BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026826
(232 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255549562|ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223545062|gb|EEF46575.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 232
Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/233 (83%), Positives = 211/233 (90%), Gaps = 2/233 (0%)
Query: 1 MADGYWRYSDARQPQSA-LPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
MAD YWRYSDARQPQ +P+LV KR R+DYDV SGHEL +YYTRDDDRGALR +RDTDS
Sbjct: 1 MADAYWRYSDARQPQQQPIPTLVGKRSRSDYDVTSGHELPNYYTRDDDRGALRAIRDTDS 60
Query: 60 LGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG 119
+GASYDRYLRSA ISSYSGGQSAR +SG +P+R DDPRI+GIGG+DPGP+ KDR LGLG
Sbjct: 61 IGASYDRYLRSAPISSYSGGQSARPISG-VPNRVADDPRIMGIGGLDPGPTVKDRTLGLG 119
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GR E LPPDA+STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR PGGDPL+L
Sbjct: 120 SGRPETSLPPDATSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRRPGGDPLVL 179
Query: 180 CFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
CFVDF+SPAHAATAMDALQGY+FDEHDRDSV LRLQFARYPGARSGGGHRGKR
Sbjct: 180 CFVDFLSPAHAATAMDALQGYKFDEHDRDSVHLRLQFARYPGARSGGGHRGKR 232
>gi|427199356|gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
Length = 233
Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/233 (81%), Positives = 210/233 (90%), Gaps = 1/233 (0%)
Query: 1 MADGYWRYSDARQPQ-SALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
MAD YWRY D+RQP +L +V KR R+DYDVPSGHEL SY++RDD+RG LRGMRDTDS
Sbjct: 1 MADAYWRYGDSRQPPPQSLTQIVGKRSRSDYDVPSGHELPSYFSRDDERGTLRGMRDTDS 60
Query: 60 LGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG 119
+GASYDRYLRSAQ+SSY GGQSAR +SGGM SR VDDPRIVG+G ++P + KDR LG G
Sbjct: 61 IGASYDRYLRSAQVSSYGGGQSARPISGGMSSRAVDDPRIVGMGSVEPATTVKDRTLGYG 120
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GGR EVPLPPDASSTLFVEGLPS+C+RREVAHIFRPFVGYKEVRLVSKESRHPGGDPL+L
Sbjct: 121 GGRPEVPLPPDASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLVL 180
Query: 180 CFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
CFVDF+SPAHAATAMDALQGY+FDEHDRDSV LRLQFARYPGARSGGGHRGKR
Sbjct: 181 CFVDFLSPAHAATAMDALQGYKFDEHDRDSVSLRLQFARYPGARSGGGHRGKR 233
>gi|224118350|ref|XP_002317797.1| predicted protein [Populus trichocarpa]
gi|222858470|gb|EEE96017.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 186/234 (79%), Positives = 206/234 (88%), Gaps = 3/234 (1%)
Query: 1 MADGYWRYS-DARQ-PQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTD 58
MAD YWRY+ D+RQ P ++ SL KRPR DYD+PSG +LSSYY+RDDDRGAL +RD+D
Sbjct: 1 MADSYWRYAGDSRQQPPQSMSSLTGKRPRIDYDIPSGRDLSSYYSRDDDRGALHVIRDSD 60
Query: 59 SLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGL 118
S+GASYDRYLRS +SSY GGQSAR MSG +PS PVDD R+V +G MDPG S KDR+L +
Sbjct: 61 SIGASYDRYLRSGTVSSYGGGQSARAMSG-VPSHPVDDTRMVSMGPMDPGASVKDRSLRM 119
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G GRSEV LPPDASSTLFVEGLPSDC+RREV+HIFRPFVGYKEVRLVSKESRHPGGDPL+
Sbjct: 120 GSGRSEVSLPPDASSTLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRHPGGDPLV 179
Query: 179 LCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
LCFVDF+SPAHAATAMDALQGYRFDEHDRDS LRLQFARYPGARSGGGHRGKR
Sbjct: 180 LCFVDFLSPAHAATAMDALQGYRFDEHDRDSFHLRLQFARYPGARSGGGHRGKR 233
>gi|302143942|emb|CBI23047.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/232 (75%), Positives = 203/232 (87%), Gaps = 2/232 (0%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
MAD YWRY + RQP +PSL +KRPR+DYDVP GH+L SY++R+D+R A R +RD+DS+
Sbjct: 1 MADPYWRYGEVRQP-PPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSI 59
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
GASYDRYLR+AQ+ SY GG S R +SGG+ S PVDDPR+VG+ G+D G + K ++LG G
Sbjct: 60 GASYDRYLRNAQMPSY-GGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSG 118
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
GR E+PLPPDASSTLFVEGLP++C+RREV+HIFRPFVGYKEVRLVSKESRH GGDPL+LC
Sbjct: 119 GRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLC 178
Query: 181 FVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
FVDFVSPAHAATAMDALQGY+FDEHDRDSV LRLQFARYPGARSGGGHRGKR
Sbjct: 179 FVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYPGARSGGGHRGKR 230
>gi|224135091|ref|XP_002321981.1| predicted protein [Populus trichocarpa]
gi|222868977|gb|EEF06108.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/233 (77%), Positives = 198/233 (84%), Gaps = 14/233 (6%)
Query: 1 MADGYWRYS-DARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
MAD YWRY+ D+RQPQ L DVPSG +LSSYY+RDDDRGALR +RD+DS
Sbjct: 1 MADSYWRYAGDSRQPQPHL------------DVPSGRDLSSYYSRDDDRGALRVIRDSDS 48
Query: 60 LGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG 119
+GASYDRYL S ISSY GGQSAR +SG +P RPVDD R+V +G MDPG S KDR++ G
Sbjct: 49 IGASYDRYLHSGTISSYGGGQSARAISG-VPVRPVDDLRMVSMGSMDPGSSVKDRSMRTG 107
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GRSEV LPPDASSTLFVEGLPSDC+RREV+HIFRPFVGYKEVRLVSKESRHPGGDPL+L
Sbjct: 108 SGRSEVSLPPDASSTLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRHPGGDPLVL 167
Query: 180 CFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
CFVDF+SPAHAAT+MDALQGYRFDEHDRDSV LRLQFARYPGARSGGGHRGKR
Sbjct: 168 CFVDFLSPAHAATSMDALQGYRFDEHDRDSVDLRLQFARYPGARSGGGHRGKR 220
>gi|359490723|ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
Length = 229
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 173/232 (74%), Positives = 202/232 (87%), Gaps = 3/232 (1%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
MAD YWRY + RQP +PSL +KRPR+DYDVP GH+L SY++R+D+R A R +RD+DS+
Sbjct: 1 MADPYWRYGEVRQP-PPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSI 59
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
GASYDRYLR+A + SY GG S R +SGG+ S PVDDPR+VG+ G+D G + K ++LG G
Sbjct: 60 GASYDRYLRNA-MPSY-GGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSG 117
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
GR E+PLPPDASSTLFVEGLP++C+RREV+HIFRPFVGYKEVRLVSKESRH GGDPL+LC
Sbjct: 118 GRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLC 177
Query: 181 FVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
FVDFVSPAHAATAMDALQGY+FDEHDRDSV LRLQFARYPGARSGGGHRGKR
Sbjct: 178 FVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYPGARSGGGHRGKR 229
>gi|449456997|ref|XP_004146235.1| PREDICTED: uncharacterized protein LOC101218789 [Cucumis sativus]
gi|449529543|ref|XP_004171759.1| PREDICTED: uncharacterized protein LOC101224897 [Cucumis sativus]
Length = 232
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/233 (68%), Positives = 191/233 (81%), Gaps = 2/233 (0%)
Query: 1 MADGYWRYSDARQ-PQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
M+D YWRY+D++Q P S++P +V KRPR DYD HEL +YY R DDR L+G++ DS
Sbjct: 1 MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60
Query: 60 LGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG 119
+ SY+RYLR++QISSY GGQSAR + GG+P P++DP I+G+GG+ G + DR+ G
Sbjct: 61 INESYERYLRTSQISSY-GGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFG 119
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GGR +PLPPDAS+TLFVEGLPS C+RREVAHIFRPFVGYKEVRLV+KESR G DP++L
Sbjct: 120 GGRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVL 179
Query: 180 CFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
FVDFVSPAHAATAMDALQGY+FDE DRDSV LRLQFAR+PGARSGGGHRGKR
Sbjct: 180 GFVDFVSPAHAATAMDALQGYKFDEFDRDSVNLRLQFARFPGARSGGGHRGKR 232
>gi|363807818|ref|NP_001241926.1| uncharacterized protein LOC100786188 [Glycine max]
gi|255640386|gb|ACU20480.1| unknown [Glycine max]
Length = 230
Score = 323 bits (828), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 159/232 (68%), Positives = 188/232 (81%), Gaps = 2/232 (0%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY A + + A S+ KR R+DYDV H+L SY+ DDDRG LR +RDT+SL
Sbjct: 1 MSDAYWRY--AAESRQAPSSIAGKRSRSDYDVSGVHDLPSYFPHDDDRGGLRVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
ASY+RYLRSAQ+SSY GQS R + G +P+R +DD + IGG+D G +AKD+ GL
Sbjct: 59 DASYERYLRSAQVSSYGSGQSTRTIDGRIPNRAIDDSHVANIGGVDRGTNAKDKMPGLSS 118
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
GR++ LPPDA+STLFVEGLPS+C+RREVAHIFRPFVGYKEVRLVSKESR PGGDPL+LC
Sbjct: 119 GRADHSLPPDATSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLVLC 178
Query: 181 FVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
FVDF+SPAHAATAM+ALQGY+FDE DR+SV LR QFARYPGARSGG HRGKR
Sbjct: 179 FVDFMSPAHAATAMEALQGYKFDELDRNSVNLRFQFARYPGARSGGVHRGKR 230
>gi|363818125|ref|NP_001242627.1| uncharacterized protein LOC100800440 [Glycine max]
gi|255644702|gb|ACU22853.1| unknown [Glycine max]
Length = 230
Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/232 (68%), Positives = 187/232 (80%), Gaps = 2/232 (0%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY A + + A S+ KR R+DYDV H+L Y+ DDDRG LR +RDT+SL
Sbjct: 1 MSDAYWRY--AAESRQAPSSIAGKRSRSDYDVSGVHDLPGYFPHDDDRGGLRVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
ASY+RYLRSAQ+SSY GQS R +SG +P+R +DD + IGG+D G +AKD+ LGL
Sbjct: 59 DASYERYLRSAQVSSYGSGQSTRTISGRIPNRAIDDSHVANIGGIDRGTNAKDKMLGLSS 118
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
GR++ LPPDA+STLFVEGLP +C+RREVAHIF PFVGYKEVRLVSKESR PGGDPL+LC
Sbjct: 119 GRTDHSLPPDATSTLFVEGLPPNCTRREVAHIFPPFVGYKEVRLVSKESRQPGGDPLVLC 178
Query: 181 FVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
FVDF+SPAHAATAM+ALQGY+FDE DR+SV LR QFARYPGARSGG HRGKR
Sbjct: 179 FVDFLSPAHAATAMEALQGYKFDELDRNSVNLRFQFARYPGARSGGVHRGKR 230
>gi|388504624|gb|AFK40378.1| unknown [Medicago truncatula]
Length = 228
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/232 (65%), Positives = 185/232 (79%), Gaps = 4/232 (1%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY++++Q A P++ KRPRT+YDV H L++Y+ DDDRG L+ +RDT+SL
Sbjct: 1 MSDAYWRYAESQQ--HAPPTIPGKRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
ASY+RYLR+A ISS+ GQS R + GG+PS +DD + +GG+D + K + L L G
Sbjct: 59 DASYERYLRNA-ISSHGSGQSTRTIDGGVPSHSIDDSHVTSMGGVDRRTNVKGQILELSG 117
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
GR + LPP A++TLFVEGLPS+C+RREVAHIFRPFVGYKEVRLVSKESR PGGDPL+LC
Sbjct: 118 GRPDHSLPPGATNTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLLLC 177
Query: 181 FVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
FVDFVSPAHAATAMDAL GY+FDE DR+SV LR QFAR PG RSGGGHRGKR
Sbjct: 178 FVDFVSPAHAATAMDALHGYKFDELDRNSVNLRFQFARNPG-RSGGGHRGKR 228
>gi|357464011|ref|XP_003602287.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355491335|gb|AES72538.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 258
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/236 (63%), Positives = 184/236 (77%), Gaps = 9/236 (3%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY++++Q A P++ KRPRT+YDV H L++Y+ DDDRG L+ +RDT+SL
Sbjct: 1 MSDAYWRYAESQQ--HAPPTIPGKRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
ASY+RYLR+A ISS+ GQS R + GG+PS +DD + +GG+D + KD+ L L G
Sbjct: 59 DASYERYLRNA-ISSHGSGQSTRTIDGGVPSHSIDDSHVTSMGGVDRRTNVKDQILELSG 117
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHI-----FRPFVGYKEVRLVSKESRHPGGD 175
GR + LPP A++TLFVEGLPS+C+RREVA I FRPFVGYKEVRLVSKESR PGGD
Sbjct: 118 GRPDHSLPPGATNTLFVEGLPSNCTRREVARILSSDIFRPFVGYKEVRLVSKESRQPGGD 177
Query: 176 PLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGK 231
PL+LCFVDFVSPAHAATAMDAL GY+FDE DR+SV LR QFAR PG RSGGGHRGK
Sbjct: 178 PLLLCFVDFVSPAHAATAMDALHGYKFDELDRNSVNLRFQFARNPG-RSGGGHRGK 232
>gi|388505956|gb|AFK41044.1| unknown [Lotus japonicus]
Length = 232
Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 146/221 (66%), Positives = 173/221 (78%), Gaps = 4/221 (1%)
Query: 1 MADGYWRYS-DARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
M+D YWRY+ ++R SA+ +KR R+DYDV H++ YY DDDRG LR +RDT+S
Sbjct: 1 MSDAYWRYAAESRHNPSAI---AAKRARSDYDVSGVHDMPGYYPHDDDRGGLRVIRDTES 57
Query: 60 LGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG 119
L ASY+RYLRSAQ+SS+ GQS R + G +PS DD + IGG+D GPSAK++ LGL
Sbjct: 58 LDASYERYLRSAQVSSFGEGQSTRTIRGRLPSHSFDDSHVTSIGGVDRGPSAKEKILGLS 117
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GR + LPPDA+STLFVEGLP++C RREVAHIFRPFVGYKEVRLVSKESR PGGDPL+L
Sbjct: 118 SGRPDHSLPPDATSTLFVEGLPTNCPRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLVL 177
Query: 180 CFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYP 220
CFVDF SPAHAATA DALQGY+FDE DR+S LR QFARYP
Sbjct: 178 CFVDFESPAHAATAKDALQGYKFDELDRNSANLRFQFARYP 218
>gi|374256077|gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
guineensis]
Length = 294
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/247 (59%), Positives = 183/247 (74%), Gaps = 18/247 (7%)
Query: 1 MADGYWRYSDARQPQSALPSLVS--KRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDT 57
MAD YWRYSD R +A+ + + KRPR DY D+P G E+ YY+RD++R R +RDT
Sbjct: 35 MADAYWRYSDPRHQAAAMAAPTAPLKRPRADYADIPGGPEVLGYYSRDEERTGHRTIRDT 94
Query: 58 DSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMD----------- 106
+S+ ASYDRYLR+ S+ G+S R ++GGM PVDD R++G+GGMD
Sbjct: 95 ESIAASYDRYLRNG--VSFGAGESVRTVAGGMTGHPVDDRRMMGVGGMDGRTVGYGGGRP 152
Query: 107 --PGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
P R++G GGGR E PLP DAS+TLFVEGLP++C+RREV+HIFRPFVG++EVRL
Sbjct: 153 EPPLGGMDGRSVGYGGGRPEPPLPQDASNTLFVEGLPANCTRREVSHIFRPFVGFREVRL 212
Query: 165 VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARS 224
V+KESRHPGGDPL+LCFVDF +PA AA A+DALQGY+FDEHDR+S LRLQFAR+PG RS
Sbjct: 213 VNKESRHPGGDPLVLCFVDFSTPAQAAVALDALQGYKFDEHDRESANLRLQFARFPGPRS 272
Query: 225 GGGHRGK 231
GG RGK
Sbjct: 273 SGGPRGK 279
>gi|357464013|ref|XP_003602288.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355491336|gb|AES72539.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 243
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/199 (63%), Positives = 158/199 (79%), Gaps = 3/199 (1%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY++++Q A P++ KRPRT+YDV H L++Y+ DDDRG L+ +RDT+SL
Sbjct: 1 MSDAYWRYAESQQ--HAPPTIPGKRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
ASY+RYLR+A ISS+ GQS R + GG+PS +DD + +GG+D + KD+ L L G
Sbjct: 59 DASYERYLRNA-ISSHGSGQSTRTIDGGVPSHSIDDSHVTSMGGVDRRTNVKDQILELSG 117
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
GR + LPP A++TLFVEGLPS+C+RREVAHIFRPFVGYKEVRLVSKESR PGGDPL+LC
Sbjct: 118 GRPDHSLPPGATNTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLLLC 177
Query: 181 FVDFVSPAHAATAMDALQG 199
FVDFVSPAHAATAMDAL G
Sbjct: 178 FVDFVSPAHAATAMDALHG 196
>gi|223973687|gb|ACN31031.1| unknown [Zea mays]
Length = 221
Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 155/216 (71%), Gaps = 13/216 (6%)
Query: 24 KRPR-TDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQS 81
KRPR T++ DVP + + YY RD++R R RDT+SL ASY+R+LR+ QI S+ GG +
Sbjct: 12 KRPRPTEFSDVPGAPDTAGYYPRDEERAGYRAARDTESLNASYERFLRTGQIQSFGGGHA 71
Query: 82 A---RHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVE 138
R GG + PVDD ++ GMD R +G GG E PLPPDAS+TL++E
Sbjct: 72 GEPIRPAVGGNAAYPVDDRSMMAARGMD------SRNIGFVGGMPEPPLPPDASNTLYIE 125
Query: 139 GLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQ 198
G+PSDC+RREV+HIFRPFVG++EVRLV+KE +HPGGDP++LCFVDF P +A A+DALQ
Sbjct: 126 GVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFAEPTQSAIALDALQ 185
Query: 199 GYRFDEHDRDSVKLRLQFARY--PGARSGGGHRGKR 232
GY+FDEHDR+S LRLQFAR+ P SG G RG+R
Sbjct: 186 GYKFDEHDRNSPNLRLQFARFAGPKGNSGPGGRGRR 221
>gi|413953430|gb|AFW86079.1| hypothetical protein ZEAMMB73_802063 [Zea mays]
Length = 262
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/216 (56%), Positives = 155/216 (71%), Gaps = 13/216 (6%)
Query: 24 KRPR-TDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQS 81
KRPR T++ DVP + + YY RD++R R RDT+SL ASY+R+LR+ QI S+ GG +
Sbjct: 53 KRPRPTEFSDVPGAPDTAGYYPRDEERAGYRAARDTESLNASYERFLRTGQIQSFGGGHA 112
Query: 82 A---RHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVE 138
R GG + PVDD ++ GMD R +G GG E PLPPDAS+TL++E
Sbjct: 113 GEPIRPAVGGNAAYPVDDRSMMAARGMD------SRNIGFVGGMPEPPLPPDASNTLYIE 166
Query: 139 GLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQ 198
G+PSDC+RREV+HIFRPFVG++EVRLV+KE +HPGGDP++LCFVDF P +A A+DALQ
Sbjct: 167 GVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFAEPTQSAIALDALQ 226
Query: 199 GYRFDEHDRDSVKLRLQFARY--PGARSGGGHRGKR 232
GY+FDEHDR+S LRLQFAR+ P SG G RG+R
Sbjct: 227 GYKFDEHDRNSPNLRLQFARFAGPKGNSGPGGRGRR 262
>gi|388513795|gb|AFK44959.1| unknown [Lotus japonicus]
Length = 239
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 127/232 (54%), Positives = 161/232 (69%), Gaps = 23/232 (9%)
Query: 24 KRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSG 78
KRPR+DYD+P SG+++++Y RDDDR R +RDT ++G++YDRYL+S Q+S+Y+
Sbjct: 8 KRPRSDYDMPASGLSSGNDINNYIVRDDDRTGPRMLRDTKTIGSTYDRYLQSGQLSAYTS 67
Query: 79 GQSAR-------HMSGGMPSRPVDDPRIVG-IGGMDPGPSAKDRALGLGG---------- 120
G+++ GG+P + D +G GG P + R GG
Sbjct: 68 GEASTIGGLGYARGPGGLPGHSLADHAAMGRHGGGGPDIAPNGRGFNYGGQPPVDSVSRP 127
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
G VPLPPDASSTL+VEGLPSD ++REVAHIFRPFVGY+EVRLV+KES+H GGDPLILC
Sbjct: 128 GHETVPLPPDASSTLYVEGLPSDSTKREVAHIFRPFVGYREVRLVTKESKHRGGDPLILC 187
Query: 181 FVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
FVDF +PA AATA+ ALQGY+ DE D +S LRLQF+RYPG RSG G RGKR
Sbjct: 188 FVDFENPACAATALSALQGYKVDELDPESGHLRLQFSRYPGPRSGPGFRGKR 239
>gi|222634881|gb|EEE65013.1| hypothetical protein OsJ_19964 [Oryza sativa Japonica Group]
Length = 265
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/205 (57%), Positives = 152/205 (74%), Gaps = 15/205 (7%)
Query: 24 KRPR-TDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGG-- 79
KRPR D+ DVP E++ YY+RD++R R RDT++L ASY+R+LR+ QI SY G
Sbjct: 51 KRPRPADFSDVPGAPEMAGYYSRDEERPGYRPARDTEALNASYERFLRTGQIQSYGAGAG 110
Query: 80 -----QSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASST 134
+S R +GG PV+D ++ GGM+ R +G GGG E PLPPDAS+T
Sbjct: 111 AGPGAESIRPAAGGNAGYPVEDRPMMAGGGME------ARNIGFGGGMPEPPLPPDASNT 164
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+EG+P+DC+RREV+HIFRPFVG++EVRLVSKE+RHPGGDP++LCFVDF + + AA AM
Sbjct: 165 LFIEGIPTDCARREVSHIFRPFVGFREVRLVSKEARHPGGDPILLCFVDFETASQAAIAM 224
Query: 195 DALQGYRFDEHDRDSVKLRLQFARY 219
DALQGY+FDEHDR+S LRLQFAR+
Sbjct: 225 DALQGYKFDEHDRNSPHLRLQFARF 249
>gi|356576041|ref|XP_003556143.1| PREDICTED: uncharacterized protein LOC100812551 isoform 1 [Glycine
max]
Length = 252
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 133/256 (51%), Positives = 171/256 (66%), Gaps = 28/256 (10%)
Query: 1 MADGYWRYSDARQPQSALPS-LVSKRPRTDYDV-PSG-----HELSSYYTRDDDRGALRG 53
M DG W RQ Q LPS + KRPRT+YD+ PSG +E+ +Y R+DD R
Sbjct: 1 MTDGSWN----RQQQPFLPSSAMLKRPRTEYDISPSGLTSGGNEMHNYIGRNDDHTGHRI 56
Query: 54 MRDTDSLGASYDRYLRSAQISSYSGGQSARHMS-------GGMPSRPVDDPRIVGIGGMD 106
++DT +LG+++DRYL+SA ++S++ G+++ S GG+P + DP ++G G
Sbjct: 57 LKDTKTLGSAFDRYLQSAGLTSFNSGEASAIGSVGLERGVGGLPRHSLTDPAVMGHPGGG 116
Query: 107 PGPSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
+ R + G G VPLPPDASSTL+VEGLPSD +RREVAHIFRPF
Sbjct: 117 HDLARGGRNVNYGDQLPVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPF 176
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQF 216
VGY+EVRLVSKES+H GGDPLILCFVDF +PA AATA+ ALQGY+ DE + +S LRLQF
Sbjct: 177 VGYREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQF 236
Query: 217 ARYPGARSGGGHRGKR 232
+R+PG RSG G RGKR
Sbjct: 237 SRFPGPRSGPGPRGKR 252
>gi|449462154|ref|XP_004148806.1| PREDICTED: uncharacterized protein LOC101222348 isoform 1 [Cucumis
sativus]
gi|449462156|ref|XP_004148807.1| PREDICTED: uncharacterized protein LOC101222348 isoform 2 [Cucumis
sativus]
Length = 257
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 138/265 (52%), Positives = 172/265 (64%), Gaps = 41/265 (15%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMR 55
MAD YW + +QP P+++ KRPRTDY++P +GH++ +Y T DDRG R ++
Sbjct: 1 MADDYW---NRQQPLLPSPAML-KRPRTDYELPASGLSTGHDMHNYLT-SDDRGGPRSVK 55
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKD-- 113
DT ++G++YDRYL+S Q+SS++ G+ H GM RPV + + +G PGP D
Sbjct: 56 DTQTIGSAYDRYLQSVQLSSFTSGEVPTHGEMGM-GRPVAN--RMPVGNRMPGPLLPDPI 112
Query: 114 ----------------RALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRR 147
R L G GR VPLPPDAS+TL+VEGLP D SRR
Sbjct: 113 VMSRPPAVSPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRR 172
Query: 148 EVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDR 207
EVAHIFRPFVGYKE+RLVSKES+H GGDPLILCFVDF +PA AATAM ALQGY+ DE D
Sbjct: 173 EVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKMDEQDP 232
Query: 208 DSVKLRLQFARYPGARSGGGHRGKR 232
+S LRLQF+R+PG RSG G GKR
Sbjct: 233 ESNYLRLQFSRHPGPRSGSGSGGKR 257
>gi|255637493|gb|ACU19073.1| unknown [Glycine max]
Length = 251
Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 128/255 (50%), Positives = 168/255 (65%), Gaps = 27/255 (10%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDV-PSG-----HELSSYYTRDDDRGALRGM 54
M DG+W P S + KRPRT+YD+ PSG +E+ +Y R+DD R +
Sbjct: 1 MTDGFWNRQQPLHPSSTM----LKRPRTEYDMSPSGLTSGGNEMHNYIARNDDHTGHRML 56
Query: 55 RDTDSLGASYDRYLRSAQISSYSGGQSARHMSGGM-------PSRPVDDPRIVGIGGMDP 107
+DT ++G++YDRYL+SA+++S++ G+++ G+ P + DP ++G G
Sbjct: 57 KDTKTIGSAYDRYLQSARLTSFNSGEASAVGGVGLGRGAGGLPHHSLTDPAVMGHPGGGH 116
Query: 108 GPSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFV 157
+ R + GG G VPLPPDASSTL+VEGLPSD +RREVAHIFRPFV
Sbjct: 117 DHARNGRNVNYGGQLPLDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFV 176
Query: 158 GYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFA 217
GY+EVRLVSKES+H GGDPLILCFVDF +PA AATA+ ALQGY+ DE + +S LRLQF+
Sbjct: 177 GYREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFS 236
Query: 218 RYPGARSGGGHRGKR 232
R+PG RSG G RGKR
Sbjct: 237 RFPGPRSGPGPRGKR 251
>gi|356535806|ref|XP_003536434.1| PREDICTED: uncharacterized protein LOC100815695 [Glycine max]
Length = 251
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/255 (50%), Positives = 167/255 (65%), Gaps = 27/255 (10%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDV-PSG-----HELSSYYTRDDDRGALRGM 54
M DG+W P S + KRPRT+YD+ PSG +E+ +Y R+DD R +
Sbjct: 1 MTDGFWNRQQPLHPSSTM----LKRPRTEYDMSPSGLTSGGNEMHNYIARNDDHTGHRML 56
Query: 55 RDTDSLGASYDRYLRSAQISSYSGGQSARHMSGGM-------PSRPVDDPRIVGIGGMDP 107
+DT ++G++YDRYL+SA ++S++ G+++ G+ P + DP ++G G
Sbjct: 57 KDTKTIGSAYDRYLQSAGLTSFNSGEASAVGGVGLGRGAGGLPHHSLTDPAVMGHPGGGH 116
Query: 108 GPSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFV 157
+ R + GG G VPLPPDASSTL+VEGLPSD +RREVAHIFRPFV
Sbjct: 117 DHARNGRNVNYGGQLPLDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFV 176
Query: 158 GYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFA 217
GY+EVRLVSKES+H GGDPLILCFVDF +PA AATA+ ALQGY+ DE + +S LRLQF+
Sbjct: 177 GYREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFS 236
Query: 218 RYPGARSGGGHRGKR 232
R+PG RSG G RGKR
Sbjct: 237 RFPGPRSGPGPRGKR 251
>gi|242091796|ref|XP_002436388.1| hypothetical protein SORBIDRAFT_10g001660 [Sorghum bicolor]
gi|241914611|gb|EER87755.1| hypothetical protein SORBIDRAFT_10g001660 [Sorghum bicolor]
Length = 266
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/201 (55%), Positives = 146/201 (72%), Gaps = 11/201 (5%)
Query: 24 KRPR-TDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGG-- 79
KRPR D+ DVP +++ YY RD++R R RDT++L ASY+R+LR+ QI S+ GG
Sbjct: 56 KRPRPADFSDVPGAPDMTGYYPRDEERAGYRPARDTEALNASYERFLRTGQIQSFGGGPA 115
Query: 80 -QSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVE 138
+ R GG PVDD ++ GMD R +G GGG E PLPPDAS+TL++E
Sbjct: 116 GEPIRPAVGGNAGYPVDDRSMMAARGMD------SRNIGFGGGMPEPPLPPDASNTLYIE 169
Query: 139 GLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQ 198
G+P+ C+RREV+HIFRPFVG++EVRLV+KE +HPGGDP++LCFVDF P +A AM+ALQ
Sbjct: 170 GIPTGCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFAEPTQSAIAMEALQ 229
Query: 199 GYRFDEHDRDSVKLRLQFARY 219
GY+FDEHDR+S LRLQFAR+
Sbjct: 230 GYKFDEHDRNSPNLRLQFARF 250
>gi|218201560|gb|EEC83987.1| hypothetical protein OsI_30140 [Oryza sativa Indica Group]
Length = 218
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 159/216 (73%), Gaps = 16/216 (7%)
Query: 24 KRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSA 82
KR R DY DVP+G +++ YY R+ DR +R+ +++GASYDRYLR+ + S + ++
Sbjct: 12 KRARPDYGDVPAGQDMTGYYPRETDRTGYHALRENEAIGASYDRYLRNG-MPSVAATETN 70
Query: 83 RHMSGGMPSR------PVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLF 136
R + GGM PVDD R++G+G MD R +G G R E PLP DASSTL+
Sbjct: 71 RPVVGGMGGMGGMGGYPVDDRRMIGVG-MD------SRGMGYGA-RPEPPLPADASSTLY 122
Query: 137 VEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDA 196
VEGLP++C+RREV+HIFRPFVG++EVRLV+KESRHPGGDP +LCFVDF +PA A A++A
Sbjct: 123 VEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATLALEA 182
Query: 197 LQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
LQGY+FDEHDRDS LRLQF+R+PG RS GG RG+R
Sbjct: 183 LQGYKFDEHDRDSAHLRLQFSRFPGPRSAGGPRGRR 218
>gi|222640974|gb|EEE69106.1| hypothetical protein OsJ_28175 [Oryza sativa Japonica Group]
Length = 268
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 159/216 (73%), Gaps = 16/216 (7%)
Query: 24 KRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSA 82
KR R DY DVP+G +++ YY R+ DR +R+ +++GASYDRYLR+ + S + ++
Sbjct: 62 KRARPDYGDVPAGQDMTGYYPRETDRTGYHALRENEAIGASYDRYLRNG-MPSVAATETN 120
Query: 83 RHMSGGMPSR------PVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLF 136
R + GGM PVDD R++G+G MD R +G G R E PLP DASSTL+
Sbjct: 121 RPVVGGMGGMGGMGGYPVDDRRMIGVG-MD------SRGMGYGA-RPEPPLPADASSTLY 172
Query: 137 VEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDA 196
VEGLP++C+RREV+HIFRPFVG++EVRLV+KESRHPGGDP +LCFVDF +PA A A++A
Sbjct: 173 VEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATLALEA 232
Query: 197 LQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
LQGY+FDEHDRDS LRLQF+R+PG RS GG RG+R
Sbjct: 233 LQGYKFDEHDRDSAHLRLQFSRFPGPRSAGGPRGRR 268
>gi|356576043|ref|XP_003556144.1| PREDICTED: uncharacterized protein LOC100812551 isoform 2 [Glycine
max]
Length = 244
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/251 (52%), Positives = 168/251 (66%), Gaps = 26/251 (10%)
Query: 1 MADGYWRYSDARQPQSALPS-LVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
M DG W RQ Q LPS + KRPRT+Y G+E+ +Y R+DD R ++DT +
Sbjct: 1 MTDGSWN----RQQQPFLPSSAMLKRPRTEY---GGNEMHNYIGRNDDHTGHRILKDTKT 53
Query: 60 LGASYDRYLRSA-QISSYSGGQSARHMS-------GGMPSRPVDDPRIVGIGGMDPGPSA 111
LG+++DRYL+SA Q++S++ G+++ S GG+P + DP ++G G +
Sbjct: 54 LGSAFDRYLQSAGQLTSFNSGEASAIGSVGLERGVGGLPRHSLTDPAVMGHPGGGHDLAR 113
Query: 112 KDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKE 161
R + G G VPLPPDASSTL+VEGLPSD +RREVAHIFRPFVGY+E
Sbjct: 114 GGRNVNYGDQLPVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYRE 173
Query: 162 VRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPG 221
VRLVSKES+H GGDPLILCFVDF +PA AATA+ ALQGY+ DE + +S LRLQF+R+PG
Sbjct: 174 VRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFSRFPG 233
Query: 222 ARSGGGHRGKR 232
RSG G RGKR
Sbjct: 234 PRSGPGPRGKR 244
>gi|449506960|ref|XP_004162895.1| PREDICTED: uncharacterized LOC101222348 isoform 1 [Cucumis sativus]
gi|449506964|ref|XP_004162896.1| PREDICTED: uncharacterized LOC101222348 isoform 2 [Cucumis sativus]
Length = 257
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/265 (51%), Positives = 170/265 (64%), Gaps = 41/265 (15%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMR 55
MAD YW + +QP P+++ KRPRTDY++P +GH++ +Y T DDRG R ++
Sbjct: 1 MADDYW---NRQQPLLPSPAML-KRPRTDYELPASGLSTGHDMHNYLT-SDDRGGPRSVK 55
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKD-- 113
DT ++G++YDRYL+S Q+SS++ G+ H GM RPV + + + PGP D
Sbjct: 56 DTQTIGSAYDRYLQSVQLSSFTSGEVPTHGEMGM-GRPVAN--RMPVRNRMPGPLLPDPI 112
Query: 114 ----------------RALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRR 147
R L G GR VPLPPDAS+TL+VEGLP D SRR
Sbjct: 113 VMSRPPAVSPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRR 172
Query: 148 EVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDR 207
EVAHIFRPFVGYKE+R VSKES+H GGDPLILCFVDF +PA AATAM ALQGY+ DE D
Sbjct: 173 EVAHIFRPFVGYKELRFVSKESKHRGGDPLILCFVDFANPACAATAMSALQGYKIDEQDP 232
Query: 208 DSVKLRLQFARYPGARSGGGHRGKR 232
+S LRLQF+R+PG RSG G GKR
Sbjct: 233 ESNYLRLQFSRHPGPRSGSGSGGKR 257
>gi|356576045|ref|XP_003556145.1| PREDICTED: uncharacterized protein LOC100813445 isoform 1 [Glycine
max]
Length = 252
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/254 (51%), Positives = 169/254 (66%), Gaps = 24/254 (9%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDV-PSG----HELSSYYTRDDDRGALRGMR 55
M DG+W + Q + L KRPRT+YD+ PSG +E+ +Y R+DD R ++
Sbjct: 1 MTDGFWNRQQQQPLQPSSAML--KRPRTEYDMSPSGLTGGNEMHNYIARNDDHTGHRMLK 58
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSA-------RHMSGGMPSRPVDDPRIVGIGGMDPG 108
DT +LG++YDRYL+SA ++S++ G+++ GG+P + DP ++G G
Sbjct: 59 DTKTLGSAYDRYLQSAGLTSFNSGEASAIGGVGLGRGVGGLPRHSLTDPAVMGHPGGGHD 118
Query: 109 PSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVG 158
+ R + GG G VPLPPDASSTL+VEGLPSD +RREVAHIFRPFVG
Sbjct: 119 LARNGRNVNYGGQLTVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVG 178
Query: 159 YKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
Y+EVRLVSKES+H GGDPLILCFVDF +PA AATA+ ALQGY+ DE + +S LRLQF+R
Sbjct: 179 YREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFSR 238
Query: 219 YPGARSGGGHRGKR 232
+PG RSG G RGKR
Sbjct: 239 FPGPRSGPGPRGKR 252
>gi|326499832|dbj|BAJ90751.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501246|dbj|BAJ98854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/225 (55%), Positives = 160/225 (71%), Gaps = 23/225 (10%)
Query: 19 PSLVSKRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYS 77
PSL KR R DY D P G E++ YY R++ +RD +++GASYDRYLR+ + S +
Sbjct: 71 PSL--KRARPDYGDGPGGQEMAGYYPREN--AGYHSLRDNEAIGASYDRYLRNG-MPSVA 125
Query: 78 GGQSARHMSGGMPSR----------PVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPL 127
+ +R + G M PVDD R++G+ GMD RA+G G R E PL
