BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026824
(232 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q688X9|DI191_ORYSJ Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica
GN=DI19-1 PE=2 SV=1
Length = 226
Score = 262 bits (669), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 167/233 (71%), Gaps = 8/233 (3%)
Query: 1 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDIAS 60
MDS+ W SRLAAAKR Y Q H DR +++ +++++VRP+F CPYCYED D+ S
Sbjct: 1 MDSEHWISRLAAAKRFYAAQLGH-----ADRAGMEEVDMDEEVRPEFACPYCYEDHDVVS 55
Query: 61 LCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRRRRLRRVAIPSSQAL 120
LC+HLE+EH E CPICS K+A+DML+HIT+QHG+LFK RRRLRR IP SQAL
Sbjct: 56 LCAHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHGYLFK--NRRRLRRFVIPGSQAL 113
Query: 121 SLLGRDLREAHLQVLLGGSGYRSSN-ANISNAATDPFLSSLILNFPSSEAEEISKSVVTS 179
SLL RDLREAHLQVLLGG G+RS+N +N +N + DP LSS L+FP+S+ EE SK ++
Sbjct: 114 SLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISI 173
Query: 180 TEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 232
+D S P W +S D SL+ EERE++ +Q + RA+FVQDLLL+TL D
Sbjct: 174 PDDASVIKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD 226
>sp|Q6H6E6|DI194_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa subsp.
japonica GN=DI19-4 PE=2 SV=1
Length = 245
Score = 213 bits (543), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 137/246 (55%), Positives = 169/246 (68%), Gaps = 15/246 (6%)
Query: 1 MDSDFWTSRLAAAKRQYTLQQHHHQSSQ-------------IDRLSIDDFEVEDDVRPDF 47
MDSD W SRL AAKRQY LQ+ + +DR DD E ED+VRPDF
Sbjct: 1 MDSDHWISRLMAAKRQYALQRAQNHHHATATATATAASHSHLDRYGYDDVEPEDEVRPDF 60
Query: 48 PCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRRR 107
PCPYCYED DI SLC+HLEDEH ESKV CP+CS ++++D+L HITLQH +LF+LQR
Sbjct: 61 PCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQHSYLFRLQRHH 120
Query: 108 RLRRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSS 167
RLRRVA+PS+ ALSL GRDL+E +L+VLLG S RSS N +++ TD LSSL+LN SS
Sbjct: 121 RLRRVAVPSNHALSLGGRDLQETYLKVLLGNSS-RSSGTNAASSVTDSLLSSLVLNLSSS 179
Query: 168 EAEEISK-SVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLL 226
EAE+ +K S + E+ K P+ WK S D +LS EERE+R R+ A R+SFVQ LL+
Sbjct: 180 EAEDTAKFSALAVVENNWFKRTLPSKTWKASSDSNLSQEERERRRRRAAVRSSFVQHLLV 239
Query: 227 STLLID 232
STL D
Sbjct: 240 STLFDD 245
>sp|Q5QMP3|DI193_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp.
