BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026825
(232 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LBV4|Y1814_ARATH Uncharacterized methyltransferase At1g78140, chloroplastic
OS=Arabidopsis thaliana GN=At1g78140 PE=1 SV=1
Length = 355
Score = 246 bits (629), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 111/163 (68%), Positives = 130/163 (79%), Gaps = 1/163 (0%)
Query: 69 KNVLACPICYKPLTWIGDSSLSIESAA-GSSLQCNTCKKTYSGVGTHFDMTAASGSKDYG 127
K +LACPICY L WI + IESAA G +QCNTCK++YSG TH D+ ASGSK Y
Sbjct: 73 KKILACPICYNSLAWISQPNGLIESAASGIQVQCNTCKRSYSGNETHLDLAVASGSKRYS 132
Query: 128 ELMSPATEFFRMPFMSFIYERGWRQNFVWGGFPGPEKEFELMKGYLKPVLGGNIIDASCG 187
E M +TE FR P +SF+YERGWRQNF+WGGFPGPEKEFE+ K YLKPVLGGNIIDASCG
Sbjct: 133 EPMPLSTELFRTPLVSFLYERGWRQNFIWGGFPGPEKEFEMAKAYLKPVLGGNIIDASCG 192
Query: 188 SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKE 230
SG+FSR+F +S LFSLV+ALDYSENML+QCYE + +E NFP +
Sbjct: 193 SGMFSRLFTRSDLFSLVIALDYSENMLRQCYELLNKEENFPNK 235
>sp|Q0WPT7|Y2104_ARATH Uncharacterized methyltransferase At2g41040, chloroplastic
OS=Arabidopsis thaliana GN=At2g41040 PE=1 SV=1
Length = 352
Score = 176 bits (446), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 106/158 (67%)
Query: 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAASGSKDYGEL 129
V ACP+CY+PL G S +++++ S +C C KTYS + D+T + DY E+
Sbjct: 77 QVFACPVCYEPLMRKGPSGINLQAIYRSGFKCGQCNKTYSSKDEYLDLTVTADLDDYNEV 136
Query: 130 MSPATEFFRMPFMSFIYERGWRQNFVWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSG 189
TE FR P +SF+YERGWRQ F GFPGP++EF + + Y K GG ++D SCGSG
Sbjct: 137 KPITTELFRSPLVSFLYERGWRQAFKRSGFPGPDEEFRMAEEYFKEAEGGLLVDVSCGSG 196
Query: 190 LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF 227
LFSR FA+SG +S V+ALDYSENML+QC EF++ ++ F
Sbjct: 197 LFSRKFAQSGKYSGVIALDYSENMLRQCKEFIKNDNTF 234
>sp|D2T333|BIOC_ERWP6 Malonyl-CoA O-methyltransferase BioC OS=Erwinia pyrifoliae (strain
DSM 12163 / CIP 106111 / Ep16/96) GN=bioC PE=3 SV=1
Length = 262
Score = 38.5 bits (88), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN 226
E + + +P ++DA CG+G FS+ + G + V ALD SE ML+ E +
Sbjct: 43 ERLLEHARPGNALRVLDAGCGTGWFSQRWRAGGHW--VTALDLSEKMLQHARENQAADCY 100
Query: 227 FPKEYE 232
P + E
Sbjct: 101 LPGDIE 106
>sp|O86951|PRMA_THENE Ribosomal protein L11 methyltransferase OS=Thermotoga neapolitana
GN=prmA PE=3 SV=2
Length = 264
Score = 37.7 bits (86), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 157 GGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQ 216
G P + +K YLK G ++D CG+G+ + + K G S V+A+D E ++
Sbjct: 111 GLHPTTQMSVLFLKKYLKK--GDRVVDVGCGTGILAIVAKKLG-ASYVLAVDVDEQAVEV 167
Query: 217 CYEFVQQES 225
E VQ+ S
Sbjct: 168 AKENVQKNS 176
>sp|B9K9N3|PRMA_THENN Ribosomal protein L11 methyltransferase OS=Thermotoga neapolitana
(strain ATCC 49049 / DSM 4359 / NS-E) GN=prmA PE=3 SV=1
Length = 264
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 157 GGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQ 216