Sbjct: 126 ANEPSRAVVGAMGGAAMVGGGMSGYPVDDRRMMGVVGMD------SRAMGYGA-RPEPPL 178
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PPDAS+TL++EGLP++C+RREV+HIFRPFVG++EVRLV+KESRHPGGDP +LCFVDF SP
Sbjct: 179 PPDASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDSP 238
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
A A A++ALQGY+FDEHDR+S LRLQF+R+PG RS GG RG+R
Sbjct: 239 AQATIALEALQGYKFDEHDRESAHLRLQFSRFPGPRSAGGPRGRR 283
>gi|224066731|ref|XP_002302187.1| predicted protein [Populus trichocarpa]
gi|222843913|gb|EEE81460.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/255 (50%), Positives = 169/255 (66%), Gaps = 28/255 (10%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRD--DDRGALRGMRDTD 58
M DGYW + +QP + S + KRPR+DYD+PS +E+ +YY RD DDR ++D+
Sbjct: 1 MTDGYW---NRQQPSNVPSSGMLKRPRSDYDMPSSYEMQNYYPRDVDDDRTRYETVKDSK 57
Query: 59 SLGASYDRYLRSAQISSYSGGQSA--------RHMSGGMPSRPVDDPRIVG---IGGMDP 107
S+G++YDRYL++AQ +++ +++ R + GGM P+ D ++ G+D
Sbjct: 58 SIGSAYDRYLQNAQAPTFASREASALGGAGFGRGIGGGMSGLPIADSAVMTRPRSAGLDL 117
Query: 108 GPSAKDRALGLGGGRSE----------VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFV 157
+ +D +G R E LPPDAS+TL+VEG P DCSRREVAHIFRPFV
Sbjct: 118 ASNGRD--VGFVRQRPEDRIARSDREMAHLPPDASNTLYVEGFPPDCSRREVAHIFRPFV 175
Query: 158 GYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFA 217
GYKEVRLVSKE+R GGDP+ILCFVDFV+P AATAM ALQGY+ DEHD DS LRLQF+
Sbjct: 176 GYKEVRLVSKEARQRGGDPIILCFVDFVNPECAATAMSALQGYKVDEHDPDSRYLRLQFS 235
Query: 218 RYPGARSGGGHRGKR 232
R+PG RSG RG+R
Sbjct: 236 RHPGPRSGPISRGRR 250
>gi|255645608|gb|ACU23298.1| unknown [Glycine max]
Length = 242
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 162/250 (64%), Gaps = 26/250 (10%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M DGYW QS + KRPR+DY G+E+ + + RDDDR R ++DT ++
Sbjct: 1 MTDGYWNRQQTLLSQSGM----LKRPRSDY----GNEMHNNFARDDDRTGHRMLKDTKTI 52
Query: 61 GASYDRYLRSAQISSYSGGQSAR-------HMSGGMPSRPVDDPRIVG-IGGMDPGPSAK 112
G++YDRYL+S Q+SS++ G+++ GG+ + DP ++G GG P +
Sbjct: 53 GSAYDRYLQSGQLSSFTSGEASTVGGLGLARGGGGLSDHSLADPSVMGRHGGGGPDLAPN 112
Query: 113 DRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEV 162
R + GG G V LPPDASSTL+VEGLPSD +RREVAHIFRPFVGY+EV
Sbjct: 113 GRGVNYGGQLPVDAVSRPGPETVSLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYREV 172
Query: 163 RLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGA 222
RLVSKES+H GGDP LCFVDF +PA AATAM ALQGY+ DE + +S LRLQF+RYPG
Sbjct: 173 RLVSKESKHRGGDPHYLCFVDFANPACAATAMSALQGYKVDELNPESSHLRLQFSRYPGP 232
Query: 223 RSGGGHRGKR 232
RSG RGKR
Sbjct: 233 RSGPAFRGKR 242
>gi|356535808|ref|XP_003536435.1| PREDICTED: uncharacterized protein LOC100816230 isoform 1 [Glycine
max]
Length = 251
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/255 (50%), Positives = 165/255 (64%), Gaps = 27/255 (10%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDV-PSG-----HELSSYYTRDDDRGALRGM 54
M DG W RQ PS + KRPRT+YD+ PSG +E+ +Y R+DD R +
Sbjct: 1 MTDGSWN----RQQSFLPPSAMLKRPRTEYDMSPSGLTSGGNEMHNYIARNDDHTGHRIL 56
Query: 55 RDTDSLGASYDRYLRSAQISSYSGGQSARHMSGGM-------PSRPVDDPRIVGIGGMDP 107
+DT +LG++YDRYL+SA ++S++ G+++ S G+ P + DP + G G
Sbjct: 57 KDTKTLGSAYDRYLQSAGLTSFNSGEASAISSVGLGRGVGGLPHHSLTDPAVTGHPGGGH 116
Query: 108 GPSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFV 157
S R + G +PLPPDASSTL+VEGLPS +RREVAHIFRPFV
Sbjct: 117 DLSRNGRNVNYASQLPVDAASMPGPETLPLPPDASSTLYVEGLPSGSTRREVAHIFRPFV 176
Query: 158 GYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFA 217
GY+EVRLVSKES+H GGDPLILCFVDF +PA AATA+ ALQGY+ DE + +S LRLQF+
Sbjct: 177 GYREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFS 236
Query: 218 RYPGARSGGGHRGKR 232
R+PG RSG G RGKR
Sbjct: 237 RFPGPRSGPGLRGKR 251
>gi|356576047|ref|XP_003556146.1| PREDICTED: uncharacterized protein LOC100813445 isoform 2 [Glycine
max]
Length = 245
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 166/250 (66%), Gaps = 23/250 (9%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M DG+W + Q + L KRPRT+Y G+E+ +Y R+DD R ++DT +L
Sbjct: 1 MTDGFWNRQQQQPLQPSSAML--KRPRTEY---GGNEMHNYIARNDDHTGHRMLKDTKTL 55
Query: 61 GASYDRYLRSA-QISSYSGGQSA-------RHMSGGMPSRPVDDPRIVGIGGMDPGPSAK 112
G++YDRYL+SA Q++S++ G+++ GG+P + DP ++G G +
Sbjct: 56 GSAYDRYLQSAGQLTSFNSGEASAIGGVGLGRGVGGLPRHSLTDPAVMGHPGGGHDLARN 115
Query: 113 DRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEV 162
R + GG G VPLPPDASSTL+VEGLPSD +RREVAHIFRPFVGY+EV
Sbjct: 116 GRNVNYGGQLTVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYREV 175
Query: 163 RLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGA 222
RLVSKES+H GGDPLILCFVDF +PA AATA+ ALQGY+ DE + +S LRLQF+R+PG
Sbjct: 176 RLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFSRFPGP 235
Query: 223 RSGGGHRGKR 232
RSG G RGKR
Sbjct: 236 RSGPGPRGKR 245
>gi|293331463|ref|NP_001168957.1| uncharacterized protein LOC100382777 [Zea mays]
gi|223974013|gb|ACN31194.1| unknown [Zea mays]
Length = 287
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/227 (53%), Positives = 154/227 (67%), Gaps = 25/227 (11%)
Query: 24 KRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQS- 81
KR R D+ DV G +++ YY R+ DR +R+ D+LGASYDRYLR+ S + S
Sbjct: 68 KRARPDFGDVSGGQDMTGYYPRETDRSGYHSLRENDTLGASYDRYLRNGMASVGANDTSR 127
Query: 82 ----------------ARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEV 125
M+ GM VD R++G+ GMD R +G GG R E
Sbjct: 128 AAGMGAGLAAGMTAGMGAGMAAGMAGYGVDGQRMMGVVGMD------SRGMGYGG-RPEP 180
Query: 126 PLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFV 185
PLPPDASSTL++EGLP++C+RREV+HIFRPFVG++EVRLV+KESRHPGGDP +LCFVDF
Sbjct: 181 PLPPDASSTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFD 240
Query: 186 SPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
+PA A A++ALQGY+FDEH+RDS LRLQF+R+PG RS GG RG+R
Sbjct: 241 NPAQATIALEALQGYKFDEHERDSAHLRLQFSRFPGPRSAGGPRGRR 287
>gi|356535810|ref|XP_003536436.1| PREDICTED: uncharacterized protein LOC100816230 isoform 2 [Glycine
max]
Length = 243
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/250 (50%), Positives = 162/250 (64%), Gaps = 25/250 (10%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M DG W RQ PS + KRPRT+Y G+E+ +Y R+DD R ++DT +L
Sbjct: 1 MTDGSWN----RQQSFLPPSAMLKRPRTEY---GGNEMHNYIARNDDHTGHRILKDTKTL 53
Query: 61 GASYDRYLRSA-QISSYSGGQSARHMSGGM-------PSRPVDDPRIVGIGGMDPGPSAK 112
G++YDRYL+SA Q++S++ G+++ S G+ P + DP + G G S
Sbjct: 54 GSAYDRYLQSAGQLTSFNSGEASAISSVGLGRGVGGLPHHSLTDPAVTGHPGGGHDLSRN 113
Query: 113 DRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEV 162
R + G +PLPPDASSTL+VEGLPS +RREVAHIFRPFVGY+EV
Sbjct: 114 GRNVNYASQLPVDAASMPGPETLPLPPDASSTLYVEGLPSGSTRREVAHIFRPFVGYREV 173
Query: 163 RLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGA 222
RLVSKES+H GGDPLILCFVDF +PA AATA+ ALQGY+ DE + +S LRLQF+R+PG
Sbjct: 174 RLVSKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDELNPESSHLRLQFSRFPGP 233
Query: 223 RSGGGHRGKR 232
RSG G RGKR
Sbjct: 234 RSGPGLRGKR 243
>gi|357148760|ref|XP_003574884.1| PREDICTED: uncharacterized protein LOC100836479 [Brachypodium
distachyon]
Length = 296
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/230 (52%), Positives = 158/230 (68%), Gaps = 28/230 (12%)
Query: 19 PSLVSKRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYS 77
PSL KR R DY D P G +++ YY R++ +RD + LGASYDRYLR+ + + +
Sbjct: 79 PSL--KRARPDYVDGPGGQDMAGYYPREN--AGYHSLRDNEVLGASYDRYLRNG-VPAVA 133
Query: 78 GGQSARHMSGGMPSR---------------PVDDPRIVGIGGMDPGPSAKDRALGLGGGR 122
+ +R + GGM P D+ R++G+ GMD R +G G R
Sbjct: 134 VNEPSRAVVGGMGGAGMGGAGMVGAGMSGYPGDERRMMGVVGMD------SRGMGYGA-R 186
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
E PLPPDAS+TL++EGLP++C+RREV+HIFRPFVG++EVRLV+KESRHPGGDP +LCFV
Sbjct: 187 PEPPLPPDASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFV 246
Query: 183 DFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
DF SPA A A++ALQGY+FDEHDR+S LRLQF+R+PG RS GG RG+R
Sbjct: 247 DFDSPAQATIALEALQGYKFDEHDRESAHLRLQFSRFPGPRSAGGPRGRR 296
>gi|255584574|ref|XP_002533013.1| conserved hypothetical protein [Ricinus communis]
gi|223527202|gb|EEF29367.1| conserved hypothetical protein [Ricinus communis]
Length = 1031
Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 128/258 (49%), Positives = 159/258 (61%), Gaps = 28/258 (10%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDV-----PSGHELSSYYTRDDDRGALRGMR 55
M DGYW + +Q KR R +YD+ PS HE+ +YY RDDDR + ++
Sbjct: 776 MTDGYWNHRHQQQHPLLQSGESLKRHRPEYDIASSGLPSSHEIHNYYPRDDDRERYQAVK 835
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSA-------RHMSGGMPSRPVDDP---RIVGIGGM 105
D+ ++G++YDRYL++AQI+ S G+++ R GGM P+ D R G
Sbjct: 836 DSKTIGSAYDRYLQNAQIAPLSSGEASGLSVGFGRASGGGMTGLPILDSGMARRARPSGQ 895
Query: 106 DPGPSAKDRALGLGGG----------RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRP 155
D + +D +G R VPLP DASSTL+VEGLP RREVAHIFRP
Sbjct: 896 DLASNGRD--IGFVSQPPANKIARPVRETVPLPQDASSTLYVEGLPPGSKRREVAHIFRP 953
Query: 156 FVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQ 215
FVGYKEVRLVSKES++ DP+ILCFVDF A AATAM ALQGY+ DEHD +S LRLQ
Sbjct: 954 FVGYKEVRLVSKESKNRTRDPIILCFVDFDDAACAATAMSALQGYKMDEHDCESSCLRLQ 1013
Query: 216 FARYPGARSGG-GHRGKR 232
F+RYPG RSGG G RGKR
Sbjct: 1014 FSRYPGPRSGGSGSRGKR 1031
>gi|358345383|ref|XP_003636759.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|23304837|emb|CAD48198.1| RNA-binding protein [Medicago truncatula]
gi|355502694|gb|AES83897.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 261
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/253 (48%), Positives = 164/253 (64%), Gaps = 31/253 (12%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYD-----VPSGHELSSYYTRDDDRGALRGMR 55
MADGYW + P S L KRPR DY+ +PSG+E+ Y +R++DR ++
Sbjct: 1 MADGYWNRQQSLLPHSGL----HKRPRPDYEMPASGLPSGNEMH-YLSREEDRSGHPMVK 55
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSA-------RHMSGGMPSRPVDDPRIV----GIGG 104
D+ ++G++YDRYL+ Q+ S++ G+++ + GG+P+ + DP + G GG
Sbjct: 56 DSKTIGSAYDRYLQ-GQVPSFTSGEASTVGALGLQRGIGGLPNHSLSDPSAMIGRHGGGG 114
Query: 105 MDPGPSAKDRALGLG--------GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
D P+ + G G LPPDAS TL++EGLPSDC+RREVAHIFRPF
Sbjct: 115 PDLAPNGRGMNYGFQPPMDPVSRHGPEPALLPPDASPTLYIEGLPSDCTRREVAHIFRPF 174
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQF 216
VGY+EVRLVSKE++H GDPLILCFVDF +PA AATA+ ALQGY+ DE + +S LRLQF
Sbjct: 175 VGYREVRLVSKEAKH-RGDPLILCFVDFANPACAATALSALQGYKVDEINPESSHLRLQF 233
Query: 217 ARYPGARSGGGHR 229
+RYPG RSGGG R
Sbjct: 234 SRYPGPRSGGGPR 246
>gi|115466130|ref|NP_001056664.1| Os06g0127500 [Oryza sativa Japonica Group]
gi|25553563|dbj|BAC24834.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|55295879|dbj|BAD67747.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113594704|dbj|BAF18578.1| Os06g0127500 [Oryza sativa Japonica Group]
Length = 293
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 151/233 (64%), Gaps = 43/233 (18%)
Query: 24 KRPR-TDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGG-- 79
KRPR D+ DVP E++ YY+RD++R R RDT++L ASY+R+LR+ QI SY G
Sbjct: 51 KRPRPADFSDVPGAPEMAGYYSRDEERPGYRPARDTEALNASYERFLRTGQIQSYGAGAG 110
Query: 80 -----QSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASST 134
+S R +GG PV+D ++ GGM+ R +G GGG E PLPPDAS+T
Sbjct: 111 AGPGAESIRPAAGGNAGYPVEDRPMMAGGGME------ARNIGFGGGMPEPPLPPDASNT 164
Query: 135 LFVEGLPSDCSRREVAH----------------------------IFRPFVGYKEVRLVS 166
LF+EG+P+DC+RREV+ IFRPFVG++EVRLVS
Sbjct: 165 LFIEGIPTDCARREVSRILKSHAFFCLSLIFHLHKFCWSFTFPQDIFRPFVGFREVRLVS 224
Query: 167 KESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARY 219
KE+RHPGGDP++LCFVDF + + AA AMDALQGY+FDEHDR+S LRLQFAR+
Sbjct: 225 KEARHPGGDPILLCFVDFETASQAAIAMDALQGYKFDEHDRNSPHLRLQFARF 277
>gi|357443729|ref|XP_003592142.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355481190|gb|AES62393.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 252
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 167/259 (64%), Gaps = 34/259 (13%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYD-----VPSGHELSSYYTRDDDRGALRGMR 55
MADG+W P P + KRPRT+YD V SG+E+ +Y +++ L
Sbjct: 1 MADGFWNRQQQHLPP---PGGMLKRPRTEYDTAPSGVTSGNEVHNYIAQNNGHQMLN--- 54
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQS--------ARHMSGGMPSRPVDDPRIVG-IGGMD 106
DT LG++YDR+L+SA ++S++ G++ AR + G +P + DP +G + G+
Sbjct: 55 DTKILGSAYDRFLQSAGLTSFNSGEASVIGGVGFARGV-GELPGHSLGDPSAMGHLSGVG 113
Query: 107 PGP--SAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFR 154
GP S R + GG G +PLP DASSTL+VEGLPSD ++REVAHIFR
Sbjct: 114 GGPDLSRNGRDVNFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHIFR 173
Query: 155 PFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
PFVGY+EVRLV+KES+H GGDPLILCFVDF +PA AATA+ ALQGY+ DE + +S LRL
Sbjct: 174 PFVGYREVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDEINPESSYLRL 233
Query: 215 QFARYPGARSGG-GHRGKR 232
QF+R PG RSGG G RGKR
Sbjct: 234 QFSRSPGRRSGGPGPRGKR 252
>gi|388500704|gb|AFK38418.1| unknown [Medicago truncatula]
Length = 252
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 166/259 (64%), Gaps = 34/259 (13%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYD-----VPSGHELSSYYTRDDDRGALRGMR 55
MADG+W P P + KRPRT+YD V SG+E+ +Y +++ L
Sbjct: 1 MADGFWNRQQQHLPP---PGGMLKRPRTEYDTAPSGVTSGNEVHNYIAQNNGHQMLN--- 54
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQS--------ARHMSGGMPSRPVDDPRIVG-IGGMD 106
DT LG++YDR+L+SA ++S++ G++ AR + G +P + DP +G + G+
Sbjct: 55 DTKILGSAYDRFLQSAGLTSFNSGEASVIGGVGFARGV-GELPGHSLGDPSAMGHLSGVG 113
Query: 107 PGP--SAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFR 154
GP S R GG G +PLP DASSTL+VEGLPSD ++REVAHIFR
Sbjct: 114 GGPDLSRNGRDANFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHIFR 173
Query: 155 PFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
PFVGY+EVRLV+KES+H GGDPLILCFVDF +PA AATA+ ALQGY+ DE + +S LRL
Sbjct: 174 PFVGYREVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDEINPESSYLRL 233
Query: 215 QFARYPGARSGG-GHRGKR 232
QF+R PG RSGG G RGKR
Sbjct: 234 QFSRSPGRRSGGPGPRGKR 252
>gi|296088114|emb|CBI35503.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 159/254 (62%), Gaps = 33/254 (12%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMR 55
MAD +W +RQ V KRPR+DYD+P SG+E+ +Y + DD G R ++
Sbjct: 32 MADRFW----SRQYFG-----VPKRPRSDYDLPYSGLPSGNEVHNYLVQGDDLGGPRSVK 82
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGG----------- 104
D+ ++G +YD+Y + I S++ G ++ G+ + + + I G
Sbjct: 83 DSKTVGLAYDQYFQ--DIPSFTSGAASDFRGVGLGTATGEAISGLSISGPAVMDHLEALD 140
Query: 105 MDPGPSAKDRALG------LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVG 158
D PS + R G + R PLPPDASSTL+VEGLP D +RREVAHIFRPFVG
Sbjct: 141 SDLPPSGQGRRFGHQLDAIIRPSRETAPLPPDASSTLYVEGLPPDSTRREVAHIFRPFVG 200
Query: 159 YKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
YKEVRLVSKES+H G DPL+LCFVDF SPA AATA+ ALQGY+ EHDRDS ++RLQF++
Sbjct: 201 YKEVRLVSKESKHRGRDPLVLCFVDFTSPACAATALSALQGYKISEHDRDSAQMRLQFSQ 260
Query: 219 YPGARSGGGHRGKR 232
YP RSG G RGKR
Sbjct: 261 YPDPRSGSGSRGKR 274
>gi|359493018|ref|XP_002264314.2| PREDICTED: uncharacterized protein LOC100242739 [Vitis vinifera]
Length = 261
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/254 (48%), Positives = 159/254 (62%), Gaps = 33/254 (12%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMR 55
MAD +W +RQ V KRPR+DYD+P SG+E+ +Y + DD G R ++
Sbjct: 1 MADRFW----SRQYFG-----VPKRPRSDYDLPYSGLPSGNEVHNYLVQGDDLGGPRSVK 51
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGG----------- 104
D+ ++G +YD+Y + I S++ G ++ G+ + + + I G
Sbjct: 52 DSKTVGLAYDQYFQ--DIPSFTSGAASDFRGVGLGTATGEAISGLSISGPAVMDHLEALD 109
Query: 105 MDPGPSAKDRALG------LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVG 158
D PS + R G + R PLPPDASSTL+VEGLP D +RREVAHIFRPFVG
Sbjct: 110 SDLPPSGQGRRFGHQLDAIIRPSRETAPLPPDASSTLYVEGLPPDSTRREVAHIFRPFVG 169
Query: 159 YKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
YKEVRLVSKES+H G DPL+LCFVDF SPA AATA+ ALQGY+ EHDRDS ++RLQF++
Sbjct: 170 YKEVRLVSKESKHRGRDPLVLCFVDFTSPACAATALSALQGYKISEHDRDSAQMRLQFSQ 229
Query: 219 YPGARSGGGHRGKR 232
YP RSG G RGKR
Sbjct: 230 YPDPRSGSGSRGKR 243
>gi|326533746|dbj|BAK05404.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 263
Score = 206 bits (524), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/250 (48%), Positives = 156/250 (62%), Gaps = 39/250 (15%)
Query: 1 MADGYWRYSD----------ARQPQSALPSLVS------------KRPRT---DYDVPSG 35
MAD YWRY+D R P + P ++ KRPR D P
Sbjct: 1 MADAYWRYADLQRQQQQQQQMRTPSAGAPQSLTAAAAAAAGQQPLKRPRPGDHSADGPGA 60
Query: 36 HELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQS------ARHMSGGM 89
E++ YY RD++R +RDT +L ASY+R+LR+ QI S+ G + A +S G
Sbjct: 61 PEMAGYYPRDEERPGYAAVRDTQALNASYERFLRTGQIQSHGAGPAGGSVRPAAGVSAG- 119
Query: 90 PSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREV 149
DD + GGM+ R +G GGG E PLPPDAS+TLF+EG+P+DC RREV
Sbjct: 120 -GYQADDRPGMAAGGMN------GRNVGFGGGMPEPPLPPDASNTLFIEGIPTDCERREV 172
Query: 150 AHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDS 209
+HIFRPFVG++EVRLV+KE RHPGGDP++LCFVDF + A AA AM+ALQGY+FDEHDR S
Sbjct: 173 SHIFRPFVGFQEVRLVNKEPRHPGGDPIVLCFVDFANAAQAAIAMEALQGYKFDEHDRSS 232
Query: 210 VKLRLQFARY 219
+LRLQFAR+
Sbjct: 233 PQLRLQFARF 242
>gi|297842455|ref|XP_002889109.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334950|gb|EFH65368.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/252 (50%), Positives = 164/252 (65%), Gaps = 32/252 (12%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMR 55
MADGYW + ++ Q LPS KRPR+D++ P +GH YY RD+D +
Sbjct: 1 MADGYW---NQQRQQHHLPSGPPKRPRSDFEAPPSTMATGHG-GGYYPRDEDLD----VP 52
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQ------SARHMSGGMPSRPVDD--PRIVGIGGMDP 107
DT ++G++YDRYL+S Q SS G+ GG + VDD R G+ +D
Sbjct: 53 DTRTIGSAYDRYLQSVQTSSLQSGEGGSVSMGRPGGGGGGNGQTVDDFMMRRGGVLPLDY 112
Query: 108 GPSAKDRALGLGG-------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
GP+ + A+G R +PLPPDAS+TL+VEGLPS+CSRREVAHIFRPFVGY+
Sbjct: 113 GPNGQ--AIGFDPPESVGRRNRETLPLPPDASNTLYVEGLPSNCSRREVAHIFRPFVGYR 170
Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYP 220
EVRLV+K+S+H GDP++LCFVDF +PA AATA+ ALQGYR DE++ DS LRLQF+R P
Sbjct: 171 EVRLVTKDSKHRNGDPIVLCFVDFTNPACAATALSALQGYRMDENESDSKFLRLQFSRKP 230
Query: 221 GARSGGGHRGKR 232
G+R G RG+R
Sbjct: 231 GSRP--GQRGRR 240
>gi|125553883|gb|EAY99488.1| hypothetical protein OsI_21456 [Oryza sativa Indica Group]
Length = 227
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 141/217 (64%), Gaps = 41/217 (18%)
Query: 38 LSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGG-------QSARHMSGGMP 90
++ YY+RD++R R RDT++L ASY+R+LR+ QI SY G +S R +GG
Sbjct: 1 MAGYYSRDEERPGYRPARDTEALNASYERFLRTGQIQSYGAGAGAGPGAESIRPAAGGNA 60
Query: 91 SRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVA 150
PV+D ++ GGM+ R +G GGG E PLPPDAS+TLF+EG+P+DC+RREV+
Sbjct: 61 GYPVEDRPMMAGGGMEA------RNIGFGGGMPEPPLPPDASNTLFIEGIPTDCARREVS 114
Query: 151 HI----------------------------FRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
I FRPFVG++EVRLVSKE+RHPGGDP++LCFV
Sbjct: 115 RILKSHAFFCLSLIFHLHKFCWSFTFPQDIFRPFVGFREVRLVSKEARHPGGDPILLCFV 174
Query: 183 DFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARY 219
DF + + AA AMDALQGY+FDEHDR+S LRLQFAR+
Sbjct: 175 DFETASQAAIAMDALQGYKFDEHDRNSPHLRLQFARF 211
>gi|357110599|ref|XP_003557104.1| PREDICTED: uncharacterized protein LOC100821534 [Brachypodium
distachyon]
Length = 261
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/251 (50%), Positives = 155/251 (61%), Gaps = 40/251 (15%)
Query: 1 MADGYWRYS-DARQPQSALPSLVS--------------------KRPR-TDY-DVPSGHE 37
MAD YWRY+ D RQ Q + KRPR +Y DVP E
Sbjct: 1 MADAYWRYNADPRQLQQQQQQQMLPPSARAPNAAAPAAAGQQPLKRPRPAEYSDVPGSSE 60
Query: 38 LSSYYTRDDDRGALRGM------RDTDSLGASYDRYLRSAQISSYSGGQ---SARHMSGG 88
++ YY RD++R RDT +L ASY+RYLR+ QI S+ G S R +G
Sbjct: 61 MAGYYPRDEERAGYAAAAAAAAARDTQALNASYERYLRTGQIQSHGAGPAGGSIRPAAGA 120
Query: 89 MPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRRE 148
+DD V IGG++ R +G G G E PLPPDAS+TLF+EG+P+DC RRE
Sbjct: 121 NAGYQLDD--RVAIGGVE------GRNVGFGTGMPEPPLPPDASNTLFIEGIPNDCERRE 172
Query: 149 VAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRD 208
V+HIFRPFVG+KEVRLV+KE RHPGGDP++LCFVDF + A AA AM+ALQGY+FDEHDR
Sbjct: 173 VSHIFRPFVGFKEVRLVTKEPRHPGGDPIVLCFVDFTNAAQAAVAMEALQGYKFDEHDRT 232
Query: 209 SVKLRLQFARY 219
S LRLQFAR+
Sbjct: 233 SPHLRLQFARF 243
>gi|242081967|ref|XP_002445752.1| hypothetical protein SORBIDRAFT_07g025090 [Sorghum bicolor]
gi|241942102|gb|EES15247.1| hypothetical protein SORBIDRAFT_07g025090 [Sorghum bicolor]
Length = 203
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 134/204 (65%), Gaps = 10/204 (4%)
Query: 38 LSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDP 97
++ YY R+ DR +RD D++GASYDRYLR+ ++S + R G
Sbjct: 1 MTGYYPRETDRAGYHSLRDNDAIGASYDRYLRNG-MASVGANDTTRAAGMGAGMGAGMAA 59
Query: 98 RIVGIGGMDPGPSAKDRAL---------GLGGGRSEVPLPPDASSTLFVEGLPSDCSRRE 148
+ G G + GGR E PLPPDAS TL++EGLP++C+RRE
Sbjct: 60 GMGAGMGAAMGAGMAGYGVDDRRMMGVGMGYGGRPEPPLPPDASPTLYIEGLPANCTRRE 119
Query: 149 VAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRD 208
V+HIFRPFVG++EVRLV+KESRHPGGDP +LCFVDF +PA A A++ALQGY+FDEHDRD
Sbjct: 120 VSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATIALEALQGYKFDEHDRD 179
Query: 209 SVKLRLQFARYPGARSGGGHRGKR 232
S LRLQF+R+PG RS GG RG+R
Sbjct: 180 SAHLRLQFSRFPGPRSAGGPRGRR 203
>gi|238478568|ref|NP_001154354.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
gi|332191964|gb|AEE30085.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
Length = 253
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 154/254 (60%), Gaps = 26/254 (10%)
Query: 1 MADGYWRYSDARQ-PQSALPSLVS-KRPRTD-----YDVPSGHELSSYYTRDDDRGALRG 53
MAD YW Q P S+ P ++ KRPR+D Y +PSG ++ SY ++D+DRG
Sbjct: 1 MADEYWNQQRQYQLPISSNPHVLPPKRPRSDFQGTPYLIPSG-DMHSYLSQDEDRGIPHS 59
Query: 54 MRDTDSLGASYDRYLRSAQI--------SSYSGGQSARHMSGGMPSRPVDDPRIVGIGGM 105
++DT S+G++YDRYL+S Q ++G R M P + G GG
Sbjct: 60 VKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQGGSNMMPGPSMGELMAGCGGS 119
Query: 106 DPG---PSAKDRALGLGG-----GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFV 157
P P+ +D G GR PLPPD S+TL+VEGLPS+CSRREV+HIFRPFV
Sbjct: 120 LPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTLYVEGLPSNCSRREVSHIFRPFV 179
Query: 158 GYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFA 217
GY+EVRLV+++S+H GDP +LCFVDF + A AATA+ ALQ YR DE + DS LRLQF
Sbjct: 180 GYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQDYRMDEDEPDSKILRLQFF 239
Query: 218 RYPGARSG--GGHR 229
R PG R G GG R
Sbjct: 240 RNPGPRPGQRGGRR 253
>gi|116781380|gb|ABK22075.1| unknown [Picea sitchensis]
Length = 265
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/257 (46%), Positives = 159/257 (61%), Gaps = 26/257 (10%)
Query: 1 MADGYW-RYSDARQPQSALPSLVSKRPRTDYDVPSG--HELSSYYTRDD---DRGALRGM 54
M D YW R++ R +SA + +KRPR +YD+ + + Y R+D D + R +
Sbjct: 1 MGDTYWNRFAAERDGRSAALASAAKRPRNEYDLLTSGSRDGPGYLPREDPRLDERSRRLL 60
Query: 55 RDTDSLGASYDRYLRSAQISSYSGGQSA-----------RHMSGGMPSRPVDDPRIVGIG 103
R+TD LG +Y+RY R+ S S G +A R G+ +DD ++G
Sbjct: 61 RETDPLGPAYERYARNGLPSYGSSGLNAGDLGGLGMGLGRSAGSGLGGSALDDQVLMGRR 120
Query: 104 -GMDPGPSAKDRALGLGGGRSEVPL--------PPDASSTLFVEGLPSDCSRREVAHIFR 154
MD G K + LG + PL PPDAS+TLFVEGLP C+RRE AHIFR
Sbjct: 121 LSMDAGLGGKGQGLGFKDSQLRDPLRRPDNDHLPPDASNTLFVEGLPPKCTRREAAHIFR 180
Query: 155 PFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
PFVG+KEVRLV+KE+R+PGG+PL+LCFVDF +P AATAM+ALQGY+FDE++++S L+L
Sbjct: 181 PFVGFKEVRLVNKEARNPGGEPLVLCFVDFANPNCAATAMEALQGYKFDENEKESPSLKL 240
Query: 215 QFARYPGARSGGGHRGK 231
QFARYPG R GG G+
Sbjct: 241 QFARYPGPRGGGSSFGR 257
>gi|30699215|ref|NP_177820.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|119360107|gb|ABL66782.1| At1g76940 [Arabidopsis thaliana]
gi|332197785|gb|AEE35906.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 233
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/243 (48%), Positives = 151/243 (62%), Gaps = 21/243 (8%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPS-----GHELSSYYTRDDDRGALRGMR 55
MADGYW + ++ Q P KRPR+D++ PS GH YY RD+D +
Sbjct: 1 MADGYW---NQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHG-GGYYPRDEDLD----VP 52
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPS----RPVDD--PRIVGIGGMDPGP 109
DT ++G++YDRYL+S Q R GG + +DD R G+ +D GP
Sbjct: 53 DTRTIGSAYDRYLQSVQSGEGGSVSMGRSGGGGGGGGGNVQTIDDFMLRRGGVLPLDHGP 112
Query: 110 SAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES 169
+ LP DAS+TL+VEGLPS+CSRREVAHIFRPFVGY+EVRLV+K+S
Sbjct: 113 NGHTIGFDPPEPVGRRNLPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDS 172
Query: 170 RHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHR 229
+H GDP++LCFVDF +PA AATA+ ALQGYR DE++ DS LRLQF+R PG+R G R
Sbjct: 173 KHRNGDPIVLCFVDFTNPACAATALSALQGYRMDENESDSKFLRLQFSRKPGSRP--GQR 230
Query: 230 GKR 232
G+R
Sbjct: 231 GRR 233
>gi|186478724|ref|NP_173554.3| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
gi|332191963|gb|AEE30084.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
Length = 421
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/220 (49%), Positives = 139/220 (63%), Gaps = 19/220 (8%)
Query: 28 TDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQI--------SSYSGG 79
T Y +PSG ++ SY ++D+DRG ++DT S+G++YDRYL+S Q ++G
Sbjct: 203 TPYLIPSG-DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGV 261
Query: 80 QSARHMSGGMPSRPVDDPRIVGIGGMDPG---PSAKDRALG----LG-GGRSEVPLPPDA 131
R M P + G GG P P+ +D G +G GR PLPPD
Sbjct: 262 GMVRQGGSNMMPGPSMGELMAGCGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDV 321
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S+TL+VEGLPS+CSRREV+HIFRPFVGY+EVRLV+++S+H GDP +LCFVDF + A AA
Sbjct: 322 SNTLYVEGLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAA 381
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFARYPGARSG--GGHR 229
TA+ ALQ YR DE + DS LRLQF R PG R G GG R
Sbjct: 382 TALSALQDYRMDEDEPDSKILRLQFFRNPGPRPGQRGGRR 421
>gi|147806465|emb|CAN74250.1| hypothetical protein VITISV_019089 [Vitis vinifera]
Length = 337
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 141/247 (57%), Gaps = 46/247 (18%)
Query: 32 VPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSA-------------QISSYSG 78
+PSG+E+ +Y + DD G R ++D+ ++G +YD+Y + I S++
Sbjct: 53 LPSGNEVHNYLVQGDDLGGPRSVKDSKTVGLAYDQYFQDVCALKPEPMFILIRHIPSFTS 112
Query: 79 GQSARHMSGGMPSRPVDDPRIVGIGG-----------MDPGPSAKDRALG------LGGG 121
G ++ G+ + + + I G D PS R G +
Sbjct: 113 GAASDFRGVGLGTATGEAISGLSISGPAVMDHLEALDSDLPPSGXGRRFGHQLDAIIRPS 172
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVA----------------HIFRPFVGYKEVRLV 165
R PLPPDASSTL+VEGLP D +RREVA +IFRPFVGYKEVRLV
Sbjct: 173 RETAPLPPDASSTLYVEGLPPDSTRREVARILQDVITLPRNYCDSYIFRPFVGYKEVRLV 232
Query: 166 SKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSG 225
SKES+H G DPL+LCFVDF SPA AATA+ ALQGY+ EHDRDS ++RLQF++YP RSG
Sbjct: 233 SKESKHRGRDPLVLCFVDFTSPACAATALSALQGYKIXEHDRDSAQMRLQFSQYPDPRSG 292
Query: 226 GGHRGKR 232
G RGKR
Sbjct: 293 SGSRGKR 299
>gi|115477659|ref|NP_001062425.1| Os08g0547000 [Oryza sativa Japonica Group]
gi|42408101|dbj|BAD09242.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|42408712|dbj|BAD09930.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113624394|dbj|BAF24339.1| Os08g0547000 [Oryza sativa Japonica Group]
gi|215767903|dbj|BAH00132.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 294
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 131/183 (71%), Gaps = 16/183 (8%)
Query: 24 KRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSA 82
KR R DY DVP+G +++ YY R+ DR +R+ +++GASYDRYLR+ + S + ++
Sbjct: 62 KRARPDYGDVPAGQDMTGYYPRETDRTGYHALRENEAIGASYDRYLRNG-MPSVAATETN 120
Query: 83 RHMSGGMPSR------PVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLF 136
R + GGM PVDD R++G+G MD R +G G R E PLP DASSTL+
Sbjct: 121 RPVVGGMGGMGGMGGYPVDDRRMIGVG-MD------SRGMGYGA-RPEPPLPADASSTLY 172
Query: 137 VEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDA 196
VEGLP++C+RREV+HIFRPFVG++EVRLV+KESRHPGGDP +LCFVDF +PA A A++A
Sbjct: 173 VEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATLALEA 232
Query: 197 LQG 199
LQG
Sbjct: 233 LQG 235
>gi|413953429|gb|AFW86078.1| hypothetical protein ZEAMMB73_802063 [Zea mays]
Length = 130
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 100/121 (82%), Gaps = 2/121 (1%)
Query: 114 RALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPG 173
R +G GG E PLPPDAS+TL++EG+PSDC+RREV+HIFRPFVG++EVRLV+KE +HPG
Sbjct: 10 RNIGFVGGMPEPPLPPDASNTLYIEGVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPG 69
Query: 174 GDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARY--PGARSGGGHRGK 231
GDP++LCFVDF P +A A+DALQGY+FDEHDR+S LRLQFAR+ P SG G RG+
Sbjct: 70 GDPIVLCFVDFAEPTQSAIALDALQGYKFDEHDRNSPNLRLQFARFAGPKGNSGPGGRGR 129
Query: 232 R 232
R
Sbjct: 130 R 130
>gi|326490583|dbj|BAJ89959.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 333
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 132/192 (68%), Gaps = 23/192 (11%)
Query: 19 PSLVSKRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYS 77
PSL KR R DY D P G E++ YY R++ +RD +++GASYDRYLR+ + S +
Sbjct: 71 PSL--KRARPDYGDGPGGQEMAGYYPREN--AGYHSLRDNEAIGASYDRYLRNG-MPSVA 125
Query: 78 GGQSARHMSGGMPSR----------PVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPL 127
+ +R + G M PVDD R++G+ GMD RA+G G R E PL
Sbjct: 126 ANEPSRAVVGAMGGAAMVGGGMSGYPVDDRRMMGVVGMD------SRAMGYGA-RPEPPL 178
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PPDAS+TL++EGLP++C+RREV+HIFRPFVG++EVRLV+KESRHPGGDP +LCFVDF SP
Sbjct: 179 PPDASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDSP 238
Query: 188 AHAATAMDALQG 199
A A A++ALQG
Sbjct: 239 AQATIALEALQG 250
>gi|297850552|ref|XP_002893157.1| hypothetical protein ARALYDRAFT_472365 [Arabidopsis lyrata subsp.
lyrata]
gi|297338999|gb|EFH69416.1| hypothetical protein ARALYDRAFT_472365 [Arabidopsis lyrata subsp.