japonica GN=DI19-3 PE=2 SV=1
Length = 246
Score = 207 bits (528), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/248 (48%), Positives = 149/248 (60%), Gaps = 18/248 (7%)
Query: 1 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDD---------------VRP 45
MDS+ W S LAAAKR Y Q H + + E+EDD P
Sbjct: 1 MDSEHWISSLAAAKRFYAAQLGHVDDMAGIGMEEVEMEMEDDGEGMELELEMQLEEATWP 60
Query: 46 DFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQR 105
D CPYCYED DIASLC+HLE++H E + CPIC K+ RDML+HIT+QHG+LFK
Sbjct: 61 DVACPYCYEDHDIASLCAHLEEDHPYEPHTSPCPICFEKITRDMLNHITMQHGYLFK--S 118
Query: 106 RRRLRRVAIPSSQALSLLGRDLREAHLQVLLGGSG-YRSSNANISNAATDPFLSSLILNF 164
RR+RR IP SQALSLL RDLR+A LQ LLGG R SN +N + DP LSS L F
Sbjct: 119 GRRMRRFDIPESQALSLLSRDLRDAQLQALLGGGHRQRRSNTTATNISADPLLSSFGLGF 178
Query: 165 PSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDL 224
+ ++EE SK+ V +DTS P W++ D SL+ EERE++ +Q RA+FVQ L
Sbjct: 179 STLDSEERSKAPVPIPDDTSIHKDTPAQPWESRIDSSLTSEEREQKRKQATDRATFVQGL 238
Query: 225 LLSTLLID 232
+LSTL D
Sbjct: 239 VLSTLFED 246
>sp|Q84J70|DI193_ARATH Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana
GN=DI19-3 PE=1 SV=1
Length = 223
Score = 148 bits (373), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 139/232 (59%), Gaps = 11/232 (4%)
Query: 1 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDIAS 60
MDSD W+ RLA+A R+Y L S L ++ + E++ R +F CP+C + FDI S
Sbjct: 1 MDSDSWSDRLASATRRYQLA---FPSRSDTFLGFEEIDGEEEFREEFACPFCSDYFDIVS 57
Query: 61 LCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRRRRLRRVAIPSSQAL 120
LC H++++H E+K VCP+C+V+V DM++HITLQH ++FK+ R+R+ RR S L
Sbjct: 58 LCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGG--SYSTL 115
Query: 121 SLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEISKSVVTST 180
S+L R+ + + Q L GGS S+++ SN A DP LSS I P ++ ++S +++
Sbjct: 116 SILRREFPDGNFQSLFGGSSCIVSSSSSSNVAADPLLSSFIS--PIADGFFTTESCISAE 173
Query: 181 EDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 232
K+ + + SLS E+ +++++ R+ FV++LL ST+L D
Sbjct: 174 TGPVKKTTIQCLPEQNAKKTSLSAEDHKQKLK----RSEFVRELLSSTILDD 221
>sp|Q5W794|DI192_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp.
japonica GN=DI19-2 PE=2 SV=2
Length = 233
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 117/186 (62%), Gaps = 9/186 (4%)
Query: 47 FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRR 106
+ CP+C EDFD + C H++DEH+ E+K VCPIC+ +V D++ H+T+QHG FK+QRR
Sbjct: 54 YNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGSYFKMQRR 113
Query: 107 RRLRRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPS 166
RR+R+++ S LSLL +DLR+ LQ LGGS Y S N AA DPFLSSLI + P
Sbjct: 114 RRVRKISSGSHSLLSLLRKDLRDGSLQSFLGGSSYVS---NPPAAAPDPFLSSLICSLPV 170
Query: 167 SEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLL 226
+E + S S+++ + P +PSLS +++++R A R+ FV+ L+L
Sbjct: 171 AEPSKDLHS--DSSDNNFLLNKFPDDKTAERAEPSLSEKDQKER----AQRSKFVRGLVL 224
Query: 227 STLLID 232
ST+ D
Sbjct: 225 STIFED 230
>sp|Q6NM26|DI196_ARATH Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana
GN=DI19-6 PE=1 SV=1
Length = 222
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 140/232 (60%), Gaps = 12/232 (5%)
Query: 1 MDSDFWTSRLAAAKRQYTLQQHHHQSSQIDRLSIDDFEVEDDVRPDFPCPYCYEDFDIAS 60
MDSD W+ RLA+A R+Y L S + L ++ E EDD R ++ CP+C + FDI S
Sbjct: 1 MDSDSWSDRLASASRRYQLD---FLSRSDNFLGFEEIEGEDDFREEYACPFCSDYFDIVS 57
Query: 61 LCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRRRRLRRVAIPSSQAL 120
