
Confidence 136999999999999999888899999999999999986542 2345555665 67777765 444 67
Q ss_pred cCceeHHhHHHHHHHhhcCCCC-Cc-eEEEe-cCcccHHHHHHHHHhhC
Q 026820 146 LGAVHVKDVAKAQVLLFETSAA-SG-RYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~~~-~~-~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
++|+|++|+|++++.++.++.. .+ .|+++ ++.+|+.|+++.+++.+
T Consensus 214 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 262 (319)
T 4b8w_A 214 RQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAM 262 (319)
T ss_dssp ECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHT
T ss_pred EEEEeHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHh
Confidence 8999999999999999987443 33 67664 68899999999999998
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-27 Score=187.70 Aligned_cols=179 Identities=20% Similarity=0.161 Sum_probs=147.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+..........+...++.|+.++.+++++|++.+++++||+||. .+|+... ..+++|+.+..|.
T Consensus 64 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~-~vyg~~~---~~~~~e~~~~~p~----- 134 (312)
T 3ko8_A 64 DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSS-TVYGDAD---VIPTPEEEPYKPI----- 134 (312)
T ss_dssp SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEG-GGGCSCS---SSSBCTTSCCCCC-----
T ss_pred CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcH-HHhCCCC---CCCCCCCCCCCCC-----
Confidence 799999997655445566788999999999999999999999999999997 7788655 4568998877666
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCC-Cc-cCC--cccCceeHHhHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSK-DT-QEH--YWLGAVHVKDVAK 156 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~-~~-~~~--~~~~~i~v~D~a~ 156 (232)
+.|+.+|..+|++++.++++.+++++++||+.+||+.... ..+..++.++..+.. +. +++ ..++++|++|+|+
T Consensus 135 -~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ 211 (312)
T 3ko8_A 135 -SVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH--GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVE 211 (312)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS--SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHH
T ss_pred -ChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC--ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHH
Confidence 5999999999999999988889999999999999998654 456677777777643 32 444 7789999999999
Q ss_pred HHHHhhcC---CCCCc-eEEEe-cCcccHHHHHHHHHhhC
Q 026820 157 AQVLLFET---SAASG-RYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 157 ~~~~~~~~---~~~~~-~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+++.++.+ +...+ .|+++ ++.+++.|+++.+++.+
T Consensus 212 a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 251 (312)
T 3ko8_A 212 ATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVL 251 (312)
T ss_dssp HHHHHHHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHh
Confidence 99999987 33334 68775 57799999999999987
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.95 E-value=9.6e-27 Score=186.46 Aligned_cols=177 Identities=17% Similarity=0.097 Sum_probs=148.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+..........+...++ |+.++.+++++|.+.++++|||+||. .+|+... ..+++|+++..|.
T Consensus 71 d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~-~v~~~~~---~~~~~E~~~~~p~----- 140 (321)
T 3vps_A 71 RLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTC-EVYGQAD---TLPTPEDSPLSPR----- 140 (321)
T ss_dssp EEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEG-GGGCSCS---SSSBCTTSCCCCC-----
T ss_pred CEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCH-HHhCCCC---CCCCCCCCCCCCC-----
Confidence 789999998764222344566777 99999999999999999999999997 6787764 5568999887776
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCC-cEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cC--CcccCceeHHhHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGT-DVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QE--HYWLGAVHVKDVAK 156 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~-~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~ 156 (232)
+.|+.+|..+|+++..++++.++ +++++||+.+||+..... ..+..++..+..+.++. .+ +..++++|++|+|+
T Consensus 141 -~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~ 218 (321)
T 3vps_A 141 -SPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPD-ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVD 218 (321)
T ss_dssp -SHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHH
T ss_pred -ChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCC-ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHH
Confidence 59999999999999999888899 999999999999987653 46677788888887765 44 47789999999999
Q ss_pred HHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 157 AQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+++.++.++.. |.|+++ ++.+++.|+++.++ .+
T Consensus 219 ~~~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~-~~ 252 (321)
T 3vps_A 219 KLVALANRPLP-SVVNFGSGQSLSVNDVIRILQ-AT 252 (321)
T ss_dssp HHHHGGGSCCC-SEEEESCSCCEEHHHHHHHHH-TT
T ss_pred HHHHHHhcCCC-CeEEecCCCcccHHHHHHHHH-Hh
Confidence 99999988766 488775 67799999999999 77
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-26 Score=185.31 Aligned_cols=180 Identities=21% Similarity=0.206 Sum_probs=145.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.........++..++++|+.++.+++++|.+.++++||++||. .+|+... +.+++|+++..+.
T Consensus 78 d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~-~vyg~~~---~~~~~E~~~~~~~----- 148 (337)
T 1r6d_A 78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTN-QVYGSID---SGSWTESSPLEPN----- 148 (337)
T ss_dssp CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEG-GGGCCCS---SSCBCTTSCCCCC-----
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecch-HHhCCCC---CCCCCCCCCCCCC-----
Confidence 799999998643111234678899999999999999999999999999997 6677654 3458888876665
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCC--cccCceeHHhHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEH--YWLGAVHVKDVAKA 157 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~~ 157 (232)
+.|+.+|..+|.+++.++++.+++++++||+.+||+..... ..+..++..+..+.++. +++ ..++++|++|+|++
T Consensus 149 -~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a 226 (337)
T 1r6d_A 149 -SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRG 226 (337)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHH
T ss_pred -CchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC-ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHH
Confidence 59999999999999998888899999999999999986542 45566777777777654 343 67899999999999
Q ss_pred HHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 158 QVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 158 ~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
++.++..+..++.|+++ ++.+|+.|+++.+++.+
T Consensus 227 ~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~ 261 (337)
T 1r6d_A 227 IALVLAGGRAGEIYHIGGGLELTNRELTGILLDSL 261 (337)
T ss_dssp HHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHh
Confidence 99999766544478776 56799999999999887
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=5.8e-26 Score=179.40 Aligned_cols=172 Identities=18% Similarity=0.146 Sum_probs=143.8
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.........++...++.|+.++.+++++|++.++ ++||+||. .+|+... +.+++|+++..|.
T Consensus 58 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~-~vy~~~~---~~~~~E~~~~~p~----- 127 (287)
T 3sc6_A 58 HIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTD-YVFQGDR---PEGYDEFHNPAPI----- 127 (287)
T ss_dssp SEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEG-GGSCCCC---SSCBCTTSCCCCC-----
T ss_pred CEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchh-hhcCCCC---CCCCCCCCCCCCC-----
Confidence 799999999765333356889999999999999999999987 79999997 6677654 4569999987776
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~ 159 (232)
+.|+.+|..+|++++.+ +.+++++||+.+||+... ..+..++..+..+.++. .+++.++++|++|+|++++
T Consensus 128 -~~Y~~sK~~~E~~~~~~----~~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 199 (287)
T 3sc6_A 128 -NIYGASKYAGEQFVKEL----HNKYFIVRTSWLYGKYGN---NFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMIN 199 (287)
T ss_dssp -SHHHHHHHHHHHHHHHH----CSSEEEEEECSEECSSSC---CHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHh----CCCcEEEeeeeecCCCCC---cHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHH
Confidence 59999999999998876 447899999999998743 35666677777777666 6778889999999999999
Q ss_pred HhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 160 LLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 160 ~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
.++.++. .+.|+++ ++.+++.|+++.+++.+
T Consensus 200 ~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~ 231 (287)
T 3sc6_A 200 KLIHTSL-YGTYHVSNTGSCSWFEFAKKIFSYA 231 (287)
T ss_dssp HHHTSCC-CEEEECCCBSCEEHHHHHHHHHHHH
T ss_pred HHHhCCC-CCeEEEcCCCcccHHHHHHHHHHHc
Confidence 9998876 6678765 57799999999999988
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-26 Score=189.65 Aligned_cols=185 Identities=18% Similarity=0.218 Sum_probs=147.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccc-cc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC-KS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~-~~ 79 (232)
|+|||+||.........++.+.++.|+.++.+++++|++.+ ++|||+||. .+|+... ..+++|++++....+ ..
T Consensus 93 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~-~vyg~~~---~~~~~e~~~~~~~~p~~~ 167 (372)
T 3slg_A 93 DVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTS-EVYGMCA---DEQFDPDASALTYGPINK 167 (372)
T ss_dssp SEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCG-GGGBSCC---CSSBCTTTCCEEECCTTC
T ss_pred CEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcH-HHhCCCC---CCCCCccccccccCCCCC
Confidence 79999999876422223567888999999999999999999 899999996 7788765 445788876532211 12
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCC-------CCChhHHHHHHHHhCCCCc-cC--CcccCce
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP-------YVNASGAVLQRLLQGSKDT-QE--HYWLGAV 149 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~-------~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i 149 (232)
+.+.|+.+|..+|+++..++++ +++++|+||+.+||++..+ ....+..++..+..+.++. .+ +..++++
T Consensus 168 p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 246 (372)
T 3slg_A 168 PRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFT 246 (372)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECE
T ss_pred CCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEE
Confidence 3468999999999999998877 9999999999999998653 1235667788888888766 43 4778999
Q ss_pred eHHhHHHHHHHhhcCCC--CCc-eEEEec--CcccHHHHHHHHHhhC
Q 026820 150 HVKDVAKAQVLLFETSA--ASG-RYLCTN--GIYQFAEFAEKVSKLF 191 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~--~~~s~~el~~~i~~~~ 191 (232)
|++|+|++++.++.++. ..+ .|++++ +.+|+.|+++.+++.+
T Consensus 247 ~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~ 293 (372)
T 3slg_A 247 YVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELA 293 (372)
T ss_dssp EHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHh
Confidence 99999999999998874 334 787765 5899999999999887
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-26 Score=183.20 Aligned_cols=180 Identities=23% Similarity=0.223 Sum_probs=143.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccC-CCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPN-PNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~-~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+|+.........++...+++|+.++.+++++|.+.+++++|++||.+.+|+. .. ..+++|+++..+.
T Consensus 68 d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~---~~~~~E~~~~~~~---- 140 (311)
T 2p5y_A 68 THVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPE---GERAEETWPPRPK---- 140 (311)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCT---TCCBCTTSCCCCC----
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCC---CCCcCCCCCCCCC----
Confidence 789999997543111234677899999999999999999998999999997567875 32 3457888776655
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC--ChhHHHHHHHHhCCCCc-c-----CC--cccCce
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV--NASGAVLQRLLQGSKDT-Q-----EH--YWLGAV 149 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~-~-----~~--~~~~~i 149 (232)
+.|+.+|..+|.+++.++++.+++++++||+.+|||...... ..+..++.++..+.++. + ++ ..++|+
T Consensus 141 --~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 218 (311)
T 2p5y_A 141 --SPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYV 218 (311)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEE
T ss_pred --ChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeE
Confidence 599999999999999988888999999999999999865431 23455667777776644 4 44 567999
Q ss_pred eHHhHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 150 HVKDVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
|++|+|++++.++..+ .+.|+++ ++.+|+.|+++.+++.+
T Consensus 219 ~v~Dva~a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~ 259 (311)
T 2p5y_A 219 YVGDVAEAHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAA 259 (311)
T ss_dssp EHHHHHHHHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHh
Confidence 9999999999998764 4578775 67799999999999987
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-25 Score=180.56 Aligned_cols=181 Identities=13% Similarity=0.077 Sum_probs=144.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCC-CEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGV-RRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+||.........++...++.|+.++.+++++|.+.++ ++||++||. .+|+... ..+++|+++..|.
T Consensus 88 d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~-~v~g~~~---~~~~~E~~~~~p~---- 159 (335)
T 1rpn_A 88 QEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTS-EMFGLIQ---AERQDENTPFYPR---- 159 (335)
T ss_dssp SEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEG-GGGCSCS---SSSBCTTSCCCCC----
T ss_pred CEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCH-HHhCCCC---CCCCCcccCCCCC----
Confidence 799999998653222345788999999999999999999886 899999997 6787654 4468898877765
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC--ChhHHHHHHHHhCCCCc--cC--CcccCceeHHh
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV--NASGAVLQRLLQGSKDT--QE--HYWLGAVHVKD 153 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~--~~--~~~~~~i~v~D 153 (232)
+.|+.+|..+|.++..++++.+++++++||+.+|||+..... ..+..++..+..+.... ++ +..++|+|++|
T Consensus 160 --~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~D 237 (335)
T 1rpn_A 160 --SPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGD 237 (335)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHH
T ss_pred --ChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHH
Confidence 599999999999999988888999999999999999765422 12445566666676432 34 46789999999
Q ss_pred HHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 154 VAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 154 ~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
+|++++.++.++. .+.|+++ ++.+|+.|+++.+++.++
T Consensus 238 va~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g 276 (335)
T 1rpn_A 238 YVEAMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVG 276 (335)
T ss_dssp HHHHHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhC
Confidence 9999999998764 3678665 677999999999999883
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=181.39 Aligned_cols=180 Identities=18% Similarity=0.154 Sum_probs=143.8
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCC-CEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGV-RRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+||.........++..++++|+.++.+++++|.+.+. ++||++||. .+|+... +.+++|+++..+.
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~-~vyg~~~---~~~~~E~~~~~~~---- 148 (336)
T 2hun_A 77 DGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTD-EVYGDIL---KGSFTENDRLMPS---- 148 (336)
T ss_dssp SEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEG-GGGCCCS---SSCBCTTBCCCCC----
T ss_pred CEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccH-HHHCCCC---CCCcCCCCCCCCC----
Confidence 799999998642111234678899999999999999998864 699999997 6687654 3458888776655
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCC--cccCceeHHhHHH
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEH--YWLGAVHVKDVAK 156 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~ 156 (232)
+.|+.+|..+|.+++.++.+.+++++++||+.+||+..... ..+..++..+..+.++. +++ ..++++|++|+|+
T Consensus 149 --~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 225 (336)
T 2hun_A 149 --SPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVR 225 (336)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHH
T ss_pred --CccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHH
Confidence 59999999999999999888899999999999999986542 35566777777777655 344 6789999999999
Q ss_pred HHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 157 AQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+++.++.....++.|+++ +..+++.|+++.+++.+
T Consensus 226 ~~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~ 261 (336)
T 2hun_A 226 AIELVLLKGESREIYNISAGEEKTNLEVVKIILRLM 261 (336)
T ss_dssp HHHHHHHHCCTTCEEEECCSCEECHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHh
Confidence 999999765444478776 46799999999999988
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-25 Score=180.07 Aligned_cols=183 Identities=17% Similarity=0.134 Sum_probs=144.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc-CCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+||.........++...+++|+.++.+++++|.+. +++++|++||. .+|+... +...+++|+++..+.
T Consensus 76 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~-~v~g~~~-~~~~~~~E~~~~~~~---- 149 (321)
T 2pk3_A 76 DYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSS-EEYGMIL-PEESPVSEENQLRPM---- 149 (321)
T ss_dssp SEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEG-GGTBSCC-GGGCSBCTTSCCBCC----
T ss_pred CEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccH-HhcCCCC-CCCCCCCCCCCCCCC----
Confidence 7999999986532223457889999999999999999876 68899999998 6677541 014468898877665
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHh---C--CCCc-cC--CcccCceeH
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQ---G--SKDT-QE--HYWLGAVHV 151 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~---~--~~~~-~~--~~~~~~i~v 151 (232)
+.|+.+|..+|.+++.++++.+++++++||+.+||+..... ..+..++..+.. | .++. ++ +..++++|+
T Consensus 150 --~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v 226 (321)
T 2pk3_A 150 --SPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDV 226 (321)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEH
T ss_pred --CccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEH
Confidence 59999999999999998887899999999999999986542 345556666555 6 3433 33 367899999
Q ss_pred HhHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 152 KDVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
+|+|++++.++..+..++.|+++ ++.+++.|+++.+.+.++
T Consensus 227 ~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g 268 (321)
T 2pk3_A 227 RDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMAN 268 (321)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhC
Confidence 99999999999876444478775 567999999999999983
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=9.4e-26 Score=179.90 Aligned_cols=178 Identities=16% Similarity=0.130 Sum_probs=137.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.... ...++.+.++.|+.++.+++++|.+.++ ++|++||. .+|+... ..+++|+++..|.
T Consensus 70 d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~-~v~g~~~---~~~~~E~~~~~p~----- 137 (310)
T 1eq2_A 70 EAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSA-ATYGGRT---SDFIESREYEKPL----- 137 (310)
T ss_dssp CEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEG-GGGTTCC---SCBCSSGGGCCCS-----
T ss_pred cEEEECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeH-HHhCCCC---CCCCCCCCCCCCC-----
Confidence 799999998764 3456788999999999999999999998 99999997 6677654 3457888766655
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC---CChhHHHHHHHHhCCCCc-cCC--c-ccCceeHHh
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY---VNASGAVLQRLLQGSKDT-QEH--Y-WLGAVHVKD 153 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~-~~~--~-~~~~i~v~D 153 (232)
+.|+.+|..+|.++..++++.+++++++||+.+||+..... ...+..++..+..+.++. +++ . .++++|++|
T Consensus 138 -~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~D 216 (310)
T 1eq2_A 138 -NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD 216 (310)
T ss_dssp -SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred -ChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHH
Confidence 59999999999999998877899999999999999976421 135566777777777654 444 6 789999999
Q ss_pred HHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 154 VAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 154 ~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
+|++++.++.++. .+.|+++ ++.+|+.|+++.+++.++
T Consensus 217 va~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g 255 (310)
T 1eq2_A 217 VADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHK 255 (310)
T ss_dssp HHHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC-----
T ss_pred HHHHHHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcC
Confidence 9999999998776 5578775 678999999999998883
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.9e-26 Score=184.46 Aligned_cols=181 Identities=20% Similarity=0.197 Sum_probs=146.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+.... ........++.|+.++.+++++|.+.++++|||+||. .+|+..... ..+++|+++..+.
T Consensus 79 d~vih~A~~~~~--~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~-~vyg~~~~~-~~~~~E~~~~~~~----- 149 (347)
T 4id9_A 79 SAVLHLGAFMSW--APADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSG-EVYPENRPE-FLPVTEDHPLCPN----- 149 (347)
T ss_dssp SEEEECCCCCCS--SGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG-GGTTTTSCS-SSSBCTTSCCCCC-----
T ss_pred CEEEECCcccCc--chhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCH-HHhCCCCCC-CCCcCCCCCCCCC-----
Confidence 799999998764 1223378999999999999999999999999999997 778863221 5678999887766
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCee-------------CCCCCCC----------CChhHHHHHHHHhCC
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSL-------------GPFPQPY----------VNASGAVLQRLLQGS 137 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~-------------G~~~~~~----------~~~~~~~~~~~~~~~ 137 (232)
+.|+.+|..+|++++.++++.+++++++||+.+| |+..... ...+..++..+..+.
T Consensus 150 -~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (347)
T 4id9_A 150 -SPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGE 228 (347)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSS
T ss_pred -ChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCC
Confidence 5999999999999999988889999999999999 7653321 235566677777777
Q ss_pred CCc-c--CCcccCc----eeHHhHHHHHHHhhcCCCC-CceEEEe-cCcccHHHHHHHHHhhC
Q 026820 138 KDT-Q--EHYWLGA----VHVKDVAKAQVLLFETSAA-SGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 138 ~~~-~--~~~~~~~----i~v~D~a~~~~~~~~~~~~-~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
++. + ++..++| +|++|+|++++.++.++.. .+.|+++ ++.+++.|+++.+++.+
T Consensus 229 ~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 291 (347)
T 4id9_A 229 PSHILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALT 291 (347)
T ss_dssp CCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHH
T ss_pred CeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHh
Confidence 654 3 3467788 9999999999999988744 3478775 67799999999999987
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-25 Score=178.84 Aligned_cols=193 Identities=36% Similarity=0.505 Sum_probs=138.5
Q ss_pred CeEEEeecCCCCCCCCCc-hhhhHHHHHHHHHHHHHHHHHc-CCCEEEEecccceeccCCCCCCCCccCCCCCCCcccc-
Q 026820 1 MGVFHLASPNTLDDPKDP-EKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC- 77 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~-~~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~- 77 (232)
|+|||+|+.... ...+ ..+++++|+.++.+++++|.+. ++++||++||.+++|+.... ..+++|+++......
T Consensus 76 d~vih~A~~~~~--~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~--~~~~~e~~~~~~~~~~ 151 (322)
T 2p4h_X 76 VGIFHTASPIDF--AVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKD--KDVLDESDWSDVDLLR 151 (322)
T ss_dssp SEEEECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSC--CSEECTTCCCCHHHHH
T ss_pred CEEEEcCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCC--CeecCCccccchhhhc
Confidence 799999976432 1122 3458999999999999999988 78999999998666654322 345788765433210
Q ss_pred -cccc-hhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHH
Q 026820 78 -KSHK-IWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVA 155 (232)
Q Consensus 78 -~~~~-~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 155 (232)
..+. ..|+.||..+|.++.+++++.+++++++||+.+||+............+.....+....+++..++++|++|+|
T Consensus 152 ~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva 231 (322)
T 2p4h_X 152 SVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVA 231 (322)
T ss_dssp HHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHH
T ss_pred ccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHH
Confidence 0111 26999999999999998877899999999999999976543222222222334555443444334899999999
Q ss_pred HHHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhCCCCCCc
Q 026820 156 KAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~p~~~~~ 197 (232)
++++.++..+...|.|+++++.+|+.|+++.+.+.+|..++|
T Consensus 232 ~a~~~~~~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~ 273 (322)
T 2p4h_X 232 RAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQIL 273 (322)
T ss_dssp HHHHHHHHSCCCCEEEECCCEEEEHHHHHHHHHHHCTTSCCC
T ss_pred HHHHHHhhCcCCCCCEEEcCCCCCHHHHHHHHHHhCCCCCCC
Confidence 999999977655667887777899999999999988655554
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=182.52 Aligned_cols=181 Identities=16% Similarity=0.103 Sum_probs=145.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.........++...+++|+.++.+++++|.+.++++||++||. .+|+... ..+++|+++..+.
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~-~~~~~~~---~~~~~E~~~~~~~----- 174 (352)
T 1sb8_A 104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASS-STYGDHP---GLPKVEDTIGKPL----- 174 (352)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG-GGGTTCC---CSSBCTTCCCCCC-----
T ss_pred CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccH-HhcCCCC---CCCCCCCCCCCCC-----
Confidence 799999998542111234678889999999999999999999999999997 6677654 4468898887665
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC---ChhHHHHHHHHhCCCCc-cC--CcccCceeHHhH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV---NASGAVLQRLLQGSKDT-QE--HYWLGAVHVKDV 154 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~ 154 (232)
+.|+.+|..+|.++..++++.+++++++||+.+||+...... ..+..++..+..+.++. .+ +..++++|++|+
T Consensus 175 -~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv 253 (352)
T 1sb8_A 175 -SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT 253 (352)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred -ChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHH
Confidence 599999999999999988888999999999999999865431 34566777777887765 44 367899999999
Q ss_pred HHHHHHhhcCC-CCCc-eEEEe-cCcccHHHHHHHHHhhC
Q 026820 155 AKAQVLLFETS-AASG-RYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 155 a~~~~~~~~~~-~~~~-~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
|++++.++... ...+ .|+++ ++.+|+.|+++.+++.+
T Consensus 254 a~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 293 (352)
T 1sb8_A 254 VQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGL 293 (352)
T ss_dssp HHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHH
Confidence 99999988763 3334 68775 67899999999999887
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=9.4e-26 Score=180.87 Aligned_cols=186 Identities=16% Similarity=0.172 Sum_probs=141.7
Q ss_pred CeEEEeecCCCC-CCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTL-DDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+|+.... .....++.+.++.|+.++.+++++|.+.++++|||+||. .+|+... ..+++|+++..... .+
T Consensus 57 d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~-~vyg~~~---~~~~~E~~~~~~~~-~p 131 (321)
T 1e6u_A 57 DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS-CIYPKLA---KQPMAESELLQGTL-EP 131 (321)
T ss_dssp SEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCG-GGSCTTC---CSSBCGGGTTSSCC-CG
T ss_pred CEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccH-HHcCCCC---CCCcCccccccCCC-CC
Confidence 799999998642 011234678899999999999999999999999999997 6677644 44578876321100 11
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC---CChhHHHHHHHHh----C-CCCc-c--CCcccCc
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY---VNASGAVLQRLLQ----G-SKDT-Q--EHYWLGA 148 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~---~~~~~~~~~~~~~----~-~~~~-~--~~~~~~~ 148 (232)
..+.|+.+|..+|+++..++++.+++++++||+.+||+..... ...+..++..+.. | .++. + ++..++|
T Consensus 132 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~ 211 (321)
T 1e6u_A 132 TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREF 211 (321)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECE
T ss_pred CCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEe
Confidence 1258999999999999998877899999999999999986532 1355566666554 3 3433 3 4477899
Q ss_pred eeHHhHHHHHHHhhcCCCC---------CceEEEe-cCcccHHHHHHHHHhhC
Q 026820 149 VHVKDVAKAQVLLFETSAA---------SGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~---------~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+|++|+|++++.++.++.. .+.|+++ ++.+|+.|+++.+++.+
T Consensus 212 i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 264 (321)
T 1e6u_A 212 LHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVV 264 (321)
T ss_dssp EEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHH
T ss_pred EEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHh
Confidence 9999999999999987654 2478774 67799999999999987
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.4e-25 Score=179.02 Aligned_cols=185 Identities=21% Similarity=0.197 Sum_probs=136.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.... ...++.+.++.|+.++.+++++|.+.+++++||+||. .+|+..... ..+ +|+++..|.. ..
T Consensus 79 d~vih~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~-~~~~~~~~~-~~~-~E~~~~~p~~--~~ 151 (342)
T 2x4g_A 79 DGVIFSAGYYPS--RPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSA-YAMPRHPQG-LPG-HEGLFYDSLP--SG 151 (342)
T ss_dssp SEEEEC--------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCG-GGSCCCTTS-SCB-CTTCCCSSCC--TT
T ss_pred CEEEECCccCcC--CCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCH-HhhCcCCCC-CCC-CCCCCCCccc--cc
Confidence 799999997652 2345788999999999999999999999999999997 667654321 134 8888776610 01
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCC-CCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFP-QPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~ 159 (232)
.+.|+.+|..+|.++..++++ +++++++||+.+||+.. .. . +..++..+..+.....++..++++|++|+|++++
T Consensus 152 ~~~Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 227 (342)
T 2x4g_A 152 KSSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGP--T-TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLL 227 (342)
T ss_dssp SCHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSC--S-TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccc--c-HHHHHHHHHcCCCccccCCCcceeeHHHHHHHHH
Confidence 269999999999999998876 99999999999999976 32 2 4455666666665445667889999999999999
Q ss_pred HhhcCCCCCceEEEecCcccHHHHHHHHHhhCCCCCCc
Q 026820 160 LLFETSAASGRYLCTNGIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~p~~~~~ 197 (232)
.++.++..++.|++++..+|+.|+++.+++.+ +.+.+
T Consensus 228 ~~~~~~~~g~~~~v~~~~~s~~e~~~~i~~~~-g~~~~ 264 (342)
T 2x4g_A 228 MALERGRIGERYLLTGHNLEMADLTRRIAELL-GQPAP 264 (342)
T ss_dssp HHHHHSCTTCEEEECCEEEEHHHHHHHHHHHH-TCCCC
T ss_pred HHHhCCCCCceEEEcCCcccHHHHHHHHHHHh-CCCCC
Confidence 99987665447877543399999999999998 44443
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=183.04 Aligned_cols=182 Identities=21% Similarity=0.150 Sum_probs=142.7
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CCEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+||..........+...+++|+.++.+++++|.+.+ ++++|++||. .+|+.... ..+++|+++..+.
T Consensus 82 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~-~vyg~~~~--~~~~~E~~~~~~~---- 154 (357)
T 1rkx_A 82 EIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSD-KCYDNKEW--IWGYRENEAMGGY---- 154 (357)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCG-GGBCCCCS--SSCBCTTSCBCCS----
T ss_pred CEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCH-HHhCCCCc--CCCCCCCCCCCCC----
Confidence 79999999643211123467889999999999999999886 8899999997 66776442 2357887765554
Q ss_pred cchhHHHHHHHHHHHHHHHHHHc---------CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCcc--CCcccCc
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKN---------GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQ--EHYWLGA 148 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~---------~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 148 (232)
+.|+.+|..+|++++.++.+. +++++++||+.+||++.......+..++..+..+.++.. ++..++|
T Consensus 155 --~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 232 (357)
T 1rkx_A 155 --DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW 232 (357)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred --CccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeecc
Confidence 599999999999999987654 899999999999999865433466777888778877653 3467899
Q ss_pred eeHHhHHHHHHHhhcC---C--CCCceEEEec---CcccHHHHHHHHHhhC
Q 026820 149 VHVKDVAKAQVLLFET---S--AASGRYLCTN---GIYQFAEFAEKVSKLF 191 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~---~--~~~~~~~~~~---~~~s~~el~~~i~~~~ 191 (232)
+|++|+|++++.++.+ . ...+.|++++ +.+|+.|+++.+++.+
T Consensus 233 v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~ 283 (357)
T 1rkx_A 233 QHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYW 283 (357)
T ss_dssp EETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHH
T ss_pred EeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHh
Confidence 9999999999998864 1 2345787763 5799999999999887
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=179.98 Aligned_cols=181 Identities=18% Similarity=0.159 Sum_probs=140.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||..........+.+.++.|+.++.+++++|++.+++++|++||. .+|+... ..+++|+.+..+.
T Consensus 80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~-~~~g~~~---~~~~~e~~~~~~~----- 150 (341)
T 3enk_A 80 TAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSA-TVYGVPE---RSPIDETFPLSAT----- 150 (341)
T ss_dssp CEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG-GGBCSCS---SSSBCTTSCCBCS-----
T ss_pred cEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecc-eEecCCC---CCCCCCCCCCCCC-----
Confidence 799999998654222334568889999999999999999998999999997 6787655 5568999887765
Q ss_pred chhHHHHHHHHHHHHHHHHHHcC-CcEEEEcCCCeeCCCCCC------C--CChhHHHHHHHHhCCC--Cc-c-------
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNG-TDVVAIHPATSLGPFPQP------Y--VNASGAVLQRLLQGSK--DT-Q------- 141 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~-~~~~ilR~~~i~G~~~~~------~--~~~~~~~~~~~~~~~~--~~-~------- 141 (232)
+.|+.+|..+|++++.++.+.+ ++++++||+++||+.... . ...+..++.+...+.. +. +
T Consensus 151 -~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 229 (341)
T 3enk_A 151 -NPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTP 229 (341)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSST
T ss_pred -ChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCC
Confidence 5999999999999999887775 999999999999986421 0 1223334444444432 21 2
Q ss_pred -CCcccCceeHHhHHHHHHHhhcCC---CCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 142 -EHYWLGAVHVKDVAKAQVLLFETS---AASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 142 -~~~~~~~i~v~D~a~~~~~~~~~~---~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+++.++|+|++|+|++++.++.+. ...+.|+++ ++.+|+.|+++.+++.+
T Consensus 230 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 284 (341)
T 3enk_A 230 DGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKAS 284 (341)
T ss_dssp TSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred CCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHh
Confidence 346789999999999999999762 333478775 67899999999999987
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-25 Score=179.59 Aligned_cols=181 Identities=18% Similarity=0.179 Sum_probs=138.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.........++...++.|+.++.+++++|.+.+++++|++||. .+|+... ..+++|+++..+.
T Consensus 69 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~-~~~~~~~---~~~~~E~~~~~~~----- 139 (330)
T 2c20_A 69 EAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTA-ATYGEVD---VDLITEETMTNPT----- 139 (330)
T ss_dssp EEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCG-GGGCSCS---SSSBCTTSCCCCS-----
T ss_pred CEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCc-eeeCCCC---CCCCCcCCCCCCC-----
Confidence 789999998643111234678899999999999999999999999999997 6787654 4568999877665
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCC--------CCChhHHHHHHHHhCCC-Cc-c--------C
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP--------YVNASGAVLQRLLQGSK-DT-Q--------E 142 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~--------~~~~~~~~~~~~~~~~~-~~-~--------~ 142 (232)
+.|+.+|..+|+++..++++.+++++++||+.+||+...+ ....+..++.....+.+ +. + +
T Consensus 140 -~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 218 (330)
T 2c20_A 140 -NTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDG 218 (330)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSS
T ss_pred -ChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCC
Confidence 5999999999999999888889999999999999996321 11233333333332222 21 2 3
Q ss_pred CcccCceeHHhHHHHHHHhhcCCCC---CceEEEe-cCcccHHHHHHHHHhhC
Q 026820 143 HYWLGAVHVKDVAKAQVLLFETSAA---SGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~~~~---~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+..++++|++|+|++++.+++++.. .+.|+++ ++.+|+.|+++.+++.+
T Consensus 219 ~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 271 (330)
T 2c20_A 219 TCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVT 271 (330)
T ss_dssp SCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHT
T ss_pred ceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHh
Confidence 3678999999999999999876432 3478775 67899999999999988
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.2e-26 Score=181.17 Aligned_cols=183 Identities=14% Similarity=0.143 Sum_probs=141.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.... ....++...++.|+.++.+++++|.+.+++++||+||. .+|+.... ..+.+|+.+..|.
T Consensus 70 d~vih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~-~~~~~~~~--~~~~~e~~~~~~~----- 140 (312)
T 2yy7_A 70 TDIYLMAALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSI-AVFGPTTP--KENTPQYTIMEPS----- 140 (312)
T ss_dssp CEEEECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEG-GGCCTTSC--SSSBCSSCBCCCC-----
T ss_pred CEEEECCccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccH-HHhCCCCC--CCCccccCcCCCC-----
Confidence 799999998542 11234678899999999999999999999999999997 66765332 2457787766555
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC---ChhHHHHHHHHhCCCCc-c--CCcccCceeHHhH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV---NASGAVLQRLLQGSKDT-Q--EHYWLGAVHVKDV 154 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~ 154 (232)
+.|+.+|..+|.+++.++++.+++++++||+.+||+...+.. ......+.+...++... + ++..++++|++|+
T Consensus 141 -~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 219 (312)
T 2yy7_A 141 -TVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDA 219 (312)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHH
T ss_pred -chhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHH
Confidence 599999999999999988888999999999999997654321 22333344444444433 3 3477899999999
Q ss_pred HHHHHHhhcCCCC---C-ceEEEecCcccHHHHHHHHHhhCCC
Q 026820 155 AKAQVLLFETSAA---S-GRYLCTNGIYQFAEFAEKVSKLFPE 193 (232)
Q Consensus 155 a~~~~~~~~~~~~---~-~~~~~~~~~~s~~el~~~i~~~~p~ 193 (232)
|++++.+++++.. . +.|+++++.+|+.|+++.+++.++.
T Consensus 220 a~a~~~~~~~~~~~~~~~~~~ni~~~~~s~~e~~~~i~~~~~~ 262 (312)
T 2yy7_A 220 IDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPE 262 (312)
T ss_dssp HHHHHHHHHSCGGGCCCSSCEECCSEEECHHHHHHHHHTTCTT
T ss_pred HHHHHHHHhCcccccccCceEEeCCCccCHHHHHHHHHHHCCC
Confidence 9999999987653 2 4788877789999999999999863
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.9e-25 Score=177.02 Aligned_cols=194 Identities=34% Similarity=0.591 Sum_probs=138.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CCEEEEecccceeccCCCCCCCCccCCCCCCCccc--c
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF--C 77 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~--~ 77 (232)
|+|||+|+.... ....+..+.+++|+.++.+++++|.+.+ ++++|++||.+++|+.... ..+++|+.+..... +
T Consensus 79 d~Vih~A~~~~~-~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~--~~~~~E~~~~~~~~~~~ 155 (337)
T 2c29_D 79 TGVFHVATPMDF-ESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQ--LPVYDESCWSDMEFCRA 155 (337)
T ss_dssp SEEEECCCCCCS-SCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSC--CSEECTTCCCCHHHHHH
T ss_pred CEEEEeccccCC-CCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCC--CcccCcccCCchhhhcc
Confidence 799999997632 1122234688999999999999999886 8999999998667765321 33577876543221 0
Q ss_pred -cccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCC-cccCceeHHhHH
Q 026820 78 -KSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEH-YWLGAVHVKDVA 155 (232)
Q Consensus 78 -~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a 155 (232)
..+.+.|+.+|..+|.++..+.+..+++++++||+.+|||..................+....++. ....|+|++|+|
T Consensus 156 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva 235 (337)
T 2c29_D 156 KKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLC 235 (337)
T ss_dssp HCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHH
T ss_pred cCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHH
Confidence 112357999999999999988777799999999999999976543222111111123443322222 223599999999
Q ss_pred HHHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhCCCCCCc
Q 026820 156 KAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~p~~~~~ 197 (232)
++++.+++++...++|++++..+++.|+++.+++.+|...+|
T Consensus 236 ~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~ 277 (337)
T 2c29_D 236 NAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIP 277 (337)
T ss_dssp HHHHHHHHCTTCCEEEEECCEEEEHHHHHHHHHHHCTTSCCC
T ss_pred HHHHHHhcCcccCceEEEeCCCCCHHHHHHHHHHHCCCccCC
Confidence 999999987665667888777799999999999988654444
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.6e-25 Score=182.17 Aligned_cols=185 Identities=19% Similarity=0.155 Sum_probs=140.5
Q ss_pred CeEEEeecCCCCCCCCCchh---hhHHHHHHHHHHHHHHHHHcCC-CEEEEecccceeccCCCCCCCCccCCCCCCCc--
Q 026820 1 MGVFHLASPNTLDDPKDPEK---ELLIPAVQGTLNVLEAAKKFGV-RRVVLTSSISSIVPNPNWPQGKVIDETSWTDL-- 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~---~~~~~nv~~~~~l~~~~~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~-- 74 (232)
|+|||+||.........++. ..+++|+.++.+++++|.+.++ +++|++||. .+|+... .+++|+.+...
T Consensus 102 D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~-~vyg~~~----~~~~E~~~~~~~~ 176 (404)
T 1i24_A 102 DSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTM-GEYGTPN----IDIEEGYITITHN 176 (404)
T ss_dssp SEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCG-GGGCCCS----SCBCSSEEEEEET
T ss_pred CEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcH-HHhCCCC----CCCCccccccccc
Confidence 79999999865311112232 4779999999999999999887 599999997 6787543 23666521100
Q ss_pred ------ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC----------------CChhHHHHHH
Q 026820 75 ------DFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY----------------VNASGAVLQR 132 (232)
Q Consensus 75 ------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~----------------~~~~~~~~~~ 132 (232)
..+..+.+.|+.+|..+|+++..++++.+++++++||+.+|||+.... ...+..++..
T Consensus 177 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (404)
T 1i24_A 177 GRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQ 256 (404)
T ss_dssp TEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHH
T ss_pred cccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHH
Confidence 001222368999999999999998877899999999999999976421 2356778888
Q ss_pred HHhCCCCc-cCC--cccCceeHHhHHHHHHHhhcCCCCCc---eEEEecCcccHHHHHHHHHhh
Q 026820 133 LLQGSKDT-QEH--YWLGAVHVKDVAKAQVLLFETSAASG---RYLCTNGIYQFAEFAEKVSKL 190 (232)
Q Consensus 133 ~~~~~~~~-~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~---~~~~~~~~~s~~el~~~i~~~ 190 (232)
+..+.++. +++ +.++|+|++|+|++++.++.++...| .|+++++.+|+.|+++.+++.
T Consensus 257 ~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~ 320 (404)
T 1i24_A 257 AAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKA 320 (404)
T ss_dssp HHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHH
T ss_pred HHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHH
Confidence 88888764 444 67899999999999999998765444 688877779999999999987
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-25 Score=179.67 Aligned_cols=183 Identities=16% Similarity=0.190 Sum_probs=144.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCC---------CCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNW---------PQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~---------~~~~~~~E~~~ 71 (232)
|+|||+||.........++...+++|+.++.+++++|.+.++ +|||+||. .+|+.... ....+++|+++
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~-~vyg~~~~~~~~~~~~~~~~~~~~E~~~ 154 (348)
T 1oc2_A 77 DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTD-EVYGDLPLREDLPGHGEGPGEKFTAETN 154 (348)
T ss_dssp SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEG-GGGCCBCCGGGSTTTTCSTTSSBCTTSC
T ss_pred CEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEeccc-ceeCCCcccccccccccccCCCcCCCCC
Confidence 799999998643111234578899999999999999999887 99999997 66765321 01145888877
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cC--CcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QE--HYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~ 148 (232)
..+. +.|+.+|..+|.+++.++++.+++++++||+.+||+..... ..+..++..+..+.++. ++ +..+++
T Consensus 155 ~~~~------~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (348)
T 1oc2_A 155 YNPS------SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDW 227 (348)
T ss_dssp CCCC------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEEC
T ss_pred CCCC------CccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCceEecCCCceEee
Confidence 6655 59999999999999998888899999999999999986542 45566777777777655 33 367899
Q ss_pred eeHHhHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 149 VHVKDVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
+|++|+|++++.++..+..+..|+++ +..+++.|+++.+.+.++
T Consensus 228 i~v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g 272 (348)
T 1oc2_A 228 IHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMG 272 (348)
T ss_dssp EEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTT
T ss_pred EEHHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhC
Confidence 99999999999999766444478775 567999999999999883
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-25 Score=179.46 Aligned_cols=186 Identities=18% Similarity=0.215 Sum_probs=143.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccc-cc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC-KS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~-~~ 79 (232)
|+|||+||.........++.+.+++|+.++.+++++|.+.+ +++||+||. .+|+... ..+++|+++..+..+ ..
T Consensus 69 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~-~v~g~~~---~~~~~e~~~~~~~~~~~~ 143 (345)
T 2bll_A 69 DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTS-EVYGMCS---DKYFDEDHSNLIVGPVNK 143 (345)
T ss_dssp SEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCG-GGGBTCC---CSSBCTTTCCCBCCCTTC
T ss_pred CEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecH-HHcCCCC---CCCcCCcccccccCcccC
Confidence 79999999865311123467788999999999999999988 899999997 6787654 445788876432111 12
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC-------CChhHHHHHHHHhCCCCc-cC--CcccCce
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY-------VNASGAVLQRLLQGSKDT-QE--HYWLGAV 149 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~~-~~--~~~~~~i 149 (232)
+.+.|+.+|..+|++++.++++.+++++++||+.+||+..... ...+..++..+..+.++. ++ ++.++++
T Consensus 144 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 223 (345)
T 2bll_A 144 PRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFT 223 (345)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECE
T ss_pred cccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEE
Confidence 3468999999999999998888899999999999999986421 124566777778887764 33 4678999
Q ss_pred eHHhHHHHHHHhhcCCC--CCc-eEEEec-C-cccHHHHHHHHHhhC
Q 026820 150 HVKDVAKAQVLLFETSA--ASG-RYLCTN-G-IYQFAEFAEKVSKLF 191 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~-~-~~s~~el~~~i~~~~ 191 (232)
|++|+|++++.++.++. ..+ .|++++ + .+|+.|+++.+++.+
T Consensus 224 ~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~ 270 (345)
T 2bll_A 224 DIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASF 270 (345)
T ss_dssp EHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHh
Confidence 99999999999998754 344 687765 4 699999999999876
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-25 Score=179.08 Aligned_cols=178 Identities=15% Similarity=0.125 Sum_probs=146.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.... ...++.+.+++|+.++.+++++|.+.++ +||++||. .+|+... ..+++|+++..+.
T Consensus 117 d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~-~v~g~~~---~~~~~E~~~~~p~----- 184 (357)
T 2x6t_A 117 EAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSA-ATYGGRT---SDFIESREYEKPL----- 184 (357)
T ss_dssp CEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEG-GGGCSCS---SCCCSSGGGCCCS-----
T ss_pred CEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcch-HHhCCCC---CCCcCCcCCCCCC-----
Confidence 799999998664 3456788999999999999999999988 99999997 6677644 3458888766655
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC---CChhHHHHHHHHhCCCCc-cCC--c-ccCceeHHh
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY---VNASGAVLQRLLQGSKDT-QEH--Y-WLGAVHVKD 153 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~-~~~--~-~~~~i~v~D 153 (232)
+.|+.+|..+|++++.++++.+++++++||+.+||+..... ...+..++..+..+.++. +++ . .++++|++|
T Consensus 185 -~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 263 (357)
T 2x6t_A 185 -NVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD 263 (357)
T ss_dssp -SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHH
T ss_pred -ChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHH
Confidence 59999999999999998877899999999999999986531 135566677777777654 444 5 779999999
Q ss_pred HHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 154 VAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 154 ~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
+|++++.+++++. .+.|+++ ++.+++.|+++.+++.++
T Consensus 264 va~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g 302 (357)
T 2x6t_A 264 VADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHK 302 (357)
T ss_dssp HHHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcC
Confidence 9999999998776 5578775 578999999999999883
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.3e-25 Score=177.73 Aligned_cols=184 Identities=22% Similarity=0.281 Sum_probs=143.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.........++...++.|+.++.+++++|.+.++ ++|++||. .+|+... ..+++|+.+.... +..+
T Consensus 93 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~-~v~g~~~---~~~~~E~~~~~~~-~~~~ 166 (343)
T 2b69_A 93 DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTS-EVYGDPE---VHPQSEDYWGHVN-PIGP 166 (343)
T ss_dssp SEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEG-GGGBSCS---SSSBCTTCCCBCC-SSST
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcH-HHhCCCC---CCCCcccccccCC-CCCC
Confidence 799999998653112345678899999999999999999886 99999997 6787654 3457777532211 1122
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC-CChhHHHHHHHHhCCCCc-cC--CcccCceeHHhHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY-VNASGAVLQRLLQGSKDT-QE--HYWLGAVHVKDVAK 156 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~v~D~a~ 156 (232)
.+.|+.+|..+|+++..++++.+++++++||+.+||+..... ...+..++..+..+.++. ++ +..++++|++|+|+
T Consensus 167 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~ 246 (343)
T 2b69_A 167 RACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN 246 (343)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHH
Confidence 368999999999999998888899999999999999976532 235566777777887764 44 36789999999999
Q ss_pred HHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 157 AQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+++.++..+. .+.|+++ ++.+|+.|+++.+++.+
T Consensus 247 a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~ 281 (343)
T 2b69_A 247 GLVALMNSNV-SSPVNLGNPEEHTILEFAQLIKNLV 281 (343)
T ss_dssp HHHHHHTSSC-CSCEEESCCCEEEHHHHHHHHHHHH
T ss_pred HHHHHHhcCC-CCeEEecCCCCCcHHHHHHHHHHHh
Confidence 9999987653 4567665 57799999999999987
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.8e-25 Score=183.15 Aligned_cols=180 Identities=20% Similarity=0.180 Sum_probs=136.8
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc-CCCEEEEecccceeccCCCCCCCCccC--CCC---CC-C
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNWPQGKVID--ETS---WT-D 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~--E~~---~~-~ 73 (232)
|+|||+||.........++...+++|+.++.+|+++|.+. ++++||++||. .+|+... ..+++ |++ +. .
T Consensus 101 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~-~vyg~~~---~~~~~~~E~~~~~~~~~ 176 (377)
T 2q1s_A 101 DYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAG-CSIAEKT---FDDAKATEETDIVSLHN 176 (377)
T ss_dssp SEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC------------------CCCCCCCSSC
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCH-HHcCCCC---CCCcCcccccccccccC
Confidence 7999999986431112346788999999999999999998 89999999997 7787654 33577 877 43 3
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCC---------CCC---CChhHHHHHHHHhCCCCc-
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFP---------QPY---VNASGAVLQRLLQGSKDT- 140 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~---------~~~---~~~~~~~~~~~~~~~~~~- 140 (232)
+. +.|+.+|..+|+++..++++.+++++++||+.+||+.. ... ...+..++..+..+.++.
T Consensus 177 ~~------~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 250 (377)
T 2q1s_A 177 ND------SPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPL 250 (377)
T ss_dssp CC------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCC
T ss_pred CC------CchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEE
Confidence 33 58999999999999998877899999999999999986 220 235667777788887665
Q ss_pred cCC--cccCceeHHhHHHH-HHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 141 QEH--YWLGAVHVKDVAKA-QVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 141 ~~~--~~~~~i~v~D~a~~-~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+++ ..++++|++|+|++ ++.++..+. .|.|+++ ++.+++.|+++.+++.+
T Consensus 251 ~g~g~~~~~~i~v~Dva~a~i~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~ 304 (377)
T 2q1s_A 251 ENGGVATRDFIFVEDVANGLIACAADGTP-GGVYNIASGKETSIADLATKINEIT 304 (377)
T ss_dssp SGGGCCEECCEEHHHHHHHHHHHHHHCCT-TEEEECCCCCCEEHHHHHHHHHHHH
T ss_pred eCCCCeEEeeEEHHHHHHHHHHHHHhcCC-CCeEEecCCCceeHHHHHHHHHHHh
Confidence 443 77899999999999 999998765 4588775 57899999999999987
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=181.50 Aligned_cols=175 Identities=17% Similarity=0.110 Sum_probs=145.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.... ...++...+++|+.++.+++++|++.+++ ||++||. .+|+... . +++|+++..|.
T Consensus 92 D~vih~A~~~~~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~-~vyg~~~---~-~~~E~~~~~p~----- 158 (362)
T 3sxp_A 92 DYLFHQAAVSDT--TMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSA-GVYGNTK---A-PNVVGKNESPE----- 158 (362)
T ss_dssp SEEEECCCCCGG--GCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEG-GGGCSCC---S-SBCTTSCCCCS-----
T ss_pred CEEEECCccCCc--cccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcH-HHhCCCC---C-CCCCCCCCCCC-----
Confidence 799999997653 34668899999999999999999999886 9999996 7787654 2 68999877776
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC---CChhHHHHHHHHhCCCCc-cCC--cccCceeHHhH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY---VNASGAVLQRLLQGSKDT-QEH--YWLGAVHVKDV 154 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~ 154 (232)
+.|+.+|..+|++++.++.+ ++++++||+++|||+.... ...+..++..+..+.++. +++ ..++++|++|+
T Consensus 159 -~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv 235 (362)
T 3sxp_A 159 -NVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDV 235 (362)
T ss_dssp -SHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHH
T ss_pred -ChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHH
Confidence 59999999999999887644 8999999999999986542 135667777888887765 344 67899999999
Q ss_pred HHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 155 AKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 155 a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
|++++.++..+. .|.|+++ ++.+++.|+++.+++.++
T Consensus 236 a~ai~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 236 IQANVKAMKAQK-SGVYNVGYSQARSYNEIVSILKEHLG 273 (362)
T ss_dssp HHHHHHHTTCSS-CEEEEESCSCEEEHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHcC
Confidence 999999998775 4588775 678999999999999884
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-24 Score=173.29 Aligned_cols=189 Identities=28% Similarity=0.351 Sum_probs=144.8
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHH-cCCCEEEEecccceeccCCCC-CCCCccCCCCCCCcc---
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKK-FGVRRVVLTSSISSIVPNPNW-PQGKVIDETSWTDLD--- 75 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~-~~~~~~i~~Ss~~~~~~~~~~-~~~~~~~E~~~~~~~--- 75 (232)
|+|||+||.... ..++.+.+++|+.++.+++++|.+ .+++++|++||. .+|+.... ..+.+++|+++....
T Consensus 85 d~vih~A~~~~~---~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~-~~~~~~~~~~~~~~~~E~~~~~~~~~~ 160 (342)
T 1y1p_A 85 AGVAHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST-VSALIPKPNVEGIYLDEKSWNLESIDK 160 (342)
T ss_dssp SEEEECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG-GGTCCCCTTCCCCEECTTCCCHHHHHH
T ss_pred CEEEEeCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH-HHhcCCCCCCCCcccCccccCchhhhh
Confidence 799999998765 346788999999999999999985 578999999997 44543221 112568888743210
Q ss_pred -------cccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCC--ChhHHHHHHHHhCCCCc-cCC
Q 026820 76 -------FCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYV--NASGAVLQRLLQGSKDT-QEH 143 (232)
Q Consensus 76 -------~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~-~~~ 143 (232)
.+..+.+.|+.+|..+|.+++.++++. +++++++||+.+||+...... ..+..++..+..+.+.. +++
T Consensus 161 ~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T 1y1p_A 161 AKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALAL 240 (342)
T ss_dssp HHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHT
T ss_pred hccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCcccccc
Confidence 011233689999999999999988764 788999999999999865432 25667788888887765 333
Q ss_pred -cccCceeHHhHHHHHHHhhcCCCCCc-eEEEecCcccHHHHHHHHHhhCCC
Q 026820 144 -YWLGAVHVKDVAKAQVLLFETSAASG-RYLCTNGIYQFAEFAEKVSKLFPE 193 (232)
Q Consensus 144 -~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~~~s~~el~~~i~~~~p~ 193 (232)
..++++|++|+|++++.++..+...| .++++++.+|+.|+++.+++.++.
T Consensus 241 ~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~ 292 (342)
T 1y1p_A 241 MPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPS 292 (342)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTT
T ss_pred CCcCCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCC
Confidence 57799999999999999998765556 456677789999999999999854
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=181.47 Aligned_cols=196 Identities=36% Similarity=0.583 Sum_probs=134.7
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CCEEEEecccceeccCCCCCCCCccCCCCCCCccc--c
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF--C 77 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~--~ 77 (232)
|+|||+|+.... ....+..+++++|+.++.+++++|.+.+ +++|||+||.+++|+........+++|+.+..... +
T Consensus 82 D~Vih~A~~~~~-~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 160 (338)
T 2rh8_A 82 DFVFHVATPVHF-ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTS 160 (338)
T ss_dssp SEEEEESSCCCC----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-----
T ss_pred CEEEEeCCccCC-CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccc
Confidence 799999997643 1112224589999999999999999985 89999999986566542211113578876543221 0
Q ss_pred cc-cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccC--------CcccCc
Q 026820 78 KS-HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQE--------HYWLGA 148 (232)
Q Consensus 78 ~~-~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 148 (232)
.. ....|+.+|..+|.++..+.++.+++++++||+.+|||............+.....+....++ ++.++|
T Consensus 161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 240 (338)
T 2rh8_A 161 AKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSI 240 (338)
T ss_dssp --CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEE
T ss_pred cCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccE
Confidence 11 112599999999999999877779999999999999998654322222222233444432222 123489
Q ss_pred eeHHhHHHHHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhCCCCCCc
Q 026820 149 VHVKDVAKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~p~~~~~ 197 (232)
+|++|+|++++.+++++...++|+++++.+++.|+++.+++.+|..++|
T Consensus 241 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~~~~~~ 289 (338)
T 2rh8_A 241 AHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVP 289 (338)
T ss_dssp EEHHHHHHHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCTTSCCC
T ss_pred EEHHHHHHHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999987666668888777799999999999988654444
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=9.2e-25 Score=176.95 Aligned_cols=182 Identities=20% Similarity=0.189 Sum_probs=136.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.........++.+.+++|+.++.+++++|.+.+++++|++||. .+|+... ..+++|+++..|.
T Consensus 83 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~-~~~g~~~---~~~~~E~~~~~p~----- 153 (348)
T 1ek6_A 83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSA-TVYGNPQ---YLPLDEAHPTGGC----- 153 (348)
T ss_dssp EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG-GGGCSCS---SSSBCTTSCCCCC-----
T ss_pred CEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcH-HHhCCCC---CCCcCCCCCCCCC-----
Confidence 789999998643111234678899999999999999999999999999997 6787654 4568998876652
Q ss_pred chhHHHHHHHHHHHHHHHHHH-cCCcEEEEcCCCeeCCCCCC---------CCChhHHHHHHHH-hCCCCc-c-------
Q 026820 81 KIWYSMSKTLAEKAAWEFAEK-NGTDVVAIHPATSLGPFPQP---------YVNASGAVLQRLL-QGSKDT-Q------- 141 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~i~G~~~~~---------~~~~~~~~~~~~~-~~~~~~-~------- 141 (232)
.+.|+.+|..+|.+++.++++ .+++++++||+++||+...+ ....+..++..+. .+.++. +
T Consensus 154 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 233 (348)
T 1ek6_A 154 TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTE 233 (348)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred CCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCC
Confidence 169999999999999998776 23999999999999985311 1123334444333 333332 3
Q ss_pred -CCcccCceeHHhHHHHHHHhhcCC--CCC-ceEEEe-cCcccHHHHHHHHHhhC
Q 026820 142 -EHYWLGAVHVKDVAKAQVLLFETS--AAS-GRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 142 -~~~~~~~i~v~D~a~~~~~~~~~~--~~~-~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+++.++|+|++|+|++++.++.++ ..+ +.|+++ ++.+|+.|+++.+++.+
T Consensus 234 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~ 288 (348)
T 1ek6_A 234 DGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKAS 288 (348)
T ss_dssp SSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHH
T ss_pred CCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHh
Confidence 246789999999999999998765 233 368775 67799999999999987
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=174.22 Aligned_cols=185 Identities=22% Similarity=0.239 Sum_probs=140.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+.... ....++...++.|+.++.+++++|.+.+++++|++||. .+|+.... ..+.+|+.+..|.
T Consensus 64 d~vih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~-~~~~~~~~--~~~~~e~~~~~p~----- 134 (317)
T 3ajr_A 64 DAIFHLAGILSA-KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTI-GVFGPETP--KNKVPSITITRPR----- 134 (317)
T ss_dssp CEEEECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG-GGCCTTSC--SSSBCSSSCCCCC-----
T ss_pred cEEEECCcccCC-ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCH-HHhCCCCC--CCCccccccCCCC-----
Confidence 799999997542 11234678899999999999999999999999999997 66765321 3346777766655
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC---ChhHHHHHHHHhCCCCc-c--CCcccCceeHHhH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV---NASGAVLQRLLQGSKDT-Q--EHYWLGAVHVKDV 154 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~ 154 (232)
+.|+.+|..+|.+++.++++.+++++++||+.+||+...+.. ......+.+...++... . ++..++++|++|+
T Consensus 135 -~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 213 (317)
T 3ajr_A 135 -TMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDA 213 (317)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHH
T ss_pred -chHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHH
Confidence 599999999999999988888999999999999997643321 22333344444444433 3 3477899999999
Q ss_pred HHHHHHhhcCCCC---C-ceEEEecCcccHHHHHHHHHhhCCCCC
Q 026820 155 AKAQVLLFETSAA---S-GRYLCTNGIYQFAEFAEKVSKLFPEYP 195 (232)
Q Consensus 155 a~~~~~~~~~~~~---~-~~~~~~~~~~s~~el~~~i~~~~p~~~ 195 (232)
|++++.++.++.. . +.|+++++.+++.|+++.+.+.++..+
T Consensus 214 a~a~~~~l~~~~~~~~~g~~~~i~~~~~s~~e~~~~i~~~~~~~~ 258 (317)
T 3ajr_A 214 LKALVDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFE 258 (317)
T ss_dssp HHHHHHHHHCCGGGCSSCSCEECCSEEECHHHHHHHHHTTCCSCC
T ss_pred HHHHHHHHhCCccccccCceEecCCccccHHHHHHHHHHHCCccc
Confidence 9999999976543 2 478887777999999999999986433
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=6.7e-24 Score=173.39 Aligned_cols=180 Identities=16% Similarity=0.110 Sum_probs=144.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCC---CEEEEecccceeccCCCCCCCCccCCCCCCCcccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGV---RRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC 77 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~---~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~ 77 (232)
|+|||+||.........++...+++|+.++.+++++|.+.++ +++|++||. .+|+... ..+++|+++..+.
T Consensus 80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~-~v~g~~~---~~~~~E~~~~~~~-- 153 (372)
T 1db3_A 80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTS-ELYGLVQ---EIPQKETTPFYPR-- 153 (372)
T ss_dssp SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG-GGGTTCC---SSSBCTTSCCCCC--
T ss_pred CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCh-hhhCCCC---CCCCCccCCCCCC--
Confidence 799999998765434456778889999999999999999887 799999997 6677654 3468888877665
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC--ChhHHHHHHHHhCCCC--ccC--CcccCceeH
Q 026820 78 KSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV--NASGAVLQRLLQGSKD--TQE--HYWLGAVHV 151 (232)
Q Consensus 78 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~--~~~--~~~~~~i~v 151 (232)
+.|+.+|..+|.+++.++.+.+++++++|++.+|||...... ..+..++..+..+... .++ ++.++++|+
T Consensus 154 ----~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v 229 (372)
T 1db3_A 154 ----SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHA 229 (372)
T ss_dssp ----SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEH
T ss_pred ----ChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEH
Confidence 599999999999999998888999999999999999764322 1234455566666542 233 477899999
Q ss_pred HhHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 152 KDVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+|+|++++.++.++. .+.|+++ ++.+|+.|+++.+.+.+
T Consensus 230 ~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~ 269 (372)
T 1db3_A 230 KDYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQL 269 (372)
T ss_dssp HHHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHh
Confidence 999999999997764 3678664 67799999999999988
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7.1e-25 Score=174.05 Aligned_cols=173 Identities=14% Similarity=0.087 Sum_probs=140.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.........++.+.++.|+.++.+++++|++.++ ++||+||. .+|+... ..+++|+++..|.
T Consensus 56 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~-~vy~~~~---~~~~~E~~~~~p~----- 125 (299)
T 1n2s_A 56 DVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTD-YVFPGTG---DIPWQETDATSPL----- 125 (299)
T ss_dssp SEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEG-GGSCCCT---TCCBCTTSCCCCS-----
T ss_pred CEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecc-cEEeCCC---CCCCCCCCCCCCc-----
Confidence 799999998653222356788999999999999999999887 89999997 6677654 4468898877665
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~ 159 (232)
+.|+.+|..+|+++..+ ..+++++||+.+||+... ..+..++..+..+.++. .+++.++++|++|+|++++
T Consensus 126 -~~Y~~sK~~~E~~~~~~----~~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 197 (299)
T 1n2s_A 126 -NVYGKTKLAGEKALQDN----CPKHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTA 197 (299)
T ss_dssp -SHHHHHHHHHHHHHHHH----CSSEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHH
T ss_pred -cHHHHHHHHHHHHHHHh----CCCeEEEeeeeecCCCcC---cHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHH
Confidence 59999999999998876 348999999999999754 35566677777777665 6778889999999999999
Q ss_pred HhhcCC--CC--CceEEEe-cCcccHHHHHHHHHhhC
Q 026820 160 LLFETS--AA--SGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 160 ~~~~~~--~~--~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
.++.++ .. .+.|+++ ++.+|+.|+++.+++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~ 234 (299)
T 1n2s_A 198 HAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEA 234 (299)
T ss_dssp HHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHH
T ss_pred HHHHHhccccccCceEEEeCCCCCCHHHHHHHHHHHh
Confidence 999775 22 4578765 57899999999998776
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-25 Score=175.40 Aligned_cols=162 Identities=14% Similarity=0.109 Sum_probs=128.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||... .++...++.|+.++.+++++|.+.++++|||+||. .+|+... +.+++|+++..|.
T Consensus 65 d~vih~a~~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~-~vyg~~~---~~~~~E~~~~~p~----- 130 (286)
T 3gpi_A 65 EILVYCVAASE-----YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSST-GVYGQEV---EEWLDEDTPPIAK----- 130 (286)
T ss_dssp SEEEECHHHHH-----HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEG-GGCCCCC---SSEECTTSCCCCC-----
T ss_pred CEEEEeCCCCC-----CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEccc-EEEcCCC---CCCCCCCCCCCCC-----
Confidence 79999999743 34678889999999999999999999999999997 7788654 5568999887776
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~ 159 (232)
+.|+.+|..+|++ ..+ ++++++||+.+||+... .++..+.. .... .++..++++|++|+|++++
T Consensus 131 -~~Y~~sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~-------~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~~ 195 (286)
T 3gpi_A 131 -DFSGKRMLEAEAL-LAA-----YSSTILRFSGIYGPGRL-------RMIRQAQT-PEQWPARNAWTNRIHRDDGAAFIA 195 (286)
T ss_dssp -SHHHHHHHHHHHH-GGG-----SSEEEEEECEEEBTTBC-------HHHHHTTC-GGGSCSSBCEECEEEHHHHHHHHH
T ss_pred -ChhhHHHHHHHHH-Hhc-----CCeEEEecccccCCCch-------hHHHHHHh-cccCCCcCceeEEEEHHHHHHHHH
Confidence 5999999999999 543 89999999999998743 23444444 2222 4457789999999999999
Q ss_pred HhhcCC---CCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 160 LLFETS---AASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 160 ~~~~~~---~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
.++.++ ...+.|+++ ++.+|+.|+++.+++.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~ 231 (286)
T 3gpi_A 196 YLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQ 231 (286)
T ss_dssp HHHHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHT
T ss_pred HHHhhhccCCCCceEEEeCCCCCCHHHHHHHHHHHc
Confidence 999874 444578776 57799999999999998
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=176.38 Aligned_cols=181 Identities=17% Similarity=0.090 Sum_probs=142.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCC---CEEEEecccceeccCCCCCCCCccCCCCCCCcccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGV---RRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC 77 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~---~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~ 77 (232)
|+|||+||.........++...+++|+.++.+++++|.+.++ ++||++||. .+|+... ..+++|+++..+.
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~-~~~~~~~---~~~~~E~~~~~~~-- 177 (375)
T 1t2a_A 104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTS-ELYGKVQ---EIPQKETTPFYPR-- 177 (375)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG-GGTCSCS---SSSBCTTSCCCCC--
T ss_pred CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecch-hhhCCCC---CCCCCccCCCCCC--
Confidence 799999998653111234677889999999999999999887 799999997 6677544 4468898876665
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC--ChhHHHHHHHHhCCCCc--cC--CcccCceeH
Q 026820 78 KSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV--NASGAVLQRLLQGSKDT--QE--HYWLGAVHV 151 (232)
Q Consensus 78 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~--~~--~~~~~~i~v 151 (232)
+.|+.+|..+|.++..++++.+++++++|++.+|||...... ..+..++.++..+.... ++ +..++++|+
T Consensus 178 ----~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v 253 (375)
T 1t2a_A 178 ----SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA 253 (375)
T ss_dssp ----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEH
T ss_pred ----ChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEH
Confidence 599999999999999988888999999999999999754322 12344555666675432 33 467899999
Q ss_pred HhHHHHHHHhhcCCCCCceEEE-ecCcccHHHHHHHHHhhCC
Q 026820 152 KDVAKAQVLLFETSAASGRYLC-TNGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~p 192 (232)
+|+|++++.+++++. .+.|++ +++.+|+.|+++.+++.++
T Consensus 254 ~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g 294 (375)
T 1t2a_A 254 KDYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIG 294 (375)
T ss_dssp HHHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhC
Confidence 999999999998765 367766 4677999999999999983
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-24 Score=175.53 Aligned_cols=183 Identities=15% Similarity=0.110 Sum_probs=142.3
Q ss_pred CeEEEeecCCCCC-CCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCC--CCCccCCCC--CCCcc
Q 026820 1 MGVFHLASPNTLD-DPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP--QGKVIDETS--WTDLD 75 (232)
Q Consensus 1 D~Vih~a~~~~~~-~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~--~~~~~~E~~--~~~~~ 75 (232)
|+|||+|+..... ....++.+.+++|+.++.+++++|.+.++++||++||. .+|+..... ...+++|++ +..+
T Consensus 95 d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~-~v~~~~~~~~~~~~~~~E~~~~~~~~- 172 (379)
T 2c5a_A 95 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSA-CIYPEFKQLETTNVSLKESDAWPAEP- 172 (379)
T ss_dssp SEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEG-GGSCGGGSSSSSSCEECGGGGSSBCC-
T ss_pred CEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeeh-heeCCCCCCCccCCCcCcccCCCCCC-
Confidence 7999999986531 11345788999999999999999999999999999997 667653210 123467765 2223
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC---ChhHHHHHHHHhCCC-Cc-cCC--cccCc
Q 026820 76 FCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV---NASGAVLQRLLQGSK-DT-QEH--YWLGA 148 (232)
Q Consensus 76 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~~~-~~-~~~--~~~~~ 148 (232)
.+.|+.+|..+|.+++.++++.+++++++||+.+||+...... ..+..++..+..+.+ +. +++ ..+++
T Consensus 173 -----~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ 247 (379)
T 2c5a_A 173 -----QDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSF 247 (379)
T ss_dssp -----SSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECC
T ss_pred -----CChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEE
Confidence 3689999999999999988888999999999999999765321 245667777777765 33 443 67899
Q ss_pred eeHHhHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 149 VHVKDVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+|++|+|++++.++..+ ..+.|+++ ++.+++.|+++.+++.+
T Consensus 248 i~v~Dva~ai~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~ 290 (379)
T 2c5a_A 248 TFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFE 290 (379)
T ss_dssp EEHHHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTT
T ss_pred EEHHHHHHHHHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHh
Confidence 99999999999999776 34567665 67899999999999988
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=176.61 Aligned_cols=183 Identities=19% Similarity=0.211 Sum_probs=143.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc--CCC-------EEEEecccceeccCCCCC-------CCC
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF--GVR-------RVVLTSSISSIVPNPNWP-------QGK 64 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~-------~~i~~Ss~~~~~~~~~~~-------~~~ 64 (232)
|+|||+||.........++...+++|+.++.+++++|.+. +++ +||++||. .+|+..... ...
T Consensus 75 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~-~v~g~~~~~~~~~~~~~~~ 153 (361)
T 1kew_A 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD-EVYGDLPHPDEVENSVTLP 153 (361)
T ss_dssp SEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEG-GGGCCCCCGGGSCTTSCCC
T ss_pred CEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCH-HHhCCCcccccccccccCC
Confidence 7999999986421112346788999999999999999988 887 99999997 667754310 001
Q ss_pred ccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCC
Q 026820 65 VIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEH 143 (232)
Q Consensus 65 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 143 (232)
+++|+++..+. +.|+.+|..+|.+++.++++.+++++++||+.+||+..... ..+..++..+..+.++. +++
T Consensus 154 ~~~E~~~~~~~------~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 226 (361)
T 1kew_A 154 LFTETTAYAPS------SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGK 226 (361)
T ss_dssp CBCTTSCCCCC------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETT
T ss_pred CCCCCCCCCCC------CccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEcCC
Confidence 57888766555 59999999999999998888899999999999999986542 35566777777777654 343
Q ss_pred --cccCceeHHhHHHHHHHhhcCCCCCceEEEec-CcccHHHHHHHHHhhC
Q 026820 144 --YWLGAVHVKDVAKAQVLLFETSAASGRYLCTN-GIYQFAEFAEKVSKLF 191 (232)
Q Consensus 144 --~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~el~~~i~~~~ 191 (232)
..++++|++|+|++++.++.....+..|++++ ..+++.|+++.+++.+
T Consensus 227 ~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~ 277 (361)
T 1kew_A 227 GDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLL 277 (361)
T ss_dssp SCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHH
T ss_pred CceeEeeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHh
Confidence 67899999999999999997664434787764 6699999999998775
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=178.33 Aligned_cols=184 Identities=20% Similarity=0.202 Sum_probs=138.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCC----CCCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNW----PQGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~----~~~~~~~E~~~~~~~~ 76 (232)
|+|||+||.........++...+++|+.++.+++++|.+.++++||++||. .+|+.... ....+++|+++..+.
T Consensus 95 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~-~v~g~~~~~~~~~~~~~~~E~~~~~p~- 172 (397)
T 1gy8_A 95 DAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSA-AIFGNPTMGSVSTNAEPIDINAKKSPE- 172 (397)
T ss_dssp CEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG-GGTBSCCC-----CCCCBCTTSCCBCS-
T ss_pred CEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCH-HHhCCCCcccccccccCcCccCCCCCC-
Confidence 799999998653111234678899999999999999999999999999996 67775431 012458888876655
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCC--------CCChhHHHH----HHHHhCCC------
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP--------YVNASGAVL----QRLLQGSK------ 138 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~--------~~~~~~~~~----~~~~~~~~------ 138 (232)
+.|+.+|..+|.+++.++.+.+++++++||+.+||+...+ ....+..++ .++..+..
T Consensus 173 -----~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (397)
T 1gy8_A 173 -----SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHED 247 (397)
T ss_dssp -----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--------
T ss_pred -----CchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccc
Confidence 5999999999999999888889999999999999997421 122333333 14444432
Q ss_pred ------Cc-c--------CCcccCceeHHhHHHHHHHhhcCCCC------C---ceEEEe-cCcccHHHHHHHHHhhC
Q 026820 139 ------DT-Q--------EHYWLGAVHVKDVAKAQVLLFETSAA------S---GRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 139 ------~~-~--------~~~~~~~i~v~D~a~~~~~~~~~~~~------~---~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+. + +++.++|+|++|+|++++.++..+.. . +.|+++ ++.+|+.|+++.+++.+
T Consensus 248 ~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 325 (397)
T 1gy8_A 248 ASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTT 325 (397)
T ss_dssp ---CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred cccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHHHHHHh
Confidence 22 3 23678999999999999999875432 2 568775 67899999999999987
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=176.52 Aligned_cols=184 Identities=18% Similarity=0.171 Sum_probs=138.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCC-EEEEecccceeccCCCCCC-------------CCcc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVR-RVVLTSSISSIVPNPNWPQ-------------GKVI 66 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~i~~Ss~~~~~~~~~~~~-------------~~~~ 66 (232)
|+|||+||.........++...+++|+.++.+++++|.+.+++ +||++||. .+|+.....+ ...+
T Consensus 75 d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~-~v~g~~~~~~~~e~~~~~~~~~~~~~~ 153 (347)
T 1orr_A 75 DSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTN-KVYGDLEQYKYNETETRYTCVDKPNGY 153 (347)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEG-GGGTTCTTSCEEECSSCEEETTCTTCB
T ss_pred CEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccH-HHhCCCCcCCcccccccccccccccCc
Confidence 7999999985421112356788999999999999999998886 99999997 6677543210 1125
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC--CChhHHHHHHHHhCC-----CC
Q 026820 67 DETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY--VNASGAVLQRLLQGS-----KD 139 (232)
Q Consensus 67 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~--~~~~~~~~~~~~~~~-----~~ 139 (232)
+|+.+..+. +.|+.+|..+|++++.++++.+++++++||+.+||+..... ...+..++.++..+. ++
T Consensus 154 ~e~~~~~~~------~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (347)
T 1orr_A 154 DESTQLDFH------SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPF 227 (347)
T ss_dssp CTTSCCCCC------HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCE
T ss_pred cccCCCCCC------CchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCe
Confidence 555554444 69999999999999998888899999999999999976432 124455666665554 33
Q ss_pred c-c--CCcccCceeHHhHHHHHHHhhcC-CCCCc-eEEEec-C--cccHHHHHHHHHhhC
Q 026820 140 T-Q--EHYWLGAVHVKDVAKAQVLLFET-SAASG-RYLCTN-G--IYQFAEFAEKVSKLF 191 (232)
Q Consensus 140 ~-~--~~~~~~~i~v~D~a~~~~~~~~~-~~~~~-~~~~~~-~--~~s~~el~~~i~~~~ 191 (232)
. + +++.++++|++|+|++++.++.. ....| .|++++ . .+|+.|+++.+++.+
T Consensus 228 ~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~ 287 (347)
T 1orr_A 228 TISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYC 287 (347)
T ss_dssp EEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHH
T ss_pred EEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHh
Confidence 3 3 34678999999999999999875 23345 688865 3 499999999999987
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-24 Score=169.99 Aligned_cols=171 Identities=16% Similarity=0.146 Sum_probs=137.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.........++...++.|+.++.+++++|.+.++ ++|++||. .+|+... ..+++|+++..+.
T Consensus 65 d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~-~v~~~~~---~~~~~E~~~~~~~----- 134 (292)
T 1vl0_A 65 NVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTD-YVFDGEA---KEPITEFDEVNPQ----- 134 (292)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEG-GGSCSCC---SSCBCTTSCCCCC-----
T ss_pred CEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechH-HeECCCC---CCCCCCCCCCCCc-----
Confidence 799999998653111245678899999999999999999887 99999997 6677644 4468998877665
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~ 159 (232)
+.|+.+|..+|.+++.+ +.+++++||+.+||+ .. ..+..++..+..+.++. .++..++++|++|+|++++
T Consensus 135 -~~Y~~sK~~~E~~~~~~----~~~~~~lR~~~v~G~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~ 205 (292)
T 1vl0_A 135 -SAYGKTKLEGENFVKAL----NPKYYIVRTAWLYGD-GN---NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVL 205 (292)
T ss_dssp -SHHHHHHHHHHHHHHHH----CSSEEEEEECSEESS-SS---CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHH
T ss_pred -cHHHHHHHHHHHHHHhh----CCCeEEEeeeeeeCC-Cc---ChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHH
Confidence 59999999999998775 457999999999999 22 35556666666676654 6667889999999999999
Q ss_pred HhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 160 LLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 160 ~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
.++..+ ..+.|+++ ++.+|+.|+++.+++.+
T Consensus 206 ~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~ 237 (292)
T 1vl0_A 206 KVIDEK-NYGTFHCTCKGICSWYDFAVEIFRLT 237 (292)
T ss_dssp HHHHHT-CCEEEECCCBSCEEHHHHHHHHHHHH
T ss_pred HHHhcC-CCcEEEecCCCCccHHHHHHHHHHHh
Confidence 999876 44578765 57799999999999987
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-24 Score=171.11 Aligned_cols=176 Identities=18% Similarity=0.121 Sum_probs=123.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.........++...+++|+.++.+++++|.+.++ ++||+||. .+|+. . ..+++|+++..+.
T Consensus 62 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~-~v~~~-~---~~~~~E~~~~~~~----- 130 (315)
T 2ydy_A 62 HVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSD-YVFDG-T---NPPYREEDIPAPL----- 130 (315)
T ss_dssp SEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEG-GGSCS-S---SCSBCTTSCCCCC-----
T ss_pred CEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchH-HHcCC-C---CCCCCCCCCCCCc-----
Confidence 799999998765333456788999999999999999999886 99999998 56765 2 4458998876665
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHH-hCCCCc-cCCcccCceeHHhHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLL-QGSKDT-QEHYWLGAVHVKDVAKAQ 158 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~i~v~D~a~~~ 158 (232)
+.|+.+|..+|+++..+ +.+++++||+.+||+........+..++..+. .+.++. .++..++++|++|+|+++
T Consensus 131 -~~Y~~sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 205 (315)
T 2ydy_A 131 -NLYGKTKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVC 205 (315)
T ss_dssp -SHHHHHHHHHHHHHHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHH
Confidence 59999999999998775 67889999999999876521123333455555 555544 556788999999999999
Q ss_pred HHhhcCC----CCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 159 VLLFETS----AASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 159 ~~~~~~~----~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
+.++.+. ...+.|+++ ++.+++.|+++.+++.++
T Consensus 206 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g 244 (315)
T 2ydy_A 206 RQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFN 244 (315)
T ss_dssp HHHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTT
T ss_pred HHHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhC
Confidence 9988753 334478765 578999999999999883
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.5e-24 Score=170.66 Aligned_cols=182 Identities=18% Similarity=0.167 Sum_probs=133.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||..........+.+.++.|+.++.+++++|++.+++++|++||. .+|+... ..+++|+.+..+.
T Consensus 75 D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~-~~~g~~~---~~~~~e~~~~~~~----- 145 (338)
T 1udb_A 75 DTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSA-TVYGDNP---KIPYVESFPTGTP----- 145 (338)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEG-GGGCSCC---SSSBCTTSCCCCC-----
T ss_pred CEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccH-HHhCCCC---CCCcCcccCCCCC-----
Confidence 799999997543111224567889999999999999998888999999997 6787644 4467888765442
Q ss_pred chhHHHHHHHHHHHHHHHHHHc-CCcEEEEcCCCeeCCCCC------CC--CChhHHHHHHHHhC--CCCc-c-------
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKN-GTDVVAIHPATSLGPFPQ------PY--VNASGAVLQRLLQG--SKDT-Q------- 141 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~------~~--~~~~~~~~~~~~~~--~~~~-~------- 141 (232)
.+.|+.+|..+|.+++.++++. +++++++||+++||+... .. ...+...+.....+ ..+. +
T Consensus 146 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 225 (338)
T 1udb_A 146 QSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTE 225 (338)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred CChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCC
Confidence 2589999999999999988776 899999999999998431 10 11222333333332 2221 2
Q ss_pred -CCcccCceeHHhHHHHHHHhhcCC--CCC-ceEEEe-cCcccHHHHHHHHHhhC
Q 026820 142 -EHYWLGAVHVKDVAKAQVLLFETS--AAS-GRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 142 -~~~~~~~i~v~D~a~~~~~~~~~~--~~~-~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+++.++|+|++|+|++++.+++.. ... +.|+++ ++.+|+.|+++.+++.+
T Consensus 226 ~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~ 280 (338)
T 1udb_A 226 DGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKAC 280 (338)
T ss_dssp SSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred CCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHh
Confidence 336789999999999999988753 222 368775 67799999999999887
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-23 Score=167.97 Aligned_cols=181 Identities=15% Similarity=0.073 Sum_probs=141.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCC-CEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGV-RRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+||.........++...+++|+.++.+++++|.+.++ +++|++||. .+||... +.+++|+.+..+.
T Consensus 77 d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~-~vyg~~~---~~~~~e~~~~~~~---- 148 (345)
T 2z1m_A 77 DEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTS-EMFGKVQ---EIPQTEKTPFYPR---- 148 (345)
T ss_dssp SEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEG-GGGCSCS---SSSBCTTSCCCCC----
T ss_pred CEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEech-hhcCCCC---CCCCCccCCCCCC----
Confidence 799999998653222345788999999999999999998887 899999997 6787654 4458888776665
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC--ChhHHHHHHHHhCCCCc--cC--CcccCceeHHh
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV--NASGAVLQRLLQGSKDT--QE--HYWLGAVHVKD 153 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~--~~--~~~~~~i~v~D 153 (232)
+.|+.+|..+|.+++.++.+.+++++++|++++|||+..... ..+..++.++..+.... .+ +..++++|++|
T Consensus 149 --~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~D 226 (345)
T 2z1m_A 149 --SPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPE 226 (345)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHH
T ss_pred --ChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHH
Confidence 599999999999999998888999999999999999754321 11233344555564332 33 36789999999
Q ss_pred HHHHHHHhhcCCCCCceEEE-ecCcccHHHHHHHHHhhCC
Q 026820 154 VAKAQVLLFETSAASGRYLC-TNGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 154 ~a~~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~p 192 (232)
+|++++.++.++. .+.|++ +++.+++.|+++.+++.++
T Consensus 227 va~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g 265 (345)
T 2z1m_A 227 YVEAMWLMMQQPE-PDDYVIATGETHTVREFVEKAAKIAG 265 (345)
T ss_dssp HHHHHHHHHTSSS-CCCEEECCSCCEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCC-CceEEEeCCCCccHHHHHHHHHHHhC
Confidence 9999999998764 367766 4678999999999999983
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.8e-23 Score=174.24 Aligned_cols=182 Identities=15% Similarity=0.043 Sum_probs=137.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccc---
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC--- 77 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~--- 77 (232)
|+|||+||..+. .++.+.++.|+.++.+++++|.+.++++|||+||. .+|+... ..+++|+.+..+..+
T Consensus 169 D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~-~v~~~~~---~~~~~E~~~~~p~~~~~~ 240 (478)
T 4dqv_A 169 DLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTA-DVGAAIE---PSAFTEDADIRVISPTRT 240 (478)
T ss_dssp CEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEG-GGGTTSC---TTTCCSSSCHHHHCCEEE
T ss_pred CEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeh-hhcCccC---CCCcCCcccccccCcccc
Confidence 799999999774 45678999999999999999999999999999997 6677644 345788876544321
Q ss_pred --cccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCC----CCChhHHHHHHHHhCCCC-c-c--------
Q 026820 78 --KSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP----YVNASGAVLQRLLQGSKD-T-Q-------- 141 (232)
Q Consensus 78 --~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~----~~~~~~~~~~~~~~~~~~-~-~-------- 141 (232)
....+.|+.+|+.+|++++.++++.+++++++||+.|||+.... ....+..++......+.. . +
T Consensus 241 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~ 320 (478)
T 4dqv_A 241 VDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGN 320 (478)
T ss_dssp CCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSC
T ss_pred cccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccccccccccccc
Confidence 11224699999999999999987789999999999999986421 122444555544432221 1 1
Q ss_pred -CCcccCceeHHhHHHHHHHhhcC----CCCCc-eEEEe-cCc--ccHHHHHHHHHhh
Q 026820 142 -EHYWLGAVHVKDVAKAQVLLFET----SAASG-RYLCT-NGI--YQFAEFAEKVSKL 190 (232)
Q Consensus 142 -~~~~~~~i~v~D~a~~~~~~~~~----~~~~~-~~~~~-~~~--~s~~el~~~i~~~ 190 (232)
++..++++|++|+|++++.++.+ +...+ .|++. ++. +++.|+++.+++.
T Consensus 321 ~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~ 378 (478)
T 4dqv_A 321 RQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378 (478)
T ss_dssp CCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred cccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence 14577999999999999999875 33334 68775 555 9999999999984
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=164.78 Aligned_cols=162 Identities=14% Similarity=0.119 Sum_probs=128.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHH--cCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKK--FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCK 78 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~--~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~ 78 (232)
|+|||+|+.... . ...+.+++++|++ .++++|||+||. .+|+... ..+++|+++..|.