lyrata]
Length = 411
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 135/222 (60%), Gaps = 30/222 (13%)
Query: 28 TDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSARHMSG 87
T Y +PSG + SY +RD+DRG ++DT ++G++YD+YL + Q S ++
Sbjct: 200 TPYVMPSGG-MHSYLSRDEDRGIPHSVKDTRTIGSAYDQYLNN-QTPSVPSEEAGPFNGA 257
Query: 88 GMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG---------GRS--EVPLPPDASSTLF 136
GM + G M PGP + G GG GR+ PLPPD S+TL+
Sbjct: 258 GMGRQ--------GGNNMMPGPPMGELMAGRGGSFPSDFRPNGRAIGREPLPPDVSNTLY 309
Query: 137 VEGLPSDCSRREVA-------HIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
VEGLPS+CSRRE +FRPFVGY+EVRLV+K+S+H GDP++LCFVDF +PA
Sbjct: 310 VEGLPSNCSRRENVLSCSLSLTVFRPFVGYREVRLVTKDSKHRSGDPVVLCFVDFENPAC 369
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSG--GGHR 229
AATA+ ALQGYR DE + D LRLQF+R PG R G GG R
Sbjct: 370 AATALSALQGYRMDEAESDFKILRLQFSRNPGPRPGQRGGRR 411
>gi|357443731|ref|XP_003592143.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355481191|gb|AES62394.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|388515921|gb|AFK46022.1| unknown [Medicago truncatula]
Length = 147
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/113 (72%), Positives = 95/113 (84%), Gaps = 1/113 (0%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
G +PLP DASSTL+VEGLPSD ++REVAHIFRPFVGY+EVRLV+KES+H GGDPLILC
Sbjct: 35 GPETIPLPRDASSTLYVEGLPSDSTKREVAHIFRPFVGYREVRLVAKESKHRGGDPLILC 94
Query: 181 FVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGG-GHRGKR 232
FVDF +PA AATA+ ALQGY+ DE + +S LRLQF+R PG RSGG G RGKR
Sbjct: 95 FVDFANPACAATALSALQGYKVDEINPESSYLRLQFSRSPGRRSGGPGPRGKR 147
>gi|116781833|gb|ABK22259.1| unknown [Picea sitchensis]
Length = 274
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/101 (73%), Positives = 85/101 (84%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPPDAS+TLFVEGLP+DC+RRE AHIFRPF+G+KEVRLV KE R PGGDPL+LCFVDF
Sbjct: 152 LPPDASNTLFVEGLPADCTRREAAHIFRPFIGFKEVRLVQKEPRRPGGDPLVLCFVDFTD 211
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGG 227
AATA++ALQGY+FDE DR+S LRLQFAR+PG R G
Sbjct: 212 ARCAATALEALQGYKFDETDRESTGLRLQFARFPGPRGPSG 252
>gi|26450151|dbj|BAC42194.1| unknown protein [Arabidopsis thaliana]
Length = 156
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/106 (70%), Positives = 91/106 (85%), Gaps = 2/106 (1%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LP DAS+TL+VEGLPS+CSRREVAHIFRPFVGY+EVRLV+K+S+H GDP++LCFVDF +
Sbjct: 53 LPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTN 112
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
PA AATA+ ALQGYR DE++ DS LRLQF+R PG+R G RG+R
Sbjct: 113 PACAATALSALQGYRMDENESDSKFLRLQFSRKPGSRP--GQRGRR 156
>gi|334183951|ref|NP_001185414.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332197786|gb|AEE35907.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 179
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/106 (70%), Positives = 91/106 (85%), Gaps = 2/106 (1%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LP DAS+TL+VEGLPS+CSRREVAHIFRPFVGY+EVRLV+K+S+H GDP++LCFVDF +
Sbjct: 76 LPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTN 135
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
PA AATA+ ALQGYR DE++ DS LRLQF+R PG+R G RG+R
Sbjct: 136 PACAATALSALQGYRMDENESDSKFLRLQFSRKPGSRP--GQRGRR 179
>gi|313761403|gb|ADR79706.1| RNA binding protein U620 [Marsilea vestita]
Length = 118
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 82/96 (85%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
DA+STL+VEG+P+DCSRRE AHIFRPFVG+KEVRLV K+++ PGGD +LCFVDF P
Sbjct: 1 DATSTLYVEGVPADCSRREAAHIFRPFVGFKEVRLVRKDAKRPGGDQFVLCFVDFTDPKC 60
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSG 225
A+ A++ALQGY+FDE DR+S LRLQ++R+PG+R G
Sbjct: 61 ASIALEALQGYKFDETDRNSETLRLQYSRFPGSRPG 96
>gi|162462145|ref|NP_001105534.1| meg5 protein [Zea mays]
gi|47078331|gb|AAT09814.1| MEG5 [Zea mays]
Length = 163
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 89/111 (80%), Gaps = 7/111 (6%)
Query: 94 VDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIF 153
VD R++G+ GMD R +G GG R E PLPPDASSTL++EGLP++C+RREV+HIF
Sbjct: 6 VDGQRMMGVVGMD------SRGMGYGG-RPEPPLPPDASSTLYIEGLPANCTRREVSHIF 58
Query: 154 RPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDE 204
RPFVG++EVRLV+KESRHPGGDP +LCFVDF +PA A A++ALQG+ D+
Sbjct: 59 RPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATIALEALQGHVTDD 109
>gi|168024982|ref|XP_001765014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683823|gb|EDQ70230.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 97/139 (69%), Gaps = 10/139 (7%)
Query: 95 DDPRIVG--IGGMDPGPSAKDRALGLGGGRSE--------VPLPPDASSTLFVEGLPSDC 144
D+ +++G +G +D G + ALGL GG E LPPDASSTLFV+GLP DC
Sbjct: 20 DESQLMGARMGPLDVGMGGRPGALGLNGGAPEPDVLRGGLEVLPPDASSTLFVDGLPQDC 79
Query: 145 SRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDE 204
SRRE AHIFRPF+G+KEVRLV K+++ G ++LCFV+F AATA++ALQGY+FDE
Sbjct: 80 SRREAAHIFRPFIGFKEVRLVHKDAKRADGGKVVLCFVEFADARCAATALEALQGYKFDE 139
Query: 205 HDRDSVKLRLQFARYPGAR 223
D +S LRL FAR+PG R
Sbjct: 140 TDHESYVLRLTFARHPGPR 158
>gi|302760451|ref|XP_002963648.1| hypothetical protein SELMODRAFT_69289 [Selaginella moellendorffii]
gi|300168916|gb|EFJ35519.1| hypothetical protein SELMODRAFT_69289 [Selaginella moellendorffii]
Length = 92
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 77/92 (83%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LP DASSTLFV+GLPSDC+RRE AHIFRPF+G+KEVRLV K+++ G+ L+LCFV+F+
Sbjct: 1 LPHDASSTLFVDGLPSDCTRREAAHIFRPFIGFKEVRLVHKDAKRTTGEKLVLCFVEFMD 60
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
AATA++ALQGY+FDE+D DS LRL FAR
Sbjct: 61 AKCAATALEALQGYKFDENDPDSYVLRLTFAR 92
>gi|302785932|ref|XP_002974737.1| hypothetical protein SELMODRAFT_59352 [Selaginella moellendorffii]
gi|300157632|gb|EFJ24257.1| hypothetical protein SELMODRAFT_59352 [Selaginella moellendorffii]
Length = 92
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 77/92 (83%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LP DASSTLFV+GLPSDC+RRE AHIFRPF+G+KEVRLV K+++ G+ L+LCFV+F+
Sbjct: 1 LPHDASSTLFVDGLPSDCTRREAAHIFRPFIGFKEVRLVHKDAKRATGEKLVLCFVEFMD 60
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
AATA++ALQGY+FDE+D DS LRL FAR
Sbjct: 61 AKCAATALEALQGYKFDENDPDSYVLRLTFAR 92
>gi|224286216|gb|ACN40817.1| unknown [Picea sitchensis]
Length = 308
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
P ++S+T+F+EGLP+DCSRREVAHIFRPF+GYK+++++ KE R GG+P +LCFV+F
Sbjct: 199 PDESSNTIFIEGLPADCSRREVAHIFRPFIGYKQIKVIHKEPRRAGGEPYVLCFVEFTDA 258
Query: 188 AHAATAMDALQGYRFDEHDRD-SVKLRLQFARYPGAR 223
A TA+ AL+GY+FDEH+ D S L+LQ A +PG+R
Sbjct: 259 KCALTALSALKGYKFDEHEHDSSSSLKLQLANFPGSR 295
>gi|8920632|gb|AAF81354.1|AC036104_3 Contains weak similarity to bab503 major core protein from Simian
T-cell lymphotrophic virus type 1 gb|AF230486
[Arabidopsis thaliana]
Length = 430
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 117/220 (53%), Gaps = 42/220 (19%)
Query: 28 TDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQI--------SSYSGG 79
T Y +PSG ++ SY ++D+DRG ++DT S+G++YDRYL+S Q ++G
Sbjct: 203 TPYLIPSG-DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGV 261
Query: 80 QSARHMSGGMPSRPVDDPRIVGIGGMDPG---PSAKDRALG----LG-GGRSEVPLPPDA 131
R M P + G GG P P+ +D G +G GR PLPPD
Sbjct: 262 GMVRQGGSNMMPGPSMGELMAGCGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDV 321
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S+TL+VEGLPS+CSRRE + GDP +LCFVDF + A AA
Sbjct: 322 SNTLYVEGLPSNCSRRERS-----------------------GDPTVLCFVDFENSACAA 358
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFARYPGARSG--GGHR 229
TA+ ALQ YR DE + DS LRLQF R PG R G GG R
Sbjct: 359 TALSALQDYRMDEDEPDSKILRLQFFRNPGPRPGQRGGRR 398
>gi|225429574|ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257637 isoform 1 [Vitis
vinifera]
gi|296081671|emb|CBI20676.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 122/235 (51%), Gaps = 24/235 (10%)
Query: 1 MADGYWRYSDARQ----PQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRD 56
MAD YWR P+S+ P + D V + H L + +D GA
Sbjct: 1 MADPYWRRGAPSDRGSIPRSSFPGYLP----LDPSVSAAHHL---WGTNDLHGAPSDYPP 53
Query: 57 TDSLGA-----SYDRYL-RSAQISSYSGGQSARHMSGGMPSRPVDDPRIVG-----IGGM 105
D L +D + GG +A G P+ PV+DP ++G G+
Sbjct: 54 KDILPVRPGAHDFDDIMGIRVPPKPVIGGFTATTNIKGYPN-PVEDPNLIGQRRDVAHGI 112
Query: 106 DPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
PG +R G S +P P S+ LFV+GLP DC+RREV H+FRPF+G+KE+R+V
Sbjct: 113 SPGIPDIERPSSFGNVES-LPPPVQESNILFVDGLPKDCTRREVGHLFRPFIGFKEIRVV 171
Query: 166 SKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYP 220
KE RH G ++LCFV+F + + TA++ALQGY+FD+ DS LR+QFA +P
Sbjct: 172 HKEPRHSGDKAMVLCFVEFNDASCSRTALEALQGYKFDDKKPDSPTLRIQFAHFP 226
>gi|115480271|ref|NP_001063729.1| Os09g0527100 [Oryza sativa Japonica Group]
gi|113631962|dbj|BAF25643.1| Os09g0527100 [Oryza sativa Japonica Group]
Length = 149
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S TL+VEGLPS+C++REVAHIFRPF G++EVRLV+KESRH G L LCFVDF SP A
Sbjct: 50 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCNL-LCFVDFSSPPEAR 108
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGG 227
A++ LQGY+FDEHD +S LR QF+ P RS GG
Sbjct: 109 AALETLQGYKFDEHDHESSNLRTQFSLTPRRRSIGG 144
>gi|215707027|dbj|BAG93487.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 135
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S TL+VEGLPS+C++REVAHIFRPF G++EVRLV+KESRH G L LCFVDF SP A
Sbjct: 36 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCNL-LCFVDFSSPPEAR 94
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGG 227
A++ LQGY+FDEHD +S LR QF+ P RS GG
Sbjct: 95 AALETLQGYKFDEHDHESSNLRTQFSLTPRRRSIGG 130
>gi|218202488|gb|EEC84915.1| hypothetical protein OsI_32114 [Oryza sativa Indica Group]
gi|222641952|gb|EEE70084.1| hypothetical protein OsJ_30080 [Oryza sativa Japonica Group]
Length = 119
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S TL+VEGLPS+C++REVAHIFRPF G++EVRLV+KESRH G L LCFVDF SP A
Sbjct: 20 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCNL-LCFVDFSSPPEAR 78
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGG 227
A++ LQGY+FDEHD +S LR QF+ P RS GG
Sbjct: 79 AALETLQGYKFDEHDHESSNLRTQFSLTPRRRSIGG 114
>gi|215693881|dbj|BAG89080.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 119
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/96 (64%), Positives = 74/96 (77%), Gaps = 1/96 (1%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S TL+VEGLPS+C++REVAHIFRPF G++EVRLV+KESRH G L LCFVDF SP A
Sbjct: 20 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCNL-LCFVDFSSPPEAR 78
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGG 227
A++ LQGY+FDEHD +S LR QF+ P RS GG
Sbjct: 79 AALETLQGYKFDEHDHESSNLRTQFSLTPRRRSIGG 114
>gi|62867580|emb|CAI84655.1| hypothetical protein [Nicotiana tabacum]
Length = 183
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 115/190 (60%), Gaps = 32/190 (16%)
Query: 1 MADGYW-RYSDARQPQSALPSLVSKRPRTDY--DVP-----SGHELSSYYTRDDDRGALR 52
M D YW ++ +A PQSA + KRPR++Y D+P S HE+ Y RDDDRG R
Sbjct: 1 MGDAYWNQHREAPLPQSAG---LLKRPRSEYVPDLPPSGMSSAHEMHHYLGRDDDRGGPR 57
Query: 53 GMRDTDSLGASYDRYLRS--------AQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGG 104
+ DT S+G++YDRYL+S + ++Y G AR +GG+ S PV DP G
Sbjct: 58 -VVDTQSIGSAYDRYLQSSQLSSLSVGEANNYKGVGLARAGAGGISSLPVRDPLPSARG- 115
Query: 105 MDPGPSAKDRALGLGGG---------RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRP 155
P + RA+ L G R +PLPPDAS+TL++EGLP+D SRREVAHIFRP
Sbjct: 116 --PELAPNGRAMVLRGQMPVESLPRPRETLPLPPDASNTLYIEGLPADSSRREVAHIFRP 173
Query: 156 FVGYKEVRLV 165
FVGYKEVRLV
Sbjct: 174 FVGYKEVRLV 183
>gi|115480273|ref|NP_001063730.1| Os09g0527500 [Oryza sativa Japonica Group]
gi|52077323|dbj|BAD46364.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113631963|dbj|BAF25644.1| Os09g0527500 [Oryza sativa Japonica Group]
gi|218202489|gb|EEC84916.1| hypothetical protein OsI_32115 [Oryza sativa Indica Group]
gi|222641953|gb|EEE70085.1| hypothetical protein OsJ_30081 [Oryza sativa Japonica Group]
Length = 235
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 1/98 (1%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S TL+VEGLPS+C++REVAHIFRPF G++EVRLV+KE RH G L LCFVDF SP A
Sbjct: 136 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKEIRHAGSCNL-LCFVDFSSPPEAR 194
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHR 229
A++ LQGY+FDEHD +S LR+QF+ P R GG R
Sbjct: 195 AALETLQGYKFDEHDHESSNLRIQFSLTPRRRPIGGPR 232
>gi|224088786|ref|XP_002308540.1| predicted protein [Populus trichocarpa]
gi|222854516|gb|EEE92063.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 73/95 (76%)
Query: 126 PLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFV 185
P+P S+ LFV+GLP+DC+RREV H+FRPF+GYKE+R+V KE+R G +LCFV+F
Sbjct: 167 PVPKGESNILFVDGLPTDCTRREVGHLFRPFIGYKEIRVVHKEARKSGDRATVLCFVEFT 226
Query: 186 SPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYP 220
AATAM+ALQGY+FD+ DS L++QFAR+P
Sbjct: 227 DANCAATAMEALQGYKFDDKKPDSPTLKIQFARFP 261
>gi|218197575|gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indica Group]
Length = 232
Score = 119 bits (299), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 85/146 (58%), Gaps = 12/146 (8%)
Query: 93 PVDDPRIV------GIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSR 146
P++DP +V G P L L G R D S+ LFV+GLP+DC+R
Sbjct: 88 PLEDPALVRRSSSLGKTASIPDVEHPRPLLNLDGPRE------DESNILFVDGLPTDCTR 141
Query: 147 REVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHD 206
REVAH+FRPFVG+K++RLV KE RH +LCFV+F A TAM+ALQ YRFDE
Sbjct: 142 REVAHLFRPFVGFKDIRLVHKEPRHSSDRAYVLCFVEFSDAKCAITAMEALQEYRFDERK 201
Query: 207 RDSVKLRLQFARYPGARSGGGHRGKR 232
D+ L ++FAR+P + H +R
Sbjct: 202 PDAAVLNIKFARFPFRPAAAPHDDRR 227
>gi|357465775|ref|XP_003603172.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355492220|gb|AES73423.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 229
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 77/122 (63%)
Query: 99 IVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVG 158
++G+ P P A + +P+ S+ LFV GLP DC+RREV H+FRPF+G
Sbjct: 99 LLGVSTGVPDPIANNERSISKSNYDALPVSAAESNILFVGGLPKDCTRREVGHLFRPFIG 158
Query: 159 YKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
YK++++V KE R G +I CFV+F P A TAM+ALQGY+FD+ DS L+++FA
Sbjct: 159 YKDIKVVHKEPRRSGDKAMIFCFVEFTEPKCALTAMEALQGYKFDDKKPDSPTLKIKFAH 218
Query: 219 YP 220
+P
Sbjct: 219 FP 220
>gi|388521817|gb|AFK48970.1| unknown [Lotus japonicus]
Length = 229
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 109/194 (56%), Gaps = 24/194 (12%)
Query: 38 LSSYYTRDDDRGALRGMRDTDSLGASY-DRYLRSAQISSYSGGQSARHMSGGMPSRPVDD 96
L+S Y R + LRG +GA Y + +++ YS A + SR + +
Sbjct: 37 LASPYPRFSNSAELRG------IGADYLQNDINLSRVGPYSSVDDA------VSSRVLSE 84
Query: 97 PRIVGIGGMDPGP---SAKDRALGLGGG-RSEVPLPPDA------SSTLFVEGLPSDCSR 146
P I G +D P + +D +LG+ SE P+P S+ LFV+ LP DC+R
Sbjct: 85 PNIKGYSPLD-DPVLRTKRDTSLGVNPDVSSERPIPKANREGLADSNVLFVDVLPRDCTR 143
Query: 147 REVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHD 206
REV H+FRPF+GYK++R+V KE R G ++LCFV+F A TAM+ALQGY+FD+
Sbjct: 144 REVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFDDSKCALTAMEALQGYKFDDKK 203
Query: 207 RDSVKLRLQFARYP 220
DS L++QFA +P
Sbjct: 204 PDSRTLKIQFAHFP 217
>gi|449447147|ref|XP_004141330.1| PREDICTED: uncharacterized protein LOC101211987 [Cucumis sativus]
gi|449486681|ref|XP_004157367.1| PREDICTED: uncharacterized protein LOC101228687 [Cucumis sativus]
Length = 246
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 70/95 (73%)
Query: 126 PLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFV 185
P P S+ LFV+GLP+DC+RREV H+FRPF+GYK++R+V KE R G ++LCFV+FV
Sbjct: 141 PSPLRESNVLFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRTGDKAMVLCFVEFV 200
Query: 186 SPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYP 220
+ AM+ALQGY+FD+ DS L++QFA +P
Sbjct: 201 EAKFSQAAMEALQGYKFDDKKPDSPVLKIQFAHFP 235
>gi|294463261|gb|ADE77166.1| unknown [Picea sitchensis]
Length = 376
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 107/190 (56%), Gaps = 17/190 (8%)
Query: 53 GMRDTDSLGASYDRYLRSAQISSYSGGQSARHMSG---GMPSRPV-----DDPRIVGIGG 104
G R+ D L D + R I+ +GG A G G+ S+ V DD ++G G
Sbjct: 175 GWRERDPLIGGRDLF-RDKTING-TGGMHANDFEGTVLGIGSKRVHSASFDDTSLIGSGS 232
Query: 105 -MDPGPSAKDRALGLGGGRSEVPLPPDASST-----LFVEGLPSDCSRREVAHIFRPFVG 158
D G + +LG G ++ L + + LF++GLP DC+ RE AHIFRPF+G
Sbjct: 233 RFDRGMGSLQGSLGRDGHGRDIALTGGGADSAREPVLFIDGLPLDCTVREAAHIFRPFIG 292
Query: 159 YKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+KEVR+V KE + PGG+ +LCFV+F HAA A +ALQGY+ DEHD +S LR+ F+
Sbjct: 293 FKEVRVVHKEPKRPGGEKSVLCFVEFTDLRHAAIAREALQGYKVDEHDPNSGTLRISFSL 352
Query: 219 YPGARSGGGH 228
Y +R G H
Sbjct: 353 YS-SRKGSHH 361
>gi|293334753|ref|NP_001168219.1| hypothetical protein [Zea mays]
gi|223946801|gb|ACN27484.1| unknown [Zea mays]
gi|414591373|tpg|DAA41944.1| TPA: hypothetical protein ZEAMMB73_165038 [Zea mays]
Length = 441
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 75/108 (69%), Gaps = 8/108 (7%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES-RHPGGDPLIL 179
G E LPPDA++T++VEGLP +C+RREVAHIFR ++G+ E+RLV+K S +H L
Sbjct: 340 GAPEPSLPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLVNKGSNKH-------L 392
Query: 180 CFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGG 227
CFVDF +PA A AM LQGY+FDE D S L LQF+R P S GG
Sbjct: 393 CFVDFATPAQAFFAMRNLQGYKFDEQDPHSRILNLQFSRSPRMGSHGG 440
>gi|357110782|ref|XP_003557195.1| PREDICTED: uncharacterized protein LOC100823400 [Brachypodium
distachyon]
Length = 209
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 67/91 (73%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D S+ LFV+GLP+DC RREVAH+FRPFVG+K++RLV KE R G +LCFV+F
Sbjct: 103 DESNILFVDGLPTDCKRREVAHLFRPFVGFKDLRLVHKEPRRSGDKAYVLCFVEFNDAKC 162
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFARYP 220
A TAM ALQ YRFDE D+ L++QFAR+P
Sbjct: 163 AFTAMQALQEYRFDERKPDAPVLKIQFARFP 193
>gi|224033783|gb|ACN35967.1| unknown [Zea mays]
Length = 331
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 75/108 (69%), Gaps = 8/108 (7%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGDPLIL 179
G E LPPDA++T++VEGLP +C+RREVAHIFR ++G+ E+RLV+K ++H L
Sbjct: 230 GAPEPSLPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLVNKGSNKH-------L 282
Query: 180 CFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGG 227
CFVDF +PA A AM LQGY+FDE D S L LQF+R P S GG
Sbjct: 283 CFVDFATPAQAFFAMRNLQGYKFDEQDPHSRILNLQFSRSPRMGSHGG 330
>gi|356514689|ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809186 [Glycine max]
Length = 228
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/96 (53%), Positives = 70/96 (72%)
Query: 125 VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
+P+ S+ LFV GLP+DC+RREV H+FRPF+GYK++R+V KE R G + LCFV+F
Sbjct: 113 LPISAADSNILFVGGLPNDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEF 172
Query: 185 VSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYP 220
V A TAM+ALQGY+FD+ DS L+++FA +P
Sbjct: 173 VDSKCALTAMEALQGYKFDDKKPDSPTLKIEFAHFP 208
>gi|413953431|gb|AFW86080.1| hypothetical protein ZEAMMB73_802063, partial [Zea mays]
Length = 177
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 81/127 (63%), Gaps = 9/127 (7%)
Query: 31 DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSA---RHMSG 87
DVP + + YY RD++R R RDT+SL ASY+R+LR+ QI S+ GG + R G
Sbjct: 42 DVPGAPDTAGYYPRDEERAGYRAARDTESLNASYERFLRTGQIQSFGGGHAGEPIRPAVG 101
Query: 88 GMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRR 147
G + PVDD ++ GMD R +G GG E PLPPDAS+TL++EG+PSDC+RR
Sbjct: 102 GNAAYPVDDRSMMAARGMD------SRNIGFVGGMPEPPLPPDASNTLYIEGVPSDCTRR 155
Query: 148 EVAHIFR 154
EV+ I R
Sbjct: 156 EVSRILR 162
>gi|414591374|tpg|DAA41945.1| TPA: hypothetical protein ZEAMMB73_165038 [Zea mays]
Length = 469
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 72/101 (71%), Gaps = 8/101 (7%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES-RHPGGDPLIL 179
G E LPPDA++T++VEGLP +C+RREVAHIFR ++G+ E+RLV+K S +H L
Sbjct: 340 GAPEPSLPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLVNKGSNKH-------L 392
Query: 180 CFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYP 220
CFVDF +PA A AM LQGY+FDE D S L LQF+R P
Sbjct: 393 CFVDFATPAQAFFAMRNLQGYKFDEQDPHSRILNLQFSRSP 433
>gi|242045360|ref|XP_002460551.1| hypothetical protein SORBIDRAFT_02g030530 [Sorghum bicolor]
gi|241923928|gb|EER97072.1| hypothetical protein SORBIDRAFT_02g030530 [Sorghum bicolor]
Length = 122
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 8/108 (7%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES-RHPGGDPLIL 179
G E LP DA+ST++VEGLP++C+RREVAHIFR ++G+ +RLV+K S RH L
Sbjct: 21 GAPEPSLPRDATSTIYVEGLPTNCTRREVAHIFRQYMGFLGMRLVNKGSNRH-------L 73
Query: 180 CFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGG 227
CFVDF +PA A AM LQGYRFDE D S L+LQF+ P S GG
Sbjct: 74 CFVDFATPAQAFLAMRTLQGYRFDEQDPHSRILKLQFSHSPRMGSHGG 121
>gi|363807398|ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycine max]
gi|255647054|gb|ACU23995.1| unknown [Glycine max]
Length = 220
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 67/96 (69%)
Query: 125 VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
+P+ S+ LFV GLP DC+RREV H+FRPF+GYK++R+V KE R G + LCFV+F
Sbjct: 112 LPISAADSNILFVGGLPKDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEF 171
Query: 185 VSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYP 220
V A TA++ LQGY+FD+ DS L++Q A +P
Sbjct: 172 VDSNCALTALETLQGYKFDDKKPDSPTLKIQPAHFP 207
>gi|255550095|ref|XP_002516098.1| conserved hypothetical protein [Ricinus communis]
gi|223544584|gb|EEF46100.1| conserved hypothetical protein [Ricinus communis]
Length = 243
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 66/89 (74%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S+ LFV+GLP+DC+RREV H+FRPF+GYK+++++ +E R G ++ CFV+F A
Sbjct: 139 SNILFVDGLPTDCTRREVGHLFRPFIGYKDIKVIHREPRRDGDKAMVYCFVEFADAKCAI 198
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFARYP 220
TAM+ALQGY+FD+ +S LR+ AR+P
Sbjct: 199 TAMEALQGYKFDDRRSNSPVLRIHLARFP 227
>gi|302771087|ref|XP_002968962.1| hypothetical protein SELMODRAFT_38126 [Selaginella moellendorffii]
gi|302816665|ref|XP_002990011.1| hypothetical protein SELMODRAFT_38125 [Selaginella moellendorffii]
gi|300142322|gb|EFJ09024.1| hypothetical protein SELMODRAFT_38125 [Selaginella moellendorffii]
gi|300163467|gb|EFJ30078.1| hypothetical protein SELMODRAFT_38126 [Selaginella moellendorffii]
Length = 73
Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats.
Identities = 46/73 (63%), Positives = 62/73 (84%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+AS+TLFV+GLP DC+RRE AHIFRPF+G+KEVR+V K+++ G+ ++LCFV+F
Sbjct: 1 LPPEASATLFVDGLPIDCTRREAAHIFRPFIGFKEVRVVHKDAKRAVGEKIVLCFVEFAD 60
Query: 187 PAHAATAMDALQG 199
P AATA++ALQG
Sbjct: 61 PRCAATALEALQG 73
>gi|217075194|gb|ACJ85957.1| unknown [Medicago truncatula]
Length = 107
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY++ +Q A P++ KRPRT+YDV H L++Y+ DDDRG L+ +RDT+SL
Sbjct: 1 MSDAYWRYAEPQQ--HAPPTIPGKRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGM 105
ASY+RYLR+A ISS+ GQS R + GG+PS +DD + +G +
Sbjct: 59 DASYERYLRNA-ISSHGSGQSTRTIDGGVPSHSIDDSHVTSMGEL 102
>gi|226492197|ref|NP_001148276.1| LOC100281884 [Zea mays]
gi|195617106|gb|ACG30383.1| nucleic acid binding protein [Zea mays]
Length = 297
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 92/169 (54%), Gaps = 29/169 (17%)
Query: 77 SGGQSARHMSGGMPSRPVDDPRIVGIGGMDP----GPSAKDRALGLGGGRSEV------- 125
+GG +AR SG + +DP + G+ G+ P GP A L + G S V
Sbjct: 120 TGGATARG-SGAL-----EDPSLAGLSGLAPARALGPRALKEELDVVGRSSSVGRGASIP 173
Query: 126 ------PLP------PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPG 173
+P + S+ LFV+ LP+DC+RREVAH+FR F G+K++R+V KE R G
Sbjct: 174 DVEHHSSIPNFDGPSENESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPRRSG 233
Query: 174 GDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGA 222
+LCFV+F + A T M ALQGYRFD+ D L + FAR+P A
Sbjct: 234 DKAYVLCFVEFENAKFARTPMQALQGYRFDDRKPDDRCLEIHFARFPFA 282
>gi|225429572|ref|XP_002280083.1| PREDICTED: uncharacterized protein LOC100257637 isoform 2 [Vitis
vinifera]
Length = 229
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 85/148 (57%), Gaps = 17/148 (11%)
Query: 78 GGQSARHMSGGMPSRPVDDPRIVG-----IGGMDPGPSAKDRALGLGGGRSEVPLPPDAS 132
GG +A G P+ PV+DP ++G G+ PG +R G S +P P S
Sbjct: 81 GGFTATTNIKGYPN-PVEDPNLIGQRRDVAHGISPGIPDIERPSSFGNVES-LPPPVQES 138
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+ LFV+GLP DC+RREV ++R+V KE RH G ++LCFV+F + + T
Sbjct: 139 NILFVDGLPKDCTRREVG----------QIRVVHKEPRHSGDKAMVLCFVEFNDASCSRT 188
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP 220
A++ALQGY+FD+ DS LR+QFA +P
Sbjct: 189 ALEALQGYKFDDKKPDSPTLRIQFAHFP 216
>gi|110430655|gb|ABG73445.1| RNA recognition motif family protein [Oryza brachyantha]
Length = 237
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 104/215 (48%), Gaps = 42/215 (19%)
Query: 18 LPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYS 77
+PS +RP + +PSG E + L M + S Y +L + Y+
Sbjct: 65 VPSFKRQRPEY-FGMPSGQE---------NGACLEKMSQSSS--PIYGHHLNNK--IPYA 110
Query: 78 GGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFV 137
G + GGM P+ + ++G G+D +G R+ P DAS+
Sbjct: 111 GANQSAMPLGGMVGHPMHNNHMMGTTGLD--------NRNIGATRTNATSPRDASN---- 158
Query: 138 EGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDAL 197
IFRPF G++EVRLV+KESRH G L LCFVDF +P+ A +A++ L
Sbjct: 159 --------------IFRPFSGFREVRLVNKESRHAGRYNL-LCFVDFATPSEARSALETL 203
Query: 198 QGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
QGY+FDEHD S LR++ + R GG RG++
Sbjct: 204 QGYKFDEHDHQSSNLRIELS-LSRTRPIGGPRGRK 237
>gi|307109197|gb|EFN57435.1| hypothetical protein CHLNCDRAFT_142904 [Chlorella variabilis]
Length = 529
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 70/107 (65%), Gaps = 7/107 (6%)
Query: 119 GGGRSEV-------PLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GG R E+ PPDA +TL++EGLPSD +RRE+ HIFR G++ +RLV K+S+
Sbjct: 406 GGQRGEILAPTAMRQYPPDACNTLYIEGLPSDVTRRELGHIFRSREGFRSLRLVIKDSKK 465
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
G+ L++ FV++ S AA AMD LQGY FD + +++ ++FAR
Sbjct: 466 HVGEKLVMAFVEYSSTYFAAQAMDTLQGYPFDLDNPETMTFFVKFAR 512
>gi|384247133|gb|EIE20621.1| hypothetical protein COCSUDRAFT_83539 [Coccomyxa subellipsoidea
C-169]
Length = 321
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 72/128 (56%), Gaps = 8/128 (6%)
Query: 101 GIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
+ G PGP + + E LPP+A+ TLF+ GLP ++REVAHI RP G+K
Sbjct: 112 AMNGQRPGPQVE---IVQPEAEEEEVLPPEANPTLFLSGLPLKITKREVAHILRPCEGFK 168
Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR-- 218
E+RLV K R+ ++ CF +F S AA AM+ LQGY D D+DS LR+ +AR
Sbjct: 169 ELRLVQKVDRN--NKDVMWCFAEFSSKQLAARAMNDLQGYAVDLDDQDSPTLRISYARAL 226
Query: 219 -YPGARSG 225
P R G
Sbjct: 227 NNPKVREG 234
>gi|145499741|ref|XP_001435855.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402991|emb|CAK68458.1| unnamed protein product [Paramecium tetraurelia]
Length = 124
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
P P ++ L + D++ +L+V+G+P+D REVAHIFRP+ G++ VRL+
Sbjct: 7 PNPMFNNQYFELIRDNQQFQPQKDSTHSLYVDGIPNDAQEREVAHIFRPYPGFQRVRLIK 66
Query: 167 KESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKL 212
K+++ G +LCFVDF A M LQGYRFD++D+ +K+
Sbjct: 67 KQTQ--KGREYLLCFVDFDDAFQATIVMQTLQGYRFDKNDKTGLKI 110
>gi|145491995|ref|XP_001431996.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399103|emb|CAK64598.1| unnamed protein product [Paramecium tetraurelia]
Length = 124
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
P P ++ L + +++ +L+V+G+P+D REVAHIFRP+ G++ VRL+
Sbjct: 7 PNPMFNNQYFELIRDNQQFQPQKESTHSLYVDGIPNDAQEREVAHIFRPYPGFQRVRLIK 66
Query: 167 KESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKL 212
K+++ G +LCFVDF A M LQGYRFD++D+ +K+
Sbjct: 67 KQTQ--KGREYLLCFVDFDDALQATIVMQTLQGYRFDKNDKTGLKI 110
>gi|403347348|gb|EJY73094.1| RRM domain containing protein [Oxytricha trifallax]
Length = 429
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
+ +P+P +A++T++VEGLP D + REVAHIFRPF+G+K++RL+ ++++ G + F
Sbjct: 303 KHNLPIPKNATNTVYVEGLPHDTTEREVAHIFRPFLGFKQLRLIPRDTK--DGQRVHFAF 360
Query: 182 VDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFA 217
DF S ++ LQGYRF H D + L+ +A
Sbjct: 361 ADFESVYQTTMVINTLQGYRF--HKDDIIGLQFSYA 394
>gi|229595477|ref|XP_001017208.3| hypothetical protein TTHERM_00194550 [Tetrahymena thermophila]
gi|225565995|gb|EAR96963.3| hypothetical protein TTHERM_00194550 [Tetrahymena thermophila
SB210]
Length = 616
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+A+++L+V+G+P D + REV+HIFRPF G++ VRL+ K R G CFVDF S
Sbjct: 452 EATNSLYVDGVPIDSNEREVSHIFRPFPGFQAVRLIRK--RTQAGREFYFCFVDFESALQ 509
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFARYP 220
+ A+ LQGYRFD+ +D+ L++ +A P
Sbjct: 510 STIALRTLQGYRFDK--KDTQGLKISYANEP 538
>gi|147810268|emb|CAN75823.1| hypothetical protein VITISV_004156 [Vitis vinifera]
Length = 441
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 94 VDDPRIVG-----IGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRRE 148
+++P ++G G+ PG +R L S PL + S+ LFV+GLP +RRE
Sbjct: 289 LENPNLIGQRRDVAHGISPGIPDIERPNSLRNVESLPPLVRE-SNILFVDGLPKYYTRRE 347
Query: 149 VAHIFRPFVGYKEVRLVSKESRHPGGDP-LILCFVDFVSPAHAATAMDALQGYRFDEHDR 207
V H+F PF+ +KE+R+V KE R GD ++LCFV+F + TA++ALQGY F +
Sbjct: 348 VGHLFLPFIDFKEIRVVHKEPRCNSGDKAMVLCFVEFNDAKCSRTALEALQGYIFVDKKP 407
Query: 208 DSVKLRLQ 215
DS L +Q
Sbjct: 408 DSPALGIQ 415
>gi|212722122|ref|NP_001131419.1| uncharacterized protein LOC100192748 [Zea mays]
gi|194691466|gb|ACF79817.1| unknown [Zea mays]
Length = 270
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 29/146 (19%)
Query: 77 SGGQSARHMSGGMPSRPVDDPRIVGIGGMDP----GPSAKDRALGLGGGRSEV------- 125
+GG +AR SG + +DP + G+ G+ P GP A L + G S V
Sbjct: 120 TGGATARG-SGAL-----EDPSLAGLSGLAPARALGPRALKEELDVVGRSSSVGRGASIP 173
Query: 126 ------PLP------PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPG 173
+P + S+ LFV+ LP+DC+RREVAH+FR F G+K++R+V KE R G
Sbjct: 174 DVEHHSSIPNFDGPSENESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPRRSG 233
Query: 174 GDPLILCFVDFVSPAHAATAMDALQG 199
+LCFV+F + A T M ALQG
Sbjct: 234 DKAYVLCFVEFENAKFARTPMQALQG 259
>gi|343887275|dbj|BAK61821.1| RRM-containing protein [Citrus unshiu]
Length = 231
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 17/136 (12%)
Query: 91 SRPVDDPRIVGIG-GMDPG--PSAKDRALGLGG---GRSEVPLPPDASSTLFVEGLPSDC 144
S P+ DP ++G + PG P+ D G+ + PL S+ LFV+GLP+DC
Sbjct: 93 SSPLPDPNLIGQRRDIAPGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDC 152
Query: 145 SRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDE 204
+RREV+ I L++ S G ++LCFV+F P A TAMDAL GY+FD+
Sbjct: 153 TRREVSRI-----------LLNVSSTCSGDRAMVLCFVEFDDPKCARTAMDALHGYKFDD 201
Query: 205 HDRDSVKLRLQFARYP 220
DS L++QFA +P
Sbjct: 202 KKPDSPALKIQFAHFP 217
>gi|403345552|gb|EJY72148.1| hypothetical protein OXYTRI_06855 [Oxytricha trifallax]
Length = 425
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 19/110 (17%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAH-------------IFRPFVGYKEVRLVSK 167
G + +P+P +A++T++VEG+P D S REVA IFRP+ G+K VRL+ +
Sbjct: 307 GPNIMPIPKNATNTVYVEGIPLDASEREVARKILSHFYQSFSLDIFRPYPGFKSVRLIPR 366
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFA 217
E + G+ +I CF DF + ++ LQGYRFD+ D L LQF+
Sbjct: 367 EKK--PGEKVIFCFADFENAFQTTLVINTLQGYRFDKDD----ILGLQFS 410
>gi|440800677|gb|ELR21712.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 341
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 76/144 (52%), Gaps = 23/144 (15%)
Query: 85 MSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVP----------------LP 128
++ G+P P+ G+ M PGP++ D + G+ + P L
Sbjct: 178 LTSGLPLVPM------GVSPMMPGPTSLDMS-GMQFYSTVAPNAQFASYVQPQAYSPQLS 230
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
PDA+ TL+VEGLP D + REVAHIFR GY +R+ KES+ LC+V+F +
Sbjct: 231 PDAAPTLYVEGLPLDATEREVAHIFRQMPGYLGIRIKPKESKQHPSRVFNLCWVEFETKY 290
Query: 189 HAATAMDALQGYRFDEHDRDSVKL 212
+AA A+ L+GY+ D++D + +
Sbjct: 291 NAAVALHHLKGYKMDKNDTKGLTI 314
>gi|303286151|ref|XP_003062365.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455882|gb|EEH53184.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 107
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 7/93 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES-RHPGGDPLILCFVDFVSPA 188
DAS TL++EG+P D + RE+AHIFRPF G++ RLV KE+ R P LCF +F
Sbjct: 14 DASPTLYIEGVPHDATVREIAHIFRPFDGFQSTRLVKKENVRGP------LCFAEFAGAD 67
Query: 189 HAATAMDALQGYRFDEHDRDSVKLRLQFARYPG 221
A A++ LQGY D D S LR+ FA+ G
Sbjct: 68 LAFAALNTLQGYVLDRDDPKSPALRIVFAKSKG 100
>gi|222634952|gb|EEE65084.1| hypothetical protein OsJ_20123 [Oryza sativa Japonica Group]
Length = 180
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 46/67 (68%)
Query: 152 IFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVK 211
+FRPFVG+K++RLV KE RH +LCFV+F A TAM+ALQ YRFDE D+
Sbjct: 4 LFRPFVGFKDIRLVHKEPRHSSDRAYVLCFVEFSDAKCAITAMEALQEYRFDERKPDAAV 63
Query: 212 LRLQFAR 218
L ++FAR
Sbjct: 64 LNIKFAR 70
>gi|255075217|ref|XP_002501283.1| predicted protein [Micromonas sp. RCC299]
gi|226516547|gb|ACO62541.1| predicted protein [Micromonas sp. RCC299]
Length = 323
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+AS TL + G+P D + RE+ HIFRPF G++ RLV S+ P P LCF +F +P
Sbjct: 229 NASPTLHISGVPKDATVREICHIFRPFDGFQSARLVP--SKDPERGP--LCFAEFTNPEL 284
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A++ L+GY D D DS L + FA+
Sbjct: 285 AFVALETLEGYLIDRDDPDSSALHIAFAK 313
>gi|222634953|gb|EEE65085.1| hypothetical protein OsJ_20124 [Oryza sativa Japonica Group]
Length = 236
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 93 PVDDPRIV------GIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSR 146
P++DP +V G P L L G R D S+ LFV+GLP+DC+R
Sbjct: 88 PLEDPALVRRSSSLGKTASIPDVEHPRPLLNLDGPRE------DESNILFVDGLPTDCTR 141
Query: 147 REVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
REVAH+FRPFVG+K++RLV KE RH P F+ + T +
Sbjct: 142 REVAHLFRPFVGFKDIRLVHKEPRHVRAFPFQCINFFFLVEKYGWTVL 189
>gi|302844823|ref|XP_002953951.1| hypothetical protein VOLCADRAFT_106208 [Volvox carteri f.
nagariensis]
gi|300260763|gb|EFJ44980.1| hypothetical protein VOLCADRAFT_106208 [Volvox carteri f.