LC H++++H ++K VCPIC+VKV+ DM++HITLQH ++FK+ R+R+ RR S L
Sbjct: 58 LCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRKRKSRRGGAQS--ML 115
Query: 121 SLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPSSEAEEISKSVVTST 180
S+L R+ + + Q L G+ R+ +++ ++ A DP LSS I P ++ IS+S + +
Sbjct: 116 SILKREFPDGNFQSLFEGT-SRAVSSSSASIAADPLLSSFIS--PMADDFFISESSLCAD 172
Query: 181 EDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTLLID 232
++ K+ + + SLS E+ ++++Q + FVQ +L S +L D
Sbjct: 173 TSSAKKTLNQSLPERNVEKQSLSAEDHREKLKQ----SEFVQGILSSMILED 220
>sp|Q9FJ17|DI197_ARATH Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana
GN=DI19-7 PE=1 SV=2
Length = 211
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 119/202 (58%), Gaps = 21/202 (10%)
Query: 32 LSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLS 91
L + D E EDD++ +F CP+C ++FDI LC H++ H E+K VCP+C+ KV D++
Sbjct: 28 LYLGDVEGEDDLKAEFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIVG 87
Query: 92 HITLQHGHLFKLQRRRRLRRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNA 151
HIT QHG++FK+QRRRRLR+ SS L+ L ++LREA+LQ L G S + S SN
Sbjct: 88 HITTQHGNVFKVQRRRRLRKGGY-SSTYLT-LKKELREANLQSLGGSSTFIPS----SNI 141
Query: 152 ATDPFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSF-DPSLSHEEREKR 210
+DP LSS + PS+ + TE S +P K+ S S+E++EK
Sbjct: 142 DSDPLLSSFMFKPPSA---------IPITEGDSVAQVSPKDTSKSKIQQESFSNEDQEK- 191
Query: 211 IRQGAGRASFVQDLLLSTLLID 232
A ++ FV+ LL ST+L D
Sbjct: 192 ----AKKSKFVRGLLWSTMLED 209
>sp|Q39083|DI191_ARATH Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana GN=DI19-1
PE=1 SV=2
Length = 206
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 121/202 (59%), Gaps = 21/202 (10%)
Query: 32 LSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLS 91
+ ++ + +DD + +F CP+C E +DI LC H++DEH+ ESK VCP+CS+KV D+++
Sbjct: 20 MGFEEIDGDDDFQEEFACPFCAESYDIIGLCCHIDDEHTLESKNAVCPVCSLKVGVDIVA 79
Query: 92 HITLQHGHLFKLQRRRRLRRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNA 151
HITL HG LFKLQR+R+ R+ S+ LSLL ++LRE LQ LL G+ S N +++++
Sbjct: 80 HITLHHGSLFKLQRKRKSRKSGTNST--LSLLRKELREGDLQRLL---GFTSRNGSVASS 134
Query: 152 AT-DPFLSSLI--LNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEERE 208
T DP LSS I SS A +K+V +ED + + F +S ++RE
Sbjct: 135 VTPDPLLSSFISPTRSQSSPAPRQTKNV---SEDKQIERK------RQVFISPVSLKDRE 185
Query: 209 KRIRQGAGRASFVQDLLLSTLL 230
+R ++ FVQ LL S +
Sbjct: 186 ER----RHKSEFVQRLLSSAIF 203
>sp|Q8VXU6|DI194_ARATH Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana
GN=DI19-4 PE=1 SV=1
Length = 224
Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 122/198 (61%), Gaps = 10/198 (5%)
Query: 35 DDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHIT 94
+D E EDD++ +F CP+C EDFDI LC H+++EH E+K VCP+C+ +V D++ HIT
Sbjct: 35 EDLEGEDDLKAEFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVCPVCTKRVGLDIVGHIT 94
Query: 95 LQHGHLFKLQRRRRLRRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATD 154
QH + FK+QRRRRLRR SS L+ L ++LREA+LQ LLGGS +S+ NI +D
Sbjct: 95 TQHANFFKVQRRRRLRRGGY-SSTYLA-LKKELREANLQSLLGGSSSFTSSTNID---SD 149
Query: 155 PFLSSLILNFPSSEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQG 214
P LSS + N PS + + + + K + + + + LS E++EK
Sbjct: 150 PLLSSFMFNSPSVNQSANKSATPVTVGNAATKVSIKESLKRDIQEAPLSGEDQEK----- 204
Query: 215 AGRASFVQDLLLSTLLID 232
A ++ FV+ LLLST+L D
Sbjct: 205 AKKSEFVRGLLLSTMLED 222
>sp|Q5JME8|DI195_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Oryza sativa subsp.