T Consensus 65 d~vi~~a~~~~~---~----------~~~~~~l~~a~~~~~~~~~~~v~~Ss~-~vyg~~~---~~~~~E~~~~~p~--- 124 (286)
T 3ius_A 65 THLLISTAPDSG---G----------DPVLAALGDQIAARAAQFRWVGYLSTT-AVYGDHD---GAWVDETTPLTPT--- 124 (286)
T ss_dssp CEEEECCCCBTT---B----------CHHHHHHHHHHHHTGGGCSEEEEEEEG-GGGCCCT---TCEECTTSCCCCC---
T ss_pred CEEEECCCcccc---c----------cHHHHHHHHHHHhhcCCceEEEEeecc-eecCCCC---CCCcCCCCCCCCC---
Confidence 799999998653 1 1235789999988 688999999997 7788654 5568999987776
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc--cCCcccCceeHHhHHH
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT--QEHYWLGAVHVKDVAK 156 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~ 156 (232)
+.|+.+|..+|+++..+ .+++++++||+.+||+.... +.++..+.... .+++.++++|++|+|+
T Consensus 125 ---~~Y~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 190 (286)
T 3ius_A 125 ---AARGRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGP--------FSKLGKGGIRRIIKPGQVFSRIHVEDIAQ 190 (286)
T ss_dssp ---SHHHHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSS--------STTSSSSCCCEEECTTCCBCEEEHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHhh---cCCCEEEEeccceECCCchH--------HHHHhcCCccccCCCCcccceEEHHHHHH
Confidence 59999999999998775 58999999999999997543 12234455444 3346789999999999
Q ss_pred HHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCCCCCCc
Q 026820 157 AQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p~~~~~ 197 (232)
+++.++.++..++.|+++ ++.+++.|+++.+++.+ +.+.+
T Consensus 191 a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~-g~~~~ 231 (286)
T 3ius_A 191 VLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQ-GLPLP 231 (286)
T ss_dssp HHHHHHHSCCTTCEEEECCSCCBCHHHHHHHHHHHH-TCCCC
T ss_pred HHHHHHhCCCCCCEEEEeCCCCccHHHHHHHHHHHc-CCCCC
Confidence 999999988755578775 67799999999999998 44444
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.8e-23 Score=170.49 Aligned_cols=179 Identities=19% Similarity=0.135 Sum_probs=138.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCC--CCCCCccCCCCCCCccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPN--WPQGKVIDETSWTDLDFCK 78 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~--~~~~~~~~E~~~~~~~~~~ 78 (232)
|+|||+||.... ..++...+++|+.++.+++++|.+ ++++||++||.++ |... .....+++|+++..+.
T Consensus 152 d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~--G~~~~~~~~~~~~~E~~~~~~~--- 222 (427)
T 4f6c_A 152 DTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV--GTYFDIDTEDVTFSEADVYKGQ--- 222 (427)
T ss_dssp SEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG--GSEECSSCSCCEECTTCSCSSC---
T ss_pred CEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh--CCCccCCCCCccccccccccCC---
Confidence 799999999764 456788999999999999999999 7789999999854 4321 1225678888874332
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC------ChhHHHHHHHHhCCCCcc--CCcccCcee
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV------NASGAVLQRLLQGSKDTQ--EHYWLGAVH 150 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~~~i~ 150 (232)
.+.+.|+.+|+.+|.++..+. +.|++++++||+.|||+...... ..+..++..+..++.+.. ++..++++|
T Consensus 223 ~~~~~Y~~sK~~~E~~~~~~~-~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 301 (427)
T 4f6c_A 223 LLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSF 301 (427)
T ss_dssp CCCSHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEE
T ss_pred CCCCchHHHHHHHHHHHHHHH-HcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEee
Confidence 133699999999999999975 46999999999999999865431 235667777777776653 568889999
Q ss_pred HHhHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHh
Q 026820 151 VKDVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSK 189 (232)
Q Consensus 151 v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~ 189 (232)
++|+|++++.++..+...++|+++ ++++++.|+++.+++
T Consensus 302 v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~ 341 (427)
T 4f6c_A 302 VDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR 341 (427)
T ss_dssp HHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH
Confidence 999999999999887744478775 677999999999998
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=171.55 Aligned_cols=180 Identities=15% Similarity=0.065 Sum_probs=141.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCC-----EEEEecccceeccCCCCCCCCccCCCCCCCcc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVR-----RVVLTSSISSIVPNPNWPQGKVIDETSWTDLD 75 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-----~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~ 75 (232)
|+|||+||.........++...+++|+.++.+++++|.+.+++ +||++||. .+|+... . +++|+++..+.
T Consensus 108 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~-~vyg~~~---~-~~~E~~~~~~~ 182 (381)
T 1n7h_A 108 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSS-EMFGSTP---P-PQSETTPFHPR 182 (381)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG-GGGTTSC---S-SBCTTSCCCCC
T ss_pred CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcH-HHhCCCC---C-CCCCCCCCCCC
Confidence 7999999986531112346788899999999999999988766 99999997 6687654 3 68898876665
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC--ChhHHHHHHHHhCCCCc--cC--CcccCce
Q 026820 76 FCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV--NASGAVLQRLLQGSKDT--QE--HYWLGAV 149 (232)
Q Consensus 76 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~--~~--~~~~~~i 149 (232)
+.|+.+|..+|.++..++.+.+++++++|++++|||+..... ..+..++..+..+.... ++ +..++|+
T Consensus 183 ------~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v 256 (381)
T 1n7h_A 183 ------SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWG 256 (381)
T ss_dssp ------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECE
T ss_pred ------CchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeE
Confidence 599999999999999988888999999999999999764322 12334455566665432 34 4678999
Q ss_pred eHHhHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 150 HVKDVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
|++|+|++++.++..+. .+.|+++ ++.+++.|+++.+++.++
T Consensus 257 ~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g 299 (381)
T 1n7h_A 257 FAGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLG 299 (381)
T ss_dssp EHHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTT
T ss_pred EHHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcC
Confidence 99999999999998764 3677665 567999999999999883
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.8e-23 Score=174.45 Aligned_cols=181 Identities=19% Similarity=0.122 Sum_probs=137.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCC--CCCCCccCCCCCCCccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPN--WPQGKVIDETSWTDLDFCK 78 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~--~~~~~~~~E~~~~~~~~~~ 78 (232)
|+|||+||.... ..++..+.+.|+.++++++++|.+ +.++|||+||.++ |... ...+.+++|+++..+.
T Consensus 233 D~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v--G~~~~~~~~~~~~~E~~~~~~~--- 303 (508)
T 4f6l_B 233 DTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV--GTYFDIDTEDVTFSEADVYKGQ--- 303 (508)
T ss_dssp SEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT--TSEECTTCSCCEECTTCSCSSB---
T ss_pred CEEEECCceecC---CCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh--ccCCccCCcCcccccccccccc---
Confidence 799999999765 556788999999999999999998 6689999999844 3311 1225678888874332
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC------ChhHHHHHHHHhCCCCcc--CCcccCcee
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV------NASGAVLQRLLQGSKDTQ--EHYWLGAVH 150 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~~~i~ 150 (232)
.+.+.|+.+|+.+|+++..+. +.|++++|+||+.|||+...+.. ..+..++..+..++.+.. +++.++|+|
T Consensus 304 ~~~~~Y~~sK~~~E~~~~~~~-~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~ 382 (508)
T 4f6l_B 304 LLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSF 382 (508)
T ss_dssp CCCSHHHHHHHHHHHHHHHHH-HTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEE
T ss_pred cCCCcHHHHHHHHHHHHHHHH-HcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEc
Confidence 133699999999999999975 46999999999999999765421 235667777777666553 467889999
Q ss_pred HHhHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 151 VKDVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 151 v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
++|+|++++.++..+...+.|+++ ++.+++.|+++.+++..
T Consensus 383 v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 383 VDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE 424 (508)
T ss_dssp HHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence 999999999999887744578775 57799999999999754
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=6e-23 Score=179.36 Aligned_cols=186 Identities=18% Similarity=0.211 Sum_probs=144.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccc-cc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC-KS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~-~~ 79 (232)
|+|||+||.........++.+.++.|+.++.+++++|.+.+ ++||++||. .+|+... ..+++|+++.....+ ..
T Consensus 384 D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~-~vyg~~~---~~~~~E~~~~~~~~p~~~ 458 (660)
T 1z7e_A 384 DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTS-EVYGMCS---DKYFDEDHSNLIVGPVNK 458 (660)
T ss_dssp SEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCG-GGGBTCC---SSSBCTTTCCEEECCTTC
T ss_pred CEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecH-HHcCCCC---CcccCCCccccccCcccC
Confidence 79999999865311123567889999999999999999988 899999997 6677654 445888876422111 12
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCC-------CCChhHHHHHHHHhCCCCc-cC--CcccCce
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP-------YVNASGAVLQRLLQGSKDT-QE--HYWLGAV 149 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~-------~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i 149 (232)
+.+.|+.+|..+|+++..++++.+++++++||+.+||+.... ....+..++.++..+.++. .+ ++.++|+
T Consensus 459 p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i 538 (660)
T 1z7e_A 459 PRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFT 538 (660)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECE
T ss_pred CCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEE
Confidence 346899999999999999887789999999999999998642 1235567777888887765 33 4678999
Q ss_pred eHHhHHHHHHHhhcCCC--CCc-eEEEec-C-cccHHHHHHHHHhhC
Q 026820 150 HVKDVAKAQVLLFETSA--ASG-RYLCTN-G-IYQFAEFAEKVSKLF 191 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~-~-~~s~~el~~~i~~~~ 191 (232)
|++|+|++++.++..+. ..+ .|++++ + .+|+.|+++.+.+.+
T Consensus 539 ~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~ 585 (660)
T 1z7e_A 539 DIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASF 585 (660)
T ss_dssp EHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHH
T ss_pred EHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHh
Confidence 99999999999998764 344 687764 4 699999999998876
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-22 Score=160.43 Aligned_cols=175 Identities=22% Similarity=0.144 Sum_probs=134.3
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHHHcCC--CEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAKKFGV--RRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+|+.... .+.......+...|+.+|++|++++.+.+. ++||+.||. .+|+... +.+.+|+++..+
T Consensus 53 d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~-~vyg~~~---~~~~~E~~p~~~ 128 (298)
T 4b4o_A 53 DAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGV-AYYQPSL---TAEYDEDSPGGD 128 (298)
T ss_dssp SEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEG-GGSCCCS---SCCBCTTCCCSC
T ss_pred CEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeee-eeecCCC---CCcccccCCccc
Confidence 789999986432 122233467889999999999999998854 458888886 7788765 556899988776
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc--cCCcccCceeHH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT--QEHYWLGAVHVK 152 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~ 152 (232)
. +.|+..|...|.... ....+++++++|++.+||++. ..+..++.....+.... .+++.++|||++
T Consensus 129 ~------~~~~~~~~~~e~~~~--~~~~~~~~~~~r~~~v~g~~~----~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~ 196 (298)
T 4b4o_A 129 F------DFFSNLVTKWEAAAR--LPGDSTRQVVVRSGVVLGRGG----GAMGHMLLPFRLGLGGPIGSGHQFFPWIHIG 196 (298)
T ss_dssp S------SHHHHHHHHHHHHHC--CSSSSSEEEEEEECEEECTTS----HHHHHHHHHHHTTCCCCBTTSCSBCCEEEHH
T ss_pred c------chhHHHHHHHHHHHH--hhccCCceeeeeeeeEEcCCC----CchhHHHHHHhcCCcceecccCceeecCcHH
Confidence 6 377777777776532 345689999999999999863 34455555555555444 444789999999
Q ss_pred hHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 153 DVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 153 D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
|+|+++..+++++...|.||++ ++++|+.|+++.+++.+
T Consensus 197 Dva~a~~~~~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~l 236 (298)
T 4b4o_A 197 DLAGILTHALEANHVHGVLNGVAPSSATNAEFAQTFGAAL 236 (298)
T ss_dssp HHHHHHHHHHHCTTCCEEEEESCSCCCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEEEECCCccCHHHHHHHHHHHh
Confidence 9999999999998888888775 67899999999999998
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.5e-23 Score=165.75 Aligned_cols=180 Identities=17% Similarity=0.070 Sum_probs=140.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-----CCEEEEecccceeccCCCCCCCCccCCCCCCCcc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-----VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLD 75 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-----~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~ 75 (232)
|+|||+||.... ....++...+++|+.++.+++++|.+.+ ++++|++||. .+|+... ..+++|+++..+.
T Consensus 88 d~vih~A~~~~~-~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~-~~~~~~~---~~~~~E~~~~~~~ 162 (342)
T 2hrz_A 88 DVIFHLAAIVSG-EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSI-AVFGAPL---PYPIPDEFHTTPL 162 (342)
T ss_dssp SEEEECCCCCHH-HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG-GGCCSSC---CSSBCTTCCCCCS
T ss_pred CEEEECCccCcc-cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCch-HhhCCCC---CCCcCCCCCCCCc
Confidence 799999997541 1123467788999999999999998876 7899999998 6677543 3458999887665
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeC-CCCCCC--CChhHHHHHHHHhCCCCc--c-CCcccCce
Q 026820 76 FCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLG-PFPQPY--VNASGAVLQRLLQGSKDT--Q-EHYWLGAV 149 (232)
Q Consensus 76 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G-~~~~~~--~~~~~~~~~~~~~~~~~~--~-~~~~~~~i 149 (232)
+.|+.+|..+|.++..++++.+++.+++|++.+|| |+.... ...+..++.....+.+.. . ++..++++
T Consensus 163 ------~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T 2hrz_A 163 ------TSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHA 236 (342)
T ss_dssp ------SHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEE
T ss_pred ------chHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeE
Confidence 59999999999999998877789999999999998 543221 123455666677776543 2 23556789
Q ss_pred eHHhHHHHHHHhhcCCC----CCceEEEecCcccHHHHHHHHHhhC
Q 026820 150 HVKDVAKAQVLLFETSA----ASGRYLCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~----~~~~~~~~~~~~s~~el~~~i~~~~ 191 (232)
|++|+|++++.++..+. ..+.|+++++.+++.|+++.+++.+
T Consensus 237 ~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~ 282 (342)
T 2hrz_A 237 SPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVA 282 (342)
T ss_dssp CHHHHHHHHHHHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHH
T ss_pred ehHHHHHHHHHHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHc
Confidence 99999999999997754 2347888777799999999999887
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.89 E-value=9.9e-23 Score=166.44 Aligned_cols=162 Identities=20% Similarity=0.171 Sum_probs=137.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCC-EEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVR-RVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+||.... ..+.+.++.|+.++.+|+++|++.+++ ++|++||. .+|+ .
T Consensus 48 d~Vih~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~-~~~~------------------~---- 100 (369)
T 3st7_A 48 DFIVHLAGVNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSI-QATQ------------------D---- 100 (369)
T ss_dssp SEEEECCCSBCT----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEG-GGGS------------------C----
T ss_pred CEEEECCcCCCC----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCch-hhcC------------------C----
Confidence 799999998764 356778899999999999999999887 99999997 4444 1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC-ChhHHHHHHHHhCCCCcc--CCcccCceeHHhHHH
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV-NASGAVLQRLLQGSKDTQ--EHYWLGAVHVKDVAK 156 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a~ 156 (232)
+.|+.+|..+|+++..++++.+++++++||+.+||+...+.. +.+..++..+..+.++.. ++..++++|++|+|+
T Consensus 101 --~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 178 (369)
T 3st7_A 101 --NPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVA 178 (369)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHH
T ss_pred --CCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHH
Confidence 589999999999999998888999999999999999876543 366677778888877763 457789999999999
Q ss_pred HHHHhhcCCCC--CceEEEe-cCcccHHHHHHHHHhhC
Q 026820 157 AQVLLFETSAA--SGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 157 ~~~~~~~~~~~--~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+++.++..+.. .+.|+++ ++.+|+.|+++.+++.+
T Consensus 179 ~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~ 216 (369)
T 3st7_A 179 EIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFK 216 (369)
T ss_dssp HHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHHHHHH
T ss_pred HHHHHHhCCcccCCceEEeCCCCceeHHHHHHHHHHHh
Confidence 99999988776 4577665 57799999999999876
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.5e-22 Score=160.15 Aligned_cols=171 Identities=22% Similarity=0.175 Sum_probs=131.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||..... ...++ + +++|+.++.+++++|.+.+++++|++||. .+|+..... ..+++|++ .+.
T Consensus 90 D~vih~A~~~~~~-~~~~~-~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~-~~~~~~~~~-~~~~~E~~--~~~----- 157 (330)
T 2pzm_A 90 THVVHSAAAYKDP-DDWAE-D-AATNVQGSINVAKAASKAGVKRLLNFQTA-LCYGRPATV-PIPIDSPT--APF----- 157 (330)
T ss_dssp SEEEECCCCCSCT-TCHHH-H-HHHHTHHHHHHHHHHHHHTCSEEEEEEEG-GGGCSCSSS-SBCTTCCC--CCC-----
T ss_pred CEEEECCccCCCc-cccCh-h-HHHHHHHHHHHHHHHHHcCCCEEEEecCH-HHhCCCccC-CCCcCCCC--CCC-----
Confidence 7999999986542 12222 3 89999999999999999898999999998 667654311 11577776 333
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCc-ccCceeHHhHHH-HH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHY-WLGAVHVKDVAK-AQ 158 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~-~~ 158 (232)
+.|+.+|..+|.+++.+ +++++++||+++|||+.. ...+..++..+..+. ..+++. .++++|++|+|+ ++
T Consensus 158 -~~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dva~~a~ 229 (330)
T 2pzm_A 158 -TSYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLA--IGPIPTFYKRLKAGQ-KCFCSDTVRDFLDMSDFLAIAD 229 (330)
T ss_dssp -SHHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCC--SSHHHHHHHHHHTTC-CCCEESCEECEEEHHHHHHHHH
T ss_pred -ChHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCC--CCHHHHHHHHHHcCC-EEeCCCCEecceeHHHHHHHHH
Confidence 58999999999997764 899999999999999852 235556666666665 333332 689999999999 99
Q ss_pred HHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 159 VLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 159 ~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
+.++..+. ++.|+++ +..+++.|+++.+++.++
T Consensus 230 ~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g 263 (330)
T 2pzm_A 230 LSLQEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVG 263 (330)
T ss_dssp HHTSTTCC-CEEEEESCSCCEEHHHHHHHHHHHHT
T ss_pred HHHhhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhC
Confidence 99998765 4478776 567999999999998873
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.1e-23 Score=174.12 Aligned_cols=175 Identities=14% Similarity=0.088 Sum_probs=131.7
Q ss_pred CeEEEeecCCCC-CCCCCchhhhHHHHHHHHHHHHHH-HHHcCCCEEEEecccceecc-CCCCCCCCccCCCCCCCcccc
Q 026820 1 MGVFHLASPNTL-DDPKDPEKELLIPAVQGTLNVLEA-AKKFGVRRVVLTSSISSIVP-NPNWPQGKVIDETSWTDLDFC 77 (232)
Q Consensus 1 D~Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~-~~~~~~~~~i~~Ss~~~~~~-~~~~~~~~~~~E~~~~~~~~~ 77 (232)
|+|||+||.... ......+..+++.|+.++.+|+++ +++.++++|||+||+ .+|+ ... ..+++|+++. +.
T Consensus 203 D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~-~vyg~~~~---~~~~~E~~~~-~~-- 275 (516)
T 3oh8_A 203 DVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAV-GFYGHDRG---DEILTEESES-GD-- 275 (516)
T ss_dssp SEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEG-GGGCSEEE---EEEECTTSCC-CS--
T ss_pred CEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcc-eEecCCCC---CCccCCCCCC-Cc--
Confidence 799999998654 223445678899999999999999 555688999999997 6787 332 4568888876 33
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCcc--CCcccCceeHHhHH
Q 026820 78 KSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQ--EHYWLGAVHVKDVA 155 (232)
Q Consensus 78 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~a 155 (232)
+.|+.+|...|.++.. .+..|++++|+||+.+||+.. +.+..++..+..+..... +++.++++|++|+|
T Consensus 276 ----~~y~~~~~~~E~~~~~-~~~~gi~~~ilRp~~v~Gp~~----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva 346 (516)
T 3oh8_A 276 ----DFLAEVCRDWEHATAP-ASDAGKRVAFIRTGVALSGRG----GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLT 346 (516)
T ss_dssp ----SHHHHHHHHHHHTTHH-HHHTTCEEEEEEECEEEBTTB----SHHHHHHHTTC---CCCCTTSCCEECEEEHHHHH
T ss_pred ----ChHHHHHHHHHHHHHH-HHhCCCCEEEEEeeEEECCCC----ChHHHHHHHHHhCCCcccCCCCceEceEeHHHHH
Confidence 5899999999988765 456799999999999999873 344444444444443333 44778999999999
Q ss_pred HHHHHhhcCCCCCceEEE-ecCcccHHHHHHHHHhhC
Q 026820 156 KAQVLLFETSAASGRYLC-TNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~ 191 (232)
++++.++.++...+.|++ +++.+|+.|+++.+++.+
T Consensus 347 ~ai~~~l~~~~~~g~~ni~~~~~~s~~el~~~i~~~~ 383 (516)
T 3oh8_A 347 DIYYRAIVDAQISGPINAVAPNPVSNADMTKILATSM 383 (516)
T ss_dssp HHHHHHHHCTTCCEEEEESCSCCEEHHHHHHHTTC--
T ss_pred HHHHHHHhCcccCCcEEEECCCCCCHHHHHHHHHHHh
Confidence 999999988877777766 567899999999999887
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=157.56 Aligned_cols=168 Identities=23% Similarity=0.187 Sum_probs=130.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceecc----CCCCCCCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVP----NPNWPQGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~----~~~~~~~~~~~E~~~~~~~~ 76 (232)
|+|||+||..... ...++ + +++|+.++.+++++|.+.+++++|++||. .+|+ ... . +++|++ .|.
T Consensus 91 D~vih~A~~~~~~-~~~~~-~-~~~N~~~~~~l~~a~~~~~~~~iV~~SS~-~~~g~~~~~~~---~-~~~E~~--~p~- 159 (333)
T 2q1w_A 91 DAVVHTAASYKDP-DDWYN-D-TLTNCVGGSNVVQAAKKNNVGRFVYFQTA-LCYGVKPIQQP---V-RLDHPR--NPA- 159 (333)
T ss_dssp SEEEECCCCCSCT-TCHHH-H-HHHHTHHHHHHHHHHHHTTCSEEEEEEEG-GGGCSCCCSSS---B-CTTSCC--CCT-
T ss_pred cEEEECceecCCC-ccCCh-H-HHHHHHHHHHHHHHHHHhCCCEEEEECcH-HHhCCCcccCC---C-CcCCCC--CCC-
Confidence 7999999986542 11222 3 89999999999999999998999999997 6676 322 2 577776 222
Q ss_pred ccccchhHHHHHHHHHHHHHH-HHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCcc-CCcccCceeHHhH
Q 026820 77 CKSHKIWYSMSKTLAEKAAWE-FAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQ-EHYWLGAVHVKDV 154 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~-~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~ 154 (232)
.+.|+.+|..+|.++.. +. +++++||+.+||+... ...+..++..+..+. ..+ ++..++++|++|+
T Consensus 160 ----~~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~Dv 227 (333)
T 2q1w_A 160 ----NSSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGK-KCFVTKARRDFVFVKDL 227 (333)
T ss_dssp ----TCHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC--SSHHHHHHHHHHTTC-CCEEEECEECEEEHHHH
T ss_pred ----CCchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc--CcHHHHHHHHHHcCC-eeeCCCceEeeEEHHHH
Confidence 14899999999999876 43 8999999999999832 235566677766665 333 3567899999999
Q ss_pred HHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhCC
Q 026820 155 AKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 155 a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~p 192 (232)
|++++.++..+. ++.|+++ +..+++.|+++.+++.++
T Consensus 228 a~ai~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g 265 (333)
T 2q1w_A 228 ARATVRAVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMA 265 (333)
T ss_dssp HHHHHHHHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhC
Confidence 999999998766 4478775 577999999999999983
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=8.2e-22 Score=173.31 Aligned_cols=184 Identities=16% Similarity=0.139 Sum_probs=134.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCC-CCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNW-PQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~-~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+||..........+.+.+++|+.++.+++++|++.+++++|++||. .+|+.... ....+++|+.+..+.
T Consensus 86 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~-~vyg~~~~~~~~~~~~E~~~~~p~---- 160 (699)
T 1z45_A 86 DSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSA-TVYGDATRFPNMIPIPEECPLGPT---- 160 (699)
T ss_dssp CEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEG-GGGCCGGGSTTCCSBCTTSCCCCC----
T ss_pred CEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcH-HHhCCCccccccCCccccCCCCCC----
Confidence 799999998653111223567899999999999999999899999999997 66765321 112457888766655
Q ss_pred cchhHHHHHHHHHHHHHHHHHH--cCCcEEEEcCCCeeCCCCCCC--------CChhHHHHHHHHhC--CCCc-cC----
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEK--NGTDVVAIHPATSLGPFPQPY--------VNASGAVLQRLLQG--SKDT-QE---- 142 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~--~~~~~~ilR~~~i~G~~~~~~--------~~~~~~~~~~~~~~--~~~~-~~---- 142 (232)
+.|+.+|..+|+++..++++ .+++++|+||+.+||+..... ...+..++.+...+ .++. ++
T Consensus 161 --~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 238 (699)
T 1z45_A 161 --NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYD 238 (699)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC-----
T ss_pred --ChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCccc
Confidence 59999999999999998776 699999999999999853210 11233344444443 2333 33
Q ss_pred ----CcccCceeHHhHHHHHHHhhcCC------CC-CceEEE-ecCcccHHHHHHHHHhhC
Q 026820 143 ----HYWLGAVHVKDVAKAQVLLFETS------AA-SGRYLC-TNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 143 ----~~~~~~i~v~D~a~~~~~~~~~~------~~-~~~~~~-~~~~~s~~el~~~i~~~~ 191 (232)
+..++|+|++|+|++++.++... .. .+.|++ +++.+++.|+++.+++.+
T Consensus 239 ~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~ 299 (699)
T 1z45_A 239 SRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKAS 299 (699)
T ss_dssp -CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred CCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHh
Confidence 36789999999999999988642 11 236877 467799999999999987
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.6e-22 Score=150.54 Aligned_cols=156 Identities=17% Similarity=0.100 Sum_probs=114.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||... ...+.++.|+.++.+++++|++.+++++|++||.+++++... ...|+.+..|.
T Consensus 69 d~vi~~a~~~~------~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~-----~~~~~~~~~p~----- 132 (227)
T 3dhn_A 69 DAVISAFNPGW------NNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPG-----LRLMDSGEVPE----- 132 (227)
T ss_dssp SEEEECCCC------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETT-----EEGGGTTCSCG-----
T ss_pred CEEEEeCcCCC------CChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCC-----CccccCCcchH-----
Confidence 79999998753 233488999999999999999999999999999866555432 13445555554
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVL 160 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 160 (232)
+.|+.+|..+|.+++.+.++.+++++++||+.+||+........ ..+.........++++|++|+|++++.
T Consensus 133 -~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~Dva~ai~~ 203 (227)
T 3dhn_A 133 -NILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR--------LGKDDMIVDIVGNSHISVEDYAAAMID 203 (227)
T ss_dssp -GGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE--------EESSBCCCCTTSCCEEEHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCcccccee--------ecCCCcccCCCCCcEEeHHHHHHHHHH
Confidence 58999999999998888777899999999999999976543211 112222222233899999999999999
Q ss_pred hhcCCCCCc-eEEE-ecCcccHH
Q 026820 161 LFETSAASG-RYLC-TNGIYQFA 181 (232)
Q Consensus 161 ~~~~~~~~~-~~~~-~~~~~s~~ 181 (232)
++.++...| +|++ ++++.++.
T Consensus 204 ~l~~~~~~g~~~~~~~~~~~~~~ 226 (227)
T 3dhn_A 204 ELEHPKHHQERFTIGYLEHHHHH 226 (227)
T ss_dssp HHHSCCCCSEEEEEECCSCCC--
T ss_pred HHhCccccCcEEEEEeehhcccC
Confidence 999998777 6755 56777764
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-20 Score=153.40 Aligned_cols=175 Identities=14% Similarity=0.097 Sum_probs=132.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEE-------EecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVV-------LTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i-------~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||... .++.+.++.|+.++.+++++|.+. +++++| |+||. .+||..... ..+++|+++
T Consensus 74 d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~-~vyg~~~~~-~~~~~E~~~ 146 (364)
T 2v6g_A 74 THVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPF-ESYGKIESH-DPPYTEDLP 146 (364)
T ss_dssp CEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCG-GGTTTSCCC-CSSBCTTSC
T ss_pred CEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEech-hhccccccC-CCCCCcccc
Confidence 79999999863 357889999999999999999998 789998 79987 668764211 356888887
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHcC-CcEEEEcCCCeeCCCCCCCCCh-hHHH-HHHH--HhCCCCc-cCC--
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNG-TDVVAIHPATSLGPFPQPYVNA-SGAV-LQRL--LQGSKDT-QEH-- 143 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~~ilR~~~i~G~~~~~~~~~-~~~~-~~~~--~~~~~~~-~~~-- 143 (232)
..+.. +.| ..+|+++..++++.+ ++++++||+.+||+........ ...+ +..+ ..+.++. .++
T Consensus 147 ~~~~~-----~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 217 (364)
T 2v6g_A 147 RLKYM-----NFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKA 217 (364)
T ss_dssp CCSSC-----CHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHH
T ss_pred CCccc-----hhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcc
Confidence 65522 467 458999988876666 9999999999999987542232 2232 3333 2566655 444
Q ss_pred ---cccCceeHHhHHHHHHHhhcCCCCCc-eEEEe-cCcccHHHHHHHHHhhC
Q 026820 144 ---YWLGAVHVKDVAKAQVLLFETSAASG-RYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 144 ---~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
...+++|++|+|++++.++.++...| .|+++ ++.+|+.|+++.+++.+
T Consensus 218 ~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~ 270 (364)
T 2v6g_A 218 AWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQF 270 (364)
T ss_dssp HHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHH
T ss_pred cccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHh
Confidence 23678899999999999998775455 78776 56799999999999987
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.7e-22 Score=154.21 Aligned_cols=166 Identities=16% Similarity=0.148 Sum_probs=130.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.........++...++.|+.++.+++++|.+.+. ++|++||. .+|+... .+++|+++..+.
T Consensus 59 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~-~~~~~~~----~~~~e~~~~~~~----- 127 (273)
T 2ggs_A 59 DVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTD-YVFDGEK----GNYKEEDIPNPI----- 127 (273)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEG-GGSCSSS----CSBCTTSCCCCS-----
T ss_pred CEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecc-eeEcCCC----CCcCCCCCCCCC-----
Confidence 799999998653111235678899999999999999999886 89999998 5565432 257888876665
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~ 159 (232)
+.|+.+|..+|.+++. ++++++||+.+||+ ......++..+..+.+.. .++ .++++|++|+|++++
T Consensus 128 -~~Y~~sK~~~e~~~~~------~~~~~iR~~~v~G~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~ 194 (273)
T 2ggs_A 128 -NYYGLSKLLGETFALQ------DDSLIIRTSGIFRN-----KGFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAIL 194 (273)
T ss_dssp -SHHHHHHHHHHHHHCC------TTCEEEEECCCBSS-----SSHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHhC------CCeEEEeccccccc-----cHHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHH
Confidence 5999999999999754 67899999999982 134444455556666554 555 779999999999999
Q ss_pred HhhcCCCCCceEEEecCcccHHHHHHHHHhhC
Q 026820 160 LLFETSAASGRYLCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~ 191 (232)
.++.++. .+.|+++++.+|+.|+++.+++.+
T Consensus 195 ~~~~~~~-~g~~~i~~~~~s~~e~~~~~~~~~ 225 (273)
T 2ggs_A 195 ELLELRK-TGIIHVAGERISRFELALKIKEKF 225 (273)
T ss_dssp HHHHHTC-CEEEECCCCCEEHHHHHHHHHHHT
T ss_pred HHHhcCc-CCeEEECCCcccHHHHHHHHHHHh
Confidence 9997764 567877667799999999999998
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=158.71 Aligned_cols=163 Identities=10% Similarity=0.009 Sum_probs=129.7
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||..........+.+.+++|+.++.+++++|.+.+++++|++||..++. |.
T Consensus 93 D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~------------------p~----- 149 (344)
T 2gn4_A 93 DICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN------------------PI----- 149 (344)
T ss_dssp SEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS------------------CC-----
T ss_pred CEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC------------------Cc-----
Confidence 7999999986531122346789999999999999999999999999999963311 11
Q ss_pred chhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCC-CCc--cCCcccCceeHHhH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGS-KDT--QEHYWLGAVHVKDV 154 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~i~v~D~ 154 (232)
+.|+.+|..+|.++..+.+. .+++++++||+++||+.. ..+..++..+..|. ++. .++..++|+|++|+
T Consensus 150 -~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~----~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~ 224 (344)
T 2gn4_A 150 -NLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG----SVVPFFKKLVQNKASEIPITDIRMTRFWITLDEG 224 (344)
T ss_dssp -SHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT----SHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHH
T ss_pred -cHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC----CHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHH
Confidence 48999999999999987643 579999999999999863 35566677777777 554 34467799999999
Q ss_pred HHHHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhC
Q 026820 155 AKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 155 a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~ 191 (232)
|++++.++.+...+..|++++..+++.|+++.+.+.+
T Consensus 225 a~~v~~~l~~~~~g~~~~~~~~~~s~~el~~~i~~~~ 261 (344)
T 2gn4_A 225 VSFVLKSLKRMHGGEIFVPKIPSMKMTDLAKALAPNT 261 (344)
T ss_dssp HHHHHHHHHHCCSSCEEEECCCEEEHHHHHHHHCTTC
T ss_pred HHHHHHHHhhccCCCEEecCCCcEEHHHHHHHHHHhC
Confidence 9999999987643347888777799999999998765
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=139.19 Aligned_cols=149 Identities=17% Similarity=0.239 Sum_probs=115.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||... ...+...+++|+.++.+++++|++.+++++|++||.+.. . .|..+ .+
T Consensus 86 D~vi~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~----~-------~~~~~-~~------ 143 (236)
T 3e8x_A 86 DAVVFAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTV----D-------PDQGP-MN------ 143 (236)
T ss_dssp SEEEECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCS----C-------GGGSC-GG------
T ss_pred CEEEECCCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCC----C-------CCCCh-hh------
Confidence 79999999865 356888999999999999999999999999999996331 1 11111 12
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVL 160 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 160 (232)
.+.|+.+|..+|.+++ +.+++++++||+.++|+........ ...++..++++|++|+|++++.
T Consensus 144 ~~~Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~~~~~-------------~~~~~~~~~~i~~~Dva~~~~~ 206 (236)
T 3e8x_A 144 MRHYLVAKRLADDELK----RSSLDYTIVRPGPLSNEESTGKVTV-------------SPHFSEITRSITRHDVAKVIAE 206 (236)
T ss_dssp GHHHHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCSEEEE-------------ESSCSCCCCCEEHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCCeEEe-------------ccCCCcccCcEeHHHHHHHHHH
Confidence 2689999999999865 5699999999999999864321110 0022346799999999999999
Q ss_pred hhcCCCCCc-eEEEecCcccHHHHHHHHH
Q 026820 161 LFETSAASG-RYLCTNGIYQFAEFAEKVS 188 (232)
Q Consensus 161 ~~~~~~~~~-~~~~~~~~~s~~el~~~i~ 188 (232)
++.++...| .|++.+...++.|+++.++
T Consensus 207 ~~~~~~~~g~~~~v~~~~~~~~e~~~~i~ 235 (236)
T 3e8x_A 207 LVDQQHTIGKTFEVLNGDTPIAKVVEQLG 235 (236)
T ss_dssp HTTCGGGTTEEEEEEECSEEHHHHHHTC-
T ss_pred HhcCccccCCeEEEeCCCcCHHHHHHHhc
Confidence 998876666 6877666799999998765
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.4e-20 Score=142.36 Aligned_cols=155 Identities=18% Similarity=0.205 Sum_probs=121.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||... ..+....++.|+.++.+++++|.+.+++++|++||. .+|+.... ..+++|+++..+.
T Consensus 65 d~vi~~a~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~-~~~~~~~~--~~~~~E~~~~~~~----- 132 (267)
T 3ay3_A 65 DGIIHLGGVSV----ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSN-HTIGYYPR--TTRIDTEVPRRPD----- 132 (267)
T ss_dssp SEEEECCSCCS----CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEG-GGSTTSBT--TSCBCTTSCCCCC-----
T ss_pred CEEEECCcCCC----CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCH-HHhCCCCC--CCCCCCCCCCCCC-----
Confidence 79999999863 345678899999999999999999999999999997 55654321 3468898877665
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVL 160 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 160 (232)
+.|+.+|..+|.++..+.++.+++++++||+.+|+... .++..++++|++|+|+++..
T Consensus 133 -~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~---------------------~~~~~~~~~~~~dva~~~~~ 190 (267)
T 3ay3_A 133 -SLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK---------------------DARMMATWLSVDDFMRLMKR 190 (267)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC---------------------SHHHHHHBCCHHHHHHHHHH
T ss_pred -ChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC---------------------CCCeeeccccHHHHHHHHHH
Confidence 59999999999999988877899999999999985311 01124579999999999999
Q ss_pred hhcCCCCCc-eEEE-ecCcccHHHHHHHHHhhC
Q 026820 161 LFETSAASG-RYLC-TNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 161 ~~~~~~~~~-~~~~-~~~~~s~~el~~~i~~~~ 191 (232)
++..+.... .++. ++...++.++.+. +.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~l 221 (267)
T 3ay3_A 191 AFVAPKLGCTVVYGASANTESWWDNDKS--AFL 221 (267)
T ss_dssp HHHSSCCCEEEEEECCSCSSCCBCCGGG--GGG
T ss_pred HHhCCCCCceeEecCCCccccccCHHHH--HHc
Confidence 998775533 5554 4555677777666 555
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.2e-20 Score=140.88 Aligned_cols=147 Identities=20% Similarity=0.164 Sum_probs=114.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||... ...++.|+.++.+++++|++.+++++|++||.++ ++.. +.+| .+. .+
T Consensus 65 d~vi~~ag~~~--------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~-~~~~------~~~e-~~~------~~ 122 (219)
T 3dqp_A 65 DAIINVSGSGG--------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS-LQPE------KWIG-AGF------DA 122 (219)
T ss_dssp SEEEECCCCTT--------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTT-TCGG------GCCS-HHH------HH
T ss_pred CEEEECCcCCC--------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccc-cCCC------cccc-ccc------cc
Confidence 79999999854 3378899999999999999999999999999733 3221 2344 222 22
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVL 160 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 160 (232)
.+.|+.+|..+|++++ +..+++++++||+.+||+...+.. ..++..+++++++|+|++++.
T Consensus 123 ~~~Y~~sK~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~~----------------~~~~~~~~~i~~~Dva~~i~~ 183 (219)
T 3dqp_A 123 LKDYYIAKHFADLYLT---KETNLDYTIIQPGALTEEEATGLI----------------DINDEVSASNTIGDVADTIKE 183 (219)
T ss_dssp THHHHHHHHHHHHHHH---HSCCCEEEEEEECSEECSCCCSEE----------------EESSSCCCCEEHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH---hccCCcEEEEeCceEecCCCCCcc----------------ccCCCcCCcccHHHHHHHHHH
Confidence 3689999999999976 466999999999999998643321 123567899999999999999
Q ss_pred hhcCCCCCc-eEEEecCcccHHHHHHHHH
Q 026820 161 LFETSAASG-RYLCTNGIYQFAEFAEKVS 188 (232)
Q Consensus 161 ~~~~~~~~~-~~~~~~~~~s~~el~~~i~ 188 (232)
++.++...+ .|++++...+++|+.+.-.
T Consensus 184 ~l~~~~~~g~~~~i~~g~~~~~e~~~~~~ 212 (219)
T 3dqp_A 184 LVMTDHSIGKVISMHNGKTAIKEALESLL 212 (219)
T ss_dssp HHTCGGGTTEEEEEEECSEEHHHHHHTTT
T ss_pred HHhCccccCcEEEeCCCCccHHHHHHHHH
Confidence 998876656 6888766799999987543
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.6e-19 Score=139.90 Aligned_cols=150 Identities=17% Similarity=0.161 Sum_probs=120.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||... ..+.+..+++|+.++.+++++|++.+++++|++||. .+|+.... ..+++|+.+..+.
T Consensus 66 D~vi~~Ag~~~----~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~-~~~g~~~~--~~~~~e~~~~~~~----- 133 (267)
T 3rft_A 66 DGIVHLGGISV----EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSN-HTIGYYPQ--TERLGPDVPARPD----- 133 (267)
T ss_dssp SEEEECCSCCS----CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEG-GGGTTSBT--TSCBCTTSCCCCC-----
T ss_pred CEEEECCCCcC----cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcch-HHhCCCCC--CCCCCCCCCCCCC-----
Confidence 79999999954 456789999999999999999999998999999998 44553222 4568888877666
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVL 160 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 160 (232)
+.|+.||..+|.+++.++++.+++++++||+.++|+... ++..++++|++|+++++..
T Consensus 134 -~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~---------------------~~~~~~~~~~~d~a~~~~~ 191 (267)
T 3rft_A 134 -GLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNN---------------------YRMLSTWFSHDDFVSLIEA 191 (267)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCS---------------------TTHHHHBCCHHHHHHHHHH
T ss_pred -ChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCC---------------------CCceeeEEcHHHHHHHHHH
Confidence 599999999999999998888999999999999987322 1234478999999999999
Q ss_pred hhcCCCCCc-e-EEEecCcccHHHHH
Q 026820 161 LFETSAASG-R-YLCTNGIYQFAEFA 184 (232)
Q Consensus 161 ~~~~~~~~~-~-~~~~~~~~s~~el~ 184 (232)
++..+...+ . |+++++..++.++.
T Consensus 192 ~~~~~~~~~~~~~~~s~~~~~~~~~~ 217 (267)
T 3rft_A 192 VFRAPVLGCPVVWGASANDAGWWDNS 217 (267)
T ss_dssp HHHCSCCCSCEEEECCCCTTCCBCCG
T ss_pred HHhCCCCCceEEEEeCCCCCCcccCh
Confidence 998876654 3 56666666665553
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.2e-19 Score=134.04 Aligned_cols=155 Identities=10% Similarity=-0.023 Sum_probs=109.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.... ......|+.++++++++|++.+ +++|++||++++|+..... ..+.+|...+.+.
T Consensus 64 d~vi~~ag~~~~-------~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~-~~~~~~~~~~~~~----- 129 (224)
T 3h2s_A 64 DAVVDALSVPWG-------SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADH-PMILDFPESAASQ----- 129 (224)
T ss_dssp SEEEECCCCCTT-------SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSS-CGGGGCCGGGGGS-----
T ss_pred CEEEECCccCCC-------cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCc-cccccCCCCCccc-----
Confidence 799999998621 1235789999999999999999 8999999987766654421 1234454433333
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVL 160 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 160 (232)
+.|+.+|..+|.+ ..+.++.+++++++||+.+||+...... . ........++..++++|++|+|++++.
T Consensus 130 -~~y~~sK~~~e~~-~~~~~~~~i~~~ivrp~~v~g~~~~~~~--~-------~~~~~~~~~~~~~~~i~~~DvA~~~~~ 198 (224)
T 3h2s_A 130 -PWYDGALYQYYEY-QFLQMNANVNWIGISPSEAFPSGPATSY--V-------AGKDTLLVGEDGQSHITTGNMALAILD 198 (224)
T ss_dssp -TTHHHHHHHHHHH-HHHTTCTTSCEEEEEECSBCCCCCCCCE--E-------EESSBCCCCTTSCCBCCHHHHHHHHHH
T ss_pred -hhhHHHHHHHHHH-HHHHhcCCCcEEEEcCccccCCCcccCc--e-------ecccccccCCCCCceEeHHHHHHHHHH
Confidence 5899999999954 4445567999999999999998543221 0 112222244566799999999999999
Q ss_pred hhcCCCCCc-eEEEec-CcccH
Q 026820 161 LFETSAASG-RYLCTN-GIYQF 180 (232)
Q Consensus 161 ~~~~~~~~~-~~~~~~-~~~s~ 180 (232)
++.++...+ +|++.+ +..++
T Consensus 199 ~l~~~~~~g~~~~~~~~~~~~~ 220 (224)
T 3h2s_A 199 QLEHPTAIRDRIVVRDADLEHH 220 (224)
T ss_dssp HHHSCCCTTSEEEEEECC----
T ss_pred HhcCccccCCEEEEecCcchhc
Confidence 999987766 686665 33443
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=137.07 Aligned_cols=152 Identities=16% Similarity=0.155 Sum_probs=113.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+.. . . ...|+.++.+++++|++.+++++|++||.++ |.. +
T Consensus 68 d~vi~~a~~~-~----~-----~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~-~~~----------------~------ 114 (287)
T 2jl1_A 68 SKLLFISGPH-Y----D-----NTLLIVQHANVVKAARDAGVKHIAYTGYAFA-EES----------------I------ 114 (287)
T ss_dssp SEEEECCCCC-S----C-----HHHHHHHHHHHHHHHHHTTCSEEEEEEETTG-GGC----------------C------
T ss_pred CEEEEcCCCC-c----C-----chHHHHHHHHHHHHHHHcCCCEEEEECCCCC-CCC----------------C------
Confidence 7999999862 1 1 1679999999999999999999999999743 310 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~ 159 (232)
.+|+.+|..+|+++. +.+++++++||+.++|+... ..+... +..+.... .++..++++|++|+|++++
T Consensus 115 -~~y~~~K~~~E~~~~----~~~~~~~ilrp~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 183 (287)
T 2jl1_A 115 -IPLAHVHLATEYAIR----TTNIPYTFLRNALYTDFFVN---EGLRAS---TESGAIVTNAGSGIVNSVTRNELALAAA 183 (287)
T ss_dssp -STHHHHHHHHHHHHH----HTTCCEEEEEECCBHHHHSS---GGGHHH---HHHTEEEESCTTCCBCCBCHHHHHHHHH
T ss_pred -CchHHHHHHHHHHHH----HcCCCeEEEECCEeccccch---hhHHHH---hhCCceeccCCCCccCccCHHHHHHHHH
Confidence 279999999999975 35899999999988875311 122221 12233222 4567889999999999999
Q ss_pred HhhcCCCCCc-eEEEec-CcccHHHHHHHHHhhCCCCCCc
Q 026820 160 LLFETSAASG-RYLCTN-GIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 160 ~~~~~~~~~~-~~~~~~-~~~s~~el~~~i~~~~p~~~~~ 197 (232)
.++.++...| .|++++ +.+|+.|+++.+++.+ +.+++
T Consensus 184 ~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~-g~~~~ 222 (287)
T 2jl1_A 184 TVLTEEGHENKTYNLVSNQPWTFDELAQILSEVS-GKKVV 222 (287)
T ss_dssp HHHTSSSCTTEEEEECCSSCBCHHHHHHHHHHHH-SSCCE
T ss_pred HHhcCCCCCCcEEEecCCCcCCHHHHHHHHHHHH-CCcce
Confidence 9998765555 687764 5799999999999998 44443
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.3e-18 Score=130.48 Aligned_cols=154 Identities=10% Similarity=-0.001 Sum_probs=91.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.... ....|+.++++++++|++.+++++|++||.+++|+... ..+..|+.+..+.
T Consensus 63 d~vi~~ag~~~~---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~---~~~~~~~~~~~~~----- 125 (221)
T 3ew7_A 63 NVVVDAYGISPD---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDED---GNTLLESKGLREA----- 125 (221)
T ss_dssp SEEEECCCSSTT---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC----------------------C-----
T ss_pred CEEEECCcCCcc---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCC---CccccccCCCCCH-----
Confidence 799999998432 25569999999999999998899999999877776554 2235666555554
Q ss_pred chhHHHHHHHHHHHHHHHHH-HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAE-KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~-~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~ 159 (232)
+.|+.+|...|.+ ..+.+ ..+++++++||+.+||+..... . +. ..+..........++++++|+|++++
T Consensus 126 -~~y~~~k~~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~--~---~~---~~~~~~~~~~~~~~~i~~~Dva~~~~ 195 (221)
T 3ew7_A 126 -PYYPTARAQAKQL-EHLKSHQAEFSWTYISPSAMFEPGERTG--D---YQ---IGKDHLLFGSDGNSFISMEDYAIAVL 195 (221)
T ss_dssp -CCSCCHHHHHHHH-HHHHTTTTTSCEEEEECSSCCCCC-----------------------------CCCHHHHHHHHH
T ss_pred -HHHHHHHHHHHHH-HHHHhhccCccEEEEeCcceecCCCccC--c---eE---eccccceecCCCCceEeHHHHHHHHH
Confidence 4799999999987 33333 6799999999999999843211 1 10 11122222222347999999999999
Q ss_pred HhhcCCCCCc-eEEEec-CcccHH
Q 026820 160 LLFETSAASG-RYLCTN-GIYQFA 181 (232)
Q Consensus 160 ~~~~~~~~~~-~~~~~~-~~~s~~ 181 (232)
.++.++...+ +|++.+ .+.+..
T Consensus 196 ~~l~~~~~~g~~~~~~~~~~~~~~ 219 (221)
T 3ew7_A 196 DEIERPNHLNEHFTVAGKLEHHHH 219 (221)
T ss_dssp HHHHSCSCTTSEEECCC-------
T ss_pred HHHhCccccCCEEEECCCCccccc
Confidence 9999988767 687654 444443
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=3.6e-18 Score=128.97 Aligned_cols=143 Identities=17% Similarity=0.145 Sum_probs=104.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.... ...+.+..++.|+.++.+++++|.+.+++++|++||. .+|+.+ .
T Consensus 67 d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~-~~~~~~----------------~----- 122 (215)
T 2a35_A 67 DTAFCCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSAL-GADAKS----------------S----- 122 (215)
T ss_dssp SEEEECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCT-TCCTTC----------------S-----
T ss_pred cEEEECeeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCc-ccCCCC----------------c-----
Confidence 799999997542 1245678899999999999999999999999999997 434321 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCc-EEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTD-VVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~-~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~ 159 (232)
+.|+.+|..+|++++. .+++ ++++||+.+||+..... .. ..+. +.....++..++++|++|+|++++
T Consensus 123 -~~y~~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~~--~~----~~~~-~~~~~~~~~~~~~i~~~Dva~~~~ 190 (215)
T 2a35_A 123 -IFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFR--LA----EILA-APIARILPGKYHGIEACDLARALW 190 (215)
T ss_dssp -SHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEE--GG----GGTT-CCCC----CHHHHHHHHHHHHHHH
T ss_pred -cHHHHHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcch--HH----HHHH-HhhhhccCCCcCcEeHHHHHHHHH
Confidence 4899999999999654 4899 99999999999875421 11 1111 111223334678999999999999
Q ss_pred HhhcCCCCCceEEEec-CcccH
Q 026820 160 LLFETSAASGRYLCTN-GIYQF 180 (232)
Q Consensus 160 ~~~~~~~~~~~~~~~~-~~~s~ 180 (232)
.++.++. .+.|++++ +.+++
T Consensus 191 ~~~~~~~-~~~~~i~~~~~~~~ 211 (215)
T 2a35_A 191 RLALEEG-KGVRFVESDELRKL 211 (215)
T ss_dssp HHHTCCC-SEEEEEEHHHHHHH
T ss_pred HHHhcCC-CCceEEcHHHHHHh
Confidence 9998775 55787764 44444
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-17 Score=131.77 Aligned_cols=147 Identities=15% Similarity=0.114 Sum_probs=106.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+... ..|+.++++++++|++.+++++|++||.++ |. .+
T Consensus 67 d~vi~~a~~~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~-~~----------------~~------ 111 (286)
T 2zcu_A 67 EKLLLISSSEV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHA-DT----------------SP------ 111 (286)
T ss_dssp SEEEECC--------------------CHHHHHHHHHHHHTCCEEEEEEETTT-TT----------------CC------
T ss_pred CEEEEeCCCCc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCC-CC----------------Cc------
Confidence 78999998621 147899999999999999999999999733 31 01
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc--cCCcccCceeHHhHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT--QEHYWLGAVHVKDVAKAQ 158 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~ 158 (232)
..|+.+|..+|+++.+ .+++++++||+.++++.. .++.+...++... .++..++++|++|+|+++
T Consensus 112 -~~y~~sK~~~e~~~~~----~~~~~~ilrp~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~ 178 (286)
T 2zcu_A 112 -LGLADEHIETEKMLAD----SGIVYTLLRNGWYSENYL--------ASAPAALEHGVFIGAAGDGKIASATRADYAAAA 178 (286)
T ss_dssp -STTHHHHHHHHHHHHH----HCSEEEEEEECCBHHHHH--------TTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHH
T ss_pred -chhHHHHHHHHHHHHH----cCCCeEEEeChHHhhhhH--------HHhHHhhcCCceeccCCCCccccccHHHHHHHH
Confidence 3799999999999754 489999999987665321 1122333333333 345778999999999999
Q ss_pred HHhhcCCCCCc-eEEEec-CcccHHHHHHHHHhhCCCCCC
Q 026820 159 VLLFETSAASG-RYLCTN-GIYQFAEFAEKVSKLFPEYPI 196 (232)
Q Consensus 159 ~~~~~~~~~~~-~~~~~~-~~~s~~el~~~i~~~~p~~~~ 196 (232)
+.++.++...+ .|++++ +.+|+.|+++.+++.+ +.++
T Consensus 179 ~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~-g~~~ 217 (286)
T 2zcu_A 179 ARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQS-GKQV 217 (286)
T ss_dssp HHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHHH-SSCC
T ss_pred HHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHHH-CCCC
Confidence 99998765455 687765 5799999999999998 4443
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-17 Score=128.68 Aligned_cols=162 Identities=17% Similarity=0.032 Sum_probs=111.9
Q ss_pred CeEEEeecCCCCCC------C-------CCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccC
Q 026820 1 MGVFHLASPNTLDD------P-------KDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~~~------~-------~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~ 67 (232)
|+|||+||...... . .......++.|+.++.+++++|++.+++++|++||.++ + .
T Consensus 71 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~-~-----------~ 138 (253)
T 1xq6_A 71 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGG-T-----------N 138 (253)
T ss_dssp SEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTT-T-----------C
T ss_pred CEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccC-C-----------C
Confidence 79999999764200 0 01112467999999999999999989899999999743 2 1
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 68 ETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 68 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
+..+..+. ..+.|+.+|..+|.+++ ..+++++++||+.+||+..... ... .+..........+
T Consensus 139 ~~~~~~~~----~~~~y~~sK~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~-~~~--------~~~~~~~~~~~~~ 201 (253)
T 1xq6_A 139 PDHPLNKL----GNGNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVR-ELL--------VGKDDELLQTDTK 201 (253)
T ss_dssp TTCGGGGG----GGCCHHHHHHHHHHHHH----TSSSCEEEEEECEEECSCSSSS-CEE--------EESTTGGGGSSCC
T ss_pred CCCccccc----cchhHHHHHHHHHHHHH----hCCCceEEEecceeecCCcchh-hhh--------ccCCcCCcCCCCc
Confidence 11111111 01358899999999864 3689999999999999864321 111 1111111112457
Q ss_pred ceeHHhHHHHHHHhhcCCCCCc-eEEEec----CcccHHHHHHHHHhhC
Q 026820 148 AVHVKDVAKAQVLLFETSAASG-RYLCTN----GIYQFAEFAEKVSKLF 191 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~~~~~-~~~~~~----~~~s~~el~~~i~~~~ 191 (232)
++|++|+|++++.++.++...+ .|++++ +.+++.|+++.+++.+
T Consensus 202 ~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~ 250 (253)
T 1xq6_A 202 TVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVT 250 (253)
T ss_dssp EEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCC
T ss_pred EEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHh
Confidence 9999999999999998766555 576654 2599999999999887
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=7.4e-17 Score=130.47 Aligned_cols=155 Identities=11% Similarity=-0.011 Sum_probs=112.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CCEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+|+. .|+.++.+|+++|++.| +++||+ |+ ||. ..+|+.+..+.
T Consensus 85 d~Vi~~a~~---------------~n~~~~~~l~~aa~~~g~v~~~v~-S~----~g~-------~~~e~~~~~p~---- 133 (346)
T 3i6i_A 85 DIVVSTVGG---------------ESILDQIALVKAMKAVGTIKRFLP-SE----FGH-------DVNRADPVEPG---- 133 (346)
T ss_dssp CEEEECCCG---------------GGGGGHHHHHHHHHHHCCCSEEEC-SC----CSS-------CTTTCCCCTTH----
T ss_pred CEEEECCch---------------hhHHHHHHHHHHHHHcCCceEEee-cc----cCC-------CCCccCcCCCc----
Confidence 799999987 28888999999999998 999986 43 221 14555555554
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-c--CCcccCceeHHhHHH
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-Q--EHYWLGAVHVKDVAK 156 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~ 156 (232)
+.|+.+|..+|+++++ .+++++++||+.++|....... ........++... + ++..++++|++|+|+
T Consensus 134 --~~y~~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~~----~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~ 203 (346)
T 3i6i_A 134 --LNMYREKRRVRQLVEE----SGIPFTYICCNSIASWPYYNNI----HPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGK 203 (346)
T ss_dssp --HHHHHHHHHHHHHHHH----TTCCBEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHHH
T ss_pred --chHHHHHHHHHHHHHH----cCCCEEEEEecccccccCcccc----ccccccCCCceEEEccCCCceEEecCHHHHHH
Confidence 5899999999998764 5899999999999996532211 1111111222222 3 346789999999999
Q ss_pred HHHHhhcCCCCCc-eEEEe--cCcccHHHHHHHHHhhCCCCCCc
Q 026820 157 AQVLLFETSAASG-RYLCT--NGIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 157 ~~~~~~~~~~~~~-~~~~~--~~~~s~~el~~~i~~~~p~~~~~ 197 (232)
+++.++..+...+ .+++. ++.+|+.|+++.+++.+ +.+++
T Consensus 204 ~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~-g~~~~ 246 (346)
T 3i6i_A 204 FTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKI-GRTLP 246 (346)
T ss_dssp HHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHH-TSCCC
T ss_pred HHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHH-CCCCc
Confidence 9999998876545 45543 57899999999999998 55554
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.4e-16 Score=125.66 Aligned_cols=150 Identities=19% Similarity=0.196 Sum_probs=106.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+.... ...|+.++++++++|++.|++++|++||.+. . +..+.
T Consensus 67 d~vi~~a~~~~~----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~----~---------~~~~~-------- 115 (289)
T 3e48_A 67 DTVVFIPSIIHP----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYAD----Q---------HNNPF-------- 115 (289)
T ss_dssp SEEEECCCCCCS----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCC----S---------TTCCS--------
T ss_pred CEEEEeCCCCcc----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCC----C---------CCCCC--------
Confidence 799999987542 1348999999999999999999999998522 1 11110
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc--cCCcccCceeHHhHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT--QEHYWLGAVHVKDVAKAQ 158 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~D~a~~~ 158 (232)
.+...+..+|..+ ++.+++++++||+.++|+. ..++..+..+.... .+++.++++|++|+|+++
T Consensus 116 --~~~~~~~~~e~~~----~~~g~~~~ilrp~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~ 181 (289)
T 3e48_A 116 --HMSPYFGYASRLL----STSGIDYTYVRMAMYMDPL--------KPYLPELMNMHKLIYPAGDGRINYITRNDIARGV 181 (289)
T ss_dssp --TTHHHHHHHHHHH----HHHCCEEEEEEECEESTTH--------HHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHH
T ss_pred --ccchhHHHHHHHH----HHcCCCEEEEecccccccc--------HHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHH
Confidence 1112223445443 3459999999999999862 12333333333333 456788999999999999
Q ss_pred HHhhcCCCCCc-eEEEecCcccHHHHHHHHHhhCCCCCC
Q 026820 159 VLLFETSAASG-RYLCTNGIYQFAEFAEKVSKLFPEYPI 196 (232)
Q Consensus 159 ~~~~~~~~~~~-~~~~~~~~~s~~el~~~i~~~~p~~~~ 196 (232)
+.++..+...| .|+++++.+|+.|+++.+++.+ +.++
T Consensus 182 ~~~l~~~~~~g~~~~~~~~~~s~~e~~~~~~~~~-g~~~ 219 (289)
T 3e48_A 182 IAIIKNPDTWGKRYLLSGYSYDMKELAAILSEAS-GTEI 219 (289)
T ss_dssp HHHHHCGGGTTCEEEECCEEEEHHHHHHHHHHHH-TSCC
T ss_pred HHHHcCCCcCCceEEeCCCcCCHHHHHHHHHHHH-CCce
Confidence 99998876645 6776677799999999999988 4433
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.9e-16 Score=121.70 Aligned_cols=141 Identities=16% Similarity=0.036 Sum_probs=102.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.... ....+..+++|+.++.+++++|.+.+++++|++||. .+|+.. .
T Consensus 86 d~vi~~ag~~~~---~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~-~~~~~~----------------~----- 140 (242)
T 2bka_A 86 DVGFCCLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSK-GADKSS----------------N----- 140 (242)
T ss_dssp SEEEECCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCT-TCCTTC----------------S-----
T ss_pred CEEEECCCcccc---cCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccC-cCCCCC----------------c-----
Confidence 799999998543 223567889999999999999999988999999997 434311 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCC-cEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGT-DVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~-~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~ 159 (232)
+.|+.+|...|.+++. .++ +++++||+.++|+.... .....+...+....+..++ ...+++++|+|++++
T Consensus 141 -~~Y~~sK~~~e~~~~~----~~~~~~~~vrpg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~dva~~~~ 211 (242)
T 2bka_A 141 -FLYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFGSLPDSWA--SGHSVPVVTVVRAML 211 (242)
T ss_dssp -SHHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGG--SHHHHHHHHHHCSCCTTGG--GGTEEEHHHHHHHHH
T ss_pred -chHHHHHHHHHHHHHh----cCCCCeEEEcCceecCCCCCC--cHHHHHHHHhhcccCcccc--CCcccCHHHHHHHHH
Confidence 4899999999998654 478 59999999999986432 1222223333322221122 235899999999999
Q ss_pred HhhcCCCCCceEEEec
Q 026820 160 LLFETSAASGRYLCTN 175 (232)
Q Consensus 160 ~~~~~~~~~~~~~~~~ 175 (232)
.++.++...+.+++++
T Consensus 212 ~~~~~~~~~~~~~~~~ 227 (242)
T 2bka_A 212 NNVVRPRDKQMELLEN 227 (242)
T ss_dssp HHHTSCCCSSEEEEEH
T ss_pred HHHhCccccCeeEeeH
Confidence 9998877667776654
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.67 E-value=5.6e-17 Score=128.55 Aligned_cols=154 Identities=12% Similarity=0.073 Sum_probs=111.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+++... ......|+.++++++++|++.|++++|++||. .+|+... .. +
T Consensus 74 d~vi~~a~~~~--------~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~-~~~~~~~---------~~---~------ 126 (299)
T 2wm3_A 74 YATFIVTNYWE--------SCSQEQEVKQGKLLADLARRLGLHYVVYSGLE-NIKKLTA---------GR---L------ 126 (299)
T ss_dssp SEEEECCCHHH--------HTCHHHHHHHHHHHHHHHHHHTCSEEEECCCC-CHHHHTT---------TS---C------
T ss_pred CEEEEeCCCCc--------cccchHHHHHHHHHHHHHHHcCCCEEEEEcCc-cccccCC---------Cc---c------
Confidence 78999987522 11245788999999999999999999997775 5454221 10 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCC--Cc--cCCcccCceeHHhHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSK--DT--QEHYWLGAVHVKDVAK 156 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~i~v~D~a~ 156 (232)
.+.|+.+|..+|++++. .+++++++||+.+||+........ ....+.. +. .++..++++|++|+|+
T Consensus 127 ~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~i~~~Dva~ 196 (299)
T 2wm3_A 127 AAAHFDGKGEVEEYFRD----IGVPMTSVRLPCYFENLLSHFLPQ------KAPDGKSYLLSLPTGDVPMDGMSVSDLGP 196 (299)
T ss_dssp CCHHHHHHHHHHHHHHH----HTCCEEEEECCEEGGGGGTTTCCE------ECTTSSSEEECCCCTTSCEEEECGGGHHH
T ss_pred cCchhhHHHHHHHHHHH----CCCCEEEEeecHHhhhchhhcCCc------ccCCCCEEEEEecCCCCccceecHHHHHH
Confidence 14799999999999764 489999999999999643210000 0112211 11 3567789999999999
Q ss_pred HHHHhhcCCC-CCc-eEEEecCcccHHHHHHHHHhhC
Q 026820 157 AQVLLFETSA-ASG-RYLCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 157 ~~~~~~~~~~-~~~-~~~~~~~~~s~~el~~~i~~~~ 191 (232)
+++.++..+. ..| .|+++++.+|+.|+++.+.+.+
T Consensus 197 ~~~~~l~~~~~~~g~~~~~~g~~~s~~e~~~~~~~~~ 233 (299)
T 2wm3_A 197 VVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHT 233 (299)
T ss_dssp HHHHHHHSHHHHTTCEEECCSEEECHHHHHHHHHHHH
T ss_pred HHHHHHcChhhhCCeEEEeeeccCCHHHHHHHHHHHH
Confidence 9999997642 234 6887777899999999999987
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.3e-16 Score=126.32 Aligned_cols=151 Identities=13% Similarity=0.054 Sum_probs=107.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CCEEEEecccce-eccCCCCCCCCccCCCCCCCccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISS-IVPNPNWPQGKVIDETSWTDLDFCK 78 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~i~~Ss~~~-~~~~~~~~~~~~~~E~~~~~~~~~~ 78 (232)
|+|||+++... ...|..+ ++++++|++.| +++||++||.+. .|+. . +
T Consensus 75 d~Vi~~a~~~~-----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~--------------~-~---- 123 (352)
T 1xgk_A 75 HLAFINTTSQA-----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP--------------W-P---- 123 (352)
T ss_dssp SEEEECCCSTT-----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS--------------C-C----
T ss_pred CEEEEcCCCCC-----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC--------------C-C----
Confidence 78999987532 1347776 99999999998 999999999741 2221 0 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHH-HHhCCCC---c-cCCcccCceeH-H
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQR-LLQGSKD---T-QEHYWLGAVHV-K 152 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~-~~~~~~~---~-~~~~~~~~i~v-~ 152 (232)
.+.|+.+|..+|++++. .+++++++||+ +||++.......+ +... ...+... . .+++.++++|+ +
T Consensus 124 --~~~y~~sK~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~ 194 (352)
T 1xgk_A 124 --AVPMWAPKFTVENYVRQ----LGLPSTFVYAG-IYNNNFTSLPYPL--FQMELMPDGTFEWHAPFDPDIPLPWLDAEH 194 (352)
T ss_dssp --CCTTTHHHHHHHHHHHT----SSSCEEEEEEC-EEGGGCBSSSCSS--CBEEECTTSCEEEEESSCTTSCEEEECHHH
T ss_pred --CccHHHHHHHHHHHHHH----cCCCEEEEecc-eecCCchhccccc--ccccccCCCceEEeeccCCCCceeeEecHH
Confidence 14799999999999764 48999999976 7888654321100 0000 1123321 1 25578899999 8
Q ss_pred hHHHHHHHhhcCCC---CCceEEEecCcccHHHHHHHHHhhC
Q 026820 153 DVAKAQVLLFETSA---ASGRYLCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 153 D~a~~~~~~~~~~~---~~~~~~~~~~~~s~~el~~~i~~~~ 191 (232)
|+|++++.++.++. .+..|+++++.+|+.|+++.+.+.+
T Consensus 195 Dva~ai~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~ 236 (352)
T 1xgk_A 195 DVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRAL 236 (352)
T ss_dssp HHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 99999999997652 2347888877899999999999987
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.59 E-value=4.3e-15 Score=114.82 Aligned_cols=168 Identities=13% Similarity=0.052 Sum_probs=106.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccceeccCCCCCCCCccCC-------C
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQGKVIDE-------T 69 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E-------~ 69 (232)
|+|||+||.... ..+....+++|+.++.++++++... +.+++|++||.++ |+.... ..+..| +
T Consensus 64 d~vi~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~~--~~~~~~~~~~~~~~ 137 (255)
T 2dkn_A 64 DGLVCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA-TQPGAA--ELPMVEAMLAGDEA 137 (255)
T ss_dssp SEEEECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG-GSTTGG--GCHHHHHHHHTCHH
T ss_pred cEEEECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc-cccccc--ccchhhhhcccchh
Confidence 799999998653 3457899999999999999987654 5679999999844 432210 001111 0
Q ss_pred CCCCc-ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHH-HHHHHHhCCCCccCCc
Q 026820 70 SWTDL-DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGA-VLQRLLQGSKDTQEHY 144 (232)
Q Consensus 70 ~~~~~-~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 144 (232)
.+... ..+....+.|+.+|...|.+++.++++ .+++++++||+.++|+.... .... ......... .+ .
T Consensus 138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~---~~~~~~~~~~~~~~---~~-~ 210 (255)
T 2dkn_A 138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQA---SKADPRYGESTRRF---VA-P 210 (255)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHH---HHHCTTTHHHHHSC---CC-T
T ss_pred hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhh---cccchhhHHHHHHH---HH-H
Confidence 00000 000012368999999999999988765 58999999999999863210 0000 000111110 01 3
Q ss_pred ccCceeHHhHHHHHHHhhcCC--CCCc-eEEEec-CcccHH
Q 026820 145 WLGAVHVKDVAKAQVLLFETS--AASG-RYLCTN-GIYQFA 181 (232)
Q Consensus 145 ~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~-~~~s~~ 181 (232)
..++++++|+|++++.++..+ ...| .|++++ ..++++
T Consensus 211 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~ 251 (255)
T 2dkn_A 211 LGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMR 251 (255)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHC
T ss_pred hcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeee
Confidence 347999999999999999765 3456 577765 334443
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=4.8e-14 Score=105.35 Aligned_cols=134 Identities=17% Similarity=0.097 Sum_probs=95.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.... . ...+.|+.++.+++++|.+.+++++|++||. .+|+..... + .+
T Consensus 69 d~vi~~a~~~~~---~----~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~-~~~~~~~~~---------~-~~------ 124 (206)
T 1hdo_A 69 DAVIVLLGTRND---L----SPTTVMSEGARNIVAAMKAHGVDKVVACTSA-FLLWDPTKV---------P-PR------ 124 (206)
T ss_dssp SEEEECCCCTTC---C----SCCCHHHHHHHHHHHHHHHHTCCEEEEECCG-GGTSCTTCS---------C-GG------
T ss_pred CEEEECccCCCC---C----CccchHHHHHHHHHHHHHHhCCCeEEEEeee-eeccCcccc---------c-cc------
Confidence 789999997653 1 1235899999999999999999999999997 555533210 0 02
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcc-cCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYW-LGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~ 159 (232)
.+.|+.+|..+|+++. +.+++++++||+.+ |++.... .... ..++.. .+++|++|+|++++
T Consensus 125 ~~~y~~~K~~~e~~~~----~~~i~~~~lrp~~~-~~~~~~~-~~~~------------~~~~~~~~~~i~~~Dva~~~~ 186 (206)
T 1hdo_A 125 LQAVTDDHIRMHKVLR----ESGLKYVAVMPPHI-GDQPLTG-AYTV------------TLDGRGPSRVISKHDLGHFML 186 (206)
T ss_dssp GHHHHHHHHHHHHHHH----HTCSEEEEECCSEE-ECCCCCS-CCEE------------ESSSCSSCSEEEHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHH----hCCCCEEEEeCCcc-cCCCCCc-ceEe------------cccCCCCCCccCHHHHHHHHH
Confidence 2589999999999974 45899999999998 3332111 0000 011111 58999999999999
Q ss_pred HhhcCCCCCc-eEEEecC
Q 026820 160 LLFETSAASG-RYLCTNG 176 (232)
Q Consensus 160 ~~~~~~~~~~-~~~~~~~ 176 (232)
.++.++...| .|+++++
T Consensus 187 ~~~~~~~~~g~~~~i~~g 204 (206)
T 1hdo_A 187 RCLTTDEYDGHSTYPSHQ 204 (206)
T ss_dssp HTTSCSTTTTCEEEEECC
T ss_pred HHhcCccccccceeeecc
Confidence 9998876666 5777653
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.58 E-value=4.4e-15 Score=116.66 Aligned_cols=170 Identities=16% Similarity=0.070 Sum_probs=108.2
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHH----HHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQG----TLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+.....+++|+.+ ++.++..+++.+..++|++||.++..+.+
T Consensus 81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------------- 146 (281)
T 3m1a_A 81 DVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFA-------------- 146 (281)
T ss_dssp SEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT--------------
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCC--------------
Confidence 7999999986431 1122345678999999 55555555666777999999975532211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCC----hhHHHHHHHHhCCCCccCCcc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVN----ASGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 145 (232)
+ .+.|+.||...|.+.+.++.+ .|++++++|||.+.++....... ....+................
T Consensus 147 -~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (281)
T 3m1a_A 147 -G------FSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDG 219 (281)
T ss_dssp -T------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC---
T ss_pred -C------chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccC
Confidence 1 158999999999999998876 69999999999998765332110 011111111100000011123
Q ss_pred cCceeHHhHHHHHHHhhcCCCCCceEEEec-CcccHHHHHHHHHhhC
Q 026820 146 LGAVHVKDVAKAQVLLFETSAASGRYLCTN-GIYQFAEFAEKVSKLF 191 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~el~~~i~~~~ 191 (232)
..+.+++|+|++++.++..+...++|++++ ......+....+.+.+
T Consensus 220 ~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~ 266 (281)
T 3m1a_A 220 SQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAEL 266 (281)
T ss_dssp --CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHH
Confidence 467889999999999998887666776654 4455666666655543
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=6.1e-14 Score=109.85 Aligned_cols=167 Identities=16% Similarity=0.139 Sum_probs=115.2
Q ss_pred CeEEEeecCCCCC------CCCCchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLD------DPKDPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||..... ...+.....+++|+.++.++++++... +..++|++||.++ +....
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~~~~----------- 161 (278)
T 2bgk_A 94 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISS-FTAGE----------- 161 (278)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGG-TCCCT-----------
T ss_pred CEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccc-cCCCC-----------
Confidence 7999999976420 111234678899999999999988653 5569999999744 22110
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
.+ ...|+.+|...|.+++.++.+ .|++++++|||.++|+...............+.... +.....
T Consensus 162 --~~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 229 (278)
T 2bgk_A 162 --GV------SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA----ANLKGT 229 (278)
T ss_dssp --TS------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHT----CSSCSC
T ss_pred --CC------CcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcc----cccccc
Confidence 01 148999999999999988765 589999999999999865432211122223322221 112346
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCc-eEEEec-CcccHHHHHHHHHhhC
Q 026820 148 AVHVKDVAKAQVLLFETS--AASG-RYLCTN-GIYQFAEFAEKVSKLF 191 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~-~~~s~~el~~~i~~~~ 191 (232)
+++++|+|++++.++... ...| .+++++ ..+++.|+++.+++.+
T Consensus 230 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 230 LLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred cCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence 899999999999998653 3456 467764 5689999999887643
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.4e-14 Score=106.47 Aligned_cols=128 Identities=16% Similarity=0.060 Sum_probs=95.3
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~ 76 (232)
|+|||+||..... ...+.....+++|+.++.++++++.+.+.+++|++||.++..+.. +
T Consensus 68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~---------------~-- 130 (207)
T 2yut_A 68 DLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVP---------------G-- 130 (207)
T ss_dssp EEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSST---------------T--
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCC---------------C--
Confidence 7899999986541 123455778999999999999999766777999999974422111 1
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHh
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKD 153 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 153 (232)
.+.|+.+|...|.+++.++.+ .|++++++||+.++++.... .+...+.+++++|
T Consensus 131 ----~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~-------------------~~~~~~~~~~~~d 187 (207)
T 2yut_A 131 ----FAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAP-------------------LGGPPKGALSPEE 187 (207)
T ss_dssp ----BHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGG-------------------GTSCCTTCBCHHH
T ss_pred ----cchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccc-------------------cCCCCCCCCCHHH
Confidence 158999999999999998766 59999999999998764110 1122357999999
Q ss_pred HHHHHHHhhcCCCCC
Q 026820 154 VAKAQVLLFETSAAS 168 (232)
Q Consensus 154 ~a~~~~~~~~~~~~~ 168 (232)
+|++++.++.++...
T Consensus 188 va~~~~~~~~~~~~~ 202 (207)
T 2yut_A 188 AARKVLEGLFREPVP 202 (207)
T ss_dssp HHHHHHHHHC--CCC
T ss_pred HHHHHHHHHhCCCCc
Confidence 999999999776543
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.9e-14 Score=114.51 Aligned_cols=161 Identities=14% Similarity=0.083 Sum_probs=106.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CCEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+++.... ..|+.++++++++|++.| +++||+ |+ |+... +. . +.+..+.
T Consensus 78 d~vi~~a~~~~~-----------~~~~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~~---~~-~--~~~~~p~---- 131 (313)
T 1qyd_A 78 DVVISALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLP-SE----FGMDP---DI-M--EHALQPG---- 131 (313)
T ss_dssp SEEEECCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEEC-SC----CSSCT---TS-C--CCCCSST----
T ss_pred CEEEECCccccc-----------hhhHHHHHHHHHHHHhcCCCceEEe-cC----CcCCc---cc-c--ccCCCCC----
Confidence 789999997543 126788999999999998 999985 43 23211 10 1 1122221
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-c--CCcccCceeHHhHHH
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-Q--EHYWLGAVHVKDVAK 156 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~ 156 (232)
.+.| .+|..+|++++ +.+++++++||+.++|........... .....++... + ++..++++|++|+|+
T Consensus 132 -~~~y-~sK~~~e~~~~----~~g~~~~ilrp~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~i~~~Dva~ 202 (313)
T 1qyd_A 132 -SITF-IDKRKVRRAIE----AASIPYTYVSSNMFAGYFAGSLAQLDG---HMMPPRDKVLIYGDGNVKGIWVDEDDVGT 202 (313)
T ss_dssp -THHH-HHHHHHHHHHH----HTTCCBCEEECCEEHHHHTTTSSCTTC---CSSCCSSEECCBTTSCSEEEEECHHHHHH
T ss_pred -cchH-HHHHHHHHHHH----hcCCCeEEEEeceeccccccccccccc---cccCCCCeEEEeCCCCceEEEEEHHHHHH
Confidence 1468 99999999865 458999999999888743211000000 0001222222 3 346789999999999
Q ss_pred HHHHhhcCCCCCc-eE-EEe-cCcccHHHHHHHHHhhCCCCCCc
Q 026820 157 AQVLLFETSAASG-RY-LCT-NGIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 157 ~~~~~~~~~~~~~-~~-~~~-~~~~s~~el~~~i~~~~p~~~~~ 197 (232)
+++.++.++...+ .+ +++ ++.+|+.|+++.+++.+ +.+++
T Consensus 203 ~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~-g~~~~ 245 (313)
T 1qyd_A 203 YTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLS-EQNLD 245 (313)
T ss_dssp HHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHH-TCCCE
T ss_pred HHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhc-CCCCc
Confidence 9999998765444 45 444 46799999999999998 44443
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=4.1e-14 Score=112.99 Aligned_cols=152 Identities=12% Similarity=-0.001 Sum_probs=103.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CCEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+++... +.++++++++|++.| +++||+ |+ ||.. .+|..+..|.
T Consensus 81 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~-------~~~~~~~~p~---- 129 (318)
T 2r6j_A 81 DVVISALAFPQ---------------ILDQFKILEAIKVAGNIKRFLP-SD----FGVE-------EDRINALPPF---- 129 (318)
T ss_dssp SEEEECCCGGG---------------STTHHHHHHHHHHHCCCCEEEC-SC----CSSC-------TTTCCCCHHH----
T ss_pred CEEEECCchhh---------------hHHHHHHHHHHHhcCCCCEEEe-ec----cccC-------cccccCCCCc----
Confidence 78999998631 456789999999998 999985 43 2321 1333332232
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-c--CCcccCceeHHhHHH
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-Q--EHYWLGAVHVKDVAK 156 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~ 156 (232)
.+.| .+|..+|++++ +.+++++++||+.+++. ....++.....+.... + ++..++++|++|+++
T Consensus 130 -~~~y-~sK~~~e~~~~----~~~~~~~~lr~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 196 (318)
T 2r6j_A 130 -EALI-ERKRMIRRAIE----EANIPYTYVSANCFASY-------FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGL 196 (318)
T ss_dssp -HHHH-HHHHHHHHHHH----HTTCCBEEEECCEEHHH-------HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHH
T ss_pred -chhH-HHHHHHHHHHH----hcCCCeEEEEcceehhh-------hhhhhccccCCCCceEEecCCCceeeEeeHHHHHH
Confidence 1468 99999998865 45899999999877642 2222222112223222 3 346789999999999
Q ss_pred HHHHhhcCCCCCc-eE-EEe-cCcccHHHHHHHHHhhCCCCCCc
Q 026820 157 AQVLLFETSAASG-RY-LCT-NGIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 157 ~~~~~~~~~~~~~-~~-~~~-~~~~s~~el~~~i~~~~p~~~~~ 197 (232)
+++.++.++...+ .+ +++ ++.+|+.|+++.+++.+ +.+++
T Consensus 197 ~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~-g~~~~ 239 (318)
T 2r6j_A 197 YTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKI-GKKFK 239 (318)
T ss_dssp HHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHH-TCCCE
T ss_pred HHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHh-CCCCc
Confidence 9999998765445 44 444 46799999999999998 55544
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.50 E-value=7.2e-14 Score=110.91 Aligned_cols=155 Identities=12% Similarity=0.018 Sum_probs=103.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CCEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+++... +.++.+++++|++.| +++||+ |+ ||.. .+|..+..|.
T Consensus 78 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~-------~~~~~~~~p~---- 126 (307)
T 2gas_A 78 DIVICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-SE----FGLD-------VDRHDAVEPV---- 126 (307)
T ss_dssp SEEEECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-SC----CSSC-------TTSCCCCTTH----
T ss_pred CEEEECCcccc---------------cccHHHHHHHHHhcCCceEEee-cc----cccC-------cccccCCCcc----
Confidence 78999998732 456789999999998 999984 43 2321 1233332332
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-c--CCcccCceeHHhHHH
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-Q--EHYWLGAVHVKDVAK 156 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~ 156 (232)
.+.| .+|..+|++++. .+++++++||+.++|......... ......++... + ++..++++|++|+|+
T Consensus 127 -~~~y-~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 196 (307)
T 2gas_A 127 -RQVF-EEKASIRRVIEA----EGVPYTYLCCHAFTGYFLRNLAQL----DATDPPRDKVVILGDGNVKGAYVTEADVGT 196 (307)
T ss_dssp -HHHH-HHHHHHHHHHHH----HTCCBEEEECCEETTTTGGGTTCT----TCSSCCSSEEEEETTSCSEEEEECHHHHHH
T ss_pred -hhHH-HHHHHHHHHHHH----cCCCeEEEEcceeecccccccccc----ccccCCCCeEEEecCCCcceEEeeHHHHHH
Confidence 1478 999999998754 489999999998887532110000 00001122222 3 335789999999999
Q ss_pred HHHHhhcCCCCCc-eE-EEe-cCcccHHHHHHHHHhhCCCCCCc
Q 026820 157 AQVLLFETSAASG-RY-LCT-NGIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 157 ~~~~~~~~~~~~~-~~-~~~-~~~~s~~el~~~i~~~~p~~~~~ 197 (232)
+++.++..+...+ .+ +.+ ++.+|+.|+++.+++.+ +.+++
T Consensus 197 ~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~-g~~~~ 239 (307)
T 2gas_A 197 FTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKI-GKTLE 239 (307)
T ss_dssp HHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHH-TSCCE
T ss_pred HHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHh-CCCCc
Confidence 9999998765545 34 444 46799999999999998 55544
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.50 E-value=4.2e-14 Score=112.28 Aligned_cols=155 Identities=14% Similarity=0.139 Sum_probs=103.8
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CCEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+++... +.++.+++++|++.| +++||+ |+. |.. .+|..+..|.