nagariensis]
Length = 817
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LP DA+++L++E LP+D + RE+ HIFRPF G+ +RLV KE H + FVDF
Sbjct: 467 LPSDATNSLYLENLPTDVTHRELTHIFRPFAGFVTLRLVVKE--HTNREKSAKAFVDFTD 524
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFARYP 220
A AM AL GY+ D + LR +AR P
Sbjct: 525 AQAATAAMSALNGYQLDLEGQTPHVLRPVYARPP 558
>gi|330840143|ref|XP_003292080.1| hypothetical protein DICPUDRAFT_89664 [Dictyostelium purpureum]
gi|325077715|gb|EGC31410.1| hypothetical protein DICPUDRAFT_89664 [Dictyostelium purpureum]
Length = 328
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
GG + P P TLFV LP D + REV+ +FR G+ +RL++KE + P
Sbjct: 236 GGHINSPPCP-----TLFVSNLPKDVTEREVSILFRFMAGFVGIRLINKEGKLP------ 284
Query: 179 LCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGAR 223
+CF DFV AA A+D LQG+R D D S + ++F R R
Sbjct: 285 MCFCDFVDSQSAAMALDFLQGFRMDPKDISS-SISIEFDRANNKR 328
>gi|328875060|gb|EGG23425.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 302
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 125 VPLPP----DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
VP PP D STLFV LP D + RE++ +FR G+ RLV +E ++P +C
Sbjct: 203 VPPPPGQFKDPQSTLFVSNLPKDVTERELSILFRFMRGFISCRLVIREGKYP------IC 256
Query: 181 FVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
F DF A AM+ LQGYR D +D S + ++F R
Sbjct: 257 FCDFRDIPSAIMAMEILQGYRMDPNDVSS-SISIEFDR 293
>gi|284795211|ref|NP_001165323.1| RNA binding protein with multiple splicing [Xenopus (Silurana)
tropicalis]
Length = 195
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
G + E+ LP + TLFV GLP D RE+ +FRPF GY E L+ S+ P G
Sbjct: 10 GSQDEISLPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG----- 63
Query: 180 CFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
FV F S + A A +AL G RFD + LRL+FA+
Sbjct: 64 -FVSFDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 99
>gi|281211458|gb|EFA85620.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 355
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
DA STLFV LP D + RE++ +FR G+ VRLV +E ++P +CF DF
Sbjct: 268 DACSTLFVSNLPKDVTERELSILFRFMRGFINVRLVQREGKYP------ICFCDFRDTLS 321
Query: 190 AATAMDALQGYRFDEHD 206
AA AM+ L G++ D D
Sbjct: 322 AAGAMEMLNGFKMDTKD 338
>gi|224049139|ref|XP_002196184.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 195
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GG ++ LP + TLFV GLP D RE+ +FRPF GY E L+ S+ P G
Sbjct: 10 GGPADTSLPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG----- 63
Query: 180 CFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
FV F S + A A +AL G RFD + LRL+FA+
Sbjct: 64 -FVSFDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 99
>gi|402874657|ref|XP_003901146.1| PREDICTED: uncharacterized protein LOC101014530 [Papio anubis]
Length = 427
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
G S VPL + TLFV GLP D RE+ +FRPF GY E L+ +R P G
Sbjct: 237 GASSLVPLKKEVR-TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG----- 289
Query: 180 CFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
FV F S A A A +AL G RFD + + LRL+FA+
Sbjct: 290 -FVIFDSRAGAEAAKNALNGIRFDPENPQT--LRLEFAK 325
>gi|45382377|ref|NP_990200.1| RNA-binding protein with multiple splicing [Gallus gallus]
gi|13124483|sp|Q9W6I1.1|RBPMS_CHICK RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4835860|gb|AAD30273.1|AF129933_1 RRM-type RNA-binding protein hermes [Gallus gallus]
Length = 200
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 112 KDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
KD GGG E + TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 6 KDTEHTNGGGNVE-----EEVRTLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 59
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
P G FV F S A A A +AL G RFD + + LRL+FA+
Sbjct: 60 PVG------FVTFDSRAGAEAAKNALNGIRFDPENPQT--LRLEFAK 98
>gi|147903173|ref|NP_001083477.1| RNA binding protein with multiple splicing [Xenopus laevis]
gi|38014401|gb|AAH60391.1| MGC68512 protein [Xenopus laevis]
Length = 200
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 124 EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVD 183
E+ LP + TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV
Sbjct: 14 EINLPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVS 66
Query: 184 FVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
F S + A A +AL G RFD + LRL+FA+
Sbjct: 67 FDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 99
>gi|166240105|ref|XP_646953.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|165988745|gb|EAL73083.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 356
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 14/85 (16%)
Query: 127 LPPDAS--------STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
LPP +S STLFV LP D + RE++ +FR G+ +RL++KE + P
Sbjct: 258 LPPQSSISTTGMPCSTLFVSNLPKDVTERELSILFRFMRGFVGIRLINKEGKLP------ 311
Query: 179 LCFVDFVSPAHAATAMDALQGYRFD 203
+CF DF+ + A++ LQG+R D
Sbjct: 312 MCFCDFIDTQSSMFALEFLQGFRMD 336
>gi|426234121|ref|XP_004011049.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Ovis
aries]
Length = 270
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 93 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 145
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 146 KNALNGIRFDPENPQT--LRLEFAK 168
>gi|350578519|ref|XP_003121510.3| PREDICTED: RNA-binding protein with multiple splicing 2-like [Sus
scrofa]
Length = 327
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 149 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 201
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 202 KNALNGIRFDPENPQT--LRLEFAK 224
>gi|348588625|ref|XP_003480065.1| PREDICTED: RNA-binding protein with multiple splicing 2-like [Cavia
porcellus]
Length = 295
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 120 TLFVSGLPMDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEVA 172
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 173 KNALNGIRFDPENPQT--LRLEFAK 195
>gi|301756893|ref|XP_002914317.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Ailuropoda melanoleuca]
Length = 296
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 118 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 170
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 171 KNALNGIRFDPENPQT--LRLEFAK 193
>gi|281347320|gb|EFB22904.1| hypothetical protein PANDA_002166 [Ailuropoda melanoleuca]
Length = 163
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 56
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 57 KNALNGIRFDPENPQT--LRLEFAK 79
>gi|194670736|ref|XP_596374.4| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|297479609|ref|XP_002690918.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|296483268|tpg|DAA25383.1| TPA: RNA binding protein with multiple splicing 2-like [Bos taurus]
Length = 188
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 11 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 63
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 64 KNALNGIRFDPENPQT--LRLEFAK 86
>gi|345795064|ref|XP_853385.2| PREDICTED: RNA-binding protein with multiple splicing 2 [Canis
lupus familiaris]
Length = 214
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 36 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 88
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 89 KNALNGIRFDPENPQT--LRLEFAK 111
>gi|440907032|gb|ELR57225.1| RNA-binding protein with multiple splicing 2, partial [Bos
grunniens mutus]
Length = 184
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 7 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 59
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 60 KNALNGIRFDPENPQT--LRLEFAK 82
>gi|119583856|gb|EAW63452.1| hCG14793, isoform CRA_b [Homo sapiens]
Length = 143
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
SE L + TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV
Sbjct: 14 SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FV 66
Query: 183 DFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
F S + A A +AL G RFD + LRL+FA+
Sbjct: 67 SFDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 100
>gi|26347873|dbj|BAC37585.1| unnamed protein product [Mus musculus]
Length = 170
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 119 GGGR-------SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GGG+ SE L + TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
P G FV F S + A A +AL G RFD + LRL+FA+
Sbjct: 62 PVG------FVSFDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 100
>gi|41053746|ref|NP_956553.1| RNA binding protein with multiple splicing 2b [Danio rerio]
gi|29124508|gb|AAH48876.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|42542540|gb|AAH66414.1| Rbpms2 protein [Danio rerio]
gi|45126693|dbj|BAD12195.1| RNA binding protein [Danio rerio]
Length = 200
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP+D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 21 TLFVSGLPTDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRSGAEAA 73
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 74 KNALNGVRFDPENPQT--LRLEFAK 96
>gi|444730929|gb|ELW71298.1| RNA-binding protein with multiple splicing 2 [Tupaia chinensis]
Length = 240
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 27 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 79
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 80 KNALNGIRFDPENPQT--LRLEFAK 102
>gi|326926326|ref|XP_003209353.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 204
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S A A A
Sbjct: 27 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRAGAEAA 79
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 80 KNALNGIRFDPENPQT--LRLEFAK 102
>gi|31980694|ref|NP_082306.2| RNA-binding protein with multiple splicing 2 [Mus musculus]
gi|81915124|sp|Q8VC52.1|RBPS2_MOUSE RecName: Full=RNA-binding protein with multiple splicing 2
gi|18255713|gb|AAH21788.1| RNA binding protein with multiple splicing 2 [Mus musculus]
gi|74140118|dbj|BAE33785.1| unnamed protein product [Mus musculus]
gi|74194800|dbj|BAE25995.1| unnamed protein product [Mus musculus]
gi|148694156|gb|EDL26103.1| RNA binding protein with multiple splicing 2 [Mus musculus]
Length = 206
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 26 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 78
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 79 KNALNGIRFDPENPQT--LRLEFAK 101
>gi|351695575|gb|EHA98493.1| RNA-binding protein with multiple splicing 2, partial
[Heterocephalus glaber]
Length = 180
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 56
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 57 KNALNGIRFDPENPQT--LRLEFAK 79
>gi|290651751|ref|NP_001166897.1| RNA binding protein with multiple splicing 2 [Rattus norvegicus]
gi|197246487|gb|AAI69038.1| Rbpms2 protein [Rattus norvegicus]
Length = 210
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 84
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 85 KNALNGIRFDPENPQT--LRLEFAK 107
>gi|395502670|ref|XP_003755700.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Sarcophilus harrisii]
Length = 207
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S A A A
Sbjct: 30 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRAGAEAA 82
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 83 KNALNGIRFDPENPQT--LRLEFAK 105
>gi|449273343|gb|EMC82847.1| RNA-binding protein with multiple splicing, partial [Columba livia]
Length = 180
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S A A A
Sbjct: 3 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRAGAEAA 55
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 56 KNALNGIRFDPENPQT--LRLEFAK 78
>gi|224062243|ref|XP_002193531.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 167
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S A A A
Sbjct: 5 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRAGAEAA 57
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 58 KNALNGIRFDPENPQT--LRLEFAK 80
>gi|293342475|ref|XP_001059526.2| PREDICTED: uncharacterized protein LOC498642 isoform 2 [Rattus
norvegicus]
Length = 197
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 119 GGGR-------SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GGG+ SE L + TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
P G FV F S + A A +AL G RFD + LRL+FA+
Sbjct: 62 PVG------FVSFDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 100
>gi|344293499|ref|XP_003418460.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Loxodonta africana]
Length = 183
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 7 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 59
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 60 KNALNGIRFDPENPQT--LRLEFAK 82
>gi|390468449|ref|XP_002753282.2| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Callithrix jacchus]
Length = 255
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 78 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 130
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 131 KNALNGIRFDPENPQT--LRLEFAK 153
>gi|33342267|ref|NP_062707.1| RNA-binding protein with multiple splicing isoform 1 [Mus musculus]
gi|111185961|ref|NP_001036139.1| RNA-binding protein with multiple splicing isoform 2 [Mus musculus]
gi|20988889|gb|AAH30397.1| RNA binding protein gene with multiple splicing [Mus musculus]
gi|26334219|dbj|BAC30827.1| unnamed protein product [Mus musculus]
Length = 197
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 119 GGGR-------SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GGG+ SE L + TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
P G FV F S + A A +AL G RFD + LRL+FA+
Sbjct: 62 PVG------FVSFDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 100
>gi|281205884|gb|EFA80073.1| hypothetical protein PPL_06895 [Polysphondylium pallidum PN500]
Length = 639
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
DA++TLF LP D + RE++ +FR G+ VRLV ++ ++P +CF DF
Sbjct: 551 DANTTLFFSNLPKDVTERELSILFRFMRGFLNVRLVQRDGKYP------ICFCDFRGVPS 604
Query: 190 AATAMDALQGYRFDEHDRDS 209
AA AM+ L G++ D D S
Sbjct: 605 AAIAMEMLNGFKMDPKDTSS 624
>gi|291402858|ref|XP_002718127.1| PREDICTED: RNA binding protein with multiple splicing 2
[Oryctolagus cuniculus]
Length = 210
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 84
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 85 KNALNGIRFDPENPQT--LRLEFAK 107
>gi|126277363|ref|XP_001375205.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Monodelphis domestica]
Length = 257
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S A A A
Sbjct: 34 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRAGAEAA 86
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 87 KNALNGIRFDPENPQT--LRLEFAK 109
>gi|338717427|ref|XP_001496966.3| PREDICTED: RNA-binding protein with multiple splicing 2 [Equus
caballus]
Length = 287
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 109 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 161
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 162 KNALNGIRFDPENPQT--LRLEFAK 184
>gi|410961120|ref|XP_003987133.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Felis
catus]
Length = 204
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 26 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 78
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 79 KNALNGIRFDPENPQT--LRLEFAK 101
>gi|12845642|dbj|BAB26834.1| unnamed protein product [Mus musculus]
Length = 168
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 26 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 78
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 79 KNALNGIRFDPENPQT--LRLEFAK 101
>gi|397515721|ref|XP_003828094.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
paniscus]
Length = 230
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A
Sbjct: 50 AVRTLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGA 102
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A +AL G RFD + + LRL+FA+
Sbjct: 103 EAAKNALNGIRFDPENPQT--LRLEFAK 128
>gi|327279916|ref|XP_003224701.1| PREDICTED: RNA-binding protein with multiple splicing-like [Anolis
carolinensis]
Length = 255
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 52/99 (52%), Gaps = 15/99 (15%)
Query: 126 PLPPDAS------STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
P PP+ S TLFV GLP D RE+ +FRPF GY E L+ S+ P G
Sbjct: 69 PTPPEPSLTEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG----- 122
Query: 180 CFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
FV F S + A A +AL G RFD + LRL+FA+
Sbjct: 123 -FVSFDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 158
>gi|301619063|ref|XP_002938921.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 199
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A A
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRAGAEAA 73
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 74 KNALNGIRFDPENPQT--LRLEFAK 96
>gi|354504963|ref|XP_003514542.1| PREDICTED: RNA-binding protein with multiple splicing 2-like,
partial [Cricetulus griseus]
Length = 181
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 3 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 55
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 56 KNALNGIRFDPDNPQT--LRLEFAK 78
>gi|426379407|ref|XP_004056389.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Gorilla
gorilla gorilla]
Length = 214
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 37 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 89
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 90 KNALNGIRFDPENPQT--LRLEFAK 112
>gi|327285368|ref|XP_003227406.1| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Anolis carolinensis]
Length = 194
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 3 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRSGAEAA 55
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 56 KNALNGIRFDPENPQT--LRLEFAK 78
>gi|431895918|gb|ELK05336.1| Ornithine decarboxylase antizyme 2, partial [Pteropus alecto]
Length = 320
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 5 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 57
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 58 KNALNGIRFDPENPQT--LRLEFAK 80
>gi|301619061|ref|XP_002938920.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 198
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A A
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRAGAEAA 73
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 74 KNALNGIRFDPENPQT--LRLEFAK 96
>gi|148222884|ref|NP_001087735.1| RNA binding protein with multiple splicing 2 [Xenopus laevis]
gi|51703926|gb|AAH81153.1| MGC84222 protein [Xenopus laevis]
Length = 197
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A A
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRAGAEAA 73
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 74 KNALNGIRFDPENPQT--LRLEFAK 96
>gi|194226464|ref|XP_001915758.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Equus caballus]
gi|350593440|ref|XP_003483688.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Sus scrofa]
gi|410956133|ref|XP_003984699.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Felis catus]
Length = 196
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|355692793|gb|EHH27396.1| RNA-binding protein with multiple splicing 2, partial [Macaca
mulatta]
Length = 181
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 56
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 57 KNALNGIRFDPENPQT--LRLEFAK 79
>gi|348553688|ref|XP_003462658.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Cavia porcellus]
Length = 196
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|5803141|ref|NP_006858.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|57164969|ref|NP_001008710.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|291386102|ref|XP_002709595.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Oryctolagus cuniculus]
gi|395850272|ref|XP_003797718.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Otolemur garnettii]
gi|13124469|sp|Q93062.1|RBPMS_HUMAN RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|1669547|dbj|BAA12225.1| RBP-MS/type 1 [Homo sapiens]
gi|1669553|dbj|BAA12228.1| RBP-MS/type 4 [Homo sapiens]
gi|119583855|gb|EAW63451.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|119583857|gb|EAW63453.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|383415403|gb|AFH30915.1| RNA-binding protein with multiple splicing isoform A [Macaca
mulatta]
gi|410212520|gb|JAA03479.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253370|gb|JAA14652.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294226|gb|JAA25713.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342393|gb|JAA40143.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 196
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|413953214|gb|AFW85863.1| nucleic acid binding protein [Zea mays]
Length = 248
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 29/117 (24%)
Query: 77 SGGQSARHMSGGMPSRPVDDPRIVGIGGMDP----GPSAKDRALGLGGGRSEV------- 125
+GG +AR SG + +DP + G+ G+ P GP A L + G S V
Sbjct: 120 TGGATARG-SGAL-----EDPSLAGLSGLAPARALGPRALKEELDVVGRSSSVGRGASIP 173
Query: 126 ------PLP------PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
+P + S+ LFV+ LP+DC+RREVAH+FR F G+K++R+V KE R
Sbjct: 174 DVEHHSSIPNFDGPSENESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPR 230
>gi|355778103|gb|EHH63139.1| RNA-binding protein with multiple splicing 2, partial [Macaca
fascicularis]
Length = 181
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 56
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 57 KNALNGIRFDPENPQT--LRLEFAK 79
>gi|114657607|ref|XP_001174270.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
troglodytes]
Length = 209
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 84
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 85 KNALNGIRFDPENPQT--LRLEFAK 107
>gi|34915990|ref|NP_919248.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|74762401|sp|Q6ZRY4.1|RBPS2_HUMAN RecName: Full=RNA-binding protein with multiple splicing 2
gi|34485858|gb|AAQ73311.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|34534977|dbj|BAC87172.1| unnamed protein product [Homo sapiens]
gi|119598099|gb|EAW77693.1| RNA binding protein with multiple splicing 2 [Homo sapiens]
gi|225000786|gb|AAI72373.1| RNA binding protein with multiple splicing 2 [synthetic construct]
gi|261861060|dbj|BAI47052.1| RNA binding protein with multiple splicing 2 [synthetic construct]
Length = 209
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 84
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 85 KNALNGIRFDPENPQT--LRLEFAK 107
>gi|111185959|ref|NP_001036140.1| RNA-binding protein with multiple splicing isoform 3 [Mus musculus]
gi|403420640|ref|NP_001258173.1| RNA-binding protein with multiple splicing [Rattus norvegicus]
gi|12848898|dbj|BAB28128.1| unnamed protein product [Mus musculus]
gi|12849426|dbj|BAB28336.1| unnamed protein product [Mus musculus]
Length = 220
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 119 GGGR-------SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GGG+ SE L + TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
P G FV F S + A A +AL G RFD + LRL+FA+
Sbjct: 62 PVG------FVSFDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 100
>gi|344281668|ref|XP_003412600.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Loxodonta africana]
Length = 196
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|301770903|ref|XP_002920867.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Ailuropoda melanoleuca]
Length = 195
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 24 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 76
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 77 KNALNGIRFDPEIPQT--LRLEFAK 99
>gi|387540910|gb|AFJ71082.1| RNA-binding protein with multiple splicing 2 [Macaca mulatta]
Length = 209
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 84
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 85 KNALNGIRFDPENPQT--LRLEFAK 107
>gi|363733276|ref|XP_426296.3| PREDICTED: RNA-binding protein with multiple splicing [Gallus
gallus]
Length = 186
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 15 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 67
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 68 KNALNGIRFDPEIPQT--LRLEFAK 90
>gi|119583863|gb|EAW63459.1| hCG2043421, isoform CRA_b [Homo sapiens]
gi|119583865|gb|EAW63461.1| hCG2043421, isoform CRA_b [Homo sapiens]
Length = 179
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|403300512|ref|XP_003940978.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Saimiri
boliviensis boliviensis]
Length = 238
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 61 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 113
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 114 KNALNGIRFDPENPQT--LRLEFAK 136
>gi|397521591|ref|XP_003830876.1| PREDICTED: RNA-binding protein with multiple splicing [Pan
paniscus]
Length = 218
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 57/118 (48%), Gaps = 25/118 (21%)
Query: 117 GLGGGRSEVPLPPDASS----------------TLFVEGLPSDCSRREVAHIFRPFVGYK 160
G GG R V L P AS+ TLFV GLP D RE+ +FRPF GY
Sbjct: 31 GEGGSRERVFLCPRASAGPKLRNSKDFSETFVRTLFVSGLPLDIKPRELYLLFRPFKGY- 89
Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
E L+ S+ P G FV F S + A A +AL G RFD + LRL+FA+
Sbjct: 90 EGSLIKLTSKQPVG------FVSFDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 139
>gi|410912397|ref|XP_003969676.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 259
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 91 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRSGAEAA 143
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 144 KNALNGIRFDPENPQT--LRLEFAK 166
>gi|13124485|sp|Q9WVB0.1|RBPMS_MOUSE RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|5081739|gb|AAD39515.1|AF148511_1 hermes [Mus musculus]
Length = 197
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 119 GGGR-------SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GGG+ SE L + TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
P G FV F S + A A +AL G RFD + LR++FA+
Sbjct: 62 PVG------FVSFDSRSEAEAAKNALNGIRFDPEIPQT--LRIEFAK 100
>gi|395822321|ref|XP_003784468.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Otolemur
garnettii]
Length = 211
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 34 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 86
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 87 KNALNGIRFDPENPQT--LRLEFAK 109
>gi|345314045|ref|XP_001507449.2| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Ornithorhynchus anatinus]
Length = 123
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A A
Sbjct: 3 TLFVSGLPMDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRAGAEAA 55
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 56 KNALNGIRFDPENPQT--LRLEFAK 78
>gi|355715882|gb|AES05433.1| RNA binding protein with multiple splicing [Mustela putorius furo]
Length = 173
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 3 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 55
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 56 KNALNGIRFDPEIPQT--LRLEFAK 78
>gi|57164971|ref|NP_001008711.1| RNA-binding protein with multiple splicing isoform B [Homo sapiens]
gi|1669549|dbj|BAA12226.1| RBP-MS/type 2 [Homo sapiens]
gi|119583858|gb|EAW63454.1| hCG14793, isoform CRA_c [Homo sapiens]
Length = 204
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|148223487|ref|NP_001081864.1| RNA-binding protein with multiple splicing [Xenopus laevis]
gi|13124486|sp|Q9YGP5.1|RBPMS_XENLA RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4324639|gb|AAD16971.1| RRM-type RNA-binding protein hermes [Xenopus laevis]
gi|66912013|gb|AAH97507.1| LOC398092 protein [Xenopus laevis]
Length = 196
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A A
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRAGAEAA 73
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 74 KNALNGIRFDPENPQT--LRLEFAK 96
>gi|432092246|gb|ELK24870.1| RNA-binding protein with multiple splicing 2 [Myotis davidii]
Length = 315
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 27 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 79
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 80 KNALNGIRFDPENPQT--LRLEFAK 102
>gi|395541849|ref|XP_003772849.1| PREDICTED: RNA-binding protein with multiple splicing [Sarcophilus
harrisii]
Length = 188
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 17 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 69
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 70 KNALNGIRFDPEIPQT--LRLEFAK 92
>gi|332235691|ref|XP_003267039.1| PREDICTED: RNA-binding protein with multiple splicing 2, partial
[Nomascus leucogenys]
Length = 214
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 37 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 89
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + + LRL+FA+
Sbjct: 90 KNALNGIRFDPENPQT--LRLEFAK 112
>gi|126330763|ref|XP_001372734.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Monodelphis domestica]
Length = 186
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 15 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 67
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 68 KNALNGIRFDPEIPQT--LRLEFAK 90
>gi|410925168|ref|XP_003976053.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 194
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 24 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 76
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 77 KNALNGVRFDPEIPQT--LRLEFAK 99
>gi|313232434|emb|CBY24102.1| unnamed protein product [Oikopleura dioica]
Length = 300
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI--LCFVDFVSP 187
D TLFV GLPSD +RE+ +FRP+ G++ V K + PG I + FV F S
Sbjct: 60 DEVRTLFVSGLPSDVKQRELRLLFRPYKGFESA--VLKFPQKPGKVYPIAPVAFVTFKSK 117
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A + LQG +FD + + LRL+FA+
Sbjct: 118 AEAQVPKEELQGEKFD--NDNPTTLRLEFAK 146
>gi|431902282|gb|ELK08783.1| RNA-binding protein with multiple splicing [Pteropus alecto]
Length = 275
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 81 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 133
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 134 KNALNGIRFDPEIPQT--LRLEFAK 156
>gi|402877940|ref|XP_003902666.1| PREDICTED: RNA-binding protein with multiple splicing, partial
[Papio anubis]
Length = 268
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 56/110 (50%), Gaps = 19/110 (17%)
Query: 119 GGGRSEVP-LPPDASS---------TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
GGG SE P L P S TLFV GLP D RE+ +FRPF GY E L+
Sbjct: 49 GGGPSESPGLEPAVRSPRVLRATVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLT 107
Query: 169 SRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
S+ P G FV F S + A A +AL G RFD + LRL+FA+
Sbjct: 108 SKQPVG------FVSFDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 149
>gi|395850274|ref|XP_003797719.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Otolemur garnettii]
Length = 242
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
SE L + TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV
Sbjct: 14 SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FV 66
Query: 183 DFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
F S + A A +AL G RFD + LRL+FA+
Sbjct: 67 SFDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 100
>gi|50539886|ref|NP_001002409.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|166158150|ref|NP_001107477.1| uncharacterized protein LOC100135328 [Xenopus (Silurana)
tropicalis]
gi|49902931|gb|AAH76171.1| Zgc:92689 [Danio rerio]
gi|156230446|gb|AAI52179.1| Zgc:92689 [Danio rerio]
gi|163915769|gb|AAI57627.1| LOC100135328 protein [Xenopus (Silurana) tropicalis]
Length = 199
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 21 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRSGAEAA 73
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 74 KNALNGIRFDPESPQT--LRLEFAK 96
>gi|354474967|ref|XP_003499701.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Cricetulus griseus]
Length = 181
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 9 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 61
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 62 KNALNGIRFDPEIPQT--LRLEFAK 84
>gi|119583864|gb|EAW63460.1| hCG2043421, isoform CRA_c [Homo sapiens]
gi|194389216|dbj|BAG65596.1| unnamed protein product [Homo sapiens]
Length = 224
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
SE L + TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV
Sbjct: 14 SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FV 66
Query: 183 DFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
F S + A A +AL G RFD + LRL+FA+
Sbjct: 67 SFDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 100
>gi|348526652|ref|XP_003450833.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 199
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 21 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRSGAEAA 73
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 74 KNALNGIRFDPESPQT--LRLEFAK 96
>gi|417397319|gb|JAA45693.1| Putative rna-binding protein with multiple splicing-like isoform 2
equus caballus [Desmodus rotundus]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|338720949|ref|XP_003364277.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Equus caballus]
gi|350593442|ref|XP_003133441.3| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Sus scrofa]
gi|410956131|ref|XP_003984698.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Felis catus]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|326918450|ref|XP_003205501.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 233
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 62 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 114
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 115 KNALNGIRFDPEIPQT--LRLEFAK 137
>gi|148703476|gb|EDL35423.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
gi|148703477|gb|EDL35424.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
Length = 175
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 3 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 55
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 56 KNALNGIRFDPEIPQT--LRLEFAK 78
>gi|296472388|tpg|DAA14503.1| TPA: RNA-binding protein with multiple splicing [Bos taurus]
gi|440895026|gb|ELR47324.1| RNA-binding protein with multiple splicing [Bos grunniens mutus]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|348553686|ref|XP_003462657.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Cavia porcellus]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|344281670|ref|XP_003412601.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Loxodonta africana]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|57164973|ref|NP_001008712.1| RNA-binding protein with multiple splicing isoform C [Homo sapiens]
gi|332825789|ref|XP_001167950.2| PREDICTED: RNA-binding protein with multiple splicing [Pan
troglodytes]
gi|345781578|ref|XP_532815.3| PREDICTED: RNA-binding protein with multiple splicing [Canis lupus
familiaris]
gi|395739552|ref|XP_002819013.2| PREDICTED: RNA-binding protein with multiple splicing [Pongo
abelii]
gi|1669551|dbj|BAA12227.1| RBP-MS/type 3 [Homo sapiens]
gi|13177644|gb|AAH03608.1| RNA binding protein with multiple splicing [Homo sapiens]
gi|119583866|gb|EAW63462.1| hCG2043421, isoform CRA_d [Homo sapiens]
gi|261858762|dbj|BAI45903.1| RNA binding protein with multiple splicing [synthetic construct]
gi|383415405|gb|AFH30916.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|387541276|gb|AFJ71265.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|410212518|gb|JAA03478.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410212522|gb|JAA03480.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253368|gb|JAA14651.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253372|gb|JAA14653.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294224|gb|JAA25712.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294228|gb|JAA25714.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342391|gb|JAA40142.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342395|gb|JAA40144.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|114052324|ref|NP_001040000.1| RNA-binding protein with multiple splicing [Bos taurus]
gi|86438185|gb|AAI12765.1| RNA binding protein with multiple splicing [Bos taurus]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|297299182|ref|XP_002805345.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Macaca mulatta]
gi|297299184|ref|XP_001083170.2| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Macaca mulatta]
Length = 224
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
SE L + TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV
Sbjct: 14 SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FV 66
Query: 183 DFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
F S + A A +AL G RFD + LRL+FA+
Sbjct: 67 SFDSRSEAEAAKNALNGIRFDPEIPQT--LRLEFAK 100
>gi|403294314|ref|XP_003938139.1| PREDICTED: RNA-binding protein with multiple splicing [Saimiri
boliviensis boliviensis]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|390473655|ref|XP_002756964.2| PREDICTED: RNA-binding protein with multiple splicing [Callithrix
jacchus]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|332240824|ref|XP_003269587.1| PREDICTED: RNA-binding protein with multiple splicing [Nomascus
leucogenys]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|62203475|gb|AAH92476.1| RNA binding protein with multiple splicing [Homo sapiens]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|291386104|ref|XP_002709596.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Oryctolagus cuniculus]
Length = 219
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 78 KNALNGIRFDPEIPQT--LRLEFAK 100
>gi|348525747|ref|XP_003450383.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 194
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 24 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 76
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 77 KNALNGVRFDPEIPQT--LRLEFAK 99
>gi|432919028|ref|XP_004079709.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 194
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 24 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 76
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 77 KNALNGVRFDPEIPQT--LRLEFAK 99
>gi|119583862|gb|EAW63458.1| hCG2043421, isoform CRA_a [Homo sapiens]
Length = 200
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 6 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 58
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 59 KNALNGIRFDPEIPQT--LRLEFAK 81
>gi|426256354|ref|XP_004021805.1| PREDICTED: RNA-binding protein with multiple splicing [Ovis aries]
Length = 198
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 4 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 56
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 57 KNALNGIRFDPEIPQT--LRLEFAK 79
>gi|281347421|gb|EFB23005.1| hypothetical protein PANDA_009679 [Ailuropoda melanoleuca]
gi|351701272|gb|EHB04191.1| RNA-binding protein with multiple splicing, partial [Heterocephalus
glaber]
gi|355697845|gb|EHH28393.1| hypothetical protein EGK_18822, partial [Macaca mulatta]
gi|355779616|gb|EHH64092.1| hypothetical protein EGM_17218, partial [Macaca fascicularis]
Length = 198
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 4 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 56
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 57 KNALNGIRFDPEIPQT--LRLEFAK 79
>gi|313221526|emb|CBY32273.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI--LCFVDFVSP 187
D TLFV GLPSD +RE+ +FRP+ G++ V K + PG I + FV F S
Sbjct: 77 DEVRTLFVSGLPSDVKQRELRLLFRPYKGFESA--VLKFPQKPGKVYPIAPVAFVTFKSK 134
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A + LQG +FD + + LRL+FA+
Sbjct: 135 AEAQVPKEELQGEKFD--NDNPTTLRLEFAK 163
>gi|148703478|gb|EDL35425.1| RNA binding protein gene with multiple splicing, isoform CRA_b [Mus
musculus]
Length = 227
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 32 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 84
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 85 KNALNGIRFDPEIPQT--LRLEFAK 107
>gi|148703479|gb|EDL35426.1| RNA binding protein gene with multiple splicing, isoform CRA_c [Mus
musculus]
Length = 198
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 3 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 55
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 56 KNALNGIRFDPEIPQT--LRLEFAK 78
>gi|432851215|ref|XP_004066912.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 264
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 86 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRSGAEAA 138
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 139 KNALNGIRFDPESPQT--LRLEFAK 161
>gi|223648622|gb|ACN11069.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 200
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A
Sbjct: 22 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRTGAEAA 74
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 75 KNALNGIRFDPESPQT--LRLEFAK 97
>gi|198423670|ref|XP_002129832.1| PREDICTED: similar to MEChanosensory abnormality family member
(mec-8) [Ciona intestinalis]
Length = 359
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP+D +RE+ +FR F GY+ + + + PG P+ + FV F S A A
Sbjct: 83 TLFVSGLPADAKKRELYLLFRGFTGYEGS--IIRTTAKPGKAPVPVGFVTFDSRGEADLA 140
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
++LQG +FD + LRL+FA+
Sbjct: 141 KNSLQGIKFDPELPHT--LRLEFAK 163
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 17/129 (13%)
Query: 90 PSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREV 149
P P P I G + ALG G + +S L V + + +E+
Sbjct: 240 PIHPAQPPPHGAIFTHLAGAPMMNLALGQANGTTA------PTSCLLVCNIGGGTTEKEL 293
Query: 150 AHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDS 209
IF F GY +L+++ GG ++ V+F A+ A+ +LQG R + D
Sbjct: 294 KDIFSRFHGYVRAKLINR-----GG--MLCAVVEFTDAGTASYALHSLQGTRLN----DR 342
Query: 210 VKLRLQFAR 218
+R++FAR
Sbjct: 343 SAMRIEFAR 351
>gi|148529834|gb|ABQ82149.1| RNA binding protein with multiple splicing 2, partial [Equus
caballus]
Length = 177
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 136 FVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMD 195
FV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A +
Sbjct: 1 FVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAAKN 53
Query: 196 ALQGYRFDEHDRDSVKLRLQFAR 218
AL G RFD + + LRL+FA+
Sbjct: 54 ALNGIRFDPENPQT--LRLEFAK 74
>gi|328774045|gb|EGF84082.1| hypothetical protein BATDEDRAFT_84797 [Batrachochytrium
dendrobatidis JAM81]
Length = 262
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 13/96 (13%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
SE LPP+ S LF++ LP+D + ++ +F F G+KEVRLV PG + FV
Sbjct: 179 SEESLPPN--SILFIQNLPTDITNASLSALFNQFPGFKEVRLV------PGRSD--IAFV 228
Query: 183 DFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
++ + H+A A AL GYR + +++ FA+
Sbjct: 229 EYHNEMHSAIAKQALHGYRLLPEQEE---IKVTFAK 261
>gi|213513247|ref|NP_001133590.1| RNA-binding protein with multiple splicing [Salmo salar]
gi|209154600|gb|ACI33532.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 201
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A
Sbjct: 23 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRTGAEAA 75
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+AL G RFD + LRL+FA+
Sbjct: 76 KNALNGIRFDPECPQT--LRLEFAK 98
>gi|452823467|gb|EME30477.1| U2 small nuclear ribonucleoprotein B'' [Galdieria sulphuraria]
Length = 250
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
LF+ G+P DCS +++ +F F GYKE RL + + R + FV+F + A A
Sbjct: 177 VLFIAGIPQDCSLQQLESLFVQFPGYKETRLAAGQER--------VAFVEFETEDQATVA 228
Query: 194 MDALQGYRFDEHDRDSV 210
+ +QG+R E + S+
Sbjct: 229 LQGMQGFRISETSQLSI 245
>gi|303281170|ref|XP_003059877.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458532|gb|EEH55829.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 224
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 110 SAKDRALGLGGGRSEVPLPPDA--SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
+AK A GGG + + P A + LFV+GLP + ++ +F+ F G+KEVR+V
Sbjct: 125 AAKAEAEARGGGSAPIRTDPSAPPNEILFVQGLPEATTAAMLSMLFQQFPGFKEVRMVEA 184
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFD 203
+ PG + FV+F + A+ A+ LQG++ +
Sbjct: 185 K---PG-----IAFVEFTAETQASVALQGLQGFKIN 212
>gi|224068352|ref|XP_002302719.1| predicted protein [Populus trichocarpa]
gi|222844445|gb|EEE81992.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 13/91 (14%)
Query: 118 LGGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGG 174
LGG +S E P PP+ + LF++ LP++ + + +F+ + G+KEVR+V + PG
Sbjct: 162 LGGVKSMVPEAPAPPN--NILFIQNLPNETTTMMLQMLFQQYAGFKEVRMVETK---PG- 215
Query: 175 DPLILCFVDFVSPAHAATAMDALQGYRFDEH 205
+ FV++ + AM ALQG++ ++
Sbjct: 216 ----IAFVEYGDEMQSTVAMHALQGFKLQQN 242
>gi|326669776|ref|XP_003199078.1| PREDICTED: RNA-binding protein with multiple splicing-like [Danio
rerio]
Length = 183
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 22 TLFVSGLPMDIKPRELYLLFRPFQGY-EGSLIKFTSKQPVG------FVSFSSRSEAEAA 74
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+ L G RFD + LRL+FA+
Sbjct: 75 KNRLNGVRFDPDVPQT--LRLEFAK 97
>gi|260794824|ref|XP_002592407.1| hypothetical protein BRAFLDRAFT_118420 [Branchiostoma floridae]
gi|229277626|gb|EEN48418.1| hypothetical protein BRAFLDRAFT_118420 [Branchiostoma floridae]
Length = 1558
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D+ TLFV GLP D RE+ +FR + GY E L+ ++ P G FV F S A
Sbjct: 13 DSVRTLFVSGLPMDAKPRELYLLFRAYKGY-EGSLLKVTTKQPVG------FVTFESRAG 65
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A ALQG RFD + LRL+FA+
Sbjct: 66 AEAAKQALQGVRFDPDMPQT--LRLEFAK 92
Score = 43.9 bits (102), Expect = 0.055, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
Query: 155 PFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
PF G+ +RL +K GG P+ CF++F A AM+ALQGY DR LR+
Sbjct: 141 PFPGFSRLRLNNK-----GGSPV--CFIEFTDIPCATQAMNALQGYVLLSSDRGG--LRI 191
Query: 215 QFAR 218
++AR
Sbjct: 192 EYAR 195
>gi|324509983|gb|ADY44181.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKE--VRLVSK--ESRHPGGDPLILCFV 182
+PP TLFV GLP D RE+ +FR + GY+ +++ SK ++ P G FV
Sbjct: 25 VPPAQVRTLFVSGLPMDAKPRELYLLFRAYSGYESSLLKITSKNGKTASPVG------FV 78
Query: 183 DFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
F + A A A ALQG RFD + +++L L
Sbjct: 79 TFSTKAEADEARKALQGVRFDPDNAQTIRLEL 110
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV L + E+ +FR F G+ +R+ +K GG + FV+++ A AM
Sbjct: 258 LFVANLGQSVNEEELKQVFRSFPGFCRLRMHTK-----GGTS--VAFVEYLDVRQATQAM 310
Query: 195 DALQGYRFDEHDRDSVKLRLQFAR 218
+LQG++ +R +R+++A+
Sbjct: 311 TSLQGFQISSSERGG--MRIEYAK 332
>gi|324504525|gb|ADY41956.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKE--VRLVSK--ESRHPGGDPLILCFV 182
+PP TLFV GLP D RE+ +FR + GY+ +++ SK ++ P G FV
Sbjct: 25 VPPAQVRTLFVSGLPMDAKPRELYLLFRAYSGYESSLLKITSKNGKTASPVG------FV 78
Query: 183 DFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
F + A A A ALQG RFD + +++L L
Sbjct: 79 TFSTKAEADEARKALQGVRFDPDNAQTIRLEL 110
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV L + E+ +FR F G+ +R+ +K GG + FV+++ A AM
Sbjct: 258 LFVANLGQSVNEEELKQVFRSFPGFCRLRMHTK-----GGTS--VAFVEYLDVRQATQAM 310
Query: 195 DALQGYRFDEHDRDSVKLRLQFAR 218
+LQG++ +R +R+++A+
Sbjct: 311 TSLQGFQISSSERGG--MRIEYAK 332
>gi|390337886|ref|XP_794412.3| PREDICTED: protein couch potato-like [Strongylocentrotus
purpuratus]
Length = 124
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L K + PG + + FV F S A A A
Sbjct: 14 TLFVSGLPMDAKPRELYLLFRAYQGYEGSLL--KVTSKPGKNQSPVGFVTFESRAGAEAA 71
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
ALQG RFD ++ RL+FA+
Sbjct: 72 KQALQGVRFDPELPQTI--RLEFAK 94
>gi|255564206|ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
gi|223537662|gb|EEF39285.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
Length = 254
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 13/90 (14%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP+D + + +F+ + G+KEVR+V ES+ PG
Sbjct: 166 GGAKSMVPEAPAPPN--NILFIQNLPNDTTTMVLQMLFQHYAGFKEVRMV--ESK-PG-- 218
Query: 176 PLILCFVDFVSPAHAATAMDALQGYRFDEH 205
+ FV++ + AM LQG + ++
Sbjct: 219 ---IAFVEYADEMQSTVAMQGLQGLKIQQN 245
>gi|116791286|gb|ABK25922.1| unknown [Picea sitchensis]
Length = 345
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLF+ GLP D RE+ ++FR F GY+ +L + E G + F F
Sbjct: 80 DEVRTLFIAGLPDDVKHREIYNLFREFPGYRSCQLRNSE-----GGTQVYAFTVFTDQQS 134
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A AM AL G FD R + + L
Sbjct: 135 ALAAMHALNGMDFDPETRAVLYIDL 159
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 17/134 (12%)
Query: 103 GGMDPGPSAKDRALGLGGGRSEVPLPPDASS---TLFVEGLPSDCSRREVAHIFRPFVGY 159
GGM +D GL G+S P P ++ TLFV L CS E+ +F G+
Sbjct: 224 GGMMEASIFQDGVPGLTTGQSTAPTQPASNPPCPTLFVANLGPTCSEEELTQVFSRCPGF 283
Query: 160 KEVRL-VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
++++ + E L + FVDF + A++ LQ DR +RLQ+A+
Sbjct: 284 LKLKMQIIGE--------LPVAFVDFQEITSSTQALNHLQNAMLLSSDRGG--MRLQYAK 333
Query: 219 YPGARSGGGHRGKR 232
AR G RG++
Sbjct: 334 ---ARMGRPRRGRK 344
>gi|297834202|ref|XP_002884983.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
gi|297330823|gb|EFH61242.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
Length = 287
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
P A +TLFV GLP+D RE+ ++FR G++ +L ++ G ++ F F S
Sbjct: 33 PGAINTLFVSGLPNDVKAREIHNLFRRRYGFESCQL-----KYTGRGDQVVAFATFTSHR 87
Query: 189 HAATAMDALQGYRFDEHDRDSVKLRL 214
A AM+ L G +FD ++ + L
Sbjct: 88 FAMAAMNELNGVKFDPQTGSTLHIEL 113
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A STLF+ L +C+ E+ + + G+ +++ R GG P + F DF A
Sbjct: 203 ACSTLFIANLGPNCTEDELRQLLSRYSGFNILKI-----RARGGMP--VAFADFEEIEQA 255
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFAR 218
AM+ LQG DR + +++AR
Sbjct: 256 TDAMNELQGNLLSSSDRGG--MHIEYAR 281
>gi|119479645|ref|XP_001259851.1| RNA binding protein [Neosartorya fischeri NRRL 181]
gi|119408005|gb|EAW17954.1| RNA binding protein [Neosartorya fischeri NRRL 181]
Length = 616
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A A+
Sbjct: 407 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNG-------PMCFVEFDEVAMASK 459
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L GY+ ++ + RL F++ P G RSG
Sbjct: 460 ALNELYGYKLSNSNKTGI--RLSFSKNPLGVRSG 491
>gi|91086239|ref|XP_972538.1| PREDICTED: similar to Squamous cell carcinoma antigen recognized by
T-cells 3 (SART-3) (mSART-3) (Tumor-rejection antigen
SART3) [Tribolium castaneum]
Length = 758
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LFV+GLP D S+ E+ IFRPF G K VRLV + P G L +V+F A A
Sbjct: 627 TNKLFVKGLPYDKSQEEIEAIFRPF-GAKTVRLVCRRDGKPKG----LAYVEFEDDASAK 681
Query: 192 TAMDALQG 199
AM+ G
Sbjct: 682 KAMEKTDG 689
>gi|425774296|gb|EKV12605.1| RNA binding protein [Penicillium digitatum Pd1]
gi|425776297|gb|EKV14519.1| RNA binding protein [Penicillium digitatum PHI26]
Length = 518
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A A+
Sbjct: 308 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGP-------MCFVEFDEVAMASK 360
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A++ L GY+ +SVK +RL F++ P G RSG
Sbjct: 361 ALNELYGYKLS----NSVKTGIRLSFSKNPLGVRSG 392
>gi|270009865|gb|EFA06313.1| hypothetical protein TcasGA2_TC009182 [Tribolium castaneum]