G P + +K YLK G ++D CG+G+ + + K G S V+A+D E ++
Sbjct: 111 GLHPTTQMSVFFLKKYLKK--GDRVVDVGCGTGILAIVAKKLG-ASYVMAVDVDEQAVEV 167
Query: 217 CYEFVQQES 225
E VQ+ S
Sbjct: 168 AKENVQKNS 176
>sp|Q89AK7|BIOC_BUCBP Malonyl-CoA O-methyltransferase BioC OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=bioC PE=3 SV=1
Length = 247
Score = 35.4 bits (80), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Query: 181 IIDASCGSGLFSRIFAKSGLFSLVVALDYSENML 214
I+DA CG+G FS+ + + G + V ALD+S+NML
Sbjct: 44 ILDAGCGTGWFSKKWRQLG--NTVTALDFSKNML 75
>sp|A9KGL7|UBIG_COXBN 3-demethylubiquinone-9 3-methyltransferase OS=Coxiella burnetii
(strain Dugway 5J108-111) GN=ubiG PE=3 SV=1
Length = 234
Score = 35.0 bits (79), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES 225
G +++D CG GL S AK G ++V +D SE+++ +Q+
Sbjct: 52 GKHVLDVGCGGGLLSEALAKHG--AIVTGVDMSESLIDVAKNHAEQQQ 97
>sp|B6J5Y2|UBIG_COXB1 3-demethylubiquinone-9 3-methyltransferase OS=Coxiella burnetii
(strain CbuK_Q154) GN=ubiG PE=3 SV=1
Length = 234
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES 225
G +++D CG GL S AK G ++V +D SE+++ +Q+
Sbjct: 52 GKHVLDVGCGGGLLSEALAKHG--AIVTGVDMSESLIDVAKNHAEQQQ 97
>sp|Q820B5|UBIG_COXBU 3-demethylubiquinone-9 3-methyltransferase OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=ubiG PE=3 SV=1
Length = 234
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES 225
G +++D CG GL S AK G ++V +D SE+++ +Q+
Sbjct: 52 GKHVLDVGCGGGLLSEALAKHG--AIVTGVDMSESLIDVAKNHAEQQQ 97
>sp|A9NBI0|UBIG_COXBR 3-demethylubiquinone-9 3-methyltransferase OS=Coxiella burnetii
(strain RSA 331 / Henzerling II) GN=ubiG PE=3 SV=1
Length = 234
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES 225
G +++D CG GL S AK G ++V +D SE+++ +Q+
Sbjct: 52 GKHVLDVGCGGGLLSEALAKHG--AIVTGVDMSESLIDVAKNHAEQQQ 97
>sp|B6J1W2|UBIG_COXB2 3-demethylubiquinone-9 3-methyltransferase OS=Coxiella burnetii
(strain CbuG_Q212) GN=ubiG PE=3 SV=1
Length = 234
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES 225
G +++D CG GL S AK G ++V +D SE+++ +Q+
Sbjct: 52 GKHVLDVGCGGGLLSEALAKHG--AIVTGVDMSESLIDVAKNHAEQQQ 97
>sp|P67055|UBIE_LISMO Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=ubiE PE=3
SV=1
Length = 237
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 178 GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQ 223
G N++D CG+ +S + A+ G V LD+SENMLK E V++
Sbjct: 48 GTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKE 94
>sp|Q71Y84|UBIE_LISMF Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serotype 4b (strain F2365) GN=ubiE PE=3 SV=1
Length = 237
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 178 GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQ 223
G N++D CG+ +S + A+ G V LD+SENMLK E V++
Sbjct: 48 GTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKE 94
>sp|C1KWN1|UBIE_LISMC Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serotype 4b (strain CLIP80459) GN=ubiE PE=3 SV=1
Length = 237
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 178 GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQ 223