T Consensus 79 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~~----g~~-------~~~~~~~~p~---- 127 (308)
T 1qyc_A 79 DVVISTVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-SEF----GND-------VDNVHAVEPA---- 127 (308)
T ss_dssp SEEEECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-SCC----SSC-------TTSCCCCTTH----
T ss_pred CEEEECCcchh---------------hhhHHHHHHHHHhcCCCceEee-ccc----ccC-------ccccccCCcc----
Confidence 78999998632 446789999999998 999984 543 221 1233333332
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-c--CCcccCceeHHhHHH
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-Q--EHYWLGAVHVKDVAK 156 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~ 156 (232)
.+.| .+|..+|++++. .+++++++||+.++|.......... .....++... + ++..++++|++|+++
T Consensus 128 -~~~y-~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ 197 (308)
T 1qyc_A 128 -KSVF-EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAG----LTAPPRDKVVILGDGNARVVFVKEEDIGT 197 (308)
T ss_dssp -HHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTT----CSSCCSSEEEEETTSCCEEEEECHHHHHH
T ss_pred -hhHH-HHHHHHHHHHHh----cCCCeEEEEeceecccccccccccc----ccCCCCCceEEecCCCceEEEecHHHHHH
Confidence 1468 999999998754 4899999999998874321100000 0001122222 2 346789999999999
Q ss_pred HHHHhhcCCCCCc-eEEE-e-cCcccHHHHHHHHHhhCCCCCCc
Q 026820 157 AQVLLFETSAASG-RYLC-T-NGIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 157 ~~~~~~~~~~~~~-~~~~-~-~~~~s~~el~~~i~~~~p~~~~~ 197 (232)
+++.++.++...+ .+++ + ++.+|+.|+++.+++.+ +.+++
T Consensus 198 ~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~-g~~~~ 240 (308)
T 1qyc_A 198 FTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKI-DKTLE 240 (308)
T ss_dssp HHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHT-TSCCE
T ss_pred HHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHh-CCCCc
Confidence 9999998765445 4544 4 46799999999999999 55554
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.50 E-value=4.9e-14 Score=112.63 Aligned_cols=152 Identities=11% Similarity=-0.009 Sum_probs=103.7
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CCEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+++... +.++++++++|.+.| +++||+ |+ |+.. .+|+.+..+.
T Consensus 79 d~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~----~g~~-------~~~~~~~~p~---- 127 (321)
T 3c1o_A 79 DIVISALPFPM---------------ISSQIHIINAIKAAGNIKRFLP-SD----FGCE-------EDRIKPLPPF---- 127 (321)
T ss_dssp SEEEECCCGGG---------------SGGGHHHHHHHHHHCCCCEEEC-SC----CSSC-------GGGCCCCHHH----
T ss_pred CEEEECCCccc---------------hhhHHHHHHHHHHhCCccEEec-cc----cccC-------ccccccCCCc----
Confidence 78999998631 556799999999998 999983 43 2321 1333332231
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHH---HHHhCCCCc-c--CCcccCceeHHh
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQ---RLLQGSKDT-Q--EHYWLGAVHVKD 153 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~---~~~~~~~~~-~--~~~~~~~i~v~D 153 (232)
.+.| .+|..+|++++. .+++++++||+.++|.. ...+.. ....++... + ++..++++|++|
T Consensus 128 -~~~y-~sK~~~e~~~~~----~~~~~~~lrp~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 194 (321)
T 3c1o_A 128 -ESVL-EKKRIIRRAIEA----AALPYTYVSANCFGAYF-------VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEED 194 (321)
T ss_dssp -HHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHH-------HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHH
T ss_pred -chHH-HHHHHHHHHHHH----cCCCeEEEEeceecccc-------ccccccccccccccCceEEecCCCcceeEeeHHH
Confidence 2578 999999998754 48999999999887631 111111 001222222 3 346789999999
Q ss_pred HHHHHHHhhcCCCCCc-eEEE-e-cCcccHHHHHHHHHhhCCCCCCc
Q 026820 154 VAKAQVLLFETSAASG-RYLC-T-NGIYQFAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 154 ~a~~~~~~~~~~~~~~-~~~~-~-~~~~s~~el~~~i~~~~p~~~~~ 197 (232)
+|++++.++..+...+ .+++ + ++.+|+.|+++.+++.+ +.+++
T Consensus 195 va~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~-g~~~~ 240 (321)
T 3c1o_A 195 IAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKS-GLSFK 240 (321)
T ss_dssp HHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHH-TSCCC
T ss_pred HHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHc-CCcce
Confidence 9999999998765545 4544 4 47799999999999998 55444
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=3.6e-13 Score=106.73 Aligned_cols=164 Identities=13% Similarity=0.020 Sum_probs=108.6
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHHH-----cCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAKK-----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~-----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ..........+++|+.++.++++++.. .+..++|++||..+..+.+.
T Consensus 106 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------ 173 (302)
T 1w6u_A 106 NIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF------------ 173 (302)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT------------
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCC------------
Confidence 799999997543 112233467889999999999888753 24468999999754332111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...|.+++.++.+ .|++++++|||.++++...............+..+.+ ...+
T Consensus 174 ---------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p------~~~~ 238 (302)
T 1w6u_A 174 ---------VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP------CGRL 238 (302)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT------TSSC
T ss_pred ---------cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCC------cCCC
Confidence 158999999999999998876 6899999999999987432211111111122222221 1247
Q ss_pred eeHHhHHHHHHHhhcCCC--CCc-eEEEec-CcccHHHHHHHHHhhC
Q 026820 149 VHVKDVAKAQVLLFETSA--ASG-RYLCTN-GIYQFAEFAEKVSKLF 191 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~--~~~-~~~~~~-~~~s~~el~~~i~~~~ 191 (232)
++++|+|++++.++.... ..| .+++++ ..+++.++++.+.+..
T Consensus 239 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~ 285 (302)
T 1w6u_A 239 GTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVT 285 (302)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCC
T ss_pred CCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhc
Confidence 889999999999986533 356 467765 4577777777766554
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=8.5e-13 Score=103.41 Aligned_cols=163 Identities=16% Similarity=0.148 Sum_probs=97.3
Q ss_pred CeEEEeecCCCCCC--------CCCchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccce-eccCCCCCCCCccC
Q 026820 1 MGVFHLASPNTLDD--------PKDPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISS-IVPNPNWPQGKVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~-~~~~~~~~~~~~~~ 67 (232)
|+|||+||...... ..+..+..+++|+.++.++++++... + .++|++||.++ ..+.+
T Consensus 88 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~--------- 157 (278)
T 1spx_A 88 DILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATP--------- 157 (278)
T ss_dssp CEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCT---------
T ss_pred CEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCC---------
Confidence 79999999864311 22234577899999999999887653 5 79999999743 22111
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC---Chh---HHHHHHHHhCCC
Q 026820 68 ETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV---NAS---GAVLQRLLQGSK 138 (232)
Q Consensus 68 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~---~~~---~~~~~~~~~~~~ 138 (232)
. ...|+.+|...|.+.+.++.+ .|++++++|||.+.++...... ... ......+....+
T Consensus 158 ------~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p 225 (278)
T 1spx_A 158 ------D------FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP 225 (278)
T ss_dssp ------T------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT
T ss_pred ------C------ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCC
Confidence 1 148999999999999888754 5899999999999887532210 000 000122211111
Q ss_pred CccCCcccCceeHHhHHHHHHHhhcCCC---CCc-eEEEec-CcccHHHHHHHHHhhC
Q 026820 139 DTQEHYWLGAVHVKDVAKAQVLLFETSA---ASG-RYLCTN-GIYQFAEFAEKVSKLF 191 (232)
Q Consensus 139 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~-~~~~~~-~~~s~~el~~~i~~~~ 191 (232)
...+++++|+|++++.++..+. .+| .++++| ..+++.++++.+.+.+
T Consensus 226 ------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 226 ------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp ------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred ------CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 1247899999999999986532 456 467764 5689999999887653
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.45 E-value=2.8e-13 Score=104.07 Aligned_cols=148 Identities=17% Similarity=0.144 Sum_probs=101.0
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc----C-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF----G-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..+++|+.++.++++++... + ..++|++||..+ +....
T Consensus 78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~------------ 144 (244)
T 1cyd_A 78 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVA-HVTFP------------ 144 (244)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG-TSCCT------------
T ss_pred CEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhh-cCCCC------------
Confidence 79999999765311 12234568899999999999887653 4 569999999744 22110
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
+ ...|+.+|...|.+++.++.+ .+++++++||+.++++...... ....++..+..+. ..+++
T Consensus 145 --~------~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~------~~~~~ 209 (244)
T 1cyd_A 145 --N------LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS-ADPEFARKLKERH------PLRKF 209 (244)
T ss_dssp --T------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT-CCHHHHHHHHHHS------TTSSC
T ss_pred --C------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccc-cCHHHHHHHHhcC------CccCC
Confidence 1 158999999999999998766 5899999999999986422100 1122333333332 23579
Q ss_pred eeHHhHHHHHHHhhcCCC--CCc-eEEEecC
Q 026820 149 VHVKDVAKAQVLLFETSA--ASG-RYLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 176 (232)
++++|+|++++.++.... ..| .+.+++.
T Consensus 210 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 240 (244)
T 1cyd_A 210 AEVEDVVNSILFLLSDRSASTSGGGILVDAG 240 (244)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred CCHHHHHHHHHHHhCchhhcccCCEEEECCC
Confidence 999999999999997542 345 3556543
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-12 Score=101.02 Aligned_cols=150 Identities=17% Similarity=0.125 Sum_probs=103.3
Q ss_pred CeEEEeecCCCCCC---CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDD---PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||...... ........+++|+.++.++++++. +.+.+++|++||.++ +....
T Consensus 90 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~-------------- 154 (255)
T 1fmc_A 90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA-ENKNI-------------- 154 (255)
T ss_dssp CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG-TCCCT--------------
T ss_pred CEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh-cCCCC--------------
Confidence 79999999865411 122346778999999999998875 346679999999744 22110
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
+ .+.|+.+|...|.+++.++.+. +++++++|||.++++..... ........+..+.+ ...+++
T Consensus 155 ~------~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~------~~~~~~ 220 (255)
T 1fmc_A 155 N------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTP------IRRLGQ 220 (255)
T ss_dssp T------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CCHHHHHHHHHTCS------SCSCBC
T ss_pred C------CcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc--cChHHHHHHHhcCC------cccCCC
Confidence 1 1589999999999999887654 89999999999998643221 11233334444432 235789
Q ss_pred HHhHHHHHHHhhcCCC--CCc-eEEEec-Cccc
Q 026820 151 VKDVAKAQVLLFETSA--ASG-RYLCTN-GIYQ 179 (232)
Q Consensus 151 v~D~a~~~~~~~~~~~--~~~-~~~~~~-~~~s 179 (232)
++|+|++++.++.... ..| .|++++ ..+|
T Consensus 221 ~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s 253 (255)
T 1fmc_A 221 PQDIANAALFLCSPAASWVSGQILTVSGGGVQE 253 (255)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred HHHHHHHHHHHhCCccccCCCcEEEECCceecc
Confidence 9999999999986542 345 577764 4454
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.40 E-value=2.9e-12 Score=99.70 Aligned_cols=147 Identities=14% Similarity=0.126 Sum_probs=86.6
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+.....+++|+.++.++++++ ++.+.+++|++||.++..+.+.
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------- 160 (266)
T 1xq1_A 94 DILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV------------- 160 (266)
T ss_dssp SEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------------
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCC-------------
Confidence 79999999865311 12234567899999999999988 4456789999999744322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+.+.++.+. +++++++|||.++++...... ...+...+.... ....++
T Consensus 161 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~------~~~~~~ 224 (266)
T 1xq1_A 161 --------GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDEFKKVVISRK------PLGRFG 224 (266)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------------C
T ss_pred --------CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc--CHHHHHHHHhcC------CCCCCc
Confidence 1489999999999999887663 899999999999987543211 011111111111 112478
Q ss_pred eHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
+++|+|+++..++... ...| .+++++.
T Consensus 225 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 254 (266)
T 1xq1_A 225 EPEEVSSLVAFLCMPAASYITGQTICVDGG 254 (266)
T ss_dssp CGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred CHHHHHHHHHHHcCccccCccCcEEEEcCC
Confidence 9999999999988643 2346 4566543
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.1e-12 Score=100.62 Aligned_cols=147 Identities=18% Similarity=0.133 Sum_probs=99.0
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHH----HHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLE----AAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~----~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..+++|+.++.++++ .+++.+.+++|++||..+.++.+.
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------- 148 (245)
T 2ph3_A 82 DTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPG------------- 148 (245)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSS-------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCC-------------
Confidence 7999999986531 1122346778999999555554 455567789999999855444221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+.+.++.+. +++++++||+.++++.... ........+....+ ...++
T Consensus 149 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~------~~~~~ 211 (245)
T 2ph3_A 149 --------QANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER---LPQEVKEAYLKQIP------AGRFG 211 (245)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---SCHHHHHHHHHTCT------TCSCB
T ss_pred --------CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh---cCHHHHHHHHhcCC------CCCCc
Confidence 1589999999999998887654 8999999999998764221 11122222322221 23578
Q ss_pred eHHhHHHHHHHhhcCCC--CCc-eEEEecCc
Q 026820 150 HVKDVAKAQVLLFETSA--ASG-RYLCTNGI 177 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~~~ 177 (232)
+++|+|++++.++.... ..| .+++++..
T Consensus 212 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 212 RPEEVAEAVAFLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred CHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence 99999999999986532 345 46776543
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.37 E-value=3.3e-12 Score=99.21 Aligned_cols=146 Identities=21% Similarity=0.163 Sum_probs=98.4
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc----C-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF----G-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||..... ...+.....+++|+.++.++++++... + ..++|++||..+.++.+.
T Consensus 94 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 161 (264)
T 2pd6_A 94 SVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVG------------ 161 (264)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTT------------
T ss_pred eEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCC------------
Confidence 7899999986531 122344678899999999999987653 3 468999999755443211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...|.+.+.++.+ .+++++++|||.++++.... ....+...+..+. ....+
T Consensus 162 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~------~~~~~ 223 (264)
T 2pd6_A 162 ---------QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK---VPQKVVDKITEMI------PMGHL 223 (264)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------CTGGGC------TTCSC
T ss_pred ---------ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh---cCHHHHHHHHHhC------CCCCC
Confidence 158999999999999988766 68999999999999875431 1111111111111 12357
Q ss_pred eeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 149 VHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
++++|+|++++.++... ...| .+.++|.
T Consensus 224 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 254 (264)
T 2pd6_A 224 GDPEDVADVVAFLASEDSGYITGTSVEVTGG 254 (264)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence 89999999999998653 2445 4566654
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.37 E-value=9.5e-12 Score=96.35 Aligned_cols=150 Identities=13% Similarity=0.073 Sum_probs=101.6
Q ss_pred CeEEEeecCCC-CCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNT-LDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~-~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||... ... ........+++|+.++.++++++.. .+..++|++||..+..+.+.
T Consensus 92 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------ 159 (260)
T 3awd_A 92 DILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRP------------ 159 (260)
T ss_dssp CEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS------------
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCC------------
Confidence 79999999765 211 1122367789999999999988764 35679999999744221111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
.+ .+.|+.+|...|.+++.++.+ .+++++++|||.++++...... ....+...+..+.+ ...+
T Consensus 160 -~~------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~------~~~~ 225 (260)
T 3awd_A 160 -QQ------QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGM-EKPELYDAWIAGTP------MGRV 225 (260)
T ss_dssp -SC------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHH-TCHHHHHHHHHTCT------TSSC
T ss_pred -CC------ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhccc-CChHHHHHHHhcCC------cCCC
Confidence 11 148999999999999998876 6899999999999987533100 01223333333322 2357
Q ss_pred eeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 149 VHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
++++|+|++++.++... ...| .+++++.
T Consensus 226 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 256 (260)
T 3awd_A 226 GQPDEVASVVQFLASDAASLMTGAIVNVDAG 256 (260)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHhCchhccCCCcEEEECCc
Confidence 89999999999998653 3356 4677654
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-11 Score=95.42 Aligned_cols=146 Identities=16% Similarity=0.166 Sum_probs=103.8
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++ .+.+..++|++||..+.++.+.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 150 (246)
T 3osu_A 84 DVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPG------------- 150 (246)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC-------------
Confidence 79999999875411 12233568899999999999998 4455569999999866444322
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+.+.++.+ .|+++.+++||.+.++.... ........+..+.+ ...+.
T Consensus 151 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~p------~~r~~ 213 (246)
T 3osu_A 151 --------QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA---LSDELKEQMLTQIP------LARFG 213 (246)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC---SCHHHHHHHHTTCT------TCSCB
T ss_pred --------ChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc---cCHHHHHHHHhcCC------CCCCc
Confidence 158999999999999988763 48999999999998875432 22333344443332 23467
Q ss_pred eHHhHHHHHHHhhcCCC--CCc-eEEEecC
Q 026820 150 HVKDVAKAQVLLFETSA--ASG-RYLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 176 (232)
+.+|++++++.++.... .+| .++++|.
T Consensus 214 ~~~dva~~v~~l~s~~~~~itG~~i~vdgG 243 (246)
T 3osu_A 214 QDTDIANTVAFLASDKAKYITGQTIHVNGG 243 (246)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence 89999999999986543 346 4677653
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.36 E-value=9.1e-13 Score=98.30 Aligned_cols=132 Identities=15% Similarity=0.066 Sum_probs=93.4
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||....... .+.....++.|+.++.++++++.+. + .++|++||..+..+. .
T Consensus 60 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~---------------~ 123 (202)
T 3d7l_A 60 DAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPI---------------V 123 (202)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCC---------------T
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCC---------------C
Confidence 789999997643111 1122466789999999999999876 4 689999997431110 0
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
+ ...|+.+|...|.+++.++.+. +++++++||+.++++.. ....+ ...++++++
T Consensus 124 ~------~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~------------~~~~~------~~~~~~~~~ 179 (202)
T 3d7l_A 124 Q------GASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD------------KLEPF------FEGFLPVPA 179 (202)
T ss_dssp T------CHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH------------HHGGG------STTCCCBCH
T ss_pred c------cHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh------------hhhhh------ccccCCCCH
Confidence 1 1589999999999999887653 89999999999987631 01111 124578999
Q ss_pred HhHHHHHHHhhcCCCCCc-eEEE
Q 026820 152 KDVAKAQVLLFETSAASG-RYLC 173 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~~~~-~~~~ 173 (232)
+|+|++++.++.. ...| .|++
T Consensus 180 ~dva~~~~~~~~~-~~~G~~~~v 201 (202)
T 3d7l_A 180 AKVARAFEKSVFG-AQTGESYQV 201 (202)
T ss_dssp HHHHHHHHHHHHS-CCCSCEEEE
T ss_pred HHHHHHHHHhhhc-cccCceEec
Confidence 9999999988843 3445 4554
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.36 E-value=9.4e-12 Score=95.81 Aligned_cols=148 Identities=18% Similarity=0.153 Sum_probs=99.8
Q ss_pred CeEEEeecCCCCCC-------CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTLDD-------PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~~~-------~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|+|||+||...... ..+..+..+++|+.++.++++++. +.+.+++|++||.++.++.+.
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------- 151 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPG---------- 151 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT----------
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC----------
Confidence 79999999865311 112346778999999987776654 446679999999755322111
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
...|+.+|...|.+.+.++.+. +++++++||+.++++...... ....+...+..+.+ ..
T Consensus 152 -----------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~------~~ 213 (250)
T 2cfc_A 152 -----------RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRL-DQPELRDQVLARIP------QK 213 (250)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHH-TSHHHHHHHHTTCT------TC
T ss_pred -----------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccccc-CCHHHHHHHHhcCC------CC
Confidence 1589999999999999887664 899999999999987532100 01122233333221 22
Q ss_pred CceeHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 147 GAVHVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
.+.+.+|+|++++.++..+. .+|. ++++|.
T Consensus 214 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 246 (250)
T 2cfc_A 214 EIGTAAQVADAVMFLAGEDATYVNGAALVMDGA 246 (250)
T ss_dssp SCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHcCchhhcccCCEEEECCc
Confidence 57899999999999987543 3464 566653
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=7e-12 Score=95.97 Aligned_cols=147 Identities=18% Similarity=0.081 Sum_probs=101.0
Q ss_pred CeEEEeecCCCCCCCC----C----chhhhHHHHHHHHHHHHHHHHHc----C------CCEEEEecccceeccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----D----PEKELLIPAVQGTLNVLEAAKKF----G------VRRVVLTSSISSIVPNPNWPQ 62 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~----~~~~~~~~nv~~~~~l~~~~~~~----~------~~~~i~~Ss~~~~~~~~~~~~ 62 (232)
|+|||+||........ . .....+++|+.++.++++++... + ..++|++||..+..+...
T Consensus 68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--- 144 (242)
T 1uay_A 68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG--- 144 (242)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT---
T ss_pred eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCC---
Confidence 6899999986541111 1 45678899999999999998754 1 128999999854322111
Q ss_pred CCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCC
Q 026820 63 GKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKD 139 (232)
Q Consensus 63 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 139 (232)
...|+.+|...|.+.+.++.+ .|++++++|||.++++..... ...+...+..+.+.
T Consensus 145 ------------------~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~ 203 (242)
T 1uay_A 145 ------------------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQVPF 203 (242)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTCCS
T ss_pred ------------------CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc---chhHHHHHHhhCCC
Confidence 158999999999999888765 389999999999998643221 12222333332221
Q ss_pred ccCCcccCceeHHhHHHHHHHhhcCCCCCc-eEEEecC
Q 026820 140 TQEHYWLGAVHVKDVAKAQVLLFETSAASG-RYLCTNG 176 (232)
Q Consensus 140 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~ 176 (232)
...+++++|+|++++.++......| .+++++.
T Consensus 204 -----~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG 236 (242)
T 1uay_A 204 -----PPRLGRPEEYAALVLHILENPMLNGEVVRLDGA 236 (242)
T ss_dssp -----SCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred -----cccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCC
Confidence 1347899999999999998755667 4666643
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=4.9e-12 Score=97.11 Aligned_cols=148 Identities=16% Similarity=0.108 Sum_probs=99.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc----C-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF----G-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..+++|+.++.++++++... + ..++|++||.....+.+
T Consensus 78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------- 144 (244)
T 3d3w_A 78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT------------- 144 (244)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-------------
T ss_pred CEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC-------------
Confidence 79999999865311 12234678899999999999887643 4 57899999974321100
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
+ .+.|+.+|...|.+++.++.+ .+++++++||+.++++....... .......+..+.+ ...+
T Consensus 145 --~------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~ 209 (244)
T 3d3w_A 145 --N------HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS-DPHKAKTMLNRIP------LGKF 209 (244)
T ss_dssp --T------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSC-STTHHHHHHHTCT------TCSC
T ss_pred --C------CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhcc-ChHHHHHHHhhCC------CCCC
Confidence 1 158999999999999988765 48999999999999864221000 0011222222221 2368
Q ss_pred eeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 149 VHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
++++|+|++++.++... ...| .+++++.
T Consensus 210 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 240 (244)
T 3d3w_A 210 AEVEHVVNAILFLLSDRSGMTTGSTLPVEGG 240 (244)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 89999999999999754 2356 4677653
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=4.4e-12 Score=97.54 Aligned_cols=146 Identities=18% Similarity=0.067 Sum_probs=99.2
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... .........+++|+.++.++++++ .+.+.+++|++||..+.++.+.
T Consensus 87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------- 153 (248)
T 2pnf_A 87 DILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVG------------- 153 (248)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTT-------------
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCC-------------
Confidence 7899999986531 112234578899999997777655 3456679999999755544221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+.+.++.+ .+++++++||+.++++.... ........+....+ ...++
T Consensus 154 --------~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~------~~~~~ 216 (248)
T 2pnf_A 154 --------QVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV---LSEEIKQKYKEQIP------LGRFG 216 (248)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG---SCHHHHHHHHHTCT------TSSCB
T ss_pred --------CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh---ccHHHHHHHHhcCC------CCCcc
Confidence 148999999999999888765 38999999999998875321 11112222222211 23588
Q ss_pred eHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
+++|++++++.++... ...| .+++++.
T Consensus 217 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 246 (248)
T 2pnf_A 217 SPEEVANVVLFLCSELASYITGEVIHVNGG 246 (248)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence 9999999999998653 3345 4666653
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.5e-11 Score=94.12 Aligned_cols=145 Identities=16% Similarity=0.066 Sum_probs=101.2
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++ .+.+..++|++||..+ +.... .
T Consensus 98 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~-~~~~~------------~ 164 (260)
T 3un1_A 98 DSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLV-DQPMV------------G 164 (260)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTT-TSCBT------------T
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhh-ccCCC------------C
Confidence 89999999865411 22234677889999999999987 4556679999999733 21110 0
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
.+ ...|+.||...|.+.+.++.+. |+++.+++||.+.++.... .. ...+.... ....+.
T Consensus 165 ~~------~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---~~---~~~~~~~~------p~~r~~ 226 (260)
T 3un1_A 165 MP------SALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA---ET---HSTLAGLH------PVGRMG 226 (260)
T ss_dssp CC------CHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG---GG---HHHHHTTS------TTSSCB
T ss_pred Cc------cHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH---HH---HHHHhccC------CCCCCc
Confidence 11 1589999999999999998776 8999999999999875432 11 11122221 123577
Q ss_pred eHHhHHHHHHHhhcCCCCCc-eEEEecC
Q 026820 150 HVKDVAKAQVLLFETSAASG-RYLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~~~~-~~~~~~~ 176 (232)
+++|+|++++.+......+| .++++|.
T Consensus 227 ~~~dva~av~~L~~~~~itG~~i~vdGG 254 (260)
T 3un1_A 227 EIRDVVDAVLYLEHAGFITGEILHVDGG 254 (260)
T ss_dssp CHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHhcccCCCCCcEEEECCC
Confidence 89999999999966666677 4677653
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=5.9e-12 Score=97.19 Aligned_cols=150 Identities=17% Similarity=0.153 Sum_probs=98.7
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||........ +..+..+++|+.++.++++++ ++.+.+++|++||..+..+.+.
T Consensus 87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------- 153 (254)
T 2wsb_A 87 SILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRP------------- 153 (254)
T ss_dssp CEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS-------------
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCC-------------
Confidence 7999999986541111 123567889999977777765 3446679999999744222111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
.+ .+.|+.+|...|.+++.++.+. +++++++|||.++++..... .........+....+ ...++
T Consensus 154 ~~------~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~------~~~~~ 220 (254)
T 2wsb_A 154 QF------ASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKM-RERPELFETWLDMTP------MGRCG 220 (254)
T ss_dssp SC------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHH-HTCHHHHHHHHHTST------TSSCB
T ss_pred Cc------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcc-ccChHHHHHHHhcCC------CCCCC
Confidence 11 1589999999999999887664 89999999999987632110 000122233333221 23578
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+++|+|++++.++... ...|. ++++|.
T Consensus 221 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 250 (254)
T 2wsb_A 221 EPSEIAAAALFLASPAASYVTGAILAVDGG 250 (254)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence 9999999999998653 34564 566654
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.2e-11 Score=95.96 Aligned_cols=158 Identities=14% Similarity=-0.018 Sum_probs=101.9
Q ss_pred CeEEEeecCCCC--CCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccc
Q 026820 1 MGVFHLASPNTL--DDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCK 78 (232)
Q Consensus 1 D~Vih~a~~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~ 78 (232)
|+|||+||.... ....+..+..+++|+.++.++++++.....+++|++||.+...+..... ....+..+..+.
T Consensus 88 D~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~--~~~~~~~~~~~~--- 162 (291)
T 3rd5_A 88 DVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLE--DLNWRSRRYSPW--- 162 (291)
T ss_dssp EEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSS--CTTCSSSCCCHH---
T ss_pred CEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcc--cccccccCCCCc---
Confidence 789999998654 2234556789999999999999999888667999999985544432211 111121222222
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHc---C--CcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHh
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEKN---G--TDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKD 153 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 153 (232)
..|+.||...+.+.+.++.+. + +++.+++||.+..+........ . ....... ...+-....+|
T Consensus 163 ---~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~---~-~~~~~~~-----~~~~~~~~~~~ 230 (291)
T 3rd5_A 163 ---LAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK---L-GDALMSA-----ATRVVATDADF 230 (291)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------------CHHHHH
T ss_pred ---chHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH---H-HHHHHHH-----HHHHHhCCHHH
Confidence 589999999999998887653 4 9999999999976543221000 1 1100000 01122345999
Q ss_pred HHHHHHHhhcCCCCCceE-EEec
Q 026820 154 VAKAQVLLFETSAASGRY-LCTN 175 (232)
Q Consensus 154 ~a~~~~~~~~~~~~~~~~-~~~~ 175 (232)
+|++++.++..+..+|.+ .++|
T Consensus 231 ~A~~~~~l~~~~~~~G~~~~vdg 253 (291)
T 3rd5_A 231 GARQTLYAASQDLPGDSFVGPRF 253 (291)
T ss_dssp HHHHHHHHHHSCCCTTCEEEETT
T ss_pred HHHHHHHHHcCCCCCCceeCCcc
Confidence 999999999887777765 4544
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=5.5e-11 Score=92.94 Aligned_cols=145 Identities=19% Similarity=0.122 Sum_probs=99.6
Q ss_pred CeEEEeecCCCCCCCC---------------CchhhhHHHHHHHHHHHHHHHHHc---CC------CEEEEecccceecc
Q 026820 1 MGVFHLASPNTLDDPK---------------DPEKELLIPAVQGTLNVLEAAKKF---GV------RRVVLTSSISSIVP 56 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~---------------~~~~~~~~~nv~~~~~l~~~~~~~---~~------~~~i~~Ss~~~~~~ 56 (232)
|+|||+||........ ...+..+++|+.++.++++++... +. .++|++||..+..+
T Consensus 96 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 175 (276)
T 1mxh_A 96 DVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLP 175 (276)
T ss_dssp CEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSC
T ss_pred CEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCC
Confidence 7999999986541111 334568899999999999998763 33 68999999854322
Q ss_pred CCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHH
Q 026820 57 NPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRL 133 (232)
Q Consensus 57 ~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 133 (232)
.+. ...|+.+|...|.+.+.++.+. |+++++++||.+.++ .. . .......+
T Consensus 176 ~~~---------------------~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~--~--~~~~~~~~ 229 (276)
T 1mxh_A 176 LPG---------------------FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PA--M--PQETQEEY 229 (276)
T ss_dssp CTT---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SS--S--CHHHHHHH
T ss_pred CCC---------------------CeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-cc--C--CHHHHHHH
Confidence 111 1489999999999999887654 899999999999988 21 1 12223333
Q ss_pred HhCCCCccCCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 134 LQGSKDTQEHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 134 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
....+ ..+++.+++|+|++++.++... ..+|. ++++|.
T Consensus 230 ~~~~p-----~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG 270 (276)
T 1mxh_A 230 RRKVP-----LGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG 270 (276)
T ss_dssp HTTCT-----TTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HhcCC-----CCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence 32221 1223889999999999998653 23564 566654
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.1e-11 Score=95.26 Aligned_cols=146 Identities=15% Similarity=0.066 Sum_probs=91.2
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||.... ..........+++|+.++.++++++.. .+..++|++||.++.++.+.
T Consensus 85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------- 151 (247)
T 2hq1_A 85 DILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAG------------- 151 (247)
T ss_dssp CEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------------
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCC-------------
Confidence 799999998643 112344678899999999888887653 46679999999756554321
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+.+.++.+. ++++++++||.+.++.... ........+..+. ....++
T Consensus 152 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~------~~~~~~ 214 (247)
T 2hq1_A 152 --------QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV---LPDKVKEMYLNNI------PLKRFG 214 (247)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---SCHHHHHHHHTTS------TTSSCB
T ss_pred --------CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh---cchHHHHHHHhhC------CCCCCC
Confidence 1589999999999999887653 8999999999987642111 1111222222222 123588
Q ss_pred eHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
+++|+++++..++... ...| .+++++.
T Consensus 215 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 244 (247)
T 2hq1_A 215 TPEEVANVVGFLASDDSNYITGQVINIDGG 244 (247)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence 9999999999988653 2346 4677653
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=5.3e-11 Score=91.60 Aligned_cols=146 Identities=17% Similarity=0.091 Sum_probs=94.1
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||.... ....+.....+++|+.++.++++++. +.+..++|++||..+..+.+.
T Consensus 86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 152 (249)
T 3f9i_A 86 DILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPG------------- 152 (249)
T ss_dssp SEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSC-------------
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCC-------------
Confidence 799999998653 12344567889999999999988874 334568999999755332211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+.+.++.+ .++++.+++||.+.++..... .......+..+. ....+.
T Consensus 153 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~------~~~~~~ 215 (249)
T 3f9i_A 153 --------QANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL---NEKQREAIVQKI------PLGTYG 215 (249)
T ss_dssp --------SHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C---CHHHHHHHHHHC------TTCSCB
T ss_pred --------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc---CHHHHHHHHhcC------CCCCCc
Confidence 158999999999999988765 489999999999987643321 122222222221 133688
Q ss_pred eHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
+++|+|+++..++.... .+|. ++++|.
T Consensus 216 ~~~dva~~~~~l~s~~~~~~tG~~~~vdgG 245 (249)
T 3f9i_A 216 IPEDVAYAVAFLASNNASYITGQTLHVNGG 245 (249)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence 89999999999987543 3564 667654
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.31 E-value=7.5e-12 Score=97.63 Aligned_cols=149 Identities=19% Similarity=0.138 Sum_probs=99.9
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||..... ......+..+++|+.++.++++++... + .++|++||.++.+....
T Consensus 101 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~-------------- 165 (274)
T 1ja9_A 101 DFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIP-------------- 165 (274)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCC--------------
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCC--------------
Confidence 7899999986531 112233678899999999999998765 4 68999999744312111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCC-------C-C-Chh-HHHHHHHHhCCCCc
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQP-------Y-V-NAS-GAVLQRLLQGSKDT 140 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~-------~-~-~~~-~~~~~~~~~~~~~~ 140 (232)
. ...|+.+|...|.+++.++.+. +++++++|||.++++.... . . ... ......+..+.
T Consensus 166 ~------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 236 (274)
T 1ja9_A 166 N------HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN--- 236 (274)
T ss_dssp S------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS---
T ss_pred C------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcC---
Confidence 0 1589999999999999887664 8999999999998753210 0 0 000 12222222222
Q ss_pred cCCcccCceeHHhHHHHHHHhhcCCC--CCc-eEEEecC
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFETSA--ASG-RYLCTNG 176 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 176 (232)
....+++++|+|++++.++.... ..| .+++++.
T Consensus 237 ---~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG 272 (274)
T 1ja9_A 237 ---PLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272 (274)
T ss_dssp ---TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ---CCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence 23468999999999999997543 245 4677654
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.30 E-value=9e-12 Score=95.58 Aligned_cols=146 Identities=15% Similarity=0.094 Sum_probs=99.6
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..+++|+.++.++++++.. .+..++|++||.++.++.+.
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------- 147 (244)
T 1edo_A 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG------------- 147 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT-------------
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCC-------------
Confidence 7899999986531 11223466889999999999988765 35679999999855444221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+.+.++.+ .+++++++|||.++++.... ........+....+ ...++
T Consensus 148 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~------~~~~~ 210 (244)
T 1edo_A 148 --------QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK---LGEDMEKKILGTIP------LGRTG 210 (244)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT---TCHHHHHHHHTSCT------TCSCB
T ss_pred --------CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh---cChHHHHHHhhcCC------CCCCC
Confidence 158999999999998888765 48999999999998764221 11122222222211 23578
Q ss_pred eHHhHHHHHHHhhcCC---CCCc-eEEEecC
Q 026820 150 HVKDVAKAQVLLFETS---AASG-RYLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~---~~~~-~~~~~~~ 176 (232)
+++|+|++++.++..+ ...| .+++++.
T Consensus 211 ~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG 241 (244)
T 1edo_A 211 QPENVAGLVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp CHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCCCccCCcCCCEEEeCCC
Confidence 9999999999988433 2345 4566553
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.2e-11 Score=95.99 Aligned_cols=151 Identities=17% Similarity=0.125 Sum_probs=100.5
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc----C-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF----G-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..+++|+.++.++++++... + ..++|++||..+.++.+.
T Consensus 84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 151 (259)
T 4e6p_A 84 DILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEAL------------ 151 (259)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT------------
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCC------------
Confidence 89999999865411 22334667789999999999987543 2 348999999855332211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc----cCC-
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT----QEH- 143 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~- 143 (232)
...|+.+|...|.+.+.++.+. |+++.+++||.++++... .....+.......... +.+
T Consensus 152 ---------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 218 (259)
T 4e6p_A 152 ---------VAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWD----GVDALFARYENRPRGEKKRLVGEA 218 (259)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHH----HHHHHHHHHHTCCTTHHHHHHHHH
T ss_pred ---------ChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhh----hhhhhhhhhccCChHHHHHHHhcc
Confidence 1589999999999999988654 899999999999987421 1111112111111000 111
Q ss_pred -cccCceeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 144 -YWLGAVHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 144 -~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
....+.+++|+|++++.++... ..+| .++++|.
T Consensus 219 ~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG 255 (259)
T 4e6p_A 219 VPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGG 255 (259)
T ss_dssp STTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred CCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcC
Confidence 2356899999999999988643 3456 4677653
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.30 E-value=1.1e-10 Score=91.02 Aligned_cols=147 Identities=16% Similarity=0.074 Sum_probs=102.1
Q ss_pred CeEEEeecCCCC------CCCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL------DDPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||.... ....+..+..+++|+.++.++++++ .+.+..++|++||..+..+.+.
T Consensus 87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------- 155 (271)
T 3tzq_B 87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDM----------- 155 (271)
T ss_dssp CEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSS-----------
T ss_pred CEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCC-----------
Confidence 799999998633 1112233578899999999999998 5556679999999855322111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...|.+.+.++.+ .|+++.+++||.+.++...... .......+....+ ...
T Consensus 156 ----------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~------~~r 217 (271)
T 3tzq_B 156 ----------STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL--PQPIVDIFATHHL------AGR 217 (271)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC-----CHHHHHHHHTTST------TSS
T ss_pred ----------ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC--CHHHHHHHHhcCC------CCC
Confidence 158999999999999998876 5899999999999987644221 1222233322221 124
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+...+|+|++++.++... ..+|. +.++|.
T Consensus 218 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 218 IGEPHEIAELVCFLASDRAAFITGQVIAADSG 249 (271)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence 678999999999998653 34564 577654
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1.5e-11 Score=95.04 Aligned_cols=148 Identities=13% Similarity=0.061 Sum_probs=99.9
Q ss_pred CeEEEeecC-CCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cC--C---CEEEEecccceeccCCCCCCCCcc
Q 026820 1 MGVFHLASP-NTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FG--V---RRVVLTSSISSIVPNPNWPQGKVI 66 (232)
Q Consensus 1 D~Vih~a~~-~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~---~~~i~~Ss~~~~~~~~~~~~~~~~ 66 (232)
|+|||+||. ..... ..+.....+++|+.++.++++++.. .+ . .++|++||....... .
T Consensus 87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~------- 158 (258)
T 3afn_B 87 DVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG-G------- 158 (258)
T ss_dssp SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC-C-------
T ss_pred CEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC-C-------
Confidence 799999997 33211 1122456789999999999987643 22 2 589999997442201 0
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCC
Q 026820 67 DETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEH 143 (232)
Q Consensus 67 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (232)
.+ ...|+.+|...|.+++.++.+. +++++++||+.++++..... ...+...+..+.+
T Consensus 159 ------~~------~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~----- 218 (258)
T 3afn_B 159 ------PG------AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK---TQDVRDRISNGIP----- 218 (258)
T ss_dssp ------TT------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC---CHHHHHHHHTTCT-----
T ss_pred ------CC------chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc---CHHHHHHHhccCC-----
Confidence 01 1589999999999999887654 89999999999998754321 1233333333322
Q ss_pred cccCceeHHhHHHHHHHhhcCC---CCCc-eEEEecCc
Q 026820 144 YWLGAVHVKDVAKAQVLLFETS---AASG-RYLCTNGI 177 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~~---~~~~-~~~~~~~~ 177 (232)
...+++++|+|++++.++... ...| .+++++..
T Consensus 219 -~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 219 -MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp -TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred -CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 236899999999999998754 3356 46776643
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.28 E-value=2.4e-11 Score=95.45 Aligned_cols=146 Identities=16% Similarity=0.121 Sum_probs=97.8
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+.....+++|+.++.++++++. +.+..++|++||.++.++.+.
T Consensus 123 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------- 189 (285)
T 2c07_A 123 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG------------- 189 (285)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT-------------
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCC-------------
Confidence 79999999865411 122346778999999888877765 446679999999855443221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+.+.++.+ .|++++++|||.+.++.... ........+....+ ...++
T Consensus 190 --------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~------~~~~~ 252 (285)
T 2c07_A 190 --------QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK---ISEQIKKNIISNIP------AGRMG 252 (285)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------CCHHHHHHHHTTCT------TSSCB
T ss_pred --------CchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh---cCHHHHHHHHhhCC------CCCCC
Confidence 158999999999999888765 38999999999998764322 11222222222211 12478
Q ss_pred eHHhHHHHHHHhhcCCC--CCc-eEEEecC
Q 026820 150 HVKDVAKAQVLLFETSA--ASG-RYLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 176 (232)
+++|+|++++.++.... .+| .++++|.
T Consensus 253 ~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG 282 (285)
T 2c07_A 253 TPEEVANLACFLSSDKSGYINGRVFVIDGG 282 (285)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCCCcCCCCCCEEEeCCC
Confidence 99999999999986532 356 4566553
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.28 E-value=4.5e-11 Score=93.76 Aligned_cols=154 Identities=18% Similarity=0.190 Sum_probs=97.3
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++ .+.+..++|++||..+..+.+.
T Consensus 106 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 172 (281)
T 3v2h_A 106 DILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPF------------- 172 (281)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCC-------------
Confidence 79999999865421 22234577899999999999987 3445568999999855332211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCC----CccCCcc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSK----DTQEHYW 145 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 145 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+.++........... ......... ...+...
T Consensus 173 --------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~ 243 (281)
T 3v2h_A 173 --------KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQAR-TRGITEEQVINEVMLKGQPT 243 (281)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----------------------------CCTT
T ss_pred --------chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhh-hcCCCHHHHHHHHHHhcCCC
Confidence 158999999999999988865 389999999999987653321110000 000000000 0011123
Q ss_pred cCceeHHhHHHHHHHhhcCCC--CCc-eEEEecC
Q 026820 146 LGAVHVKDVAKAQVLLFETSA--ASG-RYLCTNG 176 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 176 (232)
..+++++|+|++++.++.... .+| .++++|.
T Consensus 244 ~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG 277 (281)
T 3v2h_A 244 KKFITVEQVASLALYLAGDDAAQITGTHVSMDGG 277 (281)
T ss_dssp CSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTT
T ss_pred CCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCC
Confidence 468999999999999986543 456 4566653
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.27 E-value=6.1e-11 Score=94.88 Aligned_cols=159 Identities=19% Similarity=0.063 Sum_probs=97.5
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+.....+++|+.|+.++++++ ++.+..++|++||.++..+...
T Consensus 89 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~------------- 155 (324)
T 3u9l_A 89 DVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPP------------- 155 (324)
T ss_dssp SEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCS-------------
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCC-------------
Confidence 79999999864311 12233567899999999999998 5556679999999854322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCC---CChhHHHHHHHHhCCCCccCC---
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPY---VNASGAVLQRLLQGSKDTQEH--- 143 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~--- 143 (232)
....|+.||...|.+.+.++.+ .|+++++++||.+.++..... ...................++
T Consensus 156 -------~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (324)
T 3u9l_A 156 -------YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIK 228 (324)
T ss_dssp -------SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHH
T ss_pred -------cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHH
Confidence 0148999999999999998876 589999999999976542210 011111111111111111111
Q ss_pred -----cccCceeHHhHHHHHHHhhcCCCCCc--eEEEecCccc
Q 026820 144 -----YWLGAVHVKDVAKAQVLLFETSAASG--RYLCTNGIYQ 179 (232)
Q Consensus 144 -----~~~~~i~v~D~a~~~~~~~~~~~~~~--~~~~~~~~~s 179 (232)
...+..+++|+|++++.++..+.... ++.+++....
T Consensus 229 ~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~ 271 (324)
T 3u9l_A 229 KAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDG 271 (324)
T ss_dssp HHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCS
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchH
Confidence 01123689999999999998774322 4566543333
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.8e-11 Score=95.06 Aligned_cols=149 Identities=15% Similarity=0.114 Sum_probs=98.5
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++. +.+..++|++||.++..+.+
T Consensus 87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------- 152 (263)
T 3ai3_A 87 DILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLW-------------- 152 (263)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC--------------
Confidence 79999999865311 122345778999999999988874 34667999999974422111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCC--------hhHHHHHHHHhC-CCCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVN--------ASGAVLQRLLQG-SKDT 140 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~--------~~~~~~~~~~~~-~~~~ 140 (232)
+ ...|+.+|...|.+.+.++.+ .|++++++|||.++++....... ........+... .
T Consensus 153 -~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 222 (263)
T 3ai3_A 153 -Y------EPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHA--- 222 (263)
T ss_dssp -T------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHC---
T ss_pred -C------cchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCC---
Confidence 1 148999999999999988765 58999999999998863211000 001111222111 1
Q ss_pred cCCcccCceeHHhHHHHHHHhhcCCC--CCc-eEEEecC
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFETSA--ASG-RYLCTNG 176 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 176 (232)
....+++++|+|++++.++.... .+| .++++|.
T Consensus 223 ---p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG 258 (263)
T 3ai3_A 223 ---PIKRFASPEELANFFVFLCSERATYSVGSAYFVDGG 258 (263)
T ss_dssp ---TTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred ---CCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence 12358899999999999986543 346 4677653
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.27 E-value=9.5e-11 Score=92.09 Aligned_cols=148 Identities=14% Similarity=0.078 Sum_probs=99.8
Q ss_pred CeEEEeecCCCC--------CCCCCchhhhHHHHHHHHHHHHHHHHHcC---CCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTL--------DDPKDPEKELLIPAVQGTLNVLEAAKKFG---VRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|+|||+||.... ....+..+..+++|+.++.++++++...- -.++|++||.+...+.+.
T Consensus 101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 170 (285)
T 2p91_A 101 DIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPH---------- 170 (285)
T ss_dssp CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTT----------
T ss_pred CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCC----------
Confidence 799999998642 11222346788999999999999987642 258999999744322111
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
...|+.+|...|.+.+.++.+. |+++++++||.+.++..... .........+....+ ..
T Consensus 171 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~p------~~ 232 (285)
T 2p91_A 171 -----------YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI-TGFHLLMEHTTKVNP------FG 232 (285)
T ss_dssp -----------TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C-TTHHHHHHHHHHHST------TS
T ss_pred -----------ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc-cchHHHHHHHHhcCC------CC
Confidence 1489999999999999887653 89999999999998754321 112222232222221 12
Q ss_pred CceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 147 GAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
.+.+++|+|++++.++... ..+|. +++++.
T Consensus 233 ~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg 265 (285)
T 2p91_A 233 KPITIEDVGDTAVFLCSDWARAITGEVVHVDNG 265 (285)
T ss_dssp SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence 3678999999999998643 23564 566654
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.26 E-value=3.9e-11 Score=93.15 Aligned_cols=146 Identities=18% Similarity=0.109 Sum_probs=100.5
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEeccccee-ccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSI-VPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~-~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..+++|+.++.++++++... +..++|++||.... .+.+
T Consensus 90 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------- 156 (262)
T 3pk0_A 90 DVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYP------------- 156 (262)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCC-------------
Confidence 79999999865411 12233566899999999999887653 66799999997432 1111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
....|+.+|...|.+.+.++.+ .|+++.+++||.+.++..... .......+....+ ...+
T Consensus 157 --------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~r~ 219 (262)
T 3pk0_A 157 --------GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN---GEEYIASMARSIP------AGAL 219 (262)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT---CHHHHHHHHTTST------TSSC
T ss_pred --------CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc---CHHHHHHHHhcCC------CCCC
Confidence 1158999999999999998876 589999999999987642211 1223333333321 1246
Q ss_pred eeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
...+|+|++++.++... ..+|. +.++|.
T Consensus 220 ~~p~dva~~v~~L~s~~~~~itG~~i~vdGG 250 (262)
T 3pk0_A 220 GTPEDIGHLAAFLATKEAGYITGQAIAVDGG 250 (262)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 78999999999998653 35664 567653
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.26 E-value=5.9e-11 Score=92.60 Aligned_cols=147 Identities=17% Similarity=0.120 Sum_probs=94.6
Q ss_pred CeEEEeecCCCC-C----CCCCchhhhHHHHHHHHHHHHHHHHHc-------CCCEEEEecccceeccCCCCCCCCccCC
Q 026820 1 MGVFHLASPNTL-D----DPKDPEKELLIPAVQGTLNVLEAAKKF-------GVRRVVLTSSISSIVPNPNWPQGKVIDE 68 (232)
Q Consensus 1 D~Vih~a~~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~~~~-------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E 68 (232)
|+|||+||.... . ...+.....+++|+.++.++++++... +..++|++||.++.++....
T Consensus 106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-------- 177 (272)
T 4e3z_A 106 DGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQ-------- 177 (272)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTT--------
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCC--------
Confidence 799999998653 1 122334678899999999999887543 23589999998665443211
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcc
Q 026820 69 TSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (232)
...|+.+|...|.+.+.++.+. |+++++++||.+.++..... ........+..+. ..
T Consensus 178 ------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~------~~ 237 (272)
T 4e3z_A 178 ------------YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG--GLPDRAREMAPSV------PM 237 (272)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------CC------TT
T ss_pred ------------cchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc--CChHHHHHHhhcC------Cc
Confidence 1479999999999999887754 89999999999987653321 1111222222221 12
Q ss_pred cCceeHHhHHHHHHHhhcCC--CCCc-eEEEec
Q 026820 146 LGAVHVKDVAKAQVLLFETS--AASG-RYLCTN 175 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~ 175 (232)
..+.+++|+|++++.++... ..+| .++++|
T Consensus 238 ~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdg 270 (272)
T 4e3z_A 238 QRAGMPEEVADAILYLLSPSASYVTGSILNVSG 270 (272)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCcCHHHHHHHHHHHhCCccccccCCEEeecC
Confidence 24678999999999998643 2446 466665
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.26 E-value=7.9e-11 Score=90.77 Aligned_cols=154 Identities=12% Similarity=0.097 Sum_probs=91.0
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++ ++.+..++|++||.++..+.+
T Consensus 76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-------------- 141 (250)
T 2fwm_X 76 DALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRI-------------- 141 (250)
T ss_dssp CEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT--------------
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCC--------------
Confidence 79999999865411 12234678899999999999988 344567999999974422111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHH-HHHhC-CCCccCCcccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQ-RLLQG-SKDTQEHYWLG 147 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~ 147 (232)
+ ...|+.+|...|.+.+.++.+ .|++++++|||.+.++...... ....... .+... ...........
T Consensus 142 -~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~ 213 (250)
T 2fwm_X 142 -G------MSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLW-VSDDAEEQRIRGFGEQFKLGIPLGK 213 (250)
T ss_dssp -T------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------------
T ss_pred -C------CchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccc-cChhHHHHHHhhhhhcccccCCCCC
Confidence 1 158999999999999988765 3899999999999887532210 0000001 11000 00000001124
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+.+.+|+|++++.++... ..+|. +.++|.
T Consensus 214 ~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 245 (250)
T 2fwm_X 214 IARPQEIANTILFLASDLASHITLQDIVVDGG 245 (250)
T ss_dssp --CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 788999999999998653 34564 566553
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.26 E-value=2.6e-11 Score=95.04 Aligned_cols=154 Identities=20% Similarity=0.152 Sum_probs=100.5
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..+++|+.++.++++++.. .+ ..++|++||..+..+.+.
T Consensus 107 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 174 (280)
T 3pgx_A 107 DVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPG------------ 174 (280)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCCC------------
Confidence 79999999876411 2223456788999999999988743 23 358999999855322111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHh-CCCC-ccCCccc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQ-GSKD-TQEHYWL 146 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~ 146 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+.++..... .....+..... .... .......
T Consensus 175 ---------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 243 (280)
T 3pgx_A 175 ---------NGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE--AMMEIFARHPSFVHSFPPMPVQPN 243 (280)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH--HHHHHHHHCGGGGGGSCCBTTBCS
T ss_pred ---------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh--hhhhhhhcCchhhhhhhhcccCCC
Confidence 158999999999999998876 589999999999988753210 11111111000 0000 1111222
Q ss_pred CceeHHhHHHHHHHhhcCCC--CCce-EEEecCc
Q 026820 147 GAVHVKDVAKAQVLLFETSA--ASGR-YLCTNGI 177 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~~ 177 (232)
.+++++|+|++++.++.... .+|. ++++|..
T Consensus 244 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 244 GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 48899999999999986543 4564 6776643
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.8e-11 Score=93.65 Aligned_cols=147 Identities=18% Similarity=0.135 Sum_probs=99.0
Q ss_pred CeEEEeecCCCCCC--------CCCchhhhHHHHHHHHHHHHHHHHHc----------CCCEEEEecccceeccCCCCCC
Q 026820 1 MGVFHLASPNTLDD--------PKDPEKELLIPAVQGTLNVLEAAKKF----------GVRRVVLTSSISSIVPNPNWPQ 62 (232)
Q Consensus 1 D~Vih~a~~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~~~~i~~Ss~~~~~~~~~~~~ 62 (232)
|++||+||...... ..+.....+++|+.++.++++++... +..++|++||.++..+.+.
T Consensus 83 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~--- 159 (257)
T 3tpc_A 83 HGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIG--- 159 (257)
T ss_dssp CEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT---
T ss_pred CEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCC---
Confidence 79999999875411 12334677899999999999998653 3357999999865443221
Q ss_pred CCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCC
Q 026820 63 GKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKD 139 (232)
Q Consensus 63 ~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~ 139 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+.++..... .......+....+
T Consensus 160 ------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~p- 217 (257)
T 3tpc_A 160 ------------------QAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGM---PQDVQDALAASVP- 217 (257)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------CCSS-
T ss_pred ------------------CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC---CHHHHHHHHhcCC-
Confidence 158999999999999888876 589999999999987643211 1111111111111
Q ss_pred ccCCcccCceeHHhHHHHHHHhhcCCCCCce-EEEecC
Q 026820 140 TQEHYWLGAVHVKDVAKAQVLLFETSAASGR-YLCTNG 176 (232)
Q Consensus 140 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~~ 176 (232)
....+.+.+|++++++.++.....+|. +.++|.
T Consensus 218 ----~~~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG 251 (257)
T 3tpc_A 218 ----FPPRLGRAEEYAALVKHICENTMLNGEVIRLDGA 251 (257)
T ss_dssp ----SSCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred ----CCCCCCCHHHHHHHHHHHcccCCcCCcEEEECCC
Confidence 113578999999999999987667774 566653
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.7e-10 Score=90.38 Aligned_cols=151 Identities=18% Similarity=0.142 Sum_probs=100.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..+..+..+++|+.++.++++++. +.+..++|++||..+..+...
T Consensus 101 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 167 (281)
T 3s55_A 101 DIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFA------------- 167 (281)
T ss_dssp CEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTT-------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCC-------------
Confidence 89999999875411 222346778899999999999863 345568999999854322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC----------ChhHHHHHHHHhCCCC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV----------NASGAVLQRLLQGSKD 139 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~----------~~~~~~~~~~~~~~~~ 139 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.++++...... .............
T Consensus 168 --------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 236 (281)
T 3s55_A 168 --------QASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFAS--- 236 (281)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHH---
T ss_pred --------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHh---
Confidence 158999999999999998875 4899999999999987643210 0000000000000
Q ss_pred ccCCcccCceeHHhHHHHHHHhhcCCC--CCc-eEEEecC
Q 026820 140 TQEHYWLGAVHVKDVAKAQVLLFETSA--ASG-RYLCTNG 176 (232)
Q Consensus 140 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 176 (232)
.......+.+++|+|++++.++.... .+| .++++|.
T Consensus 237 -~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG 275 (281)
T 3s55_A 237 -LHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG 275 (281)
T ss_dssp -HCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -hhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence 01122578999999999999997543 456 4677653
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.4e-10 Score=89.72 Aligned_cols=149 Identities=15% Similarity=0.034 Sum_probs=97.6
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH-----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK-----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||..... ...+..+..+++|+.++.++++++. +.+..++|++||..+..+.+.
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 152 (257)
T 3imf_A 85 DILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPG------------ 152 (257)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTT------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCC------------
Confidence 7999999975431 1122345778999999999999873 334568999999755322111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+.++...........+...+.... ....
T Consensus 153 ---------~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------p~~r 217 (257)
T 3imf_A 153 ---------VIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSV------PLGR 217 (257)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTS------TTCS
T ss_pred ---------cHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcC------CCCC
Confidence 148999999999998887743 489999999999988753321100111111111111 1224
Q ss_pred ceeHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
+...+|+|++++.++.... .+|. +.++|.
T Consensus 218 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 249 (257)
T 3imf_A 218 LGTPEEIAGLAYYLCSDEAAYINGTCMTMDGG 249 (257)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence 7889999999999986543 4564 566653
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=6.7e-11 Score=91.78 Aligned_cols=146 Identities=16% Similarity=0.060 Sum_probs=97.6
Q ss_pred CeEEEeecCCCCCC----------CCCchhhhHHHHHHHHHHHHHHHHHc----------CCCEEEEecccceeccCCCC
Q 026820 1 MGVFHLASPNTLDD----------PKDPEKELLIPAVQGTLNVLEAAKKF----------GVRRVVLTSSISSIVPNPNW 60 (232)
Q Consensus 1 D~Vih~a~~~~~~~----------~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~~~~i~~Ss~~~~~~~~~~ 60 (232)
|+|||+||...... ..+.....+++|+.++.++++++... +..++|++||..+..+.+.
T Consensus 88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~- 166 (265)
T 2o23_A 88 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG- 166 (265)
T ss_dssp CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT-
T ss_pred CEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCC-
Confidence 79999999865411 12234678899999999999998754 4568999999754322111
Q ss_pred CCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCC
Q 026820 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGS 137 (232)
Q Consensus 61 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 137 (232)
...|+.+|...|.+.+.++.+ .++++++++||.+.++..... .......+....
T Consensus 167 --------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~ 223 (265)
T 2o23_A 167 --------------------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL---PEKVCNFLASQV 223 (265)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHTC
T ss_pred --------------------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc---CHHHHHHHHHcC
Confidence 158999999999998888765 489999999999977642210 000111111111
Q ss_pred CCccCCcccCceeHHhHHHHHHHhhcCCCCCce-EEEec
Q 026820 138 KDTQEHYWLGAVHVKDVAKAQVLLFETSAASGR-YLCTN 175 (232)
Q Consensus 138 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~ 175 (232)
+ . ...+++++|+|++++.++.....+|. +.++|
T Consensus 224 ~--~---~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdg 257 (265)
T 2o23_A 224 P--F---PSRLGDPAEYAHLVQAIIENPFLNGEVIRLDG 257 (265)
T ss_dssp S--S---SCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred C--C---cCCCCCHHHHHHHHHHHhhcCccCceEEEECC
Confidence 1 1 12478999999999999977666774 56654
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.25 E-value=8.6e-12 Score=97.86 Aligned_cols=163 Identities=19% Similarity=0.161 Sum_probs=108.0
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ....+..+..+++|+.++.++++++... +-.++|++||.++..+.+.
T Consensus 93 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 160 (281)
T 3svt_A 93 HGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRW------------ 160 (281)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT------------
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCC------------
Confidence 799999997332 1112233568899999999999987543 3348999999855332211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.||...|.+.+.++.+. ++++.+++||.+.++..... .........+....+ ...+
T Consensus 161 ---------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~p------~~r~ 224 (281)
T 3svt_A 161 ---------FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI-TESAELSSDYAMCTP------LPRQ 224 (281)
T ss_dssp ---------CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-HTCHHHHHHHHHHCS------SSSC
T ss_pred ---------ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc-ccCHHHHHHHHhcCC------CCCC
Confidence 1489999999999999988654 69999999999987642110 001112222222221 2356
Q ss_pred eeHHhHHHHHHHhhcCCC--CCc-eEEEec-Cccc-HHHHHHHHHhhC
Q 026820 149 VHVKDVAKAQVLLFETSA--ASG-RYLCTN-GIYQ-FAEFAEKVSKLF 191 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~--~~~-~~~~~~-~~~s-~~el~~~i~~~~ 191 (232)
.+++|+|++++.++.... .+| .++++| ..++ ..++.+.+.+.+
T Consensus 225 ~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~ 272 (281)
T 3svt_A 225 GEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVF 272 (281)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhcccccc
Confidence 789999999999986533 356 467764 4444 667777777666
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.24 E-value=4e-11 Score=92.10 Aligned_cols=141 Identities=15% Similarity=0.057 Sum_probs=91.3
Q ss_pred CeEEEeecCCC-C----CCCCCchhhhHHHHHHHHHHHHHHHHHc----------C-----CCEEEEecccceeccCCCC
Q 026820 1 MGVFHLASPNT-L----DDPKDPEKELLIPAVQGTLNVLEAAKKF----------G-----VRRVVLTSSISSIVPNPNW 60 (232)
Q Consensus 1 D~Vih~a~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----------~-----~~~~i~~Ss~~~~~~~~~~ 60 (232)
|+|||+||... . ..........+++|+.++.++++++... + ..++|++||..+.++...
T Consensus 83 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~- 161 (250)
T 1yo6_A 83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT- 161 (250)
T ss_dssp CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC-
T ss_pred cEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcc-
Confidence 79999999876 2 1112234677899999999999887543 3 579999999855333211
Q ss_pred CCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCC
Q 026820 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGS 137 (232)
Q Consensus 61 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 137 (232)
+..+..+ ...|+.+|...|.+++.++.+. +++++++|||.+.++....
T Consensus 162 -------~~~~~~~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------------- 212 (250)
T 1yo6_A 162 -------SGSAQFP------VLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK---------------- 212 (250)
T ss_dssp -------STTSSSC------BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------
T ss_pred -------cccccCC------ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----------------
Confidence 1111112 2589999999999999988764 8999999999986543110
Q ss_pred CCccCCcccCceeHHhHHHHHHHhhcCCC--CCceEE-EecCccc
Q 026820 138 KDTQEHYWLGAVHVKDVAKAQVLLFETSA--ASGRYL-CTNGIYQ 179 (232)
Q Consensus 138 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~~-~~~~~~s 179 (232)
..+++.+|+|+.++.++.... ..|.|+ +.+..++
T Consensus 213 --------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~~ 249 (250)
T 1yo6_A 213 --------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE 249 (250)
T ss_dssp --------------HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred --------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcCCC
Confidence 136789999999999997654 356553 3444443
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=8.2e-11 Score=91.12 Aligned_cols=148 Identities=16% Similarity=0.054 Sum_probs=97.7
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||..... ......+..+++|+.++.++++++.. .+ ..++|++||.....+.
T Consensus 87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------- 152 (261)
T 1gee_A 87 DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW-------------- 152 (261)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC--------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC--------------
Confidence 7999999986541 11223457889999999998887654 23 5699999997442111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
.+ ...|+.+|...|.+.+.++.+. +++++++|||.++++..... .........+....+ ...+
T Consensus 153 -~~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~------~~~~ 218 (261)
T 1gee_A 153 -PL------FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEK-FADPEQRADVESMIP------MGYI 218 (261)
T ss_dssp -TT------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH-HHSHHHHHHHHTTCT------TSSC
T ss_pred -CC------ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhc-ccChhHHHHHHhcCC------CCCC
Confidence 11 1589999999999988877653 89999999999988642110 001112222222211 2357
Q ss_pred eeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 149 VHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
++++|+|++++.++... ..+| .+++++.
T Consensus 219 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 249 (261)
T 1gee_A 219 GEPEEIAAVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCccccCCCCcEEEEcCC
Confidence 89999999999998643 3456 4566654
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=4.9e-11 Score=92.12 Aligned_cols=141 Identities=15% Similarity=0.098 Sum_probs=96.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc----C---CCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF----G---VRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~---~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||..+ .+..+..+++|+.++.++++++... + ..++|++||.++..+.+.
T Consensus 86 d~lv~~Ag~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 147 (254)
T 1sby_A 86 DILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ-------------- 147 (254)
T ss_dssp CEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------
T ss_pred CEEEECCccCC----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCC--------------
Confidence 79999999864 4567899999999999999998642 1 247999999744221110
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChh--HHHHHHHHhCCCCccCCcccCc
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNAS--GAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...|.+.+.++.+ .++++++++||.+.++......... ......... ...+
T Consensus 148 -------~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~ 211 (254)
T 1sby_A 148 -------VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL---------SHPT 211 (254)
T ss_dssp -------SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT---------TSCC
T ss_pred -------chHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh---------cCCC
Confidence 158999999999999988765 5899999999999875321100000 000111111 1235
Q ss_pred eeHHhHHHHHHHhhcCCCCCc-eEEEecC
Q 026820 149 VHVKDVAKAQVLLFETSAASG-RYLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~~~-~~~~~~~ 176 (232)
.+++|+|++++.++... .+| .+.++|.
T Consensus 212 ~~~~dvA~~i~~~~~~~-~~G~~~~v~gG 239 (254)
T 1sby_A 212 QTSEQCGQNFVKAIEAN-KNGAIWKLDLG 239 (254)
T ss_dssp EEHHHHHHHHHHHHHHC-CTTCEEEEETT
T ss_pred CCHHHHHHHHHHHHHcC-CCCCEEEEeCC
Confidence 58999999999988643 445 5677653
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.24 E-value=5.4e-11 Score=92.91 Aligned_cols=148 Identities=16% Similarity=0.102 Sum_probs=100.6
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++. +.+..++|++||..+..+.+.
T Consensus 108 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~------------- 174 (273)
T 3uf0_A 108 DVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRN------------- 174 (273)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSS-------------
T ss_pred cEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCC-------------
Confidence 89999999876411 122346788999999999999873 345568999999855322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+.++..... .........+....+ ...+.
T Consensus 175 --------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~~r~~ 239 (273)
T 3uf0_A 175 --------VAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL-RADDERAAEITARIP------AGRWA 239 (273)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-HTSHHHHHHHHHHST------TSSCB
T ss_pred --------ChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc-ccCHHHHHHHHhcCC------CCCCC
Confidence 158999999999999998876 589999999999987642110 001122222222221 23578
Q ss_pred eHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
.++|+|++++.++.. ...+|. ++++|.
T Consensus 240 ~pedva~~v~~L~s~~a~~itG~~i~vdGG 269 (273)
T 3uf0_A 240 TPEDMVGPAVFLASDAASYVHGQVLAVDGG 269 (273)
T ss_dssp CGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence 899999999999865 335664 567653
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=5.5e-11 Score=92.24 Aligned_cols=148 Identities=14% Similarity=0.071 Sum_probs=100.3
Q ss_pred CeEEEeecCCCC--------CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL--------DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||.... ....+..+..+++|+.++.++++++... .-.++|++||.++..+.+.
T Consensus 88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 156 (261)
T 2wyu_A 88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK----------- 156 (261)
T ss_dssp EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT-----------
T ss_pred CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCC-----------
Confidence 789999997541 1122334678899999999999999765 1248999999744222111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...|.+.+.++.+. |+++++++||.++++..... .........+....+ ...
T Consensus 157 ----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~p------~~~ 219 (261)
T 2wyu_A 157 ----------YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI-PGFTKMYDRVAQTAP------LRR 219 (261)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC-TTHHHHHHHHHHHST------TSS
T ss_pred ----------chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc-cccHHHHHHHHhcCC------CCC
Confidence 1489999999999999887664 89999999999998753221 112222233322221 124
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 148 AVHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
+.+++|+|++++.++... ..+| .+++++.
T Consensus 220 ~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG 251 (261)
T 2wyu_A 220 NITQEEVGNLGLFLLSPLASGITGEVVYVDAG 251 (261)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence 678999999999998643 2356 4667654
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.3e-10 Score=90.95 Aligned_cols=147 Identities=18% Similarity=0.113 Sum_probs=96.1
Q ss_pred CeEEEeecCCCC-CCCC-----CchhhhHHHHHHH----HHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL-DDPK-----DPEKELLIPAVQG----TLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~-~~~~-----~~~~~~~~~nv~~----~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||.... .... +.....+++|+.+ +++++..+++.+.+++|++||.++..+.
T Consensus 113 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------- 179 (279)
T 3ctm_A 113 DVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN------------- 179 (279)
T ss_dssp SEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC--------------
T ss_pred CEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC-------------
Confidence 799999997643 1111 1235678899999 5677777777777899999997442210
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
+..+ ...|+.+|...|.+++.++.+. + ++++++||.+.++..... .......+....+ ...
T Consensus 180 ~~~~------~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~p------~~~ 243 (279)
T 3ctm_A 180 IPQL------QAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA---SKDMKAKWWQLTP------LGR 243 (279)
T ss_dssp --CC------HHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC---CHHHHHHHHHHST------TCS
T ss_pred CCCC------cccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc---ChHHHHHHHHhCC------ccC
Confidence 0011 2589999999999999988763 6 899999999987643211 1122222221111 124
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 148 AVHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
+++++|+|++++.++... ..+| .++++|.
T Consensus 244 ~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG 275 (279)
T 3ctm_A 244 EGLTQELVGGYLYLASNASTFTTGSDVVIDGG 275 (279)
T ss_dssp CBCGGGTHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 789999999999998653 3456 4566653
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.7e-10 Score=89.45 Aligned_cols=144 Identities=17% Similarity=0.099 Sum_probs=95.9
Q ss_pred CeEEEeecCCCCCCCCCch---hhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDPKDPE---KELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~---~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||.........+. ...+++|+.++.++++++.. .+..++|++||..+..+.+.
T Consensus 101 D~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~-------------- 166 (260)
T 3gem_A 101 RAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSK-------------- 166 (260)
T ss_dssp SEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSS--------------
T ss_pred CEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCC--------------
Confidence 7999999986652222222 46789999999999988753 35568999999855332211
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
...|+.+|...|.+.+.++.+. ++++.+++||.+..+.... ......+....+ ..-+..+
T Consensus 167 -------~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~-----~~~~~~~~~~~p------~~r~~~~ 228 (260)
T 3gem_A 167 -------HIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDD-----AAYRANALAKSA------LGIEPGA 228 (260)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--------------------CC------SCCCCCT
T ss_pred -------cHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCC-----HHHHHHHHhcCC------CCCCCCH
Confidence 1589999999999999988765 5999999999997653221 111112222211 1235568
Q ss_pred HhHHHHHHHhhcCCCCCce-EEEecC
Q 026820 152 KDVAKAQVLLFETSAASGR-YLCTNG 176 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~~~~~-~~~~~~ 176 (232)
+|+|++++.++.....+|. ++++|.
T Consensus 229 edva~~v~~L~~~~~itG~~i~vdGG 254 (260)
T 3gem_A 229 EVIYQSLRYLLDSTYVTGTTLTVNGG 254 (260)
T ss_dssp HHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred HHHHHHHHHHhhCCCCCCCEEEECCC
Confidence 9999999999977777774 677653
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.23 E-value=5.5e-11 Score=92.23 Aligned_cols=153 Identities=18% Similarity=0.212 Sum_probs=100.5
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc----C-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF----G-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+.....+++|+.++.++++++... + ..++|++||..+.++... +..+
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------~~~~ 165 (265)
T 1h5q_A 94 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS--------SLNG 165 (265)
T ss_dssp EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE--------ETTE
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc--------cccc
Confidence 68999999865411 12234567899999999999987543 3 368999999754332211 0011
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
. .+...|+.+|...|.+++.++.+ .+++++++|||.++++..... .......+....+ ...+
T Consensus 166 ~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~------~~~~ 230 (265)
T 1h5q_A 166 S------LTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNIP------LNRF 230 (265)
T ss_dssp E------CSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTCT------TSSC
T ss_pred c------ccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc---chhHHHHHHhcCc------ccCC
Confidence 1 11258999999999999988765 389999999999987653221 1122222222221 1247
Q ss_pred eeHHhHHHHHHHhhcCCC--CCc-eEEEecC
Q 026820 149 VHVKDVAKAQVLLFETSA--ASG-RYLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 176 (232)
++++|+|++++.++.... ..| .+++++.
T Consensus 231 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 261 (265)
T 1h5q_A 231 AQPEEMTGQAILLLSDHATYMTGGEYFIDGG 261 (265)
T ss_dssp BCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred CCHHHHHHHHHhhccCchhcCcCcEEEecCC
Confidence 899999999999986542 456 4667654
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.4e-10 Score=89.78 Aligned_cols=148 Identities=18% Similarity=0.069 Sum_probs=100.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++. +.+..++|++||.+...+.+.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------- 150 (258)
T 3oid_A 84 DVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLEN------------- 150 (258)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCC-------------
Confidence 79999999755411 122235678999999999998874 345569999999754322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+. ++++.+++||.+..+..... .........+....+ ...+.
T Consensus 151 --------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~~r~~ 215 (258)
T 3oid_A 151 --------YTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHF-PNREDLLEDARQNTP------AGRMV 215 (258)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGC-TTHHHHHHHHHHHCT------TSSCB
T ss_pred --------cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhc-ccCHHHHHHHHhcCC------CCCCc
Confidence 1589999999999999988764 89999999999987643221 111222333322221 23578
Q ss_pred eHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
+++|+|++++.++... ..+| .++++|.
T Consensus 216 ~~~dva~~v~~L~s~~~~~itG~~i~vdGG 245 (258)
T 3oid_A 216 EIKDMVDTVEFLVSSKADMIRGQTIIVDGG 245 (258)
T ss_dssp CHHHHHHHHHHHTSSTTTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence 8999999999998754 3456 4677653
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.3e-10 Score=88.04 Aligned_cols=149 Identities=16% Similarity=0.050 Sum_probs=101.5
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHHcC--CCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKKFG--VRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|++||+||.... ....+..+..+++|+.++.++++++...- -.++|++||.....+.+.
T Consensus 61 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------------- 126 (223)
T 3uce_A 61 DHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVAN-------------- 126 (223)
T ss_dssp EEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTT--------------
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCC--------------
Confidence 789999998632 11122345678999999999999997651 238999999744221111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHcC-CcEEEEcCCCeeCCCCCCCCCh-hHHHHHHHHhCCCCccCCcccCceeH
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKNG-TDVVAIHPATSLGPFPQPYVNA-SGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-~~~~ilR~~~i~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
...|+.+|...|.+.+.++.+.+ +++.+++||.+.++........ ...+...+....+ ...+.++
T Consensus 127 -------~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 193 (223)
T 3uce_A 127 -------TYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP------VGKVGEA 193 (223)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST------TCSCBCH
T ss_pred -------chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC------CCCccCH
Confidence 15899999999999999887764 9999999999987643321111 1112222222221 2357789
Q ss_pred HhHHHHHHHhhcCCCCCce-EEEecC
Q 026820 152 KDVAKAQVLLFETSAASGR-YLCTNG 176 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~~~~~-~~~~~~ 176 (232)
+|+|++++.++.....+|. ++++|.
T Consensus 194 ~dvA~~~~~l~~~~~~tG~~i~vdgG 219 (223)
T 3uce_A 194 SDIAMAYLFAIQNSYMTGTVIDVDGG 219 (223)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred HHHHHHHHHHccCCCCCCcEEEecCC
Confidence 9999999999987766774 566653
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=9.6e-11 Score=90.52 Aligned_cols=167 Identities=14% Similarity=0.064 Sum_probs=96.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCC-CCccCCCCCCCcc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQ-GKVIDETSWTDLD 75 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~-~~~~~E~~~~~~~ 75 (232)
|+|||+||.... ..+.+..+++|+.++.++++++. +.+..++|++||.++..+....+. .....+.+.....
T Consensus 64 d~lv~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (257)
T 1fjh_A 64 DGLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKAR 140 (257)
T ss_dssp SEEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHH
T ss_pred CEEEECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhh
Confidence 799999998652 24578999999999999999886 345579999999854321110000 0000000000000
Q ss_pred ------cccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 76 ------FCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 76 ------~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
.+.+....|+.||...|.+.+.++.+ .|+++++++||.+.++...... .......+... +.....
T Consensus 141 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~----~~~~~~ 214 (257)
T 1fjh_A 141 AIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL--QDPRYGESIAK----FVPPMG 214 (257)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------------CCCSTT
T ss_pred hhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhc--cchhHHHHHHh----cccccC
Confidence 00112358999999999999887765 5899999999999876432110 00011111110 011112
Q ss_pred CceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 147 GAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
.+++++|+|++++.++..+ ..+|. +.++|.
T Consensus 215 ~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG 247 (257)
T 1fjh_A 215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCCCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence 4789999999999998754 34564 566654
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.8e-10 Score=90.19 Aligned_cols=157 Identities=17% Similarity=0.125 Sum_probs=104.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCCCCcc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLD 75 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~ 75 (232)
|+|||+||........+.....+++|+.++.++++++.. .+ ..++|++||.++.++... ..+
T Consensus 104 d~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------~~~- 170 (278)
T 3sx2_A 104 DIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS------------ADP- 170 (278)
T ss_dssp CEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC------------SSH-
T ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc------------CCC-
Confidence 899999998765333345578899999999999998643 22 358999999855433211 011
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHh-CCCC-ccCC-cccCce
Q 026820 76 FCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQ-GSKD-TQEH-YWLGAV 149 (232)
Q Consensus 76 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~-~~~~-~~~~-~~~~~i 149 (232)
....|+.+|...+.+.+.++.+. |+++.+++||.+.++..... .....+..... .... .+++ ....++
T Consensus 171 ----~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 244 (278)
T 3sx2_A 171 ----GSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE--FTREWLAKMAAATDTPGAMGNAMPVEVL 244 (278)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH--HHHHHHHHHHHHCC--CTTSCSSSCSSB
T ss_pred ----CchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh--hHHHHHhhccchhhhhhhhhhhcCcCcC
Confidence 12589999999999999887653 79999999999988754321 12222222111 1111 1222 225788
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+++|+|++++.++... ..+|. ++++|.
T Consensus 245 ~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 274 (278)
T 3sx2_A 245 APEDVANAVAWLVSDQARYITGVTLPVDAG 274 (278)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCcccccccCCEEeECCC
Confidence 9999999999998643 35564 566653
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.6e-10 Score=88.57 Aligned_cols=127 Identities=11% Similarity=0.042 Sum_probs=92.1
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+.....+++|+.++.++++++.. .+..++|++||.++..+.+
T Consensus 88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------------- 153 (244)
T 2bd0_A 88 DCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR-------------- 153 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------------
T ss_pred CEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCC--------------
Confidence 7999999986541 11223467789999999999988743 3567999999974422111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
+ .+.|+.+|...|.+++.++.+ .|++++++|||.++++....... . ....++
T Consensus 154 -~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~------------~------~~~~~~ 208 (244)
T 2bd0_A 154 -H------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD------------E------MQALMM 208 (244)
T ss_dssp -T------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS------------T------TGGGSB
T ss_pred -C------CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc------------c------ccccCC
Confidence 1 158999999999998877653 58999999999999875432100 0 012578
Q ss_pred eHHhHHHHHHHhhcCCC
Q 026820 150 HVKDVAKAQVLLFETSA 166 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~ 166 (232)
+++|+|++++.++..+.
T Consensus 209 ~~~dva~~~~~l~~~~~ 225 (244)
T 2bd0_A 209 MPEDIAAPVVQAYLQPS 225 (244)
T ss_dssp CHHHHHHHHHHHHTSCT
T ss_pred CHHHHHHHHHHHHhCCc
Confidence 99999999999997653
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=1.6e-10 Score=89.51 Aligned_cols=147 Identities=20% Similarity=0.117 Sum_probs=96.7
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ....+..+..+++|+.++.++++++. +.+..++|++||.++..+.+
T Consensus 93 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 159 (260)
T 2zat_A 93 DILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFP------------- 159 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT-------------
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCC-------------
Confidence 799999997532 11122346788999999999988864 45667999999974422111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
+ ...|+.+|...|.+.+.++.+. |+++++++||.+.++....... .......+.... ....+
T Consensus 160 --~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~------~~~~~ 224 (260)
T 2zat_A 160 --N------LGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM-DKARKEYMKESL------RIRRL 224 (260)
T ss_dssp --T------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS-SHHHHHHHHHHH------TCSSC
T ss_pred --C------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc-ChHHHHHHHhcC------CCCCC
Confidence 1 1589999999999999887653 8999999999998763210000 000111111110 12358
Q ss_pred eeHHhHHHHHHHhhcCCC--CCc-eEEEec
Q 026820 149 VHVKDVAKAQVLLFETSA--ASG-RYLCTN 175 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 175 (232)
.+++|+|+++..++.... .+| .++++|
T Consensus 225 ~~~~dva~~v~~l~s~~~~~~tG~~~~vdg 254 (260)
T 2zat_A 225 GNPEDCAGIVSFLCSEDASYITGETVVVGG 254 (260)
T ss_dssp BCGGGGHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred CCHHHHHHHHHHHcCcccCCccCCEEEECC
Confidence 899999999999986543 356 467764
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.22 E-value=7.9e-11 Score=91.64 Aligned_cols=149 Identities=15% Similarity=0.103 Sum_probs=99.3
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++ ++.+..++|++||..+..+.+.
T Consensus 96 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------- 162 (266)
T 3uxy_A 96 DIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPG------------- 162 (266)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCC-------------
Confidence 89999999876411 22234567789999999999997 4445579999999744322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCC----CChhHHHHHHHHhCCCCccCCcc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPY----VNASGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 145 (232)
...|+.+|...|.+.+.++.+. |+++.+++||.+.++..... ..........+.... ..
T Consensus 163 --------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~------p~ 228 (266)
T 3uxy_A 163 --------HALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV------PL 228 (266)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTS------TT
T ss_pred --------ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcC------CC
Confidence 1589999999999999888664 89999999999976521100 000011112222221 12
Q ss_pred cCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 146 LGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
..+.+++|+|++++.++... ..+|. ++++|.
T Consensus 229 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 262 (266)
T 3uxy_A 229 GRIAEPEDIADVVLFLASDAARYLCGSLVEVNGG 262 (266)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence 35789999999999998654 34564 566643
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.6e-10 Score=89.37 Aligned_cols=148 Identities=14% Similarity=0.062 Sum_probs=97.1
Q ss_pred CeEEEeecCCCCCCC-C---CchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDP-K---DPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~-~---~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||....... . +..+..+++|+.++.++++++.. .+..++|++||.++.++.+.
T Consensus 79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------- 145 (256)
T 2d1y_A 79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE------------- 145 (256)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC-------------
Confidence 799999998654111 1 22367889999999999988753 35679999999855332211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHH-hCCCCc-c--CCcc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLL-QGSKDT-Q--EHYW 145 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~-~~~~~~-~--~~~~ 145 (232)
...|+.+|...|.+.+.++.+ .++++++++||.+.++. ....+.... ...... + ....
T Consensus 146 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 210 (256)
T 2d1y_A 146 --------NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA-------VLEAIALSPDPERTRRDWEDLHAL 210 (256)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-------HHHHHC--------CHHHHTTSTT
T ss_pred --------ChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch-------hhhccccccCCHHHHHHHHhcCCC
Confidence 158999999999999988765 38999999999986532 111100000 000000 0 0122
Q ss_pred cCceeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 146 LGAVHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
..+++++|+|++++.++... ..+| .+++++.
T Consensus 211 ~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG 244 (256)
T 2d1y_A 211 RRLGKPEEVAEAVLFLASEKASFITGAILPVDGG 244 (256)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence 46889999999999998654 3456 4667653
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.4e-10 Score=91.42 Aligned_cols=146 Identities=21% Similarity=0.127 Sum_probs=100.5
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEeccccee-ccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSI-VPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~-~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..+++|+.++.++++++. +.+..++|++||.... ++.+.
T Consensus 121 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~------------ 188 (293)
T 3rih_A 121 DVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPG------------ 188 (293)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTT------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCC------------
Confidence 79999999865411 122345778999999999999873 4566799999997442 22111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.++++.... ........+....+. .-+
T Consensus 189 ---------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~p~------~r~ 250 (293)
T 3rih_A 189 ---------WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVD---MGEEYISGMARSIPM------GML 250 (293)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH---TCHHHHHHHHTTSTT------SSC
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhh---ccHHHHHHHHhcCCC------CCC
Confidence 158999999999999988866 48999999999998764211 112233333333221 235
Q ss_pred eeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
...+|++++++.++... ..+|. ++++|.
T Consensus 251 ~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG 281 (293)
T 3rih_A 251 GSPVDIGHLAAFLATDEAGYITGQAIVVDGG 281 (293)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 67999999999998643 34564 567653
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=4.1e-10 Score=87.58 Aligned_cols=145 Identities=17% Similarity=0.104 Sum_probs=102.3
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH-----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK-----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~-----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+.....+++|+.++.++++++. +.+..++|++||.++.++.+.
T Consensus 106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 173 (267)
T 4iiu_A 106 YGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRG------------ 173 (267)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTT------------
T ss_pred cEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCC------------
Confidence 78999999875411 223446788999999999999873 445569999999866444322
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+. |+++.+++||.+.++..... ...........+ ...+
T Consensus 174 ---------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~p------~~~~ 234 (267)
T 4iiu_A 174 ---------QVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----ESALKEAMSMIP------MKRM 234 (267)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----HHHHHHHHHTCT------TCSC
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----HHHHHHHHhcCC------CCCC
Confidence 1589999999999888877654 89999999999987654321 333344333332 2246
Q ss_pred eeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
..++|+|+++..++... ..+|. ++++|.
T Consensus 235 ~~~edva~~~~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 235 GQAEEVAGLASYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence 78999999999998653 34564 566654
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.5e-10 Score=89.83 Aligned_cols=149 Identities=18% Similarity=0.064 Sum_probs=97.9
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..+++|+.++.++++++.. .+ ..++|++||..+..+.+
T Consensus 88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------- 154 (263)
T 3ak4_A 88 DLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAP------------- 154 (263)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT-------------
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCC-------------
Confidence 79999999865311 1123467889999999999988754 24 57999999974422111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCCh---h-----HHHHHHHHhCCCCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNA---S-----GAVLQRLLQGSKDT 140 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~---~-----~~~~~~~~~~~~~~ 140 (232)
+ ...|+.+|...|.+.+.++.+. |++++++|||.++++........ . ......+....