japonica GN=DI19-5 PE=2 SV=1
Length = 202
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 47 FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRR 106
FPCP+CY + ++ +C+HL++EH +++ VCP+C+ + RDM +H +QH HL K R
Sbjct: 37 FPCPFCYIEVEVPFICNHLQEEHCFDTRNAVCPLCADNIGRDMGAHFRVQHSHLLK---R 93
Query: 107 RRLRRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPS 166
R+ R PSS + + + + + G Y +N + A DP LS I
Sbjct: 94 RKPSR---PSSSWPT--PSNNSDPYFE---GPPQYMMNNRTYQDPAPDPLLSQFIC---- 141
Query: 167 SEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLL 226
S A+ + S T+TE +A +H + S +L+ + + +++ R FV+++++
Sbjct: 142 SMAQTDTNSDNTNTE---IAVSAVSHDQRLSQRVTLTDDASKLELKERLQRIEFVKEIIM 198
Query: 227 STLL 230
ST+L
Sbjct: 199 STIL 202
>sp|O04259|DI195_ARATH Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabidopsis thaliana
GN=DI19-5 PE=1 SV=2
Length = 214
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 26/199 (13%)
Query: 36 DFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITL 95
+FE +D++ D+PCP+C +D+D+ LC H+++EH ++ +CP+CS +V M+ HIT
Sbjct: 32 EFEDDDEMAVDYPCPFCSDDYDLVELCHHIDEEHQLDANNGICPVCSRRVKMHMVDHITT 91
Query: 96 QHGHLFKLQRRRRLRRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDP 155
QH +FK RL + ++ S R+ +LQ L+ S + S + DP
Sbjct: 92 QHRDVFK-----RLYK-----DESYSAFSPGTRK-YLQSLIDEP---LSTNHTSKSVLDP 137
Query: 156 FLSSLILNFPSSEAEEISK---SVVTSTEDTSAKSAAPTHMWKTSFDPS-LSHEEREKRI 211
L S I N PS + ++ + S S ED S + W++ PS LS E +
Sbjct: 138 LL-SFIYNPPSPKKSKLVQPDSSSEASMEDNSLIRDSTEKDWES---PSPLSDTE----L 189
Query: 212 RQGAGRASFVQDLLLSTLL 230
+ A + FVQ L+ S +
Sbjct: 190 LEKAKKREFVQGLISSAIF 208
>sp|Q8GWK1|DI192_ARATH Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabidopsis thaliana
GN=DI19-2 PE=1 SV=1
Length = 221
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 38 EVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQH 97
EV+DD+ ++PCP+C D+D+ LC H+++EH E+ +CP+CS +V M+ HIT H
Sbjct: 38 EVDDDIAVEYPCPFCASDYDLVELCHHIDEEHRHEANNGICPVCSKRVKMHMVDHITSHH 97
Query: 98 GHLFKLQRRRRLRR 111
+ K +++ R
Sbjct: 98 RDVLKSEQKEMSYR 111
>sp|Q7XBA5|DI196_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Oryza sativa subsp.