G N++D CG+ +S + A+ G V LD+SENMLK E V++
Sbjct: 48 GTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKE 94
>sp|P67056|UBIE_LISIN Demethylmenaquinone methyltransferase OS=Listeria innocua serovar
6a (strain CLIP 11262) GN=ubiE PE=3 SV=1
Length = 237
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 178 GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQ 223
G N++D CG+ +S + A+ G V LD+SENMLK E V++
Sbjct: 48 GTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKE 94
>sp|A0AK43|UBIE_LISW6 Demethylmenaquinone methyltransferase OS=Listeria welshimeri
serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
GN=ubiE PE=3 SV=1
Length = 236
Score = 34.7 bits (78), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 178 GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQ 223
G N++D CG+ +S + A+ G V LD+SENMLK E V++
Sbjct: 48 GTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKE 94
>sp|B6JCF0|RSMH_OLICO Ribosomal RNA small subunit methyltransferase H OS=Oligotropha
carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)
GN=rsmH PE=3 SV=1
Length = 333
Score = 34.3 bits (77), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 172 YLKPVLGGNIIDASCGSGLFS-RIFAKSGLFSLVVALDYSENMLKQCYEFVQQ 223
+L P GG +DA+ G+G +S RI A +G + V+ +D + + ++ V+Q
Sbjct: 19 FLAPRAGGIYVDATFGAGGYSRRILAVAG--ARVIGIDRDRTAIAEAFDLVEQ 69
>sp|Q9PAM5|UBIG_XYLFA 3-demethylubiquinone-9 3-methyltransferase OS=Xylella fastidiosa
(strain 9a5c) GN=ubiG PE=3 SV=1
Length = 246
Score = 34.3 bits (77), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
Query: 156 WGGFPGPEKEFELMK----GYLK---PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALD 208
W GP+K + Y+ P+ G ++D CG GL S A+ G + V A+D
Sbjct: 27 WWDPHGPQKPLHALNPVRLDYISKRVPLSGARVLDVGCGGGLLSEALARQG--AHVTAID 84
Query: 209 YSENMLK 215
+ ++K
Sbjct: 85 LAPELIK 91
>sp|Q24W96|UBIE_DESHY Demethylmenaquinone methyltransferase OS=Desulfitobacterium
hafniense (strain Y51) GN=ubiE PE=3 SV=1
Length = 253
Score = 34.3 bits (77), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 16/80 (20%)
Query: 141 FMSFIYERGWRQNFVWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-G 199
MSF ++GWR+ V P G ++D CG+ S A + G
Sbjct: 43 LMSFGLDKGWRKKAVQTVEAKP---------------GMTMVDICCGTAQLSLELAMTVG 87
Query: 200 LFSLVVALDYSENMLKQCYE 219
+ LD+SENMLK+ E
Sbjct: 88 EQGQITGLDFSENMLKKAQE 107
>sp|Q3UH06|RREB1_MOUSE Ras-responsive element-binding protein 1 OS=Mus musculus GN=Rreb1
PE=1 SV=2
Length = 1700
Score = 34.3 bits (77), Expect = 0.83, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Query: 31 PSPIFIRKFVAKIRASSTAFVETKPSEPSFVENEAS-----TSKNVLACPICYKPLTWIG 85
PSP+ R+ +K + S A E VE+ S S + CP+C+K
Sbjct: 160 PSPLKRRRLSSKRKLSHDAESEDPGPAKKMVEDGQSGDLDKMSDEIFHCPVCFKEFVCKY 219
Query: 86 DSSLSIESAAGSSLQCNTCKKTY 108
+ +E+ + + L+C+ C T+
Sbjct: 220 ELETHMETHSDNPLRCDICCVTF 242
>sp|Q8F201|Y2977_LEPIN Uncharacterized RNA methyltransferase LA_2977 OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar Lai