Length = 748
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LFV+GLP D S+ E+ IFRPF G K VRLV + P G L +V+F A A
Sbjct: 617 TNKLFVKGLPYDKSQEEIEAIFRPF-GAKTVRLVCRRDGKPKG----LAYVEFEDDASAK 671
Query: 192 TAMDALQG 199
AM+ G
Sbjct: 672 KAMEKTDG 679
>gi|255949550|ref|XP_002565542.1| Pc22g16260 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592559|emb|CAP98914.1| Pc22g16260 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 602
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A A+
Sbjct: 391 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGP-------MCFVEFDEVAMASK 443
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A++ L GY+ +SVK +RL F++ P G RSG
Sbjct: 444 ALNELYGYKLS----NSVKTGIRLSFSKNPLGVRSG 475
>gi|70998148|ref|XP_753803.1| RNA binding protein [Aspergillus fumigatus Af293]
gi|66851439|gb|EAL91765.1| RNA binding protein [Aspergillus fumigatus Af293]
gi|159126462|gb|EDP51578.1| RNA binding protein [Aspergillus fumigatus A1163]
Length = 616
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A A+
Sbjct: 407 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNG-------PMCFVEFDEVAMASK 459
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L GY+ + + RL F++ P G RSG
Sbjct: 460 ALNELYGYKLSNSTKTGI--RLSFSKNPLGVRSG 491
>gi|121713206|ref|XP_001274214.1| RNA binding protein [Aspergillus clavatus NRRL 1]
gi|119402367|gb|EAW12788.1| RNA binding protein [Aspergillus clavatus NRRL 1]
Length = 616
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A A+
Sbjct: 407 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGP-------MCFVEFDEVAMASK 459
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A++ L GY+ +SVK +RL F++ P G RSG
Sbjct: 460 ALNELYGYKLS----NSVKTGIRLSFSKNPLGVRSG 491
>gi|426388779|ref|XP_004060810.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Gorilla
gorilla gorilla]
Length = 229
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 21/110 (19%)
Query: 114 RALGLGGGRSEVPLPPDASST-----LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
RAL L ++ P PP S LF+ LP + + ++ +F F G+KEVRLV
Sbjct: 135 RALVL----TDSPTPPQLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP-- 188
Query: 169 SRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
RH + FV+F + A A DALQG++ +++ +++ FA+
Sbjct: 189 GRHD------IAFVEFDNEVQAGAARDALQGFKITQNN----AMKISFAK 228
>gi|388501866|gb|AFK38999.1| unknown [Medicago truncatula]
Length = 234
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 11/88 (12%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G G E P ++ LF+E LP + + R + +F + G+KEVRL+ + PG
Sbjct: 149 GSGAQEAAAP---NNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAK---PG----- 197
Query: 179 LCFVDFVSPAHAATAMDALQGYRFDEHD 206
+ FVDF ++ AM ALQG++ +
Sbjct: 198 IAFVDFEDDGQSSMAMQALQGFKITPQN 225
>gi|255083026|ref|XP_002504499.1| predicted protein [Micromonas sp. RCC299]
gi|226519767|gb|ACO65757.1| predicted protein [Micromonas sp. RCC299]
Length = 224
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 11/93 (11%)
Query: 112 KDRALGLGGG-RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
+D A G+ R++ PP+ LFV+GLP + ++ +F+ F G+KEVR+V +
Sbjct: 130 RDAASGVTAKVRTDPSAPPN--EILFVQGLPGATTAAMLSMLFQQFPGFKEVRMVEAK-- 185
Query: 171 HPGGDPLILCFVDFVSPAHAATAMDALQGYRFD 203
PG + FV+F + A A+ A+ LQG++ +
Sbjct: 186 -PG-----IAFVEFETDAQASVALSGLQGFKIN 212
>gi|332855731|ref|XP_003316404.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 1 [Pan
troglodytes]
Length = 227
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 21/110 (19%)
Query: 114 RALGLGGGRSEVPLPPDASST-----LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
RAL L ++ P PP S LF+ LP + + ++ +F F G+KEVRLV
Sbjct: 133 RALVL----TDSPTPPQLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP-- 186
Query: 169 SRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
RH + FV+F + A A DALQG++ +++ +++ FA+
Sbjct: 187 GRHD------IAFVEFDNEVQAGAARDALQGFKITQNN----AMKISFAK 226
>gi|297824861|ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata]
gi|297326152|gb|EFH56572.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata]
Length = 249
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 117 GLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
G+ E P PP+ + LFV+ LP + + + +F + G+KEVR+V + PG
Sbjct: 162 GVKPNLPEAPAPPN--NILFVQNLPHETTPMVLQMLFYQYQGFKEVRMVEAK---PG--- 213
Query: 177 LILCFVDFVSPAHAATAMDALQGYRFDEHD 206
+ FV+F + AM LQG++ ++
Sbjct: 214 --IAFVEFADEMQSTVAMQGLQGFKIQQNQ 241
>gi|357491327|ref|XP_003615951.1| U1 small nuclear ribonucleoprotein A [Medicago truncatula]
gi|355517286|gb|AES98909.1| U1 small nuclear ribonucleoprotein A [Medicago truncatula]
gi|388501104|gb|AFK38618.1| unknown [Medicago truncatula]
Length = 233
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 11/88 (12%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G G E P ++ LF+E LP + + R + +F + G+KEVRL+ + PG
Sbjct: 148 GSGAQEAAAP---NNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAK---PG----- 196
Query: 179 LCFVDFVSPAHAATAMDALQGYRFDEHD 206
+ FVDF ++ AM ALQG++ +
Sbjct: 197 IAFVDFEDDGQSSMAMQALQGFKITPQN 224
>gi|186510039|ref|NP_001118622.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26449895|dbj|BAC42069.1| unknown protein [Arabidopsis thaliana]
gi|332641880|gb|AEE75401.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 287
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
P A +TLFV GLP+D RE+ ++FR G++ +L ++ G ++ F F S
Sbjct: 33 PGAINTLFVSGLPNDVKAREIHNLFRRRHGFESCQL-----KYTGRGDQVVAFATFTSHR 87
Query: 189 HAATAMDALQGYRFDEHDRDSVKLRL 214
A AM+ L G +FD ++ + L
Sbjct: 88 FALAAMNELNGVKFDPQTGSNLHIEL 113
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A STLF+ L +C+ E+ + + G+ +++ ++ GG P + F DF A
Sbjct: 203 ACSTLFIANLGPNCTEDELKQLLSRYPGFHILKIRAR-----GGMP--VAFADFEEIEQA 255
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFAR 218
AM+ LQG DR + +++AR
Sbjct: 256 TDAMNHLQGNLLSSSDRGG--MHIEYAR 281
>gi|390333482|ref|XP_789234.3| PREDICTED: U1 small nuclear ribonucleoprotein A-like
[Strongylocentrotus purpuratus]
Length = 235
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+P + ++ LF+ LP + + + +F+ F GYKEVRLV RH + FV+F +
Sbjct: 155 VPDEPNNILFLTNLPEETNELMLEVLFKQFNGYKEVRLVP--GRHD------IAFVEFAN 206
Query: 187 PAHAATAMDALQGYRF 202
+ TA DALQG++
Sbjct: 207 EQQSGTAKDALQGFKI 222
>gi|348683636|gb|EGZ23451.1| hypothetical protein PHYSODRAFT_484798 [Phytophthora sojae]
Length = 236
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LF+E LP C++ ++ +F+ + G+KEVR+V PG L FV+F A AA
Sbjct: 161 NKILFLEALPESCNKEMLSVLFKQYQGFKEVRMV------PGKKG--LAFVEFGDEAQAA 212
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFAR 218
A+ L G++ D L++ FA+
Sbjct: 213 IALQGLFGFKLTPTD----ALKVSFAK 235
>gi|359806644|ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycine max]
gi|255647802|gb|ACU24361.1| unknown [Glycine max]
Length = 232
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 108 GPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
GP+A R G G E P ++ LF+E LP + + R + +F + G+KEVRL+
Sbjct: 139 GPTASFRQ---GPGAQETAAP---NNILFIENLPHETTGRMLEMLFEQYPGFKEVRLIEA 192
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHD 206
+ PG + FVDF ++ AM AL G++ +
Sbjct: 193 K---PG-----IAFVDFEDEVQSSMAMQALHGFKITPQN 223
>gi|108707670|gb|ABF95465.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 231
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 17/106 (16%)
Query: 108 GPSAKDRALG-------LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
GP+A ++ G LG E P PP+ + LF++ LP++ + + +F+ + G++
Sbjct: 127 GPNAAAQSNGTGYQASRLGKTSQEPPAPPN--NILFIQNLPAETTSMMLQILFQQYPGFR 184
Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHD 206
EVR++ + PG + FV++ + + AM ALQG++ ++
Sbjct: 185 EVRMIEAK---PG-----IAFVEYEDDSQSMVAMQALQGFKITPYN 222
>gi|115452491|ref|NP_001049846.1| Os03g0298800 [Oryza sativa Japonica Group]
gi|122247158|sp|Q10MR0.1|RU2B_ORYSJ RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|108707669|gb|ABF95464.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548317|dbj|BAF11760.1| Os03g0298800 [Oryza sativa Japonica Group]
gi|215737098|dbj|BAG96027.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624757|gb|EEE58889.1| hypothetical protein OsJ_10509 [Oryza sativa Japonica Group]
Length = 232
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 17/106 (16%)
Query: 108 GPSAKDRALG-------LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
GP+A ++ G LG E P PP+ + LF++ LP++ + + +F+ + G++
Sbjct: 128 GPNAAAQSNGTGYQASRLGKTSQEPPAPPN--NILFIQNLPAETTSMMLQILFQQYPGFR 185
Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHD 206
EVR++ + PG + FV++ + + AM ALQG++ ++
Sbjct: 186 EVRMIEAK---PG-----IAFVEYEDDSQSMVAMQALQGFKITPYN 223
>gi|384950746|sp|B8AM21.1|RU2B_ORYSI RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|218192634|gb|EEC75061.1| hypothetical protein OsI_11177 [Oryza sativa Indica Group]
Length = 232
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 17/106 (16%)
Query: 108 GPSAKDRALG-------LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
GP+A ++ G LG E P PP+ + LF++ LP++ + + +F+ + G++
Sbjct: 128 GPNAAAQSNGTGYQASRLGKTSQEPPAPPN--NILFIQNLPAETTSMMLQILFQQYPGFR 185
Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHD 206
EVR++ + PG + FV++ + + AM ALQG++ ++
Sbjct: 186 EVRMIEAK---PG-----IAFVEYEDDSQSMVAMQALQGFKITPYN 223
>gi|212534592|ref|XP_002147452.1| RNA binding protein [Talaromyces marneffei ATCC 18224]
gi|210069851|gb|EEA23941.1| RNA binding protein [Talaromyces marneffei ATCC 18224]
Length = 591
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP+D E+ +F GYK + +K++ +CFV+F A A+
Sbjct: 385 NTLYVGNLPADTQEEELKALFSKQRGYKRLCFRNKQNGP-------MCFVEFDEVAMASK 437
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A++ L GY+ +SVK +RL F++ P G RSG
Sbjct: 438 ALNELYGYKLS----NSVKTGIRLSFSKNPLGVRSG 469
>gi|156402885|ref|XP_001639820.1| predicted protein [Nematostella vectensis]
gi|156226951|gb|EDO47757.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LF+ LP + + ++ +F F G+KEVRLV S + FV+F + A
Sbjct: 134 NNILFLTNLPMETTELMLSMLFNQFPGFKEVRLVPGRSD--------ISFVEFENEVQAG 185
Query: 192 TAMDALQGYRFDEHDRDSV 210
TA DALQG+R + S+
Sbjct: 186 TAKDALQGFRITPTNAMSI 204
>gi|256066562|ref|XP_002570569.1| hypothetical protein [Schistosoma mansoni]
gi|360043573|emb|CCD78986.1| hypothetical protein Smp_181270.2 [Schistosoma mansoni]
Length = 529
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR F GY L K + G + FV F S A A
Sbjct: 92 TLFVSGLPLDAKPRELYLLFRSFKGYLSSTL--KPAGKNGKLTAPVGFVTFESREQAEEA 149
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
M LQG +FD +RL+FAR
Sbjct: 150 MSKLQGVKFDPDGNQ--HMRLEFAR 172
>gi|358385005|gb|EHK22602.1| hypothetical protein TRIVIDRAFT_22864, partial [Trichoderma virens
Gv29-8]
Length = 437
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F P GYK + +K++ +CFV+F HA
Sbjct: 297 NTLYVGNLPIDTSEEELKALFSPVRGYKRLCFRTKQNGP-------MCFVEFEDIGHATK 349
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARS 224
A+ L G+ H+ +RL F++ P G RS
Sbjct: 350 ALSQLYGWCL--HNSVKGGIRLSFSKNPLGVRS 380
>gi|219121341|ref|XP_002185896.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582745|gb|ACI65366.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 226
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 13/82 (15%)
Query: 124 EVPLPPDA---SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
++P P D S L + LPSDC+ + +FR + GYKEVR+ PG L
Sbjct: 142 DMPSPQDTAPPSKYLLAQNLPSDCNEMMLGMLFRQYSGYKEVRMP-----RPG-----LA 191
Query: 181 FVDFVSPAHAATAMDALQGYRF 202
F++F HA A +AL G++
Sbjct: 192 FIEFEDEPHATLARNALNGFKL 213
>gi|15226631|ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]
gi|75319458|sp|Q39244.1|RU1A_ARATH RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|1050430|emb|CAA90283.1| U1snRNP-specific protein [Arabidopsis thaliana]
gi|2529669|gb|AAC62852.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|15450591|gb|AAK96567.1| At2g47580/T30B22.12 [Arabidopsis thaliana]
gi|16649011|gb|AAL24357.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|20259986|gb|AAM13340.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|22655484|gb|AAM98334.1| At2g47580/T30B22.12 [Arabidopsis thaliana]
gi|330255767|gb|AEC10861.1| spliceosomal protein U1A [Arabidopsis thaliana]
Length = 250
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 117 GLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
G+ E P PP+ + LFV+ LP + + + +F + G+KEVR++ + PG
Sbjct: 163 GMKPNMPEAPAPPN--NILFVQNLPHETTPMVLQMLFCQYQGFKEVRMIEAK---PG--- 214
Query: 177 LILCFVDFVSPAHAATAMDALQGYRFDEHD 206
+ FV+F + AM LQG++ ++
Sbjct: 215 --IAFVEFADEMQSTVAMQGLQGFKIQQNQ 242
>gi|242790607|ref|XP_002481586.1| RNA binding protein [Talaromyces stipitatus ATCC 10500]
gi|218718174|gb|EED17594.1| RNA binding protein [Talaromyces stipitatus ATCC 10500]
Length = 546
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP+D E+ +F GYK + +K++ +CFV+F A A+
Sbjct: 340 NTLYVGNLPADTQEEELKALFSKQRGYKRLCFRNKQNGP-------MCFVEFDEVAMASK 392
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A++ L GY+ +SVK +RL F++ P G RSG
Sbjct: 393 ALNELYGYKLS----NSVKTGIRLSFSKNPLGVRSG 424
>gi|225707030|gb|ACO09361.1| U2 small nuclear ribonucleoprotein B [Osmerus mordax]
Length = 219
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 142 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--ISFVEFESE 191
Query: 188 AHAATAMDALQGYRF 202
A A A DALQG+R
Sbjct: 192 ARAGVAKDALQGFRI 206
>gi|371874989|ref|NP_001243119.1| U2 small nuclear ribonucleoprotein B'' [Danio rerio]
Length = 220
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 143 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--ISFVEFESE 192
Query: 188 AHAATAMDALQGYR 201
A A A DALQG+R
Sbjct: 193 AQAGVAKDALQGFR 206
>gi|356541768|ref|XP_003539345.1| PREDICTED: uncharacterized protein LOC100780983 [Glycine max]
Length = 338
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ ++FR F GY+ L R P F F S A A
Sbjct: 80 TLFVAGLPEDVKPREIYNLFREFPGYESSHL-----RSPSNSSQPFAFAVFASQKSAILA 134
Query: 194 MDALQGYRFDEHDRDSVKLRL 214
M AL G FD ++ + L
Sbjct: 135 MHALNGLVFDLEKGSTLYIDL 155
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 110 SAKDRALGLGGGRSEVPLPPDASS---TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
SA +L +S P P S+ TLFV L C+ +E+ +F + G+ ++++ S
Sbjct: 224 SAMSDSLFANLKKSSTPYIPQNSTPCATLFVANLGPSCNEQELIQVFSRYPGFLKLKMQS 283
Query: 167 KESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVK-LRLQFAR 218
G P+ FVDF + A+++LQG H S + +RL++A+
Sbjct: 284 TY-----GAPV--AFVDFQDVGSSTDALNSLQGTIL--HSSQSGEGMRLEYAK 327
>gi|37748043|gb|AAH59527.1| Snrpb2 protein [Danio rerio]
Length = 229
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 152 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--ISFVEFESE 201
Query: 188 AHAATAMDALQGYR 201
A A A DALQG+R
Sbjct: 202 AQAGVAKDALQGFR 215
>gi|449484269|ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 242
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 124 EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVD 183
E P PP+ S LFV+ LP + + + +F + G+KEVR+V + PG + FV+
Sbjct: 161 EAPAPPN--SILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAK---PG-----IAFVE 210
Query: 184 FVSPAHAATAMDALQGYRFDEHD 206
+ + AM ALQG++ + +
Sbjct: 211 YSDEVQSTVAMQALQGFKMNPQN 233
>gi|395529330|ref|XP_003766769.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Sarcophilus
harrisii]
Length = 241
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 16/115 (13%)
Query: 104 GMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVR 163
GM P A L G SE P + LF+ LP + + ++ +F F G+KEVR
Sbjct: 142 GMPPMTQAPRIMHHLPGXLSENP----PNHILFLTNLPEETNELMLSMLFNQFPGFKEVR 197
Query: 164 LVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
LV RH + FV+F + A A DALQG++ +++ +++ FA+
Sbjct: 198 LVP--GRHD------IAFVEFDNEVQAGAARDALQGFKITQNN----AMKISFAK 240
>gi|392597982|gb|EIW87304.1| RNA binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 263
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP + + ++ +F + EVRL+ + + FV+FV
Sbjct: 185 LPPN--KILFLQNLPENVDKEQLTTLFTQYPNLHEVRLIPTKKD--------IAFVEFVD 234
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A A DAL Y+ D + K+++ FAR
Sbjct: 235 EASAGVAKDALHNYKLDGEN----KIKITFAR 262
>gi|358332433|dbj|GAA51094.1| protein couch potato, partial [Clonorchis sinensis]
Length = 413
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T+FV GLP D RE+ +FR F GY+ L K + G + FV F S A A
Sbjct: 83 TIFVSGLPLDAKPRELYLLFRGFKGYQSSTL--KPAGKNGKPTAPVGFVTFDSREQAEDA 140
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
M LQG +FD +RL+FAR
Sbjct: 141 MRKLQGVKFDPEGNQ--LMRLEFAR 163
>gi|449469074|ref|XP_004152246.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Cucumis sativus]
Length = 248
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 124 EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVD 183
E P PP+ S LFV+ LP + + + +F + G+KEVR+V + PG + FV+
Sbjct: 167 EAPAPPN--SILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAK---PG-----IAFVE 216
Query: 184 FVSPAHAATAMDALQGYRFDEHD 206
+ + AM ALQG++ + +
Sbjct: 217 YSDEVQSTVAMQALQGFKMNPQN 239
>gi|255647418|gb|ACU24174.1| unknown [Glycine max]
Length = 241
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 13/87 (14%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP+D + + +F + G+KEVR+V + PG
Sbjct: 152 GGAKSMVPEAPAPPN--NILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETK---PG-- 204
Query: 176 PLILCFVDFVSPAHAATAMDALQGYRF 202
+ FV++ + AM LQG++
Sbjct: 205 ---IAFVEYGDEMQSTVAMQTLQGFKI 228
>gi|356573171|ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Glycine max]
Length = 241
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 13/87 (14%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP+D + + +F + G+KEVR+V + PG
Sbjct: 152 GGAKSMVPEAPAPPN--NILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETK---PG-- 204
Query: 176 PLILCFVDFVSPAHAATAMDALQGYRF 202
+ FV++ + AM LQG++
Sbjct: 205 ---IAFVEYGDEMQSTVAMQTLQGFKI 228
>gi|116781538|gb|ABK22144.1| unknown [Picea sitchensis]
Length = 235
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
E P PP+ + LF++ LP + + + +F+ + G+KEVR++ + PG + FV
Sbjct: 153 QEPPAPPN--NILFIQNLPHETTTMMLQMLFQQYPGFKEVRMIEAK---PG-----IAFV 202
Query: 183 DFVSPAHAATAMDALQGYRFDEHD 206
++ A+ AM ALQG++ +
Sbjct: 203 EYGDEMQASVAMQALQGFKITPQN 226
>gi|224094288|ref|XP_002310126.1| predicted protein [Populus trichocarpa]
gi|222853029|gb|EEE90576.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+P D TLFV GLP D RE+ ++FR F GY+ L R P + F F
Sbjct: 67 VPHDQVRTLFVAGLPDDIKPREMYNLFREFPGYESSHL-----RTPSQNSQPFAFATFTD 121
Query: 187 PAHAATAMDALQGYRFD 203
A AM AL G FD
Sbjct: 122 QPSAVAAMHALNGMVFD 138
>gi|293333676|ref|NP_001169386.1| uncharacterized protein LOC100383254 [Zea mays]
gi|224029017|gb|ACN33584.1| unknown [Zea mays]
gi|414866361|tpg|DAA44918.1| TPA: hypothetical protein ZEAMMB73_448604 [Zea mays]
Length = 233
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 118 LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
LG E P PP+ + LF++ LP + + +F+ + G++EVR++ + PG
Sbjct: 146 LGKASQEPPAPPN--NILFIQNLPDQTTSMMLQILFQQYPGFREVRMIEAK---PG---- 196
Query: 178 ILCFVDFVSPAHAATAMDALQGYRF 202
+ FV+F + AM ALQG++
Sbjct: 197 -IAFVEFEDDGQSMVAMQALQGFKI 220
>gi|226531516|ref|NP_001149883.1| spliceosomal protein [Zea mays]
gi|194696844|gb|ACF82506.1| unknown [Zea mays]
gi|195635261|gb|ACG37099.1| spliceosomal protein [Zea mays]
gi|195659375|gb|ACG49155.1| spliceosomal protein [Zea mays]
gi|413956009|gb|AFW88658.1| Spliceosomal protein [Zea mays]
Length = 233
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 118 LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
LG E P PP+ + LF++ LP + + +F+ + G++EVR++ + PG
Sbjct: 146 LGKASQEPPAPPN--NILFIQNLPDQTTSMMLQILFQQYPGFREVRMIEAK---PG---- 196
Query: 178 ILCFVDFVSPAHAATAMDALQGYRF 202
+ FV+F + AM ALQG++
Sbjct: 197 -IAFVEFEDDGQSMVAMQALQGFKI 220
>gi|392570636|gb|EIW63808.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 281
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP + S+ ++ +F + EVRL+ + + FV+F+
Sbjct: 203 LPPN--KILFLQNLPKNVSKDQLMALFAQYPNLHEVRLIPTKKD--------IAFVEFLD 252
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A A DAL Y+ D + K+++ FAR
Sbjct: 253 EASATVAKDALHNYKLDGEN----KIKITFAR 280
>gi|317106697|dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]
Length = 316
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
P D TLFV GLP D RE+ ++FR F GY+ L R P F F+
Sbjct: 71 PHDPVRTLFVAGLPDDVKPREIYNLFREFPGYESSHL-----RSPTQTSQPFAFATFIDQ 125
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRL 214
A AM AL G FD ++ + L
Sbjct: 126 PSAVAAMHALNGMVFDLEKGSTLYIDL 152
>gi|217072842|gb|ACJ84781.1| unknown [Medicago truncatula]
Length = 245
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 13/87 (14%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP++ + + +F + G+KEVR+V + PG
Sbjct: 156 GGAKSLLPEAPAPPN--NILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVEAK---PG-- 208
Query: 176 PLILCFVDFVSPAHAATAMDALQGYRF 202
+ FV++ + AM ALQG++
Sbjct: 209 ---IAFVEYGDEMQSTMAMQALQGFKI 232
>gi|388497184|gb|AFK36658.1| unknown [Medicago truncatula]
Length = 232
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 13/87 (14%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP++ + + +F + G+KEVR+V + PG
Sbjct: 143 GGAKSLLPEAPAPPN--NILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVEAK---PG-- 195
Query: 176 PLILCFVDFVSPAHAATAMDALQGYRF 202
+ FV++ + AM ALQG++
Sbjct: 196 ---IAFVEYGDEMQSTMAMQALQGFKI 219
>gi|328854301|gb|EGG03434.1| hypothetical protein MELLADRAFT_109264 [Melampsora larici-populina
98AG31]
Length = 364
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 19/123 (15%)
Query: 100 VGIGGMDPGPSAKDRALGLGGGRSEVPLPPD---ASSTLFVEGLPSDCSRREVAHIFRPF 156
+ GG+ P SA A GR V +P + + LFV+ LP + + + +F+ +
Sbjct: 256 IAAGGVAPTTSAT--AASTNSGRRIVQMPDEYQPPNKILFVQNLPENAGKDALEVLFKQY 313
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFD-EHDRDSVKLRLQ 215
EVR + PG + FV++ + A DAL Y+FD EH K+++
Sbjct: 314 ANLVEVRTI------PGR--ATIAFVEYTDATSSGVAKDALHNYKFDGEH-----KIKVT 360
Query: 216 FAR 218
FA+
Sbjct: 361 FAK 363
>gi|432953883|ref|XP_004085463.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Oryzias latipes]
Length = 217
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 140 PPN--HILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--IAFVEFESD 189
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG+R + +++ FA+
Sbjct: 190 TQAGVAKDALQGFRITA----TCAMKITFAK 216
>gi|432953888|ref|XP_004085464.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 2
[Oryzias latipes]
Length = 218
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 141 PPN--HILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--IAFVEFESD 190
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG+R + +++ FA+
Sbjct: 191 TQAGVAKDALQGFRITA----TCAMKITFAK 217
>gi|242036017|ref|XP_002465403.1| hypothetical protein SORBIDRAFT_01g038060 [Sorghum bicolor]
gi|241919257|gb|EER92401.1| hypothetical protein SORBIDRAFT_01g038060 [Sorghum bicolor]
Length = 233
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 118 LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
LG E P PP+ + LF++ LP + + +F+ + G++EVR++ + PG
Sbjct: 146 LGKVSQEPPAPPN--NILFIQNLPDQTTSMMLQILFQQYPGFREVRMIEAK---PG---- 196
Query: 178 ILCFVDFVSPAHAATAMDALQGYRF 202
+ FV+F + + AM ALQG++
Sbjct: 197 -IAFVEFEDDSQSMVAMQALQGFKI 220
>gi|171683983|ref|XP_001906933.1| hypothetical protein [Podospora anserina S mat+]
gi|170941952|emb|CAP67604.1| unnamed protein product [Podospora anserina S mat+]
Length = 570
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 373 NTLYVGNLPVDTSEEELKQLFSKQRGYKRLCFRTKQNGP-------MCFVEFENITFATK 425
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L G++ H+ +RL F++ P G R+G
Sbjct: 426 ALNELYGFQL--HNSVKGGIRLSFSKNPLGVRTG 457
>gi|148706068|gb|EDL38015.1| mCG22457 [Mus musculus]
Length = 275
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 12/85 (14%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 200 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLV----RHD------IAFVEFDNE 247
Query: 188 AHAATAMDALQGYRFDEHDRDSVKL 212
A A DALQG++ +++ + L
Sbjct: 248 VQAGAARDALQGFKITQNNAMKISL 272
>gi|115469616|ref|NP_001058407.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|52077025|dbj|BAD46058.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113596447|dbj|BAF20321.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|215692539|dbj|BAG87959.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 219
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 126 PLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
PLPP D TLF+ GLP D REV ++FR F GY VS R G F F
Sbjct: 61 PLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGY-----VSSHLRTSGKSSQAYAFAVF 115
Query: 185 VSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
A AM A G FD + ++ + L
Sbjct: 116 ADQPSALAAMSATNGRIFDLENNCTLHVDL 145
>gi|387018112|gb|AFJ51174.1| u2 small nuclear ribonucleoprotein B-like [Crotalus adamanteus]
Length = 225
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPDA--SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
P A + G S+ PD + LF+ LP + + ++ +F F G+KEVRL
Sbjct: 123 PNQGANQNSTNAQGNASQNQQVPDNPPNHILFLNNLPEETNEMMLSMLFNQFPGFKEVRL 182
Query: 165 VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYR 201
V RH + FV+F + A A DALQG++
Sbjct: 183 VP--GRHD------ISFVEFENEGQAGAARDALQGFK 211
>gi|91078752|ref|XP_968271.1| PREDICTED: similar to U1 small nuclear ribonucleoprotein A
[Tribolium castaneum]
gi|270003743|gb|EFA00191.1| hypothetical protein TcasGA2_TC003016 [Tribolium castaneum]
Length = 214
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 12/83 (14%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
GG +E P + LF+ LP + S ++ +F F G+KEVRLV +RH
Sbjct: 130 GGSNAEQP----PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------ 177
Query: 179 LCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + + A DALQG++
Sbjct: 178 IAFVEFENELQSGAAKDALQGFK 200
>gi|195995899|ref|XP_002107818.1| hypothetical protein TRIADDRAFT_18899 [Trichoplax adhaerens]
gi|190588594|gb|EDV28616.1| hypothetical protein TRIADDRAFT_18899 [Trichoplax adhaerens]
Length = 204
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G + E+P + LF+ LP + + ++ +F F GYKEVRLV RH
Sbjct: 121 AGSQEELP-----NKILFLTNLPEETTELMLSMLFNQFPGYKEVRLVP--GRHD------ 167
Query: 179 LCFVDFVSPAHAATAMDALQGYR 201
+ FV+F S AATA ++L G++
Sbjct: 168 IAFVEFESEIQAATARNSLNGFK 190
>gi|156548050|ref|XP_001606482.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Nasonia vitripennis]
gi|345485456|ref|XP_003425274.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 2
[Nasonia vitripennis]
Length = 230
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G + VP P + LF+ LP + S ++ +F F G+KEVRLV +RH
Sbjct: 143 GMANAAVPEQP-PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------ 193
Query: 179 LCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + + A DALQG++
Sbjct: 194 IAFVEFENEVQSGAAKDALQGFK 216
>gi|327276255|ref|XP_003222885.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Anolis
carolinensis]
Length = 280
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 203 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 252
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 253 VQAGAARDALQGFKITQNN----AMKISFAK 279
>gi|223649102|gb|ACN11309.1| U2 small nuclear ribonucleoprotein B [Salmo salar]
Length = 219
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 142 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--ISFVEFESE 191
Query: 188 AHAATAMDALQGYR 201
A A DALQG+R
Sbjct: 192 GQAGVAKDALQGFR 205
>gi|222636114|gb|EEE66246.1| hypothetical protein OsJ_22424 [Oryza sativa Japonica Group]
Length = 283
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 126 PLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
PLPP D TLF+ GLP D REV ++FR F GY VS R G F F
Sbjct: 61 PLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGY-----VSSHLRTSGKSSQAYAFAVF 115
Query: 185 VSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
A AM A G FD + ++ + L
Sbjct: 116 ADQPSALAAMSATNGRIFDLENNCTLHVDL 145
>gi|395859649|ref|XP_003802146.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Otolemur
garnettii]
Length = 231
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 154 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 203
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 204 VQAGAARDALQGFKITQNN----AMKISFAK 230
>gi|226443332|ref|NP_001139849.1| U2 small nuclear ribonucleoprotein B [Salmo salar]
gi|221219334|gb|ACM08328.1| U2 small nuclear ribonucleoprotein B [Salmo salar]
Length = 219
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 142 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--ISFVEFESE 191
Query: 188 AHAATAMDALQGYR 201
A A DALQG+R
Sbjct: 192 GQAGVAKDALQGFR 205
>gi|4759156|ref|NP_004587.1| U1 small nuclear ribonucleoprotein A [Homo sapiens]
gi|134092|sp|P09012.3|SNRPA_HUMAN RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|315583598|pdb|3PGW|A Chain A, Crystal Structure Of Human U1 Snrnp
gi|315583607|pdb|3PGW|P Chain P, Crystal Structure Of Human U1 Snrnp
gi|37541|emb|CAA29653.1| unnamed protein product [Homo sapiens]
gi|340052|gb|AAA61245.1| U1 snRNP-specific protein A [Homo sapiens]
gi|12653273|gb|AAH00405.1| Small nuclear ribonucleoprotein polypeptide A [Homo sapiens]
gi|14249835|gb|AAH08290.1| Small nuclear ribonucleoprotein polypeptide A [Homo sapiens]
gi|119577399|gb|EAW56995.1| small nuclear ribonucleoprotein polypeptide A, isoform CRA_a [Homo
sapiens]
gi|208967436|dbj|BAG73732.1| small nuclear ribonucleoprotein polypeptide A [synthetic construct]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQNN----AMKISFAK 281
>gi|351715411|gb|EHB18330.1| U1 small nuclear ribonucleoprotein A [Heterocephalus glaber]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQNN----AMKISFAK 281
>gi|126329351|ref|XP_001371614.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Monodelphis
domestica]
Length = 340
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 263 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 312
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 313 VQAGAARDALQGFKITQNN----AMKISFAK 339
>gi|383873129|ref|NP_001244434.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|114677331|ref|XP_512674.2| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Pan
troglodytes]
gi|297704832|ref|XP_002829283.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Pongo abelii]
gi|397482634|ref|XP_003812525.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Pan paniscus]
gi|402905610|ref|XP_003915609.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Papio anubis]
gi|355703564|gb|EHH30055.1| hypothetical protein EGK_10636 [Macaca mulatta]
gi|355755853|gb|EHH59600.1| hypothetical protein EGM_09749 [Macaca fascicularis]
gi|380784673|gb|AFE64212.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|383414025|gb|AFH30226.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|384943590|gb|AFI35400.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|410207170|gb|JAA00804.1| small nuclear ribonucleoprotein polypeptide A [Pan troglodytes]
gi|410287236|gb|JAA22218.1| small nuclear ribonucleoprotein polypeptide A [Pan troglodytes]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQNN----AMKISFAK 281
>gi|189053747|dbj|BAG35999.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQNN----AMKISFAK 281
>gi|440910289|gb|ELR60098.1| U1 small nuclear ribonucleoprotein A, partial [Bos grunniens mutus]
Length = 287
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 210 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 259
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 260 VQAGAARDALQGFKITQNN----AMKISFAK 286
>gi|218198782|gb|EEC81209.1| hypothetical protein OsI_24241 [Oryza sativa Indica Group]
Length = 283
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 126 PLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
PLPP D TLF+ GLP D REV ++FR F GY VS R G F F
Sbjct: 61 PLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGY-----VSSHLRTSGKSSQAYAFAVF 115
Query: 185 VSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
A AM A G FD + ++ + L
Sbjct: 116 ADQPSALAAMSATNGRIFDLENNCTLHVDL 145
>gi|410909846|ref|XP_003968401.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 1
[Takifugu rubripes]
Length = 273
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 196 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 245
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ + + +++ FA+
Sbjct: 246 VQAGAARDALQGFKITQSN----AMKISFAK 272
>gi|321469536|gb|EFX80516.1| hypothetical protein DAPPUDRAFT_23478 [Daphnia pulex]
Length = 270
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ +L K + G + FV F + A A A
Sbjct: 4 TLFVSGLPMDAKPRELYLLFRAYDGYENSQL--KVTSKNGKTTSPVGFVTFATRASAEGA 61
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
LQG RFD ++ RL+FA+
Sbjct: 62 KQDLQGVRFDPDIPQTI--RLEFAK 84
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S +E+ +F F GY +R+ +K GG P + FV++ AA
Sbjct: 186 STLFVANLGQFVSEQELKELFGSFPGYCRLRMHNK-----GGAP--VAFVEYADVRCAAQ 238
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYPGARSGG 226
A+ +LQG DR V R+++AR A +GG
Sbjct: 239 ALISLQGTYLLSSDRGGV--RIEYARNKMAETGG 270
>gi|426388777|ref|XP_004060809.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 1 [Gorilla
gorilla gorilla]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQNN----AMKISFAK 281
>gi|348534739|ref|XP_003454859.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Oreochromis
niloticus]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ + + +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQTN----AMKISFAK 281
>gi|47225009|emb|CAF97424.1| unnamed protein product [Tetraodon nigroviridis]
Length = 272
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 195 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 244
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
AA A +ALQG++ + + +++ FA+
Sbjct: 245 VQAAAAREALQGFKITQTN----AMKISFAK 271
>gi|330917653|ref|XP_003297901.1| hypothetical protein PTT_08457 [Pyrenophora teres f. teres 0-1]
gi|311329202|gb|EFQ94032.1| hypothetical protein PTT_08457 [Pyrenophora teres f. teres 0-1]
Length = 559
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 375 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGP-------MCFVEFEDTSFATK 427
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L GY H+ +RL F++ P G RSG
Sbjct: 428 ALNELYGYML--HNSVKGGIRLSFSKNPLGVRSG 459
>gi|410983004|ref|XP_003997834.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Felis catus]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQNN----AMKISFAK 281
>gi|348552486|ref|XP_003462058.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cavia
porcellus]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQNN----AMKISFAK 281
>gi|225438787|ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
Length = 336
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLF+ GLP D RE+ ++FR F GY+ L R P + F F+
Sbjct: 78 DEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL-----RSPSQNSQPFAFAVFLDQQS 132
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A AM AL G FD ++ + L
Sbjct: 133 AIAAMHALNGMVFDLEKGSTLYIDL 157
>gi|444732044|gb|ELW72368.1| U1 small nuclear ribonucleoprotein A [Tupaia chinensis]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQNN----AMKISFAK 281
>gi|116175267|ref|NP_001070690.1| U1 small nuclear ribonucleoprotein A [Sus scrofa]
gi|122131847|sp|Q06AA4.1|SNRPA_PIG RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|115371743|gb|ABI96196.1| SNRPA [Sus scrofa]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQNN----AMKISFAK 281
>gi|431920192|gb|ELK18231.1| U1 small nuclear ribonucleoprotein A [Pteropus alecto]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQNN----AMKISFAK 281
>gi|73948310|ref|XP_533663.2| PREDICTED: U1 small nuclear ribonucleoprotein A [Canis lupus
familiaris]
gi|149722301|ref|XP_001499386.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Equus
caballus]
gi|301776649|ref|XP_002923740.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Ailuropoda
melanoleuca]
gi|403305332|ref|XP_003943221.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Saimiri
boliviensis boliviensis]
gi|281340732|gb|EFB16316.1| hypothetical protein PANDA_012942 [Ailuropoda melanoleuca]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQNN----AMKISFAK 281
>gi|395859647|ref|XP_003802145.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 1 [Otolemur
garnettii]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQNN----AMKISFAK 281
>gi|194375486|dbj|BAG56688.1| unnamed protein product [Homo sapiens]
Length = 203
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + A
Sbjct: 128 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRH------DIAFVEFDNEVQAG 179
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFAR 218
A DALQG++ +++ +++ FA+
Sbjct: 180 AARDALQGFKITQNN----AMKISFAK 202
>gi|452000412|gb|EMD92873.1| hypothetical protein COCHEDRAFT_1223605 [Cochliobolus
heterostrophus C5]
Length = 561
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 377 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGP-------MCFVEFEDTSFATK 429
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L GY H+ +RL F++ P G RSG
Sbjct: 430 ALNELYGYML--HNSVKGGIRLSFSKNPLGVRSG 461
>gi|355721034|gb|AES07131.1| small nuclear ribonucleoprotein polypeptide A [Mustela putorius
furo]
Length = 281
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQNN----AMKISFAK 281
>gi|296082378|emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLF+ GLP D RE+ ++FR F GY+ L R P + F F+
Sbjct: 75 DEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL-----RSPSQNSQPFAFAVFLDQQS 129
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A AM AL G FD ++ + L
Sbjct: 130 AIAAMHALNGMVFDLEKGSTLYIDL 154
>gi|114052106|ref|NP_056597.3| U1 small nuclear ribonucleoprotein A [Mus musculus]
gi|114052541|ref|NP_001040102.1| U1 small nuclear ribonucleoprotein A [Mus musculus]
gi|41017904|sp|Q62189.3|SNRPA_MOUSE RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|349004|gb|AAC37611.1| small nuclear RNA [Mus musculus]
gi|13096860|gb|AAH03229.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus]
gi|62740156|gb|AAH94006.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus]
gi|66794539|gb|AAH96648.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus]
gi|148692250|gb|EDL24197.1| mCG22754, isoform CRA_a [Mus musculus]
gi|148692251|gb|EDL24198.1| mCG22754, isoform CRA_a [Mus musculus]
Length = 287
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 210 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 259
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 260 VQAGAARDALQGFKITQNN----AMKISFAK 286
>gi|441653781|ref|XP_003270568.2| PREDICTED: U1 small nuclear ribonucleoprotein A [Nomascus
leucogenys]
Length = 211
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 134 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRH------DIAFVEFDNE 183
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 184 VQAGAARDALQGFKITQNN----AMKISFAK 210
>gi|114051315|ref|NP_001039504.1| U1 small nuclear ribonucleoprotein A [Bos taurus]
gi|187607541|ref|NP_001119825.1| U1 small nuclear ribonucleoprotein A [Ovis aries]
gi|122142801|sp|Q2KIR1.1|SNRPA_BOVIN RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|86437996|gb|AAI12545.1| Small nuclear ribonucleoprotein polypeptide A [Bos taurus]
gi|184191137|gb|ACC76781.1| SNPRA [Ovis aries]
gi|296477802|tpg|DAA19917.1| TPA: U1 small nuclear ribonucleoprotein A [Bos taurus]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQNN----AMKISFAK 281
>gi|189188620|ref|XP_001930649.1| RNA binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972255|gb|EDU39754.1| RNA binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 561
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 377 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGP-------MCFVEFEDTSFATK 429
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L GY H+ +RL F++ P G RSG
Sbjct: 430 ALNELYGYML--HNSVKGGIRLSFSKNPLGVRSG 461
>gi|432109445|gb|ELK33675.1| U1 small nuclear ribonucleoprotein A [Myotis davidii]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDALQGFKITQNN----AMKISFAK 281
>gi|56605690|ref|NP_001008304.1| U1 small nuclear ribonucleoprotein A [Rattus norvegicus]
gi|55562825|gb|AAH86331.1| Small nuclear ribonucleoprotein polypeptide A [Rattus norvegicus]
gi|149056537|gb|EDM07968.1| small nuclear ribonucleoprotein polypeptide A [Rattus norvegicus]
Length = 281
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 253
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 254 VQAGAARDALQGFKITQNN----AMKISFAK 280
>gi|354486243|ref|XP_003505291.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Cricetulus griseus]
Length = 284
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 207 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 256
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 257 VQAGAARDALQGFKITQNN----AMKISFAK 283
>gi|90077244|dbj|BAE88302.1| unnamed protein product [Macaca fascicularis]
Length = 197
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
E P P + LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 116 QETPAP---NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 164
Query: 183 DFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+F + A A DALQG++ +++ +++ FA+
Sbjct: 165 EFDNEVQAGAARDALQGFKITQNN----AMKISFAK 196
>gi|294461275|gb|ADE76200.1| unknown [Picea sitchensis]
gi|294464400|gb|ADE77712.1| unknown [Picea sitchensis]
Length = 241
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 124 EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVD 183
E P PP+ + LFV+ LP + + + +F + G+KEVR++ + PG + FV+
Sbjct: 160 EAPAPPN--NILFVQNLPHETTSMMLQMLFCQYHGFKEVRMIEAK---PG-----IAFVE 209
Query: 184 FVSPAHAATAMDALQGYRFDEHD 206
+ + AM ALQG++ +
Sbjct: 210 YADEMQSTVAMQALQGFKITPQN 232
>gi|417409102|gb|JAA51075.1| Putative spliceosomal protein snrnp-u1a/u2b, partial [Desmodus
rotundus]
Length = 258
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 181 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 230
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 231 VQAGAARDALQGFKITQNN----AMKISFAK 257
>gi|47211375|emb|CAF89828.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 141 PPN--YILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--IAFVEFESD 190
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG+R + +++ FA+
Sbjct: 191 LQAGVAKDALQGFRITA----TCAMKITFAK 217
>gi|239790913|dbj|BAH71988.1| ACYPI002883 [Acyrthosiphon pisum]
Length = 169
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP C++ ++ +IF+P+ K+VR+V+ + H G L +VDF AA A+
Sbjct: 23 LFVKGLPFTCTKTDIENIFKPYGALKDVRVVTFRNGHSKG----LAYVDFEDEVSAAQAL 78
>gi|297824185|ref|XP_002879975.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
gi|297325814|gb|EFH56234.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + P F F
Sbjct: 45 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKP------FAFAVFSDLQS 98
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A T M AL G FD ++ + L
Sbjct: 99 AVTVMHALNGMVFDLEKYSTLHIDL 123
>gi|422294869|gb|EKU22169.1| U2 small nuclear ribonucleoprotein B'', partial [Nannochloropsis
gaditana CCMP526]
Length = 289
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+ SS L + LP++C+ +A +FR F G+ E+RL + + F++F
Sbjct: 213 EVSSMLMAQELPTECTEEMLAVLFRRFAGFHEIRLAGQRG---------IAFIEFRDEVS 263
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A TA A G++ + D L+L +A+
Sbjct: 264 ARTAFQAYNGFKLSQTD----ALKLTYAK 288
>gi|390479015|ref|XP_003735632.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Callithrix jacchus]
Length = 275
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 198 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 247
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 248 VQAGAARDALQGFKITQNN----AMKISFAK 274
>gi|12851426|dbj|BAB29037.1| unnamed protein product [Mus musculus]
Length = 287
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 210 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 259
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 260 VQAGAARDALQGFKITQNN----AMKISFAK 286
>gi|169613152|ref|XP_001799993.1| hypothetical protein SNOG_09707 [Phaeosphaeria nodorum SN15]
gi|111061852|gb|EAT82972.1| hypothetical protein SNOG_09707 [Phaeosphaeria nodorum SN15]
Length = 572
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 389 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 441
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L GY H+ +RL F++ P G RSG
Sbjct: 442 ALNELYGYML--HNSVKGGIRLSFSKNPLGVRSG 473
>gi|357621621|gb|EHJ73396.1| U1 small nuclear ribonucleoprotein A [Danaus plexippus]
Length = 220
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 143 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFANE 192
Query: 188 AHAATAMDALQGYR 201
+A A +ALQG++
Sbjct: 193 MQSAAAKEALQGFK 206
>gi|301115920|ref|XP_002905689.1| U1 small nuclear ribonucleoprotein A [Phytophthora infestans T30-4]
gi|262110478|gb|EEY68530.1| U1 small nuclear ribonucleoprotein A [Phytophthora infestans T30-4]
Length = 233
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LF+E LP C++ + +F+ + G+KEVR+V PG L FV+F A AA
Sbjct: 158 NKILFLEELPESCNKEMLGVLFKQYQGFKEVRMV------PGKKG--LAFVEFGDEAQAA 209
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFAR 218
A+ L G++ + L++ FA+
Sbjct: 210 IALQGLFGFKLTPTE----ALKVSFAK 232
>gi|225437410|ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
Length = 245
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 118 LGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
LGG +S VP P ++ LF++ LP + + + F + G+KEVR+V + PG
Sbjct: 155 LGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVEAK---PG--- 208
Query: 177 LILCFVDFVSPAHAATAMDALQGYRFDEHD 206
+ FV++ + AM LQG + ++ +
Sbjct: 209 --IAFVEYGDEMQSTVAMQGLQGLKINQQN 236
>gi|387018110|gb|AFJ51173.1| U1 small nuclear ribonucleoprotein A [Crotalus adamanteus]
Length = 281
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 253
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 254 VQAGAARDALQGFKITQNN----AMKISFAK 280
>gi|357112644|ref|XP_003558118.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like
[Brachypodium distachyon]
Length = 233
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 118 LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G E P PP+ LF++ LP + + +FR + G+ EVR++ + PG
Sbjct: 146 FGKAPQEPPAPPN--KILFIQNLPDQTTSMMLQLLFRQYPGFWEVRMIEAK---PG---- 196
Query: 178 ILCFVDFVSPAHAATAMDALQGYRFDEHD 206
+ FV+F + + AM ALQG++ +
Sbjct: 197 -IAFVEFEDESQSMVAMQALQGFKISPEN 224
>gi|449512082|ref|XP_002199484.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Taeniopygia
guttata]
Length = 221
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 11/82 (13%)
Query: 122 RSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
+++VP PPD LF+ LP + + ++ +F F G+KEVRLV RH +
Sbjct: 137 QNQVPDNPPD--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IA 186
Query: 181 FVDFVSPAHAATAMDALQGYRF 202
FV+F + A A DALQG++
Sbjct: 187 FVEFENENQAGAARDALQGFKI 208
>gi|270047496|ref|NP_001161808.1| U1 small nuclear ribonucleoprotein A [Apis mellifera]
Length = 231
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 154 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 203
Query: 188 AHAATAMDALQGYRF 202
+ A DALQG++
Sbjct: 204 VQSGAAKDALQGFKI 218
>gi|380024353|ref|XP_003695965.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Apis
florea]
Length = 231
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 154 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 203
Query: 188 AHAATAMDALQGYRF 202
+ A DALQG++
Sbjct: 204 VQSGAAKDALQGFKI 218
>gi|348538124|ref|XP_003456542.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Oreochromis
niloticus]
Length = 218
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 141 PPN--YILFLSNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--IAFVEFESD 190
Query: 188 AHAATAMDALQGYRF 202
A A DALQG+R
Sbjct: 191 TQAGVAKDALQGFRI 205
>gi|449439191|ref|XP_004137370.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis
sativus]
gi|449520549|ref|XP_004167296.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis
sativus]
Length = 231
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LF+E LP + S + +F+ + G++EVR++ + PG + FV+F ++
Sbjct: 156 NNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAK---PG-----IAFVEFEDDVQSS 207
Query: 192 TAMDALQGYRFD 203
AM ALQG++ D
Sbjct: 208 MAMQALQGFKID 219
>gi|322797045|gb|EFZ19352.1| hypothetical protein SINV_13322 [Solenopsis invicta]
Length = 152
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 29/150 (19%)
Query: 85 MSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG------GGRSEVPLPPDASST---- 134
M G RP R++ + + AK RA G + VP P +T
Sbjct: 15 MKGTFAERPKKPKRVIPVAD-EEAKRAKKRAKEQAKHSQQIGYHASVPQHPGLVNTAVPE 73
Query: 135 ------LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 74 QPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENEV 125
Query: 189 HAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ A DALQG++ S +++ FA+
Sbjct: 126 QSGAAKDALQGFKIT----PSHAMKISFAK 151
>gi|339251724|ref|XP_003372884.1| protein couch potato [Trichinella spiralis]
gi|316968731|gb|EFV52966.1| protein couch potato [Trichinella spiralis]
Length = 355
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L K ++ G + FV F S A A A
Sbjct: 67 TLFVSGLPIDAKPRELYLLFRAYKGYESSLL--KVTQKNGKATTPIGFVTFNSRAAAEEA 124
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+LQG +FD + RL+FAR
Sbjct: 125 KQSLQGVKFDPELPQPI--RLEFAR 147
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S+TLFV L + +E+ +F G+ +R++ H G P+ FV++ +A
Sbjct: 264 STTLFVANLGAKTQEQELLEVFSNIPGFIRLRIL-----HKNGFPV--AFVEYSDVINAN 316
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGG 227
A++ALQG+ DR +R++FAR A GGG
Sbjct: 317 HALNALQGFVLMSSDRGG--MRIEFARSKPAEVGGG 350
>gi|410909848|ref|XP_003968402.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 2
[Takifugu rubripes]
Length = 279
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 202 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 251
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ + + +++ FA+
Sbjct: 252 VQAGAARDALQGFKITQSN----AMKISFAK 278
>gi|307195443|gb|EFN77329.1| U2 small nuclear ribonucleoprotein B'' [Harpegnathos saltator]
Length = 231
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 154 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 203
Query: 188 AHAATAMDALQGYRF 202
+ A DALQG++
Sbjct: 204 VQSGAAKDALQGFKI 218
>gi|340726396|ref|XP_003401545.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Bombus
terrestris]
gi|350423999|ref|XP_003493658.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Bombus
impatiens]
Length = 233
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 156 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 205
Query: 188 AHAATAMDALQGYRF 202
+ A DALQG++
Sbjct: 206 VQSGAAKDALQGFKI 220
>gi|297743906|emb|CBI36876.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 118 LGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
LGG +S VP P ++ LF++ LP + + + F + G+KEVR+V + PG
Sbjct: 142 LGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVEAK---PG--- 195
Query: 177 LILCFVDFVSPAHAATAMDALQGYRFDEHD 206
+ FV++ + AM LQG + ++ +
Sbjct: 196 --IAFVEYGDEMQSTVAMQGLQGLKINQQN 223
>gi|344250312|gb|EGW06416.1| U1 small nuclear ribonucleoprotein A [Cricetulus griseus]
Length = 291
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 214 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 263
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 264 VQAGAARDALQGFKITQNN----AMKISFAK 290
>gi|302832471|ref|XP_002947800.1| hypothetical protein VOLCADRAFT_103581 [Volvox carteri f.