japonica GN=DI19-6 PE=2 SV=1
Length = 208
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 47 FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITLQHGHLFKLQRR 106
PCP+CY + ++ LC HL++EH + K VCPIC+ + +D H +QH HL K R
Sbjct: 37 IPCPFCYIEVEVHFLCDHLQEEHCFDMKNAVCPICADNLDKDTDEHFRVQHSHLLK---R 93
Query: 107 RRLRRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSNANISNAATDPFLSSLILNFPS 166
R+ + S A + G +++ + G + +++ DP LS I +
Sbjct: 94 RKSSSFSCKPSSAAADKGSYEEDSYFEAPSHCMGRPA-----PDSSPDPLLSQFICCSLA 148
Query: 167 SEAEEISKSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLL 226
+ +S + S+ S + D S EE E+R++ R FV+ +L+
Sbjct: 149 PPVDSPRRSEADAEGHGSSSSDDQKRREQGVMD-DASKEELEERLQ----RIEFVKQMLM 203
Query: 227 STL 229
+T+
Sbjct: 204 TTI 206
>sp|Q4U5R4|RN114_BOVIN RING finger protein 114 OS=Bos taurus GN=RNF114 PE=2 SV=1
Length = 230
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
R FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 140 RYTFPCPYCPEKNFDQEGLVEHCKLSHSTDTKSVVCPICA 179
>sp|Q6J2U6|RN114_RAT RING finger protein 114 OS=Rattus norvegicus GN=Rnf114 PE=2 SV=1
Length = 229
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
R FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 139 RYTFPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICA 178
>sp|Q9ET26|RN114_MOUSE RING finger protein 114 OS=Mus musculus GN=Rnf114 PE=2 SV=2
Length = 229
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
R FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 139 RYTFPCPYCPEKNFDQEGLVEHCKLTHSTDTKSVVCPICA 178
>sp|Q6J1I8|RN114_PIG RING finger protein 114 OS=Sus scrofa GN=RNF114 PE=2 SV=1
Length = 228
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
R FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 138 RYTFPCPYCPEKNFDQEGLVEHCKLVHSTDTKSVVCPICA 177
>sp|Q9P0J7|KCMF1_HUMAN E3 ubiquitin-protein ligase KCMF1 OS=Homo sapiens GN=KCMF1 PE=1
SV=2
Length = 381
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV-------KVARDMLSHITLQH 97
F CPYC + + SL H+ EH+ S +CPIC+ V D +H+TL+H
Sbjct: 78 FTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
Score = 32.0 bits (71), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 199 DPSLSHEEREKRIRQGAGRASFVQDLLLSTLL 230
DP +S ER+ + A R+ FVQ+LLLSTL+
Sbjct: 298 DPKMSETERQSMESERADRSLFVQELLLSTLV 329
>sp|Q6GPB6|KCMF1_XENLA E3 ubiquitin-protein ligase KCMF1 OS=Xenopus laevis GN=kcmf1 PE=2
SV=1
Length = 381
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV-------KVARDMLSHITLQH 97
F CPYC + + SL H+ EH+ S +CPIC+ V D +H+TL+H
Sbjct: 78 FTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
Score = 31.2 bits (69), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 173 SKSVVTSTEDTSAKSAAPTHMWKTSF-----------DPSLSHEEREKRIRQGAGRASFV 221
S T T+ T+A + + T + S DP ++ ER+ + A R+ FV
Sbjct: 261 SNVTTTITQSTAATNTSSTENNQQSIQNSQFLLTRLNDPKMTEAERQSIESERADRSLFV 320
Query: 222 QDLLLSTLL 230
Q+LLLSTL+
Sbjct: 321 QELLLSTLM 329
>sp|Q1LZE1|KCMF1_BOVIN E3 ubiquitin-protein ligase KCMF1 OS=Bos taurus GN=KCMF1 PE=2 SV=1
Length = 381
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV-------KVARDMLSHITLQH 97