(strain 56601) GN=LA_2977 PE=3 SV=1
Length = 454
Score = 33.9 bits (76), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 23/117 (19%)
Query: 116 DMTAASGSKDYGELMSPATEFFRMPFMSFIYERGWRQNFVWGGFPGPEKEFELMKGYLK- 174
++ G Y EL+ FR+PF SF P PE F+ + +++
Sbjct: 251 EIKILKGMDSYKELVCGKE--FRVPFDSFFQ-------------PNPEG-FQPILDFIEK 294
Query: 175 --PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPK 229
P +++D CGSG FSRIFA F + +D E+ L+ + Q +FPK
Sbjct: 295 EIPDSFDHLVDLFCGSGFFSRIFAHK--FLKITGIDSIESSLEIARK--QMSLDFPK 347
>sp|Q72TD6|Y1085_LEPIC Uncharacterized RNA methyltransferase LIC_11085 OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar
copenhageni (strain Fiocruz L1-130) GN=LIC_11085 PE=3
SV=1
Length = 454
Score = 33.9 bits (76), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 23/117 (19%)
Query: 116 DMTAASGSKDYGELMSPATEFFRMPFMSFIYERGWRQNFVWGGFPGPEKEFELMKGYLK- 174
++ G Y EL+ FR+PF SF P PE F+ + +++
Sbjct: 251 EIKILKGMDSYKELVCGKE--FRVPFDSFFQ-------------PNPEG-FQPILDFIEK 294
Query: 175 --PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPK 229
P +++D CGSG FSRIFA F + +D E+ L+ + Q +FPK
Sbjct: 295 EIPDSFDHLVDLFCGSGFFSRIFAHK--FLKITGIDSIESSLEIARK--QMSLDFPK 347
>sp|A5IN97|PRMA_THEP1 Ribosomal protein L11 methyltransferase OS=Thermotoga petrophila
(strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=prmA PE=3
SV=1
Length = 264
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ 223
+K YLK G ++D CG+G+ + I AK S VVA+D E ++ E V++
Sbjct: 123 LKKYLKE--GNTVLDVGCGTGILA-IAAKKLGASQVVAVDVDEQAVEVAEENVRK 174
>sp|Q9X0G8|PRMA_THEMA Ribosomal protein L11 methyltransferase OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=prmA PE=3 SV=1
Length = 264
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ 223
+K YLK G ++D CG+G+ + I AK S VVA+D E ++ E V++
Sbjct: 123 LKKYLKE--GNTVLDVGCGTGILA-IAAKKLGASRVVAVDVDEQAVEVAEENVRK 174
>sp|B8DBZ5|UBIE_LISMH Demethylmenaquinone methyltransferase OS=Listeria monocytogenes
serotype 4a (strain HCC23) GN=ubiE PE=3 SV=1
Length = 237
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 178 GGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQ 223
G N++D CG+ +S + A+ G V LD+SENMLK E V +
Sbjct: 48 GTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVTE 94
>sp|D8MPW4|BIOC_ERWBE Malonyl-CoA O-methyltransferase BioC OS=Erwinia billingiae (strain
Eb661) GN=bioC PE=3 SV=1
Length = 251
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN 226
E + Y G ++DA CG G FS+ + +G + V ALD S ML Q +
Sbjct: 32 EELASYATRRQGQKVLDAGCGPGWFSQHWRAAG--NHVTALDLSAEMLVQAQALHTADCY 89
Query: 227 FPKEYE 232
P + E
Sbjct: 90 QPGDIE 95
>sp|B1L841|PRMA_THESQ Ribosomal protein L11 methyltransferase OS=Thermotoga sp. (strain
RQ2) GN=prmA PE=3 SV=1
Length = 264
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ 223
+K YLK G ++D CG+G+ + I AK S VVA+D E ++ E V++
Sbjct: 123 LKKYLKE--GNTVLDVGCGTGILA-IAAKKLGASQVVAVDVDEQAVEVAEENVRK 174
>sp|Q8PK00|UBIG_XANAC 3-demethylubiquinone-9 3-methyltransferase OS=Xanthomonas