nagariensis]
gi|300267148|gb|EFJ51333.1| hypothetical protein VOLCADRAFT_103581 [Volvox carteri f.
nagariensis]
Length = 224
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LFV+ LP + + + +F+ F G++EVR+V E+R PG + FV+F + +
Sbjct: 149 NKILFVQNLPENSNEAMLGMLFQQFPGFREVRMV--EAR-PG-----IAFVEFENDMQST 200
Query: 192 TAMDALQGYRF 202
TAM LQG++
Sbjct: 201 TAMQGLQGFKI 211
>gi|402220077|gb|EJU00150.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 276
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP + ++ +F + G EVRLV + + FV++V
Sbjct: 198 LPPN--KILFLQNLPDSTTLDQLQMLFSQYPGLHEVRLVPTKKD--------IAFVEYVD 247
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A+TA DAL YR D K+++ FAR
Sbjct: 248 ENAASTAKDALHNYRLD----GEAKMKVTFAR 275
>gi|330842469|ref|XP_003293200.1| hypothetical protein DICPUDRAFT_83777 [Dictyostelium purpureum]
gi|325076492|gb|EGC30273.1| hypothetical protein DICPUDRAFT_83777 [Dictyostelium purpureum]
Length = 233
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ TLFVE LP C + +F F GYKEV +V ES+ + FV+F
Sbjct: 155 LPPN--KTLFVENLPDKCDPMMLEMLFSQFPGYKEVHMV--ESKKG------IAFVEFQD 204
Query: 187 PAHAATAMDALQGYRFDEH 205
+ + AM +LQ ++ +
Sbjct: 205 ESKSGLAMQSLQHFKVTQE 223
>gi|313231398|emb|CBY08513.1| unnamed protein product [Oikopleura dioica]
Length = 239
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH---PGGDPL-ILCFVDFVSPAH 189
TLFV GLP D RE +F+ F G+ E +V + R+ P PL + F+ F S
Sbjct: 45 TLFVSGLPQDVKEREFYLLFQGFSGF-ECAIVKQPVRNVKLPNNQPLGPVAFLTFASRKD 103
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A TA D G+ D D++ ++++FA+
Sbjct: 104 AETAKDKFHGFALDPQ-VDNLVMKIEFAK 131
>gi|149640848|ref|XP_001514376.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Ornithorhynchus anatinus]
gi|345329106|ref|XP_003431335.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like
[Ornithorhynchus anatinus]
Length = 225
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 120 GGRSEVPLPPDA--SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G ++ P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNAAQNPQVPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQGYRF 202
+ FV+F + A A DALQG++
Sbjct: 189 -IAFVEFENDGQAGAARDALQGFKI 212
>gi|296412291|ref|XP_002835858.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629654|emb|CAZ80015.1| unnamed protein product [Tuber melanosporum]
Length = 772
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 92 RPVDDPRI---VGIGGMDPGPSAKDRALGLGGGRSEVPLPPDA-SSTLFVEGLPSDCSRR 147
+ VD P+I V +G DP SA D L L S +A +STLFV+ L +
Sbjct: 509 KIVDAPKIPAAVALGK-DPKVSATD--LLLPAHTSTATDEAEAGTSTLFVQNLNFTTTTA 565
Query: 148 EVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVSPAHAATAMDALQGYRFDEH 205
++ +F+P G+ R+ +K + ++PGG + F +F S AM AL GY D H
Sbjct: 566 KLTELFKPINGFLSARVKTKPDPKNPGGTLSMGFGFAEFRSKTDGMAAMAALNGYVLDGH 625
>gi|403221977|dbj|BAM40109.1| U1/2 small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 206
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+ S TLFVE +PSD S+ + +FR + G+K R + E R+ + FVD+
Sbjct: 131 EESHTLFVENIPSDMSKDSLELLFRQYPGFKNCRFI--EGRY-------VAFVDYSMATQ 181
Query: 190 AATAMDALQGYR 201
A A++ LQG+R
Sbjct: 182 AEIALEGLQGFR 193
>gi|383847977|ref|XP_003699629.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Megachile
rotundata]
Length = 231
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 154 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 203
Query: 188 AHAATAMDALQGYRF 202
+ A DALQG++
Sbjct: 204 VQSGAAKDALQGFKI 218
>gi|312372120|gb|EFR20150.1| hypothetical protein AND_20571 [Anopheles darlingi]
Length = 216
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 110 SAKDRALGLGGGRSE---VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
S K +A G G + PP+ LF+ LP + + ++ +F F G+KEVRLV
Sbjct: 118 SKKQKAAGEVGATNNSATAEQPPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP 175
Query: 167 KESRHPGGDPLILCFVDFVSPAHAATAMDALQGYR 201
+RH + FV+F S + A +ALQG++
Sbjct: 176 --NRHD------IAFVEFASEVQSGAAREALQGFK 202
>gi|395507829|ref|XP_003758221.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Sarcophilus
harrisii]
Length = 225
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
PG +A + A G + P PD + LF+ LP + + ++ +F F G+KEVRL
Sbjct: 124 PGQAAPNSA-NTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL 182
Query: 165 VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYR 201
V RH + FV+F + A A DALQG++
Sbjct: 183 VP--GRHD------IAFVEFENDGQAGAARDALQGFK 211
>gi|268564730|ref|XP_002639203.1| C. briggsae CBR-MEC-8 protein [Caenorhabditis briggsae]
Length = 305
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A STLFV L ++ + ++ +F+ F G+ +RL +K + FV++ A
Sbjct: 219 ACSTLFVANLSAEVNEDQLRGVFKAFTGFTRLRLHNKNGS-------CVAFVEYSDLQKA 271
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGG 226
AM ALQG++ +DR LR+++AR A G
Sbjct: 272 TQAMLALQGFQVSANDRGG--LRIEYARNKMADVNG 305
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESR--HPGGDPLILCFVDF 184
P TLFV GLP D RE+ +FR GY+ +++ SK + P G FV F
Sbjct: 27 PSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVG------FVTF 80
Query: 185 VSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
++ A A LQG RFD ++L L
Sbjct: 81 LTQQDAQDARKMLQGVRFDPECAQVLRLEL 110
>gi|318065773|ref|NP_001187499.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus punctatus]
gi|308322301|gb|ADO28288.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus furcatus]
gi|308323171|gb|ADO28722.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus punctatus]
Length = 219
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F
Sbjct: 142 PPN--YILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--IAFVEFEGE 191
Query: 188 AHAATAMDALQGYRF 202
A A A DALQG+R
Sbjct: 192 AQAGVAKDALQGFRI 206
>gi|392883960|gb|AFM90812.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
Length = 226
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 109 PSAKDRALGLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
P+ + +VP PP+ LF+ LP + + ++ +F F G+KEVRLV
Sbjct: 129 PTTANSNQTTSSANQQVPDNPPN--YILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP- 185
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQGYR 201
RH + FV+F + A A DALQG+R
Sbjct: 186 -GRHD------IAFVEFENEGQAGAARDALQGFR 212
>gi|149597291|ref|XP_001509496.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like
[Ornithorhynchus anatinus]
Length = 139
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + A
Sbjct: 64 NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRH------DIAFVEFDNEVQAG 115
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFAR 218
A DALQG++ +++ +++ FA+
Sbjct: 116 AARDALQGFKITQNN----AMKISFAK 138
>gi|396474256|ref|XP_003839528.1| similar to RNA binding protein [Leptosphaeria maculans JN3]
gi|312216097|emb|CBX96049.1| similar to RNA binding protein [Leptosphaeria maculans JN3]
Length = 572
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 384 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGP-------MCFVEFEDTSFATK 436
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L GY H+ +RL F++ P G RSG
Sbjct: 437 ALNDLYGYML--HNSVKGGIRLSFSKNPLGVRSG 468
>gi|449280001|gb|EMC87413.1| U2 small nuclear ribonucleoprotein B'' [Columba livia]
Length = 226
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 102 IGGMDPGPSAKDRALGLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
I G P ++ A G +VP PP+ LF+ LP + + ++ +F F G+K
Sbjct: 125 IQGATPNSAS---APGTAAQNQQVPDNPPN--YILFLNNLPEETNEMMLSMLFNQFPGFK 179
Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYR 201
EVRLV RH + FV+F + A A DALQG++
Sbjct: 180 EVRLVP--GRHD------IAFVEFENENQAGAARDALQGFK 212
>gi|346326538|gb|EGX96134.1| RNA binding protein [Cordyceps militaris CM01]
Length = 444
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 69/152 (45%), Gaps = 20/152 (13%)
Query: 83 RHMSGGMP-SRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDAS--------S 133
++S G+P R P++ GG PG S G S P PP A+ +
Sbjct: 218 NNVSQGIPFGRRATAPQLPINGGAGPGNSVTHMNFNHPPG-SHHPRPPPANPADQNPPCN 276
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TL+V LPSD S E+ +F GYK + +K S P +CFV+F + A A
Sbjct: 277 TLYVGNLPSDTSEEELKAMFSKQRGYKRLCFRTK-SNGP------MCFVEFEDVSFATKA 329
Query: 194 MDALQGYRFDEHDRDSVKLRLQFARYP-GARS 224
+ L G+ H+ +RL F++ P G RS
Sbjct: 330 LHELYGHPL--HNSTKGGIRLSFSKNPLGVRS 359
>gi|387914214|gb|AFK10716.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392878676|gb|AFM88170.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884228|gb|AFM90946.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884422|gb|AFM91043.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884424|gb|AFM91044.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
Length = 226
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 109 PSAKDRALGLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
P+ + +VP PP+ LF+ LP + + ++ +F F G+KEVRLV
Sbjct: 129 PTTANSNQTTSSANQQVPDNPPN--YILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP- 185
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQGYR 201
RH + FV+F + A A DALQG+R
Sbjct: 186 -GRHD------IAFVEFENEGQAGAARDALQGFR 212
>gi|428182625|gb|EKX51485.1| hypothetical protein GUITHDRAFT_159319 [Guillardia theta CCMP2712]
Length = 237
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LF+E LP + + + +F+ F G EVR+V PG + FV+F S A AA
Sbjct: 161 NKILFLERLPDEINVEMLQTLFKQFPGLAEVRMV------PGKTGI--AFVEFESDAQAA 212
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFAR 218
TA D LQG++ + LR+ +A+
Sbjct: 213 TARDTLQGFKLTPTNT----LRITYAK 235
>gi|149057909|gb|EDM09152.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
gi|149057914|gb|EDM09157.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
gi|149057919|gb|EDM09162.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
Length = 107
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 119 GGGR-------SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GGG+ SE L + TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQ 198
P G FV F S + A A +AL
Sbjct: 62 PVG------FVSFDSRSEAEAAKNALN 82
>gi|291234607|ref|XP_002737237.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Saccoglossus
kowalevskii]
Length = 249
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ + LF+ LP + + + +F F +KEVRLV RH + FV+F +
Sbjct: 172 PPN--NILFLTNLPEETNEMMLQMLFNQFQAFKEVRLVP--GRHD------IAFVEFENE 221
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ + +++ FA+
Sbjct: 222 TQAGVAKDALQGFKITPSNA----MKISFAK 248
>gi|328697641|ref|XP_003240396.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 2 [Acyrthosiphon pisum]
Length = 854
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP C++ ++ +IF+P+ K+VR+V+ + H G L +VDF AA A+
Sbjct: 708 LFVKGLPFTCTKTDIENIFKPYGALKDVRVVTFRNGHSKG----LAYVDFEDEVSAAQAL 763
>gi|328697639|ref|XP_001946245.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 1 [Acyrthosiphon pisum]
Length = 854
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP C++ ++ +IF+P+ K+VR+V+ + H G L +VDF AA A+
Sbjct: 708 LFVKGLPFTCTKTDIENIFKPYGALKDVRVVTFRNGHSKG----LAYVDFEDEVSAAQAL 763
>gi|307110924|gb|EFN59159.1| hypothetical protein CHLNCDRAFT_50008 [Chlorella variabilis]
Length = 236
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LFVE LP + V +F+ F G+KEVR+V + PG + FV++ A
Sbjct: 160 NHILFVENLPGTANEAMVGMLFQQFTGFKEVRMVPAK---PG-----IAFVEYSDEGQAG 211
Query: 192 TAMDALQGYRF 202
AM LQG++
Sbjct: 212 VAMQGLQGFKL 222
>gi|157836397|pdb|2U1A|A Chain A, Rna Binding Domain 2 Of Human U1a Protein, Nmr, 20
Structures
Length = 88
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 11 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 60
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 61 VQAGAARDALQGFKITQNN----AMKISFAK 87
>gi|428185283|gb|EKX54136.1| hypothetical protein GUITHDRAFT_100384 [Guillardia theta CCMP2712]
Length = 424
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
+LF+ G+P DC RE+ ++FR F G++ L H G +++ FV F +P A A
Sbjct: 136 SLFLSGIPYDCRAREIYNMFRLFPGFRYSTL------HRNG-KILVAFVTFETPDQAINA 188
Query: 194 MDALQGYRFDEHDRDSVKLRL 214
+ G RFD + R S+++ +
Sbjct: 189 GRQVNGTRFDPYVRLSLRVHV 209
>gi|410917616|ref|XP_003972282.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Takifugu rubripes]
Length = 246
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 169 PPN--YILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--ISFVEFESD 218
Query: 188 AHAATAMDALQGYRF 202
A A DALQG+R
Sbjct: 219 VQAGVAKDALQGFRI 233
>gi|357482791|ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355513017|gb|AES94640.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 340
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 123 SEVPLPPDASS---TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
S VP P +++ TLF+ GLP D RE+ ++FR F GY+ L R P
Sbjct: 69 SYVPSPLASTNDVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL-----RSPNNSSQAF 123
Query: 180 CFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
F F + A A+ AL G FD ++ + L
Sbjct: 124 AFAVFSNQQSAIMALHALNGMIFDLEKGSTLYIDL 158
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 125 VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
+P +TLFV L C+ +E+ +F F G+ ++++ S G P+ FVDF
Sbjct: 245 IPTNTTPCATLFVANLGPSCNEQELIQVFSRFPGFLKLKMQSTY-----GAPV--SFVDF 297
Query: 185 VSPAHAATAMDALQG 199
A A+++LQG
Sbjct: 298 KDIPSATVALNSLQG 312
>gi|238495454|ref|XP_002378963.1| RNA binding protein [Aspergillus flavus NRRL3357]
gi|317149634|ref|XP_001823556.2| RNA binding protein [Aspergillus oryzae RIB40]
gi|220695613|gb|EED51956.1| RNA binding protein [Aspergillus flavus NRRL3357]
gi|391872269|gb|EIT81403.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 614
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A
Sbjct: 405 NTLYVGNLPPDASEEELKALFMKQRGYKRLCFRNKQNG-------PMCFVEFEDVGTAGK 457
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
+++ L GY+ +S+K +RL F++ P G RSG
Sbjct: 458 SLNELYGYKLS----NSIKTGIRLSFSKNPLGVRSG 489
>gi|332022263|gb|EGI62578.1| U2 small nuclear ribonucleoprotein B'' [Acromyrmex echinatior]
Length = 184
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 107 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 156
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ A DALQG++ S +++ FA+
Sbjct: 157 VQSGAAKDALQGFKIT----PSHAMKISFAK 183
>gi|449681275|ref|XP_002157969.2| PREDICTED: uncharacterized protein LOC100208163 [Hydra
magnipapillata]
Length = 328
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
TLFV GLP D RE+ +FR + GY+ ++L KE G + FV F + A
Sbjct: 28 TLFVSGLPMDTKPREIYLMFRSYSGYQGSLLKLTGKE----GKKATPVAFVTFENREQAE 83
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFAR 218
LQG RFD S+ R++FA+
Sbjct: 84 VCKAELQGIRFDPELPTSI--RIEFAK 108
>gi|126723082|ref|NP_001075629.1| nuclear ribonucleoprotein A [Oryctolagus cuniculus]
gi|38641409|gb|AAR26269.1| nuclear ribonucleoprotein A [Oryctolagus cuniculus]
Length = 282
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A D+LQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDSLQGFKITQNN----AMKISFAK 281
>gi|118485733|gb|ABK94716.1| unknown [Populus trichocarpa]
Length = 254
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP++ + + +F+ + G+KEVR+V + PG
Sbjct: 165 GGVKSMVPEAPAPPN--NILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAK---PG-- 217
Query: 176 PLILCFVDFVSPAHAATAMDALQGYRFDEHD 206
+ FV++ + AM LQG++ + +
Sbjct: 218 ---IAFVEYGDEMQSTGAMHGLQGFKILQQN 245
>gi|307190556|gb|EFN74543.1| U1 small nuclear ribonucleoprotein A [Camponotus floridanus]
Length = 184
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 107 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 156
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ A DALQG++ S +++ FA+
Sbjct: 157 VQSGAAKDALQGFKIT----PSHAMKISFAK 183
>gi|147802946|emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
Length = 335
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 5/85 (5%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLF+ GLP D RE+ ++FR F GY+ L R P + F F+
Sbjct: 75 DEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL-----RSPSQNSQPFAFAVFLDQQS 129
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A M AL G FD ++ + L
Sbjct: 130 AIATMHALNGMVFDLEKGSTLYIDL 154
>gi|357125294|ref|XP_003564329.1| PREDICTED: uncharacterized protein LOC100840294 isoform 1
[Brachypodium distachyon]
Length = 302
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
+S V +PP STLF+E L C+ E+ +F G+ +++ R GG P F
Sbjct: 211 KSSVDIPP--CSTLFIENLGQTCTEEELEEVFSKQPGFHVLKM-----RRRGGMP--AAF 261
Query: 182 VDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
DF + AM+ LQG D D LR+++AR
Sbjct: 262 ADFTDIESSTAAMNNLQGTILSSSDSDG--LRIEYAR 296
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ ++F G+ + L + G + FV F + A +
Sbjct: 38 TLFVAGLPDDVKPREIHNLFSRRPGFDQCLL-----EYTGRGNQVCAFVSFFTHQAALST 92
Query: 194 MDALQGYRFDEHDRDSVKLRLQFARYPGARSGGG 227
M AL G FD + D L ++ A+ R GG
Sbjct: 93 MLALNGTVFDPENGDC--LHIELAKSNSRRRHGG 124
>gi|357125296|ref|XP_003564330.1| PREDICTED: uncharacterized protein LOC100840294 isoform 2
[Brachypodium distachyon]
Length = 261
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
+S V +PP STLF+E L C+ E+ +F G+ +++ R GG P F
Sbjct: 170 KSSVDIPP--CSTLFIENLGQTCTEEELEEVFSKQPGFHVLKM-----RRRGGMP--AAF 220
Query: 182 VDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
DF + AM+ LQG D D LR+++AR
Sbjct: 221 ADFTDIESSTAAMNNLQGTILSSSDSDG--LRIEYAR 255
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ ++F G+ + L + G + FV F + A +
Sbjct: 38 TLFVAGLPDDVKPREIHNLFSRRPGFDQCLL-----EYTGRGNQVCAFVSFFTHQAALST 92
Query: 194 MDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRG 230
M AL G FD + D L ++ A+ R GG G
Sbjct: 93 MLALNGTVFDPENGDC--LHIELAKSNSRRRHGGEGG 127
>gi|83772293|dbj|BAE62423.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 566
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A
Sbjct: 357 NTLYVGNLPPDASEEELKALFMKQRGYKRLCFRNKQNG-------PMCFVEFEDVGTAGK 409
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
+++ L GY+ +S+K +RL F++ P G RSG
Sbjct: 410 SLNELYGYKLS----NSIKTGIRLSFSKNPLGVRSG 441
>gi|195134172|ref|XP_002011511.1| snf [Drosophila mojavensis]
gi|193906634|gb|EDW05501.1| snf [Drosophila mojavensis]
Length = 216
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 188
Query: 188 AHAATAMDALQGYR 201
+ A +ALQG++
Sbjct: 189 LQSNAAKEALQGFK 202
>gi|339260634|ref|XP_003368308.1| protein couch potato [Trichinella spiralis]
gi|316959609|gb|EFV47705.1| protein couch potato [Trichinella spiralis]
Length = 155
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L + P + FV F S A A A
Sbjct: 3 TLFVSGLPIDAKPRELYLLFRAYKGYESSLLKVTQKNGKATTP--IGFVTFNSRAAAEEA 60
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+LQG +FD + RL+FAR
Sbjct: 61 KQSLQGVKFDPELPQPI--RLEFAR 83
>gi|451850380|gb|EMD63682.1| hypothetical protein COCSADRAFT_27011 [Cochliobolus sativus ND90Pr]
Length = 936
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 752 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 804
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L GY H+ +RL F++ P G RSG
Sbjct: 805 ALNELYGYML--HNSVKGGIRLSFSKNPLGVRSG 836
>gi|255587763|ref|XP_002534389.1| RNA binding protein, putative [Ricinus communis]
gi|223525395|gb|EEF27997.1| RNA binding protein, putative [Ricinus communis]
Length = 318
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L R P F F
Sbjct: 72 DLVRTLFVAGLPEDVMPREIYNLFREFPGYESSHL-----RTPTQTSQPFAFATFADQPS 126
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A AM AL G FD ++ + L
Sbjct: 127 AVAAMHALNGMVFDLEKGSTLYIDL 151
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 111 AKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
AK + S P P TLFV L +C+ +E+ +F F G+ ++++ S
Sbjct: 220 AKTETKSINSNNSSAPPCP----TLFVANLGPNCTEQELTQLFSRFAGFLKLKMQSTY-- 273
Query: 171 HPGGDPLILCFVDFVSPAHAATAMDALQG 199
G P + FVDF A + A++ LQG
Sbjct: 274 ---GAP--VAFVDFQDTACSTGALNHLQG 297
>gi|195396809|ref|XP_002057021.1| GJ16850 [Drosophila virilis]
gi|194146788|gb|EDW62507.1| GJ16850 [Drosophila virilis]
Length = 216
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 188
Query: 188 AHAATAMDALQGYR 201
+ A +ALQG++
Sbjct: 189 LQSNAAKEALQGFK 202
>gi|195340669|ref|XP_002036935.1| GM12396 [Drosophila sechellia]
gi|194131051|gb|EDW53094.1| GM12396 [Drosophila sechellia]
Length = 216
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 188
Query: 188 AHAATAMDALQGYR 201
+ A +ALQG++
Sbjct: 189 LQSNAAKEALQGFK 202
>gi|17737284|ref|NP_511045.1| sans fille [Drosophila melanogaster]
gi|1173325|sp|P43332.1|SNRPA_DROME RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A; AltName: Full=Sex
determination protein snf
gi|157172|gb|AAA28441.1| small nuclear ribonucleoprotein [Drosophila melanogaster]
gi|463051|gb|AAA28903.1| nuclear protein [Drosophila melanogaster]
gi|7290566|gb|AAF46017.1| sans fille [Drosophila melanogaster]
gi|16769640|gb|AAL29039.1| LD45302p [Drosophila melanogaster]
gi|220944458|gb|ACL84772.1| snf-PA [synthetic construct]
gi|220954252|gb|ACL89669.1| snf-PA [synthetic construct]
Length = 216
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 188
Query: 188 AHAATAMDALQGYR 201
+ A +ALQG++
Sbjct: 189 LQSNAAKEALQGFK 202
>gi|327260920|ref|XP_003215280.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Anolis
carolinensis]
Length = 224
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 147 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 196
Query: 188 AHAATAMDALQGYRF 202
A A DALQG++
Sbjct: 197 GQAGAARDALQGFKI 211
>gi|156408498|ref|XP_001641893.1| predicted protein [Nematostella vectensis]
gi|156229034|gb|EDO49830.1| predicted protein [Nematostella vectensis]
Length = 97
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D REV +FR F GY E L+ + P + FV F + A+ A
Sbjct: 3 TLFVSGLPLDVKPREVYLLFRSFKGY-EGSLLKLTDKQP------VAFVTFENKDCASDA 55
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
LQG +FD + LRL+FA+
Sbjct: 56 KSELQGVQFDPDVSQT--LRLEFAK 78
>gi|41054443|ref|NP_955965.1| U1 small nuclear ribonucleoprotein A [Danio rerio]
gi|39850066|gb|AAH64308.1| Small nuclear ribonucleoprotein polypeptide A [Danio rerio]
Length = 281
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 253
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A +ALQG++ + + +++ FA+
Sbjct: 254 VQAGAAREALQGFKITQSN----AMKISFAK 280
>gi|320168309|gb|EFW45208.1| RNA binding domain-containing protein [Capsaspora owczarzaki ATCC
30864]
Length = 1179
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFVSPAHAATA 193
LFV LP C+ ++ +F F EV + + KE++ P G FV F+ P HA TA
Sbjct: 609 LFVRNLPYTCTEDDLIALFSKFGQLAEVHMPIDKETKKPTG----FAFVLFLMPEHAVTA 664
Query: 194 MDALQGYRF 202
AL G F
Sbjct: 665 FRALDGSTF 673
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S+ L V +P + +R+E+ +F PF K VRL K PGG F++F++ A
Sbjct: 1062 STKLIVRNVPFEATRKELFDVFSPFGQLKSVRLPQK----PGGQHRGFAFIEFLTKEEAK 1117
Query: 192 TAMDALQGYRF 202
A ++L+ F
Sbjct: 1118 KAFESLKATHF 1128
>gi|28207152|gb|AAO37216.1| hypothetical protein [Arabidopsis thaliana]
Length = 204
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + P F F
Sbjct: 32 DEVRTLFVAGLPEDVKPREIXNLFREFPGYETSHLRSSDGAKP------FAFAVFSDLQS 85
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A M AL G FD ++ + L
Sbjct: 86 AVAVMHALNGMVFDLEKHSTLHIDL 110
>gi|351726226|ref|NP_001237887.1| uncharacterized protein LOC100499914 [Glycine max]
gi|255627621|gb|ACU14155.1| unknown [Glycine max]
Length = 232
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 108 GPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
GP+A R G G E P ++ LF+E LP + + R + +F + G+KEV L+
Sbjct: 139 GPTASFRQ---GPGAQEAAAP---NNILFIENLPHETTGRMLEMLFEQYPGFKEVCLIEA 192
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHD 206
+ PG + FVDF ++ AM AL G++ +
Sbjct: 193 K---PG-----IAFVDFEDEVQSSMAMQALHGFKITPQN 223
>gi|194888638|ref|XP_001976948.1| GG18748 [Drosophila erecta]
gi|190648597|gb|EDV45875.1| GG18748 [Drosophila erecta]
Length = 216
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 188
Query: 188 AHAATAMDALQGYR 201
+ A +ALQG++
Sbjct: 189 LQSNAAKEALQGFK 202
>gi|195476907|ref|XP_002100029.1| GE16390 [Drosophila yakuba]
gi|194187553|gb|EDX01137.1| GE16390 [Drosophila yakuba]
Length = 216
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 188
Query: 188 AHAATAMDALQGYR 201
+ A +ALQG++
Sbjct: 189 LQSNAAKEALQGFK 202
>gi|224128458|ref|XP_002320337.1| predicted protein [Populus trichocarpa]
gi|222861110|gb|EEE98652.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP++ + + +F+ + G+KEVR+V + PG
Sbjct: 142 GGVKSMVPEAPAPPN--NILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAK---PG-- 194
Query: 176 PLILCFVDFVSPAHAATAMDALQGYRFDEHD 206
+ FV++ + AM LQG++ + +
Sbjct: 195 ---IAFVEYGDEMQSTGAMHGLQGFKILQQN 222
>gi|50738734|ref|XP_419331.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Gallus
gallus]
gi|326914835|ref|XP_003203728.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Meleagris
gallopavo]
Length = 226
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 149 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 198
Query: 188 AHAATAMDALQGYRF 202
A A DALQG++
Sbjct: 199 CQAGAARDALQGFKI 213
>gi|195046460|ref|XP_001992159.1| GH24608 [Drosophila grimshawi]
gi|193893000|gb|EDV91866.1| GH24608 [Drosophila grimshawi]
Length = 216
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 188
Query: 188 AHAATAMDALQGYR 201
+ A +ALQG++
Sbjct: 189 LQSNAAKEALQGFK 202
>gi|295314954|gb|ADF97627.1| small nuclear ribonucleoprotein polypeptide A [Hypophthalmichthys
molitrix]
Length = 281
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 253
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A +ALQG++ + + +++ FA+
Sbjct: 254 VQAGAAREALQGFKITQSN----AMKISFAK 280
>gi|195554301|ref|XP_002076873.1| GD24751 [Drosophila simulans]
gi|194202891|gb|EDX16467.1| GD24751 [Drosophila simulans]
Length = 169
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 92 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 141
Query: 188 AHAATAMDALQGYR 201
+ A +ALQG++
Sbjct: 142 LQSNAAKEALQGFK 155
>gi|351722454|ref|NP_001235453.1| uncharacterized protein LOC100500002 [Glycine max]
gi|255628437|gb|ACU14563.1| unknown [Glycine max]
Length = 241
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 13/91 (14%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP+D + + +F + G+KEVR+V + PG
Sbjct: 152 GGAKSMVPEAPAPPN--NILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETK---PG-- 204
Query: 176 PLILCFVDFVSPAHAATAMDALQGYRFDEHD 206
+ FV++ + AM LQ ++ +
Sbjct: 205 ---IAFVEYGDEMQSTVAMQTLQCFKITPQN 232
>gi|409052167|gb|EKM61643.1| hypothetical protein PHACADRAFT_248371 [Phanerochaete carnosa
HHB-10118-sp]
Length = 267
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP + ++ ++ +F + EVRL+ + + FV+++
Sbjct: 189 LPPN--KILFLQNLPENVTKDQLMALFSQYPNLYEVRLIPTKKD--------IAFVEYLD 238
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A A DAL Y+ D + K+++ FAR
Sbjct: 239 EASATVAKDALHNYKLDGEN----KIKITFAR 266
>gi|449495575|ref|XP_004176204.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Taeniopygia
guttata]
Length = 225
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 11/81 (13%)
Query: 122 RSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
+++VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH +
Sbjct: 141 QNQVPDNPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IA 190
Query: 181 FVDFVSPAHAATAMDALQGYR 201
FV+F + A A DALQG++
Sbjct: 191 FVEFENENQAGAARDALQGFK 211
>gi|417397429|gb|JAA45748.1| Putative spliceosomal protein snrnp-u1a/u2b [Desmodus rotundus]
Length = 225
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
PG A + A G + P PD + LF+ LP + + ++ +F F G+KEVRL
Sbjct: 124 PGQGAPNSA-NTQGNATPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL 182
Query: 165 VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYR 201
V RH + FV+F + A A DALQG++
Sbjct: 183 VP--GRHD------IAFVEFENDGQAGAARDALQGFK 211
>gi|291241724|ref|XP_002740760.1| PREDICTED: conserved hypothetical protein-like, partial
[Saccoglossus kowalevskii]
Length = 297
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L K + G + + FV F + A A
Sbjct: 3 TLFVSGLPMDAKPRELYLLFRAYKGYEGSLL--KVTGKQGKNTSPVGFVTFETRVGAEAA 60
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
ALQG RFD + LRL+FA+
Sbjct: 61 KQALQGVRFDPDIPQT--LRLEFAK 83
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L + + E+ +F G+ +RL +K GG P CFV+F + A+
Sbjct: 198 STLFVANLGTHTTEEELRELFGRIPGFSRLRLHNK-----GGAPC--CFVEFQNVVFASQ 250
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
A++ +QG DR LR++FA+
Sbjct: 251 ALNQMQGQVMFSSDRGG--LRIEFAK 274
>gi|351695324|gb|EHA98242.1| U2 small nuclear ribonucleoprotein B'' [Heterocephalus glaber]
Length = 224
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 120 GGRSEVPLPPDA--SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 135 GNATTNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 187
Query: 178 ILCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + A A DALQG++
Sbjct: 188 -IAFVEFENDGQAGAARDALQGFK 210
>gi|363731244|ref|XP_003640940.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Gallus
gallus]
Length = 207
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 130 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 179
Query: 188 AHAATAMDALQGYR 201
A A DALQG++
Sbjct: 180 CQAGAARDALQGFK 193
>gi|194763787|ref|XP_001964014.1| GF21334 [Drosophila ananassae]
gi|190618939|gb|EDV34463.1| GF21334 [Drosophila ananassae]
Length = 216
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 188
Query: 188 AHAATAMDALQGYR 201
+ A +ALQG++
Sbjct: 189 LQSNAAKEALQGFK 202
>gi|840823|emb|CAA44752.1| U2-snRNP-specific b'' [Mus musculus]
Length = 123
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 117 GLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
G +VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 34 GTAAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD--- 86
Query: 176 PLILCFVDFVSPAHAATAMDALQGYRF 202
+ FV+F + A A DALQG++
Sbjct: 87 ---IAFVEFENDGQAGAARDALQGFKI 110
>gi|255710361|gb|ACU31000.1| U1 small nuclear ribonucleoprotein A [Ochlerotatus triseriatus]
Length = 202
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 125 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFATE 174
Query: 188 AHAATAMDALQGYR 201
+ A +ALQG++
Sbjct: 175 LQSGAAREALQGFK 188
>gi|90086371|dbj|BAE91738.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 58 GNTTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 110
Query: 178 ILCFVDFVSPAHAATAMDALQGYRF 202
+ FV+F + A A DALQG++
Sbjct: 111 -IAFVEFENDGQAGAARDALQGFKI 134
>gi|58394659|ref|XP_320869.2| AGAP011637-PA [Anopheles gambiae str. PEST]
gi|55235062|gb|EAA00418.2| AGAP011637-PA [Anopheles gambiae str. PEST]
Length = 216
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 116 LGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
+G + PP+ LF+ LP + + ++ +F F G+KEVRLV +RH
Sbjct: 127 VGATNNSATAEQPPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD--- 179
Query: 176 PLILCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + + A +ALQG++
Sbjct: 180 ---IAFVEFATELQSGAAREALQGFK 202
>gi|23956110|ref|NP_067310.1| U2 small nuclear ribonucleoprotein B'' [Mus musculus]
gi|52783420|sp|Q9CQI7.1|RU2B_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|12847289|dbj|BAB27510.1| unnamed protein product [Mus musculus]
gi|12851400|dbj|BAB29026.1| unnamed protein product [Mus musculus]
gi|20072417|gb|AAH26794.1| U2 small nuclear ribonucleoprotein B [Mus musculus]
gi|126035620|gb|ABN72533.1| U2 small nuclear ribonucleoprotein B [Mus spretus]
gi|148696479|gb|EDL28426.1| mCG19497, isoform CRA_c [Mus musculus]
Length = 225
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 117 GLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
G +VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GTAAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD--- 188
Query: 176 PLILCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + A A DALQG++
Sbjct: 189 ---IAFVEFENDGQAGAARDALQGFK 211
>gi|344255667|gb|EGW11771.1| U2 small nuclear ribonucleoprotein B'' [Cricetulus griseus]
Length = 180
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 98 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 147
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 148 EFENDGQAGAARDALQGFK 166
>gi|148696477|gb|EDL28424.1| mCG19497, isoform CRA_a [Mus musculus]
Length = 132
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 117 GLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
G +VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 43 GTAAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD--- 95
Query: 176 PLILCFVDFVSPAHAATAMDALQGYRF 202
+ FV+F + A A DALQG++
Sbjct: 96 ---IAFVEFENDGQAGAARDALQGFKI 119
>gi|449512588|ref|XP_004176179.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Taeniopygia
guttata]
Length = 221
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 11/82 (13%)
Query: 122 RSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
+++VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH +
Sbjct: 137 QNQVPDNPPNC--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IA 186
Query: 181 FVDFVSPAHAATAMDALQGYRF 202
FV+F + A A DALQG++
Sbjct: 187 FVEFENENQAGAARDALQGFKI 208
>gi|226372064|gb|ACO51657.1| U1 small nuclear ribonucleoprotein A [Rana catesbeiana]
Length = 279
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 202 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 251
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A ++LQG++ + + +++ FA+
Sbjct: 252 VQAGAARESLQGFKITQSN----SMKISFAK 278
>gi|195448090|ref|XP_002071505.1| GK25839 [Drosophila willistoni]
gi|194167590|gb|EDW82491.1| GK25839 [Drosophila willistoni]
Length = 216
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 188
Query: 188 AHAATAMDALQGYR 201
+ A +ALQG++
Sbjct: 189 LQSNAAKEALQGFK 202
>gi|449447844|ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis
sativus]
Length = 262
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLF+ GLP D RE+ ++FR G+ +L ++ G ++ F F + A T
Sbjct: 26 NTLFISGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFYNHQSAVT 80
Query: 193 AMDALQGYRFD 203
A+ AL G +FD
Sbjct: 81 ALHALNGVKFD 91
>gi|225443274|ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-like [Vitis vinifera]
Length = 328
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D T+F+ GLP D RE+ ++ R GY E V+ + HP G F F +P
Sbjct: 47 DEVRTIFISGLPEDVKERELQNLLRWLPGY-EASQVNFKGEHPMG------FALFSTPQL 99
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A A DALQ FD + + +
Sbjct: 100 AVAAKDALQEMVFDAESKSVLHTEM 124
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP +TLF+ L + + E+ +F G+K+++++ +E RH +CF++F
Sbjct: 221 PP--CNTLFIGNLGENINEEELRGLFSVQPGFKQMKILRQE-RH------TVCFIEFEDM 271
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFARYP-GARSGGGH 228
A +LQG SV +R+Q+++ P G R GH
Sbjct: 272 NTATNVHHSLQGAVIP--SSGSVGMRIQYSKNPFGKRKDSGH 311
>gi|195456672|ref|XP_002075236.1| GK16926 [Drosophila willistoni]
gi|194171321|gb|EDW86222.1| GK16926 [Drosophila willistoni]
Length = 806
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ +FV+ LPSDC++ ++ IF+PF K+VRLV K ++ G + ++++ P+ A
Sbjct: 628 TNKIFVKNLPSDCTKEQLTGIFKPFGTIKDVRLVFKFNKQFKG----IAYIEYELPSEAQ 683
Query: 192 TAMDALQGY 200
A+ G+
Sbjct: 684 KAVTQRDGF 692
>gi|123994687|gb|ABM84945.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
gi|261861662|dbj|BAI47353.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
Length = 225
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPNY--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 193 EFENDGQAGAARDALQGFK 211
>gi|449480586|ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Cucumis sativus]
Length = 262
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLF+ GLP D RE+ ++FR G+ +L ++ G ++ F F + A T
Sbjct: 26 NTLFISGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFYNHQSAVT 80
Query: 193 AMDALQGYRFD 203
A+ AL G +FD
Sbjct: 81 ALHALNGVKFD 91
>gi|386781069|ref|NP_001247823.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|402883260|ref|XP_003905142.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Papio
anubis]
gi|402883262|ref|XP_003905143.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Papio
anubis]
gi|402883264|ref|XP_003905144.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 3 [Papio
anubis]
gi|355563375|gb|EHH19937.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|380787253|gb|AFE65502.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|383414075|gb|AFH30251.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|384942630|gb|AFI34920.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
Length = 225
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNTTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + A A DALQG++
Sbjct: 189 -IAFVEFENDGQAGAARDALQGFK 211
>gi|147902061|ref|NP_001088194.1| small nuclear ribonucleoprotein polypeptide B [Xenopus laevis]
gi|54035240|gb|AAH84107.1| LOC495019 protein [Xenopus laevis]
Length = 223
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 123 SEVPLPPDA--SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
S+ P PD + LF+ LP + + ++ +F F G+KEVRLV RH +
Sbjct: 137 SQNPQVPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IA 188
Query: 181 FVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
FV+F + A +A DALQG++ + +++ FA+
Sbjct: 189 FVEFDNETEAGSARDALQGFKITPSN----AMKITFAK 222
>gi|224146679|ref|XP_002326095.1| predicted protein [Populus trichocarpa]
gi|222862970|gb|EEF00477.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 10/88 (11%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G ++ +PP+ + LF++ LP + + + +F+ + G++EVR++ + PG
Sbjct: 147 GNQSAQETVPPN--NILFIQNLPHETTSMMLQVLFQQYPGFREVRMIEAK---PG----- 196
Query: 179 LCFVDFVSPAHAATAMDALQGYRFDEHD 206
+ FV+F ++ AM ALQG++ +
Sbjct: 197 IAFVEFEDDVQSSMAMQALQGFKITPQN 224
>gi|213510744|ref|NP_001134742.1| U1 small nuclear ribonucleoprotein A [Salmo salar]
gi|209735590|gb|ACI68664.1| U1 small nuclear ribonucleoprotein A [Salmo salar]
Length = 281
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDND 253
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A +ALQG++ + + +++ FA+
Sbjct: 254 VQAGAAREALQGFKITQTN----AMKISFAK 280
>gi|354542538|ref|NP_001238897.1| U2 small nuclear ribonucleoprotein B'' [Canis lupus familiaris]
Length = 225
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 114 RALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
A G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 130 NAANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRH 187
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + A A DALQG++
Sbjct: 188 D------IAFVEFENDGQAGAARDALQGFK 211
>gi|301787297|ref|XP_002929064.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Ailuropoda
melanoleuca]
gi|410954385|ref|XP_003983845.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Felis
catus]
gi|410954387|ref|XP_003983846.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Felis
catus]
gi|281346668|gb|EFB22252.1| hypothetical protein PANDA_019153 [Ailuropoda melanoleuca]
Length = 225
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 114 RALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
A G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 130 NAANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRH 187
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + A A DALQG++
Sbjct: 188 D------IAFVEFENDGQAGAARDALQGFK 211
>gi|157819927|ref|NP_001102062.1| U2 small nuclear ribonucleoprotein B'' [Rattus norvegicus]
gi|354492046|ref|XP_003508163.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cricetulus
griseus]
gi|149041257|gb|EDL95190.1| rCG27500, isoform CRA_c [Rattus norvegicus]
gi|197245976|gb|AAI68760.1| Small nuclear ribonucleoprotein polypeptide B'' [Rattus norvegicus]
Length = 225
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 193 EFENDGQAGAARDALQGFK 211
>gi|355784710|gb|EHH65561.1| U2 small nuclear ribonucleoprotein B'' [Macaca fascicularis]