T Consensus 155 --~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 223 (263)
T 3ak4_A 155 --L------LAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLT--- 223 (263)
T ss_dssp --T------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTC---
T ss_pred --C------chhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcC---
Confidence 1 1589999999999999887653 89999999999987531100000 0 11111121211
Q ss_pred cCCcccCceeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
....+++++|+|++++.++... ..+| .++++|.
T Consensus 224 ---p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG 259 (263)
T 3ak4_A 224 ---PLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG 259 (263)
T ss_dssp ---TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred ---CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcC
Confidence 1235889999999999998654 3456 4667653
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=1e-10 Score=90.92 Aligned_cols=148 Identities=15% Similarity=0.058 Sum_probs=100.8
Q ss_pred CeEEEeecCCCC--------C-CCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTL--------D-DPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~--------~-~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|+|||+||.... . ...+..+..+++|+.++.++++++... .-.++|++||.+...+.+.
T Consensus 89 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 158 (265)
T 1qsg_A 89 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN---------- 158 (265)
T ss_dssp EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT----------
T ss_pred CEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCC----------
Confidence 789999997642 0 122344678899999999999999765 1248999999744322111
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
...|+.+|...|.+.+.++.+. |+++++++||.+.++..... .........+..+.+ ..
T Consensus 159 -----------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~p------~~ 220 (265)
T 1qsg_A 159 -----------YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVTP------IR 220 (265)
T ss_dssp -----------TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHST------TS
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc-cccHHHHHHHHhcCC------CC
Confidence 1489999999999999887664 89999999999988753221 112222333322221 12
Q ss_pred CceeHHhHHHHHHHhhcCCC--CCc-eEEEecC
Q 026820 147 GAVHVKDVAKAQVLLFETSA--ASG-RYLCTNG 176 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 176 (232)
.+.+++|+|++++.++.... .+| .+++++.
T Consensus 221 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG 253 (265)
T 1qsg_A 221 RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 253 (265)
T ss_dssp SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCCCHHHHHHHHHHHhCchhcCccCCEEEECCC
Confidence 46789999999999986532 356 4666654
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=1.8e-10 Score=89.30 Aligned_cols=149 Identities=13% Similarity=0.081 Sum_probs=98.3
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..+++|+.++.++++++. +.+..++|++||.++..+.+
T Consensus 89 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------- 154 (260)
T 2ae2_A 89 NILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVP-------------- 154 (260)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCT--------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC--------------
Confidence 7999999986431 1122345678999999999999884 44667999999974422111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCC--CCChhHHHHHHHHhCCCCccCCcccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQP--YVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
. ...|+.+|...|.+.+.++.+. ++++++++||.+.++.... ........+..+.... ....
T Consensus 155 -~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 221 (260)
T 2ae2_A 155 -Y------EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC------ALRR 221 (260)
T ss_dssp -T------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS------TTCS
T ss_pred -C------cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC------CCCC
Confidence 1 1589999999999999988764 8999999999997642110 0000011111222221 1235
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+++++|+|++++.++... ..+|. +.++|.
T Consensus 222 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG 253 (260)
T 2ae2_A 222 MGEPKELAAMVAFLCFPAASYVTGQIIYVDGG 253 (260)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 889999999999988653 24564 566654
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.21 E-value=1.9e-10 Score=88.37 Aligned_cols=146 Identities=14% Similarity=0.108 Sum_probs=97.3
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..+++|+.++.++++++. +.+..++|++||.++.++.+.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 150 (246)
T 2uvd_A 84 DILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPG------------- 150 (246)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCC-------------
Confidence 7999999986531 1122346788999999777776653 446679999999855443221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++++++||.+.++........ ....+....+ ...++
T Consensus 151 --------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~p------~~~~~ 213 (246)
T 2uvd_A 151 --------QANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDEN---IKAEMLKLIP------AAQFG 213 (246)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTT---HHHHHHHTCT------TCSCB
T ss_pred --------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHH---HHHHHHhcCC------CCCCc
Confidence 158999999999998887754 489999999999987643221111 1122222211 12478
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+.+|+|++++.++... ..+|. +.++|.
T Consensus 214 ~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 243 (246)
T 2uvd_A 214 EAQDIANAVTFFASDQSKYITGQTLNVDGG 243 (246)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHcCchhcCCCCCEEEECcC
Confidence 9999999999998653 24564 566543
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=3e-10 Score=88.66 Aligned_cols=149 Identities=14% Similarity=0.123 Sum_probs=95.5
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++. +.+..++|++||.++..+.+
T Consensus 101 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-------------- 166 (273)
T 1ae1_A 101 NILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP-------------- 166 (273)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT--------------
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCC--------------
Confidence 79999999865411 122345677899999999999874 34557999999974422111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCCh---hHHHHHHHHhCCCCccCCccc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNA---SGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 146 (232)
. ...|+.+|...|.+.+.++.+. |+++++++||.+.++........ .......+....+ ..
T Consensus 167 -~------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p------~~ 233 (273)
T 1ae1_A 167 -S------VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP------MG 233 (273)
T ss_dssp -T------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST------TC
T ss_pred -C------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC------CC
Confidence 1 1589999999999999887654 89999999999998753221100 1112222222211 12
Q ss_pred CceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 147 GAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
.+.+.+|+|++++.++... ..+|. +.++|.
T Consensus 234 r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 266 (273)
T 1ae1_A 234 RAGKPQEVSALIAFLCFPAASYITGQIIWADGG 266 (273)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCccccCcCCCEEEECCC
Confidence 4788999999999988643 34564 566654
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.21 E-value=3.5e-10 Score=87.38 Aligned_cols=148 Identities=15% Similarity=0.001 Sum_probs=96.5
Q ss_pred CeEEEeecCCCC-C----CCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-D----DPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||.... . ...+..+..+++|+.++.++++++ ++.+ .++|++||..+..+.+.
T Consensus 80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~------------ 146 (254)
T 3kzv_A 80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSS------------ 146 (254)
T ss_dssp CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCC------------
T ss_pred cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCC------------
Confidence 799999998543 1 112233568899999999999988 4445 69999999744322111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc-CCcEEEEcCCCeeCCCCCCCCC------hhHHHHHHHHhCCCCccCCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN-GTDVVAIHPATSLGPFPQPYVN------ASGAVLQRLLQGSKDTQEHY 144 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 144 (232)
...|+.+|...+.+.+.++.+. ++++.+++||.+..+....... ........+.... .
T Consensus 147 ---------~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 211 (254)
T 3kzv_A 147 ---------WGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLK------E 211 (254)
T ss_dssp ---------SHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHH------T
T ss_pred ---------cchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHH------h
Confidence 1589999999999999988775 8999999999998765332110 0112222221111 1
Q ss_pred ccCceeHHhHHHHHHHhhcCCC---CCce-EEEecC
Q 026820 145 WLGAVHVKDVAKAQVLLFETSA---ASGR-YLCTNG 176 (232)
Q Consensus 145 ~~~~i~v~D~a~~~~~~~~~~~---~~~~-~~~~~~ 176 (232)
...+.+.+|+|++++.++.... .+|. +.+++.
T Consensus 212 ~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~ 247 (254)
T 3kzv_A 212 NNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDP 247 (254)
T ss_dssp TC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCG
T ss_pred cCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCc
Confidence 2247889999999999986553 5665 455543
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.20 E-value=2e-10 Score=88.20 Aligned_cols=146 Identities=12% Similarity=0.057 Sum_probs=100.4
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+.....+++|+.++.++++++.. .+..++|++||.....+.+.
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 150 (247)
T 3lyl_A 84 DILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPG------------- 150 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT-------------
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC-------------
Confidence 79999999875411 2233467889999999999988653 34458999999855433221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+.+.++.+ .|+++.+++||.+..+..... .......+..+. ....+.
T Consensus 151 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~------~~~~~~ 213 (247)
T 3lyl_A 151 --------QTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL---TDEQKSFIATKI------PSGQIG 213 (247)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS---CHHHHHHHHTTS------TTCCCB
T ss_pred --------cHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc---cHHHHHHHhhcC------CCCCCc
Confidence 158999999999999888765 489999999999987654321 122222222221 133678
Q ss_pred eHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
+++|+|++++.++... ..+| .++++|.
T Consensus 214 ~~~dva~~i~~l~s~~~~~~tG~~i~vdgG 243 (247)
T 3lyl_A 214 EPKDIAAAVAFLASEEAKYITGQTLHVNGG 243 (247)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCCCcCCccCCEEEECCC
Confidence 9999999999998653 3456 4566653
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.7e-10 Score=89.37 Aligned_cols=141 Identities=17% Similarity=0.147 Sum_probs=95.9
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++ ++.+..++|++||.++.++.+
T Consensus 83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------- 148 (260)
T 1nff_A 83 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV-------------- 148 (260)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCC--------------
Confidence 79999999865411 12234578899999997666554 445667999999985432211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
+ ...|+.+|...|.+.+.++.+ .|++++++|||.++++... ... .. . .......+.
T Consensus 149 -~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~----------~~-~-~~~~~~~~~ 207 (260)
T 1nff_A 149 -A------CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--WVP----------ED-I-FQTALGRAA 207 (260)
T ss_dssp -T------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--TSC----------TT-C-SCCSSSSCB
T ss_pred -C------chhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--cch----------hh-H-HhCccCCCC
Confidence 1 148999999999999988765 5899999999999987432 000 00 0 000123578
Q ss_pred eHHhHHHHHHHhhcCCC--CCc-eEEEecC
Q 026820 150 HVKDVAKAQVLLFETSA--ASG-RYLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 176 (232)
+++|+|++++.++.... .+| .++++|.
T Consensus 208 ~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG 237 (260)
T 1nff_A 208 EPVEVSNLVVYLASDESSYSTGAEFVVDGG 237 (260)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 99999999999986532 346 4677654
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.19 E-value=9.7e-11 Score=90.23 Aligned_cols=146 Identities=12% Similarity=0.047 Sum_probs=95.8
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHH----HHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEA----AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+.....+++|+.++.++.++ +++.+..++|++||.++..+.+
T Consensus 83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------- 148 (249)
T 1o5i_A 83 DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE-------------- 148 (249)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCC--------------
Confidence 79999999765311 1223456778999887766554 4455667999999974422111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHH-HHHhCCCCccCCcccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQ-RLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 148 (232)
+ ...|+.+|...+.+.+.++.+ .|++++++|||.+.++.... ....... .+....+ ...+
T Consensus 149 -~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~p------~~~~ 212 (249)
T 1o5i_A 149 -N------LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE---LLSEEKKKQVESQIP------MRRM 212 (249)
T ss_dssp -T------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH---HSCHHHHHHHHTTST------TSSC
T ss_pred -C------CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc---cchhhHHHHHHhcCC------CCCC
Confidence 1 158999999999999888765 48999999999998764211 0011111 2222211 2357
Q ss_pred eeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 149 VHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
++++|+|++++.++... ..+| .++++|.
T Consensus 213 ~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG 243 (249)
T 1o5i_A 213 AKPEEIASVVAFLCSEKASYLTGQTIVVDGG 243 (249)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 89999999999988653 3446 4566654
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.6e-10 Score=87.30 Aligned_cols=123 Identities=12% Similarity=0.062 Sum_probs=82.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+||.. |+. ++++++++++.+++++|++||. .+|+.... ...+.. . ...
T Consensus 75 d~vv~~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~-~~~~~~~~----~~~~~~--~----~~~ 127 (221)
T 3r6d_A 75 EVVFVGAMES---------------GSD-MASIVKALSRXNIRRVIGVSMA-GLSGEFPV----ALEKWT--F----DNL 127 (221)
T ss_dssp SEEEESCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEET-TTTSCSCH----HHHHHH--H----HTS
T ss_pred CEEEEcCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeec-eecCCCCc----cccccc--c----ccc
Confidence 7899999862 455 9999999999999999999997 43432110 010000 0 001
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVL 160 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 160 (232)
.+.|+.+|..+|.+++ +.+++++++||+.++++......... ... ......+++.+|+|++++.
T Consensus 128 ~~~y~~~K~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~~~~--------~~~----~~~~~~~~~~~dvA~~~~~ 191 (221)
T 3r6d_A 128 PISYVQGERQARNVLR----ESNLNYTILRLTWLYNDPEXTDYELI--------PEG----AQFNDAQVSREAVVKAIFD 191 (221)
T ss_dssp CHHHHHHHHHHHHHHH----HSCSEEEEEEECEEECCTTCCCCEEE--------CTT----SCCCCCEEEHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH----hCCCCEEEEechhhcCCCCCcceeec--------cCC----ccCCCceeeHHHHHHHHHH
Confidence 1279999999999865 45999999999999987332211100 000 0012248999999999999
Q ss_pred hh--cCCC
Q 026820 161 LF--ETSA 166 (232)
Q Consensus 161 ~~--~~~~ 166 (232)
++ ..+.
T Consensus 192 l~~~~~~~ 199 (221)
T 3r6d_A 192 ILHAADET 199 (221)
T ss_dssp HHTCSCCG
T ss_pred HHHhcChh
Confidence 99 6654
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.8e-10 Score=89.00 Aligned_cols=147 Identities=16% Similarity=0.147 Sum_probs=96.3
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++ ++.+..++|++||.++..+.+.
T Consensus 81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 147 (255)
T 2q2v_A 81 DILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTG------------- 147 (255)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCC-------------
Confidence 79999999865311 12234678899999777766654 5566679999999854322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChh---HHH---H----HHHHhCCCC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNAS---GAV---L----QRLLQGSKD 139 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~---~~~---~----~~~~~~~~~ 139 (232)
...|+.+|...+.+.+.++.+ .|++++++|||.+.++.... .. ... . ..+....
T Consensus 148 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-- 214 (255)
T 2q2v_A 148 --------KAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQK---QIDDRAANGGDPLQAQHDLLAEK-- 214 (255)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHH---HHHHHHHHTCCHHHHHHHHHTTT--
T ss_pred --------chhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhh---hcccccccccchHHHHHHHHhcc--
Confidence 158999999999999998876 37999999999998753110 00 000 0 1110111
Q ss_pred ccCCcccCceeHHhHHHHHHHhhcCCC--CCc-eEEEecC
Q 026820 140 TQEHYWLGAVHVKDVAKAQVLLFETSA--ASG-RYLCTNG 176 (232)
Q Consensus 140 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~~ 176 (232)
.....+++++|+|++++.++.... .+| .++++|.
T Consensus 215 ---~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 251 (255)
T 2q2v_A 215 ---QPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG 251 (255)
T ss_dssp ---CTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ---CCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCC
Confidence 112358899999999999886532 346 4666654
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=9.2e-11 Score=91.80 Aligned_cols=146 Identities=16% Similarity=0.103 Sum_probs=98.1
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc------CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF------GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||...... ..+..+..+++|+.++.++++++... +..++|++||.++.++.+.
T Consensus 101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~----------- 169 (277)
T 2rhc_B 101 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH----------- 169 (277)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTT-----------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCC-----------
Confidence 79999999865311 11233678899999999999987553 5579999999855332111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChh-----------HHHHHHHHhC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNAS-----------GAVLQRLLQG 136 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~-----------~~~~~~~~~~ 136 (232)
...|+.+|...|.+.+.++.+ .|+++++++||.+.++.... .. ......+...
T Consensus 170 ----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 236 (277)
T 2rhc_B 170 ----------AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS---VREHYSDIWEVSTEEAFDRITAR 236 (277)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH---HHHHHHHHHTCCHHHHHHHHHHH
T ss_pred ----------CccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh---hhhhcccccccchHHHHHHHHhc
Confidence 158999999999999988765 37999999999998652110 00 0111111111
Q ss_pred CCCccCCcccCceeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 137 SKDTQEHYWLGAVHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 137 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
. ....+++++|+|++++.++... ..+| .++++|.
T Consensus 237 ~------p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG 273 (277)
T 2rhc_B 237 V------PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 273 (277)
T ss_dssp S------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred C------CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence 1 1235889999999999998654 3456 4666654
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.19 E-value=4.7e-10 Score=87.46 Aligned_cols=146 Identities=13% Similarity=0.019 Sum_probs=99.3
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||...... ..+..+..+++|+.++.++++++... ...++|++||..+..+.. ..
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~--------------~~ 176 (271)
T 3v2g_A 111 DILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPW--------------PG 176 (271)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCS--------------TT
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCC--------------CC
Confidence 79999999865411 22234677899999999999998764 345899999863322110 01
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
...|+.+|...+.+.+.++.+. |+++.+++||.+.++.......... ......+ ...+...
T Consensus 177 ------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~----~~~~~~~------~~r~~~p 240 (271)
T 3v2g_A 177 ------ISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAE----AQRERIA------TGSYGEP 240 (271)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHH----HHHHTCT------TSSCBCH
T ss_pred ------chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHH----HHHhcCC------CCCCCCH
Confidence 1589999999999999887654 8999999999998875433211111 1222211 1246789
Q ss_pred HhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 152 KDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 152 ~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
+|+|++++.++.. ...+|. +.++|.
T Consensus 241 edvA~~v~fL~s~~~~~itG~~i~vdGG 268 (271)
T 3v2g_A 241 QDIAGLVAWLAGPQGKFVTGASLTIDGG 268 (271)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhCcccCCccCCEEEeCcC
Confidence 9999999998854 335564 566653
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.19 E-value=1.7e-10 Score=89.12 Aligned_cols=146 Identities=13% Similarity=0.107 Sum_probs=99.0
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++ .+.+..++|++||.++..+.+.
T Consensus 93 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 159 (256)
T 3ezl_A 93 DVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFG------------- 159 (256)
T ss_dssp EEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSC-------------
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCC-------------
Confidence 78999999875421 12234578899999988887776 3445578999999855433221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+.++.... ........+....+ ...+.
T Consensus 160 --------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~~------~~~~~ 222 (256)
T 3ezl_A 160 --------QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA---IRPDVLEKIVATIP------VRRLG 222 (256)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---SCHHHHHHHHHHST------TSSCB
T ss_pred --------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc---cCHHHHHHHHhcCC------CCCCc
Confidence 158999999999999888765 48999999999997643221 11223333333221 23477
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+.+|+|++++.++... ..+|. ++++|.
T Consensus 223 ~~~dva~~~~~l~s~~~~~~tG~~i~vdgG 252 (256)
T 3ezl_A 223 SPDEIGSIVAWLASEESGFSTGADFSLNGG 252 (256)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCCcccCCcCcEEEECCC
Confidence 8999999999988543 34564 566653
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=2.3e-10 Score=88.37 Aligned_cols=149 Identities=11% Similarity=0.059 Sum_probs=98.5
Q ss_pred CeEEEeecCC-CCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPN-TLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~-~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.. ... ...+..+..+++|+.++.++++++. +.+..++|++||.....+.+.
T Consensus 74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 141 (254)
T 1zmt_A 74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE------------ 141 (254)
T ss_dssp CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT------------
T ss_pred CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCC------------
Confidence 8999999986 321 1122346788999999999998874 345569999999744322111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCCh-h----HHHHHHHHhCCCCccCC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNA-S----GAVLQRLLQGSKDTQEH 143 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~-~----~~~~~~~~~~~~~~~~~ 143 (232)
...|+.+|...+.+.+.++.+ .|+++++++||.++|+........ . ......+....+
T Consensus 142 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p----- 207 (254)
T 1zmt_A 142 ---------LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA----- 207 (254)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS-----
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCC-----
Confidence 158999999999999988765 389999999999988764321111 0 111111111111
Q ss_pred cccCceeHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 144 YWLGAVHVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
...+.+.+|+|++++.++.... .+|. +.++|.
T Consensus 208 -~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG 242 (254)
T 1zmt_A 208 -LQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG 242 (254)
T ss_dssp -SSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred -CCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence 1236789999999999986543 3564 566654
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.4e-10 Score=88.93 Aligned_cols=138 Identities=16% Similarity=0.127 Sum_probs=94.3
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||....... .+..+..+++|+.++.++++++. +.+..++|++||.++..+.+.
T Consensus 89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~------------- 155 (266)
T 3p19_A 89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPD------------- 155 (266)
T ss_dssp EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT-------------
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCC-------------
Confidence 789999998754211 12234678999999999877764 446679999999855322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCCh-hHHHHHHHHhCCCCccCCcccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNA-SGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+.++........ .......... ....+
T Consensus 156 --------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--------~~~r~ 219 (266)
T 3p19_A 156 --------HAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRV--------DMGGV 219 (266)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHH--------HTTCC
T ss_pred --------CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcc--------cccCC
Confidence 158999999999999988766 489999999999987653221111 1111111000 11247
Q ss_pred eeHHhHHHHHHHhhcCCCC
Q 026820 149 VHVKDVAKAQVLLFETSAA 167 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~ 167 (232)
++++|+|++++.++..+..
T Consensus 220 ~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 220 LAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp BCHHHHHHHHHHHHHSCTT
T ss_pred CCHHHHHHHHHHHHcCCCC
Confidence 8899999999999987754
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.9e-10 Score=88.12 Aligned_cols=149 Identities=19% Similarity=0.149 Sum_probs=95.2
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..+++|+.++.++++++. +.+..++|++||..+..+.+.
T Consensus 85 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 151 (260)
T 1x1t_A 85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN------------- 151 (260)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCC-------------
Confidence 7999999986531 1122346788999999999988874 345579999999855332111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChh--------HHHHHHH-HhCCCCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNAS--------GAVLQRL-LQGSKDT 140 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~--------~~~~~~~-~~~~~~~ 140 (232)
...|+.+|...|.+.+.++.+. |+++++++||.+.++......... ......+ ...
T Consensus 152 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 219 (260)
T 1x1t_A 152 --------KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEK---- 219 (260)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHH----
T ss_pred --------CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhcc----
Confidence 1589999999999999887653 899999999999876432210000 0000010 000
Q ss_pred cCCcccCceeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
. ....+.+++|+|++++.++... ..+| .++++|.
T Consensus 220 ~--p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG 256 (260)
T 1x1t_A 220 Q--PSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp C--TTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred C--CCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence 0 1235789999999999998653 3456 4566653
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=1.8e-10 Score=88.70 Aligned_cols=148 Identities=16% Similarity=0.083 Sum_probs=92.6
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHH----HHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEA----AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.+++++ +++.+..++|++||..+..+.+.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 150 (249)
T 2ew8_A 84 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA------------- 150 (249)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS-------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCC-------------
Confidence 79999999865311 1223456789999998888877 44556679999999744322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+.+.++.+ .|+++++++||.+.++...... ... ........ . .....+.
T Consensus 151 --------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~-~~~~~~~~---~-~~~~~~~ 215 (249)
T 2ew8_A 151 --------YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASA--LSA-MFDVLPNM---L-QAIPRLQ 215 (249)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CT---T-SSSCSCC
T ss_pred --------chhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhcc--ccc-hhhHHHHh---h-CccCCCC
Confidence 158999999999999988765 4899999999999876432000 000 00111110 0 1112478
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+++|+|++++.++... ..+|. +.++|.
T Consensus 216 ~p~dva~~~~~l~s~~~~~~tG~~~~vdGG 245 (249)
T 2ew8_A 216 VPLDLTGAAAFLASDDASFITGQTLAVDGG 245 (249)
T ss_dssp CTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred CHHHHHHHHHHHcCcccCCCCCcEEEECCC
Confidence 9999999999998643 34564 566553
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.18 E-value=3.2e-10 Score=87.27 Aligned_cols=146 Identities=12% Similarity=0.082 Sum_probs=101.0
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..+..+..+++|+.++.++++++.. .+..++|++||.++.++.+.
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------- 151 (248)
T 3op4_A 85 DILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAG------------- 151 (248)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCC-------------
Confidence 79999999865411 2233467889999999999998753 45568999999865443221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+..+..... ............+ ...+.
T Consensus 152 --------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~p------~~r~~ 214 (248)
T 3op4_A 152 --------QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL---NDEQRTATLAQVP------AGRLG 214 (248)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS---CHHHHHHHHHTCT------TCSCB
T ss_pred --------ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc---CHHHHHHHHhcCC------CCCCc
Confidence 158999999999999888765 489999999999977643321 1222222222221 23578
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+++|+|++++.++... ..+|. ++++|.
T Consensus 215 ~p~dva~~v~~L~s~~~~~itG~~i~vdgG 244 (248)
T 3op4_A 215 DPREIASAVAFLASPEAAYITGETLHVNGG 244 (248)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence 8999999999988643 34564 566653
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.18 E-value=3.4e-10 Score=88.87 Aligned_cols=161 Identities=15% Similarity=0.133 Sum_probs=104.0
Q ss_pred CeEEEeecCCCCC--CCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTLD--DPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~~--~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~ 76 (232)
|+|||+||..... ...+..+..+++|+.++.++++++... +-.++|++||.+...+.... +..|..+.
T Consensus 101 d~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~----~~~~~~~~---- 172 (287)
T 3pxx_A 101 DVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQP----PGAGGPQG---- 172 (287)
T ss_dssp CEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCC----C-----CH----
T ss_pred CEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccc----ccccccCC----
Confidence 7999999987642 223445788999999999999999765 33589999998654443221 12222211
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCC--C---------CccC
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGS--K---------DTQE 142 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~--~---------~~~~ 142 (232)
+....|+.+|...+.+.+.++.+. |+++.+++||.+..+..... .. ...+.... + ....
T Consensus 173 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~ 245 (287)
T 3pxx_A 173 --PGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSA--PM---YRQFRPDLEAPSRADALLAFPAMQ 245 (287)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSH--HH---HHHHCTTSSSCCHHHHHHHGGGGC
T ss_pred --CccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc--ch---hhhhccccccchhHHHHhhhhhhc
Confidence 122589999999999999988764 89999999999987653310 00 00000000 0 0001
Q ss_pred CcccCceeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 143 HYWLGAVHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
.....+.+++|+|++++.++... ..+| .++++|.
T Consensus 246 ~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG 282 (287)
T 3pxx_A 246 AMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG 282 (287)
T ss_dssp SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ccCCCCCCHHHHHhhHheecchhhcCCCCceEeECch
Confidence 11256889999999999998543 3566 4667653
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.18 E-value=3.8e-10 Score=87.70 Aligned_cols=146 Identities=15% Similarity=0.111 Sum_probs=94.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc-----CCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF-----GVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..+++|+.++.++++++... +..++|++||.....+.+.
T Consensus 103 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------------ 170 (266)
T 3o38_A 103 DVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHS------------ 170 (266)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTT------------
T ss_pred cEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCC------------
Confidence 79999999865411 12234567899999999999987653 4458999999744322111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...|.+.+.++.+ .|+.+.+++||.+..+..... ........+.... ....+
T Consensus 171 ---------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~------~~~r~ 233 (266)
T 3o38_A 171 ---------QSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT--SSSELLDRLASDE------AFGRA 233 (266)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------CC------TTSSC
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc--CcHHHHHHHHhcC------CcCCC
Confidence 158999999999999988766 589999999999976542211 0111111111111 23357
Q ss_pred eeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 149 VHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
.+++|+|++++.++... ..+|. ++++|
T Consensus 234 ~~~~dva~~i~~l~s~~~~~~tG~~i~vdg 263 (266)
T 3o38_A 234 AEPWEVAATIAFLASDYSSYMTGEVVSVSS 263 (266)
T ss_dssp CCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred CCHHHHHHHHHHHcCccccCccCCEEEEcC
Confidence 89999999999998653 34564 56654
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.18 E-value=2.6e-10 Score=87.25 Aligned_cols=150 Identities=15% Similarity=0.158 Sum_probs=98.2
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++. +.+..++|++||.++..+. . .
T Consensus 72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~------------~ 138 (239)
T 2ekp_A 72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG-G------------P 138 (239)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-T------------T
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC-C------------C
Confidence 79999999865311 122346778999999999998874 3466799999997442211 0 0
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
.+ ...|+.+|...|.+.+.++.+. |++++++|||.+.++..... .........+....+ ...+.
T Consensus 139 ~~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~p------~~~~~ 205 (239)
T 2ekp_A 139 VP------IPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPL-RQNPELYEPITARIP------MGRWA 205 (239)
T ss_dssp SC------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-HTCHHHHHHHHTTCT------TSSCB
T ss_pred CC------CccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcc-ccCHHHHHHHHhcCC------CCCCc
Confidence 01 1589999999999999887654 89999999999987532100 000112222222111 12478
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
..+|+|++++.++... ..+|. +.++|.
T Consensus 206 ~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 235 (239)
T 2ekp_A 206 RPEEIARVAAVLCGDEAEYLTGQAVAVDGG 235 (239)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHcCchhcCCCCCEEEECCC
Confidence 9999999999988653 24564 566553
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.17 E-value=1.1e-10 Score=89.79 Aligned_cols=150 Identities=16% Similarity=0.092 Sum_probs=98.3
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++. +.+..++|++||.+...+.+
T Consensus 76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------- 141 (246)
T 2ag5_A 76 DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV-------------- 141 (246)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC--------------
T ss_pred CEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC--------------
Confidence 79999999865411 112345678899999999998875 34567999999974422211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC---ChhHHHHHHHHhCCCCccCCccc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV---NASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
.+ ...|+.+|...|.+.+.++.+ .|++++++|||.++++...... .........+....+ ..
T Consensus 142 ~~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 209 (246)
T 2ag5_A 142 VN------RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK------TG 209 (246)
T ss_dssp TT------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT------TS
T ss_pred CC------CccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC------CC
Confidence 01 158999999999999988765 3899999999999986321000 000111222222211 12
Q ss_pred CceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 147 GAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
.+.+.+|+|++++.++... ..+|. +.++|.
T Consensus 210 ~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG 242 (246)
T 2ag5_A 210 RFATAEEIAMLCVYLASDESAYVTGNPVIIDGG 242 (246)
T ss_dssp SCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred CCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 4789999999999998653 34564 566553
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.3e-10 Score=91.11 Aligned_cols=149 Identities=16% Similarity=0.059 Sum_probs=98.6
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH------cCCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK------FGVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~------~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||...... ..+..+..+++|+.++.++++++.. .+..++|++||.++..+.+.
T Consensus 103 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~----------- 171 (279)
T 3sju_A 103 GILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMY----------- 171 (279)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTT-----------
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCC-----------
Confidence 79999999865411 1122356778999999999998754 35569999999855322111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCC-------CCC-hhHHHHHHHHhCCCC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQP-------YVN-ASGAVLQRLLQGSKD 139 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~-------~~~-~~~~~~~~~~~~~~~ 139 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+.++.... ... ........+....
T Consensus 172 ----------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 239 (279)
T 3sju_A 172 ----------AAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI-- 239 (279)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC--
T ss_pred ----------ChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC--
Confidence 158999999999999988876 48999999999997542100 000 0111222222221
Q ss_pred ccCCcccCceeHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 140 TQEHYWLGAVHVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 140 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
....+..++|+|++++.++.... .+|. ++++|.
T Consensus 240 ----p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG 275 (279)
T 3sju_A 240 ----PLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGG 275 (279)
T ss_dssp ----TTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTT
T ss_pred ----CCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence 12357889999999999986543 4664 566654
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.17 E-value=1.5e-10 Score=89.05 Aligned_cols=146 Identities=16% Similarity=0.087 Sum_probs=95.8
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..+++|+.++.++++++.. .+..++|++||....++.+.
T Consensus 83 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 149 (247)
T 1uzm_A 83 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGN------------- 149 (247)
T ss_dssp SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----C-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCC-------------
Confidence 7999999986531 12234467889999999999988753 45679999999855443211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+.+.++.+ .|+++++++||.+.++.... ........+.... ....+.
T Consensus 150 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~------p~~~~~ 212 (247)
T 1uzm_A 150 --------QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA---LDERIQQGALQFI------PAKRVG 212 (247)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---SCHHHHHHHGGGC------TTCSCB
T ss_pred --------ChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh---cCHHHHHHHHhcC------CCCCCc
Confidence 148999999999999888765 48999999999996542110 0011111111111 112478
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+.+|+|++++.++... ..+|. +.++|.
T Consensus 213 ~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG 242 (247)
T 1uzm_A 213 TPAEVAGVVSFLASEDASYISGAVIPVDGG 242 (247)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHcCccccCCcCCEEEECCC
Confidence 9999999999998653 24564 566553
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=5.7e-10 Score=86.14 Aligned_cols=144 Identities=16% Similarity=0.112 Sum_probs=94.1
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHH----HHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEA----AKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~----~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..+++|+.++..++++ +++.+..++|++||.++..+.+.
T Consensus 81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 147 (254)
T 1hdc_A 81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL------------- 147 (254)
T ss_dssp CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC-------------
Confidence 7999999986531 11223467789999988755544 55556679999999754322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCcc-CC-cccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQ-EH-YWLG 147 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~ 147 (232)
...|+.+|...|.+.+.++.+ .|++++++|||.++++. . ..........+ .. ....
T Consensus 148 --------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~-------~----~~~~~~~~~~~~~~~p~~~ 208 (254)
T 1hdc_A 148 --------TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-------T----AETGIRQGEGNYPNTPMGR 208 (254)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-------H----HHHTCCCSTTSCTTSTTSS
T ss_pred --------chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc-------c----cccchhHHHHHHhcCCCCC
Confidence 158999999999999988765 48999999999997642 1 11100000001 11 1123
Q ss_pred ce-eHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 148 AV-HVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 148 ~i-~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+. +.+|+|++++.++... ..+|. +.++|.
T Consensus 209 ~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG 241 (254)
T 1hdc_A 209 VGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG 241 (254)
T ss_dssp CB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence 67 9999999999998654 34564 566654
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=1.4e-10 Score=90.29 Aligned_cols=152 Identities=16% Similarity=0.036 Sum_probs=97.6
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHHHHHHHHHHcC--CCEEEEecccceeccCCCCCC-------CCccC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTLNVLEAAKKFG--VRRVVLTSSISSIVPNPNWPQ-------GKVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~i~~Ss~~~~~~~~~~~~-------~~~~~ 67 (232)
|+|||+||........ ...+..+++|+.++.++++++...- ..++|++||..+.++.....+ ...++
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~ 163 (276)
T 1wma_A 84 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT 163 (276)
T ss_dssp EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCC
T ss_pred CEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccc
Confidence 7899999986542111 2346778999999999999998752 248999999855543111000 00122
Q ss_pred CCCCCC-------------cccccccchhHHHHHHHHHHHHHHHHHH-------cCCcEEEEcCCCeeCCCCCCCCChhH
Q 026820 68 ETSWTD-------------LDFCKSHKIWYSMSKTLAEKAAWEFAEK-------NGTDVVAIHPATSLGPFPQPYVNASG 127 (232)
Q Consensus 68 E~~~~~-------------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~ilR~~~i~G~~~~~~~~~~~ 127 (232)
|+++.. ...+..+.+.|+.+|...|.+++.++.+ .++++++++||.+.++....
T Consensus 164 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~------ 237 (276)
T 1wma_A 164 EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP------ 237 (276)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT------
T ss_pred hhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc------
Confidence 211000 0000001258999999999999887765 48999999999997653211
Q ss_pred HHHHHHHhCCCCccCCcccCceeHHhHHHHHHHhhcCC----CCCceEEEecC
Q 026820 128 AVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETS----AASGRYLCTNG 176 (232)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~----~~~~~~~~~~~ 176 (232)
..+.+.+|+|++++.++..+ ..+|.++..+.
T Consensus 238 ------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~~ 272 (276)
T 1wma_A 238 ------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKR 272 (276)
T ss_dssp ------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTE
T ss_pred ------------------cccCChhHhhhhHhhhhcCcccccccCceEeccCc
Confidence 13678999999999999754 23565544433
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.16 E-value=3.9e-10 Score=88.64 Aligned_cols=145 Identities=14% Similarity=0.080 Sum_probs=96.4
Q ss_pred CeEEEeecCCCC-C----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-D----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... . ...+..+..+++|+.++.++++++. +.+..++|++||.++..+.+.
T Consensus 117 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~------------ 184 (287)
T 3rku_A 117 DILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPT------------ 184 (287)
T ss_dssp CEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTT------------
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCC------------
Confidence 799999997642 1 1222346788999999999999873 445569999999855332211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+..+................... ...
T Consensus 185 ---------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---------~~p 246 (287)
T 3rku_A 185 ---------GSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD---------TTP 246 (287)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT---------SCC
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc---------cCC
Confidence 158999999999999998876 48999999999997642100000001111111111 134
Q ss_pred eeHHhHHHHHHHhhcCCCC--Cc-eEEEec
Q 026820 149 VHVKDVAKAQVLLFETSAA--SG-RYLCTN 175 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~--~~-~~~~~~ 175 (232)
+..+|+|++++.++..... .| .+++++
T Consensus 247 ~~pedvA~~v~~l~s~~~~~i~g~~i~v~~ 276 (287)
T 3rku_A 247 LMADDVADLIVYATSRKQNTVIADTLIFPT 276 (287)
T ss_dssp EEHHHHHHHHHHHHTSCTTEEEEEEEEEET
T ss_pred CCHHHHHHHHHHHhCCCCCeEecceEEeeC
Confidence 5899999999999976543 23 345554
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=2.3e-10 Score=89.13 Aligned_cols=143 Identities=18% Similarity=0.106 Sum_probs=99.6
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++. +.+..++|++||.++.++.+.
T Consensus 108 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 174 (269)
T 4dmm_A 108 DVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPG------------- 174 (269)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTT-------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCC-------------
Confidence 79999999875411 123346788999999999998874 345569999999865443222
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+.++... ... ...+....+ ...+.
T Consensus 175 --------~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~----~~~--~~~~~~~~p------~~r~~ 234 (269)
T 4dmm_A 175 --------QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS----ELA--AEKLLEVIP------LGRYG 234 (269)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC----HHH--HHHHGGGCT------TSSCB
T ss_pred --------chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc----ccc--HHHHHhcCC------CCCCC
Confidence 158999999999999888765 4899999999999876422 111 122222211 23577
Q ss_pred eHHhHHHHHHHhhcCC---CCCc-eEEEecC
Q 026820 150 HVKDVAKAQVLLFETS---AASG-RYLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~---~~~~-~~~~~~~ 176 (232)
+.+|+|++++.++..+ ..+| .++++|.
T Consensus 235 ~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG 265 (269)
T 4dmm_A 235 EAAEVAGVVRFLAADPAAAYITGQVINIDGG 265 (269)
T ss_dssp CHHHHHHHHHHHHHCGGGGGCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCCcccCCCcCCEEEECCC
Confidence 8999999999999763 2456 4667653
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.2e-10 Score=90.33 Aligned_cols=149 Identities=13% Similarity=0.008 Sum_probs=95.0
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..+++|+.++.++++++. +.+..++|++||..+..+.+
T Consensus 87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------- 152 (260)
T 2z1n_A 87 DILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQ-------------- 152 (260)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC--------------
Confidence 7999999975431 1122346788999999977776653 45667999999974422111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCC------hhH-HH-HHHHHhCCCCcc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVN------ASG-AV-LQRLLQGSKDTQ 141 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~------~~~-~~-~~~~~~~~~~~~ 141 (232)
+ ...|+.+|...+.+.+.++.+. |++++++|||.++++....... ... .. ...+....
T Consensus 153 -~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 221 (260)
T 2z1n_A 153 -D------LALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRI---- 221 (260)
T ss_dssp -T------BHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CC----
T ss_pred -C------CchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcC----
Confidence 1 1589999999999998887654 8999999999998875331000 000 00 11111111
Q ss_pred CCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 142 EHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 142 ~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
....+.+++|+|++++.++... ..+|. +.++|.
T Consensus 222 --p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG 257 (260)
T 2z1n_A 222 --PMGRVGKPEELASVVAFLASEKASFITGAVIPVDGG 257 (260)
T ss_dssp --TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred --CCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence 1124779999999999998653 34564 566553
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.16 E-value=1.6e-10 Score=89.67 Aligned_cols=147 Identities=15% Similarity=0.158 Sum_probs=96.7
Q ss_pred CeEEEeecCCCC------CCCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL------DDPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||.... ....+.....+++|+.++.++++++ ++.+..++|++||.+. +.....
T Consensus 87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~-~~~~~~---------- 155 (264)
T 3i4f_A 87 DFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGA-DSAPGW---------- 155 (264)
T ss_dssp CEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTG-GGCCCC----------
T ss_pred CEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechh-cccCCC----------
Confidence 799999994221 1112234677899999999999998 4556678999998733 211110
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
. ....|+.+|...|.+.+.++.+ .|+++.+++||.++++.... ............. ....
T Consensus 156 --~------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~------p~~r 218 (264)
T 3i4f_A 156 --I------YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEA---TIQEARQLKEHNT------PIGR 218 (264)
T ss_dssp --T------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSC---CHHHHHHC--------------C
T ss_pred --C------CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchh---ccHHHHHHHhhcC------CCCC
Confidence 0 1158999999999999988766 58999999999998875432 1122111111111 1224
Q ss_pred ceeHHhHHHHHHHhhcCCC--CCce-EEEec
Q 026820 148 AVHVKDVAKAQVLLFETSA--ASGR-YLCTN 175 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 175 (232)
+.+++|+|++++.++.... .+|. ++++|
T Consensus 219 ~~~~~dva~~v~~l~s~~~~~itG~~i~vdG 249 (264)
T 3i4f_A 219 SGTGEDIARTISFLCEDDSDMITGTIIEVTG 249 (264)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred CcCHHHHHHHHHHHcCcccCCCCCcEEEEcC
Confidence 7789999999999987543 4564 56654
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.16 E-value=5e-10 Score=86.15 Aligned_cols=147 Identities=18% Similarity=0.144 Sum_probs=95.3
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCC-CEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGV-RRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+.....+++|+.++.++.+++ ++.+. +++|++||..+..+.+.
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------ 151 (251)
T 1zk4_A 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS------------ 151 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCC------------
Confidence 79999999865411 11233578899999877766664 44465 69999999744322111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHH-----HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAE-----KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
...|+.+|...|.+.+.++. ..+++++++|||.++++..... .. .......... ....
T Consensus 152 ---------~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~--~~~~~~~~~~-----~~~~ 214 (251)
T 1zk4_A 152 ---------LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PG--AEEAMSQRTK-----TPMG 214 (251)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TT--HHHHHTSTTT-----CTTS
T ss_pred ---------CccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-Cc--hhhhHHHhhc-----CCCC
Confidence 15899999999999888765 4589999999999987642211 10 1111101110 1123
Q ss_pred CceeHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 147 GAVHVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
.+++++|+|++++.++.... ..|. +++++.
T Consensus 215 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 247 (251)
T 1zk4_A 215 HIGEPNDIAYICVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence 58899999999999986542 3464 566653
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.16 E-value=2.8e-10 Score=88.02 Aligned_cols=147 Identities=17% Similarity=0.107 Sum_probs=99.5
Q ss_pred CeEEEeecCCCCCC---CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDD---PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~---~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||...... ..+..+..+++|+.++.++++++. +.+..++|++||..+..+.+.
T Consensus 91 d~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 156 (256)
T 3gaf_A 91 TVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVR-------------- 156 (256)
T ss_dssp CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTT--------------
T ss_pred CEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCC--------------
Confidence 79999999876522 122345678999999999999874 445569999999854322111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
...|+.+|...|.+.+.++.+ .|+++.+++||.+.++..... ........+....+ ...+.+
T Consensus 157 -------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~p------~~r~~~ 221 (256)
T 3gaf_A 157 -------MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV--LTPEIERAMLKHTP------LGRLGE 221 (256)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH--CCHHHHHHHHTTCT------TSSCBC
T ss_pred -------chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc--cCHHHHHHHHhcCC------CCCCCC
Confidence 158999999999999988866 389999999999976421100 01122222222221 235788
Q ss_pred HHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 151 VKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 151 v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
++|+|++++.++... ..+| .++++|.
T Consensus 222 ~~dva~~~~~L~s~~~~~itG~~i~vdgG 250 (256)
T 3gaf_A 222 AQDIANAALFLCSPAAAWISGQVLTVSGG 250 (256)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHHcCCcccCccCCEEEECCC
Confidence 999999999998643 3456 4677653
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=3.1e-10 Score=89.41 Aligned_cols=147 Identities=14% Similarity=0.089 Sum_probs=100.0
Q ss_pred CeEEEeecCCCCCC-----CCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDD-----PKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||...... ..+..+..+++|+.++.++++++... ...++|++||..+..+...
T Consensus 127 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 192 (291)
T 3ijr_A 127 NILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNET-------------- 192 (291)
T ss_dssp CEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTT--------------
T ss_pred CEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCC--------------
Confidence 79999999864311 22344678899999999999999764 2348999999855433221
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
...|+.+|...|.+.+.++.+. |+++.+++||.+.++..... ........+.... ....+.+
T Consensus 193 -------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~------p~~r~~~ 257 (291)
T 3ijr_A 193 -------LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSS--FDEKKVSQFGSNV------PMQRPGQ 257 (291)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHH--SCHHHHHHTTTTS------TTSSCBC
T ss_pred -------ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCccccc--CCHHHHHHHHccC------CCCCCcC
Confidence 1489999999999999988764 89999999999987531100 0011111111111 2235788
Q ss_pred HHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 151 VKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 151 v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
++|+|++++.++... ..+|. ++++|.
T Consensus 258 p~dvA~~v~~L~s~~~~~itG~~i~vdGG 286 (291)
T 3ijr_A 258 PYELAPAYVYLASSDSSYVTGQMIHVNGG 286 (291)
T ss_dssp GGGTHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred HHHHHHHHHHHhCCccCCCcCCEEEECCC
Confidence 999999999998653 34564 566653
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.5e-10 Score=91.72 Aligned_cols=148 Identities=11% Similarity=0.023 Sum_probs=97.1
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... .........+++|+.++.++++++.. .+..++|++||.+ .++.+.
T Consensus 102 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~------------- 167 (303)
T 1yxm_A 102 NFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPL------------- 167 (303)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTT-------------
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCc-------------
Confidence 7999999965431 11123456789999999999999765 2346899999973 222111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCCh-hHHHHHHHHhCCCCccCCcccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNA-SGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+. |++++++|||.++|+........ .......+... . ....+
T Consensus 168 --------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~----~--p~~~~ 233 (303)
T 1yxm_A 168 --------AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK----I--PAKRI 233 (303)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG----S--TTSSC
T ss_pred --------chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc----C--cccCC
Confidence 1489999999999999887764 89999999999999842111110 01111111111 0 11247
Q ss_pred eeHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
++++|+|++++.++.... .+|. +++++.
T Consensus 234 ~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG 264 (303)
T 1yxm_A 234 GVPEEVSSVVCFLLSPAASFITGQSVDVDGG 264 (303)
T ss_dssp BCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHhCcccccCCCcEEEECCC
Confidence 899999999999986532 4564 567654
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.15 E-value=5.1e-10 Score=87.67 Aligned_cols=150 Identities=16% Similarity=0.056 Sum_probs=99.6
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ....+..+..+++|+.++.++++++.. .+..++|++||..+. ....
T Consensus 87 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-~~~~------------ 153 (280)
T 3tox_A 87 DTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGH-TAGF------------ 153 (280)
T ss_dssp CEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTT-TBCC------------
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhC-cCCC------------
Confidence 799999997532 112233467889999999999988753 344589999997432 1100
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCC-ChhHHHHHHHHhCCCCccCCcccC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYV-NASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
+ ....|+.+|...+.+.+.++.+. |+++.+++||.+.++...... .........+.... ....
T Consensus 154 --~-----~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------p~~r 220 (280)
T 3tox_A 154 --A-----GVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLH------ALKR 220 (280)
T ss_dssp --T-----TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTS------TTSS
T ss_pred --C-----CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccC------ccCC
Confidence 0 11589999999999999988764 899999999999887532211 01111222222221 1235
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 148 AVHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
+.+++|+|++++.++... ..+| .++++|.
T Consensus 221 ~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG 252 (280)
T 3tox_A 221 IARPEEIAEAALYLASDGASFVTGAALLADGG 252 (280)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCccccCCcCcEEEECCC
Confidence 788999999999998653 3456 4677654
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.3e-10 Score=91.00 Aligned_cols=149 Identities=15% Similarity=0.070 Sum_probs=99.8
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..+++|+.++.++++++.. .+..++|++||..+..+...
T Consensus 107 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 173 (277)
T 4fc7_A 107 DILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQAL------------- 173 (277)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTT-------------
T ss_pred CEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC-------------
Confidence 7999999975431 12223467889999999999998742 33458999999855443222
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+. |+++.+++||.+.++....................+ ...+.
T Consensus 174 --------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p------~~r~~ 239 (277)
T 4fc7_A 174 --------QVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASP------LQRLG 239 (277)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTST------TSSCB
T ss_pred --------cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCC------CCCCc
Confidence 1589999999999999888653 899999999999875311000001122223332221 22467
Q ss_pred eHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
..+|+|++++.++.. ...+|. +.++|.
T Consensus 240 ~p~dvA~~v~fL~s~~~~~itG~~i~vdGG 269 (277)
T 4fc7_A 240 NKTEIAHSVLYLASPLASYVTGAVLVADGG 269 (277)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHcCCccCCcCCCEEEECCC
Confidence 899999999999864 335664 566653
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.15 E-value=7.7e-10 Score=86.54 Aligned_cols=148 Identities=18% Similarity=0.135 Sum_probs=96.6
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..+++|+.++.++++++.. .+..++|++||..+..+.+.
T Consensus 105 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~------------- 171 (277)
T 3gvc_A 105 DKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGG------------- 171 (277)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC-------------
Confidence 8999999987541 12223467889999999999988753 44468999999755322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHH----HHHhCCCCcc-CCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQ----RLLQGSKDTQ-EHY 144 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~ 144 (232)
...|+.+|...|.+.+.++.+ .|+++.+++||.+.++... .... .......... ...
T Consensus 172 --------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 236 (277)
T 3gvc_A 172 --------TGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQ-------TAMAMFDGALGAGGARSMIARL 236 (277)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------HHHTCC------CCHHHHHHHH
T ss_pred --------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHH-------HhhhcchhhHHHHhhhhhhhcc
Confidence 158999999999999988765 5899999999999865210 0000 0000000000 001
Q ss_pred ccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 145 WLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 145 ~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
...+.+++|+|++++.++... ..+|. ++++|.
T Consensus 237 ~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG 271 (277)
T 3gvc_A 237 QGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGG 271 (277)
T ss_dssp HSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCc
Confidence 124788999999999998653 34564 667654
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.14 E-value=8.7e-10 Score=84.13 Aligned_cols=132 Identities=17% Similarity=0.070 Sum_probs=77.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+++.... ...+++++++|++.+++++|++||. .+|+..... .....+..+..+.
T Consensus 90 D~vv~~a~~~~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~-~~~~~~~~~-~~~~~~~~~~~~~----- 148 (236)
T 3qvo_A 90 DIVYANLTGEDL--------------DIQANSVIAAMKACDVKRLIFVLSL-GIYDEVPGK-FVEWNNAVIGEPL----- 148 (236)
T ss_dssp SEEEEECCSTTH--------------HHHHHHHHHHHHHTTCCEEEEECCC-CC-----------------CGGG-----
T ss_pred CEEEEcCCCCch--------------hHHHHHHHHHHHHcCCCEEEEEecc-eecCCCCcc-cccchhhcccchH-----
Confidence 789999986321 1347799999999999999999997 555543211 1112333222222
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVL 160 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 160 (232)
..|.. +|+.+ ++.+++++++||+.++++..... .. .... ......+++++|+|++++.
T Consensus 149 -~~~~~----~~~~l----~~~gi~~~~vrPg~i~~~~~~~~-~~--------~~~~----~~~~~~~i~~~DvA~~i~~ 206 (236)
T 3qvo_A 149 -KPFRR----AADAI----EASGLEYTILRPAWLTDEDIIDY-EL--------TSRN----EPFKGTIVSRKSVAALITD 206 (236)
T ss_dssp -HHHHH----HHHHH----HTSCSEEEEEEECEEECCSCCCC-EE--------ECTT----SCCSCSEEEHHHHHHHHHH
T ss_pred -HHHHH----HHHHH----HHCCCCEEEEeCCcccCCCCcce-EE--------eccC----CCCCCcEECHHHHHHHHHH
Confidence 24443 44443 35699999999999998753221 00 0000 0012368999999999999
Q ss_pred hhcCCC-CCc-eEEEec
Q 026820 161 LFETSA-ASG-RYLCTN 175 (232)
Q Consensus 161 ~~~~~~-~~~-~~~~~~ 175 (232)
++..+. ..+ .|++++
T Consensus 207 ll~~~~~~~g~~~~i~~ 223 (236)
T 3qvo_A 207 IIDKPEKHIGENIGINQ 223 (236)
T ss_dssp HHHSTTTTTTEEEEEEC
T ss_pred HHcCcccccCeeEEecC
Confidence 998876 334 566654
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.14 E-value=5.7e-10 Score=86.91 Aligned_cols=149 Identities=15% Similarity=0.079 Sum_probs=98.7
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||....... .+..+..+++|+.++.++++++.. .+..++|++||..+..+...
T Consensus 83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 149 (269)
T 3vtz_A 83 DILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKN------------- 149 (269)
T ss_dssp CEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT-------------
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCC-------------
Confidence 899999998654211 122356778999999999988653 45569999999854322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCC--------CCChhHHHHHHHHhCCCCccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQP--------YVNASGAVLQRLLQGSKDTQE 142 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 142 (232)
...|+.||...|.+.+.++.+. ++++.+++||.+.++.... ...........+....
T Consensus 150 --------~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 216 (269)
T 3vtz_A 150 --------AAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH----- 216 (269)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS-----
T ss_pred --------ChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcC-----
Confidence 1589999999999999988765 8999999999997642100 0001111222222211
Q ss_pred CcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 143 HYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
....+.+++|+|++++.++... ..+|. ++++|.
T Consensus 217 -p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 252 (269)
T 3vtz_A 217 -PMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG 252 (269)
T ss_dssp -TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -CCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCC
Confidence 1235778999999999998653 34564 677654
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.14 E-value=1.4e-09 Score=84.60 Aligned_cols=148 Identities=19% Similarity=0.149 Sum_probs=97.1
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccc-eeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSIS-SIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~-~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..+++|+.++.++++++. +.+..++|++||.+ ...+.+
T Consensus 101 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------- 167 (267)
T 1vl8_A 101 DTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMP------------- 167 (267)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSS-------------
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCC-------------
Confidence 79999999865411 112235678899999999988874 34567999999974 211110
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
. ...|+.+|...|.+.+.++.+ .|+++++++||.+.++.... ..........+....+ ...+
T Consensus 168 --~------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p------~~~~ 232 (267)
T 1vl8_A 168 --N------ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA-VFSDPEKLDYMLKRIP------LGRT 232 (267)
T ss_dssp --S------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH-HHTCHHHHHHHHHTCT------TSSC
T ss_pred --C------ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccc-cccChHHHHHHHhhCC------CCCC
Confidence 1 158999999999999988765 48999999999997653210 0000112222222221 1247
Q ss_pred eeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
++.+|+|++++.++... ..+|. +.++|.
T Consensus 233 ~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 263 (267)
T 1vl8_A 233 GVPEDLKGVAVFLASEEAKYVTGQIIFVDGG 263 (267)
T ss_dssp BCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHcCccccCCcCCeEEECCC
Confidence 88999999999998653 34564 556543
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.14 E-value=1.1e-10 Score=90.80 Aligned_cols=146 Identities=14% Similarity=0.079 Sum_probs=93.8
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++.+++ .+.+..++|++||..+.++.+.
T Consensus 103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~------------- 169 (266)
T 3grp_A 103 DILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPG------------- 169 (266)
T ss_dssp CEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------C-------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCC-------------
Confidence 79999999865411 11234677889999977776665 3445569999999855433211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+.++.... ........+....+ ...+.
T Consensus 170 --------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~p------~~r~~ 232 (266)
T 3grp_A 170 --------QTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK---LNEKQKEAIMAMIP------MKRMG 232 (266)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT---CCHHHHHHHHTTCT------TCSCB
T ss_pred --------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc---cCHHHHHHHHhcCC------CCCCc
Confidence 158999999999999888765 38999999999997653211 11222223333221 23567
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+.+|+|++++.++... ..+|. ++++|.
T Consensus 233 ~~edvA~~v~~L~s~~~~~itG~~i~vdGG 262 (266)
T 3grp_A 233 IGEEIAFATVYLASDEAAYLTGQTLHINGG 262 (266)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 8999999999998653 34564 566653
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.5e-10 Score=90.28 Aligned_cols=146 Identities=15% Similarity=0.100 Sum_probs=98.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++. +.+..++|++||.++..+.+.
T Consensus 107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 173 (270)
T 3ftp_A 107 NVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPG------------- 173 (270)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCC-------------
Confidence 79999999865411 222345678999999999999875 234458999999855443221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+..+.... ........+.... ....+.
T Consensus 174 --------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~------p~~r~~ 236 (270)
T 3ftp_A 174 --------QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG---LPQEQQTALKTQI------PLGRLG 236 (270)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH---SCHHHHHHHHTTC------TTCSCB
T ss_pred --------chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh---cCHHHHHHHHhcC------CCCCCC
Confidence 158999999999999888765 48999999999997542111 0111122222221 123578
Q ss_pred eHHhHHHHHHHhhcC--CCCCc-eEEEecC
Q 026820 150 HVKDVAKAQVLLFET--SAASG-RYLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~--~~~~~-~~~~~~~ 176 (232)
+++|+|++++.++.. ...+| .++++|.
T Consensus 237 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG 266 (270)
T 3ftp_A 237 SPEDIAHAVAFLASPQAGYITGTTLHVNGG 266 (270)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCCCcCCccCcEEEECCC
Confidence 899999999998854 33456 4677653
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.8e-10 Score=92.09 Aligned_cols=157 Identities=17% Similarity=0.163 Sum_probs=104.9
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHcC----------CCEEEEecccceeccCCCCCCCCcc
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKFG----------VRRVVLTSSISSIVPNPNWPQGKVI 66 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~----------~~~~i~~Ss~~~~~~~~~~~~~~~~ 66 (232)
|+|||+||..... ...+..+..+++|+.++.++++++...- -.++|++||.++..+...
T Consensus 116 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~------- 188 (322)
T 3qlj_A 116 DVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVG------- 188 (322)
T ss_dssp CEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBTT-------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCCC-------
Confidence 7999999987541 1222346788999999999999875331 138999999865443222
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCC
Q 026820 67 DETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEH 143 (232)
Q Consensus 67 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (232)
...|+.+|...+.+.+.++.+ .|+++.+++|| +..+......... .. .+.
T Consensus 189 --------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~---~~---------~~~ 241 (322)
T 3qlj_A 189 --------------QGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEM---MA---------TQD 241 (322)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC------------------
T ss_pred --------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhh---hh---------ccc
Confidence 158999999999999998876 58999999999 5443222111100 00 011
Q ss_pred cccCceeHHhHHHHHHHhhcCCC--CCce-EEEecCc------------------ccHHHHHHHHHhhC
Q 026820 144 YWLGAVHVKDVAKAQVLLFETSA--ASGR-YLCTNGI------------------YQFAEFAEKVSKLF 191 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~~------------------~s~~el~~~i~~~~ 191 (232)
..+.++.++|+|++++.++.... .+|. ++++|.. ++..|+++.+.+.+
T Consensus 242 ~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~ 310 (322)
T 3qlj_A 242 QDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLL 310 (322)
T ss_dssp --CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHh
Confidence 23356789999999999986432 3563 5565432 36788998888876
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=5.6e-10 Score=87.22 Aligned_cols=148 Identities=14% Similarity=0.061 Sum_probs=99.5
Q ss_pred CeEEEeecCCCC--------CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL--------DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||.... ....+..+..+++|+.++.++++++... .-.++|++||.+...+.+.
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 154 (275)
T 2pd4_A 86 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH----------- 154 (275)
T ss_dssp EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT-----------
T ss_pred CEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCC-----------
Confidence 789999998642 1122334678899999999999999765 1248999999744322111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+.+.++.+. |+++++++||.+.++..... .........+....+ ...
T Consensus 155 ----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~~~ 217 (275)
T 2pd4_A 155 ----------YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI-ADFRMILKWNEINAP------LRK 217 (275)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHST------TSS
T ss_pred ----------chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc-cccHHHHHHHHhcCC------cCC
Confidence 1489999999999999887664 89999999999987643221 111222222222211 113
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+.+.+|+|++++.++... ..+|. +.+++.
T Consensus 218 ~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg 249 (275)
T 2pd4_A 218 NVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG 249 (275)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 678999999999998643 34564 566554
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.5e-10 Score=87.66 Aligned_cols=139 Identities=16% Similarity=0.082 Sum_probs=82.8
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||........ +.....+++|+.++.++++++. +.+ .++|++||..+..+.+.
T Consensus 77 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~------------- 142 (245)
T 3e9n_A 77 DTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPG------------- 142 (245)
T ss_dssp SEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC-----------------------
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCC-------------
Confidence 7899999986542111 1235678899999888887764 334 58999999744322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+.+.++.+ .|+++.+++||.+.++.... ........ . ....++
T Consensus 143 --------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------~~~~~~~~----~--~~~~~~ 201 (245)
T 3e9n_A 143 --------NTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG-------LMDSQGTN----F--RPEIYI 201 (245)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------CCGGGS
T ss_pred --------chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh-------hhhhhhcc----c--ccccCC
Confidence 158999999999999988865 48999999999998753221 00000000 0 123578
Q ss_pred eHHhHHHHHHHhhcCCCCCceEEEe
Q 026820 150 HVKDVAKAQVLLFETSAASGRYLCT 174 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~~~~~~~~~ 174 (232)
+++|+|++++.++..+.....+++.
T Consensus 202 ~p~dvA~~i~~l~~~~~~~~~~~i~ 226 (245)
T 3e9n_A 202 EPKEIANAIRFVIDAGETTQITNVD 226 (245)
T ss_dssp CHHHHHHHHHHHHTSCTTEEEEEEE
T ss_pred CHHHHHHHHHHHHcCCCccceeeeE
Confidence 9999999999999877654455543
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.13 E-value=1.3e-10 Score=90.39 Aligned_cols=155 Identities=15% Similarity=0.108 Sum_probs=95.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHH----HHHHHcC---CCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVL----EAAKKFG---VRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~----~~~~~~~---~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||... ....+..+++|+.++..+. ..+.+.+ ..++|++||.++..+.+.
T Consensus 88 d~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 149 (267)
T 2gdz_A 88 DILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ-------------- 149 (267)
T ss_dssp CEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------
T ss_pred CEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCC--------------
Confidence 79999999864 3557889999988655544 4454432 468999999744221111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHH-----HHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhC-CCCccCCcccC
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFA-----EKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQG-SKDTQEHYWLG 147 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~-----~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 147 (232)
...|+.+|...|.+.+.++ ...|+++++++||.+.++.... ... .........- .....+.....
T Consensus 150 -------~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~ 220 (267)
T 2gdz_A 150 -------QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES-IEK-EENMGQYIEYKDHIKDMIKYYG 220 (267)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG-GGC-HHHHGGGGGGHHHHHHHHHHHC
T ss_pred -------CchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc-ccc-ccccchhhhHHHHHHHHhcccc
Confidence 1489999999999988742 2358999999999997642110 000 0000000000 00000001235
Q ss_pred ceeHHhHHHHHHHhhcCCCCCc-eEEEec-CcccHHH
Q 026820 148 AVHVKDVAKAQVLLFETSAASG-RYLCTN-GIYQFAE 182 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~~~~~-~~~~~~-~~~s~~e 182 (232)
+++++|+|++++.++.....+| .+++++ +.+++.|
T Consensus 221 ~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~ 257 (267)
T 2gdz_A 221 ILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD 257 (267)
T ss_dssp CBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred CCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence 7899999999999998766677 466664 4455444
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.12 E-value=9.3e-10 Score=86.33 Aligned_cols=152 Identities=17% Similarity=0.045 Sum_probs=98.3
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ....+..+..+++|+.++.++++++ ++.+..++|++||.++......
T Consensus 107 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~------------ 174 (283)
T 3v8b_A 107 DIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTT------------ 174 (283)
T ss_dssp CEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCS------------
T ss_pred CEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCC------------
Confidence 899999998542 1112233577899999999999988 4455569999999744221000
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-----cCC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-----QEH 143 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 143 (232)
+ ....|+.+|...+.+.+.++.+ .|+++.+++||.+..+.......... . ....+.. .+-
T Consensus 175 --~-----~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~----~~~~~~~~~~~~~p~ 242 (283)
T 3v8b_A 175 --P-----GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHE-E----ETAIPVEWPKGQVPI 242 (283)
T ss_dssp --T-----TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCH-H----HHSCCCBCTTCSCGG
T ss_pred --C-----CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccc-h----hhhhhhhhhhhcCcc
Confidence 0 1158999999999999998876 47999999999998765432111110 0 0000111 000
Q ss_pred cccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 144 YWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
....+...+|+|++++.++... ..+|. +.++|.
T Consensus 243 ~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 278 (283)
T 3v8b_A 243 TDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG 278 (283)
T ss_dssp GTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence 0134678999999999998653 34564 566554
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.12 E-value=1.6e-09 Score=83.12 Aligned_cols=145 Identities=21% Similarity=0.181 Sum_probs=98.1
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++.. .+..++|++||.+ .++.+.
T Consensus 79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~------------- 144 (245)
T 1uls_A 79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLG------------- 144 (245)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCC-------------
Confidence 79999999865311 1123356789999999999988754 2557999999985 443221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++++++||.+..+.... . .......+....+ ...+.
T Consensus 145 --------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~--~~~~~~~~~~~~p------~~~~~ 207 (245)
T 1uls_A 145 --------QANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-V--PEKVREKAIAATP------LGRAG 207 (245)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-S--CHHHHHHHHHTCT------TCSCB
T ss_pred --------chhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh-c--CHHHHHHHHhhCC------CCCCc
Confidence 148999999999998887765 48999999999997664321 1 1122222222211 11378
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+.+|+|++++.++... ..+|. +.++|.
T Consensus 208 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG 237 (245)
T 1uls_A 208 KPLEVAYAALFLLSDESSFITGQVLFVDGG 237 (245)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence 8999999999998653 34564 566553
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.12 E-value=4e-10 Score=86.84 Aligned_cols=139 Identities=14% Similarity=0.103 Sum_probs=96.8
Q ss_pred CeEEEeecCCCCCC-----CCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDD-----PKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||...... ..+.....+++|+.++.++++++... .-.++|++||..+.++.+.
T Consensus 89 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 154 (251)
T 3orf_A 89 DTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSG-------------- 154 (251)
T ss_dssp EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT--------------
T ss_pred CEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCC--------------
Confidence 78999999764311 11233577889999999999998764 1238999999855332211
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK-----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...|.+.+.++.+ .++++.+++||.+.++ +........ ....+
T Consensus 155 -------~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~-----------~~~~~~~~~------~~~~~ 210 (251)
T 3orf_A 155 -------MIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP-----------TNRKYMSDA------NFDDW 210 (251)
T ss_dssp -------BHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH-----------HHHHHCTTS------CGGGS
T ss_pred -------CchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc-----------chhhhcccc------ccccc
Confidence 158999999999999998876 4799999999988643 112221111 23357
Q ss_pred eeHHhHHHHHHHhhcC---CCCCce-EEE-ecCc
Q 026820 149 VHVKDVAKAQVLLFET---SAASGR-YLC-TNGI 177 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~---~~~~~~-~~~-~~~~ 177 (232)
++++|+|++++.++.. ...+|. +.+ .++.
T Consensus 211 ~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~ 244 (251)
T 3orf_A 211 TPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSK 244 (251)
T ss_dssp BCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETT
T ss_pred CCHHHHHHHHHHHhcCccccCCcceEEEEecCCc
Confidence 8899999999999977 444563 444 3443
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.9e-10 Score=89.70 Aligned_cols=148 Identities=16% Similarity=0.089 Sum_probs=97.9
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHHcCC--CEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKKFGV--RRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||.... ....+..+..+++|+.++.++++++...-. .++|++||.++..+.+.
T Consensus 130 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~-------------- 195 (294)
T 3r3s_A 130 DILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPH-------------- 195 (294)
T ss_dssp CEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTT--------------
T ss_pred CEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCC--------------
Confidence 799999998542 112223467889999999999999976532 38999999854322111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
...|+.+|...|.+.+.++.+. |+++.+++||.+.++...... ........+... .....+..
T Consensus 196 -------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~------~p~~r~~~ 261 (294)
T 3r3s_A 196 -------LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG-QTQDKIPQFGQQ------TPMKRAGQ 261 (294)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTT-SCGGGSTTTTTT------STTSSCBC
T ss_pred -------chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccC-CCHHHHHHHHhc------CCCCCCcC
Confidence 1589999999999999988764 899999999999875311000 000000000000 11235778
Q ss_pred HHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 151 VKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 151 v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
.+|+|++++.++... ..+| .++++|.
T Consensus 262 p~dvA~~v~~L~s~~~~~itG~~i~vdGG 290 (294)
T 3r3s_A 262 PAELAPVYVYLASQESSYVTAEVHGVCGG 290 (294)
T ss_dssp GGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 999999999988643 3456 4667653
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=5.2e-10 Score=87.74 Aligned_cols=150 Identities=17% Similarity=0.071 Sum_probs=99.0
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||...... ..+..+..+++|+.++.++++++... +..++|++||.+...+... +
T Consensus 109 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~ 174 (283)
T 1g0o_A 109 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP--------------K 174 (283)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS--------------S
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCC--------------C
Confidence 79999999865411 12334678899999999999999775 5569999999744222110 0
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCC-------CC-ChhHHHHHHHHh--CCCCcc
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQP-------YV-NASGAVLQRLLQ--GSKDTQ 141 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~-------~~-~~~~~~~~~~~~--~~~~~~ 141 (232)
...|+.+|...|.+.+.++.+ .|+++++++||.+.++.... .. .........+.. ..+
T Consensus 175 ------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--- 245 (283)
T 1g0o_A 175 ------HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP--- 245 (283)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT---
T ss_pred ------CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC---
Confidence 158999999999999988765 48999999999997652110 00 000111222222 111
Q ss_pred CCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 142 EHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 142 ~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
...+.+.+|+|++++.++... ..+|. +.++|.
T Consensus 246 ---~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG 280 (283)
T 1g0o_A 246 ---LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG 280 (283)
T ss_dssp ---TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ---CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCC
Confidence 124778999999999998653 34564 556543
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.11 E-value=7.9e-10 Score=85.96 Aligned_cols=149 Identities=17% Similarity=0.132 Sum_probs=95.1
Q ss_pred CeEEEeecCCCC-C----CCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-D----DPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... . ...+..+..+++|+.++..+++++ ++.+..++|++||.++..+.+.
T Consensus 94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 161 (267)
T 1iy8_A 94 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN------------ 161 (267)
T ss_dssp SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS------------
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCC------------
Confidence 799999997542 1 112234677899998888766654 4456679999999754322111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCC-----CCChhHHHHHHHHhCCCCccCC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQP-----YVNASGAVLQRLLQGSKDTQEH 143 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 143 (232)
...|+.+|...+.+.+.++.+ .|+++++++||.+.++.... ...........+....+
T Consensus 162 ---------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p----- 227 (267)
T 1iy8_A 162 ---------QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNP----- 227 (267)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCT-----
T ss_pred ---------CccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCC-----
Confidence 158999999999999888765 48999999999998653110 00000101112221111
Q ss_pred cccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 144 YWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
...+.+.+|+|++++.++... ..+|. +.++|.
T Consensus 228 -~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG 262 (267)
T 1iy8_A 228 -SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG 262 (267)
T ss_dssp -TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred -CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 124789999999999998654 34564 566553
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.2e-09 Score=84.48 Aligned_cols=149 Identities=16% Similarity=0.096 Sum_probs=100.3
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|++||+||...... ..+..+..+++|+.++.++++++... .-.++|++||.+...+.+.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 148 (255)
T 4eso_A 84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPG--------------- 148 (255)
T ss_dssp EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTT---------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCC---------------
Confidence 78999999875411 22334677899999999999998764 2248999999855322111
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCC-CCh-h-HHHHHHHHhCCCCccCCcccCc
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPY-VNA-S-GAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+. |+++.+++||.+..+..... ... . ..+........+ ...+
T Consensus 149 ------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~ 216 (255)
T 4eso_A 149 ------MSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITP------MKRN 216 (255)
T ss_dssp ------BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHST------TSSC
T ss_pred ------chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCC------CCCC
Confidence 1589999999999999988764 89999999999988754321 111 1 111111111111 2246
Q ss_pred eeHHhHHHHHHHhhcC-CCCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFET-SAASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~-~~~~~~-~~~~~~ 176 (232)
.+.+|+|++++.++.. ...+|. ++++|.
T Consensus 217 ~~pedvA~~v~~L~s~~~~itG~~i~vdGG 246 (255)
T 4eso_A 217 GTADEVARAVLFLAFEATFTTGAKLAVDGG 246 (255)
T ss_dssp BCHHHHHHHHHHHHHTCTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHcCcCcCccCCEEEECCC
Confidence 7899999999998864 334564 567653
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.11 E-value=3.9e-10 Score=87.59 Aligned_cols=149 Identities=14% Similarity=0.038 Sum_probs=96.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++.. .+..++|++||.++..+.+
T Consensus 76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------- 141 (264)
T 2dtx_A 76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK-------------- 141 (264)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCT--------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCC--------------
Confidence 79999999865411 2223467889999999999888754 3557999999974422111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHcC--CcEEEEcCCCeeCCCCCCCCC----hhH----HHHHHHHhCCCCccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKNG--TDVVAIHPATSLGPFPQPYVN----ASG----AVLQRLLQGSKDTQE 142 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~i~G~~~~~~~~----~~~----~~~~~~~~~~~~~~~ 142 (232)
+ ...|+.+|...|.+.+.++.+.+ +++++++||.+.++....... ... .....+....
T Consensus 142 -~------~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 209 (264)
T 2dtx_A 142 -N------ASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEH----- 209 (264)
T ss_dssp -T------BHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHS-----
T ss_pred -C------chhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcC-----
Confidence 1 15899999999999999887654 899999999986542100000 000 1111111111
Q ss_pred CcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 143 HYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
....+++++|+|++++.++... ..+|. +.++|.
T Consensus 210 -p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 245 (264)
T 2dtx_A 210 -PMQRIGKPQEVASAVAFLASREASFITGTCLYVDGG 245 (264)
T ss_dssp -TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence 1235889999999999998653 34564 566653
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.11 E-value=4.8e-10 Score=86.00 Aligned_cols=146 Identities=14% Similarity=0.111 Sum_probs=97.4
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHcCC--CEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKFGV--RRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||..... ...+..+..+++|+.++.++++++...-. .++|++||..+..+.+.
T Consensus 72 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--------------- 136 (244)
T 4e4y_A 72 DGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPN--------------- 136 (244)
T ss_dssp EEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTT---------------
T ss_pred CEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCC---------------
Confidence 7899999986541 11223456789999999999999876521 38999999754322111
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHH-----------HHHHHHhCCCCc
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGA-----------VLQRLLQGSKDT 140 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~-----------~~~~~~~~~~~~ 140 (232)
...|+.||...|.+.+.++.+ .|+++.+++||.+.++.... .... .........
T Consensus 137 ------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--- 204 (244)
T 4e4y_A 137 ------SFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRN---LIQKYANNVGISFDEAQKQEEKEF--- 204 (244)
T ss_dssp ------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHH---HHHHHHHHHTCCHHHHHHHHHTTS---
T ss_pred ------CchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHH---HHHhhhhhcCCCHHHHHHHHhhcC---
Confidence 158999999999999988863 48999999999997542110 0000 111111111
Q ss_pred cCCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
....+.+++|+|++++.++... ..+|. ++++|.
T Consensus 205 ---p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 240 (244)
T 4e4y_A 205 ---PLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGG 240 (244)
T ss_dssp ---TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ---CCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCC
Confidence 1235788999999999999653 34564 566653
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.11 E-value=6.4e-10 Score=87.13 Aligned_cols=147 Identities=18% Similarity=0.165 Sum_probs=89.2
Q ss_pred CeEEEeecCCCC------CCCCCchhhhHHHHHHHHHHHHHHHHHc----C---CCEEEEecccceeccCCCCCCCCccC
Q 026820 1 MGVFHLASPNTL------DDPKDPEKELLIPAVQGTLNVLEAAKKF----G---VRRVVLTSSISSIVPNPNWPQGKVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~---~~~~i~~Ss~~~~~~~~~~~~~~~~~ 67 (232)
|+|||+||.... ....+..+..+++|+.++.++++++... + ..++|++||.++.++.+.
T Consensus 109 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~-------- 180 (280)
T 4da9_A 109 DCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPE-------- 180 (280)
T ss_dssp CEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------C--------
T ss_pred CEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCC--------
Confidence 899999998421 1122344677889999999998887543 2 348999999855433221
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCc
Q 026820 68 ETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHY 144 (232)
Q Consensus 68 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+..+..... .......+..+. ..
T Consensus 181 -------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~-----~p 239 (280)
T 4da9_A 181 -------------RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV---SGKYDGLIESGL-----VP 239 (280)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------
T ss_pred -------------ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhc---chhHHHHHhhcC-----CC
Confidence 148999999999999998876 589999999999987643211 011111111101 01
Q ss_pred ccCceeHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 145 WLGAVHVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 145 ~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
...+..++|+|++++.++.... .+|. ++++|.
T Consensus 240 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 274 (280)
T 4da9_A 240 MRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGG 274 (280)
T ss_dssp --CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTT
T ss_pred cCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 2347789999999999986543 4564 566653
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.10 E-value=4.3e-10 Score=89.78 Aligned_cols=167 Identities=10% Similarity=0.003 Sum_probs=97.8
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc----------CCCEEEEecccceeccCCCCCCCCcc
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF----------GVRRVVLTSSISSIVPNPNWPQGKVI 66 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----------~~~~~i~~Ss~~~~~~~~~~~~~~~~ 66 (232)
|+|||+||...... ..+.....+++|+.|+.++++++... +..++|++||.+++.+.+.
T Consensus 89 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~------- 161 (319)
T 3ioy_A 89 SILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS------- 161 (319)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS-------
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC-------
Confidence 78999999865411 22334678899999999999887543 2347999999855332211
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhC---CCCc
Q 026820 67 DETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQG---SKDT 140 (232)
Q Consensus 67 ~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~---~~~~ 140 (232)
...|+.||...+.+.+.++.+ .|+++++++||.|.++..... ......+...... ....
T Consensus 162 --------------~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~ 226 (319)
T 3ioy_A 162 --------------PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASD-DIRPDALKGEVKPVDKTAVE 226 (319)
T ss_dssp --------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC----------------------------
T ss_pred --------------CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccccc-ccCchhhcccccchhHHHHH
Confidence 148999999777776666543 489999999999987643321 1111111100000 0000
Q ss_pred -cCCcccCceeHHhHHHHHHHhhcCCCCCceEEEecCc--ccHHHHHHHHHhhCC
Q 026820 141 -QEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGI--YQFAEFAEKVSKLFP 192 (232)
Q Consensus 141 -~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~~~--~s~~el~~~i~~~~p 192 (232)
........++++|+|+.++.+++++. .++.++.. -.+++....+.+.+|
T Consensus 227 ~~~~~~~~~~~pe~vA~~~~~al~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~ 278 (319)
T 3ioy_A 227 RLAGVHEFGMEPDVIGARVIEAMKANR---LHIFSHPDHKEELREVFDEIIAEYQ 278 (319)
T ss_dssp --CCGGGSSBCHHHHHHHHHHHHHTTC---SEECCCSTTHHHHHHHHHHHHHTCC
T ss_pred HHHHhhhcCCCHHHHHHHHHHHHHcCC---CEEEcCHHHHHHHHHHHHHHHHhhh
Confidence 11111123799999999999997653 24444322 245666666666676
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.8e-10 Score=89.10 Aligned_cols=147 Identities=15% Similarity=0.062 Sum_probs=99.8
Q ss_pred CeEEEeecCCCC--------CCCCCchhhhHHHHHHHHHHHHHHHHHc------------CCCEEEEecccceeccCCCC
Q 026820 1 MGVFHLASPNTL--------DDPKDPEKELLIPAVQGTLNVLEAAKKF------------GVRRVVLTSSISSIVPNPNW 60 (232)
Q Consensus 1 D~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~------------~~~~~i~~Ss~~~~~~~~~~ 60 (232)
|++||+||.... ....+..+..+++|+.++.++++++... +..++|++||..+..+.+
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-- 158 (257)
T 3tl3_A 81 RIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI-- 158 (257)
T ss_dssp EEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH--
T ss_pred CEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC--
Confidence 789999997532 0123345788899999999999988643 224899999974422111
Q ss_pred CCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCC
Q 026820 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGS 137 (232)
Q Consensus 61 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 137 (232)
....|+.+|...+.+.+.++.+ .|+.+.+++||.+..+.... ........+....
T Consensus 159 -------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~ 216 (257)
T 3tl3_A 159 -------------------GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS---LPEEARASLGKQV 216 (257)
T ss_dssp -------------------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------CHHHHHHHHHTS
T ss_pred -------------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh---ccHHHHHHHHhcC
Confidence 1258999999999999888765 48999999999997764322 1122222222222
Q ss_pred CCccCCcccCceeHHhHHHHHHHhhcCCCCCce-EEEecC
Q 026820 138 KDTQEHYWLGAVHVKDVAKAQVLLFETSAASGR-YLCTNG 176 (232)
Q Consensus 138 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~~ 176 (232)
+. ...+.+.+|+|++++.++..+..+|. +.++|.
T Consensus 217 ~~-----~~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG 251 (257)
T 3tl3_A 217 PH-----PSRLGNPDEYGALAVHIIENPMLNGEVIRLDGA 251 (257)
T ss_dssp SS-----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred CC-----CCCccCHHHHHHHHHHHhcCCCCCCCEEEECCC
Confidence 11 13578899999999999988777784 566653
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.10 E-value=9e-10 Score=84.98 Aligned_cols=150 Identities=19% Similarity=0.120 Sum_probs=94.1
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++..+.+++ ++.+ .++|++||.++..+.+
T Consensus 82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~-------------- 146 (253)
T 1hxh_A 82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIE-------------- 146 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCT--------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCC--------------
Confidence 79999999865411 12234567889988777666654 4456 7999999974422111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---c--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---N--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
+ ...|+.+|...|.+.+.++.+ . +++++++|||.++++....... .......+..... ......
T Consensus 147 -~------~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~--~~p~~~ 215 (253)
T 1hxh_A 147 -Q------YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLP--KGVSKEMVLHDPK--LNRAGR 215 (253)
T ss_dssp -T------BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSC--TTCCHHHHBCBTT--TBTTCC
T ss_pred -C------CccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccc--hhhhHHHHhhhhc--cCccCC
Confidence 1 158999999999999888765 3 8999999999998753110000 0000110111000 001124
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+.+++|+|++++.++... ..+|. +.++|.
T Consensus 216 ~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 247 (253)
T 1hxh_A 216 AYMPERIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp EECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred CCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence 789999999999998654 24564 566654
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=8.6e-10 Score=84.85 Aligned_cols=135 Identities=12% Similarity=0.075 Sum_probs=87.0
Q ss_pred CeEEEeecCCC-C----CCCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNT-L----DDPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||... . ....+..+..+++|+.++.++++++. +.+..++|++||.++..+.+
T Consensus 76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------- 142 (248)
T 3asu_A 76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYA------------- 142 (248)
T ss_dssp CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT-------------
T ss_pred CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCC-------------
Confidence 79999999753 1 11122346788999999999988875 34557999999974422111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeC-CCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLG-PFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
. ...|+.+|...|.+.+.++.+. |+++.+++||.+.| +................. ....
T Consensus 143 --~------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~---------~~~~ 205 (248)
T 3asu_A 143 --G------GNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY---------QNTV 205 (248)
T ss_dssp --T------CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-------------------------------C
T ss_pred --C------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHH---------hccC
Confidence 1 1589999999999999987653 89999999999985 321100000000000000 0113
Q ss_pred ceeHHhHHHHHHHhhcCC
Q 026820 148 AVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~ 165 (232)
++..+|+|++++.++..+
T Consensus 206 ~~~p~dvA~~v~~l~s~~ 223 (248)
T 3asu_A 206 ALTPEDVSEAVWWVSTLP 223 (248)
T ss_dssp CBCHHHHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHhcCC
Confidence 468999999999998754
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.2e-09 Score=85.43 Aligned_cols=149 Identities=15% Similarity=0.153 Sum_probs=96.5
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||....... .+..+..+++|+.++.++++++. +.+..++|++||..+..+.+.
T Consensus 103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 169 (277)
T 4dqx_A 103 DVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIAD------------- 169 (277)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTT-------------
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCC-------------
Confidence 799999998654211 12335677899999999998874 334459999999744222111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCC---CCChhHHHHHHHHhCCCCccCCccc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQP---YVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
...|+.+|...|.+.+.++.+. |+++.+++||.+..+.... ...........+.... ...