axonopodis pv. citri (strain 306) GN=ubiG PE=3 SV=1
Length = 239
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Query: 156 WGGFPGPEK--------EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVAL 207
W GP+K E + L+P G ++D CG GL S A+ G + V A+
Sbjct: 27 WWDADGPQKPLHALNPVRLEYVSARLEPA-GARVLDVGCGGGLLSESMARLG--AQVTAI 83
Query: 208 DYSENMLK 215
D + ++K
Sbjct: 84 DLAPELVK 91
>sp|Q6D3C1|BIOC_ERWCT Malonyl-CoA O-methyltransferase BioC OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=bioC
PE=3 SV=1
Length = 253
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENML 214
G ++DA CG+G FSR + ++G V ALD S ML
Sbjct: 45 GLQVLDAGCGTGHFSRYWRQAG--RNVTALDLSAEML 79
>sp|P36571|BIOC_SERMA Malonyl-CoA O-methyltransferase BioC OS=Serratia marcescens GN=bioC
PE=1 SV=1
Length = 255
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLK 215
G ++DA CG+G FSR++ + G V ALD + ML
Sbjct: 47 GEQLLDAGCGTGYFSRMWRERG--KRVTALDLAPGMLD 82
>sp|A9KKT8|PRMA_CLOPH Ribosomal protein L11 methyltransferase OS=Clostridium
phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg)
GN=prmA PE=3 SV=1
Length = 333
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219
+K Y++P G ++D CGSG+ + I K G + VA+D EN + E
Sbjct: 167 IKKYMQP--GATLLDVGCGSGILTIIGRKLGAKT-AVAIDIDENAVSASKE 214
>sp|P44150|Y1273_HAEIN Uncharacterized protein HI_1273 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1273 PE=4 SV=1
Length = 268
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 181 IIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ 223
++D CG G F+ A+ G S V ALDYS ML +F Q+
Sbjct: 63 VLDIGCGPGTFAVPLAQQG--STVYALDYSNGMLDCLAQFKQK 103
>sp|Q9NZJ6|COQ3_HUMAN Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial
OS=Homo sapiens GN=COQ3 PE=1 SV=3
Length = 369
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLK--QCYE 219
KP+LG I+D CG GL + + G + V+ +D + +K QC++
Sbjct: 143 KPLLGMKILDVGCGGGLLTEPLGRLG--ASVIGIDPVDENIKTAQCHK 188
>sp|A9WRT1|UBIE_RENSM Demethylmenaquinone methyltransferase OS=Renibacterium salmoninarum
(strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589
/ NCIMB 2235) GN=ubiE PE=3 SV=1
Length = 237
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLK 215
V G ++D + G+G S +A +GL VVALD+S MLK
Sbjct: 50 VPGQRVLDVAAGTGTSSEPYADAGLD--VVALDFSLGMLK 87
>sp|Q92766|RREB1_HUMAN Ras-responsive element-binding protein 1 OS=Homo sapiens GN=RREB1
PE=1 SV=3
Length = 1687
Score = 32.0 bits (71), Expect = 3.2, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 31 PSPIFIRKFVAKIRASSTAFVETKPSEPS--FVENEAS-----TSKNVLACPICYKPLTW 83
PSP+ R+ +K + S A E + P+ VE+ S + V CP+C+K
Sbjct: 160 PSPLKRRRLSSKRKLSHDAESEREDPAPAKKMVEDGQSGDLEKKADEVFHCPVCFKEFVC 219
Query: 84 IGDSSLSIESAAGSSLQCNTCKKTY 108
+E+ + + L+C+ C T+
Sbjct: 220 KYGLETHMETHSDNPLRCDICCVTF 244
>sp|Q2SL27|RLMD_HAHCH 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Hahella
chejuensis (strain KCTC 2396) GN=rlmD PE=3 SV=1
Length = 446