F CPYC + + SL H+ EH+ S +CPIC+ V D +H+TL+H
Sbjct: 78 FTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 199 DPSLSHEEREKRIRQGAGRASFVQDLLLSTLL 230
DP +S ER+ + A R+ FVQ+LLLSTL+
Sbjct: 298 DPKMSETERQSMESERADRSLFVQELLLSTLV 329
>sp|Q9Y508|RN114_HUMAN RING finger protein 114 OS=Homo sapiens GN=RNF114 PE=1 SV=1
Length = 228
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
R FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 138 RYTFPCPYCPEKNFDQEGLVEHCKLFHSTDTKSVVCPICA 177
>sp|Q6J212|RN114_PANTR RING finger protein 114 OS=Pan troglodytes GN=RNF114 PE=2 SV=1
Length = 228
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 44 RPDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS 82
R FPCPYC E +FD L H + HS ++K VCPIC+
Sbjct: 138 RYTFPCPYCPEKNFDQEGLVEHCKLFHSTDTKSVVCPICA 177
>sp|Q80UY2|KCMF1_MOUSE E3 ubiquitin-protein ligase KCMF1 OS=Mus musculus GN=Kcmf1 PE=2
SV=1
Length = 381
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV-------KVARDMLSHITLQH 97
F CPYC + + SL H+ EH+ S +CPIC+ V D +H+TL+H
Sbjct: 78 FTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 199 DPSLSHEEREKRIRQGAGRASFVQDLLLSTLL 230
DP +S ER+ + A R+ FVQ+LLLSTL+
Sbjct: 298 DPKMSEAERQSMESERADRSLFVQELLLSTLV 329
>sp|Q7T321|KCMF1_DANRE E3 ubiquitin-protein ligase KCMF1 OS=Danio rerio GN=kcmf1 PE=2 SV=1
Length = 383
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 47 FPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICSV-------KVARDMLSHITLQH 97
F CPYC + + SL H+ EH+ S +CPIC+ V D +H+TL+H
Sbjct: 78 FTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEH 136
>sp|Q8K083|ZN536_MOUSE Zinc finger protein 536 OS=Mus musculus GN=Znf536 PE=2 SV=1
Length = 1302
Score = 34.7 bits (78), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 38 EVEDDVRPD--FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITL 95
++EDD R + +PCP C + F S+ S H+ E K CP C + A+ I L
Sbjct: 119 DIEDDARKNRKYPCPLCGKRFRFNSILSLHMRTHTGE-KPFKCPYCDHRAAQKGNLKIHL 177
Query: 96 QHGHLFKLQR-RRRLR 110
+ L L + R R+R
Sbjct: 178 RTHKLGNLGKGRGRVR 193
>sp|O15090|ZN536_HUMAN Zinc finger protein 536 OS=Homo sapiens GN=ZNF536 PE=1 SV=3
Length = 1300
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 38 EVEDDVRPD--FPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLSHITL 95
++EDD R + +PCP C + F S+ S H+ E K CP C + A+ I L
Sbjct: 119 DIEDDARKNRKYPCPLCGKRFRFNSILSLHMRTHTGE-KPFKCPYCDHRAAQKGNLKIHL 177
Query: 96 QHGHLFKLQR-RRRLR 110
+ L L + R R+R
Sbjct: 178 RTHKLGNLGKGRGRVR 193
>sp|P09437|CYB2_HANAN Cytochrome b2, mitochondrial OS=Hansenula anomala GN=CYB2 PE=1 SV=2
Length = 573
Score = 33.9 bits (76), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 174 KSVVTSTEDTSAKSAAPTHMWKTSFDPSLSHEEREKRIRQGAGRASFVQDLLLSTL 229
K V STE K++AP ++ T+ L H E E I +GAGR VQ ++STL
Sbjct: 240 KDVDISTEFFGEKTSAPFYISATAL-AKLGHPEGEVAIAKGAGREDVVQ--MISTL 292
>sp|O60315|ZEB2_HUMAN Zinc finger E-box-binding homeobox 2 OS=Homo sapiens GN=ZEB2 PE=1
SV=1
Length = 1214
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 40 EDDVRPDFP--------CPYCYEDFD-IASLCSHLEDEHSCESKVTVCPICSVKVA---- 86
E+D+ P P CPYC + + SL H++ H + CP+CS A
