BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>026825
MATIVSSSSFFSVSLPGRLGNSRRCSVKPNPSPIFIRKFVAKIRASSTAFVETKPSEPSF
VENEASTSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAA
SGSKDYGELMSPATEFFRMPFMSFIYERGWRQNFVWGGFPGPEKEFELMKGYLKPVLGGN
IIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKEYE

High Scoring Gene Products

Symbol, full name Information P value
AT1G78140 protein from Arabidopsis thaliana 4.0e-58
AT2G41040 protein from Arabidopsis thaliana 3.7e-39

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  026825
        (232 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2194759 - symbol:AT1G78140 species:3702 "Arabi...   597  4.0e-58   1
TAIR|locus:2063218 - symbol:AT2G41040 species:3702 "Arabi...   418  3.7e-39   1


>TAIR|locus:2194759 [details] [associations]
            symbol:AT1G78140 species:3702 "Arabidopsis thaliana"
            [GO:0008152 "metabolic process" evidence=IEA] [GO:0008168
            "methyltransferase activity" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0010287 "plastoglobule"
            evidence=IDA] InterPro:IPR013216 Pfam:PF08241 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008168 GO:GO:0010287 EMBL:AC012680
            eggNOG:COG2226 EMBL:BT004985 EMBL:BT004126 EMBL:AY086976
            IPI:IPI00547634 PIR:F96810 RefSeq:NP_565170.1 UniGene:At.18013
            UniGene:At.71185 ProteinModelPortal:Q8LBV4 SMR:Q8LBV4 IntAct:Q8LBV4
            PaxDb:Q8LBV4 PRIDE:Q8LBV4 EnsemblPlants:AT1G78140.1 GeneID:844150
            KEGG:ath:AT1G78140 TAIR:At1g78140 HOGENOM:HOG000006413
            InParanoid:Q8LBV4 OMA:WRQNFIW PhylomeDB:Q8LBV4
            ProtClustDB:CLSN2917480 Genevestigator:Q8LBV4 Uniprot:Q8LBV4
        Length = 355

 Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
 Identities = 116/199 (58%), Positives = 139/199 (69%)

Query:    39 FVAK-IRASSTAF-VETKP-SEPSFV---ENEASTSKNVLACPICYKPLTWIGD-XXXXX 91
             FV++   ASS +  VET   S   FV   +++    K +LACPICY  L WI        
Sbjct:    37 FVSRSAHASSASVSVETNSNSNVDFVIEKKDKNRGEKKILACPICYNSLAWISQPNGLIE 96

Query:    92 XXXXXXXXQCNTCKKTYSGVGTHFDMTAASGSKDYGELMSPATEFFRMPFMSFIYERGWR 151
                     QCNTCK++YSG  TH D+  ASGSK Y E M  +TE FR P +SF+YERGWR
Sbjct:    97 SAASGIQVQCNTCKRSYSGNETHLDLAVASGSKRYSEPMPLSTELFRTPLVSFLYERGWR 156

Query:   152 QNFVWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSE 211
             QNF+WGGFPGPEKEFE+ K YLKPVLGGNIIDASCGSG+FSR+F +S LFSLV+ALDYSE
Sbjct:   157 QNFIWGGFPGPEKEFEMAKAYLKPVLGGNIIDASCGSGMFSRLFTRSDLFSLVIALDYSE 216

Query:   212 NMLKQCYEFVQQESNFPKE 230
             NML+QCYE + +E NFP +
Sbjct:   217 NMLRQCYELLNKEENFPNK 235


>TAIR|locus:2063218 [details] [associations]
            symbol:AT2G41040 species:3702 "Arabidopsis thaliana"
            [GO:0008152 "metabolic process" evidence=IEA] [GO:0008168
            "methyltransferase activity" evidence=IEA] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0010287 "plastoglobule"
            evidence=IDA] [GO:0080167 "response to karrikin" evidence=IEP]
            InterPro:IPR013216 Pfam:PF08241 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0080167 EMBL:AC004261 GO:GO:0008168
            GO:GO:0010287 eggNOG:COG2226 HOGENOM:HOG000006413 EMBL:AK228973
            IPI:IPI00521340 PIR:T02115 RefSeq:NP_181637.2 UniGene:At.12544
            UniGene:At.42876 ProteinModelPortal:Q0WPT7 SMR:Q0WPT7 PaxDb:Q0WPT7
            PRIDE:Q0WPT7 EnsemblPlants:AT2G41040.1 GeneID:818703
            KEGG:ath:AT2G41040 GeneFarm:3102 TAIR:At2g41040 InParanoid:Q0WPT7
            OMA:KPARTEL PhylomeDB:Q0WPT7 ProtClustDB:CLSN2680171
            Genevestigator:Q0WPT7 Uniprot:Q0WPT7
        Length = 352

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 76/157 (48%), Positives = 99/157 (63%)

Query:    71 VLACPICYKPLTWIGDXXXXXXXXXXXXXQCNTCKKTYSGVGTHFDMTAASGSKDYGELM 130
             V ACP+CY+PL   G              +C  C KTYS    + D+T  +   DY E+ 
Sbjct:    78 VFACPVCYEPLMRKGPSGINLQAIYRSGFKCGQCNKTYSSKDEYLDLTVTADLDDYNEVK 137

Query:   131 SPATEFFRMPFMSFIYERGWRQNFVWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGL 190
                TE FR P +SF+YERGWRQ F   GFPGP++EF + + Y K   GG ++D SCGSGL
Sbjct:   138 PITTELFRSPLVSFLYERGWRQAFKRSGFPGPDEEFRMAEEYFKEAEGGLLVDVSCGSGL 197

Query:   191 FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF 227
             FSR FA+SG +S V+ALDYSENML+QC EF++ ++ F
Sbjct:   198 FSRKFAQSGKYSGVIALDYSENMLRQCKEFIKNDNTF 234


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.136   0.424    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      232       209   0.00079  112 3  11 22  0.49    32
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  182 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.27u 0.12s 18.39t   Elapsed:  00:00:00
  Total cpu time:  18.27u 0.12s 18.39t   Elapsed:  00:00:00
  Start:  Sat May 11 06:56:14 2013   End:  Sat May 11 06:56:14 2013

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