Length = 225
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 120 GGRSEVPLPPDA--SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNTTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + A A DALQG++
Sbjct: 189 -IAFVEFENDGQAGAARDALQGFK 211
>gi|403263452|ref|XP_003924046.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Saimiri
boliviensis boliviensis]
gi|197692169|dbj|BAG70048.1| small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|197692419|dbj|BAG70173.1| small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
Length = 225
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 193 EFENDGQAGAARDALQGFK 211
>gi|359718900|ref|NP_001240769.1| U2 small nuclear ribonucleoprotein B'' [Equus caballus]
gi|328908863|gb|AEB61099.1| u2 small nuclear ribonucleoprotein B''-like protein [Equus
caballus]
Length = 225
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 114 RALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
++ G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 130 NSVNTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRH 187
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + A A DALQG++
Sbjct: 188 D------IAFVEFENDGQAGAARDALQGFK 211
>gi|148696478|gb|EDL28425.1| mCG19497, isoform CRA_b [Mus musculus]
Length = 203
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 117 GLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
G +VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 114 GTAAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD--- 166
Query: 176 PLILCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + A A DALQG++
Sbjct: 167 ---IAFVEFENDGQAGAARDALQGFK 189
>gi|344279401|ref|XP_003411476.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Loxodonta
africana]
Length = 225
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNSTPSPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + A A DALQG++
Sbjct: 189 -IAFVEFENDGQAGAARDALQGFK 211
>gi|28207150|gb|AAO37215.1| hypothetical protein [Arabidopsis thaliana]
Length = 277
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + P F F
Sbjct: 32 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKP------FAFAVFSDLQS 85
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A M AL G FD ++ + L
Sbjct: 86 AVAVMHALNGMVFDLEKHSTLHIDL 110
>gi|444729539|gb|ELW69952.1| U2 small nuclear ribonucleoprotein B'' [Tupaia chinensis]
Length = 225
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 193 EFENDGQAGAARDALQGFK 211
>gi|296818279|ref|XP_002849476.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
gi|238839929|gb|EEQ29591.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
Length = 808
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
R++ P P S+TLFV L + ++ +FRP G+ ++ ++ G+ L + F
Sbjct: 571 RADEPEAPMESATLFVRNLNFITTDTGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGF 630
Query: 182 --VDFVSPAHAATAMDALQGYRFDEHD 206
V+F S A A A+ AL GY+ D+H+
Sbjct: 631 GFVEFKSRAQAEAALKALNGYKLDQHE 657
>gi|194743840|ref|XP_001954408.1| GF16747 [Drosophila ananassae]
gi|190627445|gb|EDV42969.1| GF16747 [Drosophila ananassae]
Length = 141
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 30 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFHTRAGAEAA 87
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
LQG RFD ++ RL+FA+
Sbjct: 88 KQDLQGVRFDPDMPQTI--RLEFAK 110
>gi|395858003|ref|XP_003801365.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Otolemur
garnettii]
Length = 225
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 193 EFENDGQAGAARDALQGFK 211
>gi|359358253|gb|AEV40671.1| SNF [Antheraea pernyi]
Length = 228
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 124 EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVD 183
V PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+
Sbjct: 147 NVEQPPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVE 196
Query: 184 FVSPAHAATAMDALQGYRF 202
F + +A A +ALQG++
Sbjct: 197 FGNEMQSAAAKEALQGFKI 215
>gi|114681082|ref|XP_514523.2| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 5 [Pan
troglodytes]
gi|114681084|ref|XP_001137830.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 4 [Pan
troglodytes]
gi|296200238|ref|XP_002747509.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 2
[Callithrix jacchus]
gi|296200240|ref|XP_002747510.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 3
[Callithrix jacchus]
Length = 225
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPNY--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 193 EFENDGQAGAARDALQGFK 211
>gi|145361708|ref|NP_850366.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|62321263|dbj|BAD94469.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|110739960|dbj|BAF01884.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254999|gb|AEC10093.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + P F F
Sbjct: 47 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKP------FAFAVFSDLQS 100
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A M AL G FD ++ + L
Sbjct: 101 AVAVMHALNGMVFDLEKHSTLHIDL 125
>gi|4507123|ref|NP_003083.1| U2 small nuclear ribonucleoprotein B'' [Homo sapiens]
gi|38149981|ref|NP_937863.1| U2 small nuclear ribonucleoprotein B'' [Homo sapiens]
gi|332238115|ref|XP_003268248.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1
[Nomascus leucogenys]
gi|332238117|ref|XP_003268249.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2
[Nomascus leucogenys]
gi|397478615|ref|XP_003810638.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Pan
paniscus]
gi|397478617|ref|XP_003810639.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Pan
paniscus]
gi|426391004|ref|XP_004061878.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1
[Gorilla gorilla gorilla]
gi|426391006|ref|XP_004061879.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2
[Gorilla gorilla gorilla]
gi|134095|sp|P08579.1|RU2B_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|340105|gb|AAA36796.1| U2 small nuclear ribonucleoprotein B'' [Homo sapiens]
gi|17390031|gb|AAH18022.1| Small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|22477822|gb|AAH36737.1| Small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|119630689|gb|EAX10284.1| small nuclear ribonucleoprotein polypeptide B'', isoform CRA_a
[Homo sapiens]
gi|119630690|gb|EAX10285.1| small nuclear ribonucleoprotein polypeptide B'', isoform CRA_a
[Homo sapiens]
gi|123979922|gb|ABM81790.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
gi|189066590|dbj|BAG35840.1| unnamed protein product [Homo sapiens]
gi|410226668|gb|JAA10553.1| small nuclear ribonucleoprotein polypeptide B [Pan troglodytes]
gi|410226670|gb|JAA10554.1| small nuclear ribonucleoprotein polypeptide B'' [Pan troglodytes]
gi|410263358|gb|JAA19645.1| small nuclear ribonucleoprotein polypeptide B'' [Pan troglodytes]
gi|410342435|gb|JAA40164.1| small nuclear ribonucleoprotein polypeptide B'' [Pan troglodytes]
Length = 225
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPNY--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 193 EFENDGQAGAARDALQGFK 211
>gi|403283665|ref|XP_003933231.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Saimiri
boliviensis boliviensis]
Length = 225
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPNY--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 193 EFENDGQAGAARDALQGFK 211
>gi|186507399|ref|NP_001118504.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330255001|gb|AEC10095.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 289
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + P F F
Sbjct: 47 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKP------FAFAVFSDLQS 100
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A M AL G FD ++ + L
Sbjct: 101 AVAVMHALNGMVFDLEKHSTLHIDL 125
>gi|149041255|gb|EDL95188.1| rCG27500, isoform CRA_a [Rattus norvegicus]
Length = 132
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + A A
Sbjct: 60 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENDGQAGAAR 111
Query: 195 DALQGYRF 202
DALQG++
Sbjct: 112 DALQGFKI 119
>gi|440804858|gb|ELR25722.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 287
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 17/139 (12%)
Query: 87 GGMPSRPVDDPRIVGIGGMDPGPSA-----KDRALGLGGGRSEVPLPPDASSTLFVEGLP 141
G+ P + P + G+ M P P A +DR L G+S V PP STLF+ L
Sbjct: 148 AGLAGYPFNPPSMYGLSSMGPVPDAYLLGGQDR-LPKPAGKSLVRFPP--GSTLFISNLG 204
Query: 142 SDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYR 201
+ S +E++ +F F G+ +L ++ I FV + + A++ LQG
Sbjct: 205 TASSEQEISEVFGAFQGFVRAQLYNRGHN-------INAFVQYKDYESSTQALNHLQGSV 257
Query: 202 FDEHDRDSVKLRLQFARYP 220
D+ +K +++A+ P
Sbjct: 258 LMSSDKGPMK--IEYAKNP 274
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TL++ G P D RE+ ++FRP+ GY++ L P G + FV F S A A
Sbjct: 24 TLWLSGFPLDVKHREIHNLFRPYRGYEDSIL------KPNG----VAFVTFTSHEAAVAA 73
Query: 194 MDALQGYRFDEHDRDSVKLRLQFARYPGAR 223
+ G FD D L+++FA+ R
Sbjct: 74 KSDITGLHFDPDGTDV--LKVEFAKQNSKR 101
>gi|297706381|ref|XP_002830019.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Pongo
abelii]
Length = 225
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPNY--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 193 EFENDGQAGAARDALQGFK 211
>gi|55732648|emb|CAH93023.1| hypothetical protein [Pongo abelii]
Length = 225
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPNY--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 193 EFENDGQAGAARDALQGFK 211
>gi|47028317|gb|AAT09091.1| small nuclear ribonucleoprotein [Bigelowiella natans]
Length = 227
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 30/190 (15%)
Query: 40 SYYTRDDDRGA---LRGMRDTDSLGA----SYDRY---LRSAQISSYSGGQSARHMSGGM 89
++ DD GA +RGM++ D G SY + + S + SY + + SG M
Sbjct: 56 AWIVFDDLSGATKSVRGMQNVDFFGKKMRLSYAKEKSDIISKRDGSYVPREKRKMNSGDM 115
Query: 90 PSRP-VDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRRE 148
P V V + P A+ E PP+ LF LP +++
Sbjct: 116 KIEPKVQKTTAVATAKGEGAP-----AMETDEPEEEDSSPPN--KILFARNLPPQATKKM 168
Query: 149 VAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRD 208
+ +F+ + G+KEVRLV G P I F++F +A A + LQ ++ +
Sbjct: 169 LETLFKQYDGFKEVRLVD-------GKPDI-AFIEFNDAQESALAKEGLQNFKITSQN-- 218
Query: 209 SVKLRLQFAR 218
++L FA+
Sbjct: 219 --AMKLTFAK 226
>gi|156088273|ref|XP_001611543.1| U2 small nuclear ribonucleoprotein B' [Babesia bovis T2Bo]
gi|154798797|gb|EDO07975.1| U2 small nuclear ribonucleoprotein B', putative [Babesia bovis]
Length = 285
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 14/85 (16%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFVEGLP S +V +F VG++E R+++ + F+DF + +A A
Sbjct: 214 TLFVEGLPEGVSLADVNAVFARSVGFQEARVIAARK---------VAFIDFDNEFNAGCA 264
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
M ALQ EH LR+ +A+
Sbjct: 265 MQALQ-----EHPMGDSTLRISYAK 284
>gi|428171290|gb|EKX40208.1| hypothetical protein GUITHDRAFT_75811, partial [Guillardia theta
CCMP2712]
Length = 209
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
LF+E LP D + +VA +F PF G+KEVRLV PG + FV++ S + A
Sbjct: 151 ILFLENLPLDITSDDVAAVFSPFPGFKEVRLVPS---RPG-----IAFVEYESDVQSGMA 202
Query: 194 MDALQ 198
M LQ
Sbjct: 203 MARLQ 207
>gi|298204782|emb|CBI25280.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D T+F+ GLP D RE+ ++ R GY E V+ + HP G F F +P
Sbjct: 47 DEVRTIFISGLPEDVKERELQNLLRWLPGY-EASQVNFKGEHPMG------FALFSTPQL 99
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A A DALQ FD + + +
Sbjct: 100 AVAAKDALQEMVFDAESKSVLHTEM 124
>gi|348581624|ref|XP_003476577.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cavia
porcellus]
Length = 224
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 142 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 191
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 192 EFENDGQAGAARDALQGFK 210
>gi|116175273|ref|NP_001070696.1| uncharacterized protein LOC768116 [Sus scrofa]
gi|426240670|ref|XP_004014217.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Ovis
aries]
gi|115371759|gb|ABI96204.1| RU2B [Sus scrofa]
Length = 225
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 193 EFENDGQAGAARDALQGFK 211
>gi|440893400|gb|ELR46188.1| U2 small nuclear ribonucleoprotein B'', partial [Bos grunniens
mutus]
Length = 233
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 11/80 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 151 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 200
Query: 183 DFVSPAHAATAMDALQGYRF 202
+F + A A DALQG++
Sbjct: 201 EFENDGQAGAARDALQGFKI 220
>gi|224134967|ref|XP_002327534.1| predicted protein [Populus trichocarpa]
gi|222836088|gb|EEE74509.1| predicted protein [Populus trichocarpa]
Length = 281
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLFV GLP D RE+ +IFR G+ +L ++ G ++ F F + A
Sbjct: 31 NTLFVSGLPDDVKAREIHNIFRRRPGFDSCQL-----KYTGRGNQVVAFATFFNHQSAIA 85
Query: 193 AMDALQGYRFDEHDRDSVKLRL 214
A+ +L G +FD ++ + L
Sbjct: 86 ALHSLNGVKFDPQSGSTLHIEL 107
>gi|125983292|ref|XP_001355411.1| GA18235 [Drosophila pseudoobscura pseudoobscura]
gi|195162057|ref|XP_002021872.1| GL14287 [Drosophila persimilis]
gi|54643726|gb|EAL32469.1| GA18235 [Drosophila pseudoobscura pseudoobscura]
gi|194103770|gb|EDW25813.1| GL14287 [Drosophila persimilis]
Length = 216
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 188
Query: 188 AHAATAMDALQGYR 201
+ A +ALQG++
Sbjct: 189 LQSNAAKEALQGFK 202
>gi|159470585|ref|XP_001693437.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282940|gb|EDP08691.1| predicted protein [Chlamydomonas reinhardtii]
Length = 233
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LFV+ LP + + +F+ F G++EVR+V E+R PG + FV++ + +
Sbjct: 158 NKILFVQNLPETSNEAMLGMLFQQFPGFREVRMV--EAR-PG-----IAFVEYENEMQSG 209
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQ 215
TAM LQG++ + ++ Q
Sbjct: 210 TAMQGLQGFKITPANAMNITFAKQ 233
>gi|149041256|gb|EDL95189.1| rCG27500, isoform CRA_b [Rattus norvegicus]
Length = 203
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 121 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 170
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 171 EFENDGQAGAARDALQGFK 189
>gi|195157804|ref|XP_002019784.1| GL12579 [Drosophila persimilis]
gi|194116375|gb|EDW38418.1| GL12579 [Drosophila persimilis]
Length = 632
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
TLFV GLP D RE+ +FR + GY+ +++ SK + P + FV F + A A
Sbjct: 469 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGK--TASP--VGFVTFHTRAGAE 524
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFAR 218
A LQG RFD ++ RL+FA+
Sbjct: 525 AAKQDLQGVRFDPDMPQTI--RLEFAK 549
>gi|145228995|ref|XP_001388806.1| multiple RNA-binding domain-containing protein 1 [Aspergillus niger
CBS 513.88]
gi|134054902|emb|CAK36914.1| unnamed protein product [Aspergillus niger]
gi|350638000|gb|EHA26356.1| multiple RNA-binding domain-containing protein [Aspergillus niger
ATCC 1015]
Length = 825
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVSPAH 189
++TLFV+ L + + +FRP G+ ++ +K + +HPG + FV+F S A
Sbjct: 596 TTTLFVKNLNFATTNQSFVDLFRPLDGFVSAKIKTKPDPKHPGQTLSMGFGFVEFRSKAQ 655
Query: 190 AATAMDALQGYRFDEHD 206
A +A+ A+ GY+ D+H+
Sbjct: 656 AQSALAAMNGYKLDQHE 672
>gi|342321005|gb|EGU12943.1| RNA binding protein [Rhodotorula glutinis ATCC 204091]
Length = 298
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 17/99 (17%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LFV+ LP D ++ + +FRPF EVR + PG + FV+F
Sbjct: 208 LPPN--KILFVQNLPDDTTKEGLEALFRPFPNLVEVRTI------PGRKN--IAFVEFAD 257
Query: 187 PAHAATAMDALQGYRFD-------EHDRDSVKLRLQFAR 218
+ A DAL +F + +K+++ FA+
Sbjct: 258 EQSSGVARDALHNTKFSGTTGAVMAQSEEGLKIKVTFAK 296
>gi|349605397|gb|AEQ00652.1| U2 small nuclear ribonucleoprotein B''-like protein, partial [Equus
caballus]
Length = 197
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 114 RALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
++ G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 102 NSVNTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRH 159
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + A A DALQG++
Sbjct: 160 D------IAFVEFENDGQAGAARDALQGFK 183
>gi|62857647|ref|NP_001016784.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
gi|60618430|gb|AAH90598.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
gi|89273875|emb|CAJ82017.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
Length = 282
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A ++LQG++ + S +++ FA+
Sbjct: 255 VQAGAARESLQGFKITQ----SNSMKISFAK 281
>gi|147902216|ref|NP_001085460.1| MGC80122 protein [Xenopus laevis]
gi|49257361|gb|AAH72799.1| MGC80122 protein [Xenopus laevis]
Length = 223
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 146 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 195
Query: 188 AHAATAMDALQGYR 201
A +A DALQG++
Sbjct: 196 TEAGSARDALQGFK 209
>gi|157103841|ref|XP_001648152.1| U1 small nuclear ribonucleoprotein A [Aedes aegypti]
gi|157133359|ref|XP_001656219.1| U1 small nuclear ribonucleoprotein A [Aedes aegypti]
gi|108869334|gb|EAT33559.1| AAEL014167-PA [Aedes aegypti]
gi|108881556|gb|EAT45781.1| AAEL002980-PA [Aedes aegypti]
Length = 216
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFATE 188
Query: 188 AHAATAMDALQGYR 201
+ A +ALQG++
Sbjct: 189 LQSGAAREALQGFK 202
>gi|122919626|pdb|2B0G|A Chain A, Solution Structure Of Drosophila Melanogaster Snf Rbd2
gi|134103993|pdb|2AYM|A Chain A, Solution Structure Of Drosophila Melanogaster Snf Rbd2
Length = 83
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 6 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 55
Query: 188 AHAATAMDALQGYR 201
+ A +ALQG++
Sbjct: 56 LQSNAAKEALQGFK 69
>gi|341895190|gb|EGT51125.1| CBN-MEC-8 protein [Caenorhabditis brenneri]
gi|341898355|gb|EGT54290.1| hypothetical protein CAEBREN_29517 [Caenorhabditis brenneri]
Length = 313
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A STLFV L ++ + ++ +F+ F G+ +RL +K + FV++ A
Sbjct: 227 ACSTLFVANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGS-------CVAFVEYSDLQKA 279
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGG 226
AM +LQG++ +DR LR+++AR A G
Sbjct: 280 TQAMMSLQGFQVSANDRGG--LRIEYARNKMADVNG 313
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESR--HPGGDPLILCFVDF 184
P TLFV GLP D RE+ +FR GY+ +++ SK + P G FV F
Sbjct: 27 PSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVG------FVTF 80
Query: 185 VSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGAR 223
++ A A LQG RFD ++L L + AR
Sbjct: 81 LTQQDAQDAKKLLQGVRFDPECAQVLRLELAKSNTKVAR 119
>gi|291389004|ref|XP_002711008.1| PREDICTED: small nuclear ribonucleoprotein polypeptide B''
[Oryctolagus cuniculus]
Length = 225
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 193 EFENDGQAGAARDALQGFK 211
>gi|58331942|ref|NP_001011120.1| small nuclear ribonucleoprotein polypeptide B [Xenopus (Silurana)
tropicalis]
gi|54038268|gb|AAH84519.1| hypothetical LOC496533 [Xenopus (Silurana) tropicalis]
gi|89268683|emb|CAJ82680.1| small nuclear ribonucleoprotein polypeptide B [Xenopus (Silurana)
tropicalis]
Length = 223
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 146 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 195
Query: 188 AHAATAMDALQGYR 201
A A DALQG++
Sbjct: 196 TEAGAARDALQGFK 209
>gi|170070159|ref|XP_001869484.1| U1 small nuclear ribonucleoprotein A [Culex quinquefasciatus]
gi|167866053|gb|EDS29436.1| U1 small nuclear ribonucleoprotein A [Culex quinquefasciatus]
Length = 216
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFATE 188
Query: 188 AHAATAMDALQGYR 201
+ A +ALQG++
Sbjct: 189 LQSGAAREALQGFK 202
>gi|2673920|gb|AAB88654.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 158
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + G P F F
Sbjct: 32 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSD----GAKP--FAFAVFSDLQS 85
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A M AL G FD ++ + L
Sbjct: 86 AVAVMHALNGMVFDLEKHSTLHIDL 110
>gi|148222234|ref|NP_001080089.1| U1 small nuclear ribonucleoprotein A [Xenopus laevis]
gi|27924189|gb|AAH44979.1| Snf protein [Xenopus laevis]
Length = 282
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A ++LQG++ + + +++ FA+
Sbjct: 255 VQAGAARESLQGFKITQSN----SMKISFAK 281
>gi|355721048|gb|AES07135.1| small nuclear ribonucleoprotein polypeptide B [Mustela putorius
furo]
Length = 99
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 114 RALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
A G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 4 NAANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRH 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + A A DALQG++
Sbjct: 62 D------IAFVEFENDGQAGAARDALQGFK 85
>gi|213405979|ref|XP_002173761.1| cell wall integrity protein scw1 [Schizosaccharomyces japonicus
yFS275]
gi|212001808|gb|EEB07468.1| cell wall integrity protein scw1 [Schizosaccharomyces japonicus
yFS275]
Length = 565
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+T++V LP S E+ +F GYK + +K G P+ CFV+F S A+A
Sbjct: 438 NTIYVGNLPPSTSEDELKALFSTQPGYKRLCFRTK-----GNGPM--CFVEFESIAYATE 490
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARS-GGGHRGKR 232
A+ ALQG SVK +RL F++ P G RS H R
Sbjct: 491 ALKALQGVCLS----SSVKGGIRLSFSKNPLGVRSPSSSHSNNR 530
>gi|159475870|ref|XP_001696037.1| hypothetical protein CHLREDRAFT_104778 [Chlamydomonas reinhardtii]
gi|158275208|gb|EDP00986.1| predicted protein [Chlamydomonas reinhardtii]
Length = 269
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D T+FV G P D RE+ ++ R GY+ ++ + G F F S AH
Sbjct: 5 DEVRTVFVTGFPIDVKERELNNLLRFLPGYEASQMNYGKGSAQG-------FALFTSGAH 57
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A D LQ RFDE+ LR + AR
Sbjct: 58 ARAACDQLQHVRFDENS----SLRAEMAR 82
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLFV L E+ +F G+++++L+ G L FV+F A T
Sbjct: 168 NTLFVGNLSDSVDENELRSLFSGSPGFRQLKLMR-------GPKATLGFVEFDDTGSAIT 220
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYPGAR 223
A +A Q + DR + R+QF++ P R
Sbjct: 221 AHNAQQNAMLNSSDRGPI--RVQFSKNPFGR 249
>gi|300796380|ref|NP_001179481.1| U2 small nuclear ribonucleoprotein B'' [Bos taurus]
gi|426240672|ref|XP_004014218.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Ovis
aries]
gi|296481542|tpg|DAA23657.1| TPA: small nuclear ribonucleoprotein polypeptide B'' [Bos taurus]
Length = 218
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 136 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 185
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 186 EFENDGQAGAARDALQGFK 204
>gi|449513226|ref|XP_002193869.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Taeniopygia
guttata]
Length = 322
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 245 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 294
Query: 188 AHAATAMDALQGYRF 202
A A DALQG++
Sbjct: 295 NQAGAARDALQGFKI 309
>gi|389742376|gb|EIM83563.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 274
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP ++ ++ +F + EVRL+ + + FV++V
Sbjct: 196 LPPN--KILFLQNLPESVTKPQLEALFTQYPNLHEVRLIPTKKD--------IAFVEYVD 245
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DAL Y+ D + K+++ FAR
Sbjct: 246 EGSATVAKDALHNYKLDGEN----KIKITFAR 273
>gi|119630691|gb|EAX10286.1| small nuclear ribonucleoprotein polypeptide B'', isoform CRA_b
[Homo sapiens]
Length = 242
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 148 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFEND 197
Query: 188 AHAATAMDALQGYR 201
A A DALQG++
Sbjct: 198 GQAGAARDALQGFK 211
>gi|225442319|ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263499 [Vitis vinifera]
gi|297743102|emb|CBI35969.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP STLF+ L C+ E+ + + G+ +++ +K GG P+ F DF
Sbjct: 186 LPP--CSTLFIANLGPTCTEDELKQVLSQYPGFNVLKMRAK-----GGMPV--AFADFEE 236
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A AMDALQG DR + L++AR
Sbjct: 237 IEQANKAMDALQGSMLASSDRGG--MHLEYAR 266
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLFV GLP D RE+ ++FR G+ +L ++ G ++ F F + A
Sbjct: 21 NTLFVSGLPDDVKPREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFFNHQTAVA 75
Query: 193 AMDALQGYRFD 203
A+ AL G +FD
Sbjct: 76 ALHALNGVKFD 86
>gi|442760027|gb|JAA72172.1| Putative spliceosomal protein snrnp-u1a/u2b [Ixodes ricinus]
Length = 239
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 160 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 209
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFA 217
++ A +ALQG++ + LR + A
Sbjct: 210 IQSSAAKEALQGFKITPIHAMKIHLRQEVA 239
>gi|1173326|sp|P45429.1|SNRPA_XENLA RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|65181|emb|CAA41021.1| U1 A protein [Xenopus laevis]
Length = 282
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A ++LQG++ + S +++ FA+
Sbjct: 255 VQAGAARESLQGFKITQ----SNSMKISFAK 281
>gi|402579243|gb|EJW73195.1| hypothetical protein WUBG_15898, partial [Wuchereria bancrofti]
Length = 419
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D +RE+ +FR GY+ L +S+ GG + FV F S A A
Sbjct: 40 TLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKD-GGIASPVGFVTFSSAEDAEIA 98
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
M ALQ FD K+RL+ A+
Sbjct: 99 MKALQSALFDPITGH--KIRLEKAK 121
>gi|326485490|gb|EGE09500.1| pre-rRNA processing protein Mrd1 [Trichophyton equinum CBS 127.97]
Length = 835
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
+++ P P S+TLFV L + ++ +FRP G+ ++ ++ G+ L + F
Sbjct: 598 KADEPEAPMESATLFVRNLNFTTTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGF 657
Query: 182 --VDFVSPAHAATAMDALQGYRFDEHD 206
V+F S A A A+ AL GY+ D+H+
Sbjct: 658 GFVEFKSRAQAEAALKALNGYKLDQHE 684
>gi|145235395|ref|XP_001390346.1| RNA binding protein [Aspergillus niger CBS 513.88]
gi|134058028|emb|CAK38257.1| unnamed protein product [Aspergillus niger]
Length = 611
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A
Sbjct: 406 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGP-------MCFVEFDDVGTAGK 458
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A++ L G + +S+K +RL F++ P G RSG
Sbjct: 459 ALNELYGVKLS----NSIKTGIRLSFSKNPLGVRSG 490
>gi|350632868|gb|EHA21235.1| hypothetical protein ASPNIDRAFT_54716 [Aspergillus niger ATCC 1015]
Length = 611
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A
Sbjct: 406 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGP-------MCFVEFDDVGTAGK 458
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A++ L G + +S+K +RL F++ P G RSG
Sbjct: 459 ALNELYGVKLS----NSIKTGIRLSFSKNPLGVRSG 490
>gi|145331097|ref|NP_001078040.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|110737249|dbj|BAF00572.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330255000|gb|AEC10094.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 302
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + P F F
Sbjct: 47 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKP------FAFAVFSDLQS 100
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A M AL G FD ++ + L
Sbjct: 101 AVAVMHALNGMVFDLEKHSTLHIDL 125
>gi|413953432|gb|AFW86081.1| hypothetical protein ZEAMMB73_802063, partial [Zea mays]
Length = 158
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 197 LQGYRFDEHDRDSVKLRLQFARY--PGARSGGGHRGKR 232
GY+FDEHDR+S LRLQFAR+ P SG G RG+R
Sbjct: 121 FSGYKFDEHDRNSPNLRLQFARFAGPKGNSGPGGRGRR 158
>gi|356526031|ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783764 [Glycine max]
Length = 264
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLF+ L +C+ E+ F + G+ V++ S+ GG P + FVDF AA
Sbjct: 182 STLFIANLGPNCTEDELKQAFSAYTGFNMVKMRSR-----GGMP--VAFVDFEETHQAAK 234
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
M+ LQG DR + +++AR
Sbjct: 235 VMEELQGSLLPSSDRGG--MHIEYAR 258
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLFV GLP D RE+ ++FR G+ +L ++ G ++ F F + A
Sbjct: 21 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQSAMA 75
Query: 193 AMDALQGYRFD 203
A+ AL G +FD
Sbjct: 76 ALHALNGVKFD 86
>gi|195348983|ref|XP_002041026.1| GM15269 [Drosophila sechellia]
gi|194122631|gb|EDW44674.1| GM15269 [Drosophila sechellia]
Length = 617
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
TLFV GLP D RE+ +FR + GY+ +++ SK + P + FV F + A A
Sbjct: 454 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGK--TASP--VGFVTFHTRAGAE 509
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFAR 218
A LQG RFD ++ RL+FA+
Sbjct: 510 AAKQDLQGVRFDPDMPQTI--RLEFAK 534
>gi|115894424|ref|XP_001198644.1| PREDICTED: cell wall integrity protein scw1-like
[Strongylocentrotus purpuratus]
Length = 154
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A STLF+ L ++ S +E+ R G+ +R+ +K GG P CFV+F + A
Sbjct: 45 ACSTLFLANLGTNTSEQELRDTLRCLPGFNRLRMHNK-----GGAPC--CFVEFQNVGFA 97
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A+ LQG DR LR++FA+
Sbjct: 98 MQALAHLQGLMLKSSDRGG--LRVEFAK 123
>gi|297716585|ref|XP_002834591.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Pongo abelii]
Length = 99
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 10 GNSTPNPQIPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 62
Query: 178 ILCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + A A DALQG++
Sbjct: 63 -IAFVEFENDGQAGAARDALQGFK 85
>gi|302660785|ref|XP_003022068.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
gi|291185995|gb|EFE41450.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
Length = 968
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
+++ P P S+TLFV L + ++ +FRP G+ ++ ++ G+ L + F
Sbjct: 731 KADEPEAPMESATLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGF 790
Query: 182 --VDFVSPAHAATAMDALQGYRFDEHD 206
V+F S A A A+ AL GY+ D+H+
Sbjct: 791 GFVEFKSRAQAEAALKALNGYKLDQHE 817
>gi|28207154|gb|AAO37217.1| hypothetical protein [Arabidopsis thaliana]
gi|61742673|gb|AAX55157.1| hypothetical protein At2g42245 [Arabidopsis thaliana]
Length = 287
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + P F F
Sbjct: 32 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKP------FAFAVFSDLQS 85
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A M AL G FD ++ + L
Sbjct: 86 AVAVMHALNGMVFDLEKHSTLHIDL 110
>gi|195055450|ref|XP_001994632.1| GH15012 [Drosophila grimshawi]
gi|193892395|gb|EDV91261.1| GH15012 [Drosophila grimshawi]
Length = 193
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 30 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFHTRAGAEAA 87
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
LQG RFD ++ RL+FA+
Sbjct: 88 KQDLQGVRFDPDMPQTI--RLEFAK 110
>gi|358374685|dbj|GAA91275.1| RNA binding protein [Aspergillus kawachii IFO 4308]
Length = 609
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A
Sbjct: 404 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGP-------MCFVEFDDVGTAGK 456
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A++ L G + +S+K +RL F++ P G RSG
Sbjct: 457 ALNELYGVKLS----NSIKTGIRLSFSKNPLGVRSG 488
>gi|303388669|ref|XP_003072568.1| U1 small nuclear ribonucleoprotein A [Encephalitozoon intestinalis
ATCC 50506]
gi|303301709|gb|ADM11208.1| U1 small nuclear ribonucleoprotein A [Encephalitozoon intestinalis
ATCC 50506]
Length = 173
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 22/140 (15%)
Query: 60 LGASYDRYLRSAQISSYSG----GQSARHMSGGMPSRPVD--DPRIVGIGGMDPGPSAKD 113
LG R R ++I + GQ+ H+ G + + +D + R + P+ +D
Sbjct: 28 LGLFVSRLSRVSKIKMSNKPGLLGQAFVHLDGEITNEILDSLNGRFFLGDVILACPARED 87
Query: 114 RALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPG 173
+ +G R+ V ++ +L V G+PS +R E+ IF+ F G + VRL+ +S
Sbjct: 88 --MCIGKRRTIV-----STRSLLVTGIPSGMTREELVDIFKGFEGLEAVRLIKVKS---- 136
Query: 174 GDPLILCFVDFVSPAHAATA 193
L FVDF SP A+TA
Sbjct: 137 -----LAFVDFSSPQEASTA 151
>gi|225710606|gb|ACO11149.1| U1 small nuclear ribonucleoprotein A [Caligus rogercresseyi]
Length = 217
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 140 PPN--QILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 189
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+A A ++LQG++ + +++ FA+
Sbjct: 190 VQSAAARESLQGFKITPN----ASMKISFAK 216
>gi|432890232|ref|XP_004075429.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 1
[Oryzias latipes]
gi|432890234|ref|XP_004075430.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 2
[Oryzias latipes]
Length = 272
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 195 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 244
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A D+LQG++ + + +++ FA+
Sbjct: 245 VQAGAARDSLQGFKITQ----THAMKISFAK 271
>gi|449513275|ref|XP_004175808.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Taeniopygia guttata]
Length = 99
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 11/81 (13%)
Query: 122 RSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
+++VP PP+ LF+ LP + + ++ +F F G+KEVRLV PG +
Sbjct: 15 QNQVPDNPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV------PGRQD--IA 64
Query: 181 FVDFVSPAHAATAMDALQGYR 201
FV+F + A A DALQG++
Sbjct: 65 FVEFENENQAGAARDALQGFK 85
>gi|442619711|ref|NP_732284.5| couch potato, isoform N [Drosophila melanogaster]
gi|442619725|ref|NP_732283.5| couch potato, isoform U [Drosophila melanogaster]
gi|442619729|ref|NP_001262691.1| couch potato, isoform W [Drosophila melanogaster]
gi|442619731|ref|NP_001262692.1| couch potato, isoform X [Drosophila melanogaster]
gi|442619733|ref|NP_524844.6| couch potato, isoform Y [Drosophila melanogaster]
gi|440217570|gb|AAF55484.6| couch potato, isoform N [Drosophila melanogaster]
gi|440217577|gb|AAF55485.6| couch potato, isoform U [Drosophila melanogaster]
gi|440217579|gb|AGB96071.1| couch potato, isoform W [Drosophila melanogaster]
gi|440217580|gb|AGB96072.1| couch potato, isoform X [Drosophila melanogaster]
gi|440217581|gb|AAN13754.5| couch potato, isoform Y [Drosophila melanogaster]
Length = 606
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
TLFV GLP D RE+ +FR + GY+ +++ SK + P + FV F + A A
Sbjct: 443 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGK--TASP--VGFVTFHTRAGAE 498
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFAR 218
A LQG RFD ++ RL+FA+
Sbjct: 499 AAKQDLQGVRFDPDMPQTI--RLEFAK 523
>gi|1345457|emb|CAA78696.1| Cpo 61.1 [Drosophila melanogaster]
Length = 615
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
TLFV GLP D RE+ +FR + GY+ +++ SK + P + FV F + A A
Sbjct: 452 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGK--TASP--VGFVTFHTRAGAE 507
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFAR 218
A LQG RFD ++ RL+FA+
Sbjct: 508 AAKQDLQGVRFDPDMPQTI--RLEFAK 532
>gi|347839385|emb|CCD53957.1| hypothetical protein [Botryotinia fuckeliana]
Length = 545
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 349 NTLYVGNLPIDTSEDELKSMFSKQRGYKRLCFRTKQNGP-------MCFVEFEDTSFATK 401
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSGGG 227
A+ L G+ H+ +RL F++ P G RSG G
Sbjct: 402 ALHELYGHPL--HNSIKGGIRLSFSKNPLGVRSGPG 435
>gi|302507734|ref|XP_003015828.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
gi|291179396|gb|EFE35183.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
Length = 826
Score = 46.2 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
+++ P P S+TLFV L + ++ +FRP G+ ++ ++ G+ L + F
Sbjct: 589 KADEPEAPMESATLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGF 648
Query: 182 --VDFVSPAHAATAMDALQGYRFDEHD 206
V+F S A A A+ AL GY+ D+H+
Sbjct: 649 GFVEFKSRAQAEAALKALNGYKLDQHE 675
>gi|315041593|ref|XP_003170173.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
gi|311345207|gb|EFR04410.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
Length = 799
Score = 46.2 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
+++ P P S+TLFV L + ++ +FRP G+ ++ ++ G+ L + F
Sbjct: 562 KADEPEAPMESATLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGF 621
Query: 182 --VDFVSPAHAATAMDALQGYRFDEHD 206
V+F S A A A+ AL GY+ D+H+
Sbjct: 622 GFVEFKSRAQAEAALKALNGYKLDQHE 648
>gi|336275323|ref|XP_003352414.1| hypothetical protein SMAC_01248 [Sordaria macrospora k-hell]
gi|380094302|emb|CCC07681.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 575
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK RL + ++H G +CFV+F + A
Sbjct: 392 NTLYVGNLPIDTSEEELKAVFSKVRGYK--RLCYR-TKHNG----PMCFVEFEDVSFATK 444
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L G+ + +RL F++ P G R+G
Sbjct: 445 ALNELYGHTLSNSRKGG--MRLSFSKNPLGVRTG 476
>gi|154303210|ref|XP_001552013.1| hypothetical protein BC1G_09625 [Botryotinia fuckeliana B05.10]
Length = 266
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 70 NTLYVGNLPIDTSEDELKSMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 122
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSGGG 227
A+ L G+ H+ +RL F++ P G RSG G
Sbjct: 123 ALHELYGHPL--HNSIKGGIRLSFSKNPLGVRSGPG 156
>gi|440355222|gb|AGC00413.1| SNF [Antheraea pernyi]
Length = 222
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 10/78 (12%)
Query: 124 EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVD 183
V PP+ LF+ LP S ++ +F F G+KEVRLV +RH + FV+
Sbjct: 141 NVEQPPN--QILFLTNLPDGTSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVE 190
Query: 184 FVSPAHAATAMDALQGYR 201
F + +A A +ALQG++
Sbjct: 191 FGNEMQSAAAKEALQGFK 208
>gi|85114567|ref|XP_964717.1| hypothetical protein NCU00556 [Neurospora crassa OR74A]
gi|28926509|gb|EAA35481.1| hypothetical protein NCU00556 [Neurospora crassa OR74A]
Length = 530
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK RL + ++H G +CFV+F + A
Sbjct: 347 NTLYVGNLPIDTSEEELKAVFSKVRGYK--RLCYR-TKHNG----PMCFVEFEDVSFATK 399
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L G+ + +RL F++ P G R+G
Sbjct: 400 ALNELYGHTLSNSRKGG--MRLSFSKNPLGVRTG 431
>gi|358372076|dbj|GAA88681.1| pre-rRNA processing protein Mrd1 [Aspergillus kawachii IFO 4308]
Length = 825
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVSPAH 189
++TLFV+ L + + +FRP G+ ++ +K + +HPG + FV+F S A
Sbjct: 596 TTTLFVKNLNFATTTQSFVDLFRPLDGFVSAKIKTKPDPKHPGQTLSMGFGFVEFRSKAQ 655
Query: 190 AATAMDALQGYRFDEHD 206
A +A+ A+ GY+ D+H+
Sbjct: 656 AQSALAAMNGYKLDQHE 672
>gi|336465288|gb|EGO53528.1| hypothetical protein NEUTE1DRAFT_92899 [Neurospora tetrasperma FGSC
2508]
gi|350295585|gb|EGZ76562.1| hypothetical protein NEUTE2DRAFT_98501 [Neurospora tetrasperma FGSC
2509]
Length = 530
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK RL + ++H G +CFV+F + A
Sbjct: 347 NTLYVGNLPIDTSEEELKAVFSKVRGYK--RLCYR-TKHNG----PMCFVEFEDVSFATK 399
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L G+ + +RL F++ P G R+G
Sbjct: 400 ALNELYGHTLSNSRKGG--MRLSFSKNPLGVRTG 431
>gi|124507237|ref|XP_001352215.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
falciparum 3D7]
gi|23505245|emb|CAD52025.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
falciparum 3D7]
Length = 193
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TL V+ LP + ++ + +F + G+ EVR + PG + + FVDF + HA +
Sbjct: 122 TLLVQNLPDEINKNALEILFNQYPGFYEVRYI------PGKN---IAFVDFTAQEHAEIS 172
Query: 194 MDALQGYRFDEH 205
M LQ ++ H
Sbjct: 173 MTGLQNFKITPH 184
>gi|17508419|ref|NP_492508.1| Protein MEC-8 [Caenorhabditis elegans]
gi|1369981|emb|CAA64867.1| mec-8 [Caenorhabditis elegans]
gi|3877217|emb|CAB03111.1| Protein MEC-8 [Caenorhabditis elegans]
Length = 312
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A STLFV L ++ + + +F+ F G+ +RL +K + FV++ A
Sbjct: 226 ACSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGS-------CVAFVEYSDLQKA 278
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGG 226
AM +LQG++ +DR LR+++AR A G
Sbjct: 279 TQAMISLQGFQITANDRGG--LRIEYARNKMADVNG 312
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESR--HPGGDPLILCFVDF 184
P TLFV GLP D RE+ +FR GY+ +++ SK + P G FV F
Sbjct: 27 PSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVG------FVTF 80
Query: 185 VSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
+S A A LQG RFD ++L L
Sbjct: 81 LSQQDAQDARKMLQGVRFDPECAQVLRLEL 110
>gi|336365379|gb|EGN93730.1| hypothetical protein SERLA73DRAFT_189480 [Serpula lacrymans var.