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 172 YLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCY 218
+L+P G I+D CG G F+ A+S + VV ++ SE+M+++ Y
Sbjct: 291 WLQPQAGETILDLFCGLGNFTLPIARSA--AHVVGVEGSEDMVRRGY 335
>sp|P97489|GATA5_MOUSE Transcription factor GATA-5 OS=Mus musculus GN=Gata5 PE=2 SV=2
Length = 404
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 38 KFVAKIRASSTAFVETKPSEPSFVENEASTS----KNVLACPICYKPLTWIGDSSLSIES 93
K AKI+ SS + T S P+ + +E+S + ++ LA P+C P SS + ES
Sbjct: 302 KNPAKIKGSSGSTANTTASSPTLLNSESSATTLKAESSLASPVCAGPTITSQASSPADES 361
Query: 94 AAGSSLQ 100
A S L+
Sbjct: 362 LASSHLE 368
>sp|Q0WVD6|ANM3_ARATH Probable protein arginine N-methyltransferase 3 OS=Arabidopsis
thaliana GN=PRMT3 PE=2 SV=1
Length = 601
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF 227
G ++D CG+G+ S AK+G S VVA++ SE M K + + F
Sbjct: 281 GSVVMDVGCGTGILSLFAAKAGA-SRVVAVEASEKMAKVATKIAKDNKVF 329
>sp|A2YP56|ANM3_ORYSI Probable protein arginine N-methyltransferase 3 OS=Oryza sativa
subsp. indica GN=PRMT3 PE=2 SV=1
Length = 620
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ 222
G ++D CG+G+ S AK+G S V+A+D S M+ E +
Sbjct: 292 GATVLDVGCGTGILSLFAAKAGA-SRVIAVDGSAKMVSVATEVTK 335
>sp|A3BMN9|ANM3_ORYSJ Probable protein arginine N-methyltransferase 3 OS=Oryza sativa
subsp. japonica GN=PRMT3 PE=2 SV=1
Length = 620
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ 222
G ++D CG+G+ S AK+G S V+A+D S M+ E +
Sbjct: 292 GATVLDVGCGTGILSLFAAKAGA-SRVIAVDGSAKMVSVATEVAK 335
>sp|Q54XD0|COQ3_DICDI Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial
OS=Dictyostelium discoideum GN=coq3 PE=3 SV=1
Length = 321
Score = 31.6 bits (70), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSEN 212
P+ G N+ID CG GL + ++ G S VV LD ++N
Sbjct: 125 PLEGLNVIDVGCGVGLLTESLSRLGA-SKVVGLDAAKN 161
>sp|Q8EXJ3|UBIE_LEPIN Demethylmenaquinone methyltransferase OS=Leptospira interrogans
serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
GN=ubiE PE=3 SV=1
Length = 249
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 143 SFIYERGWRQNFVWGGFPGPEKEFEL-MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF 201
SF+ R W+ + V +E E G+L +++D CG+G S S
Sbjct: 35 SFLLHRVWKNHLV--------REIENNFSGHL------HVLDLCCGTGDISLRLENSSFV 80
Query: 202 SLVVALDYSENMLK 215
V +D+SENML+
Sbjct: 81 DHVTCVDFSENMLE 94
>sp|Q75FL1|UBIE_LEPIC Demethylmenaquinone methyltransferase OS=Leptospira interrogans
serogroup Icterohaemorrhagiae serovar copenhageni
(strain Fiocruz L1-130) GN=ubiE PE=3 SV=1
Length = 249
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 143 SFIYERGWRQNFVWGGFPGPEKEFEL-MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF 201
SF+ R W+ + V +E E G+L +++D CG+G S S
Sbjct: 35 SFLLHRVWKNHLV--------REIENNFSGHL------HVLDLCCGTGDISLRLENSSFV 80
Query: 202 SLVVALDYSENMLK 215
V +D+SENML+
Sbjct: 81 DHVTCVDFSENMLE 94
>sp|Q7VHY7|PRMA_HELHP Ribosomal protein L11 methyltransferase OS=Helicobacter hepaticus
(strain ATCC 51449 / 3B1) GN=prmA PE=3 SV=1
Length = 317
Score = 31.6 bits (70), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQC 217