T Consensus 170 --------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 235 (277)
T 4dqx_A 170 --------RTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARA------VMD 235 (277)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTS------TTC
T ss_pred --------ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcC------ccc
Confidence 1589999999999999887654 8999999999997542000 0000011111111111 123
Q ss_pred CceeHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 147 GAVHVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
.+.+++|+|++++.++.... .+|. ++++|.
T Consensus 236 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 268 (277)
T 4dqx_A 236 RMGTAEEIAEAMLFLASDRSRFATGSILTVDGG 268 (277)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred CCcCHHHHHHHHHHHhCCccCCCcCCEEEECCc
Confidence 57789999999999986543 4564 567654
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=1.7e-09 Score=84.73 Aligned_cols=148 Identities=12% Similarity=0.027 Sum_probs=100.9
Q ss_pred CeEEEeecCCCCC---------CCCCchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCC
Q 026820 1 MGVFHLASPNTLD---------DPKDPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDE 68 (232)
Q Consensus 1 D~Vih~a~~~~~~---------~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E 68 (232)
|+|||+||..... ...+.....+++|+.++.++++++... +..++|++||.++..+.+.
T Consensus 105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 175 (280)
T 3nrc_A 105 DAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPS--------- 175 (280)
T ss_dssp CEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTT---------
T ss_pred CEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCC---------
Confidence 7999999986531 223334568899999999999998643 2358999999755322111
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcc
Q 026820 69 TSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+..+..... ..............+ .
T Consensus 176 ------------~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~ 236 (280)
T 3nrc_A 176 ------------YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGI-SNFKKMLDYNAMVSP------L 236 (280)
T ss_dssp ------------THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGC-TTHHHHHHHHHHHST------T
T ss_pred ------------chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcC-cchHHHHHHHHhcCC------C
Confidence 158999999999999988765 589999999999987643321 122233333322221 2
Q ss_pred cCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 146 LGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
..+...+|+|++++.++... ..+|. ++++|.
T Consensus 237 ~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG 270 (280)
T 3nrc_A 237 KKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAG 270 (280)
T ss_dssp CSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred CCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCC
Confidence 24678999999999998753 35564 566653
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.09 E-value=3.2e-10 Score=88.08 Aligned_cols=148 Identities=16% Similarity=0.131 Sum_probs=97.7
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ....+..+..+++|+.++.++++++.. .+ .++|++||.....+.+.
T Consensus 90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~------------ 156 (264)
T 3ucx_A 90 DVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAK------------ 156 (264)
T ss_dssp SEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTT------------
T ss_pred cEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCc------------
Confidence 799999987532 111223467789999999999988643 24 58999999855332211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC--------ChhHHHHHHHHhCCCCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV--------NASGAVLQRLLQGSKDT 140 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~--------~~~~~~~~~~~~~~~~~ 140 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+.++...... .........+..+.
T Consensus 157 ---------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 224 (264)
T 3ucx_A 157 ---------YGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS--- 224 (264)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS---
T ss_pred ---------cHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccC---
Confidence 148999999999999988876 5899999999999875311000 00011112222221
Q ss_pred cCCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
....+.+++|+|++++.++... ..+|. ++++|.
T Consensus 225 ---p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 260 (264)
T 3ucx_A 225 ---DLKRLPTEDEVASAILFMASDLASGITGQALDVNCG 260 (264)
T ss_dssp ---SSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ---CcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 1235789999999999998653 34564 567654
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.09 E-value=7.4e-10 Score=86.36 Aligned_cols=148 Identities=14% Similarity=0.082 Sum_probs=98.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++.. .+..++|++||.....+.+.
T Consensus 105 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~------------- 171 (271)
T 4ibo_A 105 DILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARAT------------- 171 (271)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTT-------------
T ss_pred CEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCC-------------
Confidence 79999999865411 2223456789999999999877653 34568999999755332211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+..+..... .........+....+ ...+.
T Consensus 172 --------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~~r~~ 236 (271)
T 4ibo_A 172 --------VAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQAL-IDNPEFDAWVKARTP------AKRWG 236 (271)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH-HHCHHHHHHHHHHST------TCSCB
T ss_pred --------chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhc-ccCHHHHHHHHhcCC------CCCCc
Confidence 158999999999999998765 489999999999976532110 000112222222221 22467
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
.++|+|++++.++... ..+|. ++++|.
T Consensus 237 ~pedva~~v~~L~s~~~~~itG~~i~vdGG 266 (271)
T 4ibo_A 237 KPQELVGTAVFLSASASDYVNGQIIYVDGG 266 (271)
T ss_dssp CGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCccccCCCCcEEEECCC
Confidence 8999999999988643 34564 567654
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=1.7e-09 Score=85.38 Aligned_cols=148 Identities=14% Similarity=0.013 Sum_probs=101.4
Q ss_pred CeEEEeecCCCC--------CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL--------DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||.... ....+.....+++|+.++.++++++... ...++|++||.++..+.+.
T Consensus 110 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~----------- 178 (296)
T 3k31_A 110 DFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPH----------- 178 (296)
T ss_dssp SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT-----------
T ss_pred CEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCC-----------
Confidence 799999998641 1222345678899999999999998764 2248999999755332211
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+.+.++.+. |+++.+++||.+..+.... ..........+....+ ...
T Consensus 179 ----------~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~p------~~r 241 (296)
T 3k31_A 179 ----------YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSG-ISDFHYILTWNKYNSP------LRR 241 (296)
T ss_dssp ----------TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCS-CHHHHHHHHHHHHHST------TSS
T ss_pred ----------chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhc-ccchHHHHHHHHhcCC------CCC
Confidence 1489999999999999887654 8999999999998765432 1112222222222221 124
Q ss_pred ceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
+...+|+|++++.++.. ...+|. ++++|.
T Consensus 242 ~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 273 (296)
T 3k31_A 242 NTTLDDVGGAALYLLSDLGRGTTGETVHVDCG 273 (296)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCHHHHHHHHHHHcCCccCCccCCEEEECCC
Confidence 67799999999999965 345664 567653
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.09 E-value=6e-10 Score=86.27 Aligned_cols=149 Identities=16% Similarity=0.195 Sum_probs=89.3
Q ss_pred CeEEEeecCCCC-CC----CCCchhhhHHHHHHHHHHHHHHHHHc----C----CCEEEEecccceeccCCCCCCCCccC
Q 026820 1 MGVFHLASPNTL-DD----PKDPEKELLIPAVQGTLNVLEAAKKF----G----VRRVVLTSSISSIVPNPNWPQGKVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~-~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~----~~~~i~~Ss~~~~~~~~~~~~~~~~~ 67 (232)
|+|||+||.... .. ..+.....+++|+.++.++++++... + ..++|++||.....+.+.
T Consensus 85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------- 156 (261)
T 3n74_A 85 DILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPN-------- 156 (261)
T ss_dssp CEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTT--------
T ss_pred CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCC--------
Confidence 799999998652 11 12234567889999999888886432 1 236999999744222111
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCCh-hHHHHHHHHhCCCCccCC
Q 026820 68 ETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNA-SGAVLQRLLQGSKDTQEH 143 (232)
Q Consensus 68 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 143 (232)
...|+.+|...+.+.+.++.+ .++++.+++||.+.++........ .......+... .
T Consensus 157 -------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~ 217 (261)
T 3n74_A 157 -------------LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDS------I 217 (261)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------C
T ss_pred -------------ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhc------C
Confidence 147999999999999998876 489999999999987643221100 00111111111 1
Q ss_pred cccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 144 YWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
....+++++|+|++++.++... ..+|. ++++|.
T Consensus 218 ~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG 253 (261)
T 3n74_A 218 PMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGG 253 (261)
T ss_dssp TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCC
Confidence 2235889999999999998543 34564 566653
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.09 E-value=7.6e-10 Score=86.52 Aligned_cols=146 Identities=13% Similarity=0.063 Sum_probs=96.2
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCC----CEEEEecccceeccCCCCCCCCccCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGV----RRVVLTSSISSIVPNPNWPQGKVIDE 68 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~----~~~i~~Ss~~~~~~~~~~~~~~~~~E 68 (232)
|+|||+||..... ...+..+..+++|+.++.++++++. +.+. .++|++||.++..+.+.
T Consensus 107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~--------- 177 (276)
T 2b4q_A 107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGE--------- 177 (276)
T ss_dssp SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCC---------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCC---------
Confidence 7999999976541 1222346788999999988887764 3343 69999999744322111
Q ss_pred CCCCCcccccccch-hHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHh--CCCCccC
Q 026820 69 TSWTDLDFCKSHKI-WYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQ--GSKDTQE 142 (232)
Q Consensus 69 ~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~--~~~~~~~ 142 (232)
.. .|+.+|...|.+.+.++.+ .|+++++++||.+..+.... ........+.. ..+
T Consensus 178 ------------~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~p---- 238 (276)
T 2b4q_A 178 ------------QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH---IANDPQALEADSASIP---- 238 (276)
T ss_dssp ------------SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH---HHHCHHHHHHHHHTST----
T ss_pred ------------CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh---cchhHHHHHHhhcCCC----
Confidence 03 7999999999999988765 48999999999997653210 01111111111 111
Q ss_pred CcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 143 HYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
...+.+.+|+|++++.++... ..+|. +.++|.
T Consensus 239 --~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 273 (276)
T 2b4q_A 239 --MGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGG 273 (276)
T ss_dssp --TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --CCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence 124789999999999998654 34564 566543
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.3e-09 Score=84.13 Aligned_cols=146 Identities=14% Similarity=0.111 Sum_probs=96.0
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||.... ....+..+..+++|+.++.++++++.. .+..++|++||.++..+.
T Consensus 89 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--------------- 153 (253)
T 2nm0_A 89 EVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS--------------- 153 (253)
T ss_dssp SEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH---------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC---------------
Confidence 799999998643 123445678899999999999987653 356799999997442211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
+ ....|+.+|...|.+.+.++.+ .++++++++||.+..+.... ........+....+ ...++
T Consensus 154 -~-----~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~p------~~~~~ 218 (253)
T 2nm0_A 154 -A-----GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV---LTDEQRANIVSQVP------LGRYA 218 (253)
T ss_dssp -H-----HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------CHHHHHTTCT------TCSCB
T ss_pred -C-----CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh---cCHHHHHHHHhcCC------CCCCc
Confidence 1 1158999999999999988765 47999999999986553211 00011111211111 12478
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
..+|+|++++.++... ..+|. +.++|.
T Consensus 219 ~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG 248 (253)
T 2nm0_A 219 RPEEIAATVRFLASDDASYITGAVIPVDGG 248 (253)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCccccCCcCcEEEECCc
Confidence 9999999999998654 34564 556543
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.09 E-value=6.4e-10 Score=86.03 Aligned_cols=149 Identities=18% Similarity=0.149 Sum_probs=96.5
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCC-CEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGV-RRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..+++|+.++.++++++.. .+. .++|++||.++..+.+.
T Consensus 83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 150 (258)
T 3a28_C 83 DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPI------------ 150 (258)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTT------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCC------------
Confidence 79999999865411 1223457789999999999988764 355 79999999754322111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC--------ChhHHHHHHHHhCCCCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV--------NASGAVLQRLLQGSKDT 140 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~--------~~~~~~~~~~~~~~~~~ 140 (232)
...|+.+|...|.+.+.++.+ .++++.+++||.+..+...... .........+....
T Consensus 151 ---------~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 218 (258)
T 3a28_C 151 ---------LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSI--- 218 (258)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTC---
T ss_pred ---------chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcC---
Confidence 158999999999999988765 3899999999998654210000 00000111111111
Q ss_pred cCCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
....+.+.+|+|++++.++... ..+|. +.++|.
T Consensus 219 ---p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 254 (258)
T 3a28_C 219 ---ALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGG 254 (258)
T ss_dssp ---TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred ---CCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence 1124789999999999998654 34564 566543
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.08 E-value=5.3e-10 Score=87.14 Aligned_cols=146 Identities=15% Similarity=0.042 Sum_probs=96.5
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+.....+++|+.++.++++++.. .+..++|++||..+..+.+.
T Consensus 109 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 175 (271)
T 4iin_A 109 SYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMG------------- 175 (271)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-------------
T ss_pred CEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCC-------------
Confidence 79999999876411 1223467889999999998887643 35568999999855433221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...|.+.+.++.+ .++++.+++||.+..+.... ........+... .....+.
T Consensus 176 --------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~------~~~~~~~ 238 (271)
T 4iin_A 176 --------QTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN---LKDELKADYVKN------IPLNRLG 238 (271)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---------------CGGG------CTTCSCB
T ss_pred --------chHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh---hcHHHHHHHHhc------CCcCCCc
Confidence 158999999999999988876 58999999999997653221 001111111111 1223578
Q ss_pred eHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
+++|+|++++.++.... .+|. ++++|.
T Consensus 239 ~p~dvA~~i~~l~s~~~~~itG~~i~vdGG 268 (271)
T 4iin_A 239 SAKEVAEAVAFLLSDHSSYITGETLKVNGG 268 (271)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCCCcCCCcCCEEEeCCC
Confidence 99999999999986543 4564 566553
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.08 E-value=4.2e-10 Score=88.07 Aligned_cols=138 Identities=15% Similarity=0.099 Sum_probs=89.0
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHH----HHHHHHHHHHcCC--CEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQG----TLNVLEAAKKFGV--RRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~----~~~l~~~~~~~~~--~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||...... ........+++|+.+ +++++..+++.+. .++|++||.++ +...
T Consensus 113 D~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~-~~~~------------ 179 (279)
T 1xg5_A 113 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSG-HRVL------------ 179 (279)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGG-TSCC------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhh-cccC------------
Confidence 79999999865411 122346778999999 7777777777765 69999999743 2110
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcc
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK-----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (232)
+..+ ...|+.+|...|.+.+.++.+ .++++++++||.+.++................ ...
T Consensus 180 ~~~~------~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~---------~~~ 244 (279)
T 1xg5_A 180 PLSV------THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT---------YEQ 244 (279)
T ss_dssp SCGG------GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH---------HC-
T ss_pred CCCC------CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhh---------ccc
Confidence 0111 258999999999998887654 47999999999997653100000000001100 012
Q ss_pred cCceeHHhHHHHHHHhhcCCC
Q 026820 146 LGAVHVKDVAKAQVLLFETSA 166 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~~ 166 (232)
..+++++|+|++++.++..+.
T Consensus 245 ~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 245 MKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp --CBCHHHHHHHHHHHHHSCT
T ss_pred ccCCCHHHHHHHHHHHhcCCc
Confidence 247899999999999997654
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.08 E-value=2.9e-09 Score=82.65 Aligned_cols=147 Identities=16% Similarity=0.102 Sum_probs=98.3
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++ .+.+..++|++||.+..++...
T Consensus 103 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 169 (267)
T 3gdg_A 103 DAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFP------------- 169 (267)
T ss_dssp SEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSS-------------
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCC-------------
Confidence 79999999875421 12234678899999999999987 3445569999999755332210
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHcC--CcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKNG--TDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
.+ ...|+.+|...+.+.+.++.+.+ +.+.++.||.+..+.... ........+.... ....+.+
T Consensus 170 ~~------~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~------~~~r~~~ 234 (267)
T 3gdg_A 170 QE------QTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDF---VPKETQQLWHSMI------PMGRDGL 234 (267)
T ss_dssp SC------CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGG---SCHHHHHHHHTTS------TTSSCEE
T ss_pred CC------CCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhh---CCHHHHHHHHhcC------CCCCCcC
Confidence 01 15899999999999999887753 789999999987543221 1112222222221 1235788
Q ss_pred HHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 151 VKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 151 v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
++|++++++.++... ..+|. ++++|
T Consensus 235 ~~dva~~~~~l~s~~~~~itG~~i~vdg 262 (267)
T 3gdg_A 235 AKELKGAYVYFASDASTYTTGADLLIDG 262 (267)
T ss_dssp THHHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred HHHHHhHhheeecCccccccCCEEEECC
Confidence 999999999998653 34564 56654
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.07 E-value=1.4e-09 Score=84.60 Aligned_cols=154 Identities=16% Similarity=0.087 Sum_probs=100.5
Q ss_pred CeEEEeecCCCC--------C-CCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTL--------D-DPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~--------~-~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|+|||+||.... . .........+++|+.++.++++++... ...++|++||.++..+.+.
T Consensus 94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~---------- 163 (271)
T 3ek2_A 94 DGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPN---------- 163 (271)
T ss_dssp EEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT----------
T ss_pred CEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCC----------
Confidence 789999998642 0 222334678899999999999998764 2248999999755332211
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
...|+.+|...+.+.+.++.+. |+.+.+++||.+..+.... ..........+....+ ..
T Consensus 164 -----------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~------~~ 225 (271)
T 3ek2_A 164 -----------YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASG-IKSFGKILDFVESNSP------LK 225 (271)
T ss_dssp -----------TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CC-CHHHHHHHHHHHHHST------TS
T ss_pred -----------ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhc-ccchHHHHHHHHhcCC------cC
Confidence 1489999999999999887653 8999999999998764332 1122233333322221 22
Q ss_pred CceeHHhHHHHHHHhhcC--CCCCce-EEEecC-cccHHH
Q 026820 147 GAVHVKDVAKAQVLLFET--SAASGR-YLCTNG-IYQFAE 182 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~-~~s~~e 182 (232)
.+..++|+|++++.++.. ...+|. ++++|. .+++.+
T Consensus 226 ~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~ 265 (271)
T 3ek2_A 226 RNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGG 265 (271)
T ss_dssp SCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCC
T ss_pred CCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhh
Confidence 467899999999999875 335664 567653 344433
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.07 E-value=3.1e-09 Score=81.90 Aligned_cols=148 Identities=17% Similarity=0.145 Sum_probs=98.9
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||...... ..+..+..+++|+.++.++++++... +..++|++||.+...+.+.
T Consensus 93 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------- 157 (255)
T 3icc_A 93 DILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPD--------------- 157 (255)
T ss_dssp EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTT---------------
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCC---------------
Confidence 78999999865411 11223567789999999999998764 3348999999754322111
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
...|+.+|...+.+.+.++.+ .++++.+++||.+..+....... ............ ....+.++
T Consensus 158 ------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~ 224 (255)
T 3icc_A 158 ------FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS-DPMMKQYATTIS------AFNRLGEV 224 (255)
T ss_dssp ------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTT-SHHHHHHHHHTS------TTSSCBCH
T ss_pred ------cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcc-cHHHHHhhhccC------CcCCCCCH
Confidence 158999999999999988765 38999999999998765432211 111111111121 12357789
Q ss_pred HhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 152 KDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 152 ~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+|+++++..++... ..+|. +.++|.
T Consensus 225 ~dva~~~~~l~s~~~~~~tG~~i~vdgG 252 (255)
T 3icc_A 225 EDIADTAAFLASPDSRWVTGQLIDVSGG 252 (255)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred HHHHHHHHHHhCcccCCccCCEEEecCC
Confidence 99999999988543 34564 566553
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.07 E-value=7.4e-10 Score=86.22 Aligned_cols=147 Identities=14% Similarity=0.059 Sum_probs=97.6
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+.....+++|+.++.++++++.. .+..++|++||..+..+...
T Consensus 105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 171 (269)
T 3gk3_A 105 DVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFG------------- 171 (269)
T ss_dssp SEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-------------
T ss_pred CEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCC-------------
Confidence 79999999875411 1223456789999999999988743 45568999999855433221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+..+..... .. ...... .........+.
T Consensus 172 --------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~----~~~~~~-~~~~~~~~~~~ 235 (269)
T 3gk3_A 172 --------QANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV---PQ----DVLEAK-ILPQIPVGRLG 235 (269)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------------CC-SGGGCTTSSCB
T ss_pred --------cchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh---ch----hHHHHH-hhhcCCcCCcc
Confidence 158999999999999888765 389999999999976643221 00 111101 00001123567
Q ss_pred eHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
+++|+|++++.++.... .+|. ++++|.
T Consensus 236 ~p~dvA~~v~~L~s~~~~~itG~~i~vdgG 265 (269)
T 3gk3_A 236 RPDEVAALIAFLCSDDAGFVTGADLAINGG 265 (269)
T ss_dssp CHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCCCcCCeeCcEEEECCC
Confidence 89999999999986543 4564 667653
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.3e-09 Score=85.18 Aligned_cols=147 Identities=14% Similarity=0.099 Sum_probs=98.0
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc----CC-CEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF----GV-RRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..+++|+.++.++++++... +. .++|++||.+...+...
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~------------ 178 (276)
T 3r1i_A 111 DIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIP------------ 178 (276)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCS------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCC------------
Confidence 79999999876521 12223556789999999999887542 32 58999999744322110
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
.+ ...|+.+|...+.+.+.++.+ .++++.+++||.+..+.... .......+....+ ...+
T Consensus 179 -~~------~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~----~~~~~~~~~~~~p------~~r~ 241 (276)
T 3r1i_A 179 -QQ------VSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP----LADYHALWEPKIP------LGRM 241 (276)
T ss_dssp -SC------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG----GGGGHHHHGGGST------TSSC
T ss_pred -CC------cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc----chHHHHHHHhcCC------CCCC
Confidence 01 158999999999999998876 58999999999998764322 1111222222211 1247
Q ss_pred eeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
...+|+|++++.++... ..+|. ++++|.
T Consensus 242 ~~pedvA~~v~fL~s~~~~~itG~~i~vdGG 272 (276)
T 3r1i_A 242 GRPEELTGLYLYLASAASSYMTGSDIVIDGG 272 (276)
T ss_dssp BCGGGSHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHcCccccCccCcEEEECcC
Confidence 78999999999998643 34564 566654
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.4e-09 Score=82.80 Aligned_cols=125 Identities=18% Similarity=0.119 Sum_probs=81.2
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+.....+++|+.++.++++++ ++.+.+++|++||.++..+.+
T Consensus 80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------------- 145 (234)
T 2ehd_A 80 SALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFK-------------- 145 (234)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCT--------------
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCC--------------
Confidence 79999999765311 12234678899999997666554 455677999999974421110
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
+ ...|+.+|...|.+.+.++.+ .|++++++|||.+..+.... . . .. +.++
T Consensus 146 -~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~----~----~~--------~~~~ 198 (234)
T 2ehd_A 146 -G------GAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN----T----P----GQ--------AWKL 198 (234)
T ss_dssp -T------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------------------------------------C
T ss_pred -C------CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc----c----c----cc--------cCCC
Confidence 1 158999999999998887654 48999999999886542110 0 0 00 1157
Q ss_pred eHHhHHHHHHHhhcCCC
Q 026820 150 HVKDVAKAQVLLFETSA 166 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~ 166 (232)
..+|+|++++.++..+.
T Consensus 199 ~~~dvA~~~~~l~~~~~ 215 (234)
T 2ehd_A 199 KPEDVAQAVLFALEMPG 215 (234)
T ss_dssp CHHHHHHHHHHHHHSCC
T ss_pred CHHHHHHHHHHHhCCCc
Confidence 89999999999987653
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.06 E-value=1.8e-09 Score=84.33 Aligned_cols=153 Identities=19% Similarity=0.152 Sum_probs=98.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||...... ..+..+..+++|+.++.++++++.. .+ -.++|++||.++..+.+.
T Consensus 103 d~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 170 (277)
T 3tsc_A 103 DIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPF------------ 170 (277)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCSS------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCCC------------
Confidence 89999999876511 2223467789999999999988543 23 358999999855322111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc--cCC-cc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT--QEH-YW 145 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~ 145 (232)
...|+.+|...+.+.+.++.+. |+++.+++||.+..+.... ................. ... ..
T Consensus 171 ---------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p 239 (277)
T 3tsc_A 171 ---------MIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG--DMVTAVGQAMETNPQLSHVLTPFLP 239 (277)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH--HHHHHHHHHHHTCGGGTTTTCCSSS
T ss_pred ---------chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc--hhhhhhhhcccccHHHHHHhhhccC
Confidence 1589999999999999888763 8999999999997653221 01111111111111110 111 12
Q ss_pred cCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 146 LGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
..+.+.+|+|++++.++... ..+|. +.++|.
T Consensus 240 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 273 (277)
T 3tsc_A 240 DWVAEPEDIADTVCWLASDESRKVTAAQIPVDQG 273 (277)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCC
Confidence 24789999999999998653 34564 566654
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.06 E-value=1.4e-09 Score=84.37 Aligned_cols=136 Identities=13% Similarity=0.042 Sum_probs=93.6
Q ss_pred CeEEEeecCCC-C----CCCCCchhhhHHHHHHHHHHHHHHHHHc----------C-----CCEEEEecccceeccCCCC
Q 026820 1 MGVFHLASPNT-L----DDPKDPEKELLIPAVQGTLNVLEAAKKF----------G-----VRRVVLTSSISSIVPNPNW 60 (232)
Q Consensus 1 D~Vih~a~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----------~-----~~~~i~~Ss~~~~~~~~~~ 60 (232)
|+|||+||... . ....+.....+++|+.++.++++++... + ..++|++||..+..+...
T Consensus 104 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~- 182 (267)
T 1sny_A 104 NVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNT- 182 (267)
T ss_dssp SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCC-
T ss_pred cEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCCC-
Confidence 79999999865 2 1112334567899999999999987543 1 368999999754322110
Q ss_pred CCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCC
Q 026820 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGS 137 (232)
Q Consensus 61 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 137 (232)
..+ ...|+.+|...|.+++.++.+ .+++++++|||.+..+....
T Consensus 183 -----------~~~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------------- 229 (267)
T 1sny_A 183 -----------DGG------MYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS---------------- 229 (267)
T ss_dssp -----------SCC------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT----------------
T ss_pred -----------CCC------chHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC----------------
Confidence 001 148999999999999988766 58999999999986542110
Q ss_pred CCccCCcccCceeHHhHHHHHHHhhcCC--CCCceE-EEecCcc
Q 026820 138 KDTQEHYWLGAVHVKDVAKAQVLLFETS--AASGRY-LCTNGIY 178 (232)
Q Consensus 138 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~-~~~~~~~ 178 (232)
...+..+|+++.++.++... ...|.+ .+.|..+
T Consensus 230 --------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~ 265 (267)
T 1sny_A 230 --------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL 265 (267)
T ss_dssp --------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred --------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence 13467899999999988653 234554 3344443
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.06 E-value=1.3e-09 Score=85.38 Aligned_cols=149 Identities=15% Similarity=0.089 Sum_probs=97.4
Q ss_pred CeEEEeecCCCCCC--------CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCC
Q 026820 1 MGVFHLASPNTLDD--------PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDE 68 (232)
Q Consensus 1 D~Vih~a~~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E 68 (232)
|+|||+||...... ..+..+..+++|+.++.++++++.. .+ .++|++||..+..+. .
T Consensus 88 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-~--------- 156 (280)
T 1xkq_A 88 DVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA-Q--------- 156 (280)
T ss_dssp CEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC-C---------
T ss_pred CEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC-C---------
Confidence 79999999865311 1123467789999999999988764 24 699999997442211 0
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC-Ch-----hHHHHHHHHhCCCC
Q 026820 69 TSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV-NA-----SGAVLQRLLQGSKD 139 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~-~~-----~~~~~~~~~~~~~~ 139 (232)
+ ....|+.+|...|.+.+.++.+ .|+++++++||.+.++...... .. .......+....
T Consensus 157 -----~-----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 224 (280)
T 1xkq_A 157 -----P-----DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECI-- 224 (280)
T ss_dssp -----C-----SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTC--
T ss_pred -----C-----cccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCC--
Confidence 0 1158999999999999988754 5899999999999876421100 00 001111111111
Q ss_pred ccCCcccCceeHHhHHHHHHHhhcCC---CCCce-EEEecC
Q 026820 140 TQEHYWLGAVHVKDVAKAQVLLFETS---AASGR-YLCTNG 176 (232)
Q Consensus 140 ~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~~-~~~~~~ 176 (232)
....+.+++|+|++++.++... ..+|. +.++|.
T Consensus 225 ----p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG 261 (280)
T 1xkq_A 225 ----PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG 261 (280)
T ss_dssp ----TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred ----CCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence 1235789999999999998643 35564 566654
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.05 E-value=4.5e-10 Score=86.59 Aligned_cols=143 Identities=14% Similarity=0.092 Sum_probs=75.9
Q ss_pred CeEEEeecCCCC-------CCCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTL-------DDPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|+|||+||.... ....+.....+++|+.++.++++++ .+.+..++|++||..+ +..
T Consensus 88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~------------ 154 (253)
T 3qiv_A 88 DYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAA-WLY------------ 154 (253)
T ss_dssp CEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------------
T ss_pred CEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccc-cCC------------
Confidence 799999998421 1122234678899999966666654 4445568999999743 210
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
.+.|+.+|...|.+.+.++.+. ++++.+++||.+.++..... ....+...+..+. ...
T Consensus 155 -----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~------~~~ 215 (253)
T 3qiv_A 155 -----------SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT--TPKEMVDDIVKGL------PLS 215 (253)
T ss_dssp ----------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------------------------------
T ss_pred -----------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc--CcHHHHHHHhccC------CCC
Confidence 1379999999999999988775 79999999999988753321 1111222222221 122
Q ss_pred CceeHHhHHHHHHHhhcCCC--CCc-eEEEec
Q 026820 147 GAVHVKDVAKAQVLLFETSA--ASG-RYLCTN 175 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~~--~~~-~~~~~~ 175 (232)
.+..++|++++++.++.... .+| .+++++
T Consensus 216 ~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg 247 (253)
T 3qiv_A 216 RMGTPDDLVGMCLFLLSDEASWITGQIFNVDG 247 (253)
T ss_dssp ----CCHHHHHHHHHHSGGGTTCCSCEEEC--
T ss_pred CCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence 46678999999999986543 356 466654
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.05 E-value=6.5e-10 Score=85.88 Aligned_cols=149 Identities=18% Similarity=0.098 Sum_probs=95.6
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||..... ...+..+..+++|+.++.++++++.. .+ ..++|++||....++.+.
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 148 (256)
T 1geg_A 81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE------------ 148 (256)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC------------
Confidence 7999999976431 11223356789999999888877654 24 469999999755333211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCC---h-----hHHHHHHHHhCCCCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVN---A-----SGAVLQRLLQGSKDT 140 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~---~-----~~~~~~~~~~~~~~~ 140 (232)
...|+.+|...|.+.+.++.+ .|+++++++||.+.++....... . .......+....
T Consensus 149 ---------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 216 (256)
T 1geg_A 149 ---------LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI--- 216 (256)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC---
T ss_pred ---------chhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcC---
Confidence 158999999999999988765 48999999999997652110000 0 000011111111
Q ss_pred cCCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
....+.+.+|+|++++.++... ..+|. +.++|.
T Consensus 217 ---p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG 252 (256)
T 1geg_A 217 ---TLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG 252 (256)
T ss_dssp ---TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred ---CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence 1124789999999999998654 34564 566543
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.4e-09 Score=82.50 Aligned_cols=149 Identities=17% Similarity=0.082 Sum_probs=97.5
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHcCC--CEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKFGV--RRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|++||+||...... ..+..+..+++|+.++.++++++...-. .++|++||...... .. .+
T Consensus 98 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~-~~-------------~~ 163 (270)
T 3is3_A 98 DIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF-SV-------------PK 163 (270)
T ss_dssp CEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC-CC-------------TT
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC-CC-------------CC
Confidence 79999999875421 2233467789999999999999876522 38999999732100 00 01
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCC-------C--CChhHHHHHHHHhCCCCccC
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQP-------Y--VNASGAVLQRLLQGSKDTQE 142 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~-------~--~~~~~~~~~~~~~~~~~~~~ 142 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+..+.... . ..........+....
T Consensus 164 ------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 232 (270)
T 3is3_A 164 ------HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHAS----- 232 (270)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHS-----
T ss_pred ------CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcC-----
Confidence 158999999999999998876 48999999999998754210 0 000011111111111
Q ss_pred CcccCceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 143 HYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
....+.+.+|+|++++.++... ..+|. ++++|
T Consensus 233 -p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 267 (270)
T 3is3_A 233 -PLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDG 267 (270)
T ss_dssp -TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred -CCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCC
Confidence 1224678999999999998643 34564 56654
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.2e-09 Score=85.02 Aligned_cols=152 Identities=15% Similarity=0.130 Sum_probs=95.7
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||....... .+..+..+++|+.++.++++++. +.+..++|++||..+..+.+.
T Consensus 87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 153 (267)
T 3t4x_A 87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQE------------- 153 (267)
T ss_dssp SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTT-------------
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCc-------------
Confidence 799999998754111 12234568999999777776653 445569999999854322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCC--------CCChhHHHHHHHHhCCCCcc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQP--------YVNASGAVLQRLLQGSKDTQ 141 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~--------~~~~~~~~~~~~~~~~~~~~ 141 (232)
...|+.+|...+.+.+.++.+. ++++.++.||.+..+.... ................ .
T Consensus 154 --------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 222 (267)
T 3t4x_A 154 --------MAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKEN---R 222 (267)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHH---C
T ss_pred --------chHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhcc---C
Confidence 1589999999999999988764 6899999999886531000 0000011111111110 0
Q ss_pred CC-cccCceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 142 EH-YWLGAVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 142 ~~-~~~~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
+. ....+.+++|+|++++.++.. ...+|. ++++|.
T Consensus 223 ~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG 261 (267)
T 3t4x_A 223 PTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGG 261 (267)
T ss_dssp TTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcccccCccCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence 00 123688999999999998864 335664 667653
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=1.1e-09 Score=84.27 Aligned_cols=146 Identities=16% Similarity=0.097 Sum_probs=97.1
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHH----HHHcC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEA----AKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~----~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..+++|+.++.+++++ +++.+ ..++|++||.....+.+.
T Consensus 82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 149 (247)
T 3rwb_A 82 DILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPN------------ 149 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTT------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCC------------
Confidence 79999999865411 1223467889999999999988 44444 468999999855443222
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCC-hhHHHHHHHHhCCCCccCCcccC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVN-ASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+..+....... ....+.... . ....
T Consensus 150 ---------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~---~------~~~r 211 (247)
T 3rwb_A 150 ---------MAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML---Q------AMKG 211 (247)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH---S------SSCS
T ss_pred ---------chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc---c------ccCC
Confidence 158999999999999988876 58999999999997643211000 011111110 0 1124
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+...+|+++++..++... ..+|. ++++|.
T Consensus 212 ~~~pedva~~v~~L~s~~~~~itG~~i~vdGG 243 (247)
T 3rwb_A 212 KGQPEHIADVVSFLASDDARWITGQTLNVDAG 243 (247)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 678999999999998654 34564 566653
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=3e-09 Score=82.58 Aligned_cols=148 Identities=13% Similarity=0.099 Sum_probs=100.6
Q ss_pred CeEEEeecCCCC--------CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL--------DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||.... ....+.....+++|+.++.++++++... .-.++|++||.++..+.+.
T Consensus 89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 157 (266)
T 3oig_A 89 HGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPN----------- 157 (266)
T ss_dssp CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTT-----------
T ss_pred eEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCC-----------
Confidence 789999998651 1112234567899999999999998765 2248999999755332111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+.+.++.+. |+++.+++||.+..+..... .........+....+ ...
T Consensus 158 ----------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~------~~~ 220 (266)
T 3oig_A 158 ----------YNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGI-SDFNSILKDIEERAP------LRR 220 (266)
T ss_dssp ----------THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC-TTHHHHHHHHHHHST------TSS
T ss_pred ----------cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc-cchHHHHHHHHhcCC------CCC
Confidence 1589999999999999887653 89999999999987543321 122233333322221 124
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+...+|+|++++.++... ..+|. +.++|.
T Consensus 221 ~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG 252 (266)
T 3oig_A 221 TTTPEEVGDTAAFLFSDMSRGITGENLHVDSG 252 (266)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCHHHHHHHHHHHcCCchhcCcCCEEEECCC
Confidence 678999999999999753 34564 566653
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.05 E-value=6.2e-09 Score=82.94 Aligned_cols=151 Identities=15% Similarity=0.123 Sum_probs=98.3
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..+++|+.++.++++++.. .+ -.++|++||..+..+.+.
T Consensus 137 D~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~------------ 204 (317)
T 3oec_A 137 DILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPG------------ 204 (317)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTT------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCC------------
Confidence 89999999875411 2223456789999999999988743 22 347999999855332211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCC----------CChhHHHHHHHHhCCC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPY----------VNASGAVLQRLLQGSK 138 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~----------~~~~~~~~~~~~~~~~ 138 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+.++..... ...............
T Consensus 205 ---------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 274 (317)
T 3oec_A 205 ---------QSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQL- 274 (317)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTT-
T ss_pred ---------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhh-
Confidence 158999999999999998876 389999999999987531100 000000001111110
Q ss_pred CccCCcccCceeHHhHHHHHHHhhcCC--CCCc-eEEEecC
Q 026820 139 DTQEHYWLGAVHVKDVAKAQVLLFETS--AASG-RYLCTNG 176 (232)
Q Consensus 139 ~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~-~~~~~~~ 176 (232)
......+++++|+|++++.++... ..+| .++++|.
T Consensus 275 ---~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG 312 (317)
T 3oec_A 275 ---TLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312 (317)
T ss_dssp ---CSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ---ccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcc
Confidence 111256889999999999988543 3456 4667654
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.05 E-value=5.2e-09 Score=82.71 Aligned_cols=150 Identities=16% Similarity=0.054 Sum_probs=98.3
Q ss_pred CeEEEeecCCCCCC-----CCCchhhhHHHHHHHHHHHHHHHHHc-----CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLDD-----PKDPEKELLIPAVQGTLNVLEAAKKF-----GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||...... ..+..+..+++|+.++.++++++... +..++|++||.++..+.+.
T Consensus 119 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~----------- 187 (299)
T 3t7c_A 119 DIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAEN----------- 187 (299)
T ss_dssp CEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTT-----------
T ss_pred CEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC-----------
Confidence 79999999865421 12234678899999999999986432 2458999999855322211
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCC-----------ChhHHHHHHHHhC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYV-----------NASGAVLQRLLQG 136 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~-----------~~~~~~~~~~~~~ 136 (232)
...|+.+|...+.+.+.++.+. |+++.+++||.+..+...... .............
T Consensus 188 ----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (299)
T 3t7c_A 188 ----------IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQM 257 (299)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHH
T ss_pred ----------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhh
Confidence 1589999999999999888764 899999999999876532100 0000000000000
Q ss_pred CCCccCCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 137 SKDTQEHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 137 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
. .....+...+|+|++++.++... ..+|. ++++|.
T Consensus 258 ~-----~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG 295 (299)
T 3t7c_A 258 H-----VLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295 (299)
T ss_dssp S-----SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred c-----ccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCC
Confidence 0 01135788999999999998653 34564 566653
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.04 E-value=1.2e-09 Score=86.21 Aligned_cols=155 Identities=14% Similarity=0.099 Sum_probs=99.2
Q ss_pred CeEEEeecCCCCCC------CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLDD------PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~~------~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||...... ..+..+..+++|+.++.++++++.. .+ .++|++||.++..+. .
T Consensus 108 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~-~----------- 174 (297)
T 1xhl_A 108 DILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA-H----------- 174 (297)
T ss_dssp CEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC-C-----------
T ss_pred CEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC-C-----------
Confidence 79999999765311 1123457889999999999988754 34 699999997442211 0
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC-Chh-----HHHHHHHHhCCCCcc
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV-NAS-----GAVLQRLLQGSKDTQ 141 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~-~~~-----~~~~~~~~~~~~~~~ 141 (232)
+ ....|+.+|...|.+.+.++.+ .|+++++++||.+.++...... ... ......+... .
T Consensus 175 ---~-----~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 242 (297)
T 1xhl_A 175 ---S-----GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKEC----I 242 (297)
T ss_dssp ---T-----TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT----C
T ss_pred ---C-----CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhc----C
Confidence 0 0148999999999999888754 5899999999999875321100 000 0111111111 1
Q ss_pred CCcccCceeHHhHHHHHHHhhcCC---CCCce-EEEecC-cccHHH
Q 026820 142 EHYWLGAVHVKDVAKAQVLLFETS---AASGR-YLCTNG-IYQFAE 182 (232)
Q Consensus 142 ~~~~~~~i~v~D~a~~~~~~~~~~---~~~~~-~~~~~~-~~s~~e 182 (232)
....+...+|+|++++.++... ..+|. +.++|. .+...+
T Consensus 243 --p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~ 286 (297)
T 1xhl_A 243 --PVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGM 286 (297)
T ss_dssp --TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGG
T ss_pred --CCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccc
Confidence 1224789999999999998643 45664 566654 344333
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.04 E-value=2.1e-09 Score=83.88 Aligned_cols=138 Identities=17% Similarity=0.093 Sum_probs=86.9
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHHc----C--CCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKKF----G--VRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|+|||+||.... ....+..+..+++|+.++.++++++... + -.++|++||..+..+.+.
T Consensus 104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~---------- 173 (272)
T 4dyv_A 104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPY---------- 173 (272)
T ss_dssp CEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTT----------
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCC----------
Confidence 899999998643 1122234678899999988888876532 2 348999999754322111
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
...|+.+|...+.+.+.++.+ .++++.+++||.+..+..... ........ ......
T Consensus 174 -----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~----~~~~~~~~------~~~~~~ 232 (272)
T 4dyv_A 174 -----------SAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKM----KAGVPQAD------LSIKVE 232 (272)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------------------
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhh----cccchhhh------hccccc
Confidence 158999999999999988765 489999999999876532110 00000000 001123
Q ss_pred CceeHHhHHHHHHHhhcCCCCCc
Q 026820 147 GAVHVKDVAKAQVLLFETSAASG 169 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~~~~~ 169 (232)
.++.++|+|++++.++..+....
T Consensus 233 ~~~~pedvA~~v~fL~s~~~~~~ 255 (272)
T 4dyv_A 233 PVMDVAHVASAVVYMASLPLDAN 255 (272)
T ss_dssp ---CHHHHHHHHHHHHHSCTTSC
T ss_pred CCCCHHHHHHHHHHHhCCCCcCc
Confidence 47899999999999998776544
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.04 E-value=2.6e-09 Score=82.73 Aligned_cols=151 Identities=17% Similarity=0.100 Sum_probs=94.5
Q ss_pred CeEEEeecCCCC-CC----CCCchhhhHHHHHHHHHHHHHHHHHcCC--CEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTL-DD----PKDPEKELLIPAVQGTLNVLEAAKKFGV--RRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~-~~----~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||.... .. ..+..+..+++|+.++.++++++...-. .++|++||..+......
T Consensus 88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 153 (259)
T 3edm_A 88 HGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGP-------------- 153 (259)
T ss_dssp EEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCST--------------
T ss_pred CEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCC--------------
Confidence 789999997622 11 1112367789999999999999976522 38999999744311111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
....|+.+|...+.+.+.++.+. ++++.++.||.+..+...... .......+... .....+.++
T Consensus 154 ------~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~------~p~~r~~~p 219 (259)
T 3edm_A 154 ------GALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFT--KPEVRERVAGA------TSLKREGSS 219 (259)
T ss_dssp ------TCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC------------------------------CCBCH
T ss_pred ------CcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccccccc--ChHHHHHHHhc------CCCCCCcCH
Confidence 01589999999999999988764 489999999999765322110 01111111111 012357789
Q ss_pred HhHHHHHHHhhcCC--CCCc-eEEEecCccc
Q 026820 152 KDVAKAQVLLFETS--AASG-RYLCTNGIYQ 179 (232)
Q Consensus 152 ~D~a~~~~~~~~~~--~~~~-~~~~~~~~~s 179 (232)
+|+|++++.++... ..+| .++++|....
T Consensus 220 edva~~v~~L~s~~~~~itG~~i~vdGg~~~ 250 (259)
T 3edm_A 220 EDVAGLVAFLASDDAAYVTGACYDINGGVLF 250 (259)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESBCSSB
T ss_pred HHHHHHHHHHcCccccCccCCEEEECCCcCC
Confidence 99999999998654 3456 4677765543
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=4e-09 Score=83.13 Aligned_cols=148 Identities=13% Similarity=0.061 Sum_probs=98.4
Q ss_pred CeEEEeecCCC----C----CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNT----L----DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~----~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||... . ....+.....+++|+.++.++++++... .-.++|++||.++..+.+.
T Consensus 111 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~----------- 179 (293)
T 3grk_A 111 DFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPN----------- 179 (293)
T ss_dssp SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTT-----------
T ss_pred CEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCc-----------
Confidence 79999999864 1 1222334678899999999999998764 2248999999755332211
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+..+..... .........+....+ ...
T Consensus 180 ----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~~r 242 (293)
T 3grk_A 180 ----------YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI-GDFRYILKWNEYNAP------LRR 242 (293)
T ss_dssp ----------TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------CCHHHHHHHHHHHST------TSS
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc-cchHHHHHHHHhcCC------CCC
Confidence 148999999999999988865 489999999999987643321 111222222222221 124
Q ss_pred ceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+...+|+|++++.++... ..+|. ++++|.
T Consensus 243 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 274 (293)
T 3grk_A 243 TVTIDEVGDVGLYFLSDLSRSVTGEVHHADSG 274 (293)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCHHHHHHHHHHHcCccccCCcceEEEECCC
Confidence 678999999999998653 35564 567653
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1e-09 Score=85.29 Aligned_cols=151 Identities=13% Similarity=0.010 Sum_probs=97.0
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..+..+..+++|+.++.++++++.. .+..++|++||..+..+.+.
T Consensus 89 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 155 (265)
T 3lf2_A 89 SILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPH------------- 155 (265)
T ss_dssp SEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTT-------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCC-------------
Confidence 79999999865411 1223467789999999999998753 34458999999755322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCC------C-CChhHHHHHHHHhCCCCccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQP------Y-VNASGAVLQRLLQGSKDTQE 142 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~------~-~~~~~~~~~~~~~~~~~~~~ 142 (232)
...|+.+|...+.+.+.++.+. |+++.+++||.+.++.... . ......+...+......
T Consensus 156 --------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 224 (265)
T 3lf2_A 156 --------MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQI--- 224 (265)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTC---
T ss_pred --------chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCC---
Confidence 1589999999999999888654 8999999999997642100 0 00001111111111001
Q ss_pred CcccCceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 143 HYWLGAVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
....+...+|+|++++.++.. ...+|. +.++|.
T Consensus 225 -p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG 260 (265)
T 3lf2_A 225 -PLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGG 260 (265)
T ss_dssp -TTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSS
T ss_pred -CcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCC
Confidence 112467899999999999864 335664 566553
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-09 Score=85.22 Aligned_cols=148 Identities=16% Similarity=0.110 Sum_probs=97.6
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc----C-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF----G-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... ..+..+..+++|+.++.++++++... + ..++|++||.....+.+.
T Consensus 100 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 167 (266)
T 4egf_A 100 DVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPD------------ 167 (266)
T ss_dssp SEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT------------
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCC------------
Confidence 79999999876411 12224567899999999999887532 2 348999999854322111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+..+...... ........+....+ ...+
T Consensus 168 ---------~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~p------~~r~ 231 (266)
T 4egf_A 168 ---------HYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVW-GDEAKSAPMIARIP------LGRF 231 (266)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHT-CSHHHHHHHHTTCT------TSSC
T ss_pred ---------ChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhc-cChHHHHHHHhcCC------CCCC
Confidence 158999999999999988876 4899999999999764211000 00112222222221 2246
Q ss_pred eeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
...+|+|++++.++.. ...+|. ++++|.
T Consensus 232 ~~p~dva~~v~~L~s~~~~~itG~~i~vdGG 262 (266)
T 4egf_A 232 AVPHEVSDAVVWLASDAASMINGVDIPVDGG 262 (266)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCchhcCccCcEEEECCC
Confidence 7899999999999865 334564 566653
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.6e-09 Score=82.79 Aligned_cols=129 Identities=17% Similarity=0.100 Sum_probs=86.2
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ....+.....+++|+.++.++++++.. .+..++|++||.++..+...
T Consensus 108 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 175 (262)
T 3rkr_A 108 DVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVAD------------ 175 (262)
T ss_dssp SEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTT------------
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCC------------
Confidence 799999998332 112223466889999999999988643 45569999999744222111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...|.+.+.++.+ .|+++.+++||.+..+.... .. .. .....+
T Consensus 176 ---------~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------~~----~~------~~~~~~ 229 (262)
T 3rkr_A 176 ---------GAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG-------LS----AK------KSALGA 229 (262)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------C
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc-------cc----cc------cccccC
Confidence 158999999999999988765 58999999999986542111 00 00 012246
Q ss_pred eeHHhHHHHHHHhhcCCCC
Q 026820 149 VHVKDVAKAQVLLFETSAA 167 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~ 167 (232)
+..+|+|++++.++.....
T Consensus 230 ~~p~dvA~~v~~l~s~~~~ 248 (262)
T 3rkr_A 230 IEPDDIADVVALLATQADQ 248 (262)
T ss_dssp CCHHHHHHHHHHHHTCCTT
T ss_pred CCHHHHHHHHHHHhcCccc
Confidence 7899999999999976543
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.9e-09 Score=83.04 Aligned_cols=135 Identities=15% Similarity=0.177 Sum_probs=85.3
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHH----HcCCC-EEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAK----KFGVR-RVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~-~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||.... ....+..+..+++|+.++.++++++. +.+.. ++|++||..+..+.+.
T Consensus 99 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~----------- 167 (272)
T 2nwq_A 99 RGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPG----------- 167 (272)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTT-----------
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCC-----------
Confidence 799999997542 11122346678999999888777764 44556 9999999744221111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...|.+.+.++.+ .|+++++++||.+.++.................. ...
T Consensus 168 ----------~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~---------~~~ 228 (272)
T 2nwq_A 168 ----------SHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYA---------GAH 228 (272)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------------CCC
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhc---------cCC
Confidence 148999999999999988765 4899999999999765321100000000000000 112
Q ss_pred ceeHHhHHHHHHHhhcCC
Q 026820 148 AVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~ 165 (232)
++..+|+|++++.++..+
T Consensus 229 ~~~pedvA~~v~~l~s~~ 246 (272)
T 2nwq_A 229 PIQPEDIAETIFWIMNQP 246 (272)
T ss_dssp CBCHHHHHHHHHHHHTSC
T ss_pred CCCHHHHHHHHHHHhCCC
Confidence 478999999999999754
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.02 E-value=1.6e-08 Score=80.94 Aligned_cols=145 Identities=13% Similarity=0.009 Sum_probs=97.9
Q ss_pred CeEEEeecCCCCCCC------------------CCchhhhHHHHHHHHHHHHHHHHH----cC------CCEEEEecccc
Q 026820 1 MGVFHLASPNTLDDP------------------KDPEKELLIPAVQGTLNVLEAAKK----FG------VRRVVLTSSIS 52 (232)
Q Consensus 1 D~Vih~a~~~~~~~~------------------~~~~~~~~~~nv~~~~~l~~~~~~----~~------~~~~i~~Ss~~ 52 (232)
|+|||+||....... .+.....+++|+.++.++++++.. .+ ..++|++||..
T Consensus 144 D~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~ 223 (328)
T 2qhx_A 144 DVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 223 (328)
T ss_dssp CEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTT
T ss_pred CEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchh
Confidence 799999998654111 122346789999999999988753 34 46899999974
Q ss_pred eeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHH
Q 026820 53 SIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAV 129 (232)
Q Consensus 53 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~ 129 (232)
+..+.+ . ...|+.+|...+.+.+.++.+. |+.+++++||.+..+. . . ....
T Consensus 224 ~~~~~~---------------~------~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~-~---~~~~ 277 (328)
T 2qhx_A 224 TNQPLL---------------G------YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M---PPAV 277 (328)
T ss_dssp TTSCCT---------------T------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C-S---CHHH
T ss_pred hccCCC---------------C------cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c-c---cHHH
Confidence 422111 1 1589999999999999887653 8999999999998765 2 1 1223
Q ss_pred HHHHHhCCCCccCCcccCceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 130 LQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
...+....+. + ..+...+|+|++++.++.. ...+|. +.++|.
T Consensus 278 ~~~~~~~~p~--~---~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG 322 (328)
T 2qhx_A 278 WEGHRSKVPL--Y---QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 322 (328)
T ss_dssp HHHHHTTCTT--T---TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHhhCCC--C---CCCCCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence 3333322211 1 1367899999999999864 334564 566553
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.9e-09 Score=82.09 Aligned_cols=147 Identities=17% Similarity=0.116 Sum_probs=95.2
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|++||+||....... .+..+..+++|+.++.++++++... .-.++|++||..+..+.+.
T Consensus 107 D~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------- 171 (267)
T 3u5t_A 107 DVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPS--------------- 171 (267)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTT---------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCC---------------
Confidence 789999998754211 1123567789999999999988654 2248999999755332211
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
...|+.+|...+.+.+.++.+. |+++.++.||.+..+..... ........+.... ....+..+
T Consensus 172 ------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~------p~~r~~~p 237 (267)
T 3u5t_A 172 ------YGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEG--KSDEVRDRFAKLA------PLERLGTP 237 (267)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-------------CHHHHHTSS------TTCSCBCH
T ss_pred ------chHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccccc--CCHHHHHHHHhcC------CCCCCcCH
Confidence 1489999999999999998764 89999999999976532110 0011112222221 12247789
Q ss_pred HhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 152 KDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
+|+|++++.++.... .+|. +.++|.
T Consensus 238 edvA~~v~~L~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 238 QDIAGAVAFLAGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp HHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred HHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 999999999986533 4564 566553
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.01 E-value=2.8e-09 Score=81.30 Aligned_cols=124 Identities=17% Similarity=0.157 Sum_probs=86.1
Q ss_pred CeEEEeecCCCCCCC-----CCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDP-----KDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~-----~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||....... .+..+..+++|+.++.++++++... ...++|++||.++..+.+
T Consensus 74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------------- 138 (236)
T 1ooe_A 74 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP--------------- 138 (236)
T ss_dssp EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT---------------
T ss_pred CEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCC---------------
Confidence 789999997653111 1223677889999999999998764 224899999975432211
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc-----CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN-----GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
+ ...|+.+|...|.+.+.++.+. |+++++++||.+.++. ....... .....+
T Consensus 139 ~------~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~-----------~~~~~~~------~~~~~~ 195 (236)
T 1ooe_A 139 S------MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-----------NRKWMPN------ADHSSW 195 (236)
T ss_dssp T------BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-----------HHHHSTT------CCGGGC
T ss_pred C------cHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc-----------hhhcCCC------cccccc
Confidence 1 1589999999999999988654 4999999999986541 1111111 012245
Q ss_pred eeHHhHHHHHHHhh
Q 026820 149 VHVKDVAKAQVLLF 162 (232)
Q Consensus 149 i~v~D~a~~~~~~~ 162 (232)
+..+|+|++++..+
T Consensus 196 ~~~~dvA~~i~~~l 209 (236)
T 1ooe_A 196 TPLSFISEHLLKWT 209 (236)
T ss_dssp BCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 77899999998666
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.01 E-value=2.6e-09 Score=83.22 Aligned_cols=149 Identities=18% Similarity=0.177 Sum_probs=97.3
Q ss_pred CeEEEeecCCCCC-----CCCCchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD-----DPKDPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..+++|+.++.++++++... +..++|++||..+.++.+.
T Consensus 84 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 150 (270)
T 1yde_A 84 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQ------------- 150 (270)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTT-------------
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCC-------------
Confidence 7999999986421 111224678899999999999988531 2369999999755444322
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCC---CCChhHHHHHHHHhCCCCccCCccc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQP---YVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
...|+.+|...|.+.+.++.+ .|++++++|||.++++.... ........+.......+ ..
T Consensus 151 --------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p------~~ 216 (270)
T 1yde_A 151 --------AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP------LG 216 (270)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST------TS
T ss_pred --------CcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCC------CC
Confidence 148999999999999988765 58999999999998753110 00001111111111111 12
Q ss_pred CceeHHhHHHHHHHhhcC-CCCCc-eEEEecC
Q 026820 147 GAVHVKDVAKAQVLLFET-SAASG-RYLCTNG 176 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~-~~~~~-~~~~~~~ 176 (232)
.+...+|+|++++.++.. ...+| .+.++|.
T Consensus 217 r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG 248 (270)
T 1yde_A 217 RMGQPAEVGAAAVFLASEANFCTGIELLVTGG 248 (270)
T ss_dssp SCBCHHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHcccCCCcCCCEEEECCC
Confidence 367899999999998864 33456 4566653
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.01 E-value=2.3e-09 Score=83.19 Aligned_cols=136 Identities=14% Similarity=0.132 Sum_probs=87.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++. +.+..++|++||.++..+.+.
T Consensus 83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~------------- 149 (264)
T 3tfo_A 83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPT------------- 149 (264)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT-------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCC-------------
Confidence 79999999865411 122346778999999998888764 335568999999855332211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc-CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN-GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
...|+.+|...+.+.+.++.+. ++++.+++||.+..+..... ........ .......++..
T Consensus 150 --------~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~-------~~~~~~~~~~p 211 (264)
T 3tfo_A 150 --------AAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTI---THEETMAA-------MDTYRAIALQP 211 (264)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---------------------------------CCCH
T ss_pred --------ChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccc---cchhHHHH-------HHhhhccCCCH
Confidence 1489999999999999988775 89999999999875432110 00000000 00011125789
Q ss_pred HhHHHHHHHhhcCCCC
Q 026820 152 KDVAKAQVLLFETSAA 167 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~~ 167 (232)
+|+|++++.++..+..
T Consensus 212 edvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 212 ADIARAVRQVIEAPQS 227 (264)
T ss_dssp HHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHhcCCcc
Confidence 9999999999987654
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.3e-10 Score=93.02 Aligned_cols=104 Identities=14% Similarity=0.095 Sum_probs=78.7
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CC-EEEEecccceeccCCCCCCCCccC-CCC-CCCccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VR-RVVLTSSISSIVPNPNWPQGKVID-ETS-WTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~-~~i~~Ss~~~~~~~~~~~~~~~~~-E~~-~~~~~~ 76 (232)
|+|||+||..... ..++.++++.|+.+++++++++.+.+ .+ +++++|+..... .++. |.. ...|.
T Consensus 82 D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~--------~~~~~~~~~~~~p~- 150 (327)
T 1y7t_A 82 DYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN--------ALIAYKNAPGLNPR- 150 (327)
T ss_dssp SEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH--------HHHHHHTCTTSCGG-
T ss_pred CEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh--------HHHHHHHcCCCChh-
Confidence 8999999987542 34578899999999999999999985 65 788877642100 0111 222 12222
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCC
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQ 120 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~ 120 (232)
+.|+.+|..+|++...+++..|++.+++|+++|||+...
T Consensus 151 -----~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 151 -----NFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp -----GEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred -----heeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 579999999999999988888999999999999998653
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=1.7e-08 Score=79.13 Aligned_cols=151 Identities=17% Similarity=0.146 Sum_probs=98.6
Q ss_pred CeEEEeecCCCCCC-----CCCchhhhHHHHHHHHHHHHHHHHHc----C-CCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLDD-----PKDPEKELLIPAVQGTLNVLEAAKKF----G-VRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~~-----~~~~~~~~~~~nv~~~~~l~~~~~~~----~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|+|||+||...... ..+..+..+++|+.++.++++++... + ..++|++||.....+.+.
T Consensus 106 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------- 174 (286)
T 3uve_A 106 DIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPH----------- 174 (286)
T ss_dssp CEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT-----------
T ss_pred CEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCCCC-----------
Confidence 79999999865411 22234568899999999999987532 2 348999999855322111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC----------ChhHHHHHHHHhCC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV----------NASGAVLQRLLQGS 137 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~----------~~~~~~~~~~~~~~ 137 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+..+...... ..............
T Consensus 175 ----------~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (286)
T 3uve_A 175 ----------TGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMF 244 (286)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTT
T ss_pred ----------ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhh
Confidence 148999999999999988866 5899999999999876532100 00000001110000
Q ss_pred CCccCCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 138 KDTQEHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 138 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
......+.+.+|+|++++.++... ..+|. ++++|.
T Consensus 245 ----~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG 282 (286)
T 3uve_A 245 ----HTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG 282 (286)
T ss_dssp ----CSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ----hccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCc
Confidence 011146789999999999998643 35664 566653
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.00 E-value=6.5e-09 Score=80.10 Aligned_cols=137 Identities=18% Similarity=0.079 Sum_probs=93.7
Q ss_pred CeEEEeecCCCC--CCCCC---chhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL--DDPKD---PEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~--~~~~~---~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.... ..... ..+..+++|+.++.++++++ ++.+..++|++||..+..+.+.
T Consensus 94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------ 161 (252)
T 3f1l_A 94 DGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN------------ 161 (252)
T ss_dssp SEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTT------------
T ss_pred CEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCC------------
Confidence 799999998532 11122 23567899999999999987 3445579999999855332211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHcC--CcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNG--TDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+.+ +.+.++.||.+..+ +........ ....+.
T Consensus 162 ---------~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~-----------~~~~~~~~~------~~~~~~ 215 (252)
T 3f1l_A 162 ---------WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA-----------MRASAFPTE------DPQKLK 215 (252)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH-----------HHHHHCTTC------CGGGSB
T ss_pred ---------CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc-----------hhhhhCCcc------chhccC
Confidence 15899999999999999887753 78888999887432 111111111 123467
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
..+|++++++.++... ..+|. +.++|
T Consensus 216 ~p~dva~~~~~L~s~~~~~itG~~i~vdg 244 (252)
T 3f1l_A 216 TPADIMPLYLWLMGDDSRRKTGMTFDAQP 244 (252)
T ss_dssp CTGGGHHHHHHHHSGGGTTCCSCEEESSC
T ss_pred CHHHHHHHHHHHcCccccCCCCCEEEeCC
Confidence 8999999999998654 34564 56654
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=6.3e-09 Score=82.09 Aligned_cols=149 Identities=12% Similarity=0.053 Sum_probs=98.8
Q ss_pred CeEEEeecCCC--C----CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNT--L----DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~--~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||... . ....+..+..+++|+.++.++++++... .-.++|++||.+...+.+..
T Consensus 121 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~------------ 188 (297)
T 1d7o_A 121 DILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIPGY------------ 188 (297)
T ss_dssp EEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTTC------------
T ss_pred CEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccCCCCc------------
Confidence 78999998642 1 1122234678899999999999999764 11489999997543321110
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
. ..|+.+|...+.+.+.++.+ .|+++.+++||.+.++..... .....+...+....+. ..+
T Consensus 189 --~------~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~p~------~r~ 253 (297)
T 1d7o_A 189 --G------GGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI-GFIDTMIEYSYNNAPI------QKT 253 (297)
T ss_dssp --T------TTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC-SHHHHHHHHHHHHSSS------CCC
T ss_pred --c------hHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc-cccHHHHHHhhccCCC------CCC
Confidence 0 27999999999999888754 589999999999988754321 1222222222222211 135
Q ss_pred eeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
...+|+|++++.++... ..+|. +.++|.
T Consensus 254 ~~pedvA~~v~~l~s~~~~~itG~~i~vdgG 284 (297)
T 1d7o_A 254 LTADEVGNAAAFLVSPLASAITGATIYVDNG 284 (297)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 68999999999988642 34564 566654
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.00 E-value=1e-09 Score=85.13 Aligned_cols=145 Identities=19% Similarity=0.190 Sum_probs=98.1
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHHHHcC--CCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAAKKFG--VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~~~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||....... .+..+..+++|+.++.++++++...- ..++|++||.++. +. +
T Consensus 82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~----------------~ 144 (263)
T 2a4k_A 82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GA----------------F 144 (263)
T ss_dssp CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CH----------------H
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CC----------------C
Confidence 799999998654111 12235678999999999999987642 3589999997442 11 1
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
....|+.+|...+.+.+.++.+ .|+++++++||.+.++..... .......+....+ ...+.+.
T Consensus 145 -----~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~p------~~~~~~p 210 (263)
T 2a4k_A 145 -----GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL---PPWAWEQEVGASP------LGRAGRP 210 (263)
T ss_dssp -----HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS---CHHHHHHHHHTST------TCSCBCH
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc---CHHHHHHHHhcCC------CCCCcCH
Confidence 1158999999999998887765 489999999999987643221 1122222222221 1247889
Q ss_pred HhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 152 KDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 152 ~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+|+|++++.++... ..+|. +.++|.
T Consensus 211 ~dvA~~v~~l~s~~~~~~tG~~i~vdgG 238 (263)
T 2a4k_A 211 EEVAQAALFLLSEESAYITGQALYVDGG 238 (263)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 99999999998653 34564 566654
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=8.9e-09 Score=79.08 Aligned_cols=135 Identities=18% Similarity=0.120 Sum_probs=90.4
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++.. .+ .++|++||.++..+.+.
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~------------- 151 (247)
T 2jah_A 86 DILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRN------------- 151 (247)
T ss_dssp SEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTT-------------
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCC-------------
Confidence 79999999864311 1123356789999999999988753 35 69999999744222111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++++++||.+..+....... .. ........ + ..+.++
T Consensus 152 --------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~-~~~~~~~~----~-~~~~~~ 215 (247)
T 2jah_A 152 --------AAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH--TA-TKEMYEQR----I-SQIRKL 215 (247)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC--HH-HHHHHHHH----T-TTSCCB
T ss_pred --------CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc--hh-hHHHHHhc----c-cccCCC
Confidence 158999999999998888764 48999999999997754221111 11 11111110 1 112258
Q ss_pred eHHhHHHHHHHhhcCC
Q 026820 150 HVKDVAKAQVLLFETS 165 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~ 165 (232)
..+|+|++++.++..+
T Consensus 216 ~pedvA~~v~~l~s~~ 231 (247)
T 2jah_A 216 QAQDIAEAVRYAVTAP 231 (247)
T ss_dssp CHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHhCCC
Confidence 9999999999998754
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=98.99 E-value=7.2e-10 Score=87.76 Aligned_cols=137 Identities=18% Similarity=0.098 Sum_probs=89.0
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||..... ...+.....+++|+.++.++++++.. .+ ..++|++||.++..+.+.
T Consensus 110 d~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 177 (301)
T 3tjr_A 110 DVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAG------------ 177 (301)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT------------
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCC------------
Confidence 7999999986541 12233467889999999999998643 23 458999999855332211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHH-----HHhCCCCc-cC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQR-----LLQGSKDT-QE 142 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~-----~~~~~~~~-~~ 142 (232)
...|+.||...|.+.+.++.+. |+++++++||.+..+. ....... .....+.. ++
T Consensus 178 ---------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~-------~~~~~~~~~~~~~~~~~~~~~~~ 241 (301)
T 3tjr_A 178 ---------LGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL-------VSNSERIRGADYGMSATPEGAFG 241 (301)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH-------HHHHHHHC---------------
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc-------ccccccccchhhccccChhhhcc
Confidence 1589999999999998887653 8999999999986532 1110000 00001111 11
Q ss_pred C--cccCceeHHhHHHHHHHhhcCC
Q 026820 143 H--YWLGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 143 ~--~~~~~i~v~D~a~~~~~~~~~~ 165 (232)
. ....+++++|+|++++.++..+
T Consensus 242 ~~~~~~~~~~pedvA~~i~~~l~~~ 266 (301)
T 3tjr_A 242 PLPTQDESVSADDVARLTADAILAN 266 (301)
T ss_dssp -------CCCHHHHHHHHHHHHHHT
T ss_pred ccccccCCCCHHHHHHHHHHHHhcC
Confidence 1 2346899999999999999765
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.8e-09 Score=83.29 Aligned_cols=136 Identities=11% Similarity=-0.010 Sum_probs=83.2
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||..... ...+..+..+++|+.++.++++++. +.+..++|++||.++..+.+.
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------- 151 (252)
T 3h7a_A 85 EVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSG------------- 151 (252)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTT-------------
T ss_pred eEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCC-------------
Confidence 7899999986541 1122346778999999999988863 345468999999855333211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcE-EEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDV-VAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~-~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+. |+.+ .++.||.+..+..... ........... .... +
T Consensus 152 --------~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~---~~~~~~~~~~~------~~~~-~ 213 (252)
T 3h7a_A 152 --------FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER---REQMFGKDALA------NPDL-L 213 (252)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------------
T ss_pred --------CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc---chhhhhhhhhc------CCcc-C
Confidence 1589999999999999887653 7888 7899998865432211 01111111000 1122 8
Q ss_pred eeHHhHHHHHHHhhcCCCC
Q 026820 149 VHVKDVAKAQVLLFETSAA 167 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~ 167 (232)
...+|+|++++.++..+..
T Consensus 214 ~~pedvA~~~~~l~s~~~~ 232 (252)
T 3h7a_A 214 MPPAAVAGAYWQLYQQPKS 232 (252)
T ss_dssp CCHHHHHHHHHHHHHCCGG
T ss_pred CCHHHHHHHHHHHHhCchh
Confidence 8999999999999976543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=98.99 E-value=3.8e-09 Score=80.22 Aligned_cols=128 Identities=15% Similarity=0.056 Sum_probs=86.0
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||...... ..+.....+++|+.++.++++++... .-.++|++||..+..+.+.
T Consensus 74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------- 139 (230)
T 3guy_A 74 STVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQ-------------- 139 (230)
T ss_dssp SEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTT--------------
T ss_pred CEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCC--------------
Confidence 78999999865411 12233567899999999999987653 1128999999754322111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
...|+.+|...+.+.+.++.+. |+++.+++||.+..+.... ..... ....+++
T Consensus 140 -------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-----------~~~~~------~~~~~~~ 195 (230)
T 3guy_A 140 -------ESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET-----------SGKSL------DTSSFMS 195 (230)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC---------------------------------CCC
T ss_pred -------CchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh-----------cCCCC------CcccCCC
Confidence 1589999999999999988764 8999999999886542111 00000 1235788
Q ss_pred HHhHHHHHHHhhcCCC
Q 026820 151 VKDVAKAQVLLFETSA 166 (232)
Q Consensus 151 v~D~a~~~~~~~~~~~ 166 (232)
++|+|++++.++..+.
T Consensus 196 ~~dvA~~i~~l~~~~~ 211 (230)
T 3guy_A 196 AEDAALMIHGALANIG 211 (230)
T ss_dssp HHHHHHHHHHHCCEET
T ss_pred HHHHHHHHHHHHhCcC
Confidence 9999999999886553
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=98.98 E-value=9.4e-09 Score=80.75 Aligned_cols=144 Identities=15% Similarity=0.038 Sum_probs=96.0
Q ss_pred CeEEEeecCCCCCCC------C-----C---chhhhHHHHHHHHHHHHHHHHHc----C------CCEEEEecccceecc
Q 026820 1 MGVFHLASPNTLDDP------K-----D---PEKELLIPAVQGTLNVLEAAKKF----G------VRRVVLTSSISSIVP 56 (232)
Q Consensus 1 D~Vih~a~~~~~~~~------~-----~---~~~~~~~~nv~~~~~l~~~~~~~----~------~~~~i~~Ss~~~~~~ 56 (232)
|+|||+||....... . . .....+++|+.++.++++++... + ..++|++||.++..+
T Consensus 108 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 187 (288)
T 2x9g_A 108 DVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP 187 (288)
T ss_dssp CEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTTSC
T ss_pred CEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCC
Confidence 799999998654211 1 1 23467889999999999887643 2 358999999744221
Q ss_pred CCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHH
Q 026820 57 NPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRL 133 (232)
Q Consensus 57 ~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~ 133 (232)
.+ . ...|+.+|...+.+.+.++.+. |+++++++||.+.++. . . . ......+
T Consensus 188 ~~---------------~------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~-~--~~~~~~~ 241 (288)
T 2x9g_A 188 CM---------------A------FSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M-G--EEEKDKW 241 (288)
T ss_dssp CT---------------T------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S-C--HHHHHHH
T ss_pred CC---------------C------CchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c-C--hHHHHHH
Confidence 11 1 1589999999999998887653 8999999999999875 2 1 1 1222333
Q ss_pred HhCCCCccCCcccCc-eeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 134 LQGSKDTQEHYWLGA-VHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 134 ~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
....+. ..+ ...+|+|++++.++... ..+|. +.++|.
T Consensus 242 ~~~~p~------~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG 282 (288)
T 2x9g_A 242 RRKVPL------GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG 282 (288)
T ss_dssp HHTCTT------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HhhCCC------CCCCCCHHHHHHHHHHHhCccccCccCCEEEECcc
Confidence 322211 124 68999999999998653 34564 456543
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.2e-09 Score=85.39 Aligned_cols=149 Identities=14% Similarity=0.057 Sum_probs=95.1
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..+..+..+++|+.++.++++++. +.+..++|++||.....+..
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~-------------- 176 (275)
T 4imr_A 111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKS-------------- 176 (275)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC--------------
Confidence 79999999865411 122345678999999999999873 34556899999974422110
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
+ ...|+.||...+.+.+.++.+. |+++.+++||.+..+...............+..... ...-+.
T Consensus 177 -~------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-----p~~r~~ 244 (275)
T 4imr_A 177 -V------VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLN-----WMGRAG 244 (275)
T ss_dssp -T------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHS-----TTCSCB
T ss_pred -C------chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcC-----ccCCCc
Confidence 1 1479999999999999888764 899999999999654211000000111111111110 011366
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
..+|+|++++.++... ..+|. +.++|
T Consensus 245 ~pedvA~~v~fL~s~~a~~itG~~i~vdG 273 (275)
T 4imr_A 245 RPEEMVGAALFLASEACSFMTGETIFLTG 273 (275)
T ss_dssp CGGGGHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred CHHHHHHHHHHHcCcccCCCCCCEEEeCC
Confidence 7999999999998653 34564 56654
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.97 E-value=1.2e-09 Score=85.14 Aligned_cols=126 Identities=14% Similarity=-0.003 Sum_probs=89.1
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||........ +.....+++|+.++.++++++. +.+..++|++||.++..+.
T Consensus 110 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------- 174 (272)
T 1yb1_A 110 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV--------------- 174 (272)
T ss_dssp SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH---------------
T ss_pred cEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC---------------
Confidence 7999999986541111 1235778999999888777764 4566799999997442210
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc------CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN------GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
+ ....|+.+|...|.+++.++.+. +++++++|||.+.++.... .. . ...
T Consensus 175 -~-----~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~---~~----~------------~~~ 229 (272)
T 1yb1_A 175 -P-----FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN---PS----T------------SLG 229 (272)
T ss_dssp -H-----HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC---TH----H------------HHC
T ss_pred -C-----CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc---cc----c------------ccc
Confidence 1 12589999999999999887653 8999999999997764221 00 0 012
Q ss_pred CceeHHhHHHHHHHhhcCCC
Q 026820 147 GAVHVKDVAKAQVLLFETSA 166 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~~ 166 (232)
.+++.+|+|++++.++..+.
T Consensus 230 ~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 230 PTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp CCCCHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHcCC
Confidence 57899999999999997653
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.97 E-value=4.5e-09 Score=80.56 Aligned_cols=148 Identities=14% Similarity=0.066 Sum_probs=95.4
Q ss_pred CeEEEeecCCCC---CC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTL---DD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~---~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|+|||+||.... .. ..+..+..+++|+.++.++++++. +.+..++|++||..+..+.+.
T Consensus 74 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~---------- 143 (244)
T 1zmo_A 74 DTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAY---------- 143 (244)
T ss_dssp EEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTT----------
T ss_pred CEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCC----------
Confidence 789999997543 11 112345688999999999998875 445569999999754322111
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhH--HHHHHHHh-CCCCccCC
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASG--AVLQRLLQ-GSKDTQEH 143 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~--~~~~~~~~-~~~~~~~~ 143 (232)
...|+.+|...+.+.+.++.+ .|+++++++||.+-.+.... ..... .....+.. ..+
T Consensus 144 -----------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~p----- 206 (244)
T 1zmo_A 144 -----------NPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFP-TSDWENNPELRERVDRDVP----- 206 (244)
T ss_dssp -----------CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBC-HHHHHHCHHHHHHHHHHCT-----
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc-cccccchHHHHHHHhcCCC-----
Confidence 147999999999999988765 48999999999986543200 00000 11122211 111
Q ss_pred cccCceeHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 144 YWLGAVHVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
...+...+|+|++++.++.... .+|. +.++|.
T Consensus 207 -~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG 241 (244)
T 1zmo_A 207 -LGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG 241 (244)
T ss_dssp -TCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred -CCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence 1136789999999999986532 3464 455543
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=98.97 E-value=5.5e-09 Score=83.62 Aligned_cols=150 Identities=22% Similarity=0.204 Sum_probs=93.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++ ++.+..++|++||.+...+.+.
T Consensus 85 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~------------- 151 (327)
T 1jtv_A 85 DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF------------- 151 (327)
T ss_dssp SEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT-------------
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCC-------------
Confidence 79999999764311 12234678899999999999986 3446679999999855332111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhH-----------HHHHHHHhCCC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASG-----------AVLQRLLQGSK 138 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~-----------~~~~~~~~~~~ 138 (232)
...|+.||...|.+.+.++.+ .|+++++++||.|..+.......... ..+..+.....
T Consensus 152 --------~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (327)
T 1jtv_A 152 --------NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSK 223 (327)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred --------ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHH
Confidence 148999999999999988764 58999999999997654221100000 00000000000
Q ss_pred CccCCcccCceeHHhHHHHHHHhhcCCCCCceEEEe
Q 026820 139 DTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCT 174 (232)
Q Consensus 139 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~ 174 (232)
. ...+-....+|+|++++.++..+.....|..+
T Consensus 224 ~---~~~~~~~~pedvA~~i~~l~~~~~~~~~~~tg 256 (327)
T 1jtv_A 224 Q---VFREAAQNPEEVAEVFLTALRAPKPTLRYFTT 256 (327)
T ss_dssp H---HHHHHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred H---hhhhcCCCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 0 00011257999999999999776554556433
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.96 E-value=5.2e-09 Score=81.96 Aligned_cols=138 Identities=14% Similarity=0.119 Sum_probs=91.5
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHHH----cC--CCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAKK----FG--VRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|+|||+||.... ....+..+..+++|+.++.++++++.. .+ ..++|++||.++..+.+.
T Consensus 113 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~---------- 182 (281)
T 4dry_A 113 DLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPN---------- 182 (281)
T ss_dssp SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTT----------
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCC----------
Confidence 799999998543 112233456889999998888877653 22 358999999855322111
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCC-cc
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEH-YW 145 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 145 (232)
...|+.+|...+.+.+.++.+ .|+.+.+++||.+..+... .+.......... ..
T Consensus 183 -----------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~-----------~~~~~~~~~~~~~~~ 240 (281)
T 4dry_A 183 -----------SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA-----------RMSTGVLQANGEVAA 240 (281)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC------------------CEEECTTSCEEE
T ss_pred -----------ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh-----------hhcchhhhhhhcccc
Confidence 158999999999999988765 4899999999998654211 111100000111 12
Q ss_pred cCceeHHhHHHHHHHhhcCCCCCce
Q 026820 146 LGAVHVKDVAKAQVLLFETSAASGR 170 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~~~~~~~ 170 (232)
..++..+|+|++++.++..+...+.
T Consensus 241 ~~~~~pedvA~~v~fL~s~~~~~~i 265 (281)
T 4dry_A 241 EPTIPIEHIAEAVVYMASLPLSANV 265 (281)
T ss_dssp CCCBCHHHHHHHHHHHHHSCTTEEE
T ss_pred cCCCCHHHHHHHHHHHhCCCccCcc
Confidence 3478899999999999988765543
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.96 E-value=4.7e-09 Score=82.14 Aligned_cols=146 Identities=16% Similarity=0.059 Sum_probs=97.6
Q ss_pred CeEEEe-ecCCCCCCC------CC---chhhhHHHHHHHHHHHHHHHHHc----------CCCEEEEecccceeccCCCC
Q 026820 1 MGVFHL-ASPNTLDDP------KD---PEKELLIPAVQGTLNVLEAAKKF----------GVRRVVLTSSISSIVPNPNW 60 (232)
Q Consensus 1 D~Vih~-a~~~~~~~~------~~---~~~~~~~~nv~~~~~l~~~~~~~----------~~~~~i~~Ss~~~~~~~~~~ 60 (232)
|+|||+ |+....... .. .....+++|+.++.++++++... +-.++|++||..+..+.+.
T Consensus 105 d~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~- 183 (281)
T 3ppi_A 105 RYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIG- 183 (281)
T ss_dssp EEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTT-
T ss_pred CeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCC-
Confidence 689999 554332111 11 24678899999999999987532 2348999999855322111
Q ss_pred CCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCC
Q 026820 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGS 137 (232)
Q Consensus 61 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 137 (232)
...|+.+|...+.+.+.++.+. |+.+.+++||.+..+.... ........+....
T Consensus 184 --------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~~ 240 (281)
T 3ppi_A 184 --------------------QTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES---VGEEALAKFAANI 240 (281)
T ss_dssp --------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---TCHHHHHHHHHTC
T ss_pred --------------------CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc---ccHHHHHHHHhcC
Confidence 1589999999999988887653 8999999999996542111 1122233333332
Q ss_pred CCccCCcccCceeHHhHHHHHHHhhcCCCCCce-EEEec
Q 026820 138 KDTQEHYWLGAVHVKDVAKAQVLLFETSAASGR-YLCTN 175 (232)
Q Consensus 138 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~ 175 (232)
+. ...+.+++|+|++++.++.....+|. ++++|
T Consensus 241 ~~-----~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdG 274 (281)
T 3ppi_A 241 PF-----PKRLGTPDEFADAAAFLLTNGYINGEVMRLDG 274 (281)
T ss_dssp CS-----SSSCBCHHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred CC-----CCCCCCHHHHHHHHHHHHcCCCcCCcEEEECC
Confidence 21 13578999999999999987777774 56664
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=8.3e-09 Score=78.53 Aligned_cols=129 Identities=16% Similarity=0.066 Sum_probs=89.8
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||...... ..+.....+++|+.++.++++++... +..++|++||....++.+.
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~-------------- 147 (235)
T 3l77_A 82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPY-------------- 147 (235)
T ss_dssp SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTT--------------
T ss_pred CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCC--------------
Confidence 79999999875522 22334678899999999999997542 2246777777644332211
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH-cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHH
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK-NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVK 152 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 152 (232)
...|+.+|...+.+.+.+..+ .++++.+++||.+-.+...... . ......++..+
T Consensus 148 -------~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~------------~-----~~~~~~~~~p~ 203 (235)
T 3l77_A 148 -------GGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKP------------G-----KPKEKGYLKPD 203 (235)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCS------------C-----CCGGGTCBCHH
T ss_pred -------cchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccC------------C-----cccccCCCCHH
Confidence 148999999999999987544 3899999999998654321100 0 00122578899
Q ss_pred hHHHHHHHhhcCCCC
Q 026820 153 DVAKAQVLLFETSAA 167 (232)
Q Consensus 153 D~a~~~~~~~~~~~~ 167 (232)
|+|++++.++..+..
T Consensus 204 dva~~v~~l~~~~~~ 218 (235)
T 3l77_A 204 EIAEAVRCLLKLPKD 218 (235)
T ss_dssp HHHHHHHHHHTSCTT
T ss_pred HHHHHHHHHHcCCCC
Confidence 999999999987654
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.95 E-value=4.6e-09 Score=80.10 Aligned_cols=127 Identities=15% Similarity=0.084 Sum_probs=87.3
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..+++|+.++.++++++.. .+ .++|++||.++.++.+.
T Consensus 79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~------------- 144 (235)
T 3l6e_A 79 ELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKAN------------- 144 (235)
T ss_dssp SEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSS-------------
T ss_pred cEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCC-------------
Confidence 7999999986541 12233467889999999999988743 23 28999999755332211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.||...+.+.+.++.+ .|+.+.+++||.+-.+..... .. . ....++
T Consensus 145 --------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--------~~----~------~~~~~~ 198 (235)
T 3l6e_A 145 --------ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT--------DH----V------DPSGFM 198 (235)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----------------------------CB
T ss_pred --------CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc--------CC----C------CCcCCC
Confidence 158999999999999998875 379999999998865421110 00 0 011478
Q ss_pred eHHhHHHHHHHhhcCCCC
Q 026820 150 HVKDVAKAQVLLFETSAA 167 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~~ 167 (232)
..+|+|++++.++..+..
T Consensus 199 ~pedvA~~v~~l~~~~~~ 216 (235)
T 3l6e_A 199 TPEDAAAYMLDALEARSS 216 (235)
T ss_dssp CHHHHHHHHHHHTCCCSS
T ss_pred CHHHHHHHHHHHHhCCCC
Confidence 899999999999976543
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=98.95 E-value=7.5e-09 Score=86.36 Aligned_cols=146 Identities=14% Similarity=0.030 Sum_probs=96.0
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||..... ...+..+..+++|+.++.++.+++... +..+||++||.+.+.+....
T Consensus 290 d~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~------------ 357 (454)
T 3u0b_A 290 DILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQ------------ 357 (454)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTC------------
T ss_pred eEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCC------------
Confidence 7899999987541 112233577899999999999998765 45699999998665554321
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
..|+.+|...+.+.+.++.+ .|++++++.||.+..+.... ............ .....+.
T Consensus 358 ---------~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~~~~-----~~l~r~g 419 (454)
T 3u0b_A 358 ---------TNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEA----IPLATREVGRRL-----NSLFQGG 419 (454)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--------------CHHHHHS-----BTTSSCB
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh----cchhhHHHHHhh-----ccccCCC
Confidence 58999999888888887754 48999999999997653221 000000111100 0112356
Q ss_pred eHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
..+|+++++.+++... ..+|. +.++|.