Sbjct: 196 ENDLPPGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEENFSCPLCSYTFAYRTQ 255
Query: 87 --RDMLSHI--TLQHGHLFKLQRRRRLR 110
R M++H T QH L + R+ +
Sbjct: 256 LERHMVTHKPGTDQHQMLTQGAGNRKFK 283
>sp|Q9R0G7|ZEB2_MOUSE Zinc finger E-box-binding homeobox 2 OS=Mus musculus GN=Zeb2 PE=1
SV=2
Length = 1215
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 40 EDDVRPDFP--------CPYCYEDFD-IASLCSHLEDEHSCESKVTVCPICSVKVA---- 86
E+D+ P P CPYC + + SL H++ H + CP+CS A
Sbjct: 196 ENDLPPGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEENFSCPLCSYTFAYRTQ 255
Query: 87 --RDMLSHI--TLQHGHLFKLQRRRRLR 110
R M++H T QH L + R+ +
Sbjct: 256 LERHMVTHKPGTDQHQMLTQGAGNRKFK 283
>sp|Q1L721|RN138_XENLA E3 ubiquitin-protein ligase RNF138 OS=Xenopus laevis GN=rnf138 PE=1
SV=1
Length = 222
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 45 PDFPCPYCYE-DFDIASLCSHLEDEHSCESKVTVCPICS-------VKVARDMLSHITLQ 96
P + CP C E + + SL H + H E VCPIC+ ++ ++++H+ +
Sbjct: 132 PKYKCPLCSEHNLNQRSLLEHCNNVHYYEEVEMVCPICATLPWGDPIQTTGNVIAHLNAR 191
Query: 97 H 97
H
Sbjct: 192 H 192
>sp|Q09452|YQ23_CAEEL Putative zinc finger protein C09F5.3 OS=Caenorhabditis elegans
GN=C09F5.3 PE=4 SV=2
Length = 359
Score = 31.6 bits (70), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 49 CPYCYEDF-DIASLCSHLEDE-HSCESKVTVCPICSVKVA----RDMLSHITLQHGHLFK 102
C C + F D A H++ S S++ CPIC V + L H+T QH +
Sbjct: 121 CQQCEDTFEDFAQFAIHMKSHLSSVTSQLFFCPICPVGTPFRDKKSQLEHLTTQHLQIQV 180
Query: 103 LQRRRRLRRVAIPSSQALSLLGRDLREAHLQVLLGGSGYRSSN 145
Q + A PS QA S+ EAH + + + N
Sbjct: 181 TQHICSICDSAFPSPQAQSV---HFAEAHKKYSCTNCDFETEN 220
>sp|Q9H1K0|RBNS5_HUMAN Rabenosyn-5 OS=Homo sapiens GN=ZFYVE20 PE=1 SV=2
Length = 784
Score = 30.8 bits (68), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 33 SIDDFEVEDDVRPDFPCPYCYEDFD-IASLCSHLEDEHSCESKVTVCPICSV----KVAR 87
S+DD +VR F CP C +D L SH E+EHS E + I S+ K A+
Sbjct: 3 SLDD---PGEVREGFLCPLCLKDLQSFYQLHSHYEEEHSGEDRDVKGQIKSLVQKAKKAK 59
Query: 88 DML 90
D L
Sbjct: 60 DRL 62
>sp|O16999|ZPR1_CAEEL Zinc finger protein ZPR1 homolog OS=Caenorhabditis elegans
GN=W03F9.1 PE=3 SV=2
Length = 455
Score = 30.8 bits (68), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 32 LSIDDFEVEDDVRPDFPCPYCYEDFDIASLCSHLEDEHSCESKVTVCPICSVKVARDMLS 91
LS DD+E V D CP C ED + +C+ + + CP C K
Sbjct: 12 LSADDYEAAPIVV-DSVCPVCEEDGETRIMCTSIPYYRAVILMSFECPHCGHKNNEIQSG 70
Query: 92 HITLQHGHL--FKLQRRRRLRRVAIPSSQA 119
+HG L ++Q+ LRR + S A
Sbjct: 71 EAVQEHGTLIVLRVQKPEDLRRQLVKSEYA 100
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.130 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,403,335
Number of Sequences: 539616
Number of extensions: 2960061
Number of successful extensions: 9212
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 9126
Number of HSP's gapped (non-prelim): 94
length of query: 232
length of database: 191,569,459
effective HSP length: 114
effective length of query: 118
effective length of database: 130,053,235
effective search space: 15346281730
effective search space used: 15346281730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)