+ G ++D CGSG+ S A L + V A D EN +K+C
Sbjct: 181 IQGKTLLDVGCGSGILS--IASCKLGAQVYACDTDENAIKEC 220
>sp|Q0AWM5|PRMA_SYNWW Ribosomal protein L11 methyltransferase OS=Syntrophomonas wolfei
subsp. wolfei (strain Goettingen) GN=prmA PE=3 SV=1
Length = 307
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ 222
G +IDA CGSG+ S AK G + V+A+D E +K E V+
Sbjct: 170 GEKLIDAGCGSGILSIAAAKLGA-ARVLAMDVEELSVKIARENVE 213
>sp|C4LL93|UBIE_CORK4 Demethylmenaquinone methyltransferase OS=Corynebacterium
kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=ubiE
PE=3 SV=1
Length = 229
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLK 215
L P G ++D + G+G+ + +KSG +LVV D+S MLK
Sbjct: 47 LDPKPGEKVVDLAAGTGVSTAELSKSG--ALVVGCDFSLGMLK 87
>sp|A6LJG3|PRMA_THEM4 Ribosomal protein L11 methyltransferase OS=Thermosipho
melanesiensis (strain BI429 / DSM 12029) GN=prmA PE=3
SV=1
Length = 258
Score = 30.8 bits (68), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES 225
L+K YL+ G +++D CGSG+ S I AK S V+A+D + ++ E V++ +
Sbjct: 123 LLKKYLRQ--GMDVLDLGCGSGILS-ILAKKLGASGVLAVDNDKMAVESAIENVEKNN 177
>sp|Q9SRU2|BIG_ARATH Auxin transport protein BIG OS=Arabidopsis thaliana GN=BIG PE=1 SV=2
Length = 5098
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 59 SFVENEASTSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKK-TYSGVGTHFDM 117
SF EN + S L CP C +P+T D + ++ QC C+ Y + + +
Sbjct: 3449 SFYENLQALSLEPLQCPRCSRPVT---DKHGICSNCHENAYQCRQCRNINYENLDSF--L 3503
Query: 118 TAASGSKDYGELMSPATEFFRMPFMSFIYERGWRQNFVWGGFPGPE-------KEFELMK 170
G YG EF M SFI++ + G E K ++ +
Sbjct: 3504 CNECGYSKYGRF-----EFNFMAKPSFIFDNMENDEDMKKGLAAIESESENAHKRYQQLL 3558
Query: 171 GYLKPVL 177
G+ KP+L
Sbjct: 3559 GFKKPLL 3565
>sp|B0V4Z1|RSMC_ACIBY Ribosomal RNA small subunit methyltransferase C OS=Acinetobacter
baumannii (strain AYE) GN=rsmC PE=3 SV=1
Length = 337
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 172 YLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALD 208
YL V G I D CG+G+ S AK+ +++ ALD
Sbjct: 189 YLNQVKSGRIADFGCGAGIISCYLAKANSSNIIHALD 225
>sp|B7GWT8|RSMC_ACIB3 Ribosomal RNA small subunit methyltransferase C OS=Acinetobacter
baumannii (strain AB307-0294) GN=rsmC PE=3 SV=1
Length = 337
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 172 YLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALD 208
YL V G I D CG+G+ S AK+ +++ ALD
Sbjct: 189 YLNQVKSGRIADFGCGAGIISCYLAKANSSNIIHALD 225
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,972,318
Number of Sequences: 539616
Number of extensions: 3389811
Number of successful extensions: 8947
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 8932
Number of HSP's gapped (non-prelim): 69
length of query: 232
length of database: 191,569,459
effective HSP length: 114
effective length of query: 118
effective length of database: 130,053,235
effective search space: 15346281730
effective search space used: 15346281730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)