T Consensus 420 ~pedvA~~v~fL~s~~a~~itG~~i~vdGG 449 (454)
T 3u0b_A 420 QPVDVAELIAYFASPASNAVTGNTIRVCGQ 449 (454)
T ss_dssp CHHHHHHHHHHHHCGGGTTCCSCEEEESSS
T ss_pred CHHHHHHHHHHHhCCccCCCCCcEEEECCc
Confidence 7999999999988643 34564 566553
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=2.3e-09 Score=90.29 Aligned_cols=152 Identities=14% Similarity=0.051 Sum_probs=102.8
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~ 76 (232)
|+|||+||..... ...+.....+++|+.++.+|.+++.+.+.++||++||.+.+++....
T Consensus 308 d~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~---------------- 371 (486)
T 2fr1_A 308 SAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGL---------------- 371 (486)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTC----------------
T ss_pred cEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCC----------------
Confidence 6899999986541 11223356778899999999999988888899999998776664331
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHH
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAK 156 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 156 (232)
..|+.+|...+.+...+. ..|+++++++||.+.+.+.... ..... +....+.+++.+|+++
T Consensus 372 -----~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~~------~~~~~-------~~~~g~~~i~~e~~a~ 432 (486)
T 2fr1_A 372 -----GGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEG------PVADR-------FRRHGVIEMPPETACR 432 (486)
T ss_dssp -----TTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC-------------------------CTTTTEECBCHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccch------hHHHH-------HHhcCCCCCCHHHHHH
Confidence 479999999998877654 5699999999999876532110 00000 1112346789999999
Q ss_pred HHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhC
Q 026820 157 AQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~ 191 (232)
++..++..... .+.+. .++|..+...+....
T Consensus 433 ~l~~~l~~~~~--~~~v~--~~d~~~~~~~~~~~~ 463 (486)
T 2fr1_A 433 ALQNALDRAEV--CPIVI--DVRWDRFLLAYTAQR 463 (486)
T ss_dssp HHHHHHHTTCS--SCEEC--EECHHHHHHHHTSSS
T ss_pred HHHHHHhCCCC--eEEEE--eCCHHHHhhhhcccC
Confidence 99999976543 22222 256777776655443
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.91 E-value=6.8e-09 Score=79.88 Aligned_cols=128 Identities=10% Similarity=-0.034 Sum_probs=87.4
Q ss_pred CeEEEeecCCCCCCCCC---chhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDPKD---PEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~---~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||......... ..+..+++|+.++.++++++. +.+..++|++||.++.++...
T Consensus 89 D~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 154 (250)
T 3nyw_A 89 DILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFAD-------------- 154 (250)
T ss_dssp EEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CC--------------
T ss_pred CEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCC--------------
Confidence 78999999865422222 235778999999999998873 345568999999855432211
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
...|+.+|...+.+.+.++.+. |+++.+++||.+..+ +..... .. . ....++.
T Consensus 155 -------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~-----------~~~~~~--~~--~--~~~~~~~ 210 (250)
T 3nyw_A 155 -------GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD-----------MAKKAG--TP--F--KDEEMIQ 210 (250)
T ss_dssp -------TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH-----------HHHHTT--CC--S--CGGGSBC
T ss_pred -------CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc-----------hhhhcC--CC--c--ccccCCC
Confidence 1489999999999999887663 899999999988532 111111 10 1 1234789
Q ss_pred HHhHHHHHHHhhcCCC
Q 026820 151 VKDVAKAQVLLFETSA 166 (232)
Q Consensus 151 v~D~a~~~~~~~~~~~ 166 (232)
.+|++++++.++..+.
T Consensus 211 p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 211 PDDLLNTIRCLLNLSE 226 (250)
T ss_dssp HHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHcCCC
Confidence 9999999999997654
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=98.91 E-value=8.6e-09 Score=87.18 Aligned_cols=152 Identities=15% Similarity=0.057 Sum_probs=104.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc-CCCEEEEecccceeccCCCCCCCCccCCCCCCCcc
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLD 75 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~ 75 (232)
|+|||+||...... ..+.....+++|+.++.+|.+++... +.++||++||.+.+++...
T Consensus 337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g---------------- 400 (511)
T 2z5l_A 337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG---------------- 400 (511)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT----------------
T ss_pred cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC----------------
Confidence 78999999876411 11223567789999999999998876 7789999999866665432
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHH
Q 026820 76 FCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVA 155 (232)
Q Consensus 76 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 155 (232)
+..|+.+|...|.+...+ +..|+++++++||.+-+.+... .... ..+.. .....++.+|++
T Consensus 401 -----~~~YaaaKa~ld~la~~~-~~~gi~v~sv~pG~~~~tgm~~--~~~~---~~~~~--------~g~~~l~~e~~a 461 (511)
T 2z5l_A 401 -----QGAYAAANAALDALAERR-RAAGLPATSVAWGLWGGGGMAA--GAGE---ESLSR--------RGLRAMDPDAAV 461 (511)
T ss_dssp -----BHHHHHHHHHHHHHHHHH-HTTTCCCEEEEECCBCSTTCCC--CHHH---HHHHH--------HTBCCBCHHHHH
T ss_pred -----CHHHHHHHHHHHHHHHHH-HHcCCcEEEEECCcccCCcccc--cccH---HHHHh--------cCCCCCCHHHHH
Confidence 158999999999998875 4569999999999884332221 1111 11111 123578999999
Q ss_pred HHHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhC
Q 026820 156 KAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~ 191 (232)
+++..++..+.. ...+. .+.|..+...+....
T Consensus 462 ~~l~~al~~~~~--~v~v~--~~d~~~~~~~~~~~~ 493 (511)
T 2z5l_A 462 DALLGAMGRNDV--CVTVV--DVDWERFAPATNAIR 493 (511)
T ss_dssp HHHHHHHHHTCS--EEEEC--CBCHHHHHHHHHHHS
T ss_pred HHHHHHHhCCCC--EEEEE--eCCHHHHHhhhcccC
Confidence 999999976532 22222 356777777665544
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=7.5e-09 Score=82.53 Aligned_cols=125 Identities=20% Similarity=0.117 Sum_probs=88.4
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||...... ..+..+..+++|+.++.++++++. +.+..++|++||.+..++...
T Consensus 94 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~------------- 160 (319)
T 1gz6_A 94 DVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG------------- 160 (319)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC-------------
Confidence 79999999865411 122346788999999999988873 345579999999866555322
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+.+.+++||.+ .+... ... +.....++
T Consensus 161 --------~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~---~~~---------------~~~~~~~~ 213 (319)
T 1gz6_A 161 --------QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE---TVM---------------PEDLVEAL 213 (319)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG---GGS---------------CHHHHHHS
T ss_pred --------CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc---ccC---------------ChhhhccC
Confidence 148999999999999988765 4899999999976 22110 000 00111356
Q ss_pred eHHhHHHHHHHhhcCC
Q 026820 150 HVKDVAKAQVLLFETS 165 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~ 165 (232)
..+|+|.+++.++..+
T Consensus 214 ~p~dvA~~~~~l~s~~ 229 (319)
T 1gz6_A 214 KPEYVAPLVLWLCHES 229 (319)
T ss_dssp CGGGTHHHHHHHTSTT
T ss_pred CHHHHHHHHHHHhCch
Confidence 7899999999988653
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.88 E-value=9.1e-09 Score=79.72 Aligned_cols=148 Identities=20% Similarity=0.178 Sum_probs=93.5
Q ss_pred CeEEEeecCC-CC----CCCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPN-TL----DDPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~-~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||.. .. ....+..+..+++|+.++.++++++.. .+..++|++||..+.++.+.
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------------ 153 (262)
T 1zem_A 86 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN------------ 153 (262)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT------------
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCC------------
Confidence 7999999976 22 111223467789999999999988754 35569999999755332211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCC------------CChhHH-HHHHHHh
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPY------------VNASGA-VLQRLLQ 135 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~------------~~~~~~-~~~~~~~ 135 (232)
...|+.+|...+.+.+.++.+ .|+++++++||.+..+..... ...... ....+..
T Consensus 154 ---------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (262)
T 1zem_A 154 ---------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG 224 (262)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHH
T ss_pred ---------CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHh
Confidence 148999999999998887754 489999999998854321000 000001 1111111
Q ss_pred CCCCccCCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 136 GSKDTQEHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 136 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
..+ ...+...+|+|++++.++... ..+|. +.++|
T Consensus 225 ~~p------~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG 261 (262)
T 1zem_A 225 SVP------MRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG 261 (262)
T ss_dssp TST------TSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred cCC------CCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCC
Confidence 111 123678999999999988643 34554 44443
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.87 E-value=1.6e-08 Score=77.47 Aligned_cols=126 Identities=17% Similarity=0.114 Sum_probs=87.6
Q ss_pred CeEEEeecCCCCC-----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD-----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~-----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||..... ...+.....+++|+.++.++++++. +.+..++|++||.....+.+.
T Consensus 96 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------ 163 (247)
T 3i1j_A 96 DGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRAN------------ 163 (247)
T ss_dssp SEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTT------------
T ss_pred CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCC------------
Confidence 7999999985431 1123346778999999999999984 445568999999754322111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...|.+.+.++.+ .++++.++.||.+-.+ +........ ....
T Consensus 164 ---------~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~-----------~~~~~~~~~------~~~~ 217 (247)
T 3i1j_A 164 ---------WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG-----------MRAQAYPDE------NPLN 217 (247)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH-----------HHHHHSTTS------CGGG
T ss_pred ---------cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc-----------cchhccccc------CccC
Confidence 158999999999999988865 3788999999887432 111111111 1224
Q ss_pred ceeHHhHHHHHHHhhcC
Q 026820 148 AVHVKDVAKAQVLLFET 164 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~ 164 (232)
+...+|++++++.++..
T Consensus 218 ~~~p~dva~~~~~l~s~ 234 (247)
T 3i1j_A 218 NPAPEDIMPVYLYLMGP 234 (247)
T ss_dssp SCCGGGGTHHHHHHHSG
T ss_pred CCCHHHHHHHHHHHhCc
Confidence 56799999999999864
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.87 E-value=1.2e-07 Score=74.41 Aligned_cols=136 Identities=19% Similarity=0.134 Sum_probs=92.5
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHHHHHHHHHHc----CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTLNVLEAAKKF----GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~~~----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||........ +..+..+++|+.++.++++++... +..++|++||.....+...
T Consensus 95 d~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~------------- 161 (285)
T 3sc4_A 95 DICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWL------------- 161 (285)
T ss_dssp SEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGS-------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCC-------------
Confidence 7999999987542211 223566789999999999988654 4569999999744322100
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
....|+.||...+.+.+.++.+ .|+++.+++||.+... . +......... ....+.
T Consensus 162 -------~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t-------~---~~~~~~~~~~-----~~~r~~ 219 (285)
T 3sc4_A 162 -------RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT-------A---AVQNLLGGDE-----AMARSR 219 (285)
T ss_dssp -------CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC-------H---HHHHHHTSCC-----CCTTCB
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc-------H---HHHhhccccc-----cccCCC
Confidence 0158999999999999998876 4899999999854321 1 1222222211 122467
Q ss_pred eHHhHHHHHHHhhcCCC-CCceE
Q 026820 150 HVKDVAKAQVLLFETSA-ASGRY 171 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~-~~~~~ 171 (232)
..+|+|++++.++.... .+|..
T Consensus 220 ~pedvA~~~~~l~s~~~~~tG~~ 242 (285)
T 3sc4_A 220 KPEVYADAAYVVLNKPSSYTGNT 242 (285)
T ss_dssp CTHHHHHHHHHHHTSCTTCCSCE
T ss_pred CHHHHHHHHHHHhCCcccccceE
Confidence 89999999999997653 44544
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=98.87 E-value=1.4e-08 Score=79.59 Aligned_cols=127 Identities=12% Similarity=-0.000 Sum_probs=86.6
Q ss_pred CeEEEe-ecCCCCCCCC---CchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHL-ASPNTLDDPK---DPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~-a~~~~~~~~~---~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+ ||........ ......+++|+.++.++++++... +..++|++||.++..+.+
T Consensus 108 D~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------- 172 (286)
T 1xu9_A 108 DMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYP--------------- 172 (286)
T ss_dssp SEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCT---------------
T ss_pred CEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCC---------------
Confidence 789999 5665431111 223567899999999999887542 235999999974422111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc-----CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN-----GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
+ ...|+.+|...|.+.+.++.+. ++++++++||.+..+. . .....+ .....+
T Consensus 173 ~------~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~-------~----~~~~~~------~~~~~~ 229 (286)
T 1xu9_A 173 M------VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-------A----MKAVSG------IVHMQA 229 (286)
T ss_dssp T------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH-------H----HHHSCG------GGGGGC
T ss_pred C------ccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh-------H----HHhccc------cccCCC
Confidence 1 1589999999999988877543 8999999999885321 1 111111 112357
Q ss_pred eeHHhHHHHHHHhhcCC
Q 026820 149 VHVKDVAKAQVLLFETS 165 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~ 165 (232)
++.+|+|+.++.++..+
T Consensus 230 ~~~~~vA~~i~~~~~~~ 246 (286)
T 1xu9_A 230 APKEECALEIIKGGALR 246 (286)
T ss_dssp BCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcC
Confidence 89999999999988765
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=98.86 E-value=4e-09 Score=81.77 Aligned_cols=149 Identities=10% Similarity=-0.049 Sum_probs=92.3
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|++||+||...... ..+..+..+++|+.++.++++++... +..++|++||.....+.+.
T Consensus 93 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~--------------- 157 (262)
T 3ksu_A 93 DIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGF--------------- 157 (262)
T ss_dssp EEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCC---------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCC---------------
Confidence 78999999865411 12233567789999999999999764 3358999999755433221
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
...|+.+|...+.+.+.++.+. |+++.++.||.+..+...... ........... .....+...
T Consensus 158 ------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~------~~~~r~~~p 223 (262)
T 3ksu_A 158 ------YSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE--TKESTAFHKSQ------AMGNQLTKI 223 (262)
T ss_dssp ------CCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC--------------------CCCCSCCG
T ss_pred ------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC--chHHHHHHHhc------CcccCCCCH
Confidence 1379999999999999988764 899999999988543211000 00000000000 012246789
Q ss_pred HhHHHHHHHhhcC-CCCCce-EEEecCcc
Q 026820 152 KDVAKAQVLLFET-SAASGR-YLCTNGIY 178 (232)
Q Consensus 152 ~D~a~~~~~~~~~-~~~~~~-~~~~~~~~ 178 (232)
+|+|++++.++.. ...+|. +.++|...
T Consensus 224 edvA~~v~~L~s~~~~itG~~i~vdGg~~ 252 (262)
T 3ksu_A 224 EDIAPIIKFLTTDGWWINGQTIFANGGYT 252 (262)
T ss_dssp GGTHHHHHHHHTTTTTCCSCEEEESTTCC
T ss_pred HHHHHHHHHHcCCCCCccCCEEEECCCcc
Confidence 9999999999875 224564 57776543
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=2.4e-08 Score=76.30 Aligned_cols=137 Identities=14% Similarity=0.101 Sum_probs=92.1
Q ss_pred CeEEEeecCCCCCCC--C---CchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDP--K---DPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~--~---~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+|||+||....... . +..+..+++|+.++.++++++... .-.++|++||.++..+.+.
T Consensus 78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------------- 143 (241)
T 1dhr_A 78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG-------------- 143 (241)
T ss_dssp EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT--------------
T ss_pred CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCC--------------
Confidence 789999998653111 1 223567889999999999998764 1248999999754322111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK-----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...|.+.+.++.+ .|+++++++||.+-.+ . ....... .....+
T Consensus 144 -------~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~--------~---~~~~~~~------~~~~~~ 199 (241)
T 1dhr_A 144 -------MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP--------M---NRKSMPE------ADFSSW 199 (241)
T ss_dssp -------BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH--------H---HHHHSTT------SCGGGS
T ss_pred -------chHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc--------c---ccccCcc------hhhccC
Confidence 158999999999999988765 3699999999988532 1 1111111 112246
Q ss_pred eeHHhHHHHHHHhhcCCC--CCce-EEEec
Q 026820 149 VHVKDVAKAQVLLFETSA--ASGR-YLCTN 175 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~--~~~~-~~~~~ 175 (232)
+..+|+|++++.++.... .+|. +.+.|
T Consensus 200 ~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g 229 (241)
T 1dhr_A 200 TPLEFLVETFHDWITGNKRPNSGSLIQVVT 229 (241)
T ss_dssp EEHHHHHHHHHHHHTTTTCCCTTCEEEEEE
T ss_pred CCHHHHHHHHHHHhcCCCcCccceEEEEeC
Confidence 788999999999886533 3454 44543
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=1.3e-07 Score=74.36 Aligned_cols=145 Identities=13% Similarity=0.010 Sum_probs=95.9
Q ss_pred CeEEEeecCCCCCCC------------------CCchhhhHHHHHHHHHHHHHHHHH----cC------CCEEEEecccc
Q 026820 1 MGVFHLASPNTLDDP------------------KDPEKELLIPAVQGTLNVLEAAKK----FG------VRRVVLTSSIS 52 (232)
Q Consensus 1 D~Vih~a~~~~~~~~------------------~~~~~~~~~~nv~~~~~l~~~~~~----~~------~~~~i~~Ss~~ 52 (232)
|++||+||....... .+.....+++|+.++.++++++.. .+ ..++|++||..
T Consensus 107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~ 186 (291)
T 1e7w_A 107 DVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 186 (291)
T ss_dssp CEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTT
T ss_pred CEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechh
Confidence 799999998654111 122356789999999999988753 34 46899999974
Q ss_pred eeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHH
Q 026820 53 SIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAV 129 (232)
Q Consensus 53 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 129 (232)
...+.+ . ...|+.+|...+.+.+.++.+ .|+.+.+++||.+..+. . .. ...
T Consensus 187 ~~~~~~---------------~------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~~--~~~ 240 (291)
T 1e7w_A 187 TNQPLL---------------G------YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--MP--PAV 240 (291)
T ss_dssp TTSCCT---------------T------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--SC--HHH
T ss_pred hcCCCC---------------C------CchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--CC--HHH
Confidence 422111 1 158999999999999888765 48999999999986543 1 11 222
Q ss_pred HHHHHhCCCCccCCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 130 LQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
...+....+. + .-+...+|+|++++.++... ..+|. +.++|.
T Consensus 241 ~~~~~~~~p~--~---~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG 285 (291)
T 1e7w_A 241 WEGHRSKVPL--Y---QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 285 (291)
T ss_dssp HHHHHTTCTT--T---TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHhhCCC--C---CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCC
Confidence 2233222111 1 03678999999999998643 34564 456553
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.83 E-value=3.3e-08 Score=79.70 Aligned_cols=141 Identities=18% Similarity=0.157 Sum_probs=94.5
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+|||+||....... .+..+..+++|+.++.++++++. +.+..++|++||.....+...
T Consensus 131 DilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~------------- 197 (346)
T 3kvo_A 131 DILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWF------------- 197 (346)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGT-------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCC-------------
Confidence 799999998654211 12236778999999999999984 335569999999744222100
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
. ....|+.+|...+.+.+.++.+. ++.+.++.|+.++.. . +...+ .+.. ....+..
T Consensus 198 ~------~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T-------~---~~~~~-~~~~-----~~~r~~~ 255 (346)
T 3kvo_A 198 K------QHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT-------A---AMDML-GGPG-----IESQCRK 255 (346)
T ss_dssp S------SSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC-------H---HHHHH-CC-------CGGGCBC
T ss_pred C------CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc-------H---HHHhh-cccc-----ccccCCC
Confidence 0 11589999999999999988764 789999999864322 1 11111 1110 1224668
Q ss_pred HHhHHHHHHHhhcCC-CCCceEEEecC
Q 026820 151 VKDVAKAQVLLFETS-AASGRYLCTNG 176 (232)
Q Consensus 151 v~D~a~~~~~~~~~~-~~~~~~~~~~~ 176 (232)
.+|+|++++.++... ..+|.+++++.
T Consensus 256 pedvA~~v~~L~s~~~~itG~~ivdgg 282 (346)
T 3kvo_A 256 VDIIADAAYSIFQKPKSFTGNFVIDEN 282 (346)
T ss_dssp THHHHHHHHHHHTSCTTCCSCEEEHHH
T ss_pred HHHHHHHHHHHHhcCCCCCceEEECCc
Confidence 999999999999762 23566556543
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=8.3e-08 Score=73.44 Aligned_cols=141 Identities=13% Similarity=0.041 Sum_probs=96.1
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||..... ...+..+..+++|+.++..+.+++.. .+ .++|++||..+..+.+.
T Consensus 77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~------------- 142 (247)
T 3ged_A 77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPD------------- 142 (247)
T ss_dssp CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTT-------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCC-------------
Confidence 8999999986651 12234567889999999988887643 33 58999999855332221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
...|+.||...+.+.+.++.+. ++++..+-||.+--+.... . ..+.....|. .-+..
T Consensus 143 --------~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~---~----~~~~~~~~Pl------~R~g~ 201 (247)
T 3ged_A 143 --------SEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE---F----TQEDCAAIPA------GKVGT 201 (247)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC------C----CHHHHHTSTT------SSCBC
T ss_pred --------CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH---H----HHHHHhcCCC------CCCcC
Confidence 1489999999999998888654 7899999999885432211 1 1222222221 12557
Q ss_pred HHhHHHHHHHhhcCCCCCce-EEEecC
Q 026820 151 VKDVAKAQVLLFETSAASGR-YLCTNG 176 (232)
Q Consensus 151 v~D~a~~~~~~~~~~~~~~~-~~~~~~ 176 (232)
.+|+|+++++++...-.+|. ..++|.
T Consensus 202 pediA~~v~fL~s~~~iTG~~i~VDGG 228 (247)
T 3ged_A 202 PKDISNMVLFLCQQDFITGETIIVDGG 228 (247)
T ss_dssp HHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEECcC
Confidence 89999999999987667785 456553
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=8.7e-08 Score=74.98 Aligned_cols=149 Identities=15% Similarity=0.092 Sum_probs=94.5
Q ss_pred CeEEEeecCCCCCCCC-----C----chhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccceeccCCCCCCCCccCC
Q 026820 1 MGVFHLASPNTLDDPK-----D----PEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISSIVPNPNWPQGKVIDE 68 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~-----~----~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~~~~~E 68 (232)
|++||+||........ + ..+..+++|+.++.++++++... +-.++|++||..+.++...
T Consensus 81 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------- 151 (281)
T 3zv4_A 81 DTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGG--------- 151 (281)
T ss_dssp CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSS---------
T ss_pred CEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCC---------
Confidence 7999999986431110 1 13557789999999999987542 1258999999855332211
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCCChh-H------HHHHHHHhCCCC
Q 026820 69 TSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYVNAS-G------AVLQRLLQGSKD 139 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~-~------~~~~~~~~~~~~ 139 (232)
...|+.||...+.+.+.++.+. ++++.++.||.+..+-........ . .....+....+
T Consensus 152 ------------~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p- 218 (281)
T 3zv4_A 152 ------------GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLP- 218 (281)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCT-
T ss_pred ------------CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCC-
Confidence 1489999999999999988764 489999999999765322110000 0 01111111111
Q ss_pred ccCCcccCceeHHhHHHHHHHhhcCCC---CCce-EEEecC
Q 026820 140 TQEHYWLGAVHVKDVAKAQVLLFETSA---ASGR-YLCTNG 176 (232)
Q Consensus 140 ~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~-~~~~~~ 176 (232)
...+...+|+|++++.++..+. .+|. +.++|.
T Consensus 219 -----~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG 254 (281)
T 3zv4_A 219 -----IGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGG 254 (281)
T ss_dssp -----TSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSS
T ss_pred -----CCCCCCHHHHHHHHHHhhcccccccccCcEEEECCC
Confidence 2246789999999999987332 4664 566653
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.81 E-value=8.4e-08 Score=73.06 Aligned_cols=147 Identities=18% Similarity=0.120 Sum_probs=97.9
Q ss_pred CeEEEeecCCCC--CCCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTL--DDPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~--~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|++||+||.... ....++.+..+++|+.++..+.+++.. .+ .++|++||.....+.+.
T Consensus 80 DiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~--------------- 143 (242)
T 4b79_A 80 DVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSAD--------------- 143 (242)
T ss_dssp SEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSS---------------
T ss_pred CEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCC---------------
Confidence 899999998654 222234467889999999988887643 23 48999999855333221
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
...|+.||.....+.+.++.+ .|+++..+-||.+--+-.... ..-.....++....|.. -+...
T Consensus 144 ------~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~-~~~~~~~~~~~~~~Plg------R~g~p 210 (242)
T 4b79_A 144 ------RPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGL-KADVEATRRIMQRTPLA------RWGEA 210 (242)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC------CCCHHHHHHHHHTCTTC------SCBCH
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcc-cCCHHHHHHHHhcCCCC------CCcCH
Confidence 148999999999999988865 489999999999965532211 11123344444443321 25568
Q ss_pred HhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 152 KDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 152 ~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
+|+|.++++++.. .-.+|. ..++|.
T Consensus 211 eeiA~~v~fLaSd~a~~iTG~~l~VDGG 238 (242)
T 4b79_A 211 PEVASAAAFLCGPGASFVTGAVLAVDGG 238 (242)
T ss_dssp HHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhcCccCceEEECcc
Confidence 9999999999854 335664 456554
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-07 Score=73.52 Aligned_cols=139 Identities=15% Similarity=0.136 Sum_probs=84.0
Q ss_pred CeEEEeec--CC--------CC-CCCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCc
Q 026820 1 MGVFHLAS--PN--------TL-DDPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKV 65 (232)
Q Consensus 1 D~Vih~a~--~~--------~~-~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~ 65 (232)
|+|||+|| .. .. ....+..+..+++|+.++.++.+++. +.+..++|++||.+...+.
T Consensus 85 d~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 156 (260)
T 2qq5_A 85 DVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-------- 156 (260)
T ss_dssp CEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC--------
T ss_pred eEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC--------
Confidence 79999994 21 11 12233446777889988877776654 4455799999997442110
Q ss_pred cCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccC
Q 026820 66 IDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQE 142 (232)
Q Consensus 66 ~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (232)
+. ..|+.+|...|.+.+.++.+ .|+++++++||.+..+................... ..
T Consensus 157 --------~~------~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----~~ 218 (260)
T 2qq5_A 157 --------FN------VPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQ----FK 218 (260)
T ss_dssp --------SS------HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-----------------------
T ss_pred --------CC------CchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHH----HH
Confidence 11 48999999999999988754 48999999999997654221100000000000000 00
Q ss_pred CcccCceeHHhHHHHHHHhhcCC
Q 026820 143 HYWLGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~~ 165 (232)
.....+...+|+|++++.++...
T Consensus 219 ~~~~~~~~pe~va~~v~~l~s~~ 241 (260)
T 2qq5_A 219 SAFSSAETTELSGKCVVALATDP 241 (260)
T ss_dssp ---CHHHHHHHHHHHHHHHHTCT
T ss_pred hhhccCCCHHHHHHHHHHHhcCc
Confidence 00011357899999999998664
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.78 E-value=1.8e-07 Score=71.88 Aligned_cols=149 Identities=17% Similarity=0.065 Sum_probs=96.3
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||.... ....+..+..+++|+.++..+.+++. +.+-.++|++||.+...+.+.
T Consensus 86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~------------ 153 (254)
T 4fn4_A 86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFA------------ 153 (254)
T ss_dssp CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSS------------
T ss_pred CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCC------------
Confidence 899999997543 12223456788999999988887764 334458999999855333221
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|.....+.+.++.+ .|+++..+-||.|--+....................++ ..-+
T Consensus 154 ---------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-----~~R~ 219 (254)
T 4fn4_A 154 ---------GAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSL-----SSRL 219 (254)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTT-----CCCC
T ss_pred ---------ChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCC-----CCCC
Confidence 148999999999999888865 48999999999986553222111111112222111111 0125
Q ss_pred eeHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 149 VHVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
...+|+|.++++++.. .-.+|. ..++|
T Consensus 220 g~pediA~~v~fLaSd~a~~iTG~~i~VDG 249 (254)
T 4fn4_A 220 AEPEDIANVIVFLASDEASFVNGDAVVVDG 249 (254)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred cCHHHHHHHHHHHhCchhcCCcCCEEEeCC
Confidence 5689999999999854 335664 45554
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.72 E-value=8.7e-08 Score=74.69 Aligned_cols=139 Identities=16% Similarity=0.126 Sum_probs=91.3
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..+..+..+++|+.++.++++++.. .+..++|++||.....+..
T Consensus 92 D~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-------------- 157 (274)
T 3e03_A 92 DILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW-------------- 157 (274)
T ss_dssp CEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH--------------
T ss_pred CEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC--------------
Confidence 79999999865411 1123356778999999999998753 3456999999974422200
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
.+....|+.||...+.+.+.++.+ .|+.+.++.||.+...... +...+. ....+.
T Consensus 158 -----~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~-----------~~~~~~------~~~~~~ 215 (274)
T 3e03_A 158 -----WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI-----------NMLPGV------DAAACR 215 (274)
T ss_dssp -----HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------CC------CGGGSB
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh-----------hhcccc------cccccC
Confidence 001157999999999999988765 3899999999954432211 111111 112367
Q ss_pred eHHhHHHHHHHhhcCCC--CCceEEEec
Q 026820 150 HVKDVAKAQVLLFETSA--ASGRYLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~~~~~~~ 175 (232)
..+|+|++++.++.... .+|.++..+
T Consensus 216 ~pedvA~~v~~l~s~~~~~itG~~i~~~ 243 (274)
T 3e03_A 216 RPEIMADAAHAVLTREAAGFHGQFLIDD 243 (274)
T ss_dssp CTHHHHHHHHHHHTSCCTTCCSCEEEHH
T ss_pred CHHHHHHHHHHHhCccccccCCeEEEcC
Confidence 89999999999986543 356555433
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=5.6e-08 Score=81.76 Aligned_cols=149 Identities=15% Similarity=0.065 Sum_probs=100.5
Q ss_pred CeEEEeecCC-CC-CCCC---CchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcc
Q 026820 1 MGVFHLASPN-TL-DDPK---DPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLD 75 (232)
Q Consensus 1 D~Vih~a~~~-~~-~~~~---~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~ 75 (232)
|+|||+||.. .. .... +.....+++|+.++.++.+++...+..+||++||++.+++....
T Consensus 321 d~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~--------------- 385 (496)
T 3mje_A 321 TAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQ--------------- 385 (496)
T ss_dssp EEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTC---------------
T ss_pred eEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCc---------------
Confidence 6899999986 32 1111 22357889999999999999998887899999998776664431
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHH
Q 026820 76 FCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVA 155 (232)
Q Consensus 76 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 155 (232)
..|+.+|...+.+...+ +..|++++++.||.+.+.+..... .....+.+. ....+..++.+
T Consensus 386 ------~~YaAaKa~ldala~~~-~~~Gi~v~sV~pG~w~~~gm~~~~----~~~~~l~~~--------g~~~l~pe~~~ 446 (496)
T 3mje_A 386 ------PGYAAANAYLDALAEHR-RSLGLTASSVAWGTWGEVGMATDP----EVHDRLVRQ--------GVLAMEPEHAL 446 (496)
T ss_dssp ------HHHHHHHHHHHHHHHHH-HHTTCCCEEEEECEESSSCC----------CHHHHHT--------TEEEECHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHH-HhcCCeEEEEECCcccCCccccCh----HHHHHHHhc--------CCCCCCHHHHH
Confidence 48999999999998875 456999999999988765432211 111112111 12356789999
Q ss_pred HHHHHhhcCCCCCceEEEecCcccHHHHHHHH
Q 026820 156 KAQVLLFETSAASGRYLCTNGIYQFAEFAEKV 187 (232)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i 187 (232)
.++..++....... .+ -.+.|..+...+
T Consensus 447 ~~l~~~l~~~~~~~--~v--~~ldw~~~~~~~ 474 (496)
T 3mje_A 447 GALDQMLENDDTAA--AI--TLMDWEMFAPAF 474 (496)
T ss_dssp HHHHHHHHHTCSEE--EE--CEECHHHHHHHH
T ss_pred HHHHHHHcCCCceE--EE--EEccHHHHHhhh
Confidence 99999987654322 11 234555555443
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=1.3e-07 Score=72.96 Aligned_cols=129 Identities=12% Similarity=-0.002 Sum_probs=86.6
Q ss_pred eEEEeecCCCCC-------CCCCchhhhHHHHHHHHHHHHHHHHHc------CCCEEEEecccceeccCCCCCCCCccCC
Q 026820 2 GVFHLASPNTLD-------DPKDPEKELLIPAVQGTLNVLEAAKKF------GVRRVVLTSSISSIVPNPNWPQGKVIDE 68 (232)
Q Consensus 2 ~Vih~a~~~~~~-------~~~~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E 68 (232)
+|||+||..... ...+..+..+++|+.++.++++++... +..++|++||.++..+.+
T Consensus 95 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 164 (259)
T 1oaa_A 95 LLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK---------- 164 (259)
T ss_dssp EEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT----------
T ss_pred EEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCC----------
Confidence 999999985320 122345678899999999999998653 234799999984422111
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-CCcEEEEcCCCeeCCCCCCCCChhHHHH---------HHHHhCCC
Q 026820 69 TSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN-GTDVVAIHPATSLGPFPQPYVNASGAVL---------QRLLQGSK 138 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~~~~~~~~~~~---------~~~~~~~~ 138 (232)
. ...|+.+|...+.+.+.++.+. ++++.++.||.+-.+ ...... ..+....
T Consensus 165 -----~------~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~-------~~~~~~~~~~~~~~~~~~~~~~- 225 (259)
T 1oaa_A 165 -----G------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND-------MQQLARETSKDPELRSKLQKLK- 225 (259)
T ss_dssp -----T------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH-------HHHHHHHHCSCHHHHHHHHHHH-
T ss_pred -----C------ccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc-------hHHHHhhccCChhHHHHHHHhh-
Confidence 1 1589999999999999988775 588888999887432 111110 0010000
Q ss_pred CccCCcccCceeHHhHHHHHHHhhcC
Q 026820 139 DTQEHYWLGAVHVKDVAKAQVLLFET 164 (232)
Q Consensus 139 ~~~~~~~~~~i~v~D~a~~~~~~~~~ 164 (232)
....+...+|+|++++.++..
T Consensus 226 -----p~~~~~~p~dvA~~v~~l~~~ 246 (259)
T 1oaa_A 226 -----SDGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp -----HTTCSBCHHHHHHHHHHHHHH
T ss_pred -----hcCCcCCHHHHHHHHHHHHhh
Confidence 012478899999999998864
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.62 E-value=5.8e-07 Score=69.75 Aligned_cols=148 Identities=18% Similarity=0.151 Sum_probs=96.2
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|++||+||...... ..+..+..+++|+.++..+.+++... .-.++|++||.....+.+.
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~--------------- 169 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPA--------------- 169 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTT---------------
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCC---------------
Confidence 78999999866522 22244678899999999999998654 2237999999855333222
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCC--h--hHHHHHHHHhCCCCccCCcccC
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVN--A--SGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+.+.++.+. |+++..+-||.+--+....... . ...+...+....|.. -
T Consensus 170 ------~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R 237 (273)
T 4fgs_A 170 ------FSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG------R 237 (273)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS------S
T ss_pred ------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC------C
Confidence 1489999999999999988764 8999999999986543221110 1 112222332222211 2
Q ss_pred ceeHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 148 AVHVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
+...+|+|.++++++.. .-.+|. ..++|
T Consensus 238 ~g~peeiA~~v~FLaSd~a~~iTG~~i~VDG 268 (273)
T 4fgs_A 238 VGRAEEVAAAALFLASDDSSFVTGAELFVDG 268 (273)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CcCHHHHHHHHHHHhCchhcCccCCeEeECc
Confidence 55689999999999954 345664 45554
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=1.4e-06 Score=67.22 Aligned_cols=149 Identities=19% Similarity=0.153 Sum_probs=96.5
Q ss_pred CeEEEeecCCCCCCCC---CchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK---DPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~---~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|++||+||........ +..+..+++|+.++..+.+++.. .+ .++|++||..+..+.+.
T Consensus 85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~-------------- 149 (258)
T 4gkb_A 85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGN-------------- 149 (258)
T ss_dssp CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSS--------------
T ss_pred CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCC--------------
Confidence 8999999986542222 23456778999999988887642 23 48999999866444322
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCC---hhHHHHHHHHhCCCCccCCcccC
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVN---ASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+.+.++.+ .|+++..+-||.|--+....... .......++....|. .+-
T Consensus 150 -------~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-----g~R 217 (258)
T 4gkb_A 150 -------TSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL-----GRR 217 (258)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT-----TTS
T ss_pred -------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC-----CCC
Confidence 158999999999999988865 48999999999986543221100 011122223222221 113
Q ss_pred ceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
+...+|+|+++++++.. ...+|. ..++|.
T Consensus 218 ~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG 249 (258)
T 4gkb_A 218 FTTPDEIADTAVFLLSPRASHTTGEWLFVDGG 249 (258)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhcCccCCeEEECCC
Confidence 56799999999998854 335674 456553
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.58 E-value=1.2e-07 Score=75.45 Aligned_cols=154 Identities=13% Similarity=0.072 Sum_probs=79.8
Q ss_pred CeEEEeecCCC--C----CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNT--L----DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~--~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||... . ....+..+..+++|+.++.++++++... .-.++|++||.+...+.+.
T Consensus 135 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~------------- 201 (319)
T 2ptg_A 135 DILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPG------------- 201 (319)
T ss_dssp EEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC--------------------
T ss_pred CEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCc-------------
Confidence 78999999642 1 1112234577899999999999998764 1158999999754322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCeeCCCCCCCCC-hhHHHHHHHHhCCCCccCCcccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK----NGTDVVAIHPATSLGPFPQPYVN-ASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
. ...|+.+|...+.+.+.++.+ .|+++.+++||.+..+....... ....+....... .........
T Consensus 202 -~------~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~r 272 (319)
T 2ptg_A 202 -Y------GGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDY--SEANAPLQK 272 (319)
T ss_dssp ------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC---------------------------------
T ss_pred -c------chhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHH--HhccCCCCC
Confidence 0 027999999999998887754 58999999999986543211000 000000000000 000000113
Q ss_pred ceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
+...+|+|++++.++.. ...+|. +.++|.
T Consensus 273 ~~~peevA~~v~~L~s~~~~~itG~~i~vdGG 304 (319)
T 2ptg_A 273 ELESDDVGRAALFLLSPLARAVTGATLYVDNG 304 (319)
T ss_dssp CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence 56899999999999864 334564 456553
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.9e-07 Score=79.21 Aligned_cols=152 Identities=14% Similarity=0.101 Sum_probs=101.6
Q ss_pred CeEEEeecCCCCCC-CC---CchhhhHHHHHHHHHHHHHHHHHcC-----CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD-PK---DPEKELLIPAVQGTLNVLEAAKKFG-----VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~-~~---~~~~~~~~~nv~~~~~l~~~~~~~~-----~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|+|||+||...... .. +.....+++|+.|+.+|.+++.... ..+||++||++++++....
T Consensus 344 d~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~g~----------- 412 (525)
T 3qp9_A 344 SAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAGQ----------- 412 (525)
T ss_dssp EEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCTTC-----------
T ss_pred cEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCCCC-----------
Confidence 68999999875411 11 2235678999999999999998764 6799999998776554331
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
..|+.+|...+.+...+ +..|++++++.||.+ +.+.... ..... .+... ....+..
T Consensus 413 ----------~~YaaaKa~l~~lA~~~-~~~gi~v~sI~pG~~-~tgm~~~-~~~~~---~~~~~--------g~~~l~p 468 (525)
T 3qp9_A 413 ----------GAYAAGTAFLDALAGQH-RADGPTVTSVAWSPW-EGSRVTE-GATGE---RLRRL--------GLRPLAP 468 (525)
T ss_dssp ----------HHHHHHHHHHHHHHTSC-CSSCCEEEEEEECCB-TTSGGGS-SHHHH---HHHHT--------TBCCBCH
T ss_pred ----------HHHHHHHHHHHHHHHHH-HhCCCCEEEEECCcc-ccccccc-hhhHH---HHHhc--------CCCCCCH
Confidence 58999999999886554 345999999999988 3221111 11111 11111 1246789
Q ss_pred HhHHHHHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhC
Q 026820 152 KDVAKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~ 191 (232)
+++++++..++..+.. ...+ -.+.|..+...+....
T Consensus 469 ee~a~~l~~~l~~~~~--~v~v--~~~dw~~~~~~~~~~~ 504 (525)
T 3qp9_A 469 ATALTALDTALGHGDT--AVTI--ADVDWSSFAPGFTTAR 504 (525)
T ss_dssp HHHHHHHHHHHHHTCS--EEEE--CCBCHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHhCCCC--eEEE--EeCCHHHHHhhccccC
Confidence 9999999999976532 1222 2456777777665443
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.57 E-value=6.6e-07 Score=68.29 Aligned_cols=148 Identities=18% Similarity=0.074 Sum_probs=96.1
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||..... ...++.+..+++|+.++..+.+++. +.+ -.++|++||.....+.+.
T Consensus 81 DiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~------------ 148 (247)
T 4hp8_A 81 DILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIR------------ 148 (247)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSS------------
T ss_pred CEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCC------------
Confidence 8999999987651 1223456788999999999988753 233 348999999855333221
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.||.....+.+.++.+ .|+++..+-||.|--+.... ...-......+....|. .-+
T Consensus 149 ---------~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~-~~~~~~~~~~~~~~~Pl------gR~ 212 (247)
T 4hp8_A 149 ---------VPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEA-LRADAARNKAILERIPA------GRW 212 (247)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH-HHTSHHHHHHHHTTCTT------SSC
T ss_pred ---------ChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhh-cccCHHHHHHHHhCCCC------CCC
Confidence 148999999999999988765 48999999999985432110 00001122223333221 125
Q ss_pred eeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
...+|+|.++++++.. .-.+|. +.++|.
T Consensus 213 g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG 243 (247)
T 4hp8_A 213 GHSEDIAGAAVFLSSAAADYVHGAILNVDGG 243 (247)
T ss_dssp BCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence 5689999999998854 334664 456553
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.56 E-value=5.8e-07 Score=69.09 Aligned_cols=148 Identities=11% Similarity=0.065 Sum_probs=95.4
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----H-cCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----K-FGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~-~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||..... ...+..+..+++|+.++..+.+++. + .+-.++|++||.....+.+.
T Consensus 88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~------------ 155 (255)
T 4g81_D 88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPT------------ 155 (255)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTT------------
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCC------------
Confidence 8999999987652 1223446778999999999887753 2 23358999999855332221
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+ .|+++..+-||.+..+...... .-......+....|. .-+
T Consensus 156 ---------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~-~~~~~~~~~~~~~Pl------~R~ 219 (255)
T 4g81_D 156 ---------VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALI-EDKQFDSWVKSSTPS------QRW 219 (255)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHH-TCHHHHHHHHHHSTT------CSC
T ss_pred ---------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhccc-CCHHHHHHHHhCCCC------CCC
Confidence 148999999999999988865 4899999999998643211000 001111122222211 125
Q ss_pred eeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
...+|+|.++++++.. .-.+|. +.++|.
T Consensus 220 g~pediA~~v~fL~S~~a~~iTG~~i~VDGG 250 (255)
T 4g81_D 220 GRPEELIGTAIFLSSKASDYINGQIIYVDGG 250 (255)
T ss_dssp BCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence 5689999999998854 335664 566654
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=1.4e-06 Score=67.21 Aligned_cols=151 Identities=16% Similarity=0.149 Sum_probs=93.9
Q ss_pred CeEEEeecCCCCC------CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLD------DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||..... ...++.+..+++|+.++..+.+++. +.+-.++|++||.....+.+..
T Consensus 80 DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~---------- 149 (261)
T 4h15_A 80 DVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPES---------- 149 (261)
T ss_dssp SEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTT----------
T ss_pred CEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCc----------
Confidence 8999999975431 1122346778999999988887754 3454689999997553322110
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCC-----------CCChhHHHHHHHHhC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQP-----------YVNASGAVLQRLLQG 136 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~-----------~~~~~~~~~~~~~~~ 136 (232)
...|+.||...+.+.+.++.+ .|+++..+-||.+--+.... ...............
T Consensus 150 ----------~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (261)
T 4h15_A 150 ----------TTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGG 219 (261)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTC
T ss_pred ----------cHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcC
Confidence 147999999999999888865 48999999999884321000 000001111111111
Q ss_pred CCCccCCcccCceeHHhHHHHHHHhhcC--CCCCce-EEEecCc
Q 026820 137 SKDTQEHYWLGAVHVKDVAKAQVLLFET--SAASGR-YLCTNGI 177 (232)
Q Consensus 137 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~~ 177 (232)
.|. .-+...+|+|+++++++.. ...+|. +.++|.-
T Consensus 220 ~Pl------gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 220 IPL------GRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT 257 (261)
T ss_dssp CTT------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCC------CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence 111 1256799999999998854 334664 5666543
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.55 E-value=3.8e-07 Score=78.91 Aligned_cols=125 Identities=18% Similarity=0.067 Sum_probs=85.9
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..+..+..+++|+.++.++++++ ++.+..++|++||.++.++....
T Consensus 104 DiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~------------ 171 (613)
T 3oml_A 104 DILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQ------------ 171 (613)
T ss_dssp -CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTC------------
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCC------------
Confidence 78999999865411 22234678899999999999987 44455699999998666554321
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
..|+.+|...+.+.+.++.+. |+.+.++.|+.+-.. ... . .+......+
T Consensus 172 ---------~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~-~~~---~---------------~~~~~~~~~ 223 (613)
T 3oml_A 172 ---------VNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRM-TEG---I---------------LPDILFNEL 223 (613)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CC---C---------------CCHHHHTTC
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChh-hhh---c---------------cchhhhhcC
Confidence 489999999999999887653 899999999854111 000 0 011112345
Q ss_pred eHHhHHHHHHHhhcCC
Q 026820 150 HVKDVAKAQVLLFETS 165 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~ 165 (232)
..+|+|.+++.++...
T Consensus 224 ~pedvA~~v~~L~s~~ 239 (613)
T 3oml_A 224 KPKLIAPVVAYLCHES 239 (613)
T ss_dssp CGGGTHHHHHHTTSTT
T ss_pred CHHHHHHHHHHhcCCC
Confidence 7899999999988654
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=1.4e-06 Score=69.19 Aligned_cols=150 Identities=15% Similarity=0.074 Sum_probs=93.0
Q ss_pred CeEEEeecCCC--C----CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNT--L----DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~--~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||... . ....+.....+++|+.++.++++++... .-.++|++||.+...+.+.
T Consensus 122 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~------------- 188 (315)
T 2o2s_A 122 DILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVPG------------- 188 (315)
T ss_dssp EEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCCTT-------------
T ss_pred CEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEecccccccCCC-------------
Confidence 78999999652 1 1112234577899999999999998654 1148999999754322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCeeCCCCC-----CCCChhHHHHHHHHhCCCCccCC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK----NGTDVVAIHPATSLGPFPQ-----PYVNASGAVLQRLLQGSKDTQEH 143 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 143 (232)
.. ..|+.+|...+.+.+.++.+ .|+++.+++||.+-.+... ............+....+
T Consensus 189 -~~------~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p----- 256 (315)
T 2o2s_A 189 -YG------GGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAP----- 256 (315)
T ss_dssp -CC------TTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSS-----
T ss_pred -cc------HHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchhHHHHHHHHhccCC-----
Confidence 00 27999999999998887654 5899999999988543100 000011111111111111
Q ss_pred cccCceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 144 YWLGAVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
...+...+|+|++++.++.. ...+|. +.++|.
T Consensus 257 -~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 291 (315)
T 2o2s_A 257 -LRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG 291 (315)
T ss_dssp -SCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred -CCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCC
Confidence 11356899999999998864 234565 455554
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.50 E-value=5.6e-07 Score=71.03 Aligned_cols=117 Identities=18% Similarity=0.142 Sum_probs=76.8
Q ss_pred hhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCC----------------------------CCccC
Q 026820 20 KELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQ----------------------------GKVID 67 (232)
Q Consensus 20 ~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~----------------------------~~~~~ 67 (232)
+..+++|+.++.++++++.. .+..++|++||.+...+...... .....
T Consensus 146 ~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (311)
T 3o26_A 146 EECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIE 225 (311)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTT
T ss_pred hhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccc
Confidence 45689999999998888753 34569999999865443211000 00011
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 68 ETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN-GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 68 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
+..++. ....|+.||...+.+.+.++.+. ++.+.++.||.|..+-... .
T Consensus 226 ~~~~~~------~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~------------------------~ 275 (311)
T 3o26_A 226 TNGWPS------FGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYG------------------------I 275 (311)
T ss_dssp TTTCCS------SCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTT------------------------C
T ss_pred cccCcc------cchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecCCcCC------------------------C
Confidence 111111 12589999999999999998875 7999999999986432111 0
Q ss_pred CceeHHhHHHHHHHhhcCCC
Q 026820 147 GAVHVKDVAKAQVLLFETSA 166 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~~ 166 (232)
.....++.++.++.++..+.
T Consensus 276 ~~~~~~~~a~~~~~~~~~~~ 295 (311)
T 3o26_A 276 GNYTAEEGAEHVVRIALFPD 295 (311)
T ss_dssp CSBCHHHHHHHHHHHHTCCS
T ss_pred CCCCHHHHHHHHHHHHhCCC
Confidence 12467888888888776543
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.46 E-value=3.7e-07 Score=70.85 Aligned_cols=149 Identities=15% Similarity=0.075 Sum_probs=92.6
Q ss_pred CeEEEeecCCC-----C----CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNT-----L----DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~-----~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|+|||+||... . ....+.....+++|+.++.++++++... .-.++|++||.+. ++.+.
T Consensus 89 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~~---------- 157 (269)
T 2h7i_A 89 DGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMPA---------- 157 (269)
T ss_dssp EEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCTT----------
T ss_pred eEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccCc----------
Confidence 78999999764 1 1112233567889999999999999754 1148999998632 21111
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCC----C-CChhH----HHHHHHHhCC
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQP----Y-VNASG----AVLQRLLQGS 137 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~----~-~~~~~----~~~~~~~~~~ 137 (232)
...|+.+|...+.+.+.++.+ .|+++.+++||.+..+.... . ..... .....+....
T Consensus 158 -----------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (269)
T 2h7i_A 158 -----------YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA 226 (269)
T ss_dssp -----------THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccC
Confidence 158999999999999988765 38999999999885431000 0 00000 0011111111
Q ss_pred CCccCCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 138 KDTQEHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 138 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
+ ..+.+...+|+|++++.++... ..+|. +.++|.
T Consensus 227 p-----~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 263 (269)
T 2h7i_A 227 P-----IGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG 263 (269)
T ss_dssp T-----TCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred C-----cccCCCCHHHHHHHHHHHhCchhccCcceEEEecCC
Confidence 1 0113667899999999999653 34564 455543
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.42 E-value=5.9e-06 Score=63.60 Aligned_cols=148 Identities=18% Similarity=0.135 Sum_probs=95.4
Q ss_pred CeEEEeecCCCCCC-----CCCch---hhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLDD-----PKDPE---KELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~~-----~~~~~---~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||...... ..... ...+++|+.++..+.+++... .-.++|++||.+...+.+.
T Consensus 88 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~----------- 156 (256)
T 4fs3_A 88 DGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQN----------- 156 (256)
T ss_dssp SEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTT-----------
T ss_pred CEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCccc-----------
Confidence 78999999764311 11112 334577888888888777643 2248999999855333221
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+.+.++.+ .|+++..+-||.+-.+.... ..........+....|.. -
T Consensus 157 ----------~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~-~~~~~~~~~~~~~~~Pl~------R 219 (256)
T 4fs3_A 157 ----------YNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKG-VGGFNTILKEIKERAPLK------R 219 (256)
T ss_dssp ----------THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTT-CTTHHHHHHHHHHHSTTS------S
T ss_pred ----------chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhh-ccCCHHHHHHHHhcCCCC------C
Confidence 158999999999999988765 48999999999886543322 122233444444333221 2
Q ss_pred ceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
+...+|+|+++++++.. .-.+|. ..++|.
T Consensus 220 ~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG 251 (256)
T 4fs3_A 220 NVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG 251 (256)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence 45699999999999854 335674 455543
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=98.27 E-value=4.5e-06 Score=66.66 Aligned_cols=95 Identities=9% Similarity=-0.017 Sum_probs=68.9
Q ss_pred CeEEEeecCCC--C----CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNT--L----DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~--~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||... . ....+.....+++|+.++..+++++... .-.++|++||.....+.+.
T Consensus 115 DilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~------------- 181 (329)
T 3lt0_A 115 NMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPG------------- 181 (329)
T ss_dssp EEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTT-------------
T ss_pred cEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeCccccCCCCc-------------
Confidence 78999999742 1 1122234678899999999999998654 1148999999754322211
Q ss_pred Ccccccccch-hHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCeeC
Q 026820 73 DLDFCKSHKI-WYSMSKTLAEKAAWEFAEK----NGTDVVAIHPATSLG 116 (232)
Q Consensus 73 ~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G 116 (232)
.. .|+.||...+.+.+.++.+ .|+.+.++.||.+-.
T Consensus 182 --------~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T 222 (329)
T 3lt0_A 182 --------YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222 (329)
T ss_dssp --------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred --------chHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeec
Confidence 12 7999999999998877653 589999999999854
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.08 E-value=7.7e-05 Score=64.42 Aligned_cols=151 Identities=17% Similarity=0.084 Sum_probs=99.2
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..+..+..+++|+.++..+.+++. +.+-.++|++||.+..++.+.
T Consensus 397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~------------- 463 (604)
T 2et6_A 397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFG------------- 463 (604)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC-------------
Confidence 89999999864311 122346788999999999888864 333358999999866444322
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.||.....+.+.++.+ .|+.+..+-|+. ... + ...... +......
T Consensus 464 --------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~--~T~----m--~~~~~~-----------~~~~~~~ 516 (604)
T 2et6_A 464 --------QANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA--ETA----M--TLSIMR-----------EQDKNLY 516 (604)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC--CCC----C----------------------CCSS
T ss_pred --------ChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC--CCc----c--ccccCc-----------hhhccCC
Confidence 148999999999998888765 489999999972 111 1 000000 0011345
Q ss_pred eHHhHHHHHHHhhcCCC-CCce-EEEec------------------CcccHHHHHHHHHhhC
Q 026820 150 HVKDVAKAQVLLFETSA-ASGR-YLCTN------------------GIYQFAEFAEKVSKLF 191 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~-~~~~-~~~~~------------------~~~s~~el~~~i~~~~ 191 (232)
..+|++.+++.++.... .+|. +.++| ..++..++.+.+.+..
T Consensus 517 ~pe~vA~~v~~L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 578 (604)
T 2et6_A 517 HADQVAPLLVYLGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEIT 578 (604)
T ss_dssp CGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHh
Confidence 78999999999885432 4553 33332 2368888888888776
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00012 Score=69.67 Aligned_cols=131 Identities=12% Similarity=0.042 Sum_probs=84.4
Q ss_pred CeEEEeecCCCCC-CC------CCchhhhHHHHHHHHHHHHHHHHHcC------CCEEEEecccceeccCCCCCCCCccC
Q 026820 1 MGVFHLASPNTLD-DP------KDPEKELLIPAVQGTLNVLEAAKKFG------VRRVVLTSSISSIVPNPNWPQGKVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~~-~~------~~~~~~~~~~nv~~~~~l~~~~~~~~------~~~~i~~Ss~~~~~~~~~~~~~~~~~ 67 (232)
|+|||+||..... .. .+.....+.+|+.++..++++++... -.++|++||..+..+ .
T Consensus 766 DiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g--g-------- 835 (1887)
T 2uv8_A 766 DAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--G-------- 835 (1887)
T ss_dssp SEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS--C--------
T ss_pred eEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC--C--------
Confidence 7999999986432 11 12236788999999999999884331 248999999744332 0
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHH-HHHHHHHcC--CcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCc
Q 026820 68 ETSWTDLDFCKSHKIWYSMSKTLAEKA-AWEFAEKNG--TDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHY 144 (232)
Q Consensus 68 E~~~~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~~~~~--~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (232)
. ..|+.+|...+.+ ...++.+.+ +.++++.||.+-|.+........... ....+
T Consensus 836 -------~------~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~----~~~~p------ 892 (1887)
T 2uv8_A 836 -------D------GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEG----IEKMG------ 892 (1887)
T ss_dssp -------B------TTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHH----HHTTS------
T ss_pred -------C------chHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHH----HHhcC------
Confidence 1 3799999999998 555554332 88999999999753221110111111 11111
Q ss_pred ccCceeHHhHHHHHHHhhcCC
Q 026820 145 WLGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 145 ~~~~i~v~D~a~~~~~~~~~~ 165 (232)
.-+...+|+|.+++.++...
T Consensus 893 -lr~~sPEEVA~avlfLaSd~ 912 (1887)
T 2uv8_A 893 -VRTFSQKEMAFNLLGLLTPE 912 (1887)
T ss_dssp -CCCEEHHHHHHHHHGGGSHH
T ss_pred -CCCCCHHHHHHHHHHHhCCC
Confidence 13458999999999998654
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.67 E-value=8.9e-05 Score=64.01 Aligned_cols=125 Identities=19% Similarity=0.074 Sum_probs=84.2
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||..... ...+..+..+++|+.|+..+.+++. +.+-.++|++||.+..++.+.
T Consensus 93 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~------------- 159 (604)
T 2et6_A 93 HVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG------------- 159 (604)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC-------------
Confidence 8999999986431 1122346788999999999888764 334458999999866554332
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.||...+.+.+.++.+ .|+.+.++.|+ +- ..+ ... . .+.......
T Consensus 160 --------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~--------T~m---~~~----~---~~~~~~~~~ 212 (604)
T 2et6_A 160 --------QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-AR--------SRM---TES----I---MPPPMLEKL 212 (604)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CC--------CHH---HHT----T---SCHHHHTTC
T ss_pred --------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-Cc--------Ccc---ccc----c---CChhhhccC
Confidence 148999999999999888765 48999999985 21 111 000 0 000011235
Q ss_pred eHHhHHHHHHHhhcCC
Q 026820 150 HVKDVAKAQVLLFETS 165 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~ 165 (232)
..+|++.+++.++...
T Consensus 213 ~pe~vA~~v~~L~s~~ 228 (604)
T 2et6_A 213 GPEKVAPLVLYLSSAE 228 (604)
T ss_dssp SHHHHHHHHHHHTSSS
T ss_pred CHHHHHHHHHHHhCCc
Confidence 7899999999988653
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0003 Score=67.02 Aligned_cols=131 Identities=13% Similarity=0.044 Sum_probs=83.8
Q ss_pred CeEEEeecCCCCC-CCC------CchhhhHHHHHHHHHHHHHHHHHc------CCCEEEEecccceeccCCCCCCCCccC
Q 026820 1 MGVFHLASPNTLD-DPK------DPEKELLIPAVQGTLNVLEAAKKF------GVRRVVLTSSISSIVPNPNWPQGKVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~~-~~~------~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~i~~Ss~~~~~~~~~~~~~~~~~ 67 (232)
|+|||+||..... ... +.....+++|+.++.+++++++.. +..++|++||..+..+.
T Consensus 741 DiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~gg---------- 810 (1878)
T 2uv9_A 741 DYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFGN---------- 810 (1878)
T ss_dssp SEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSSC----------
T ss_pred cEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccCC----------
Confidence 7999999986432 111 223678899999999998774322 22489999997553331
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHHHH-c--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCc
Q 026820 68 ETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK-N--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHY 144 (232)
Q Consensus 68 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (232)
. ..|+.+|...+.+...+..+ . ++.++.+.||.+-|..... . ...........+
T Consensus 811 -------~------~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~---~-~~~~~~~~~~~p------ 867 (1878)
T 2uv9_A 811 -------D------GLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMS---A-NNLVAEGVEKLG------ 867 (1878)
T ss_dssp -------C------SSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCS---H-HHHTHHHHHTTT------
T ss_pred -------c------hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccc---c-chhhHHHHHhcC------
Confidence 0 37999999999987765433 1 3889999999886322111 1 111122222211
Q ss_pred ccCceeHHhHHHHHHHhhcCC
Q 026820 145 WLGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 145 ~~~~i~v~D~a~~~~~~~~~~ 165 (232)
.-....+|++.+++.++...
T Consensus 868 -lr~~sPeEVA~avlfLaSd~ 887 (1878)
T 2uv9_A 868 -VRTFSQQEMAFNLLGLMAPA 887 (1878)
T ss_dssp -CCCBCHHHHHHHHHHHHSHH
T ss_pred -CCCCCHHHHHHHHHHHhCCc
Confidence 12347999999999988543
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=97.59 E-value=4.4e-05 Score=67.99 Aligned_cols=131 Identities=18% Similarity=0.084 Sum_probs=87.6
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~ 76 (232)
|+|||+||..... ...+..+..+++|+.|+.++.+++. ... +||++||.+.+.|.+..
T Consensus 613 d~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~-~~l-~iV~~SS~ag~~g~~g~---------------- 674 (795)
T 3slk_A 613 TAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID-PDV-ALVLFSSVSGVLGSGGQ---------------- 674 (795)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC-TTS-EEEEEEETHHHHTCSSC----------------
T ss_pred EEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh-hCC-EEEEEccHHhcCCCCCC----------------
Confidence 6899999987541 1122345678899999999999983 244 89999998776665432
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhH-HHHHHHHhCCCCccCCcccCceeHHhHH
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASG-AVLQRLLQGSKDTQEHYWLGAVHVKDVA 155 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~v~D~a 155 (232)
..|+.+|...+.+...+. ..|++++.+-||.+-..... .... .....+.+. ....+..++..
T Consensus 675 -----~~YaAaka~~~alA~~~~-~~Gi~v~sI~pG~v~t~g~~---~~~~~~~~~~~~~~--------g~~~l~~~e~~ 737 (795)
T 3slk_A 675 -----GNYAAANSFLDALAQQRQ-SRGLPTRSLAWGPWAEHGMA---STLREAEQDRLARS--------GLLPISTEEGL 737 (795)
T ss_dssp -----HHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCCSCCCHH---HHHHHHHHHHHHHT--------TBCCCCHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHHH-HcCCeEEEEECCeECcchhh---ccccHHHHHHHHhc--------CCCCCCHHHHH
Confidence 589999988888777654 56999999999987533210 0111 111122211 22456788888
Q ss_pred HHHHHhhcCCC
Q 026820 156 KAQVLLFETSA 166 (232)
Q Consensus 156 ~~~~~~~~~~~ 166 (232)
..+..++....
T Consensus 738 ~~~~~~l~~~~ 748 (795)
T 3slk_A 738 SQFDAACGGAH 748 (795)
T ss_dssp HHHHHHHTSSC
T ss_pred HHHHHHHhCCC
Confidence 88888886654
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00011 Score=68.36 Aligned_cols=131 Identities=13% Similarity=0.024 Sum_probs=80.7
Q ss_pred CeEEEeecCCCCC-CCC------CchhhhHHHHHHHHHHHHHHHHHc------CCCEEEEecccceeccCCCCCCCCccC
Q 026820 1 MGVFHLASPNTLD-DPK------DPEKELLIPAVQGTLNVLEAAKKF------GVRRVVLTSSISSIVPNPNWPQGKVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~~-~~~------~~~~~~~~~nv~~~~~l~~~~~~~------~~~~~i~~Ss~~~~~~~~~~~~~~~~~ 67 (232)
|+|||+||..... ... +.....+++|+.++.+++++++.. +-.++|++||.++..+ .
T Consensus 567 DILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G--g-------- 636 (1688)
T 2pff_A 567 DAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--G-------- 636 (1688)
T ss_dssp CEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS--C--------
T ss_pred eEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC--C--------
Confidence 7999999986432 111 123678899999999999987332 1247999999744322 0
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHH-HHHHHHc--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCc
Q 026820 68 ETSWTDLDFCKSHKIWYSMSKTLAEKAA-WEFAEKN--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHY 144 (232)
Q Consensus 68 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~-~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (232)
. ..|+.||...+.+. ..++.+. .+.++.+.||.+-|.......... ... ....
T Consensus 637 -------~------saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~----~~~-------l~~i 692 (1688)
T 2pff_A 637 -------D------GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNII----AEG-------IEKM 692 (1688)
T ss_dssp -------B------TTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTC----STT-------TSSS
T ss_pred -------c------hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHH----HHH-------HHhC
Confidence 1 47999999999984 3333322 277788888888643221110000 000 0011
Q ss_pred ccCceeHHhHHHHHHHhhcCC
Q 026820 145 WLGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 145 ~~~~i~v~D~a~~~~~~~~~~ 165 (232)
.......+|+|++++.++...
T Consensus 693 plR~~sPEEVA~aIlFLaSd~ 713 (1688)
T 2pff_A 693 GVRTFSQKEMAFNLLGLLTPE 713 (1688)
T ss_dssp SCCCCCCCTTHHHHHHHTSTT
T ss_pred CCCCCCHHHHHHHHHHHhCCC
Confidence 112347899999999988654
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0056 Score=49.81 Aligned_cols=142 Identities=9% Similarity=0.027 Sum_probs=76.7
Q ss_pred hhhHHHHHHHHH-HHHHHHHHcC----CCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHH
Q 026820 20 KELLIPAVQGTL-NVLEAAKKFG----VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKA 94 (232)
Q Consensus 20 ~~~~~~nv~~~~-~l~~~~~~~~----~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~ 94 (232)
+..+++|..++. .+++++...+ -.++|.+||++...+.+.. . ...|+.+|...+.+
T Consensus 196 ~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~-------------~------~~aY~AaKaal~~l 256 (405)
T 3zu3_A 196 DSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIY-------------W------NGSIGAAKKDLDQK 256 (405)
T ss_dssp HHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTT-------------T------TSHHHHHHHHHHHH
T ss_pred HHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCc-------------c------chHHHHHHHHHHHH
Confidence 445566666655 4555543221 1379999997543222210 0 03899999999999
Q ss_pred HHHHHHH---c-CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHHhhcCCCCCce
Q 026820 95 AWEFAEK---N-GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSAASGR 170 (232)
Q Consensus 95 ~~~~~~~---~-~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~ 170 (232)
.+.++.+ . |+++.++-||.+--+.... ..........+.+ +.. .+-.-+|+++++.+++... ..|.
T Consensus 257 trsLA~Ela~~~GIRVNaVaPG~i~T~~s~~-ip~~p~y~~~l~~--~mk------r~G~~Ed~a~~i~~L~sd~-l~~~ 326 (405)
T 3zu3_A 257 VLAIRESLAAHGGGDARVSVLKAVVSQASSA-IPMMPLYLSLLFK--VMK------EKGTHEGCIEQVYSLYKDS-LCGD 326 (405)
T ss_dssp HHHHHHHHHTTTSCEEEEEECCCCCCHHHHT-STTHHHHHHHHHH--HHH------HHTCCCCHHHHHHHHHHHT-TSSS
T ss_pred HHHHHHHhCcccCeEEEEEEeCCCcCchhhc-CCCCcHHHHHHHH--HHh------cCCCcHHHHHHHHHHHhcc-ccCC
Confidence 9888765 4 7899999999885432110 1111111111111 000 1223678999999888542 2221
Q ss_pred -EEEecC---cccHHHHHHHHHhh
Q 026820 171 -YLCTNG---IYQFAEFAEKVSKL 190 (232)
Q Consensus 171 -~~~~~~---~~s~~el~~~i~~~ 190 (232)
-.+.++ .+.-.|+-+.+++.
T Consensus 327 ~~~~D~~~~~r~d~~e~~~~~q~~ 350 (405)
T 3zu3_A 327 SPHMDQEGRLRADYKELDPEVQNQ 350 (405)
T ss_dssp CCCBCTTSCEECCHHHHCHHHHHH
T ss_pred CCCcCCCcCCCCchhhcCHHHHHH
Confidence 123322 14556665555543
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0051 Score=61.22 Aligned_cols=93 Identities=19% Similarity=0.158 Sum_probs=63.8
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+|||+||.... ....+..+..+++|+.|+.++.+++... ...+||++||.++..+.+..
T Consensus 1966 d~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~-------------- 2031 (2512)
T 2vz8_A 1966 GGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQ-------------- 2031 (2512)
T ss_dssp EEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTC--------------
T ss_pred cEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCc--------------
Confidence 689999997543 1223345678899999999998887653 33589999998665543321
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCee
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSL 115 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~ 115 (232)
..|+.+|...+.+.+... ..|++...+-++.+-
T Consensus 2032 -------~~Y~aaKaal~~l~~~rr-~~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A 2032 -------ANYGFANSAMERICEKRR-HDGLPGLAVQWGAIG 2064 (2512)
T ss_dssp -------HHHHHHHHHHHHHHHHHH-HTTSCCCEEEECCBC
T ss_pred -------HHHHHHHHHHHHHHHHHH-HCCCcEEEEEccCcC
Confidence 489999999999988754 458988888877653
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0019 Score=51.47 Aligned_cols=104 Identities=15% Similarity=0.065 Sum_probs=67.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CC-EEEEecccceeccCCCCCCCCccCCCCCCCccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VR-RVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCK 78 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~-~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~ 78 (232)
|+|||+||.... ...+..++...|+.+++++++++.+.+ .+ ++|++|.-..+-- . .+.+..+--|.
T Consensus 85 D~Vi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t--~-----~~~~~~~~~p~--- 152 (329)
T 1b8p_A 85 DVALLVGARPRG--PGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNA--Y-----IAMKSAPSLPA--- 152 (329)
T ss_dssp SEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH--H-----HHHHTCTTSCG---
T ss_pred CEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHH--H-----HHHHHcCCCCH---
Confidence 799999997543 223457889999999999999999984 66 8999887311000 0 00111100000
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCC
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF 118 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~ 118 (232)
...++.++....++...+++..|++...++...|+|..
T Consensus 153 --~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H 190 (329)
T 1b8p_A 153 --KNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH 190 (329)
T ss_dssp --GGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred --HHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence 12466667777777777777778877777766677843
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.011 Score=46.66 Aligned_cols=47 Identities=4% Similarity=-0.120 Sum_probs=37.8
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSS 50 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss 50 (232)
|+|||+||.... ...+..++...|+.+++++++++.+.+ +.+|+++|
T Consensus 76 D~Vi~~Ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~S 122 (313)
T 1hye_A 76 DVVIITSGVPRK--EGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT 122 (313)
T ss_dssp SEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred CEEEECCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence 799999997543 123457889999999999999999998 77776665
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=96.06 E-value=0.02 Score=46.97 Aligned_cols=76 Identities=12% Similarity=-0.015 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCeeCCCCCCCCChhHHH---HHHHHhCCCCccCCcccCceeHHhH
Q 026820 82 IWYSMSKTLAEKAAWEFAEK----NGTDVVAIHPATSLGPFPQPYVNASGAV---LQRLLQGSKDTQEHYWLGAVHVKDV 154 (232)
Q Consensus 82 ~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i~G~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~v~D~ 154 (232)
..|+.+|...+.+.+.++.+ .|+++.++-||.|--+.... ....... +.+.++. .--.+|+
T Consensus 258 ~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~s~~-ip~~p~y~~~~~~~mk~-----------~G~~E~v 325 (418)
T 4eue_A 258 GTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKASAY-IPTFPLYAAILYKVMKE-----------KNIHENC 325 (418)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHHHHT-STTHHHHHHHHHHHHHH-----------TTCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChhhhc-CCCCcHHHHHHHHHHhh-----------cCChHHH
Confidence 38999999999998888754 58999999999885432110 1111111 1111111 1226788
Q ss_pred HHHHHHhhcCCCCCc
Q 026820 155 AKAQVLLFETSAASG 169 (232)
Q Consensus 155 a~~~~~~~~~~~~~~ 169 (232)
++.+..++...-.+|
T Consensus 326 ~e~~~~L~sd~~~~g 340 (418)
T 4eue_A 326 IMQIERMFSEKIYSN 340 (418)
T ss_dssp HHHHHHHHHHTTSSS
T ss_pred HHHHHHHhhccccCC
Confidence 988888886544444
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.006 Score=49.96 Aligned_cols=116 Identities=10% Similarity=0.001 Sum_probs=65.4
Q ss_pred hhHHHHHHHHH-HHHHHHHHcC----CCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHH
Q 026820 21 ELLIPAVQGTL-NVLEAAKKFG----VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAA 95 (232)
Q Consensus 21 ~~~~~nv~~~~-~l~~~~~~~~----~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~ 95 (232)
..+++|..++. .+++++...+ -.++|++||.+...+.+. .....|+.||...+.+.
T Consensus 212 ~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~-------------------~~~~aY~ASKaAl~~lT 272 (422)
T 3s8m_A 212 DTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPI-------------------YWHGALGKAKVDLDRTA 272 (422)
T ss_dssp HHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHH-------------------HTSHHHHHHHHHHHHHH
T ss_pred HHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCC-------------------ccchHHHHHHHHHHHHH
Confidence 34444444443 5566554322 137999999744211110 00147999999999999
Q ss_pred HHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHHhhcC
Q 026820 96 WEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFET 164 (232)
Q Consensus 96 ~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~ 164 (232)
+.++.+ .|+++.++-||.|--+.... ..........+.+ +.. ..--.+|+++++.+++..
T Consensus 273 rsLA~Ela~~GIRVNaVaPG~i~T~~~~~-ip~~~~~~~~~~~--~m~------r~G~pEdva~~v~~L~sd 335 (422)
T 3s8m_A 273 QRLNARLAKHGGGANVAVLKSVVTQASAA-IPVMPLYISMVYK--IMK------EKGLHEGTIEQLDRLFRE 335 (422)
T ss_dssp HHHHHHHHTTTCEEEEEEECCCCCTTGGG-STHHHHHHHHHHH--HHH------HTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHhCccCEEEEEEEcCCCcChhhhc-CCCChHHHHHHHh--hhc------CCcChHHHHHHHHHHhcc
Confidence 888765 48999999999986543211 1111211111110 000 112258899999888754
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=95.72 E-value=0.022 Score=44.72 Aligned_cols=48 Identities=15% Similarity=0.017 Sum_probs=38.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSS 50 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss 50 (232)
|+|||+||.... ...+..++...|+.+++++++++.+.+.+.+|+++|
T Consensus 72 DvVi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S 119 (303)
T 1o6z_A 72 DVVVITAGIPRQ--PGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119 (303)
T ss_dssp SEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred CEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 899999997543 122346789999999999999999998777777665
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=95.47 E-value=0.024 Score=45.01 Aligned_cols=48 Identities=17% Similarity=0.002 Sum_probs=37.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSS 50 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss 50 (232)
|+|||+||.... ...+..++...|+.+++++++++.+.+.+.+|+++|
T Consensus 78 DvVi~~ag~~~~--~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S 125 (326)
T 1smk_A 78 DLIIVPAGVPRK--PGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS 125 (326)
T ss_dssp SEEEECCCCCCC--SSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred CEEEEcCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 899999997543 122346789999999999999999988776777665
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=92.53 E-value=0.69 Score=47.18 Aligned_cols=95 Identities=14% Similarity=0.062 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHHHHHHH--c--CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHH
Q 026820 83 WYSMSKTLAEKAAWEFAEK--N--GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQ 158 (232)
Q Consensus 83 ~Y~~sK~~~E~~~~~~~~~--~--~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 158 (232)
.|+.||...+.+.+.++.+ . ++.++.+-||.+-+............. .... + ......+|+|.++
T Consensus 2305 aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~~~----~~~~----~---~r~~~PeEIA~av 2373 (3089)
T 3zen_D 2305 AYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIVSA----VEEA----G---VTTYTTDEMAAML 2373 (3089)
T ss_dssp SHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTHHH----HGGG----S---CBCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhHHHH----HHhc----C---CCCCCHHHHHHHH
Confidence 7999999999999998877 3 577888889988754322111111111 1111 1 1223789999999
Q ss_pred HHhhcCCC---CCc--eE-EEec---C-cccHHHHHHHHH
Q 026820 159 VLLFETSA---ASG--RY-LCTN---G-IYQFAEFAEKVS 188 (232)
Q Consensus 159 ~~~~~~~~---~~~--~~-~~~~---~-~~s~~el~~~i~ 188 (232)
+.++.... ..+ .+ .++| . ..++.++...++
T Consensus 2374 lfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~ 2413 (3089)
T 3zen_D 2374 LDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKAR 2413 (3089)
T ss_dssp HHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHH
T ss_pred HHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHH
Confidence 99885321 112 22 2223 2 368888888664
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=91.07 E-value=0.47 Score=37.65 Aligned_cols=49 Identities=16% Similarity=0.058 Sum_probs=38.4
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCC--EEEEeccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVR--RVVLTSSI 51 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~--~~i~~Ss~ 51 (232)
|+|||+||.... .-.+..++++.|+..++++++++.+.+.+ ++|.+|.-
T Consensus 81 DvVvitAg~prk--pG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP 131 (333)
T 5mdh_A 81 DVAILVGSMPRR--DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP 131 (333)
T ss_dssp SEEEECCSCCCC--TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred CEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence 799999987533 23456788999999999999999998764 57777653
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=81.34 E-value=4.2 Score=31.80 Aligned_cols=49 Identities=12% Similarity=0.003 Sum_probs=36.8
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCC-EEEEeccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVR-RVVLTSSI 51 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~i~~Ss~ 51 (232)
|+||+++|.... ...+..++...|+..++.+++.+.+.+.+ ++|++|.-
T Consensus 70 DvVvi~ag~~~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNP 119 (314)
T 1mld_A 70 DVVVIPAGVPRK--PGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNP 119 (314)
T ss_dssp SEEEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred CEEEECCCcCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCC
Confidence 799999998653 12334678899999999999999887543 67776543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 232 | ||||
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 2e-17 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-13 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 3e-13 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 2e-11 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 1e-10 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 1e-07 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 3e-06 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 6e-04 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 8e-04 |
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.4 bits (190), Expect = 2e-17
Identities = 43/205 (20%), Positives = 76/205 (37%), Gaps = 16/205 (7%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQ 62
++HLASP + + + L GTLN+L AK+ G R++L S+ P
Sbjct: 69 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHP- 126
Query: 63 GKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP- 121
E W ++ Y K +AE + + ++ G +V + GP
Sbjct: 127 ---QSEDYWGHVNPIGPRA-CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN 182
Query: 122 YVNASGAVLQRLLQGSK------DTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTN 175
+ + LQG +Q + +V D+ V L ++ +S L
Sbjct: 183 DGRVVSNFILQALQGEPLTVYGSGSQTRAFQ---YVSDLVNGLVALMNSNVSSPVNLGNP 239
Query: 176 GIYQFAEFAEKVSKLFPEYPIHRFV 200
+ EFA+ + L +F+
Sbjct: 240 EEHTILEFAQLIKNLVGSGSEIQFL 264
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 66.8 bits (162), Expect = 1e-13
Identities = 40/206 (19%), Positives = 64/206 (31%), Gaps = 22/206 (10%)
Query: 3 VFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQ 62
+ H A+ + +D VQGT +L+ A GV RVV S+ +
Sbjct: 80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGS- 138
Query: 63 GKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY 122
E+S + + Y+ SK ++ A + G DV + GP+ P
Sbjct: 139 ---WTESSPLEPNSP------YAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE 189
Query: 123 VNASGAVLQRLLQGSKDT------QEHYWLGAVHVKDVAKAQVLLFETSAASGRYL--CT 174
+ LL G W VH D + L+ A Y
Sbjct: 190 -KLIPLFVTNLLDGGTLPLYGDGANVREW---VHTDDHCRGIALVLAGGRAGEIYHIGGG 245
Query: 175 NGIYQFAEFAEKVSKLFPEYPIHRFV 200
+ + L ++ R V
Sbjct: 246 LELTNRELTGILLDSLGADWSSVRKV 271
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 65.9 bits (160), Expect = 3e-13
Identities = 33/190 (17%), Positives = 62/190 (32%), Gaps = 19/190 (10%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGV---------RRVVLTSSIS 52
V HLA+ + +D + + GT +LE A+K+ R S+
Sbjct: 76 AVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE 135
Query: 53 SIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPA 112
P+ + + + YS SK ++ + G + + +
Sbjct: 136 VYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCS 195
Query: 113 TSLGPFPQPYVNASGAVLQRLLQGSK------DTQEHYWLGAVHVKDVAKAQVLLFETSA 166
+ GP+ P V+ L+G Q W ++V+D A+A ++
Sbjct: 196 NNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDW---LYVEDHARALHMVVTEGK 251
Query: 167 ASGRYLCTNG 176
A Y
Sbjct: 252 AGETYNIGGH 261
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 60.6 bits (146), Expect = 2e-11
Identities = 31/187 (16%), Positives = 56/187 (29%), Gaps = 21/187 (11%)
Query: 27 VQGTLNVLEAAKKFGVR---RVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIW 83
GTL +LEA + G+ R S+ P ET+ +S
Sbjct: 106 AMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIP----QKETTPFY---PRSP--- 155
Query: 84 YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEH 143
Y+++K A + E G P + + + + + ++ +
Sbjct: 156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPR-RGETFVTRKITRAIANIAQGLESC 214
Query: 144 YWLG-------AVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLFPEYPI 196
+LG H KD K Q ++ + + T Y +F E +
Sbjct: 215 LYLGNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLR 274
Query: 197 HRFVCVC 203
V
Sbjct: 275 FEGTGVE 281
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 58.0 bits (139), Expect = 1e-10
Identities = 17/120 (14%), Positives = 41/120 (34%), Gaps = 6/120 (5%)
Query: 3 VFHLASPNT-LDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
V+ A+ + + + + N++ AA + V +++ S P
Sbjct: 58 VYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQP 117
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
+ E+ +++ Y+++K K + + G D ++ P GP
Sbjct: 118 ----MAESELLQGTLEPTNE-PYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNF 172
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 49.2 bits (116), Expect = 1e-07
Identities = 24/170 (14%), Positives = 53/170 (31%), Gaps = 10/170 (5%)
Query: 28 QGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMS 87
+ N++EAA+ G++R SS P + Q + + + + + + +
Sbjct: 109 MISFNMIEAARINGIKRFF---YASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLE 165
Query: 88 KTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147
K E+ + + G + GPF A + T G
Sbjct: 166 KLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWG 225
Query: 148 A-------VHVKDVAKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKL 190
+ + + + L ++ + ++ + E AE V
Sbjct: 226 DGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSF 275
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.6 bits (104), Expect = 3e-06
Identities = 19/98 (19%), Positives = 27/98 (27%), Gaps = 13/98 (13%)
Query: 27 VQGTLNVLEAAKKFGVR---RVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIW 83
GTL +L+A K G+ + S+ P ET+ +S
Sbjct: 107 GVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIP----QKETTPFY---PRS---P 156
Query: 84 YSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
Y +K A F E V P
Sbjct: 157 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGA 194
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 38.0 bits (87), Expect = 6e-04
Identities = 25/179 (13%), Positives = 49/179 (27%), Gaps = 19/179 (10%)
Query: 27 VQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSM 86
+ G LN+L AA+ V+ +S S+ +P P E + Y++
Sbjct: 119 IDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLP----KVEDTIGK------PLSPYAV 168
Query: 87 SKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP---YVNASGAVLQRLLQGSK----- 138
+K + E A F+ G + + G P Y ++QG
Sbjct: 169 TKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYING 228
Query: 139 -DTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLFPEYPI 196
+ + + + G + + E +
Sbjct: 229 DGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGV 287
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 37.6 bits (86), Expect = 8e-04
Identities = 25/139 (17%), Positives = 48/139 (34%)
Query: 2 GVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP 61
V H A + + E V GTL ++ A + V+ + +SS + P P
Sbjct: 76 TVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIP 135
Query: 62 QGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQP 121
+ + + ++ + W A + V HP+ +G PQ
Sbjct: 136 YVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQG 195
Query: 122 YVNASGAVLQRLLQGSKDT 140
N + ++ G +D+
Sbjct: 196 IPNNLMPYIAQVAVGRRDS 214
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 232 | |||
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.97 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.96 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.96 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.95 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.94 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.93 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.92 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.92 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.92 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.91 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.91 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.91 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.9 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.9 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.89 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.89 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.88 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.87 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.81 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.81 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.79 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.76 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.74 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.73 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.65 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.51 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.39 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.36 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.35 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 98.85 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 98.8 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 98.78 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.74 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 98.72 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 98.7 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.7 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.69 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.69 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.69 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.69 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.67 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.66 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 98.65 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.65 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 98.64 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.64 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.63 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 98.63 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.63 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 98.62 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 98.62 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.62 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.6 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.6 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 98.59 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.57 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.56 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.55 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.55 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 98.53 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 98.51 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 98.5 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.49 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.44 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.44 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.42 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.42 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.4 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.34 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.32 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.25 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.25 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.25 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.19 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.18 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 98.17 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.16 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.12 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.1 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.08 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 98.07 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.06 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 98.03 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 97.99 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 97.96 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 97.93 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 97.91 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 97.82 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 97.79 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 97.76 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 97.65 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 97.46 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 97.45 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 97.16 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 97.13 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 96.57 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 85.69 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 81.7 |
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.97 E-value=3.4e-30 Score=205.09 Aligned_cols=180 Identities=21% Similarity=0.206 Sum_probs=155.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|+|+|+..........+.+.++.|+.++.+++++|.+.++++|||+||+ .+||... ..+++|+++..|.
T Consensus 78 d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~-~~yg~~~---~~~~~E~~~~~p~----- 148 (322)
T d1r6da_ 78 DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTN-QVYGSID---SGSWTESSPLEPN----- 148 (322)
T ss_dssp CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEG-GGGCCCS---SSCBCTTSCCCCC-----
T ss_pred ceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecc-eeecCCC---CCCCCCCCCCCCC-----
Confidence 789999988655333345678889999999999999999999999999997 7788765 5568999988887
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCC--cccCceeHHhHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEH--YWLGAVHVKDVAKA 157 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~~ 157 (232)
+.|+.+|..+|.++..+.++++++++++||+++|||++... ..+..++.++..++++. +++ +.++|+|++|+|++
T Consensus 149 -~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~a 226 (322)
T d1r6da_ 149 -SPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRG 226 (322)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC-cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHH
Confidence 59999999999999999999999999999999999987654 47788899999998876 444 78899999999999
Q ss_pred HHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 158 QVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 158 ~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+..+++++..++.|+++ ++..++.|+++.+.+.+
T Consensus 227 i~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 261 (322)
T d1r6da_ 227 IALVLAGGRAGEIYHIGGGLELTNRELTGILLDSL 261 (322)
T ss_dssp HHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCeeEEeecccchhHHHHHHHHHHh
Confidence 99999888776678664 67899999999999887
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=7.1e-29 Score=200.10 Aligned_cols=180 Identities=17% Similarity=0.118 Sum_probs=148.7
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCC---CEEEEecccceeccCCCCCCCCccCCCCCCCcccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGV---RRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC 77 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~---~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~ 77 (232)
|+|||+|+..+......++..+++.|+.||.||+++|++.++ ++|||+||+ .+||.+. ..+++|+++..|.
T Consensus 80 d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~-~vYG~~~---~~~~~E~~~~~P~-- 153 (357)
T d1db3a_ 80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTS-ELYGLVQ---EIPQKETTPFYPR-- 153 (357)
T ss_dssp SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG-GGGTTCC---SSSBCTTSCCCCC--
T ss_pred CEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEch-hhhCCCC---CCCcCCCCCCCCC--
Confidence 799999999887666677889999999999999999998755 379999997 7898655 5579999988776
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC--ChhHHHHHHHHhCCCCc--cCC--cccCceeH
Q 026820 78 KSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV--NASGAVLQRLLQGSKDT--QEH--YWLGAVHV 151 (232)
Q Consensus 78 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~--~~~--~~~~~i~v 151 (232)
++|+.||+.+|++++.++++.+++++++||+++|||...... ..+...+..+..+++.. +|+ +.++|+|+
T Consensus 154 ----~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v 229 (357)
T d1db3a_ 154 ----SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHA 229 (357)
T ss_dssp ----SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEH
T ss_pred ----ChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceee
Confidence 699999999999999999888999999999999999754432 23445566666666544 444 77899999
Q ss_pred HhHHHHHHHhhcCCCCCceEEE-ecCcccHHHHHHHHHhhC
Q 026820 152 KDVAKAQVLLFETSAASGRYLC-TNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~ 191 (232)
+|+++++..++++.. .+.|++ +|+.+|++|+++.+.+.+
T Consensus 230 ~D~~~a~~~~~~~~~-~~~yni~sg~~~s~~~~~~~~~~~~ 269 (357)
T d1db3a_ 230 KDYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQL 269 (357)
T ss_dssp HHHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTT
T ss_pred chHHHHHHHHHhCCC-CCeEEECCCCceehHHHHHHHHHHh
Confidence 999999999997753 456755 578899999999999887
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.7e-29 Score=199.02 Aligned_cols=184 Identities=22% Similarity=0.275 Sum_probs=148.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+..+......++.+.++.|+.++.+|+++|++.++ ++||+||+ ++|+... ..+++|+..... .+..+
T Consensus 67 d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~-~vy~~~~---~~~~~e~~~~~~-~~~~p 140 (312)
T d2b69a1 67 DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTS-EVYGDPE---VHPQSEDYWGHV-NPIGP 140 (312)
T ss_dssp SEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEG-GGGBSCS---SSSBCTTCCCBC-CSSST
T ss_pred CEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEECh-heecCCC---CCCCCccccCCC-CCCCC
Confidence 799999998765333456788999999999999999999986 89999997 7788755 334666543221 11233
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC-ChhHHHHHHHHhCCCCc-cCC--cccCceeHHhHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV-NASGAVLQRLLQGSKDT-QEH--YWLGAVHVKDVAK 156 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~a~ 156 (232)
.++|+.+|..+|.+++.++++++++++++||+.+|||+..... ..+..++.++..|+++. +++ +.++|+|++|+++
T Consensus 141 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~ 220 (312)
T d2b69a1 141 RACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVN 220 (312)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHH
Confidence 4799999999999999999999999999999999999876543 46678899999998876 444 6789999999999
Q ss_pred HHHHhhcCCCCCceEEE-ecCcccHHHHHHHHHhhC
Q 026820 157 AQVLLFETSAASGRYLC-TNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~ 191 (232)
++..+++.. ..+.|++ +++.+++.++++.+++.+
T Consensus 221 ~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~i~~~~ 255 (312)
T d2b69a1 221 GLVALMNSN-VSSPVNLGNPEEHTILEFAQLIKNLV 255 (312)
T ss_dssp HHHHHHTSS-CCSCEEESCCCEEEHHHHHHHHHHHH
T ss_pred HHHHHHhhc-cCCceEecCCcccchhhHHHHHHHHh
Confidence 999988655 4556765 578899999999999987
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.95 E-value=1.4e-27 Score=192.66 Aligned_cols=183 Identities=19% Similarity=0.200 Sum_probs=145.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC---------CCEEEEecccceeccCCCCCCC-------C
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG---------VRRVVLTSSISSIVPNPNWPQG-------K 64 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~---------~~~~i~~Ss~~~~~~~~~~~~~-------~ 64 (232)
|+||||||..+......++..++++|+.++.+++++|.+.+ +++||++||+ .+||.....+. .
T Consensus 75 d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~-~vyg~~~~~~~~~~~~~~~ 153 (361)
T d1kewa_ 75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD-EVYGDLPHPDEVENSVTLP 153 (361)
T ss_dssp SEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEG-GGGCCCCCGGGSCTTSCCC
T ss_pred CEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccc-eeeCCCccCCccccccCCC
Confidence 79999999866433334567899999999999999998764 4589999997 77886542210 0
Q ss_pred ccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCC
Q 026820 65 VIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEH 143 (232)
Q Consensus 65 ~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 143 (232)
...|+.+..| .+.|+.+|.++|+++..+.++.+++++++||+++|||..... ..+..++.++..|+++. +++
T Consensus 154 ~~~e~~~~~p------~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~g~~~~v~g~ 226 (361)
T d1kewa_ 154 LFTETTAYAP------SSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGK 226 (361)
T ss_dssp CBCTTSCCCC------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETT
T ss_pred CcccCCCCCC------CCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC-cHHHHHHHHHHcCCCcEEeCC
Confidence 1223333333 369999999999999999988999999999999999987654 47788899999999876 444
Q ss_pred --cccCceeHHhHHHHHHHhhcCCCCCceEEEe-cCcccHHHHHHHHHhhC
Q 026820 144 --YWLGAVHVKDVAKAQVLLFETSAASGRYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 144 --~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+.|+|+|++|+|+++..++++....+.||++ +...++.|+++.+.+.+
T Consensus 227 g~~~r~~i~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~ 277 (361)
T d1kewa_ 227 GDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLL 277 (361)
T ss_dssp SCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHH
T ss_pred CCeEEeCEEHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhc
Confidence 7889999999999999999888776688775 67799999999988653
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.94 E-value=7.9e-27 Score=186.86 Aligned_cols=181 Identities=16% Similarity=0.101 Sum_probs=150.3
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|.|+|+++.........++...++.|+.|+.+|+++|.+.+++++||+||. .+||... +.+.+|+++..|.
T Consensus 93 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~-~vyg~~~---~~~~~E~~~~~p~----- 163 (341)
T d1sb8a_ 93 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASS-STYGDHP---GLPKVEDTIGKPL----- 163 (341)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG-GGGTTCC---CSSBCTTCCCCCC-----
T ss_pred cccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccc-eeeCCCC---CCCccCCCCCCCC-----
Confidence 468999887654333456678999999999999999999999999999997 7788665 5669999988876
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC---ChhHHHHHHHHhCCCCc-cCC--cccCceeHHhH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV---NASGAVLQRLLQGSKDT-QEH--YWLGAVHVKDV 154 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~-~~~--~~~~~i~v~D~ 154 (232)
+.|+.+|..+|+++..+.+..+++++++||+.+||+...+.. ..+..++.++..|+++. +++ +.++|+|++|+
T Consensus 164 -~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~ 242 (341)
T d1sb8a_ 164 -SPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT 242 (341)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred -CcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEecc
Confidence 599999999999999999899999999999999999865432 35567788889998876 554 78899999999
Q ss_pred HHHHHHhhcCCC-CCc-eEEEe-cCcccHHHHHHHHHhhC
Q 026820 155 AKAQVLLFETSA-ASG-RYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 155 a~~~~~~~~~~~-~~~-~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+.++..++.... ..+ .|+++ ++..|+.|+++.+++.+
T Consensus 243 ~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~ 282 (341)
T d1sb8a_ 243 VQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGL 282 (341)
T ss_dssp HHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred chhhhhhhhccccccceeeeecccccchHHHHHHHHHHHh
Confidence 999999886643 233 67665 57799999999999775
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.93 E-value=2.3e-25 Score=178.32 Aligned_cols=199 Identities=27% Similarity=0.309 Sum_probs=152.7
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc-CCCEEEEecccceeccCCCCCCCCccCCCCCCC------
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD------ 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~------ 73 (232)
|+|+|+++.... ...+..++..|+.||.+++++|.+. +++++||+||++++++..........+|+.+..
T Consensus 85 ~~v~~~a~~~~~---~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 161 (342)
T d1y1pa1 85 AGVAHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKA 161 (342)
T ss_dssp SEEEECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHH
T ss_pred hhhhhhcccccc---cccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccc
Confidence 689999998775 5667888899999999999999987 799999999986555543332233344443321
Q ss_pred ----cccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCC--CCChhHHHHHHHHhCCCCc--cCC
Q 026820 74 ----LDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQP--YVNASGAVLQRLLQGSKDT--QEH 143 (232)
Q Consensus 74 ----~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~--~~~ 143 (232)
...+..+.++|+.+|..+|++++.+.+++ ++.++++||+.+|||...+ .......++..+.++.... .++
T Consensus 162 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~ 241 (342)
T d1y1pa1 162 KTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM 241 (342)
T ss_dssp HHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC
T ss_pred ccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCc
Confidence 11123334689999999999999998765 5778999999999986433 2235677888888887665 455
Q ss_pred cccCceeHHhHHHHHHHhhcCCCCCce-EEEecCcccHHHHHHHHHhhCCCCCCccceec
Q 026820 144 YWLGAVHVKDVAKAQVLLFETSAASGR-YLCTNGIYQFAEFAEKVSKLFPEYPIHRFVCV 202 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~~~~s~~el~~~i~~~~p~~~~~~~~~~ 202 (232)
+.++|+|++|+|+++..+++++...+. |+++++.+++.|+++.+++.+|...+|.++..
T Consensus 242 ~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~ 301 (342)
T d1y1pa1 242 PPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPD 301 (342)
T ss_dssp CSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCC
T ss_pred cceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCc
Confidence 778999999999999999988887775 56677889999999999999987777655543
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.92 E-value=1.9e-24 Score=171.33 Aligned_cols=180 Identities=14% Similarity=0.090 Sum_probs=141.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCC-EEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVR-RVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
++++|+|+..+.......+..++..|+.|+.+++++|++.+++ ++++.||. ++|+... ....+|+++..|.
T Consensus 74 ~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~-~~~~~~~---~~~~~E~~~~~p~---- 145 (321)
T d1rpna_ 74 QEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTS-EMFGLIQ---AERQDENTPFYPR---- 145 (321)
T ss_dssp SEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEG-GGGCSCS---SSSBCTTSCCCCC----
T ss_pred cccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccch-hhcCccc---CCCCCCCCCcccc----
Confidence 4678888776654555667888999999999999999998755 67776664 7777655 4457898888777
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC--ChhHHHHHHHHhCCCCc--cCC--cccCceeHHh
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV--NASGAVLQRLLQGSKDT--QEH--YWLGAVHVKD 153 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~--~~~--~~~~~i~v~D 153 (232)
+.|+.+|..+|+++..+.++.+++++++||+++|||...... +.+..++.+...++... +++ +.++|+|++|
T Consensus 146 --~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D 223 (321)
T d1rpna_ 146 --SPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGD 223 (321)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHH
T ss_pred --ChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHH
Confidence 599999999999999999889999999999999999755432 13344555555555433 444 7789999999
Q ss_pred HHHHHHHhhcCCCCCceE-EEecCcccHHHHHHHHHhhC
Q 026820 154 VAKAQVLLFETSAASGRY-LCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 154 ~a~~~~~~~~~~~~~~~~-~~~~~~~s~~el~~~i~~~~ 191 (232)
+|+++..++.++.. +.| +++++..++.++++.+.+.+
T Consensus 224 ~~~~~~~~~~~~~~-~~~ni~~~~~~s~~~~~~~~~~~~ 261 (321)
T d1rpna_ 224 YVEAMWLMLQQDKA-DDYVVATGVTTTVRDMCQIAFEHV 261 (321)
T ss_dssp HHHHHHHHHHSSSC-CCEEECCSCEEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCc-CCceecccccceehhhhHHHHHHh
Confidence 99999999987754 445 55678899999999999887
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.92 E-value=1.6e-24 Score=173.60 Aligned_cols=183 Identities=16% Similarity=0.192 Sum_probs=146.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCC---------CCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNW---------PQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~---------~~~~~~~E~~~ 71 (232)
|.|+|+|+.........++.+.++.|+.|+.+++++|...+. ++|++||. .+||.... .+....+|+++
T Consensus 75 ~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~-~vyg~~~~~~~~~~~~~~~~~~~~e~~~ 152 (346)
T d1oc2a_ 75 DAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTD-EVYGDLPLREDLPGHGEGPGEKFTAETN 152 (346)
T ss_dssp SEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEG-GGGCCBCCGGGSTTTTCSTTSSBCTTSC
T ss_pred hhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccc-eEecccCccccccccccCcccccccCCC
Confidence 578999988765333345678899999999999999999985 78999987 67874321 11234555555
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cC--CcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QE--HYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~ 148 (232)
..|. +.|+.+|..+|.+++.+++..+++++++||+.+|||..... ..+..++.....+.++. ++ ++.++|
T Consensus 153 ~~p~------s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i~~~g~~~r~~ 225 (346)
T d1oc2a_ 153 YNPS------SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDW 225 (346)
T ss_dssp CCCC------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEEC
T ss_pred CCCC------CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeEeCCCCccccc
Confidence 5554 69999999999999999988899999999999999976554 46677777777887776 44 478899
Q ss_pred eeHHhHHHHHHHhhcCCCCCceEE-EecCcccHHHHHHHHHhhCC
Q 026820 149 VHVKDVAKAQVLLFETSAASGRYL-CTNGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~~~~~~-~~~~~~s~~el~~~i~~~~p 192 (232)
+|++|+|++++.++.++...+.|+ ++++..++.++++.+.+.++
T Consensus 226 i~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 270 (346)
T d1oc2a_ 226 IHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMG 270 (346)
T ss_dssp EEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTT
T ss_pred cchhhHHHHHHHHHhhcccCccccccccccccchHHHHHHHHHhC
Confidence 999999999999998888777764 56788999999999998873
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.92 E-value=5.2e-24 Score=171.65 Aligned_cols=186 Identities=15% Similarity=0.089 Sum_probs=137.0
Q ss_pred CeEEEeecCCCC-CCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCC-Cccccc
Q 026820 1 MGVFHLASPNTL-DDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT-DLDFCK 78 (232)
Q Consensus 1 D~Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~-~~~~~~ 78 (232)
|+|||+|+.... ......+......|+.++.+++++|++.++++||++||. .+|+.... .+.+|+... ....+.
T Consensus 81 d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~-~~~~~~~~---~~~~~~~~~~~e~~~~ 156 (363)
T d2c5aa1 81 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSA-CIYPEFKQ---LETTNVSLKESDAWPA 156 (363)
T ss_dssp SEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEG-GGSCGGGS---SSSSSCEECGGGGSSB
T ss_pred CeEeecccccccccccccccccccccccchhhHHHHhHHhhCcccccccccc-cccccccc---ccccccccccccCCcC
Confidence 789999988765 222456788899999999999999999999999999997 66765432 123332211 111122
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCC---hhH-HHHHHHHhCCCCc-cCC--cccCceeH
Q 026820 79 SHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVN---ASG-AVLQRLLQGSKDT-QEH--YWLGAVHV 151 (232)
Q Consensus 79 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~---~~~-~~~~~~~~~~~~~-~~~--~~~~~i~v 151 (232)
.+.+.|+.+|..+|++++.+.+..+++++++||+++||+....... ... ..........+.. +++ +.++|+|+
T Consensus 157 ~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v 236 (363)
T d2c5aa1 157 EPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFI 236 (363)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeeh
Confidence 3346999999999999999998889999999999999987654221 222 2223333333333 444 68899999
Q ss_pred HhHHHHHHHhhcCCCCCceEEE-ecCcccHHHHHHHHHhhC
Q 026820 152 KDVAKAQVLLFETSAASGRYLC-TNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~ 191 (232)
+|+++++..+++.. ..+.|++ ++..+++.|+++.+.+.+
T Consensus 237 ~D~~~~~~~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~ 276 (363)
T d2c5aa1 237 DECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFE 276 (363)
T ss_dssp HHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHhCC-CCCeEEEecCCcccHHHHHHHHHHHh
Confidence 99999999988765 4556755 678899999999999887
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=3.6e-24 Score=171.47 Aligned_cols=181 Identities=17% Similarity=0.054 Sum_probs=139.5
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCC---CEEEEecccceeccCCCCCCCCccCCCCCCCcccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGV---RRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFC 77 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~---~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~ 77 (232)
|+|+|+++..+.......+..++++|+.||.+++++|++.++ ++|||+||+ ++||... ..+++|+++..|.
T Consensus 81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~-~vyg~~~---~~~~~E~~~~~P~-- 154 (347)
T d1t2aa_ 81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTS-ELYGKVQ---EIPQKETTPFYPR-- 154 (347)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEG-GGTCSCS---SSSBCTTSCCCCC--
T ss_pred ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecch-heecCCC---CCCCCCCCCCCCC--
Confidence 478999987654223345667789999999999999998764 489999997 7898654 5568999988776
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCC--hh-HHHHHHHHhCCCCc-cCC--cccCceeH
Q 026820 78 KSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVN--AS-GAVLQRLLQGSKDT-QEH--YWLGAVHV 151 (232)
Q Consensus 78 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~--~~-~~~~~~~~~~~~~~-~~~--~~~~~i~v 151 (232)
++|+.||..+|+++..+.++.+++++++||+.+|||....... .. ..++.....+.+.. +++ +.++|+|+
T Consensus 155 ----~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v 230 (347)
T d1t2aa_ 155 ----SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA 230 (347)
T ss_dssp ----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEH
T ss_pred ----CHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEe
Confidence 5999999999999999988899999999999999997554321 11 22333334444444 444 67899999
Q ss_pred HhHHHHHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhC
Q 026820 152 KDVAKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 152 ~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~ 191 (232)
+|+++++..++.+......+...+...++.+..+.+....
T Consensus 231 ~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (347)
T d1t2aa_ 231 KDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHI 270 (347)
T ss_dssp HHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHT
T ss_pred cHHHHHHHHHhhcCCCccceeccccccccchhhhhhhhhh
Confidence 9999999999988754333455677799999999887766
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=9e-24 Score=167.02 Aligned_cols=186 Identities=15% Similarity=0.136 Sum_probs=137.8
Q ss_pred CeEEEeecCCCC-CCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTL-DDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~-~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|.|+|+|+.... ......+.++...|+.+|.+|+++|.+.++++|||+||+ .+||... ..+++|+.+..... .+
T Consensus 56 d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~-~vyg~~~---~~~~~E~~~~~~~~-~~ 130 (315)
T d1e6ua_ 56 DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS-CIYPKLA---KQPMAESELLQGTL-EP 130 (315)
T ss_dssp SEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCG-GGSCTTC---CSSBCGGGTTSSCC-CG
T ss_pred CEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCc-eEcCCCC---CCCccCCccccCCC-CC
Confidence 789999987654 111234567788999999999999999999999999997 6787655 34577776554332 33
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCC---hh-----HHHHHHHHhCCCCc-cCC--cccCc
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVN---AS-----GAVLQRLLQGSKDT-QEH--YWLGA 148 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~---~~-----~~~~~~~~~~~~~~-~~~--~~~~~ 148 (232)
+.++|+.+|..+|+++..+.++.+++++++||+++|||....... .. .........+..+. .++ ..+++
T Consensus 131 ~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ 210 (315)
T d1e6ua_ 131 TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREF 210 (315)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEE
Confidence 446899999999999999998889999999999999997654321 11 12223334454444 444 67899
Q ss_pred eeHHhHHHHHHHhhcCCCC---------CceEEE-ecCcccHHHHHHHHHhhC
Q 026820 149 VHVKDVAKAQVLLFETSAA---------SGRYLC-TNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~---------~~~~~~-~~~~~s~~el~~~i~~~~ 191 (232)
+|++|++.++..++..... .+.++. .+...++.++++.+.+.+
T Consensus 211 ~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~ 263 (315)
T d1e6ua_ 211 LHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVV 263 (315)
T ss_dssp EEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHh
Confidence 9999999999998865321 123544 577799999999999886
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=1.2e-23 Score=167.97 Aligned_cols=181 Identities=17% Similarity=0.132 Sum_probs=132.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCC-CCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW-TDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~-~~~~~~~~ 79 (232)
|+|||+||..+......++.+.++.|+.||.+|+++|++.+++++|++||. ++|+... ..+..|+.+ ..|.
T Consensus 75 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~-~vy~~~~---~~~~~e~~~~~~p~---- 146 (338)
T d1udca_ 75 DTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSA-TVYGDQP---KIPYVESFPTGTPQ---- 146 (338)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEG-GGGCSCC---SSSBCTTSCCCCCS----
T ss_pred CEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcc-eEEcccc---ccccccccccCCCc----
Confidence 799999998654223345678999999999999999999999999999997 6676544 223444443 3344
Q ss_pred cchhHHHHHHHHHHHHHHHHHH-cCCcEEEEcCCCeeCCCCCCCC--------C-hhHHHHHHHHhCCC-Cc-c------
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEK-NGTDVVAIHPATSLGPFPQPYV--------N-ASGAVLQRLLQGSK-DT-Q------ 141 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~i~G~~~~~~~--------~-~~~~~~~~~~~~~~-~~-~------ 141 (232)
++|+.+|..+|+++..+..+ .+++++++|++++||+...... . .+..++.....++. +. +
T Consensus 147 --~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~ 224 (338)
T d1udca_ 147 --SPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT 224 (338)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSS
T ss_pred --chHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCccc
Confidence 69999999999999876655 4899999999999998654221 1 23344444433332 22 2
Q ss_pred --CCcccCceeHHhHHHHHHHhhcCCCCCc---eEEEe-cCcccHHHHHHHHHhhC
Q 026820 142 --EHYWLGAVHVKDVAKAQVLLFETSAASG---RYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 142 --~~~~~~~i~v~D~a~~~~~~~~~~~~~~---~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
+.+.+||+|++|++.++..+........ .||++ ++++|+.|+++.+.+.+
T Consensus 225 ~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~ 280 (338)
T d1udca_ 225 EDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKAC 280 (338)
T ss_dssp TTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHH
T ss_pred CCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHH
Confidence 3367899999999998888765433222 57775 57799999999999887
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.90 E-value=1.2e-23 Score=171.15 Aligned_cols=190 Identities=19% Similarity=0.184 Sum_probs=137.3
Q ss_pred CeEEEeecCCCCCCC---CCchhhhHHHHHHHHHHHHHHHHHcCCC-EEEEecccceeccCCCCCCCC---ccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDP---KDPEKELLIPAVQGTLNVLEAAKKFGVR-RVVLTSSISSIVPNPNWPQGK---VIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~---~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~~i~~Ss~~~~~~~~~~~~~~---~~~E~~~~~ 73 (232)
|+|||+||......+ ...+..++..|+.||.+++++|++.+++ ++++.||+ ++|+........ ..+|+....
T Consensus 92 d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~-~~~~~~~~~~~~~~~~~~~~~~~~ 170 (393)
T d1i24a_ 92 DSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTM-GEYGTPNIDIEEGYITITHNGRTD 170 (393)
T ss_dssp SEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCG-GGGCCCSSCBCSSEEEEEETTEEE
T ss_pred hheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccc-cccccccccccccccccccccccc
Confidence 789999998654111 1224567899999999999999998765 56666665 767654422110 111111100
Q ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC----------------CChhHHHHHHHHhC
Q 026820 74 -LDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY----------------VNASGAVLQRLLQG 136 (232)
Q Consensus 74 -~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~----------------~~~~~~~~~~~~~~ 136 (232)
...+..+.+.|+.+|..+|.++..+.++.+++++++||+.+||+..... ...+..++.+...+
T Consensus 171 ~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 250 (393)
T d1i24a_ 171 TLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVG 250 (393)
T ss_dssp EEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHT
T ss_pred ccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccchhhhhHHhhcC
Confidence 0112233468999999999999999999999999999999999875431 12456778888888
Q ss_pred CCCc-cCC--cccCceeHHhHHHHHHHhhcCCCCCceE---EEecCcccHHHHHHHHHhhC
Q 026820 137 SKDT-QEH--YWLGAVHVKDVAKAQVLLFETSAASGRY---LCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 137 ~~~~-~~~--~~~~~i~v~D~a~~~~~~~~~~~~~~~~---~~~~~~~s~~el~~~i~~~~ 191 (232)
.++. +|+ +.|||+|++|+++++..++++....+.+ +.+++.+|+.|+++.+++..
T Consensus 251 ~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~ 311 (393)
T d1i24a_ 251 HPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAG 311 (393)
T ss_dssp CCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHH
T ss_pred CeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHH
Confidence 8877 555 6789999999999999999888777642 34557799999999988763
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=2.3e-23 Score=166.49 Aligned_cols=186 Identities=18% Similarity=0.194 Sum_probs=142.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccc-ccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF-CKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~-~~~ 79 (232)
|+|||+|+..........+...+..|+.|+.+++++|.+.++ ++++.||+ .+|+.... ...+|..+..+.. ...
T Consensus 69 d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~-~~~~~~~~---~~~~~~~~~~~~~~~~~ 143 (342)
T d2blla1 69 DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTS-EVYGMCSD---KYFDEDHSNLIVGPVNK 143 (342)
T ss_dssp SEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCG-GGGBTCCC---SSBCTTTCCCBCCCTTC
T ss_pred CccccccccccccccccCCccccccccccccccccccccccc-cccccccc-cccccccc---cccccccccccccccCC
Confidence 799999998765333344568899999999999999999986 56777876 66776542 2344443333221 123
Q ss_pred cchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC-------CChhHHHHHHHHhCCCCc-cC--CcccCce
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY-------VNASGAVLQRLLQGSKDT-QE--HYWLGAV 149 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~~-~~--~~~~~~i 149 (232)
+.+.|+.+|..+|+++..+.++.+++++++|++.+||+..... ......++.+++.|+++. .+ ++.++|+
T Consensus 144 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i 223 (342)
T d2blla1 144 PRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFT 223 (342)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECE
T ss_pred CcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeec
Confidence 4468999999999999999999999999999999999864432 124567888889998877 44 4788999
Q ss_pred eHHhHHHHHHHhhcCCC--CCc-eEEEe-cCc-ccHHHHHHHHHhhC
Q 026820 150 HVKDVAKAQVLLFETSA--ASG-RYLCT-NGI-YQFAEFAEKVSKLF 191 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~--~~~-~~~~~-~~~-~s~~el~~~i~~~~ 191 (232)
|++|+|+++..+++++. ..+ .||++ ++. +|+.|+++.+.+.+
T Consensus 224 ~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~ 270 (342)
T d2blla1 224 DIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASF 270 (342)
T ss_dssp EHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHH
T ss_pred ccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHh
Confidence 99999999999998753 334 68774 554 89999999998775
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.89 E-value=6.5e-23 Score=163.54 Aligned_cols=180 Identities=15% Similarity=0.047 Sum_probs=138.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc-----CCCEEEEecccceeccCCCCCCCCccCCCCCCCcc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-----GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLD 75 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~ 75 (232)
|+|||+|+..........+......|+.++.++++++++. ...++++.||. .+++... ..++|+++..|.
T Consensus 81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~-~~~~~~~----~~~~E~~~~~p~ 155 (339)
T d1n7ha_ 81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSS-EMFGSTP----PPQSETTPFHPR 155 (339)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEG-GGGTTSC----SSBCTTSCCCCC
T ss_pred chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccc-eecccCC----CCCCCCCCCCCc
Confidence 7999999986652233456788899999999999998754 23467777765 5554432 348999988776
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC--ChhHHHHHHHHhCCCCc--cCC--cccCce
Q 026820 76 FCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV--NASGAVLQRLLQGSKDT--QEH--YWLGAV 149 (232)
Q Consensus 76 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~--~~~--~~~~~i 149 (232)
+.|+.+|..+|+++..+.+.++++++++||+++|||...... ..+...+.....+.... .|+ +.++++
T Consensus 156 ------~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~ 229 (339)
T d1n7ha_ 156 ------SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWG 229 (339)
T ss_dssp ------SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECE
T ss_pred ------chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccce
Confidence 599999999999999999989999999999999999755432 12233333444443332 444 788999
Q ss_pred eHHhHHHHHHHhhcCCCCCceEEEecCcccHHHHHHHHHhhC
Q 026820 150 HVKDVAKAQVLLFETSAASGRYLCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~ 191 (232)
|++|+++++..++.++...+.++..+...+..++++.+.+.+
T Consensus 230 ~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 271 (339)
T d1n7ha_ 230 FAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYL 271 (339)
T ss_dssp EHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHT
T ss_pred eeehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhh
Confidence 999999999999998866556677788899999999999988
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.89 E-value=1.3e-22 Score=164.64 Aligned_cols=184 Identities=20% Similarity=0.221 Sum_probs=136.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCC----CCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWP----QGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~----~~~~~~E~~~~~~~~ 76 (232)
|+|||+|+..........+......|+.++.++++++++.++++++++||. .+|+..... ...++.|+.+..|.
T Consensus 95 d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~~~e~~~~~p~- 172 (383)
T d1gy8a_ 95 DAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSA-AIFGNPTMGSVSTNAEPIDINAKKSPE- 172 (383)
T ss_dssp CEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG-GGTBSCCC-----CCCCBCTTSCCBCS-
T ss_pred ehhhcccccccccccccccccccccccccccccchhhhccCCccccccccc-ccccccccccccccccccccccCCCCC-
Confidence 799999998765333345677889999999999999999999999999987 556543321 12345566555555
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC--------ChhHHHHHHHHh-------------
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV--------NASGAVLQRLLQ------------- 135 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~--------~~~~~~~~~~~~------------- 135 (232)
++|+.+|..+|+++..+.+.++++++++|++++|||...... ..+..++.+++.
T Consensus 173 -----~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~ 247 (383)
T d1gy8a_ 173 -----SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHED 247 (383)
T ss_dssp -----SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--------
T ss_pred -----CHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhh
Confidence 699999999999999999889999999999999999876532 122333333321
Q ss_pred ---CCCCc---------cCCcccCceeHHhHHHHHHHhhcCCC--------CC-ceEEE-ecCcccHHHHHHHHHhhC
Q 026820 136 ---GSKDT---------QEHYWLGAVHVKDVAKAQVLLFETSA--------AS-GRYLC-TNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 136 ---~~~~~---------~~~~~~~~i~v~D~a~~~~~~~~~~~--------~~-~~~~~-~~~~~s~~el~~~i~~~~ 191 (232)
+.++. .|.+.|+|+|++|+|++++.+++... .. +.||+ +++++++.|+++.+.+.+
T Consensus 248 ~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~ 325 (383)
T d1gy8a_ 248 ASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTT 325 (383)
T ss_dssp ---CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred hhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHHHHHh
Confidence 11111 13456899999999999999875421 11 25777 578899999999999987
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.88 E-value=1.9e-22 Score=161.55 Aligned_cols=184 Identities=16% Similarity=0.149 Sum_probs=134.1
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCC-CCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPN-WPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~-~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|||+||..........+..+..+|+.++.+|+++|++.+++++|++||+ .+||... .+...+++|+.+..|.
T Consensus 76 d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~-~vyg~~~~~~~~~~~~e~~~~~p~---- 150 (347)
T d1z45a2 76 DSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSA-TVYGDATRFPNMIPIPEECPLGPT---- 150 (347)
T ss_dssp CEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEG-GGGCCGGGSTTCCSBCTTSCCCCC----
T ss_pred CEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecce-eeecCcccCCCCCccccccCCCCC----
Confidence 799999998764333445678899999999999999999999999999998 6677543 2335668888877776
Q ss_pred cchhHHHHHHHHHHHHHHHHHH--cCCcEEEEcCCCeeCCCCCCC--------CChhHHHHHHHHhC--CCCc-cCC---
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEK--NGTDVVAIHPATSLGPFPQPY--------VNASGAVLQRLLQG--SKDT-QEH--- 143 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~--~~~~~~ilR~~~i~G~~~~~~--------~~~~~~~~~~~~~~--~~~~-~~~--- 143 (232)
++|+.+|..+|+++..+.+. .+++++++|++.+||+..... ...+...+.+...+ .++. +++
T Consensus 151 --~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~ 228 (347)
T d1z45a2 151 --NPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYD 228 (347)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC-----
T ss_pred --ChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCcc
Confidence 59999999999999988754 488999999999999754321 11233333333332 2332 443
Q ss_pred -----cccCceeHHhHHHHHHHhhcCC----CC---CceEEE-ecCcccHHHHHHHHHhhC
Q 026820 144 -----YWLGAVHVKDVAKAQVLLFETS----AA---SGRYLC-TNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 144 -----~~~~~i~v~D~a~~~~~~~~~~----~~---~~~~~~-~~~~~s~~el~~~i~~~~ 191 (232)
..+|++++.|++.++..++... .. ...||+ +++++++.|+++.+.+.+
T Consensus 229 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~ 289 (347)
T d1z45a2 229 SRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKAS 289 (347)
T ss_dssp -CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred ccCCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHH
Confidence 3567888888888888776531 11 124777 478899999999999887
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=2.1e-21 Score=155.21 Aligned_cols=181 Identities=19% Similarity=0.217 Sum_probs=130.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCC-CCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETS-WTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~-~~~~~~~~~ 79 (232)
|+|+|+||..+.......+.+.++.|+.++.+++++|++.+++++|++||+ .+|+..... ...++. ...+
T Consensus 83 ~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~-~~~~~~~~~---~~~~~~~~~~~----- 153 (346)
T d1ek6a_ 83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSA-TVYGNPQYL---PLDEAHPTGGC----- 153 (346)
T ss_dssp EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG-GGGCSCSSS---SBCTTSCCCCC-----
T ss_pred ccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccc-eeeeccccc---ccccccccccc-----
Confidence 478999998765333445778899999999999999999999999999997 666665432 122222 2222
Q ss_pred cchhHHHHHHHHHHHHHHHHHH-cCCcEEEEcCCCeeCCCCCCC--------C-ChhHHHHHHHHh-CCCCc--------
Q 026820 80 HKIWYSMSKTLAEKAAWEFAEK-NGTDVVAIHPATSLGPFPQPY--------V-NASGAVLQRLLQ-GSKDT-------- 140 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ilR~~~i~G~~~~~~--------~-~~~~~~~~~~~~-~~~~~-------- 140 (232)
.++|+.+|..+|+.+..+.+. .+++.+++|++.+||+..... . ..+..++..... +.++.
T Consensus 154 -~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~ 232 (346)
T d1ek6a_ 154 -TNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDT 232 (346)
T ss_dssp -SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred -CChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccC
Confidence 268999999999999988765 499999999999999864321 1 123333333332 22211
Q ss_pred -cCCcccCceeHHhHHHHHHHhhcCCCC--Cc-eEEEe-cCcccHHHHHHHHHhhC
Q 026820 141 -QEHYWLGAVHVKDVAKAQVLLFETSAA--SG-RYLCT-NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 141 -~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~-~~~~~-~~~~s~~el~~~i~~~~ 191 (232)
.+.+.+||+|++|+|.++..++..... .+ .||++ ++.+++.|+++.+.+.+
T Consensus 233 ~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~ 288 (346)
T d1ek6a_ 233 EDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKAS 288 (346)
T ss_dssp SSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHH
T ss_pred CCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHh
Confidence 233578999999999999887644322 22 58765 67799999999999997
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.81 E-value=7e-20 Score=141.92 Aligned_cols=171 Identities=15% Similarity=0.098 Sum_probs=137.7
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||+|+..........+......|+..+.++.+.+...+. .+++.||. .+|+... ..+.+|+++..+.
T Consensus 54 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~-~v~~~~~---~~~~~e~~~~~~~----- 123 (281)
T d1vl0a_ 54 NVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTD-YVFDGEA---KEPITEFDEVNPQ----- 123 (281)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEG-GGSCSCC---SSCBCTTSCCCCC-----
T ss_pred CEEEeeccccccccccccchhhcccccccccccccccccccc-cccccccc-eeeeccc---cccccccccccch-----
Confidence 789999998765333445677788899999999999888774 67777775 6666655 4458888887776
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~ 159 (232)
+.|+.+|..+|+++.+ .+.+.+|+||+++||++. +....++..+..+.+.. .+++.++++|++|+++++.
T Consensus 124 -~~~~~~k~~~e~~~~~----~~~~~~i~R~~~vyG~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~ 194 (281)
T d1vl0a_ 124 -SAYGKTKLEGENFVKA----LNPKYYIVRTAWLYGDGN----NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVL 194 (281)
T ss_dssp -SHHHHHHHHHHHHHHH----HCSSEEEEEECSEESSSS----CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHH
T ss_pred -hhhhhhhhHHHHHHHH----hCCCccccceeEEeCCCc----ccccchhhhhccCCceeecCCceeccchhhhhhhhhh
Confidence 4899999999998654 488999999999999964 35667777777777766 7888999999999999999
Q ss_pred HhhcCCCCCceE-EEecCcccHHHHHHHHHhhC
Q 026820 160 LLFETSAASGRY-LCTNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 160 ~~~~~~~~~~~~-~~~~~~~s~~el~~~i~~~~ 191 (232)
.++++.. .|.| +.+++.+|+.|+++.+++.+
T Consensus 195 ~~~~~~~-~g~~~~~~~~~~s~~e~~~~i~~~~ 226 (281)
T d1vl0a_ 195 KVIDEKN-YGTFHCTCKGICSWYDFAVEIFRLT 226 (281)
T ss_dssp HHHHHTC-CEEEECCCBSCEEHHHHHHHHHHHH
T ss_pred hhhhhcc-cCceeEeCCCccchHHHHHHHHHHh
Confidence 9998765 4666 45678899999999999987
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.81 E-value=1.9e-19 Score=140.88 Aligned_cols=178 Identities=16% Similarity=0.149 Sum_probs=124.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
++|+|+|+.... ...+.......|+.++.++++++.+.+++ +++.||..++++ .. .....|+.+..+.
T Consensus 70 ~~i~~~aa~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~-~~---~~~~~~~~~~~~~----- 137 (307)
T d1eq2a_ 70 EAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGG-RT---SDFIESREYEKPL----- 137 (307)
T ss_dssp CEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTT-CC---SCBCSSGGGCCCS-----
T ss_pred hhhhhhcccccc--ccccccccccccccccccccccccccccc-cccccccccccc-cc---ccccccccccccc-----
Confidence 578899986554 34456778888999999999999999985 666666534443 33 2224444443443
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCC---CChhHHHHHHHHhCCCCc--cCC--cccCceeHHh
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPY---VNASGAVLQRLLQGSKDT--QEH--YWLGAVHVKD 153 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~--~~~--~~~~~i~v~D 153 (232)
+.|+.+|..+|.++..+.++.+++++++|++.+|||..... ......+...+..++... .++ ..++++|++|
T Consensus 138 -~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d 216 (307)
T d1eq2a_ 138 -NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGD 216 (307)
T ss_dssp -SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHH
T ss_pred -cccccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeeccc
Confidence 69999999999999999999999999999999999976432 123345556666665544 344 5789999999
Q ss_pred HHHHHHHhhcCCCCCceEEE-ecCcccHHHHHHHHHhhCC
Q 026820 154 VAKAQVLLFETSAASGRYLC-TNGIYQFAEFAEKVSKLFP 192 (232)
Q Consensus 154 ~a~~~~~~~~~~~~~~~~~~-~~~~~s~~el~~~i~~~~p 192 (232)
++.++..++.+.. .+.|++ +++.++++|+++.+.+..+
T Consensus 217 ~~~~~~~~~~~~~-~~~~~~~~~~~~si~~i~~~i~~~~~ 255 (307)
T d1eq2a_ 217 VADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHK 255 (307)
T ss_dssp HHHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC-----
T ss_pred HHHHHHHHhhhcc-ccccccccccchhHHHHHHHHHHhcC
Confidence 9999999987654 355655 6888999999999987653
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.79 E-value=5e-19 Score=140.41 Aligned_cols=185 Identities=17% Similarity=0.158 Sum_probs=133.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCC-------------CccC
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQG-------------KVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~-------------~~~~ 67 (232)
|+|||+|+.........++....++|+.||.+|+++|.+.+++++|+.||.+++++.....+. ....
T Consensus 74 d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T d1orra_ 74 DSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYD 153 (338)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBC
T ss_pred ceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcc
Confidence 799999999765222335678899999999999999999988888887877676665442210 1112
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCC--ChhHHHHHHHHh-----CCCCc
Q 026820 68 ETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYV--NASGAVLQRLLQ-----GSKDT 140 (232)
Q Consensus 68 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~-----~~~~~ 140 (232)
+.++. .+.+.|+.+|...|.++..+.+..+....++|++.+||+...... .....++..++. ++++.
T Consensus 154 ~~~~~------~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (338)
T d1orra_ 154 ESTQL------DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFT 227 (338)
T ss_dssp TTSCC------CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEE
T ss_pred cCCcc------ccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceE
Confidence 22222 234699999999999999998889999999999999987654321 233444444432 44444
Q ss_pred -cCC--cccCceeHHhHHHHHHHhhcCCC-CCc-eEEEe---cCcccHHHHHHHHHhhC
Q 026820 141 -QEH--YWLGAVHVKDVAKAQVLLFETSA-ASG-RYLCT---NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 141 -~~~--~~~~~i~v~D~a~~~~~~~~~~~-~~~-~~~~~---~~~~s~~el~~~i~~~~ 191 (232)
+++ +.++|+|++|++++++.++++.. ..+ .+++. +..+++.|+++.+.+.+
T Consensus 228 ~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~ 286 (338)
T d1orra_ 228 ISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYC 286 (338)
T ss_dssp EESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHH
T ss_pred EeCCCceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHH
Confidence 444 67899999999999999987643 334 56652 45689999999999886
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.76 E-value=1.9e-18 Score=138.16 Aligned_cols=182 Identities=21% Similarity=0.170 Sum_probs=134.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcC-CCEEEEecccceeccCCCCCCCCccCCCCCCCcccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKS 79 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~ 79 (232)
|+|+|+|+..........+......|+.++.+++++|.+.+ .+.+++.||. .+++.... ..+.+|+.+..|.
T Consensus 81 ~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~-~~~~~~~~--~~~~~~~~~~~p~---- 153 (356)
T d1rkxa_ 81 EIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSD-KCYDNKEW--IWGYRENEAMGGY---- 153 (356)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCG-GGBCCCCS--SSCBCTTSCBCCS----
T ss_pred hhhhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccccc-cccccccc--ccccccccccCCC----
Confidence 68999999865433334578899999999999999999875 4455555554 54444332 4456777766665
Q ss_pred cchhHHHHHHHHHHHHHHHHH---------HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc--cCCcccCc
Q 026820 80 HKIWYSMSKTLAEKAAWEFAE---------KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT--QEHYWLGA 148 (232)
Q Consensus 80 ~~~~Y~~sK~~~E~~~~~~~~---------~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 148 (232)
++|+.+|...|..+..+.. ..++.++++||+++|||++......+..++..+..+.++. .+++.+++
T Consensus 154 --~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 231 (356)
T d1rkxa_ 154 --DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW 231 (356)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred --CccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccc
Confidence 5999999999999887664 3477899999999999987665456666777776666655 44478899
Q ss_pred eeHHhHHHHHHHhhcCCCCCc-----eE--EE-ecCcccHHHHHHHHHhhC
Q 026820 149 VHVKDVAKAQVLLFETSAASG-----RY--LC-TNGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~~~-----~~--~~-~~~~~s~~el~~~i~~~~ 191 (232)
+|++|++.++..++.+....+ .. .. .+...++.++++.+.+.+
T Consensus 232 ~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 282 (356)
T d1rkxa_ 232 QHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYW 282 (356)
T ss_dssp EETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHH
T ss_pred cccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHh
Confidence 999999999999887644322 11 22 245689999999999886
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.74 E-value=2.8e-17 Score=127.87 Aligned_cols=172 Identities=15% Similarity=0.091 Sum_probs=129.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+||||||..........+...+..|+.++.+|+++|++.+. +++++||. .+|+... +.+.+|+++..|.
T Consensus 56 D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~-~~~~~~~---~~~~~E~~~~~p~----- 125 (298)
T d1n2sa_ 56 DVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTD-YVFPGTG---DIPWQETDATSPL----- 125 (298)
T ss_dssp SEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEG-GGSCCCT---TCCBCTTSCCCCS-----
T ss_pred CEEEEecccccccccccCccccccccccccccchhhhhcccc-cccccccc-ccccCCC---CCCCccccccCCC-----
Confidence 799999998766555677888999999999999999999885 78888886 5555444 5568999988877
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~~ 159 (232)
+.|+.+|..+|..+..+ .....++|++..++.... .....+...+..+..+. .++..++++|++|+++++.
T Consensus 126 -~~y~~~k~~~e~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 197 (298)
T d1n2sa_ 126 -NVYGKTKLAGEKALQDN----CPKHLIFRTSWVYAGKGN---NFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTA 197 (298)
T ss_dssp -SHHHHHHHHHHHHHHHH----CSSEEEEEECSEECSSSC---CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHH
T ss_pred -chHhhhhhhhhhhHHhh----hcccccccccceeeccCC---ccchhhhhhhcccceeecccceeecccccchHHHHHH
Confidence 59999999999987654 455677777777754322 23334444455555554 5667789999999999998
Q ss_pred HhhcC----CCCCceEEEe-cCcccHHHHHHHHHhh
Q 026820 160 LLFET----SAASGRYLCT-NGIYQFAEFAEKVSKL 190 (232)
Q Consensus 160 ~~~~~----~~~~~~~~~~-~~~~s~~el~~~i~~~ 190 (232)
.++.. +...+.|+++ ++.+++.++++.+.+.
T Consensus 198 ~~i~~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~ 233 (298)
T d1n2sa_ 198 HAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDE 233 (298)
T ss_dssp HHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHH
T ss_pred HHHhhhhccccccccccccCCCceecHHHHHHHHhh
Confidence 87753 3344578765 5679999999988764
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=1.4e-17 Score=125.57 Aligned_cols=141 Identities=17% Similarity=0.043 Sum_probs=104.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||++|.... ..+...+.+.|+.++.+++++|.+.++++||++||.++ +..+.
T Consensus 82 d~vi~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~-~~~~~--------------------- 136 (232)
T d2bkaa1 82 DVGFCCLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA-DKSSN--------------------- 136 (232)
T ss_dssp SEEEECCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC-CTTCS---------------------
T ss_pred cccccccccccc---ccchhhhhhhcccccceeeecccccCccccccCCcccc-ccCcc---------------------
Confidence 789999987643 34567888999999999999999999999999999733 22211
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCc-EEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTD-VVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQV 159 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~-~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~ 159 (232)
+.|+.+|..+|+.+.+ .+++ ++|+||+.+||+.... .........+....+ .+......||++|+|++++
T Consensus 137 -~~Y~~~K~~~E~~l~~----~~~~~~~IlRP~~i~G~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~I~~~dvA~a~i 207 (232)
T d2bkaa1 137 -FLYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFGSLP--DSWASGHSVPVVTVVRAML 207 (232)
T ss_dssp -SHHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGG--SHHHHHHHHHHCSCC--TTGGGGTEEEHHHHHHHHH
T ss_pred -chhHHHHHHhhhcccc----ccccceEEecCceeecCCCcC--cHHHHHHHHHhhccC--CcccCCCeEEHHHHHHHHH
Confidence 4899999999998654 3665 8999999999986543 233333344433322 1223445799999999999
Q ss_pred HhhcCCCCCceEEEec
Q 026820 160 LLFETSAASGRYLCTN 175 (232)
Q Consensus 160 ~~~~~~~~~~~~~~~~ 175 (232)
.++..+...+.+++++
T Consensus 208 ~~~~~~~~~~~~i~~~ 223 (232)
T d2bkaa1 208 NNVVRPRDKQMELLEN 223 (232)
T ss_dssp HHHTSCCCSSEEEEEH
T ss_pred HHHhcCccCCeEEEcH
Confidence 9988877666676665
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.65 E-value=2.2e-16 Score=117.26 Aligned_cols=130 Identities=17% Similarity=0.144 Sum_probs=93.9
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+||||+|.... .......+.+.|+.++.+++++|++.+++++|++||.++ ++...
T Consensus 64 d~vi~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~-~~~~~--------------------- 119 (212)
T d2a35a1 64 DTAFCCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGA-DAKSS--------------------- 119 (212)
T ss_dssp SEEEECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC-CTTCS---------------------
T ss_pred heeeeeeeeecc--ccccccccccchhhhhhhccccccccccccccccccccc-ccccc---------------------
Confidence 789999887532 123457889999999999999999999999999999733 32211
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCC-cEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccCceeHHhHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGT-DVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLGAVHVKDVAKAQ 158 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~-~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~D~a~~~ 158 (232)
+.|+.+|..+|+.+. +.++ +++|+||+.+||+..... ... .. ..+.. .....+..||++|+|+++
T Consensus 120 -~~y~~~K~~~E~~l~----~~~~~~~~I~Rp~~v~G~~~~~~---~~~----~~-~~~~~~~~~~~~~~i~v~DvA~ai 186 (212)
T d2a35a1 120 -IFYNRVKGELEQALQ----EQGWPQLTIARPSLLFGPREEFR---LAE----IL-AAPIARILPGKYHGIEACDLARAL 186 (212)
T ss_dssp -SHHHHHHHHHHHHHT----TSCCSEEEEEECCSEESTTSCEE---GGG----GT-TCCCC----CHHHHHHHHHHHHHH
T ss_pred -cchhHHHHHHhhhcc----ccccccceeeCCcceeCCccccc---HHH----HH-HHHHhhccCCCCcEEEHHHHHHHH
Confidence 489999999998864 3466 499999999999875431 111 11 11111 222445679999999999
Q ss_pred HHhhcCCCC
Q 026820 159 VLLFETSAA 167 (232)
Q Consensus 159 ~~~~~~~~~ 167 (232)
+.++.++..
T Consensus 187 ~~~~~~~~~ 195 (212)
T d2a35a1 187 WRLALEEGK 195 (212)
T ss_dssp HHHHTCCCS
T ss_pred HHHHcCCCC
Confidence 999977654
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=1.8e-13 Score=100.77 Aligned_cols=133 Identities=15% Similarity=0.035 Sum_probs=95.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
|+|||++|.... ......+..+++++++++++.|++|||++||.+. ++.... .+ +.
T Consensus 69 d~vi~~~g~~~~-------~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~-~~~~~~---------~~--~~----- 124 (205)
T d1hdoa_ 69 DAVIVLLGTRND-------LSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFL-LWDPTK---------VP--PR----- 124 (205)
T ss_dssp SEEEECCCCTTC-------CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGG-TSCTTC---------SC--GG-----
T ss_pred CEEEEEeccCCc-------hhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeec-cCCCcc---------cc--cc-----
Confidence 789999987543 2233577889999999999999999999999743 433221 01 11
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVL 160 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 160 (232)
...|...|..+|++++ +.+++++|+||+.+++....+.... ...+.....+++++|+|++++.
T Consensus 125 ~~~~~~~~~~~e~~l~----~~~~~~tiirp~~~~~~~~~~~~~~-------------~~~~~~~~~~i~~~DvA~~~~~ 187 (205)
T d1hdoa_ 125 LQAVTDDHIRMHKVLR----ESGLKYVAVMPPHIGDQPLTGAYTV-------------TLDGRGPSRVISKHDLGHFMLR 187 (205)
T ss_dssp GHHHHHHHHHHHHHHH----HTCSEEEEECCSEEECCCCCSCCEE-------------ESSSCSSCSEEEHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHH----hcCCceEEEecceecCCCCcccEEE-------------eeCCCCCCCcCCHHHHHHHHHH
Confidence 1478899999998754 4699999999999987543322110 0123456789999999999999
Q ss_pred hhcCCCCCce-EEEe
Q 026820 161 LFETSAASGR-YLCT 174 (232)
Q Consensus 161 ~~~~~~~~~~-~~~~ 174 (232)
+++++...|+ +..+
T Consensus 188 ~l~~~~~~g~~~~~s 202 (205)
T d1hdoa_ 188 CLTTDEYDGHSTYPS 202 (205)
T ss_dssp TTSCSTTTTCEEEEE
T ss_pred HhCCCCCCCEEEecC
Confidence 9998876663 4443
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.39 E-value=1.2e-12 Score=98.10 Aligned_cols=162 Identities=18% Similarity=0.044 Sum_probs=106.1
Q ss_pred CeEEEeecCCCCCC-------------CCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccC
Q 026820 1 MGVFHLASPNTLDD-------------PKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~~~-------------~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~ 67 (232)
|+|||+|+...... ..........+|+.++++++..+...+.+++.+.|+... +...
T Consensus 70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~~~--------- 139 (252)
T d2q46a1 70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGG-TNPD--------- 139 (252)
T ss_dssp SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTT-TCTT---------
T ss_pred eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccccccccccccccc-CCCC---------
Confidence 78999998754311 112245667889999999999999888888988887522 1110
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 68 ETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 68 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
.+.. ......|...+...+.. ....+++++++||+.+||+..... .. ..+..........+
T Consensus 140 -----~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~ilRp~~v~g~~~~~~-~~--------~~~~~~~~~~~~~~ 200 (252)
T d2q46a1 140 -----HPLN-KLGNGNILVWKRKAEQY----LADSGTPYTIIRAGGLLDKEGGVR-EL--------LVGKDDELLQTDTK 200 (252)
T ss_dssp -----CGGG-GGGGCCHHHHHHHHHHH----HHHSSSCEEEEEECEEECSCTTSS-CE--------EEESTTGGGGSSCC
T ss_pred -----cccc-cccccchhhhhhhhhhh----hhcccccceeecceEEECCCcchh-hh--------hhccCcccccCCCC
Confidence 0110 11113566666655544 556799999999999999875431 11 11111222335568
Q ss_pred ceeHHhHHHHHHHhhcCCCCCc-eEEEecC----cccHHHHHHHHHhhC
Q 026820 148 AVHVKDVAKAQVLLFETSAASG-RYLCTNG----IYQFAEFAEKVSKLF 191 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~~~~~-~~~~~~~----~~s~~el~~~i~~~~ 191 (232)
++|++|+|++++.++.++...| .|+++++ ..++.++.+.+.+..
T Consensus 201 ~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~ 249 (252)
T d2q46a1 201 TVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVT 249 (252)
T ss_dssp EEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCC
T ss_pred eEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHH
Confidence 9999999999999999888777 5766432 356777777766543
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.36 E-value=1.8e-13 Score=106.49 Aligned_cols=161 Identities=16% Similarity=0.078 Sum_probs=104.8
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccccccc
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSH 80 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 80 (232)
++++|+++.... ..|..++.+++++|.+.+..++++.||.+. +.. .+..+..+.
T Consensus 77 ~~~~~~~~~~~~-----------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~-~~~---------~~~~~~~~~----- 130 (312)
T d1qyda_ 77 DVVISALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLPSEFGM-DPD---------IMEHALQPG----- 130 (312)
T ss_dssp SEEEECCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEECSCCSS-CTT---------SCCCCCSST-----
T ss_pred chhhhhhhhccc-----------ccchhhhhHHHHHHHHhcCCcEEEEeeccc-cCC---------Ccccccchh-----
Confidence 467777765332 245666788999999987677888887632 221 112222222
Q ss_pred chhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-c--CCcccCceeHHhHHHH
Q 026820 81 KIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-Q--EHYWLGAVHVKDVAKA 157 (232)
Q Consensus 81 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~i~v~D~a~~ 157 (232)
..|..+|..+|+. ....+++++++|++.+||+.......... .....+.... + +++.++++|++|+|++
T Consensus 131 -~~~~~~~~~~~~~----~~~~~~~~~i~r~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a 202 (312)
T d1qyda_ 131 -SITFIDKRKVRRA----IEAASIPYTYVSSNMFAGYFAGSLAQLDG---HMMPPRDKVLIYGDGNVKGIWVDEDDVGTY 202 (312)
T ss_dssp -THHHHHHHHHHHH----HHHTTCCBCEEECCEEHHHHTTTSSCTTC---CSSCCSSEECCBTTSCSEEEEECHHHHHHH
T ss_pred -hhhhHHHHHHHHh----hcccccceEEeccceeecCCccchhhHHH---HhhhcccccccccccccccceeeHHHHHHH
Confidence 3677777766665 55669999999999999965432111110 0011222222 3 4478899999999999
Q ss_pred HHHhhcCCCCCc-e-EEEe-cCcccHHHHHHHHHhhCCCCCC
Q 026820 158 QVLLFETSAASG-R-YLCT-NGIYQFAEFAEKVSKLFPEYPI 196 (232)
Q Consensus 158 ~~~~~~~~~~~~-~-~~~~-~~~~s~~el~~~i~~~~p~~~~ 196 (232)
++.++.++...+ . |+++ ++.+|++|+++.+++.+ +.+.
T Consensus 203 ~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~-g~~~ 243 (312)
T d1qyda_ 203 TIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLS-EQNL 243 (312)
T ss_dssp HHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHH-TCCC
T ss_pred HHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHH-CCCC
Confidence 999998877655 3 5555 46699999999999987 4433
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.35 E-value=2.9e-13 Score=104.83 Aligned_cols=146 Identities=13% Similarity=0.119 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCCc
Q 026820 26 AVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTD 105 (232)
Q Consensus 26 nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~ 105 (232)
++.++.++++++...+++++++.||.+. .. ++.....+. ..+...+...|..+ .+.+++
T Consensus 88 ~~~~~~~~~~a~~~~~~~~~~~~s~~~~-~~----------~~~~~~~~~------~~~~~~~~~~~~~~----~~~~~~ 146 (307)
T d1qyca_ 88 QIESQVNIIKAIKEVGTVKRFFPSEFGN-DV----------DNVHAVEPA------KSVFEVKAKVRRAI----EAEGIP 146 (307)
T ss_dssp GSGGGHHHHHHHHHHCCCSEEECSCCSS-CT----------TSCCCCTTH------HHHHHHHHHHHHHH----HHHTCC
T ss_pred ccchhhHHHHHHHHhccccceeeecccc-cc----------ccccccccc------cccccccccccchh----hccCCC
Confidence 4445678889999888888999887522 11 111111111 35666666666664 345899
Q ss_pred EEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc---cCCcccCceeHHhHHHHHHHhhcCCCCCc--eEEEe-cCccc
Q 026820 106 VVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT---QEHYWLGAVHVKDVAKAQVLLFETSAASG--RYLCT-NGIYQ 179 (232)
Q Consensus 106 ~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~v~D~a~~~~~~~~~~~~~~--~~~~~-~~~~s 179 (232)
++++|++.+||+...... .+.....++.... .+++.++++|++|+|++++.++.++...+ .|+++ ++.+|
T Consensus 147 ~~i~r~~~v~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s 222 (307)
T d1qyca_ 147 YTYVSSNCFAGYFLRSLA----QAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLS 222 (307)
T ss_dssp BEEEECCEEHHHHTTTTT----CTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEE
T ss_pred ceecccceecCCCccchh----hhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccC
Confidence 999999999997543211 1112222333333 34578899999999999999998876665 35554 57799
Q ss_pred HHHHHHHHHhhCCCCCCc
Q 026820 180 FAEFAEKVSKLFPEYPIH 197 (232)
Q Consensus 180 ~~el~~~i~~~~p~~~~~ 197 (232)
+.|+++.+.+.+ +.+++
T Consensus 223 ~~ei~~~~~~~~-G~~~~ 239 (307)
T d1qyca_ 223 LNELVALWEKKI-DKTLE 239 (307)
T ss_dssp HHHHHHHHHHHT-TSCCE
T ss_pred HHHHHHHHHHHH-CCCCc
Confidence 999999999998 54443
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=98.85 E-value=5.5e-10 Score=88.21 Aligned_cols=142 Identities=14% Similarity=0.050 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHHcCC
Q 026820 25 PAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGT 104 (232)
Q Consensus 25 ~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~ 104 (232)
.|+..+.+++++|.+.|++++++.||.... .... ..+. .+|..+|...|..+. +.++
T Consensus 85 ~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~-~~~~------------~~~~------~~~~~~k~~~~~~~~----~~~~ 141 (350)
T d1xgka_ 85 DEIAIGKDLADAAKRAGTIQHYIYSSMPDH-SLYG------------PWPA------VPMWAPKFTVENYVR----QLGL 141 (350)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEEEECCCG-GGTS------------SCCC------CTTTHHHHHHHHHHH----TSSS
T ss_pred hhhhhhhHHHHHHHHhCCCceEEEeecccc-ccCC------------cccc------hhhhhhHHHHHHHHH----hhcc
Confidence 467788999999999998888888886321 1111 0011 357788888887643 5589
Q ss_pred cEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCC----ccCCcccCceeH-HhHHHHHHHhhcCCC--CCc-eEEEecC
Q 026820 105 DVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKD----TQEHYWLGAVHV-KDVAKAQVLLFETSA--ASG-RYLCTNG 176 (232)
Q Consensus 105 ~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~v-~D~a~~~~~~~~~~~--~~~-~~~~~~~ 176 (232)
+++++|++.+++............ .....+... ..++..++++++ +|+++++..++...+ ..| .|+++++
T Consensus 142 ~~~~vr~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g~ 219 (350)
T d1xgka_ 142 PSTFVYAGIYNNNFTSLPYPLFQM--ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFE 219 (350)
T ss_dssp CEEEEEECEEGGGCBSSSCSSCBE--EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECSE
T ss_pred Cceeeeeceeeccccccccccccc--cccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeCC
Confidence 999999999876432221111000 001111111 134566778875 799999999986543 245 5788888
Q ss_pred cccHHHHHHHHHhhC
Q 026820 177 IYQFAEFAEKVSKLF 191 (232)
Q Consensus 177 ~~s~~el~~~i~~~~ 191 (232)
.+|+.|+++.+.+.+
T Consensus 220 ~~T~~eia~~l~~~~ 234 (350)
T d1xgka_ 220 TLSPVQVCAAFSRAL 234 (350)
T ss_dssp EECHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 899999999999988
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.80 E-value=2.4e-08 Score=74.35 Aligned_cols=145 Identities=16% Similarity=0.086 Sum_probs=92.4
Q ss_pred CeEEEeecCCCC----CCCCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL----DDPKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~----~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||.... ....+..+..+++|+.++..+.+++ ++.+-.++|++||.++..+.+.
T Consensus 75 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~------------- 141 (237)
T d1uzma1 75 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGN------------- 141 (237)
T ss_dssp SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----C-------------
T ss_pred eEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcc-------------
Confidence 799999998655 1122334677899999988887654 3445558999999855433222
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+..+.... ........+....| ..-+.
T Consensus 142 --------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~---~~~~~~~~~~~~~p------l~R~~ 204 (237)
T d1uzma1 142 --------QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA---LDERIQQGALQFIP------AKRVG 204 (237)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH---SCHHHHHHHGGGCT------TCSCB
T ss_pred --------cHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhc---cCHHHHHHHHhcCC------CCCCc
Confidence 148999999999999988765 48999999999985321100 01111222222211 11356
Q ss_pred eHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 150 HVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
..+|+|+++.+++.. .-.+|. ..++|
T Consensus 205 ~pedvA~~v~fL~S~~s~~itG~~i~vdG 233 (237)
T d1uzma1 205 TPAEVAGVVSFLASEDASYISGAVIPVDG 233 (237)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence 799999999998854 335674 45554
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.78 E-value=7.6e-08 Score=72.20 Aligned_cols=145 Identities=16% Similarity=0.109 Sum_probs=96.9
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||........ ++.+..+++|+.++..+.+++. +.+-.++|++||..+..+.+.
T Consensus 89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~------------- 155 (251)
T d2c07a1 89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVG------------- 155 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT-------------
T ss_pred eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCC-------------
Confidence 7999999987662222 2446777899999888887753 344458999999865433222
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+-.+.... ........+....|. .-+.
T Consensus 156 --------~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~---~~~~~~~~~~~~~pl------~R~~ 218 (251)
T d2c07a1 156 --------QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK---ISEQIKKNIISNIPA------GRMG 218 (251)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------CCHHHHHHHHTTCTT------SSCB
T ss_pred --------CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccc---cCHHHHHHHHhcCCC------CCCc
Confidence 148999999999999998765 48999999999996543221 123333333333221 1266
Q ss_pred eHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 150 HVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
..+|+|+++..++.. .-.+|. ..++|
T Consensus 219 ~pedvA~~v~fL~S~~s~~itG~~i~vDG 247 (251)
T d2c07a1 219 TPEEVANLACFLSSDKSGYINGRVFVIDG 247 (251)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CHHHHHHHHHHHhCchhCCCcCcEEEECC
Confidence 799999999998854 335664 45554
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.74 E-value=3.9e-08 Score=73.49 Aligned_cols=145 Identities=12% Similarity=0.082 Sum_probs=96.2
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..+..+..+++|+.++..+.+++. +.+-.++|++||.++..+.+.
T Consensus 80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~------------- 146 (243)
T d1q7ba_ 80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGG------------- 146 (243)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT-------------
T ss_pred ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCC-------------
Confidence 78999999876522 122345778999999999888764 334458999999855433222
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+-.+.... ........+....|. .-+.
T Consensus 147 --------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~---~~~~~~~~~~~~~pl------~R~~ 209 (243)
T d1q7ba_ 147 --------QANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA---LSDDQRAGILAQVPA------GRLG 209 (243)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT---SCHHHHHHHHTTCTT------SSCB
T ss_pred --------CHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhh---hhhhHHHHHHhcCCC------CCCC
Confidence 158999999999999998865 48999999999884321110 112222223222211 1356
Q ss_pred eHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 150 HVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
..+|+|+++.+++.. ...+|. ..++|
T Consensus 210 ~pedvA~~v~fL~S~~s~~itGq~i~vdG 238 (243)
T d1q7ba_ 210 GAQEIANAVAFLASDEAAYITGETLHVNG 238 (243)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CHHHHHHHHHHHhCchhcCCcCCeEEECC
Confidence 799999999999854 335674 45554
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.72 E-value=9.3e-08 Score=71.86 Aligned_cols=148 Identities=18% Similarity=0.109 Sum_probs=97.6
Q ss_pred CeEEEeecCCCCCCCC---CchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDPK---DPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~---~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|++||+||........ ++.+..+++|+.++..+.+++. +.+-.++|++||.++..+.+.
T Consensus 90 DilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~-------------- 155 (255)
T d1fmca_ 90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNIN-------------- 155 (255)
T ss_dssp CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTT--------------
T ss_pred CEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccc--------------
Confidence 8999999987652222 2345678899999998887654 334457999998744322211
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCcee
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVH 150 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (232)
...|+.+|...+.+.+.++.+ .|+++..+-||.+-.+..... ........+....|. .-+..
T Consensus 156 -------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~--~~~e~~~~~~~~~pl------~R~g~ 220 (255)
T d1fmca_ 156 -------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTPI------RRLGQ 220 (255)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CCHHHHHHHHHTCSS------CSCBC
T ss_pred -------cccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhcc--CCHHHHHHHHhcCCC------CCCcC
Confidence 158999999999999988865 489999999999854321111 112333333333322 12567
Q ss_pred HHhHHHHHHHhhcC--CCCCce-EEEecCc
Q 026820 151 VKDVAKAQVLLFET--SAASGR-YLCTNGI 177 (232)
Q Consensus 151 v~D~a~~~~~~~~~--~~~~~~-~~~~~~~ 177 (232)
.+|+|++++.++.. .-.+|. ..++|..
T Consensus 221 pedvA~~v~fL~S~~s~~itG~~i~vDGG~ 250 (255)
T d1fmca_ 221 PQDIANAALFLCSPAASWVSGQILTVSGGG 250 (255)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence 89999999999854 335675 4666654
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=98.70 E-value=1.3e-07 Score=70.77 Aligned_cols=148 Identities=17% Similarity=0.064 Sum_probs=91.6
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||..... ...+..+..+++|+.++..+.+++. +.+-.++|++||..+..+.+.
T Consensus 82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~------------- 148 (247)
T d2ew8a1 82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEA------------- 148 (247)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSS-------------
T ss_pred CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcc-------------
Confidence 8999999997652 1223456788999999998888764 344458999999855322211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+-.+..... .......... .. .....-+.
T Consensus 149 --------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~-~~----~~~l~r~~ 213 (247)
T d2ew8a1 149 --------YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS--ALSAMFDVLP-NM----LQAIPRLQ 213 (247)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CT----TSSSCSCC
T ss_pred --------cccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccc--ccchhHHHHH-HH----hccCCCCC
Confidence 148999999999999988865 489999999998864432111 0001111110 00 00111356
Q ss_pred eHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 150 HVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
..+|+|+++++++.. .-.+|. ..++|.
T Consensus 214 ~pedvA~~v~fL~S~~s~~itG~~i~vDGG 243 (247)
T d2ew8a1 214 VPLDLTGAAAFLASDDASFITGQTLAVDGG 243 (247)
T ss_dssp CTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred CHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 789999999999854 335674 456553
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=98.70 E-value=2.1e-07 Score=69.96 Aligned_cols=148 Identities=14% Similarity=0.106 Sum_probs=95.8
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+++|+||..... ...++....+++|+.++..+.+++. +.+..++|++||..+.-+.+.
T Consensus 86 dilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~------------- 152 (258)
T d1ae1a_ 86 NILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPS------------- 152 (258)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTT-------------
T ss_pred EEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccccc-------------
Confidence 7899999987651 1222446778999999988887764 335568999999854222111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC---ChhHHHHHHHHhCCCCccCCccc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV---NASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
...|+.+|...+.+.+.++.+ .|+++.++.||.+..+...... .........+....|. .
T Consensus 153 --------~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl------g 218 (258)
T d1ae1a_ 153 --------VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM------G 218 (258)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT------C
T ss_pred --------chhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC------C
Confidence 158999999999999998865 3899999999999754322111 1122333333332211 1
Q ss_pred CceeHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 147 GAVHVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
-+...+|+|.++..++.. ...+|. ..++|
T Consensus 219 R~~~pediA~~v~fL~S~~s~~itG~~i~vDG 250 (258)
T d1ae1a_ 219 RAGKPQEVSALIAFLCFPAASYITGQIIWADG 250 (258)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCcCHHHHHHHHHHHhChhhCCCcCcEEEeCC
Confidence 267899999999999953 445775 45554
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.69 E-value=3.5e-07 Score=69.16 Aligned_cols=152 Identities=18% Similarity=0.151 Sum_probs=97.5
Q ss_pred CeEEEeecCCCCC---CCC---CchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLD---DPK---DPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~---~~~---~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||..... ... +..+..+++|+.++..+.+++. +.+-.++|++||.+...+....
T Consensus 84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~---------- 153 (268)
T d2bgka1 84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGV---------- 153 (268)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTS----------
T ss_pred ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccccc----------
Confidence 7999999975431 111 2345677899999988888764 3344589999987553322110
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+-.+........................ .-
T Consensus 154 ----------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~----gr 219 (268)
T d2bgka1 154 ----------SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLK----GT 219 (268)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSC----SC
T ss_pred ----------ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccC----CC
Confidence 137999999999999998765 4899999999998765433222222222222222111111 13
Q ss_pred ceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
+...+|+|+++++++.. ...+|. ..++|.
T Consensus 220 ~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG 251 (268)
T d2bgka1 220 LLRAEDVADAVAYLAGDESKYVSGLNLVIDGG 251 (268)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhChhhCCccCceEEECcC
Confidence 66799999999999854 345675 466653
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.69 E-value=3.1e-07 Score=68.79 Aligned_cols=149 Identities=11% Similarity=0.043 Sum_probs=95.4
Q ss_pred CeEEEeecCCCC-C-CCC---CchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-D-DPK---DPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-~-~~~---~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||.... . ... ++.+..+++|+.++..+++++. +.+-.++|++||.+...+.+.
T Consensus 73 DiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~------------ 140 (252)
T d1zmta1 73 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKE------------ 140 (252)
T ss_dssp CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTT------------
T ss_pred CEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccccc------------
Confidence 899999987532 1 111 2245667889998888887753 444458999999744222111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCC-----hhHHHHHHHHhCCCCccCC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVN-----ASGAVLQRLLQGSKDTQEH 143 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 143 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+-.+....... ........+.+..+.
T Consensus 141 ---------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl---- 207 (252)
T d1zmta1 141 ---------LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL---- 207 (252)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS----
T ss_pred ---------ccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCC----
Confidence 148999999999999988765 48999999999986543322111 112223333322221
Q ss_pred cccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 144 YWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
.-+...+|+|+++++++... -.+|. ..++|.
T Consensus 208 --~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG 241 (252)
T d1zmta1 208 --QRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG 241 (252)
T ss_dssp --SSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred --CCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 12567999999999998543 35664 456543
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.69 E-value=6.5e-08 Score=72.27 Aligned_cols=145 Identities=15% Similarity=0.081 Sum_probs=95.7
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||..... ...+..+..+++|+.++..+.+++. +.+-.++|++||.++..+.+.
T Consensus 81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~------------- 147 (244)
T d1edoa_ 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIG------------- 147 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTT-------------
T ss_pred CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCC-------------
Confidence 8999999987651 1223346788999999988887764 334458999999866444322
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++.++.||.+-.+.... ........+....|. .-+.
T Consensus 148 --------~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~pl------~R~~ 210 (244)
T d1edoa_ 148 --------QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK---LGEDMEKKILGTIPL------GRTG 210 (244)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT---TCHHHHHHHHTSCTT------CSCB
T ss_pred --------CHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHH---hhHHHHHHHHhcCCC------CCCc
Confidence 148999999999999998875 48999999999884321110 112222333222211 1356
Q ss_pred eHHhHHHHHHHhhcC---CCCCce-EEEec
Q 026820 150 HVKDVAKAQVLLFET---SAASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~---~~~~~~-~~~~~ 175 (232)
..+|+|+++.+++.. ...+|. ..++|
T Consensus 211 ~p~dvA~~v~fLa~S~~a~~itG~~i~vdG 240 (244)
T d1edoa_ 211 QPENVAGLVEFLALSPAASYITGQAFTIDG 240 (244)
T ss_dssp CHHHHHHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred CHHHHHHHHHHHHCCchhcCCcCCeEEeCC
Confidence 799999999988632 235664 44544
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.69 E-value=1.7e-07 Score=70.51 Aligned_cols=146 Identities=14% Similarity=0.128 Sum_probs=82.7
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..++.+..+++|+.++..+.+++. +.+-.++|++||.....+.+.
T Consensus 88 dilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~------------- 154 (259)
T d1xq1a_ 88 DILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV------------- 154 (259)
T ss_dssp SEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------------
T ss_pred ccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccc-------------
Confidence 78999999876511 223346788999999998888754 334458999999755332221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++.++-||.+-.+..... ........+....| ..-+.
T Consensus 155 --------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~--~~~~~~~~~~~~~p------l~R~~ 218 (259)
T d1xq1a_ 155 --------GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV--YDDEFKKVVISRKP------LGRFG 218 (259)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------------C
T ss_pred --------cccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhh--chHHHHHHHHhCCC------CCCCc
Confidence 148999999999999988765 489999999998854322110 00011111111111 11256
Q ss_pred eHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 150 HVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
..+|+|.+++.++.. ...+|. ..++|
T Consensus 219 ~pedvA~~v~fL~S~~s~~iTG~~i~vDG 247 (259)
T d1xq1a_ 219 EPEEVSSLVAFLCMPAASYITGQTICVDG 247 (259)
T ss_dssp CGGGGHHHHHHHTSGGGTTCCSCEEECCC
T ss_pred CHHHHHHHHHHHhCchhcCCcCcEEEeCC
Confidence 789999999998853 345664 34443
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.67 E-value=5.1e-07 Score=67.19 Aligned_cols=144 Identities=20% Similarity=0.160 Sum_probs=94.8
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||..... ...+..+..+++|+.++..+.+++.. .+...++.+||. ...+.+.
T Consensus 79 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~------------- 144 (242)
T d1ulsa_ 79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLG------------- 144 (242)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTT-------------
T ss_pred eEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCCCC-------------
Confidence 8999999987651 12223467889999999999988653 244467777764 3222111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+-.+.... ........+....|. .-+.
T Consensus 145 --------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~---~~~~~~~~~~~~~pl------~R~~ 207 (242)
T d1ulsa_ 145 --------QANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK---VPEKVREKAIAATPL------GRAG 207 (242)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS---SCHHHHHHHHHTCTT------CSCB
T ss_pred --------CcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhc---CCHHHHHHHHhcCCC------CCCC
Confidence 158999999999999988765 38999999999996543221 122333333333322 1255
Q ss_pred eHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 150 HVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
..+|+++++.+++.. ...+|. ..++|
T Consensus 208 ~pedia~~v~fL~S~~s~~itG~~i~vDG 236 (242)
T d1ulsa_ 208 KPLEVAYAALFLLSDESSFITGQVLFVDG 236 (242)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CHHHHHHHHHHHhchhhCCCCCcEEEECC
Confidence 689999999998854 345675 45554
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.66 E-value=2.4e-07 Score=69.08 Aligned_cols=140 Identities=17% Similarity=0.130 Sum_probs=94.1
Q ss_pred CeEEEeecCCCCCCC----CCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDP----KDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~----~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||....... .+..+..+++|+.++..+.+++. +.+-.++|++||.....+.+.
T Consensus 82 dilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~------------- 148 (244)
T d1nffa_ 82 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVA------------- 148 (244)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------
T ss_pred eEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccccc-------------
Confidence 899999998765211 22346778999999999888653 334458999999855322111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCc-ccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHY-WLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 148 (232)
...|+.+|...+.+.+.++.+ .|+++..+-||.+-.+.... .+...... ..-+
T Consensus 149 --------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~---------------~~~~~~~~pl~R~ 205 (244)
T d1nffa_ 149 --------CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW---------------VPEDIFQTALGRA 205 (244)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT---------------SCTTCSCCSSSSC
T ss_pred --------ccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhh---------------hhHHHHhccccCC
Confidence 158999999999999998865 48999999999885432110 00000111 1136
Q ss_pred eeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
...+|+|+++++++.. ...+|. +.++|.
T Consensus 206 ~~p~diA~~v~fL~s~~s~~itG~~i~vDGG 236 (244)
T d1nffa_ 206 AEPVEVSNLVVYLASDESSYSTGAEFVVDGG 236 (244)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHhChhhCCCcCCEEEECCC
Confidence 7899999999998853 345674 566553
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.65 E-value=2.8e-07 Score=69.02 Aligned_cols=148 Identities=16% Similarity=0.086 Sum_probs=95.4
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..+..+..+++|+.++..+.+++.. .+-.++|++||..+......
T Consensus 85 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~------------- 151 (251)
T d1vl8a_ 85 DTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMP------------- 151 (251)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSS-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCc-------------
Confidence 89999999865421 2223467789999999988887643 34458999998633111100
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
....|+.+|...+.+.+.++.+ .|+++..+.||.+-.+..... .........+....|. .-+.
T Consensus 152 -------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~pl------~R~~ 217 (251)
T d1vl8a_ 152 -------NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAV-FSDPEKLDYMLKRIPL------GRTG 217 (251)
T ss_dssp -------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHH-HTCHHHHHHHHHTCTT------SSCB
T ss_pred -------cccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhc-cCCHHHHHHHHhcCCC------CCCC
Confidence 0148999999999999988765 489999999999854432110 0012233333333322 1245
Q ss_pred eHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 150 HVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
..+|+|++++.++.. ...+|. ..++|
T Consensus 218 ~pedvA~~v~fL~S~~a~~itG~~i~vDG 246 (251)
T d1vl8a_ 218 VPEDLKGVAVFLASEEAKYVTGQIIFVDG 246 (251)
T ss_dssp CGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CHHHHHHHHHHHhCchhCCCcCcEEEeCc
Confidence 689999999998854 335674 45554
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.65 E-value=2e-07 Score=69.41 Aligned_cols=126 Identities=11% Similarity=0.077 Sum_probs=88.4
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..+..+..+++|+.++..+.+++. +.+-.++|++||.++..+.+.
T Consensus 87 DilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~------------- 153 (240)
T d2bd0a1 87 DCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRH------------- 153 (240)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------
T ss_pred ceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCC-------------
Confidence 89999999876521 223346788999999888887764 334458999999855332221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCC-cccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEH-YWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 148 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+--+.... .++ ....+
T Consensus 154 --------~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~-------------------~~~~~~~~~ 206 (240)
T d2bd0a1 154 --------SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK-------------------VDDEMQALM 206 (240)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC-------------------CCSTTGGGS
T ss_pred --------ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh-------------------cCHhhHhcC
Confidence 158999999999999888765 48999999999885432110 011 11234
Q ss_pred eeHHhHHHHHHHhhcCCC
Q 026820 149 VHVKDVAKAQVLLFETSA 166 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~ 166 (232)
...+|+|++++.++..+.
T Consensus 207 ~~PedvA~~v~~l~s~~~ 224 (240)
T d2bd0a1 207 MMPEDIAAPVVQAYLQPS 224 (240)
T ss_dssp BCHHHHHHHHHHHHTSCT
T ss_pred CCHHHHHHHHHHHHcCCc
Confidence 568999999999987654
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=98.64 E-value=1.9e-07 Score=70.31 Aligned_cols=149 Identities=19% Similarity=0.155 Sum_probs=92.9
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||..... ...+..+..+++|+.++..+.+++. +.+-.++|++||.+...+.+.
T Consensus 85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~------------- 151 (260)
T d1x1ta1 85 DILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASAN------------- 151 (260)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------
T ss_pred cEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCC-------------
Confidence 8999999987652 1223346788999999888887753 334458999999855333222
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChh--------HHHHHH-HHhCCCCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNAS--------GAVLQR-LLQGSKDT 140 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~--------~~~~~~-~~~~~~~~ 140 (232)
...|+.+|...+.+.+.++.+ .|+.+..+.||.+-.+......... .....+ +...
T Consensus 152 --------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 219 (260)
T d1x1ta1 152 --------KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEK---- 219 (260)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHH----
T ss_pred --------cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhc----
Confidence 148999999999999998865 4899999999988543211100000 000000 0000
Q ss_pred cCCcccCceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
.| ..-+...+|+|+++++++.. ...+|. ..++|.
T Consensus 220 ~P--l~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG 256 (260)
T d1x1ta1 220 QP--SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp CT--TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CC--CCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence 00 11367799999999998854 345675 455543
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.64 E-value=6e-08 Score=73.11 Aligned_cols=149 Identities=15% Similarity=0.063 Sum_probs=97.6
Q ss_pred CeEEEeecCCCCCCCC-C---chhhhHHHHHHHHHHHHHHHHHcCCCEEEEecccceeccCCCCCCCCccCCCCCCCccc
Q 026820 1 MGVFHLASPNTLDDPK-D---PEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDF 76 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~-~---~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~ 76 (232)
|.|+|++|........ . .....+++|+.++.++.+++...+..++|++||+++..+.+..
T Consensus 91 ~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~---------------- 154 (259)
T d2fr1a1 91 SAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGL---------------- 154 (259)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTC----------------
T ss_pred cccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCccc----------------
Confidence 5799999997662111 1 2245678999999999999888777799999999776665442
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHH
Q 026820 77 CKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAK 156 (232)
Q Consensus 77 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~ 156 (232)
..|+.+|...|.+...+. ..|++++.+.||.+.+++.... .+...+. ......+..+++++
T Consensus 155 -----~~YaAaka~l~~la~~~~-~~Gi~v~~I~pg~~~~~g~~~~------~~~~~~~-------~~G~~~~~~~~~~~ 215 (259)
T d2fr1a1 155 -----GGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEG------PVADRFR-------RHGVIEMPPETACR 215 (259)
T ss_dssp -----TTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC------------------CT-------TTTEECBCHHHHHH
T ss_pred -----HHHHHHHHhHHHHHHHHH-hCCCCEEECCCCcccCCccccc------hHHHHHH-------hcCCCCCCHHHHHH
Confidence 379999999999887764 5589999999998876542211 1111111 11124567999999
Q ss_pred HHHHhhcCCCCCceEEEecCcccHHHHHHHHH
Q 026820 157 AQVLLFETSAASGRYLCTNGIYQFAEFAEKVS 188 (232)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~ 188 (232)
++..++......... . ++.|..++....
T Consensus 216 ~l~~~l~~~~~~~~v-~---~~d~~~~~~~~~ 243 (259)
T d2fr1a1 216 ALQNALDRAEVCPIV-I---DVRWDRFLLAYT 243 (259)
T ss_dssp HHHHHHHTTCSSCEE-C---EECHHHHHHHHT
T ss_pred HHHHHHhCCCceEEE-E---eCcHHHHHHhhh
Confidence 999999776544432 1 234555544443
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.63 E-value=1.7e-07 Score=70.40 Aligned_cols=141 Identities=15% Similarity=0.082 Sum_probs=95.7
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHc-------CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKF-------GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~-------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|++||+||... .+..+..+++|+.++.++.+++... +..++|++||..+..+.+.
T Consensus 86 DilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~-------------- 147 (254)
T d1sbya1 86 DILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQ-------------- 147 (254)
T ss_dssp CEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------
T ss_pred CEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCC--------------
Confidence 89999999876 4668899999999999998876532 1247999999855333222
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCC--CCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQ--PYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|.....+.+.++.+ .|+++..+-||.|..+-.. .........+.+.. ..+..
T Consensus 148 -------~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~---------~~~~~ 211 (254)
T d1sbya1 148 -------VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL---------LSHPT 211 (254)
T ss_dssp -------SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH---------TTSCC
T ss_pred -------CHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcc---------ccCCC
Confidence 148999999999998888765 4899999999999643100 00000001111111 12245
Q ss_pred eeHHhHHHHHHHhhcCCCCCc-eEEEecC
Q 026820 149 VHVKDVAKAQVLLFETSAASG-RYLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~~~~~-~~~~~~~ 176 (232)
...+++|++++.+++... +| .+.++|.
T Consensus 212 ~~~e~va~~~~~~~~~~~-tG~vi~vdgG 239 (254)
T d1sbya1 212 QTSEQCGQNFVKAIEANK-NGAIWKLDLG 239 (254)
T ss_dssp EEHHHHHHHHHHHHHHCC-TTCEEEEETT
T ss_pred CCHHHHHHHHHHhhhCCC-CCCEEEECCC
Confidence 579999999998887654 56 4667664
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=98.63 E-value=1.5e-07 Score=70.33 Aligned_cols=149 Identities=14% Similarity=0.055 Sum_probs=93.7
Q ss_pred CeEEEeecCCCCC-C---CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD-D---PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~-~---~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||..... . ..++.+..+++|+.++.++.+++. +.+-.++|++||.++..+.+.
T Consensus 78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~------------- 144 (248)
T d2d1ya1 78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQE------------- 144 (248)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTT-------------
T ss_pred CeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccc-------------
Confidence 8999999987651 1 112345678999999999988864 334458999999855333221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCC---CCChhHHHHHHHHhCCCCccCCccc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQP---YVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
...|+.+|...+.+.+.++.+ .|+++..+-||.+-.+.... ...........+....+ ..
T Consensus 145 --------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p------l~ 210 (248)
T d2d1ya1 145 --------NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHA------LR 210 (248)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTST------TS
T ss_pred --------cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCC------CC
Confidence 158999999999999888765 48999999999884321000 00000000111111111 11
Q ss_pred CceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 147 GAVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
-+...+|+++++.+++.. .-.+|. +.++|.
T Consensus 211 R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG 243 (248)
T d2d1ya1 211 RLGKPEEVAEAVLFLASEKASFITGAILPVDGG 243 (248)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcC
Confidence 356799999999999854 335674 456543
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.63 E-value=4e-07 Score=68.50 Aligned_cols=148 Identities=22% Similarity=0.175 Sum_probs=94.4
Q ss_pred CeEEEeecCCCC-----CCCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-----DDPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||.... ....+..+..+++|+.++..+.+++. +.+-.++|++||..+..+.+.
T Consensus 84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~------------ 151 (260)
T d1zema1 84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPN------------ 151 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTT------------
T ss_pred CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcc------------
Confidence 799999997643 11222346777899999998888764 334458999999855433222
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCC-------------CCCCChhHHHHHHHHh
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFP-------------QPYVNASGAVLQRLLQ 135 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~-------------~~~~~~~~~~~~~~~~ 135 (232)
...|+.+|...+.+.+.++.+. |+++..+-||.|-.+.. .............+..
T Consensus 152 ---------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (260)
T d1zema1 152 ---------MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG 222 (260)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHH
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHh
Confidence 1489999999999999888653 89999999999854310 0000011112222222
Q ss_pred CCCCccCCcccCceeHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 136 GSKDTQEHYWLGAVHVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 136 ~~~~~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
..|. .-+...+|+|+++++++.. ...+|. ..++|
T Consensus 223 ~~Pl------~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG 259 (260)
T d1zema1 223 SVPM------RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG 259 (260)
T ss_dssp TSTT------SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred cCCC------CCCcCHHHHHHHHHHHhCchhcCccCCeEEeCC
Confidence 2211 1256789999999999854 345664 45543
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=98.62 E-value=3e-07 Score=69.12 Aligned_cols=148 Identities=17% Similarity=0.120 Sum_probs=95.2
Q ss_pred CeEEEeecCCCC-C----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-D----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||.... . ...+..+..+++|+.++..+.+++. +.+-.++|++||.++..+.+.
T Consensus 85 DiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~------------ 152 (258)
T d1iy8a_ 85 DGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGN------------ 152 (258)
T ss_dssp SEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSS------------
T ss_pred CEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCC------------
Confidence 899999997543 1 1223446788999999999998763 334458999999855333221
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCC-----CCChhHHHHHHHHhCCCCccCC
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQP-----YVNASGAVLQRLLQGSKDTQEH 143 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 143 (232)
...|+.+|...+.+.+.++.+ .|+++..+-||.+..+.... ...........+....|.
T Consensus 153 ---------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl---- 219 (258)
T d1iy8a_ 153 ---------QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS---- 219 (258)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT----
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC----
Confidence 158999999999999988765 48999999999985321000 000111122222222211
Q ss_pred cccCceeHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 144 YWLGAVHVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 144 ~~~~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
.-+...+|+|+++++++.. ...+|. ..++|
T Consensus 220 --~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDG 252 (258)
T d1iy8a_ 220 --KRYGEAPEIAAVVAFLLSDDASYVNATVVPIDG 252 (258)
T ss_dssp --CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred --CCCcCHHHHHHHHHHHhCchhcCCcCceEEcCc
Confidence 1256799999999999854 345664 45554
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.62 E-value=1.8e-07 Score=71.43 Aligned_cols=150 Identities=21% Similarity=0.200 Sum_probs=93.9
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHH----HHcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAA----KKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|+++|+||...... ..+..+..+++|+.|+.++.+++ ++.+-.++|++||+++..+.+.
T Consensus 85 dilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~------------- 151 (285)
T d1jtva_ 85 DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPF------------- 151 (285)
T ss_dssp SEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTT-------------
T ss_pred hhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCC-------------
Confidence 78999999876622 22234677789999988888775 3445568999999855433222
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChh------------HHHHHHHHhCC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNAS------------GAVLQRLLQGS 137 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~------------~~~~~~~~~~~ 137 (232)
...|+.+|...+.+.+.++.+ .|+++.++.||.+--+-........ ..+...+...+
T Consensus 152 --------~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (285)
T d1jtva_ 152 --------NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSK 223 (285)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred --------chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHh
Confidence 148999999999999988765 4899999999998432211100000 00101000000
Q ss_pred CCccCCcccCceeHHhHHHHHHHhhcCCCCCceEEEec
Q 026820 138 KDTQEHYWLGAVHVKDVAKAQVLLFETSAASGRYLCTN 175 (232)
Q Consensus 138 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~~~~~ 175 (232)
.. ........+|+|++++.++..+.+.-+|..+.
T Consensus 224 ~~----~~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g~ 257 (285)
T d1jtva_ 224 QV----FREAAQNPEEVAEVFLTALRAPKPTLRYFTTE 257 (285)
T ss_dssp HH----HHHHCBCHHHHHHHHHHHHHCSSCCSEEESCS
T ss_pred hh----hcccCCCHHHHHHHHHHHHhCCCCCeEEecHH
Confidence 00 01124568999999999998776555665443
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.62 E-value=5.6e-07 Score=67.41 Aligned_cols=144 Identities=17% Similarity=0.105 Sum_probs=93.4
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..+..+..+++|+.++..+.+++. +.+-.++|++||.+...+.+.
T Consensus 81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~------------- 147 (254)
T d1hdca_ 81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL------------- 147 (254)
T ss_dssp CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------
T ss_pred cEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccc-------------
Confidence 79999999876521 122345778999999999888764 334469999999855332221
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCc-cCCcccC-
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDT-QEHYWLG- 147 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 147 (232)
...|+.+|...+.+.+.++.+ .|+++.++-||.+-.+ +........... .....+.
T Consensus 148 --------~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~-----------~~~~~~~~~~~~~~~~~pl~R 208 (254)
T d1hdca_ 148 --------TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP-----------MTAETGIRQGEGNYPNTPMGR 208 (254)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH-----------HHHHHTCCCSTTSCTTSTTSS
T ss_pred --------hhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc-----------cchhcCHHHHHHHHhCCCCCC
Confidence 158999999999999998865 4899999999988421 111111111111 1111111
Q ss_pred c-eeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 148 A-VHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 148 ~-i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
+ +..+|+|++++.++.. ...+|. +.++|.
T Consensus 209 ~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG 241 (254)
T d1hdca_ 209 VGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG 241 (254)
T ss_dssp CB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCCHHHHHHHHHHHhchhhCCCCCceEEeCCC
Confidence 2 3579999999999854 335674 566553
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=98.60 E-value=3e-07 Score=69.18 Aligned_cols=149 Identities=14% Similarity=0.090 Sum_probs=96.4
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||..... ...++.+..+++|+.++..+.+++. +.+-.++|++||.....+.+.
T Consensus 88 dilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~------------- 154 (259)
T d2ae2a_ 88 NILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPY------------- 154 (259)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTT-------------
T ss_pred eEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccccc-------------
Confidence 7899999987651 1122345788999999988888754 334458999999754222111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCC--CCChhHHHHHHHHhCCCCccCCcccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQP--YVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+.+.++.+ .|+++..+-||.+-.+.... ........+.++....|. .-
T Consensus 155 --------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl------~R 220 (259)
T d2ae2a_ 155 --------EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL------RR 220 (259)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT------CS
T ss_pred --------ccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCC------CC
Confidence 158999999999999998865 48999999999885321100 000112233333333221 12
Q ss_pred ceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 148 AVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
+...+|+|++++.++.. .-.+|. ..++|.
T Consensus 221 ~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 252 (259)
T d2ae2a_ 221 MGEPKELAAMVAFLCFPAASYVTGQIIYVDGG 252 (259)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence 56799999999998854 335664 456553
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.60 E-value=2e-07 Score=70.16 Aligned_cols=148 Identities=16% Similarity=0.082 Sum_probs=95.9
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH------cCCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK------FGVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~------~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||..... ...+..+..+++|+.++..+.+++.. .+..++|++||.....+.+.
T Consensus 81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~----------- 149 (257)
T d2rhca1 81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVH----------- 149 (257)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTT-----------
T ss_pred CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccccc-----------
Confidence 7999999987651 12223467889999999999998743 24458999998755333222
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCC--------CCChhHHHHHHHHhCCCC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQP--------YVNASGAVLQRLLQGSKD 139 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~--------~~~~~~~~~~~~~~~~~~ 139 (232)
...|+.+|...+.+.+.++.+. |+++..+-||.+-.+.... ..........++....|.
T Consensus 150 ----------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Pl 219 (257)
T d2rhca1 150 ----------AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI 219 (257)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTT
T ss_pred ----------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCC
Confidence 1589999999999999988764 7899999999884221000 000111222222222211
Q ss_pred ccCCcccCceeHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 140 TQEHYWLGAVHVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 140 ~~~~~~~~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
.-+...+|+|+++++++.. ...+|. ..++|
T Consensus 220 ------gR~~~pedia~~v~fL~S~~s~~itG~~i~vDG 252 (257)
T d2rhca1 220 ------GRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCG 252 (257)
T ss_dssp ------SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred ------CCCcCHHHHHHHHHHHhCchhcCCcCceEEECc
Confidence 1266799999999999853 445664 45554
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=98.59 E-value=3.6e-07 Score=68.79 Aligned_cols=148 Identities=16% Similarity=0.063 Sum_probs=93.9
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHH----HcCC-CEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAK----KFGV-RRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~-~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||..... ...++.+..+++|+.++..+.+++. +.+. .++|++||.+...+.+.
T Consensus 87 DiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~------------ 154 (261)
T d1geea_ 87 DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL------------ 154 (261)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT------------
T ss_pred CEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcc------------
Confidence 8999999987651 1222346778999999888887753 3333 35888998744222111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+ .|+++.++-||.+-.+..... .........+....|. .-+
T Consensus 155 ---------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~-~~~~~~~~~~~~~~pl------~R~ 218 (261)
T d1geea_ 155 ---------FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEK-FADPEQRADVESMIPM------GYI 218 (261)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH-HHSHHHHHHHHTTCTT------SSC
T ss_pred ---------ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhh-cCCHHHHHHHHhcCCC------CCC
Confidence 148999999999999988765 489999999999854321100 0001122222222211 125
Q ss_pred eeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
...+|+|++++.++.. .-.+|. +.++|.
T Consensus 219 ~~pediA~~v~fL~S~~s~~itG~~i~vDGG 249 (261)
T d1geea_ 219 GEPEEIAAVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence 6789999999999854 335674 456553
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.57 E-value=3.6e-07 Score=68.13 Aligned_cols=148 Identities=16% Similarity=0.090 Sum_probs=95.9
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH-----cCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK-----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~-----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||..... ...++.+..+++|+.++..+.+++.. .+..++|++||.+...+.+.
T Consensus 78 DilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~------------ 145 (244)
T d1pr9a_ 78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTN------------ 145 (244)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT------------
T ss_pred eEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccc------------
Confidence 8999999987651 12233467789999988888876532 23358999999754222111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+-.+...... .-......+....|. .-+
T Consensus 146 ---------~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~~pl------~R~ 209 (244)
T d1pr9a_ 146 ---------HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATW-SDPHKAKTMLNRIPL------GKF 209 (244)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTS-CSHHHHHHHHTTCTT------CSC
T ss_pred ---------hhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhc-cChHHHHHHHhcCCC------CCC
Confidence 148999999999999998865 4899999999988643211111 111223333333221 136
Q ss_pred eeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
...+|+|+++.+++.. .-.+|. ..++|.
T Consensus 210 ~~peevA~~v~fL~S~~a~~itG~~i~vDGG 240 (244)
T d1pr9a_ 210 AEVEHVVNAILFLLSDRSGMTTGSTLPVEGG 240 (244)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCchhCCcCCcEEEECcc
Confidence 6799999999998854 335674 455553
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.56 E-value=1.8e-07 Score=71.93 Aligned_cols=151 Identities=19% Similarity=0.079 Sum_probs=100.9
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..+..+..+++|+.++..+.+++. +.+-.++|++||.++.++.+..
T Consensus 92 DiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~------------ 159 (302)
T d1gz6a_ 92 DVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQ------------ 159 (302)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTC------------
T ss_pred CEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCc------------
Confidence 89999999876521 222346788999999999988854 3444599999998766554331
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
..|+.+|...+.+.+.++.+ .|+++.++-||.+--... .....- ...++
T Consensus 160 ---------~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~----~~~~~~---------------~~~~~ 211 (302)
T d1gz6a_ 160 ---------ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTE----TVMPED---------------LVEAL 211 (302)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTG----GGSCHH---------------HHHHS
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchh----hcCcHh---------------hHhcC
Confidence 48999999999999998865 489999999986621110 011111 11234
Q ss_pred eHHhHHHHHHHhhcCC-CCCce-EEEe--------------------cCcccHHHHHHHHHhhC
Q 026820 150 HVKDVAKAQVLLFETS-AASGR-YLCT--------------------NGIYQFAEFAEKVSKLF 191 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~~-~~~~~-~~~~--------------------~~~~s~~el~~~i~~~~ 191 (232)
..+|+|.++++++... ..+|. +.++ +.+.+..++.+.+.+..
T Consensus 212 ~PedvA~~v~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~ 275 (302)
T d1gz6a_ 212 KPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKIC 275 (302)
T ss_dssp CGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHT
T ss_pred CHHHHHHHHHHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHh
Confidence 5799999999988532 23332 2221 12457788888887765
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.55 E-value=9.3e-07 Score=66.29 Aligned_cols=148 Identities=15% Similarity=0.095 Sum_probs=93.5
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----Hc-CCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KF-GVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||...... ..+..+..+++|+.++..+.+++. +. .-.++|++||.++..+.+.
T Consensus 81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~------------ 148 (256)
T d1k2wa_ 81 DILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEAL------------ 148 (256)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT------------
T ss_pred cEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccccc------------
Confidence 89999999876511 222346778999999999887643 22 2348999999855322211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHh--CCCCc-----c
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQ--GSKDT-----Q 141 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~--~~~~~-----~ 141 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+-.+. .......... +.... +
T Consensus 149 ---------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~-------~~~~~~~~~~~~~~~~~~~~~~~ 212 (256)
T d1k2wa_ 149 ---------VGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH-------WDGVDAKFADYENLPRGEKKRQV 212 (256)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT-------HHHHHHHHHHHHTCCTTHHHHHH
T ss_pred ---------ccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh-------hhhhhhhhhhhccCChHHHHHHH
Confidence 158999999999999988865 48999999999885432 1111111100 00000 0
Q ss_pred CC-c-ccCceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 142 EH-Y-WLGAVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 142 ~~-~-~~~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
.. . ..-+...+|+|+++++++.. ...+|. ..++|.
T Consensus 213 ~~~~PlgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG 252 (256)
T d1k2wa_ 213 GAAVPFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGG 252 (256)
T ss_dssp HHHSTTSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred HhcCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEECcc
Confidence 00 0 11366799999999998853 345674 566654
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.55 E-value=3.7e-07 Score=68.26 Aligned_cols=147 Identities=18% Similarity=0.138 Sum_probs=94.3
Q ss_pred CeEEEeecCCCC-CC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTL-DD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~-~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||.... .. ..+..+..+++|+.++..+.+++.. .+ .++|++||.+...+.+.
T Consensus 81 DilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~------------ 147 (250)
T d1ydea1 81 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQ------------ 147 (250)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTT------------
T ss_pred CEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccC------------
Confidence 899999997543 11 1223467789999999998887643 23 48999999855333221
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCC---CCCChhHHHHHHHHhCCCCccCCcc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQ---PYVNASGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.|--+... .........+.+.....|.
T Consensus 148 ---------~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl------ 212 (250)
T d1ydea1 148 ---------AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL------ 212 (250)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT------
T ss_pred ---------cchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC------
Confidence 158999999999999998865 4899999999988422100 0000111223333332221
Q ss_pred cCceeHHhHHHHHHHhhcC-CCCCce-EEEec
Q 026820 146 LGAVHVKDVAKAQVLLFET-SAASGR-YLCTN 175 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~-~~~~~~-~~~~~ 175 (232)
.-+...+|+|+++++++.. .-.+|. +.++|
T Consensus 213 ~R~g~p~eva~~v~fL~Sda~~itG~~i~vDG 244 (250)
T d1ydea1 213 GRMGQPAEVGAAAVFLASEANFCTGIELLVTG 244 (250)
T ss_dssp SSCBCHHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred CCCCCHHHHHHHHHHHhCccCCCcCCeEEECC
Confidence 1366799999999998843 334664 45554
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=98.53 E-value=3.3e-07 Score=68.81 Aligned_cols=148 Identities=19% Similarity=0.126 Sum_probs=93.2
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcC-CCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFG-VRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||...... ..+..+..+++|+.++..+++++. +.+ -.++|++||.+...+.+.
T Consensus 80 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~------------ 147 (255)
T d1gega_ 80 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE------------ 147 (255)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT------------
T ss_pred cEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcc------------
Confidence 89999999865511 222346788999999999988753 223 347999998744222211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHH--hCCCCc-----c
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLL--QGSKDT-----Q 141 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~--~~~~~~-----~ 141 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+-.+ ....+..... .+.... +
T Consensus 148 ---------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~-------~~~~~~~~~~~~~~~~~~~~~~~~ 211 (255)
T d1gega_ 148 ---------LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP-------MWAEIDRQVSEAAGKPLGYGTAEF 211 (255)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH-------HHHHHHHHHHHHHTCCTTHHHHHH
T ss_pred ---------cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccCh-------HHhhhhhhhHhhhcccchhHHHHH
Confidence 158999999999999988865 4899999999988422 1112111111 111100 0
Q ss_pred CC--cccCceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 142 EH--YWLGAVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 142 ~~--~~~~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
.. ...-+...+|+|+++++++.. ...+|. ..++|.
T Consensus 212 ~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG 251 (255)
T d1gega_ 212 AKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG 251 (255)
T ss_dssp HTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred HhcCCCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCC
Confidence 00 011366799999999999853 334664 456553
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=98.51 E-value=6.7e-07 Score=66.91 Aligned_cols=147 Identities=17% Similarity=0.128 Sum_probs=92.3
Q ss_pred CeEEEeecCCCCCC-C---CCchhhhHHHHHHHHHHHHHHHH----HcCCC-EEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDD-P---KDPEKELLIPAVQGTLNVLEAAK----KFGVR-RVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~-~---~~~~~~~~~~nv~~~~~l~~~~~----~~~~~-~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||...... . .+..+..+++|+.++..+.+++. +.+.. ++|++||..+..+.+.
T Consensus 84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~------------ 151 (251)
T d1zk4a1 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS------------ 151 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT------------
T ss_pred eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCC------------
Confidence 89999999976521 1 12235678999999999988864 23333 7899999754322211
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK-----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+-.+..... ............ .+ ..
T Consensus 152 ---------~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~~----~p--l~ 214 (251)
T d1zk4a1 152 ---------LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL--PGAEEAMSQRTK----TP--MG 214 (251)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS--TTHHHHHTSTTT----CT--TS
T ss_pred ---------chhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhc--CCHHHHHHHHhC----CC--CC
Confidence 148999999999998877643 479999999998853321110 001111111111 11 11
Q ss_pred CceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 147 GAVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
-+...+|+|+++++++.. ...+|. +.++|.
T Consensus 215 R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG 247 (251)
T d1zk4a1 215 HIGEPNDIAYICVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhCCCcCcEEEECcc
Confidence 366899999999998854 335674 455543
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.50 E-value=2.7e-07 Score=68.70 Aligned_cols=148 Identities=19% Similarity=0.189 Sum_probs=94.1
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----c-CCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----F-GVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||..... ...+..+..+++|+.++..+.+++.. . +-.++|++||.+...+.+.
T Consensus 76 DilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~------------ 143 (242)
T d1cyda_ 76 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPN------------ 143 (242)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTT------------
T ss_pred eEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCc------------
Confidence 8999999986651 12223467789999999998886532 2 2348999999744222111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+ .|+++..+-||.+-.+.... ..........+....| ..-+
T Consensus 144 ---------~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~~~p------l~R~ 207 (242)
T d1cyda_ 144 ---------LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKK-VSADPEFARKLKERHP------LRKF 207 (242)
T ss_dssp ---------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHH-HTCCHHHHHHHHHHST------TSSC
T ss_pred ---------cccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHh-hcCCHHHHHHHHhcCC------CCCC
Confidence 158999999999999998865 48999999999885321100 0000122222222221 1135
Q ss_pred eeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
...+|+++++.+++.. ...+|. ..++|.
T Consensus 208 ~~peeva~~v~fL~S~~s~~itG~~i~vDGG 238 (242)
T d1cyda_ 208 AEVEDVVNSILFLLSDRSASTSGGGILVDAG 238 (242)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred cCHHHHHHHHHHHhCchhcCcCCceEEeCcc
Confidence 6799999999998854 335664 456554
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.49 E-value=9.7e-07 Score=65.28 Aligned_cols=146 Identities=13% Similarity=0.048 Sum_probs=92.4
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..++.+..+++|+.++..+.+++. +.+..++|++||.....+.+.
T Consensus 68 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~------------- 134 (234)
T d1o5ia_ 68 DILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIEN------------- 134 (234)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTT-------------
T ss_pred cEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccc-------------
Confidence 89999999765411 222335667899998888877653 344458999998744221111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCce
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+-.+..... ........+....| ..-+.
T Consensus 135 --------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~~p------l~R~~ 198 (234)
T d1o5ia_ 135 --------LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKEL--LSEEKKKQVESQIP------MRRMA 198 (234)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHH--SCHHHHHHHHTTST------TSSCB
T ss_pred --------cccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhh--cCHHHHHHHHhcCC------CCCCc
Confidence 148999999999998888765 389999999998854321110 00112222222221 11366
Q ss_pred eHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 150 HVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
..+|+|+++.+++.. ...+|. ..++|
T Consensus 199 ~pediA~~v~fL~S~~s~~itG~~i~vDG 227 (234)
T d1o5ia_ 199 KPEEIASVVAFLCSEKASYLTGQTIVVDG 227 (234)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CHHHHHHHHHHHhChhhcCCcCcEEEECc
Confidence 799999999998854 335675 45554
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=1.2e-06 Score=65.53 Aligned_cols=140 Identities=15% Similarity=0.097 Sum_probs=91.6
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHH----cC---CCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKK----FG---VRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~---~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|++||+||... ..+.++.+++|+.++.++.+++.. .+ ..++|++||.++..+.+.
T Consensus 84 DilVnnAg~~~----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~-------------- 145 (254)
T d2gdza1 84 DILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ-------------- 145 (254)
T ss_dssp CEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------------
T ss_pred Ceecccccccc----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCC--------------
Confidence 89999999976 466889999999988887777643 21 136999999855333222
Q ss_pred cccccccchhHHHHHHHHHHHHHH--HHH---HcCCcEEEEcCCCeeCCCCCCC--------C-ChhHHHHHHHHhCCCC
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWE--FAE---KNGTDVVAIHPATSLGPFPQPY--------V-NASGAVLQRLLQGSKD 139 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~--~~~---~~~~~~~ilR~~~i~G~~~~~~--------~-~~~~~~~~~~~~~~~~ 139 (232)
...|+.+|...+.+.+. ++. ..|+++..+.||.+--+..... . .....+...+..
T Consensus 146 -------~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~---- 214 (254)
T d2gdza1 146 -------QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY---- 214 (254)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHH----
T ss_pred -------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCC----
Confidence 14899999999998774 232 4589999999998842210000 0 000011111111
Q ss_pred ccCCcccCceeHHhHHHHHHHhhcCCCCCce-EEEec
Q 026820 140 TQEHYWLGAVHVKDVAKAQVLLFETSAASGR-YLCTN 175 (232)
Q Consensus 140 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-~~~~~ 175 (232)
.-+...+|+|++++.++.....+|. ..++|
T Consensus 215 ------~r~~~pedvA~~v~fL~s~~~itG~~i~VdG 245 (254)
T d2gdza1 215 ------YGILDPPLIANGLITLIEDDALNGAIMKITT 245 (254)
T ss_dssp ------HCCBCHHHHHHHHHHHHHCTTCSSCEEEEET
T ss_pred ------CCCcCHHHHHHHHHHHHcCCCCCCCEEEECC
Confidence 1256789999999999987767785 45654
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.44 E-value=2.1e-06 Score=64.41 Aligned_cols=149 Identities=19% Similarity=0.137 Sum_probs=93.9
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceecc-CCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVP-NPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~-~~~~~~~~~~~E~~~~~ 73 (232)
|++||+||..... ...+..+..+.+|+.+...+++++... .-.+.+.++|.+.... .+.
T Consensus 86 dilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~-------------- 151 (259)
T d1ja9a_ 86 DFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN-------------- 151 (259)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCS--------------
T ss_pred cEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCC--------------
Confidence 7899999987652 122234678899999999999887653 1235666665433221 111
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCC----------CCCCCCChhHHHHHHHHhCCCCc
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGP----------FPQPYVNASGAVLQRLLQGSKDT 140 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~----------~~~~~~~~~~~~~~~~~~~~~~~ 140 (232)
...|+.+|...+.+.+.++.+ .|+++.++.||.+-.+ ...........+...+....+.
T Consensus 152 -------~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl- 223 (259)
T d1ja9a_ 152 -------HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL- 223 (259)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT-
T ss_pred -------chhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC-
Confidence 148999999999999998865 4899999999998421 0011111112222333333221
Q ss_pred cCCcccCceeHHhHHHHHHHhhcCCC--CCce-EEEecC
Q 026820 141 QEHYWLGAVHVKDVAKAQVLLFETSA--ASGR-YLCTNG 176 (232)
Q Consensus 141 ~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~-~~~~~~ 176 (232)
.-+...+|+++++.+++.... .+|. ..++|.
T Consensus 224 -----~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG 257 (259)
T d1ja9a_ 224 -----KRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 257 (259)
T ss_dssp -----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -----CCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCC
Confidence 236779999999999996543 5664 466654
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.42 E-value=1.8e-06 Score=64.61 Aligned_cols=145 Identities=19% Similarity=0.122 Sum_probs=91.8
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||...... ..++.+..+++|+.++..+.+++.. .+ .++|++||.++..+.+.
T Consensus 82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~~------------- 147 (253)
T d1hxha_ 82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQ------------- 147 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTT-------------
T ss_pred CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCccc-------------
Confidence 89999999876511 2223467889999998888877643 23 58999999855322211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCeeCCCCCCCCChhHHHH-----HHHHhCCCCccC
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK-----NGTDVVAIHPATSLGPFPQPYVNASGAVL-----QRLLQGSKDTQE 142 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 142 (232)
...|+.+|...+.+.+.++.+ +++++..+-||.+-.+. ....+ .+.........
T Consensus 148 --------~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~-------~~~~~~~~~~~~~~~~~~~~~- 211 (253)
T d1hxha_ 148 --------YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM-------MQASLPKGVSKEMVLHDPKLN- 211 (253)
T ss_dssp --------BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH-------HHHHSCTTCCHHHHBCBTTTB-
T ss_pred --------cccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh-------HHhhCcchhhHHHHHhCcccc-
Confidence 158999999999998877654 25889999999885321 10000 01111110000
Q ss_pred CcccCceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 143 HYWLGAVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
..-.+...+|+|+++++++.. ...+|. ..++|.
T Consensus 212 -~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 212 -RAGRAYMPERIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp -TTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred -ccCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence 011367789999999998854 335675 466554
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.42 E-value=9.3e-07 Score=65.84 Aligned_cols=148 Identities=15% Similarity=0.058 Sum_probs=95.1
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEeccccee-ccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSI-VPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~-~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||..... ...+..+..+++|+.++..+.+++.. .+-.++|++||.... .+.
T Consensus 76 d~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~-------------- 141 (245)
T d2ag5a1 76 DVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV-------------- 141 (245)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC--------------
T ss_pred eeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCc--------------
Confidence 7899999997661 12223467778999999988887653 344589999986331 110
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCC---CCChhHHHHHHHHhCCCCccCCcc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQP---YVNASGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 145 (232)
+....|+.+|...+.+++.++.+ .|+++..+.||.+-.+.... ...........+....| .
T Consensus 142 -------~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p------l 208 (245)
T d2ag5a1 142 -------VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK------T 208 (245)
T ss_dssp -------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT------T
T ss_pred -------cchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCC------C
Confidence 01158999999999999998875 38999999999886432110 00011112222222221 1
Q ss_pred cCceeHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 146 LGAVHVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
.-+...+|+++++..++.. ...+|. ..++|
T Consensus 209 ~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDG 241 (245)
T d2ag5a1 209 GRFATAEEIAMLCVYLASDESAYVTGNPVIIDG 241 (245)
T ss_dssp SSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred CCCcCHHHHHHHHHHHhChhhCCCcCceEEeCC
Confidence 1367899999999999964 345675 45554
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.40 E-value=1.5e-06 Score=65.08 Aligned_cols=147 Identities=14% Similarity=0.073 Sum_probs=91.4
Q ss_pred CeEEEeecCCCC--------CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTL--------DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||.... .....+....+++|+.++..+++++... .-.++|++||..+..+.+.
T Consensus 88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~----------- 156 (256)
T d1ulua_ 88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPK----------- 156 (256)
T ss_dssp EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTT-----------
T ss_pred eEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCC-----------
Confidence 789999987532 0111123457789999999999887643 1247999998755322211
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccC
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLG 147 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+..+..... .........+.+..|. .-
T Consensus 157 ----------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~-~~~~~~~~~~~~~~pl------~R 219 (256)
T d1ulua_ 157 ----------YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI-PGFTKMYDRVAQTAPL------RR 219 (256)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------CHHHHHHHHHHSTT------SS
T ss_pred ----------chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccch-hhhHHHHHHHHhcCCC------CC
Confidence 158999999999999998875 489999999999865443221 1112233333332221 12
Q ss_pred ceeHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 148 AVHVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
+...+|+|+++.+++.. .-.+|. ..++|
T Consensus 220 ~~~pedvA~~v~fL~S~~s~~itG~~i~VDG 250 (256)
T d1ulua_ 220 NITQEEVGNLGLFLLSPLASGITGEVVYVDA 250 (256)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CcCHHHHHHHHHHHhCchhCCccCCeEEECc
Confidence 56789999999999864 335674 45554
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.34 E-value=1.4e-06 Score=66.81 Aligned_cols=148 Identities=11% Similarity=0.013 Sum_probs=92.1
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||..... ...+..+..+++|+.++..+.+++.. .+..++|++||. ...+.+.
T Consensus 96 DiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~-~~~~~~~------------- 161 (297)
T d1yxma1 96 NFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGFPL------------- 161 (297)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTTCCTT-------------
T ss_pred EEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccc-ccccccc-------------
Confidence 7999999986541 12223467789999999998887643 233467777653 2111111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChh-HHHHHHHHhCCCCccCCcccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNAS-GAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+. |+++..+.||.|..+......... ..+........ + ..-+
T Consensus 162 --------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~----p--lgR~ 227 (297)
T d1yxma1 162 --------AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI----P--AKRI 227 (297)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS----T--TSSC
T ss_pred --------cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcC----C--CCCC
Confidence 1489999999999999988654 899999999998654321111111 01111111110 1 1135
Q ss_pred eeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
...+|+|+++++++.. .-.+|. ..++|.
T Consensus 228 g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG 258 (297)
T d1yxma1 228 GVPEEVSSVVCFLLSPAASFITGQSVDVDGG 258 (297)
T ss_dssp BCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHhCchhcCcCCcEEEeCcC
Confidence 6789999999999954 345675 466553
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.32 E-value=7.2e-06 Score=61.56 Aligned_cols=148 Identities=16% Similarity=0.148 Sum_probs=86.3
Q ss_pred CeEEEeecCCCCCC--------CCCchhhhHHHHHHHHHHHHHHHHHc---CCCEEEEecccce-eccCCCCCCCCccCC
Q 026820 1 MGVFHLASPNTLDD--------PKDPEKELLIPAVQGTLNVLEAAKKF---GVRRVVLTSSISS-IVPNPNWPQGKVIDE 68 (232)
Q Consensus 1 D~Vih~a~~~~~~~--------~~~~~~~~~~~nv~~~~~l~~~~~~~---~~~~~i~~Ss~~~-~~~~~~~~~~~~~~E 68 (232)
|++||+||...... ..+..+..+++|+.++..+.+++... +-..+|.++|+.. ..+.+.
T Consensus 87 DilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~--------- 157 (264)
T d1spxa_ 87 DILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPD--------- 157 (264)
T ss_dssp CEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTT---------
T ss_pred CEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCC---------
Confidence 89999999753211 11234567889999998888876532 1135666665433 222111
Q ss_pred CCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCC------CChhHHHHHHHHhCCCC
Q 026820 69 TSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPY------VNASGAVLQRLLQGSKD 139 (232)
Q Consensus 69 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~------~~~~~~~~~~~~~~~~~ 139 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+--+..... ..........+...-|.
T Consensus 158 ------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl 225 (264)
T d1spxa_ 158 ------------FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA 225 (264)
T ss_dssp ------------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT
T ss_pred ------------chhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC
Confidence 147999999999999988765 489999999999854321110 00111112222221111
Q ss_pred ccCCcccCceeHHhHHHHHHHhhcC---CCCCce-EEEec
Q 026820 140 TQEHYWLGAVHVKDVAKAQVLLFET---SAASGR-YLCTN 175 (232)
Q Consensus 140 ~~~~~~~~~i~v~D~a~~~~~~~~~---~~~~~~-~~~~~ 175 (232)
.-+...+|+|+++++++.. .-.+|. ..++|
T Consensus 226 ------~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDG 259 (264)
T d1spxa_ 226 ------GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDG 259 (264)
T ss_dssp ------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred ------CCCcCHHHHHHHHHHHhCCcccCCccCceEEeCC
Confidence 1256789999999998853 235775 45554
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.25 E-value=2.7e-06 Score=63.08 Aligned_cols=144 Identities=19% Similarity=0.179 Sum_probs=92.9
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|++||+|+...... ..+.....++.|+.+...+.+++... .-+.++.+||. +... .+
T Consensus 81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~-a~~~----------------~~ 143 (241)
T d2a4ka1 81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV-AGLG----------------AF 143 (241)
T ss_dssp CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC-TTCC----------------HH
T ss_pred cEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccc-cccc----------------cc
Confidence 78999999865511 11223577889999999999987654 32345555543 2110 01
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeH
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHV 151 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 151 (232)
. ...|+.+|...|.+.+.++++. |+++.++.||.+-.+... ........++.+..+. .-+...
T Consensus 144 ~-----~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~---~~~~~~~~~~~~~~p~------~r~~~p 209 (241)
T d2a4ka1 144 G-----LAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA---GLPPWAWEQEVGASPL------GRAGRP 209 (241)
T ss_dssp H-----HHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT---TSCHHHHHHHHHTSTT------CSCBCH
T ss_pred C-----ccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHH---hhhHhHHHHHHhCCCC------CCCcCH
Confidence 1 2579999999999999998764 799999999988433211 1223334444443321 135679
Q ss_pred HhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 152 KDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 152 ~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
+|+|+++..++.. .-.+|. ..++|
T Consensus 210 ~dva~~v~fL~S~~s~~itG~~i~vDG 236 (241)
T d2a4ka1 210 EEVAQAALFLLSEESAYITGQALYVDG 236 (241)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHHhcchhCCCcCceEEeCC
Confidence 9999999999964 335664 45554
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.25 E-value=1.2e-05 Score=60.58 Aligned_cols=150 Identities=18% Similarity=0.066 Sum_probs=91.8
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCCc
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDL 74 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~ 74 (232)
|+++|++|..... .........++.|+.++..+.+++... .-.+.++++|.....+...
T Consensus 98 dilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~--------------- 162 (272)
T d1g0oa_ 98 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVP--------------- 162 (272)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCS---------------
T ss_pred CccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccccc---------------
Confidence 7899999987651 112233567788999999999988653 2246777777533111110
Q ss_pred ccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCC--------CCCCCChhHHHHHH--HHhCCCCcc
Q 026820 75 DFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPF--------PQPYVNASGAVLQR--LLQGSKDTQ 141 (232)
Q Consensus 75 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~--------~~~~~~~~~~~~~~--~~~~~~~~~ 141 (232)
....|+.+|...+.+.+.++.+ .|+++..+.||.+-.+. .............. .....|.
T Consensus 163 -----~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-- 235 (272)
T d1g0oa_ 163 -----KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL-- 235 (272)
T ss_dssp -----SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT--
T ss_pred -----chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC--
Confidence 1147999999999999988865 48999999999984321 00000011111111 1111111
Q ss_pred CCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEecC
Q 026820 142 EHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 142 ~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~~ 176 (232)
.-+...+|+|+++..++... ..+|. ..++|.
T Consensus 236 ----gR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG 269 (272)
T d1g0oa_ 236 ----RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG 269 (272)
T ss_dssp ----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ----CCCcCHHHHHHHHHHHhCchhcCccCceEeECCC
Confidence 13677999999999999643 34664 455543
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.25 E-value=2.8e-06 Score=62.71 Aligned_cols=126 Identities=17% Similarity=0.171 Sum_probs=82.9
Q ss_pred CeEEEeecCCCC-CC-CCC---chhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTL-DD-PKD---PEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~-~~-~~~---~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|++||+||.... .. ... ..+..+++|+.++..+++++... .-.++|++||.+...+.+.
T Consensus 73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~-------------- 138 (235)
T d1ooea_ 73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPS-------------- 138 (235)
T ss_dssp EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT--------------
T ss_pred eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCccc--------------
Confidence 789999997443 11 122 23456789999999999887653 2248999999755333221
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHHc-----CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEKN-----GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+. ++.+..+.|+.+-- . +.++..... ....+
T Consensus 139 -------~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T--------~---~~~~~~~~~------~~~~~ 194 (235)
T d1ooea_ 139 -------MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDT--------P---MNRKWMPNA------DHSSW 194 (235)
T ss_dssp -------BHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCC--------H---HHHHHSTTC------CGGGC
T ss_pred -------ccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcC--------c---chhhhCcCC------ccccC
Confidence 1589999999999999987653 66777788887631 1 222222111 12356
Q ss_pred eeHHhHHHHHHHhhcC
Q 026820 149 VHVKDVAKAQVLLFET 164 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~ 164 (232)
+..+|+++.++..+..
T Consensus 195 ~~~~~va~~~~~~l~~ 210 (235)
T d1ooea_ 195 TPLSFISEHLLKWTTE 210 (235)
T ss_dssp BCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhcC
Confidence 7899999998765533
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.19 E-value=1.7e-05 Score=59.91 Aligned_cols=147 Identities=16% Similarity=0.069 Sum_probs=90.1
Q ss_pred CeEEEeecCCCCCCC-----CC----chhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccC
Q 026820 1 MGVFHLASPNTLDDP-----KD----PEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~~~~-----~~----~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~ 67 (232)
|++||+||....... .+ ..+..+++|+.++..+.+++. +.+ .++|++||..+..+.+.
T Consensus 81 dilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~-------- 151 (276)
T d1bdba_ 81 DTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGG-------- 151 (276)
T ss_dssp CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSS--------
T ss_pred ccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCC--------
Confidence 789999997644111 11 145778899999888887763 334 47888888744332211
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc--CCcEEEEcCCCeeCCCCCCCCC------hh-HHHHHHHHhCCC
Q 026820 68 ETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN--GTDVVAIHPATSLGPFPQPYVN------AS-GAVLQRLLQGSK 138 (232)
Q Consensus 68 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~i~G~~~~~~~~------~~-~~~~~~~~~~~~ 138 (232)
...|+.+|...+.+.+.++.+. ++++..+.||.|--+-...... .. ......+....|
T Consensus 152 -------------~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 218 (276)
T d1bdba_ 152 -------------GPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLP 218 (276)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCT
T ss_pred -------------CchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCC
Confidence 1489999999999999888654 5889999999885432111000 00 011111111111
Q ss_pred CccCCcccCceeHHhHHHHHHHhhc---CCCCCce-EEEec
Q 026820 139 DTQEHYWLGAVHVKDVAKAQVLLFE---TSAASGR-YLCTN 175 (232)
Q Consensus 139 ~~~~~~~~~~i~v~D~a~~~~~~~~---~~~~~~~-~~~~~ 175 (232)
. .-+...+|++.+++.++. ....+|. ..++|
T Consensus 219 l------gR~g~peeva~~v~fL~S~~~a~~itG~~i~VDG 253 (276)
T d1bdba_ 219 I------GRMPEVEEYTGAYVFFATRGDAAPATGALLNYDG 253 (276)
T ss_dssp T------SSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESS
T ss_pred C------CCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECc
Confidence 1 125568999999988774 2346775 46654
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.18 E-value=1.7e-05 Score=59.75 Aligned_cols=153 Identities=14% Similarity=0.138 Sum_probs=92.6
Q ss_pred CeEEEeecCCCCCC---C---CCchhhhHHHHHHHHHHHHHHHHH----cCCCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLDD---P---KDPEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~~---~---~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||...... . .+..+..+++|+.++..+.+++.. .+-.+++++||.+...+.+.
T Consensus 86 DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~----------- 154 (274)
T d1xhla_ 86 DILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSG----------- 154 (274)
T ss_dssp CEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTT-----------
T ss_pred eEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCC-----------
Confidence 89999999754311 1 122467789999999988887643 34346777777533222111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCC--CChhHHHHHHHHhCCCCccCCcc
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPY--VNASGAVLQRLLQGSKDTQEHYW 145 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 145 (232)
...|+.+|...+.+.+.++.+ .|+++..+.||.+-.+..... .........+.........| .
T Consensus 155 ----------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iP--l 222 (274)
T d1xhla_ 155 ----------YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP--V 222 (274)
T ss_dssp ----------SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT--T
T ss_pred ----------CceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCC--C
Confidence 147999999999999888765 489999999999854321100 01111222222221110011 1
Q ss_pred cCceeHHhHHHHHHHhhcC---CCCCce-EEEecC
Q 026820 146 LGAVHVKDVAKAQVLLFET---SAASGR-YLCTNG 176 (232)
Q Consensus 146 ~~~i~v~D~a~~~~~~~~~---~~~~~~-~~~~~~ 176 (232)
.-+...+|+|+++++++.. .-.+|. ..++|.
T Consensus 223 gR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG 257 (274)
T d1xhla_ 223 GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGG 257 (274)
T ss_dssp SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcC
Confidence 1256799999999998852 346775 566553
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.17 E-value=5.5e-06 Score=61.97 Aligned_cols=136 Identities=14% Similarity=0.073 Sum_probs=83.9
Q ss_pred CeEEEeecCCCCCC----CCCchhhhHHHHHHHHHHHHHHHH----HcC--CCEEEEecccceeccCCCCCCCCccCCCC
Q 026820 1 MGVFHLASPNTLDD----PKDPEKELLIPAVQGTLNVLEAAK----KFG--VRRVVLTSSISSIVPNPNWPQGKVIDETS 70 (232)
Q Consensus 1 D~Vih~a~~~~~~~----~~~~~~~~~~~nv~~~~~l~~~~~----~~~--~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~ 70 (232)
|++||+||...... ..+..+..++.|+.+...+.+++. +.+ -.++|++||++...+.+.
T Consensus 91 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~----------- 159 (257)
T d1xg5a_ 91 DICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL----------- 159 (257)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC-----------
T ss_pred CEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC-----------
Confidence 79999999876522 222346777889888888776653 333 358999999744111111
Q ss_pred CCCcccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCeeCCCCCC-CCChhHHHHHHHHhCCCCccCCc
Q 026820 71 WTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK-----NGTDVVAIHPATSLGPFPQP-YVNASGAVLQRLLQGSKDTQEHY 144 (232)
Q Consensus 71 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 144 (232)
.. ...|+.+|...+.+.+.++.+ .++.+.++-||.+=.+.... ............ .
T Consensus 160 --~~------~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~----------~ 221 (257)
T d1xg5a_ 160 --SV------THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATY----------E 221 (257)
T ss_dssp --GG------GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHH----------C
T ss_pred --cc------cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcC----------C
Confidence 01 147999999999999888753 47889999988763221000 000011111111 1
Q ss_pred ccCceeHHhHHHHHHHhhcCC
Q 026820 145 WLGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 145 ~~~~i~v~D~a~~~~~~~~~~ 165 (232)
...++..+|+|++++.++..+
T Consensus 222 ~~r~~~pedvA~~v~fL~s~~ 242 (257)
T d1xg5a_ 222 QMKCLKPEDVAEAVIYVLSTP 242 (257)
T ss_dssp ---CBCHHHHHHHHHHHHHSC
T ss_pred CCCCcCHHHHHHHHHHHhCCh
Confidence 123678999999999998665
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.16 E-value=1.2e-05 Score=60.10 Aligned_cols=138 Identities=12% Similarity=0.019 Sum_probs=85.3
Q ss_pred CeEEEeecCCCCC----CCC---CchhhhHHHHHHHHHHHHHHHHHc----C--CCEEEEecccceeccCCCCCCCCccC
Q 026820 1 MGVFHLASPNTLD----DPK---DPEKELLIPAVQGTLNVLEAAKKF----G--VRRVVLTSSISSIVPNPNWPQGKVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~---~~~~~~~~~nv~~~~~l~~~~~~~----~--~~~~i~~Ss~~~~~~~~~~~~~~~~~ 67 (232)
|+++|.||..... ... +..+..+++|+.++..+.+++... + ..++|++||..+..+.+.
T Consensus 94 ~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~~-------- 165 (259)
T d1oaaa_ 94 LLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKG-------- 165 (259)
T ss_dssp EEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTT--------
T ss_pred EEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCcc--------
Confidence 4789998875421 111 224567889999999999988643 2 237999999755332221
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHHHHc-CCcEEEEcCCCeeCCCCCCC--CChhHHHHHHHHhCCCCccCCc
Q 026820 68 ETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN-GTDVVAIHPATSLGPFPQPY--VNASGAVLQRLLQGSKDTQEHY 144 (232)
Q Consensus 68 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 144 (232)
...|+.+|...+.+.+.++.+. |+++..+.||.+-.+..... ..........+.... .
T Consensus 166 -------------~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~------~ 226 (259)
T d1oaaa_ 166 -------------WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK------S 226 (259)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH------H
T ss_pred -------------chHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcC------C
Confidence 1589999999999999887654 88999999998853210000 000000111110000 0
Q ss_pred ccCceeHHhHHHHHHHhhcCC
Q 026820 145 WLGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 145 ~~~~i~v~D~a~~~~~~~~~~ 165 (232)
.--+...+|+|++++.++...
T Consensus 227 ~~r~~~p~evA~~i~~ll~~~ 247 (259)
T d1oaaa_ 227 DGALVDCGTSAQKLLGLLQKD 247 (259)
T ss_dssp TTCSBCHHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHhhhc
Confidence 113567999999999888543
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.12 E-value=3.4e-05 Score=58.03 Aligned_cols=151 Identities=15% Similarity=0.144 Sum_probs=88.3
Q ss_pred CeEEEeecCCCCCCCC-----C---chhhhHHHHHHHHHHHHHHHHH----cCCCEEEEeccc-ceeccCCCCCCCCccC
Q 026820 1 MGVFHLASPNTLDDPK-----D---PEKELLIPAVQGTLNVLEAAKK----FGVRRVVLTSSI-SSIVPNPNWPQGKVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~-----~---~~~~~~~~nv~~~~~l~~~~~~----~~~~~~i~~Ss~-~~~~~~~~~~~~~~~~ 67 (232)
|++||+||........ . .....+++|+.++..+.+++.. .+ ..+|.++|+ +...+.+.
T Consensus 87 DilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~~~-------- 157 (272)
T d1xkqa_ 87 DVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPD-------- 157 (272)
T ss_dssp CEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCS--------
T ss_pred eEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCCCC--------
Confidence 8999999987542111 1 1355678999999888887643 33 245555553 22211111
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCC--ChhHHHHHHHHhCCCCccC
Q 026820 68 ETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYV--NASGAVLQRLLQGSKDTQE 142 (232)
Q Consensus 68 E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~ 142 (232)
...|+.+|...+.+.+.++.+ .|+++..+-||.|-.+...... ..................|
T Consensus 158 -------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~P 224 (272)
T d1xkqa_ 158 -------------FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIP 224 (272)
T ss_dssp -------------SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT
T ss_pred -------------cchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCC
Confidence 148999999999999988865 4899999999988533211000 0111111111111100011
Q ss_pred CcccCceeHHhHHHHHHHhhcC---CCCCce-EEEec
Q 026820 143 HYWLGAVHVKDVAKAQVLLFET---SAASGR-YLCTN 175 (232)
Q Consensus 143 ~~~~~~i~v~D~a~~~~~~~~~---~~~~~~-~~~~~ 175 (232)
..-+...+|+|+++++++.. .-.+|. ..++|
T Consensus 225 --lgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDG 259 (272)
T d1xkqa_ 225 --IGAAGKPEHIANIILFLADRNLSFYILGQSIVADG 259 (272)
T ss_dssp --TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEEST
T ss_pred --CCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCc
Confidence 11266799999999999853 236775 45654
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.10 E-value=3.6e-05 Score=58.46 Aligned_cols=149 Identities=15% Similarity=0.055 Sum_probs=89.3
Q ss_pred CeEEEeecCCCCCCCC----CchhhhHHHHHHHHHHHHHHHH----Hc-CCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLDDPK----DPEKELLIPAVQGTLNVLEAAK----KF-GVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~----~~~~~~~~~nv~~~~~l~~~~~----~~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||........ ......+..|..+...+...+. .. +...++.+||.....+.+.
T Consensus 105 DilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~------------ 172 (294)
T d1w6ua_ 105 NIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGF------------ 172 (294)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTT------------
T ss_pred chhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccc------------
Confidence 7899999987651111 1234556777777666665432 22 3345777776533222111
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.+|...+.+.+.++.+ .|+++.++.||.+-.+....................+. .-+
T Consensus 173 ---------~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl------~R~ 237 (294)
T d1w6ua_ 173 ---------VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC------GRL 237 (294)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT------SSC
T ss_pred ---------cchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCC------CCC
Confidence 147999999999999988865 48999999999996543222111122233333333221 135
Q ss_pred eeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
...+|+|+++..++.. ...+|. ..++|.
T Consensus 238 ~~pediA~~v~fL~sd~s~~itG~~i~vDGG 268 (294)
T d1w6ua_ 238 GTVEELANLAAFLCSDYASWINGAVIKFDGG 268 (294)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence 5789999999999854 335774 456553
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.08 E-value=1.4e-06 Score=64.75 Aligned_cols=125 Identities=14% Similarity=-0.004 Sum_probs=83.8
Q ss_pred CeEEEeecCCCCCCCCC----chhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTLDDPKD----PEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||........+ ..+..+++|+.++..+++++. +.+-.++|++||..+..+.
T Consensus 86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~--------------- 150 (244)
T d1yb1a_ 86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV--------------- 150 (244)
T ss_dssp SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH---------------
T ss_pred ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC---------------
Confidence 78999999987622222 235778999999888887653 4455689999998542211
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH------cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK------NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
+ ....|+.||...+.+.+.++.+ .|+.+.++.||.+--+.... . .. ...
T Consensus 151 -~-----~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~---~----~~------------~~~ 205 (244)
T d1yb1a_ 151 -P-----FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN---P----ST------------SLG 205 (244)
T ss_dssp -H-----HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC---T----HH------------HHC
T ss_pred -C-----CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC---c----Cc------------ccc
Confidence 1 1258999999999999888764 37899999999773221110 0 00 011
Q ss_pred CceeHHhHHHHHHHhhcCC
Q 026820 147 GAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~~ 165 (232)
..+..+|+++.+...+...
T Consensus 206 ~~~~pe~va~~i~~~~~~~ 224 (244)
T d1yb1a_ 206 PTLEPEEVVNRLMHGILTE 224 (244)
T ss_dssp CCCCHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHhcC
Confidence 3456889999988877554
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=98.07 E-value=4.1e-05 Score=56.97 Aligned_cols=148 Identities=16% Similarity=0.066 Sum_probs=90.9
Q ss_pred CeEEEeecCCCCCCC-CCc--------hhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCC
Q 026820 1 MGVFHLASPNTLDDP-KDP--------EKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDET 69 (232)
Q Consensus 1 D~Vih~a~~~~~~~~-~~~--------~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~ 69 (232)
|+++|+++....... ... .......|+.+...+.+++... +-+.+|++||.+...+.+.
T Consensus 85 d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~---------- 154 (258)
T d1qsga_ 85 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPN---------- 154 (258)
T ss_dssp EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTT----------
T ss_pred ceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCC----------
Confidence 578888887654111 111 1234456666777777776553 2246888888754332221
Q ss_pred CCCCcccccccchhHHHHHHHHHHHHHHHHHHc---CCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 70 SWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKN---GTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 70 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
...|+.+|...+.+.+.++.+. |+++.++.||.|..+..... ..............|. .
T Consensus 155 -----------~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~-~~~~~~~~~~~~~~pl------~ 216 (258)
T d1qsga_ 155 -----------YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KDFRKMLAHCEAVTPI------R 216 (258)
T ss_dssp -----------TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHSTT------S
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccccc-chhhhHHHHHHhCCCC------C
Confidence 1489999999999999988754 79999999999975543221 1222222232222221 1
Q ss_pred CceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 147 GAVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
-+...+|++.++..++.. ...+|. ..++|.
T Consensus 217 R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG 249 (258)
T d1qsga_ 217 RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG 249 (258)
T ss_dssp SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhcCccCceEEECcC
Confidence 256799999999999954 346675 455543
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.06 E-value=3.8e-06 Score=62.06 Aligned_cols=126 Identities=13% Similarity=0.096 Sum_probs=86.0
Q ss_pred CeEEEeecCCCC-CCCCC----chhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTL-DDPKD----PEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~-~~~~~----~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|++||+||.... ..... ..+..++.|+.++.++.+++... .-.++|++||.++..+.+.
T Consensus 73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~-------------- 138 (236)
T d1dhra_ 73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPG-------------- 138 (236)
T ss_dssp EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTT--------------
T ss_pred eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccC--------------
Confidence 789999996433 11112 23456799999999999887653 2248999999754322211
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCc-ccC
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK-----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHY-WLG 147 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 147 (232)
...|+.||...+.+.+.++.+ .|+.+..+.||.+.-+ +.++.. ++. .-.
T Consensus 139 -------~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~-----------~~~~~~-------~~~~~~~ 193 (236)
T d1dhra_ 139 -------MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP-----------MNRKSM-------PEADFSS 193 (236)
T ss_dssp -------BHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH-----------HHHHHS-------TTSCGGG
T ss_pred -------CcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC-----------cchhhC-------ccchhhc
Confidence 158999999999999998754 3789999999988532 111111 111 124
Q ss_pred ceeHHhHHHHHHHhhcCC
Q 026820 148 AVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 148 ~i~v~D~a~~~~~~~~~~ 165 (232)
++..+|+++.+..++...
T Consensus 194 ~~~pe~va~~~~~l~s~~ 211 (236)
T d1dhra_ 194 WTPLEFLVETFHDWITGN 211 (236)
T ss_dssp SEEHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHhCCC
Confidence 678999999999988543
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.03 E-value=3.6e-05 Score=57.02 Aligned_cols=122 Identities=18% Similarity=0.091 Sum_probs=79.5
Q ss_pred hhhhHHHHHHHHHHHHHHHHHc----------CCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccchhHHHHH
Q 026820 19 EKELLIPAVQGTLNVLEAAKKF----------GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSK 88 (232)
Q Consensus 19 ~~~~~~~nv~~~~~l~~~~~~~----------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK 88 (232)
.+..+++|+.++.++.+++... +-.++|++||.++..+.+. ...|+.+|
T Consensus 109 ~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~---------------------~~~Y~asK 167 (248)
T d2o23a1 109 FQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG---------------------QAAYSASK 167 (248)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT---------------------CHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCC---------------------chHHHHHH
Confidence 4577899999999999887542 1227999999855433222 14899999
Q ss_pred HHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHHhhcCC
Q 026820 89 TLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETS 165 (232)
Q Consensus 89 ~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 165 (232)
...+.+.+.++.+ .|+++..+.||.+-.+.... ........+....+. ..-+...+|+|+++..+++.+
T Consensus 168 aal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~pl-----~~R~g~peevA~~v~fL~s~~ 239 (248)
T d2o23a1 168 GGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS---LPEKVCNFLASQVPF-----PSRLGDPAEYAHLVQAIIENP 239 (248)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------CHHHHTCSS-----SCSCBCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHhcccCcceeeeccCceecchhhc---CCHHHHHHHHhcCCC-----CCCCcCHHHHHHHHHHHHhCC
Confidence 9999999998875 38999999999885432111 111111122222111 012567999999999998765
Q ss_pred CCCc
Q 026820 166 AASG 169 (232)
Q Consensus 166 ~~~~ 169 (232)
-.+|
T Consensus 240 ~itG 243 (248)
T d2o23a1 240 FLNG 243 (248)
T ss_dssp TCCS
T ss_pred CCCc
Confidence 5555
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=97.99 E-value=3.5e-05 Score=57.54 Aligned_cols=153 Identities=17% Similarity=0.148 Sum_probs=92.3
Q ss_pred CeEEEeecCCCCC----CCCCchhhhHHHHHHHHHHHHHHHHH----c-CCCEEEEecccceeccCCCCCCCCccCCCCC
Q 026820 1 MGVFHLASPNTLD----DPKDPEKELLIPAVQGTLNVLEAAKK----F-GVRRVVLTSSISSIVPNPNWPQGKVIDETSW 71 (232)
Q Consensus 1 D~Vih~a~~~~~~----~~~~~~~~~~~~nv~~~~~l~~~~~~----~-~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~ 71 (232)
|++||+||..... ...++.+..+++|+.++..+.+++.. . +-..++..||... ..... ....
T Consensus 89 DilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~-~~~~~------~~~~-- 159 (260)
T d1h5qa_ 89 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSS-QIINQ------SSLN-- 159 (260)
T ss_dssp EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG-TSCCE------EETT--
T ss_pred cEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccc-ccccc------cccc--
Confidence 7899999986541 12223467789999998888876532 2 3335666665422 11110 0000
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 72 TDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 72 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
..+....|+.+|...+.+.+.++.+ .|+++.++-||.+-.+.... ........+....|. .-+
T Consensus 160 -----~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~pl------~R~ 225 (260)
T d1h5qa_ 160 -----GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH---MDKKIRDHQASNIPL------NRF 225 (260)
T ss_dssp -----EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG---SCHHHHHHHHHTCTT------SSC
T ss_pred -----cCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc---cCHHHHHHHHhcCCC------CCC
Confidence 0111258999999999999988764 48999999999985432111 112333333333221 125
Q ss_pred eeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
...+|+|++++.++.. ...+|. ..++|.
T Consensus 226 g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 256 (260)
T d1h5qa_ 226 AQPEEMTGQAILLLSDHATYMTGGEYFIDGG 256 (260)
T ss_dssp BCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred cCHHHHHHHHHHHhcchhCCCcCceEEECCC
Confidence 6699999999998854 335674 466654
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.96 E-value=6.8e-05 Score=57.91 Aligned_cols=94 Identities=10% Similarity=-0.012 Sum_probs=65.8
Q ss_pred CeEEEeecCCCC------CCCCCchhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL------DDPKDPEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||.... ....+.....+++|+.++..+++++... .-.++|.+||.+...+.+.
T Consensus 115 DilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~~~~p~------------- 181 (329)
T d1uh5a_ 115 NMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPG------------- 181 (329)
T ss_dssp EEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTT-------------
T ss_pred CeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccccccccceeehhcccccc-------------
Confidence 789999987543 1122234567788988888888887654 2247888888644211111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHHH----cCCcEEEEcCCCe
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAEK----NGTDVVAIHPATS 114 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR~~~i 114 (232)
. ...|+.+|...|.+.+.++.+ +|+++..+.||.|
T Consensus 182 -y------~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i 220 (329)
T d1uh5a_ 182 -Y------GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL 220 (329)
T ss_dssp -C------TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred -c------chhhhhhhccccccchhhHHHHhcccCcEEEEEecCcc
Confidence 0 137999999999998888753 4899999999976
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=97.93 E-value=0.00022 Score=53.58 Aligned_cols=144 Identities=13% Similarity=0.005 Sum_probs=88.2
Q ss_pred CeEEEeecCCCCCCCCCc-h-----------------hhhHHHHHHHHHHHHHHHHHc----------CCCEEEEecccc
Q 026820 1 MGVFHLASPNTLDDPKDP-E-----------------KELLIPAVQGTLNVLEAAKKF----------GVRRVVLTSSIS 52 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~-~-----------------~~~~~~nv~~~~~l~~~~~~~----------~~~~~i~~Ss~~ 52 (232)
|++||+||.......... . ...+.+|+.+...+.+++... +..++|.++|..
T Consensus 100 DiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~~ 179 (284)
T d1e7wa_ 100 DVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 179 (284)
T ss_dssp CEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTT
T ss_pred CEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHHhcCCCCccccccccc
Confidence 799999998765211111 1 125678888888888775431 223577777653
Q ss_pred eeccCCCCCCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHH
Q 026820 53 SIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAV 129 (232)
Q Consensus 53 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~ 129 (232)
...+... ...|+.+|...+.+.+.++.+ .|+++..+-||.+-... ......
T Consensus 180 ~~~~~~~---------------------~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~-----~~~~~~ 233 (284)
T d1e7wa_ 180 TNQPLLG---------------------YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-----DMPPAV 233 (284)
T ss_dssp TTSCCTT---------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-----GSCHHH
T ss_pred ccCCccc---------------------eeeeccccccchhhhHHHHHHhCCccccccccccccccccc-----cCCHHH
Confidence 2111111 148999999999999998865 48999999998642211 122233
Q ss_pred HHHHHhCCCCccCCcccCceeHHhHHHHHHHhhcCC--CCCce-EEEec
Q 026820 130 LQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETS--AASGR-YLCTN 175 (232)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~-~~~~~ 175 (232)
........+. . .-+...+|+++++++++... -.+|. ..++|
T Consensus 234 ~~~~~~~~pl-~----~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDG 277 (284)
T d1e7wa_ 234 WEGHRSKVPL-Y----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG 277 (284)
T ss_dssp HHHHHTTCTT-T----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHHhcCCC-C----CCCCCHHHHHHHHHHHhCchhcCccCCeEEECc
Confidence 3343333221 1 12557999999999998543 35675 45654
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.91 E-value=0.00016 Score=54.74 Aligned_cols=149 Identities=13% Similarity=0.056 Sum_probs=91.9
Q ss_pred CeEEEeecCCCC------CCCCCchhhhHHHHHHHHHHHHHHHHHcCC--CEEEEecccceeccCCCCCCCCccCCCCCC
Q 026820 1 MGVFHLASPNTL------DDPKDPEKELLIPAVQGTLNVLEAAKKFGV--RRVVLTSSISSIVPNPNWPQGKVIDETSWT 72 (232)
Q Consensus 1 D~Vih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~--~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~ 72 (232)
|++||+||.... ....+.....+++|+.+...+++++...-. ...+.+++.+.......
T Consensus 121 DilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------------- 187 (297)
T d1d7oa_ 121 DILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIPG------------- 187 (297)
T ss_dssp EEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTT-------------
T ss_pred cccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcceeeeehhhcccccc-------------
Confidence 789999997532 111222456778999999999998875421 23455555423111111
Q ss_pred CcccccccchhHHHHHHHHHHHHHHHHH----HcCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 73 DLDFCKSHKIWYSMSKTLAEKAAWEFAE----KNGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 73 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
....|..+|...+.+....+. +.|+++..+.||.+-.+.... ......+........|. .-+
T Consensus 188 -------~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~-~~~~~~~~~~~~~~~Pl------gR~ 253 (297)
T d1d7oa_ 188 -------YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKA-IGFIDTMIEYSYNNAPI------QKT 253 (297)
T ss_dssp -------CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSC-CSHHHHHHHHHHHHSSS------CCC
T ss_pred -------cccceecccccccccccccchhccccceEEecccccccccchhhhh-ccCCHHHHHHHHhCCCC------CCC
Confidence 014799999988888766543 358999999999997654432 12333333433333221 125
Q ss_pred eeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 149 VHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
...+|++.+++.++.. ...+|. ..++|.
T Consensus 254 ~~peevA~~v~fL~S~~a~~itGq~i~vDGG 284 (297)
T d1d7oa_ 254 LTADEVGNAAAFLVSPLASAITGATIYVDNG 284 (297)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence 6799999999999954 445775 456543
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.82 E-value=6.7e-05 Score=55.51 Aligned_cols=97 Identities=16% Similarity=0.067 Sum_probs=66.2
Q ss_pred CeEEEeecCCCCC--CCCCc---hhhhHHHHHHHHHHHHHHHHH----c-----------CCCEEEEecccceeccCCCC
Q 026820 1 MGVFHLASPNTLD--DPKDP---EKELLIPAVQGTLNVLEAAKK----F-----------GVRRVVLTSSISSIVPNPNW 60 (232)
Q Consensus 1 D~Vih~a~~~~~~--~~~~~---~~~~~~~nv~~~~~l~~~~~~----~-----------~~~~~i~~Ss~~~~~~~~~~ 60 (232)
|++||+||..... ....+ .+..+++|+.++..+++++.. . +-.++|++||.........
T Consensus 85 DiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~~- 163 (248)
T d1snya_ 85 NVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNT- 163 (248)
T ss_dssp SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCC-
T ss_pred ceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCCC-
Confidence 7899999986541 11122 346788999998888877532 1 2357999998743211110
Q ss_pred CCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCee
Q 026820 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSL 115 (232)
Q Consensus 61 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~ 115 (232)
.+. ...|+.||.....+.+.++.+ .|+.+..+.||.+-
T Consensus 164 ------------~~~-----~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~ 204 (248)
T d1snya_ 164 ------------DGG-----MYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK 204 (248)
T ss_dssp ------------SCC-----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred ------------CCC-----hHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCccc
Confidence 111 147999999999998887754 48999999999884
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.79 E-value=4.9e-05 Score=57.02 Aligned_cols=127 Identities=13% Similarity=-0.019 Sum_probs=80.9
Q ss_pred CeEEEeecCCCCCCC-CCc---hhhhHHHHHHHHHHHHHHHHH---cCCCEEEEecccceeccCCCCCCCCccCCCCCCC
Q 026820 1 MGVFHLASPNTLDDP-KDP---EKELLIPAVQGTLNVLEAAKK---FGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTD 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~-~~~---~~~~~~~nv~~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~ 73 (232)
|+++|+||....... ..+ ....+++|+.++..+.+++.. .+-.++|++||.++..+.+.
T Consensus 94 ~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~-------------- 159 (269)
T d1xu9a_ 94 DMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPM-------------- 159 (269)
T ss_dssp SEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTT--------------
T ss_pred cccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCC--------------
Confidence 678999888665221 222 246678898888888777642 12248999999755332221
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHHH-----cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCc
Q 026820 74 LDFCKSHKIWYSMSKTLAEKAAWEFAEK-----NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGA 148 (232)
Q Consensus 74 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (232)
...|+.||...+.+.+.++.+ .++.+..+.||.|-- . +..+...+. .....
T Consensus 160 -------~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T--------~---~~~~~~~~~------~~~~~ 215 (269)
T d1xu9a_ 160 -------VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDT--------E---TAMKAVSGI------VHMQA 215 (269)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCC--------H---HHHHHSCGG------GGGGC
T ss_pred -------chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCC--------c---HHHHhccCC------ccccC
Confidence 158999999999998888754 357888899988731 1 222222111 12234
Q ss_pred eeHHhHHHHHHHhhcCC
Q 026820 149 VHVKDVAKAQVLLFETS 165 (232)
Q Consensus 149 i~v~D~a~~~~~~~~~~ 165 (232)
...+++++.++..+...
T Consensus 216 ~~~e~~a~~i~~~~~~~ 232 (269)
T d1xu9a_ 216 APKEECALEIIKGGALR 232 (269)
T ss_dssp BCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHhhcC
Confidence 56788888888766443
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.76 E-value=0.00012 Score=53.61 Aligned_cols=128 Identities=19% Similarity=0.106 Sum_probs=85.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHc----------CCCEEEEecccceeccCCCCCCCCccCCCCCCCcccccccchhHHHHHH
Q 026820 20 KELLIPAVQGTLNVLEAAKKF----------GVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKT 89 (232)
Q Consensus 20 ~~~~~~nv~~~~~l~~~~~~~----------~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~ 89 (232)
+..++.|+.+...+++.+... +..++|++||..+..+.+.. ..|+.+|.
T Consensus 94 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~---------------------~~Y~asKa 152 (241)
T d1uaya_ 94 RRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ---------------------AAYAASKG 152 (241)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTC---------------------HHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCc---------------------hhhHHHHH
Confidence 567788888888887765432 22379999998654443221 58999999
Q ss_pred HHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHHHHhhcCCC
Q 026820 90 LAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQVLLFETSA 166 (232)
Q Consensus 90 ~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 166 (232)
..+.+.+.++.+ .|+++..+-||.+-.+.... ........+....+.. .-+...+|+|+++..++..+-
T Consensus 153 al~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~---~~~~~~~~~~~~~~~~-----~R~g~pedvA~~v~fL~s~~~ 224 (241)
T d1uaya_ 153 GVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG---LPEKAKASLAAQVPFP-----PRLGRPEEYAALVLHILENPM 224 (241)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT---SCHHHHHHHHTTCCSS-----CSCCCHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhhcCCceeeecCCcccccccch---hhhhHHHHHHhcCCCC-----CCCcCHHHHHHHHHHHHhCCC
Confidence 999999998865 48999999999985432111 1122233333332211 124569999999999998766
Q ss_pred CCce-EEEecC
Q 026820 167 ASGR-YLCTNG 176 (232)
Q Consensus 167 ~~~~-~~~~~~ 176 (232)
.+|. ..++|.
T Consensus 225 iTG~~i~VDGG 235 (241)
T d1uaya_ 225 LNGEVVRLDGA 235 (241)
T ss_dssp CCSCEEEESTT
T ss_pred CCCCEEEECCc
Confidence 7785 456553
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=97.65 E-value=0.0022 Score=47.33 Aligned_cols=85 Identities=18% Similarity=0.130 Sum_probs=58.1
Q ss_pred hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHH
Q 026820 82 IWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQ 158 (232)
Q Consensus 82 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 158 (232)
..|+.||...+.+.+.++.+ .|+++..+.||.+.-+... .......+....+. .+-+...+|+++++
T Consensus 170 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~-----~~~~~~~~~~~~pl-----~r~~~~peeva~~v 239 (266)
T d1mxha_ 170 CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM-----PQETQEEYRRKVPL-----GQSEASAAQIADAI 239 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS-----CHHHHHHHHTTCTT-----TSCCBCHHHHHHHH
T ss_pred hhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC-----CHHHHHHHHhcCCC-----CCCCCCHHHHHHHH
Confidence 58999999999999988764 4899999999988644322 22333444433321 12345799999999
Q ss_pred HHhhcCC--CCCce-EEEecC
Q 026820 159 VLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 159 ~~~~~~~--~~~~~-~~~~~~ 176 (232)
+.++... -.+|. +.++|.
T Consensus 240 ~fL~s~~s~~itG~~i~vDGG 260 (266)
T d1mxha_ 240 AFLVSKDAGYITGTTLKVDGG 260 (266)
T ss_dssp HHHHSGGGTTCCSCEEEESTT
T ss_pred HHHhCchhCCccCCeEEECcc
Confidence 9999653 35775 566653
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.46 E-value=0.00056 Score=50.39 Aligned_cols=141 Identities=16% Similarity=0.065 Sum_probs=81.6
Q ss_pred CeEEEeecCCCC-C-CCCC---chhhhHHHHHHHHHHHHHHHH----Hc-----------CCCEEEEecccceeccCCCC
Q 026820 1 MGVFHLASPNTL-D-DPKD---PEKELLIPAVQGTLNVLEAAK----KF-----------GVRRVVLTSSISSIVPNPNW 60 (232)
Q Consensus 1 D~Vih~a~~~~~-~-~~~~---~~~~~~~~nv~~~~~l~~~~~----~~-----------~~~~~i~~Ss~~~~~~~~~~ 60 (232)
|++||+||.... . .... ..+..+++|+.++..+.+++. +. ...+++.+|+.........
T Consensus 83 dilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~- 161 (250)
T d1yo6a1 83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT- 161 (250)
T ss_dssp CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC-
T ss_pred EEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCc-
Confidence 799999997543 1 1122 235688999999998887753 11 1135777776522111111
Q ss_pred CCCCccCCCCCCCcccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCC
Q 026820 61 PQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGS 137 (232)
Q Consensus 61 ~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~ 137 (232)
. .....+. ..|+.||.....+.+.++.+ .|+.+..+-||.|--+ + . +
T Consensus 162 ------~-~~~~~~~------~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~-----m------~-----~- 211 (250)
T d1yo6a1 162 ------S-GSAQFPV------LAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN-----L------G-----G- 211 (250)
T ss_dssp ------S-TTSSSCB------HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------------
T ss_pred ------c-cccchhH------HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCC-----C------C-----C-
Confidence 0 0111111 47999999999999988865 4899999999987311 0 0 0
Q ss_pred CCccCCcccCceeHHhHHHHHHHhhcCC--CCCceEEE-ecCccc
Q 026820 138 KDTQEHYWLGAVHVKDVAKAQVLLFETS--AASGRYLC-TNGIYQ 179 (232)
Q Consensus 138 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~~~-~~~~~s 179 (232)
....+..++.+..++..+... ...|+|+. .+.++.
T Consensus 212 -------~~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~p~~ 249 (250)
T d1yo6a1 212 -------KNAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE 249 (250)
T ss_dssp --------------HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred -------CCCCCCHHHHHHHHHHHHhcCCCCCCeEEECCCCeeCC
Confidence 001245678888888777543 34566533 344544
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.45 E-value=0.00016 Score=54.27 Aligned_cols=113 Identities=17% Similarity=-0.002 Sum_probs=68.5
Q ss_pred CeEEEeecCCCCCCCCC----chhhhHHHHHHHHHHHHHHHHHc--CCCEEEEecccceeccCCCCCCC-------CccC
Q 026820 1 MGVFHLASPNTLDDPKD----PEKELLIPAVQGTLNVLEAAKKF--GVRRVVLTSSISSIVPNPNWPQG-------KVID 67 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~----~~~~~~~~nv~~~~~l~~~~~~~--~~~~~i~~Ss~~~~~~~~~~~~~-------~~~~ 67 (232)
|++||.||......... ..+..+++|+.++..+.+++... .-.++|++||.+.+.+.....+. ....
T Consensus 83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~ 162 (275)
T d1wmaa1 83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT 162 (275)
T ss_dssp EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCC
T ss_pred EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccc
Confidence 79999999876522222 22357889999999999998653 12389999997554332110000 0000
Q ss_pred C---------------CCCCCcccccccchhHHHHHHHHHHHHHHHHHH-------cCCcEEEEcCCCee
Q 026820 68 E---------------TSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEK-------NGTDVVAIHPATSL 115 (232)
Q Consensus 68 E---------------~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~ilR~~~i~ 115 (232)
+ ...... ...+...|+.||.....+.+.++.+ .++.+..+-||.|-
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~ 230 (275)
T d1wmaa1 163 EEELVGLMNKFVEDTKKGVHQK--EGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR 230 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTT--TTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred hhhhccccccchhccccccccc--CCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeccccc
Confidence 0 000000 0111247999999988877665433 38999999999884
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=97.16 E-value=0.0058 Score=45.21 Aligned_cols=88 Identities=16% Similarity=0.110 Sum_probs=56.4
Q ss_pred hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCcccCceeHHhHHHHH
Q 026820 82 IWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWLGAVHVKDVAKAQ 158 (232)
Q Consensus 82 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 158 (232)
..|+.+|...+.+.+..+.+ .|+++.++.||.+.-+..... ..............+ ..-+...+|+|.++
T Consensus 155 ~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~-~~~~~~~~~~~~~~p------~~r~~~pedIA~~v 227 (274)
T d2pd4a1 155 NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI-ADFRMILKWNEINAP------LRKNVSLEEVGNAG 227 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS-TTHHHHHHHHHHHST------TSSCCCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcccccc-CchHHHHHHHhhhhh------ccCCcCHHHHHHHH
Confidence 48999999999998887765 489999999998865432211 111112121111111 12467799999999
Q ss_pred HHhhcCC--CCCce-EEEecC
Q 026820 159 VLLFETS--AASGR-YLCTNG 176 (232)
Q Consensus 159 ~~~~~~~--~~~~~-~~~~~~ 176 (232)
.+++... ..+|. +.++|.
T Consensus 228 ~fL~S~~s~~itG~~i~vDGG 248 (274)
T d2pd4a1 228 MYLLSSLSSGVSGEVHFVDAG 248 (274)
T ss_dssp HHHHSGGGTTCCSCEEEESTT
T ss_pred HHHhChhhCCCcCceEEECCC
Confidence 9998653 35674 556553
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=97.13 E-value=0.0022 Score=47.42 Aligned_cols=89 Identities=13% Similarity=0.082 Sum_probs=54.3
Q ss_pred hhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCC-----CCCCChh----HHHHHHHHhCCCCccCCcccCce
Q 026820 82 IWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFP-----QPYVNAS----GAVLQRLLQGSKDTQEHYWLGAV 149 (232)
Q Consensus 82 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~-----~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i 149 (232)
..|+.+|...+.+.+.++.+ .|+++..+.||.+-.+.. ....... ..+........| ..+.+.
T Consensus 158 ~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----l~rr~~ 232 (268)
T d2h7ma1 158 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAP-----IGWNMK 232 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCT-----TCCCTT
T ss_pred chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCC-----CCCCCC
Confidence 58999999999999988765 389999999998843210 0000000 111111111111 123467
Q ss_pred eHHhHHHHHHHhhcC--CCCCce-EEEec
Q 026820 150 HVKDVAKAQVLLFET--SAASGR-YLCTN 175 (232)
Q Consensus 150 ~v~D~a~~~~~~~~~--~~~~~~-~~~~~ 175 (232)
..+|+++++.+++.. ...+|. ..++|
T Consensus 233 ~p~dva~~v~fL~Sd~a~~iTG~~i~vDG 261 (268)
T d2h7ma1 233 DATPVAKTVCALLSDWLPATTGDIIYADG 261 (268)
T ss_dssp CCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred CHHHHHHHHHHHhCchhcCccCCEEEECc
Confidence 799999999999854 335664 46654
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=96.57 E-value=0.039 Score=39.97 Aligned_cols=167 Identities=15% Similarity=0.054 Sum_probs=83.2
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHH----HcCCCEEEEecccceeccCCCCCCCCccCCCCC-CC--
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAK----KFGVRRVVLTSSISSIVPNPNWPQGKVIDETSW-TD-- 73 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~~~~~E~~~-~~-- 73 (232)
|+++|+||.... ..........|..+...+.+... +........+++....+......+......... ..
T Consensus 64 d~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~ 140 (257)
T d1fjha_ 64 DGLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKAR 140 (257)
T ss_dssp SEEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHH
T ss_pred cEEEEcCCCCCc---HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEe
Confidence 788999987654 44456677778777777665543 333345555555422111100000000000000 00
Q ss_pred ----cccccccchhHHHHHHHHHHHHHHHHHH---cCCcEEEEcCCCeeCCCCCCCCChhHHHHHHHHhCCCCccCCccc
Q 026820 74 ----LDFCKSHKIWYSMSKTLAEKAAWEFAEK---NGTDVVAIHPATSLGPFPQPYVNASGAVLQRLLQGSKDTQEHYWL 146 (232)
Q Consensus 74 ----~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (232)
..........|+.+|...+.+.+.++.+ .|+++..+.||.+-.+...... .-......+.+... | ..
T Consensus 141 s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-~~~~~~~~~~~~~~---P--lg 214 (257)
T d1fjha_ 141 AIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL-QDPRYGESIAKFVP---P--MG 214 (257)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCC---S--TT
T ss_pred eehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhc-CCHHHHHHHHhcCC---C--CC
Confidence 0000011236999999999999988754 4899999999998544321110 00111111111110 1 11
Q ss_pred CceeHHhHHHHHHHhhcC--CCCCce-EEEecC
Q 026820 147 GAVHVKDVAKAQVLLFET--SAASGR-YLCTNG 176 (232)
Q Consensus 147 ~~i~v~D~a~~~~~~~~~--~~~~~~-~~~~~~ 176 (232)
-+...+|+++++.+++.. ...+|. ..++|.
T Consensus 215 R~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence 256789999999999854 345675 455553
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=85.69 E-value=1.2 Score=28.91 Aligned_cols=47 Identities=13% Similarity=0.022 Sum_probs=35.8
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCE-EEEec
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRR-VVLTS 49 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~-~i~~S 49 (232)
|+|+.+||.... ..++..++...|+...+.+++.+.+.+.+- ++.+|
T Consensus 70 DivVitag~~~~--~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt 117 (144)
T d1mlda1 70 DVVVIPAGVPRK--PGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (144)
T ss_dssp SEEEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred CEEEECCCcCCC--CCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 789999997433 334568899999999999999999986554 44433
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=81.70 E-value=2.5 Score=27.35 Aligned_cols=46 Identities=4% Similarity=-0.112 Sum_probs=35.0
Q ss_pred CeEEEeecCCCCCCCCCchhhhHHHHHHHHHHHHHHHHHcCCCEEEEe
Q 026820 1 MGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLT 48 (232)
Q Consensus 1 D~Vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~~i~~ 48 (232)
|+||-+||.... ...+..+++..|....+.+++...+.+.+.++.+
T Consensus 76 DvVVitAG~~~~--~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV 121 (145)
T d1hyea1 76 DVVIITSGVPRK--EGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI 121 (145)
T ss_dssp SEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred eEEEEecccccC--CCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence 789999987543 3345678899999999999999988865554433
|