lacrymans S7.3]
gi|336377939|gb|EGO19099.1| hypothetical protein SERLADRAFT_480314 [Serpula lacrymans var.
lacrymans S7.9]
Length = 262
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP + ++ ++ +F + EVRL+ + + FV+++
Sbjct: 184 LPPN--KILFLQNLPENVTKDQLMALFSQYPNLYEVRLIPTKKD--------IAFVEYID 233
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DAL Y+ D + K+++ FAR
Sbjct: 234 EGSAGVAKDALHNYKLDGEN----KIKITFAR 261
>gi|308494202|ref|XP_003109290.1| CRE-MEC-8 protein [Caenorhabditis remanei]
gi|308246703|gb|EFO90655.1| CRE-MEC-8 protein [Caenorhabditis remanei]
Length = 305
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A STLFV L ++ + ++ +F+ F G+ +RL +K + FV++ A
Sbjct: 219 ACSTLFVANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGS-------CVAFVEYSDLHKA 271
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGG 226
AM +LQG++ +DR LR+++AR A G
Sbjct: 272 TQAMMSLQGFQVSANDRGG--LRIEYARNKMADVNG 305
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 118 LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESR--HPG 173
L SEV P TLFV GLP D RE+ +FR GY+ +++ SK + P
Sbjct: 17 LNSVSSEVT-NPSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPV 75
Query: 174 GDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
G FV F++ A A LQG RFD ++L L
Sbjct: 76 G------FVTFLTQQDAQDARKMLQGVRFDPECAQVLRLEL 110
>gi|307136276|gb|ADN34103.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 113
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLF+ GLP D RE+ ++FR G+ +L ++ G ++ F F + A T
Sbjct: 26 NTLFISGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFYNHQSAVT 80
Query: 193 AMDALQGYRFD 203
A+ AL G +FD
Sbjct: 81 ALHALNGVKFD 91
>gi|12850013|dbj|BAB28565.1| unnamed protein product [Mus musculus]
Length = 225
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 117 GLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
G +VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GTAAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD--- 188
Query: 176 PLILCFVDFVSPAHAATAMDALQGYR 201
+ FV+F A A DALQG++
Sbjct: 189 ---IAFVEFEYDGQAGAARDALQGFK 211
>gi|387915158|gb|AFK11188.1| RNA binding protein with multiple splicing 2 [Callorhinchus milii]
Length = 180
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 143 DCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRF 202
D RE+ +FRPF GY E L+ S+ P G FV F S A A +AL G RF
Sbjct: 2 DIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRTGAEAAKNALNGIRF 54
Query: 203 DEHDRDSVKLRLQFAR 218
D + + LRL+FA+
Sbjct: 55 DPENPQT--LRLEFAK 68
>gi|1370048|emb|CAA64866.1| mec-8 [Caenorhabditis elegans]
Length = 312
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A STLFV L ++ + + +F+ F G+ +RL +K + FV++ A
Sbjct: 226 ACSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGS-------CVAFVEYSDLQKA 278
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGG 226
AM +LQG++ +DR LR+++AR A G
Sbjct: 279 TQAMISLQGFQITANDRGG--LRIEYARNKMADVNG 312
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESR--HPGGDPLILCFVDF 184
P TLFV GLP D RE+ +FR GY+ +++ SK + P G FV F
Sbjct: 27 PSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVG------FVTF 80
Query: 185 VSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
+S A A LQG RFD ++L L
Sbjct: 81 LSQQDAQDARKMLQGVRFDPECAQVLRLEL 110
>gi|403373310|gb|EJY86574.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 303
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 11/91 (12%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFV--GYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
++++ LF+EGL + IF V G+KEVR ++++ + FV++
Sbjct: 221 ESNNLLFIEGLSKRTPTSILNEIFSQAVIGGFKEVRHIAEKE---------VAFVEYEDD 271
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A+ AM+ALQGY+ E + ++ L + FA+
Sbjct: 272 HVASIAMNALQGYQIKESNGETTVLSISFAK 302
>gi|327298413|ref|XP_003233900.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
gi|326464078|gb|EGD89531.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
Length = 798
Score = 46.2 bits (108), Expect = 0.011, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
+++ P P S+TLFV L + ++ +FRP G+ ++ ++ G+ L + F
Sbjct: 561 KADEPEAPMESATLFVRNLNFVTTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGF 620
Query: 182 --VDFVSPAHAATAMDALQGYRFDEHD 206
V+F S A A A+ AL GY+ D+H+
Sbjct: 621 GFVEFKSRAQAEAALKALNGYKLDQHE 647
>gi|406607411|emb|CCH41202.1| Multiple RNA-binding domain-containing protein 1 [Wickerhamomyces
ciferrii]
Length = 861
Score = 46.2 bits (108), Expect = 0.011, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
SS + V+ LP + SR++V +F F K VR+ K + G FV+F+ P A
Sbjct: 734 SSKIIVKNLPFEASRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLIPKEAQ 789
Query: 192 TAMDALQG 199
+AMD LQG
Sbjct: 790 SAMDQLQG 797
>gi|403411353|emb|CCL98053.1| predicted protein [Fibroporia radiculosa]
Length = 271
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP S+ ++ +F + EVRL+ + + FV+++
Sbjct: 193 LPPN--KILFLQNLPESVSKDQLMALFSQYPNLHEVRLIPTKKD--------IAFVEYMD 242
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DAL Y+ D + K+++ FAR
Sbjct: 243 EGSATVAKDALHNYKLDGEN----KIKITFAR 270
>gi|168036913|ref|XP_001770950.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677814|gb|EDQ64280.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+ TLF+ GLP D RE+ ++FR F GY+ +L + G I+ F F A
Sbjct: 13 EEVKTLFLSGLPDDIKEREIYNLFRNFEGYESCQL-----KFSGRGFQIVAFAVFTDQAT 67
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A + L G +FD + L ++ AR
Sbjct: 68 ALKAKEELNGLKFD--PQTGAVLHIELAR 94
>gi|444319050|ref|XP_004180182.1| hypothetical protein TBLA_0D01550 [Tetrapisispora blattae CBS 6284]
gi|387513224|emb|CCH60663.1| hypothetical protein TBLA_0D01550 [Tetrapisispora blattae CBS 6284]
Length = 420
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
+++ LFV P D E+ IF PF KEV++++ FV+F P A
Sbjct: 105 STTRLFVRPFPFDVQESELNEIFAPFGAMKEVKILNG-----------FAFVEFEEPESA 153
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARY 219
+ A++ + G F + + + +L RY
Sbjct: 154 SKAIEEVNGKTFADQPLEVLFSKLPAKRY 182
>gi|260827881|ref|XP_002608892.1| hypothetical protein BRAFLDRAFT_124249 [Branchiostoma floridae]
gi|229294246|gb|EEN64902.1| hypothetical protein BRAFLDRAFT_124249 [Branchiostoma floridae]
Length = 256
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + +
Sbjct: 181 NNILFLTNLPEETTEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNEMQSG 232
Query: 192 TAMDALQGYR 201
A DALQG++
Sbjct: 233 AARDALQGFK 242
>gi|242014736|ref|XP_002428041.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512560|gb|EEB15303.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 363
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 118 LGGGRSEVPLPPDASS---TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGG 174
+ RS+ P+ S TLFV GLP D RE+ +FR + GY E L+ S++ G
Sbjct: 3 IASKRSQTKKKPEIYSDVRTLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GK 60
Query: 175 DPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ FV F + A A A LQG RFD ++ RL+FA+
Sbjct: 61 TASPVGFVTFNTRAGAEAAKQDLQGVRFDPDLPQTI--RLEFAK 102
>gi|225719260|gb|ACO15476.1| U1 small nuclear ribonucleoprotein A [Caligus clemensi]
Length = 217
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 140 PPN--QILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 189
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+A A ++LQG++ + +++ FA+
Sbjct: 190 VQSAAARESLQGFKITPN----ASMKISFAK 216
>gi|431894149|gb|ELK03949.1| U2 small nuclear ribonucleoprotein B'' [Pteropus alecto]
Length = 291
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 205 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 254
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A A DALQG++
Sbjct: 255 EFENDGQAGAARDALQGFK 273
>gi|299742799|ref|XP_001832784.2| RNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298405354|gb|EAU89029.2| RNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 257
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LFV+ LP ++ ++ +F + EVRL+ + + FV+F+
Sbjct: 179 LPPN--KILFVQNLPESVTKDQLTTLFSQYPNLYEVRLIPTKKD--------IAFVEFLD 228
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A + A DAL ++ D + K+++ FAR
Sbjct: 229 EASSGVAKDALHNFKIDGEN----KIKITFAR 256
>gi|225713086|gb|ACO12389.1| U1 small nuclear ribonucleoprotein A [Lepeophtheirus salmonis]
Length = 217
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 140 PPN--QILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 189
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+A A ++LQG++ + +++ FA+
Sbjct: 190 VQSAAARESLQGFKITPN----ASMKISFAK 216
>gi|115433500|ref|XP_001216887.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189739|gb|EAU31439.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 599
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A
Sbjct: 404 NTLYVGNLPPDASEEELKALFIKQRGYKRLCFRNKQNGP-------MCFVEFEDVGTAGK 456
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARS 224
+ L GYR +SVK +RL F++ P G RS
Sbjct: 457 TLHELYGYRLS----NSVKTGIRLSFSKNPLGVRS 487
>gi|170583984|ref|XP_001896809.1| RNA binding protein [Brugia malayi]
gi|158595852|gb|EDP34335.1| RNA binding protein, putative [Brugia malayi]
Length = 367
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D +RE+ +FR GY+ L +S+ GG + FV F S A A
Sbjct: 40 TLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKD-GGIASPVGFVTFSSAEDAEIA 98
Query: 194 MDALQGYRFDEHDRDSVKL 212
M ALQ FD ++L
Sbjct: 99 MKALQSALFDPITGHKIRL 117
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A STLFV L + E+ +F + G+ +RL H D + FV+F A
Sbjct: 279 ACSTLFVANLGDGVTEDELKAVFCAYPGFTRLRL------HTRNDTTV-AFVEFRDVRQA 331
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFAR 218
M+ALQG R R + R+++AR
Sbjct: 332 TLVMNALQGCRISSSHRGGI--RIEYAR 357
>gi|449525690|ref|XP_004169849.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Cucumis sativus]
Length = 306
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 10/95 (10%)
Query: 125 VPLPPDASS-----TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
+PL P +S TLF+ GLP D RE+ ++FR F GY+ L R P
Sbjct: 55 LPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL-----RTPTQTTQPF 109
Query: 180 CFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
F F A AM A+ G FD + + + L
Sbjct: 110 AFAVFSDQQSAVGAMHAVNGMVFDLEKQSVLYVDL 144
>gi|443720886|gb|ELU10438.1| hypothetical protein CAPTEDRAFT_179768 [Capitella teleta]
Length = 218
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
LF+ LP + + ++ +F F G++EVRLV RH + FV+F + A A
Sbjct: 145 ILFLTNLPEETTEMMLSMLFNQFPGFREVRLVP--GRHD------IAFVEFENEVQAGAA 196
Query: 194 MDALQGYR 201
DALQG++
Sbjct: 197 KDALQGFK 204
>gi|346473641|gb|AEO36665.1| hypothetical protein [Amblyomma maculatum]
Length = 183
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 106 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 155
Query: 188 AHAATAMDALQGYR 201
++ A +ALQG++
Sbjct: 156 IQSSAAKEALQGFK 169
>gi|225683351|gb|EEH21635.1| RNA-binding protein Scw1 [Paracoccidioides brasiliensis Pb03]
Length = 594
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 392 NTLYVGNLPHDTSEDELKSLFTKQRGYKRLCFRNKQNGP-------MCFVEFEDISFATK 444
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A+ L GY+ +SVK +RL F++ P G R G
Sbjct: 445 ALHELYGYQLS----NSVKGGIRLSFSKNPLGVRPG 476
>gi|405974726|gb|EKC39350.1| U1 small nuclear ribonucleoprotein A [Crassostrea gigas]
Length = 541
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 464 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 513
Query: 188 AHAATAMDALQGYR 201
+ A DALQG++
Sbjct: 514 VQSGAAKDALQGFK 527
>gi|295657738|ref|XP_002789435.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283857|gb|EEH39423.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 583
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 381 NTLYVGNLPHDTSEDELKSLFTKQRGYKRLCFRNKQNGP-------MCFVEFEDISFATK 433
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A+ L GY+ +SVK +RL F++ P G R G
Sbjct: 434 ALHELYGYQLS----NSVKGGIRLSFSKNPLGVRPG 465
>gi|261201640|ref|XP_002628034.1| RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239590131|gb|EEQ72712.1| RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|327352905|gb|EGE81762.1| RNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 591
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 393 NTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGP-------MCFVEFEDISFATK 445
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A+ L GY+ +SVK +RL F++ P G R G
Sbjct: 446 ALHELYGYQLS----NSVKGGIRLSFSKNPLGVRPG 477
>gi|225719682|gb|ACO15687.1| U1 small nuclear ribonucleoprotein A [Caligus clemensi]
Length = 217
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 140 PPN--QILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 189
Query: 188 AHAATAMDALQGYR 201
+A A ++LQG++
Sbjct: 190 VQSAAARESLQGFK 203
>gi|154285786|ref|XP_001543688.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407329|gb|EDN02870.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 408
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 210 NTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGP-------MCFVEFEDISFATK 262
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A+ L GY+ +SVK +RL F++ P G R G
Sbjct: 263 ALHELYGYQLS----NSVKGGIRLSFSKNPLGVRPG 294
>gi|115466456|ref|NP_001056827.1| Os06g0151200 [Oryza sativa Japonica Group]
gi|55296621|dbj|BAD69323.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|55297274|dbj|BAD69059.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113594867|dbj|BAF18741.1| Os06g0151200 [Oryza sativa Japonica Group]
gi|215697009|dbj|BAG91003.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ ++F G+ L + G ++ FV FV+ A +A
Sbjct: 33 TLFVAGLPDDVKPREIHNLFSSRPGFDHCLL-----EYTGRGNQVVAFVSFVNHQAALSA 87
Query: 194 MDALQGYRFDEHDRDSVKLRL 214
M AL G FD D + + L
Sbjct: 88 MSALNGTVFDPDTGDRLHIEL 108
Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP STLFV L C+ E+ + G+ +++ R GG P+ F DF
Sbjct: 214 IPP--CSTLFVANLGHSCTEEELKEVLSKQPGFHLLKM-----RRRGGMPV--AFADFTD 264
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ AMDALQG D D L++++AR
Sbjct: 265 IESSTAAMDALQGTVLASSDADG--LQIEYAR 294
>gi|353234729|emb|CCA66751.1| related to small nuclear ribonucleoprotein snRNP U1A
[Piriformospora indica DSM 11827]
Length = 274
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 18/112 (16%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
P P+AK R + L LPP+ LFV+ LP D ++ + +F F + EVR++
Sbjct: 180 PAPTAK-RPVVLMPDEY---LPPN--QILFVQNLPPDITKDALVAMFSRFENFYEVRMIP 233
Query: 167 KESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ + FV++ A A A DAL ++ D K+++ +AR
Sbjct: 234 TKKD--------IAFVEYADEASATVAKDALHNFKLD----GEAKIKVTYAR 273
>gi|345485970|ref|XP_001605039.2| PREDICTED: protein couch potato-like [Nasonia vitripennis]
Length = 327
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S E+ IF F G+ +R+ +K GG P+ FV++ +AA
Sbjct: 227 STLFVANLGQFVSEHELKEIFNSFPGFCRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 279
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYPGARSG 225
AM LQG DR ++ R+++A+ A G
Sbjct: 280 AMATLQGSLLVSSDRGAI--RIEYAKSKMAEVG 310
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ +FR + GY+ L K + G + FV F + +
Sbjct: 20 DEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLL--KVTNKNGKTASPVGFVTFHTRSE 77
Query: 190 AATAM-DALQGYRFDEHDRDSVKLRLQFAR 218
A A D QG RFD ++ RL+FA+
Sbjct: 78 AEAAKHDLQQGVRFDPDMPQTI--RLEFAK 105
>gi|313225840|emb|CBY07314.1| unnamed protein product [Oikopleura dioica]
Length = 335
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIF---------RPFVGYKEVRLVSKESRHPGGDPL 177
+P D S +FV GLP+ + ++ F + + ++KE++ P GD
Sbjct: 153 MPTDCSDCVFVSGLPNTVRKENISMFFSTAGQIMIDKKTQNERIFLFLNKETKQPVGD-- 210
Query: 178 ILCFVDFVSPAHAATAMDALQGYRFD 203
C V + P+HAA A++ L G F+
Sbjct: 211 --CTVTYQDPSHAAAAIEMLNGTDFN 234
>gi|313221201|emb|CBY32024.1| unnamed protein product [Oikopleura dioica]
Length = 335
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIF---------RPFVGYKEVRLVSKESRHPGGDPL 177
+P D S +FV GLP+ + ++ F + + ++KE++ P GD
Sbjct: 153 MPTDCSDCVFVSGLPNTVRKENISMFFSTAGQIMIDKKTQNERIFLFLNKETKQPVGD-- 210
Query: 178 ILCFVDFVSPAHAATAMDALQGYRFD 203
C V + P+HAA A++ L G F+
Sbjct: 211 --CTVTYQDPSHAAAAIEMLNGTDFN 234
>gi|255637677|gb|ACU19162.1| unknown [Glycine max]
Length = 189
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLFV GLP D RE+ ++FR G+ +L ++ G ++ F F + A
Sbjct: 21 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQSAMA 75
Query: 193 AMDALQGYRFD 203
A+ AL G +FD
Sbjct: 76 ALHALNGVKFD 86
>gi|449679798|ref|XP_002163097.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Hydra
magnipapillata]
Length = 219
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
G ++ +P + LF+ LP + + +A +F+ F GYKEVRLV RH +
Sbjct: 133 GHMQMQMPEIPNQILFLSELPDETTEIMLAMLFQQFDGYKEVRLVP--GRHD------IA 184
Query: 181 FVDFVSPAHAATAMDALQGYRF 202
FV+F A A D L G++
Sbjct: 185 FVEFEEAEKARIAKDTLNGFKI 206
>gi|363814370|ref|NP_001242824.1| uncharacterized protein LOC100810989 [Glycine max]
gi|255636681|gb|ACU18677.1| unknown [Glycine max]
Length = 265
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLFV GLP D RE+ ++FR G+ +L ++ G ++ F F + A
Sbjct: 22 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQSAMA 76
Query: 193 AMDALQGYRFD 203
A+ AL G +FD
Sbjct: 77 ALHALNGVKFD 87
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLF+ L +C+ E+ F + G+ V++ S+ GG P + FVDF AA
Sbjct: 183 STLFIANLGPNCTEDELKQAFSVYTGFNMVKMRSR-----GGMP--VAFVDFEETDQAAK 235
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
++ LQG DR + +++AR
Sbjct: 236 VVEELQGSLLPSSDRGG--MHIEYAR 259
>gi|225558198|gb|EEH06482.1| RNA binding protein [Ajellomyces capsulatus G186AR]
Length = 591
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 393 NTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGP-------MCFVEFEDISFATK 445
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A+ L GY+ +SVK +RL F++ P G R G
Sbjct: 446 ALHELYGYQLS----NSVKGGIRLSFSKNPLGVRPG 477
>gi|309266585|ref|XP_003086803.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 282
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFTQFPGFKEVRLVP--GRHD------IDFVEFDNE 254
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A D LQG++ +++ +++ FA+
Sbjct: 255 VQAGAARDVLQGFKITQNN----AMKISFAK 281
>gi|225680707|gb|EEH18991.1| multiple RNA-binding domain-containing protein [Paracoccidioides
brasiliensis Pb03]
Length = 805
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL--CFVDFVS 186
P +STLFV L + +A +F+P G+ R+ +K + G+ L + FV+F +
Sbjct: 573 PLETSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKTKPNPKRPGETLSMGFGFVEFRT 632
Query: 187 PAHAATAMDALQGYRFDEHD 206
A A A+ + GY+ D+H+
Sbjct: 633 SAQARAALATMNGYKLDQHE 652
>gi|226286959|gb|EEH42472.1| RNA binding protein [Paracoccidioides brasiliensis Pb18]
Length = 582
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 380 NTLYVGNLPHDTSEDELKSLFTKQRGYKRLCFRNKQNGP-------MCFVEFEDISFATK 432
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A+ L GY+ +SVK +RL F++ P G R G
Sbjct: 433 ALHELYGYQLS----NSVKGGIRLSFSKNPLGVRPG 464
>gi|195570023|ref|XP_002103008.1| GD19192 [Drosophila simulans]
gi|194198935|gb|EDX12511.1| GD19192 [Drosophila simulans]
Length = 221
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 58 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFHTRAGAEAA 115
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
LQG RFD ++ RL+FA+
Sbjct: 116 KQDLQGVRFDPDMPQTI--RLEFAK 138
>gi|361127106|gb|EHK99086.1| putative Cell wall integrity protein scw1 [Glarea lozoyensis 74030]
Length = 446
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 251 NTLYVGNLPIDTSEDELKAMFSKQRGYKRLCFRTKQNGP-------MCFVEFEDVSFATK 303
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSGGG 227
A+ L G+ H+ +RL F++ P G RSG G
Sbjct: 304 ALHELYGHPL--HNSIKGGIRLSFSKNPLGVRSGQG 337
>gi|240277155|gb|EER40664.1| RNA binding protein [Ajellomyces capsulatus H143]
gi|325093977|gb|EGC47287.1| RNA binding protein [Ajellomyces capsulatus H88]
Length = 509
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 311 NTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGP-------MCFVEFEDISFATK 363
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A+ L GY+ +SVK +RL F++ P G R G
Sbjct: 364 ALHELYGYQLS----NSVKGGIRLSFSKNPLGVRPG 395
>gi|226506868|ref|NP_001142658.1| uncharacterized protein LOC100274945 [Zea mays]
gi|195607956|gb|ACG25808.1| hypothetical protein [Zea mays]
Length = 97
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 197 LQGYRFDEHDRDSVKLRLQFARY--PGARSGGGHRGKR 232
GY+FDEHDR+S LRLQFAR+ P SG G RG+R
Sbjct: 60 FSGYKFDEHDRNSPNLRLQFARFAGPKGNSGPGGRGRR 97
>gi|167537765|ref|XP_001750550.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770971|gb|EDQ84646.1| predicted protein [Monosiga brevicollis MX1]
Length = 345
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 16/91 (17%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI--LCFVDFVSP 187
D S LF+E LPSD ++ + +F+ F G+KEVRLV P+ + FV++ +
Sbjct: 267 DPSPILFLENLPSDRTQEMLTALFKEFPGFKEVRLV----------PIRPDIGFVEYENE 316
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A+ A+ AL G + K+R+ F++
Sbjct: 317 VQASAALPALNGKEVTPGN----KMRVSFSK 343
>gi|320591314|gb|EFX03753.1| U1 small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 236
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ TLFV+ LP DC + IF + G++EVRLV PG L FV++ +
Sbjct: 157 LPPN--KTLFVQNLPEDCDADVLTGIFGRYEGFREVRLV------PGRR---LAFVEYDA 205
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQ 215
A TA + G E D+ +K+ Q
Sbjct: 206 EPGAITAKENTAGMLVGEADKRPIKVTYQ 234
>gi|302420163|ref|XP_003007912.1| RNA binding protein [Verticillium albo-atrum VaMs.102]
gi|261353563|gb|EEY15991.1| RNA binding protein [Verticillium albo-atrum VaMs.102]
Length = 450
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A
Sbjct: 266 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDVTFATK 318
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L G H+ +RL F++ P G RSG
Sbjct: 319 ALNELYGQPL--HNSVKGGIRLSFSKNPLGVRSG 350
>gi|226292390|gb|EEH47810.1| multiple RNA-binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 820
Score = 45.4 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL--CFVDFVS 186
P +STLFV L + +A +F+P G+ R+ +K + G+ L + FV+F +
Sbjct: 588 PLETSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKTKPNPKRPGETLSMGFGFVEFRT 647
Query: 187 PAHAATAMDALQGYRFDEHD 206
A A A+ + GY+ D+H+
Sbjct: 648 SAQARAALATMNGYKLDQHE 667
>gi|63592914|ref|XP_356179.3| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 1 [Mus
musculus]
Length = 281
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + A
Sbjct: 206 NHILFLTNLPEETNELMLSMLFTQFPGFKEVRLVP--GRH------DIDFVEFDNEVQAG 257
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFAR 218
A D LQG++ +++ +++ FA+
Sbjct: 258 AARDVLQGFKITQNN----AMKISFAK 280
>gi|15231331|ref|NP_187983.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641879|gb|AEE75400.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 296
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL--------VSKESRH-----PGGD 175
P A +TLFV GLP+D RE+ ++FR G++ +L V K + P
Sbjct: 33 PGAINTLFVSGLPNDVKAREIHNLFRRRHGFESCQLKYTGRGDQVCKNLQFLFFFIPIFR 92
Query: 176 PLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
++ F F S A AM+ L G +FD ++ + L
Sbjct: 93 KAVVAFATFTSHRFALAAMNELNGVKFDPQTGSNLHIEL 131
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A STLF+ L +C+ E+ + + G+ +++ ++ GG P + F DF A
Sbjct: 221 ACSTLFIANLGPNCTEDELKQLLSRYPGFHILKIRAR-----GGMP--VAFADFEEIEQA 273
Query: 191 ATAMDALQGYRFDEHDR 207
AM+ LQG DR
Sbjct: 274 TDAMNHLQGNLLSSSDR 290
>gi|239611843|gb|EEQ88830.1| RNA binding protein [Ajellomyces dermatitidis ER-3]
Length = 531
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 382 NTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGP-------MCFVEFEDISFATK 434
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A+ L GY+ +SVK +RL F++ P G R G
Sbjct: 435 ALHELYGYQLS----NSVKGGIRLSFSKNPLGVRPG 466
>gi|50311967|ref|XP_456015.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645151|emb|CAG98723.1| KLLA0F20834p [Kluyveromyces lactis]
Length = 616
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + +E+ +F G+K + +K + + G P +CFV+F AHA
Sbjct: 449 NTLYVGNLPPDATEQELRQLFGGQKGFKRLSFRNKNNNNSGHGP--MCFVEFEDVAHATR 506
Query: 193 AMDALQGYRFD----EHDRDSVKLRLQFARYP 220
A+ L G + H+ +RL F++ P
Sbjct: 507 ALAELYGSQLPRPVGAHNTKG-GIRLSFSKNP 537
>gi|121702823|ref|XP_001269676.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
gi|119397819|gb|EAW08250.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
Length = 822
Score = 45.4 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Query: 88 GMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRR 147
G+P +PV + + V G A + A G P +STLFV+ L +
Sbjct: 560 GVPQKPVLETKAVSQGFSTADTFAAEEADG-----------PVVASTLFVKNLNFSTTND 608
Query: 148 EVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVSPAHAATAMDALQGYRFDEH 205
+ +FRP G+ R+ +K + + PG + FVDF S A A A+ A+ GYR D+H
Sbjct: 609 KFVDLFRPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFKSKAQAQAALAAMDGYRLDQH 668
Query: 206 D 206
+
Sbjct: 669 E 669
>gi|426200920|gb|EKV50843.1| hypothetical protein AGABI2DRAFT_189187 [Agaricus bisporus var.
bisporus H97]
Length = 292
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP ++ ++ +F + EVR++ + + FV++V
Sbjct: 214 LPPN--KILFLQNLPESVTKDQLMSLFSQYPNLYEVRMIPTKKD--------IAFVEYVD 263
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DAL Y+ D + K+++ FAR
Sbjct: 264 EGSAGVAKDALHNYKLDGEN----KIKITFAR 291
>gi|405952772|gb|EKC20544.1| Protein couch potato [Crassostrea gigas]
Length = 318
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S +E+ +F F G+ +R+ +K GG P+ FV+F AA
Sbjct: 217 STLFVANLGQFSSEQELKDLFNSFQGFSRLRMHNK-----GGSPV--AFVEFQDVRQAAE 269
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
AM LQG+ DR + R+++A+
Sbjct: 270 AMGRLQGFVLLSSDRGGI--RIEYAK 293
>gi|148689095|gb|EDL21042.1| mCG15722 [Mus musculus]
Length = 281
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFTQFPGFKEVRLVP--GRH------DIDFVEFDNE 253
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A D LQG++ +++ +++ FA+
Sbjct: 254 VQAGAARDVLQGFKITQNN----AMKISFAK 280
>gi|356495478|ref|XP_003516604.1| PREDICTED: uncharacterized protein LOC100799471 [Glycine max]
Length = 332
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ ++FR F Y+ L R P F F S A A
Sbjct: 74 TLFVAGLPEDVKPREIYNLFREFPDYESSHL-----RSPSNSSQPFAFAVFASQQSAIMA 128
Query: 194 MDALQGYRFD 203
AL G FD
Sbjct: 129 KHALNGLVFD 138
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 122 RSEVPLPPDASS---TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
+S P P S+ TLFV L S C+ +E+ +F + G+ ++++ S G P
Sbjct: 230 KSSTPYVPQNSTPCATLFVANLGSSCNEQELIQVFSRYPGFLKLKMQSTY-----GAP-- 282
Query: 179 LCFVDFVSPAHAATAMDALQG 199
+ FVDF + A+++LQG
Sbjct: 283 VAFVDFQDVGSSTDALNSLQG 303
>gi|156088599|ref|XP_001611706.1| U2 small nuclear ribonucleoprotein B' [Babesia bovis T2Bo]
gi|154798960|gb|EDO08138.1| U2 small nuclear ribonucleoprotein B', putative [Babesia bovis]
Length = 213
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 13/87 (14%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFVE L D ++ V +F+ + GYK+ R V + + FVDF + A
Sbjct: 138 TLFVENLHPDMNKMSVELLFQQYPGYKDTRFVEGKC---------VAFVDFATAYQGEVA 188
Query: 194 MDALQGYRFDEHDRDSVKLRLQFARYP 220
+ LQG+ S LR+ FA+ P
Sbjct: 189 LQGLQGFSVSH----SHALRISFAKSP 211
>gi|169589|gb|AAA33847.1| spliceosomal protein [Solanum tuberosum]
Length = 231
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+ ++ LF++ LP + + + +F+ + G++EVR++ + PG + FV+F
Sbjct: 154 EPNNILFIQNLPHETTSMMLEVLFKQYPGFREVRMIEAK---PG-----IAFVEFDDDVQ 205
Query: 190 AATAMDALQGYRFDEHD 206
++ AM ALQG++ +
Sbjct: 206 SSVAMQALQGFKITPQN 222
>gi|297843490|ref|XP_002889626.1| hypothetical protein ARALYDRAFT_887900 [Arabidopsis lyrata subsp.
lyrata]
gi|297335468|gb|EFH65885.1| hypothetical protein ARALYDRAFT_887900 [Arabidopsis lyrata subsp.
lyrata]
Length = 243
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 12/83 (14%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF+ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 156 MPPN--NILFIHNLPIEMTSMMLQLLFEQYTGFKEIRMIEAK---PG-----IAFVEYED 205
Query: 187 PAHAATAMDALQGYRFDEHDRDS 209
++ AM ALQG F +H +S
Sbjct: 206 DVQSSMAMQALQG--FQDHSTES 226
>gi|409084026|gb|EKM84383.1| hypothetical protein AGABI1DRAFT_110905 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 292
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP ++ ++ +F + EVR++ + + FV++V
Sbjct: 214 LPPN--KILFLQNLPESVTKDQLMSLFSQYPNLYEVRMIPTKKD--------IAFVEYVD 263
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DAL Y+ D + K+++ FAR
Sbjct: 264 EGSAGVAKDALHNYKLDGEN----KIKITFAR 291
>gi|224034387|gb|ACN36269.1| unknown [Zea mays]
gi|413944623|gb|AFW77272.1| hypothetical protein ZEAMMB73_456532 [Zea mays]
Length = 254
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
GG R +P ++ LFV+ LP + + + +F + G+KEVR++ + PG
Sbjct: 166 GGQRVMMPEIIVPNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMIEAK---PG----- 217
Query: 179 LCFVDFVSPAHAATAMDALQGYRFDEHDRDSV 210
+ FV++ A AM+ LQ ++ + ++ +
Sbjct: 218 IAFVEYGDETQATAAMNNLQSFKITKENQMVI 249
>gi|426246411|ref|XP_004016988.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Ovis aries]
Length = 225
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQGYR 201
+F + A DALQG++
Sbjct: 193 EFENDGQAGAGRDALQGFK 211
>gi|307202215|gb|EFN81702.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Harpegnathos saltator]
Length = 907
Score = 45.1 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP ++ E+ IF+ + KEVRLV+ + H G L +V++ A AA A+
Sbjct: 752 LFVKGLPITTTKEELEEIFKIYGALKEVRLVTYRNGHSKG----LAYVEYCDEATAAKAL 807
Query: 195 DALQGYR 201
+ G +
Sbjct: 808 LGIDGMK 814
>gi|190344482|gb|EDK36163.2| hypothetical protein PGUG_00261 [Meyerozyma guilliermondii ATCC
6260]
Length = 589
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 24/133 (18%)
Query: 121 GRSEVP-------LPPDAS--------STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
GR +VP +PP A+ +TL+V LP D + E+ +F P G++ +
Sbjct: 429 GRKDVPDLSLLARVPPPANPADQNPPCNTLYVGNLPPDATEAELRALFSPQKGFRRLSFR 488
Query: 166 SKESRHPGGDPLI------LCFVDFVSPAHAATAMDALQGYRFDEHDRDSVK--LRLQFA 217
+K G +CFV+F AHA A+ L G + + K +RL F+
Sbjct: 489 TKNQSSAGPSSATSHNHGPMCFVEFEDVAHATRALAELYGRALPRPNGSNGKGGIRLSFS 548
Query: 218 RYP-GARSGGGHR 229
+ P G R G R
Sbjct: 549 KNPLGVRGPGNPR 561
>gi|453085210|gb|EMF13253.1| hypothetical protein SEPMUDRAFT_148613 [Mycosphaerella populorum
SO2202]
Length = 568
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K H G +CFV+F + A
Sbjct: 375 NTLYVGNLPVDTSEDELKALFSKVRGYKRLCFRTK---HQGS----MCFVEFEDVSFATK 427
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARS 224
A++ L G H+ +RL F++ P G RS
Sbjct: 428 ALNELYGIPL--HNSTKGGIRLSFSKNPLGVRS 458
>gi|401887165|gb|EJT51169.1| RNA binding protein [Trichosporon asahii var. asahii CBS 2479]
Length = 269
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ + LFV+ LP ++ ++ +F + G E+R ++ + + FV++
Sbjct: 191 LPPN--NVLFVQNLPEGTTQDDLREVFEQYPGLVEIRTIAAKKD--------IAFVEYAD 240
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+A A DAL ++ D K+++ FAR
Sbjct: 241 ETASAVAKDALHNFKID----GETKMKVTFAR 268
>gi|378730449|gb|EHY56908.1| hypothetical protein HMPREF1120_04972 [Exophiala dermatitidis
NIH/UT8656]
Length = 501
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ IF GYK + ++H G +CFV+F + A
Sbjct: 312 NTLYVGNLPMDTSEDELKAIFSKQRGYKRLCF---RTKHNG----PMCFVEFEDISFATK 364
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L G + H+ +RL F++ P G R+G
Sbjct: 365 ALNELYGAQL--HNSVKGGIRLSFSKNPLGVRAG 396
>gi|325182719|emb|CCA17174.1| U1 small nuclear ribonucleoprotein A putative [Albugo laibachii
Nc14]
Length = 234
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
LF++ LP C++ + +F + GYKEVR+V PG L FV+F + A+ A
Sbjct: 162 ILFLQDLPPSCNQDMLRVLFEQYHGYKEVRMV------PGKS---LAFVEFGDESQASVA 212
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+ L G++ D L++ FA+
Sbjct: 213 LQGLYGFKLTSTD----VLKISFAK 233
>gi|225434417|ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Vitis vinifera]
gi|297745807|emb|CBI15863.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LF++ LP + + +F+ + G++EVR++ + PG + FV+F ++
Sbjct: 159 NNILFIQNLPHQTTSMMLQVLFQQYPGFREVRMIEAK---PG-----IAFVEFEDDVQSS 210
Query: 192 TAMDALQGYRFDEHD 206
AM+ALQG++ +
Sbjct: 211 MAMEALQGFKITPQN 225
>gi|380482693|emb|CCF41081.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 519
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 338 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGP-------MCFVEFEDVSFATK 390
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A+ L G+ H+ +RL F++ P G RSG
Sbjct: 391 ALHELYGHPL--HNSVKGGIRLSFSKNPLGVRSG 422
>gi|310791144|gb|EFQ26673.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 539
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 357 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGP-------MCFVEFEDVSFATK 409
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A+ L G+ H+ +RL F++ P G RSG
Sbjct: 410 ALHELYGHPL--HNSVKGGIRLSFSKNPLGVRSG 441
>gi|346977589|gb|EGY21041.1| RNA binding protein [Verticillium dahliae VdLs.17]
Length = 508
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A
Sbjct: 324 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDVTFATK 376
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L G H+ +RL F++ P G RSG
Sbjct: 377 ALNELYGQPL--HNSVKGGIRLSFSKNPLGVRSG 408
>gi|237840841|ref|XP_002369718.1| U2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|95007435|emb|CAJ20656.1| Rnp (Rrm rna binding domain) containing protein, putative
[Toxoplasma gondii RH]
gi|211967382|gb|EEB02578.1| U2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482936|gb|EEE21267.1| u2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
GT1]
gi|221503274|gb|EEE28972.1| u2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
VEG]
Length = 233
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
+LF+E LP ++ + +F + G+ E RL+ E R + FVDF + A AA A
Sbjct: 161 SLFIENLPPKATKTSLDILFGQYRGHTESRLI--EGRG-------VAFVDFSTQAQAAVA 211
Query: 194 MDALQGYRFD 203
M +QG++ D
Sbjct: 212 MQGMQGFKVD 221
>gi|326474597|gb|EGD98606.1| pre-rRNA processing protein Mrd1 [Trichophyton tonsurans CBS
112818]
Length = 798
Score = 45.1 bits (105), Expect = 0.023, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
+++ P P S+TLFV L + ++ +FRP G+ ++ ++ G+ L + F
Sbjct: 561 KADEPEAPMESATLFVRNLNFTTTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGF 620
Query: 182 --VDFVSPAHAATAMDALQGYRFDEHD 206
V+F A A A+ AL GY+ D+H+
Sbjct: 621 GFVEFKGRAQAEAALKALNGYKLDQHE 647
>gi|383858263|ref|XP_003704621.1| PREDICTED: protein couch potato-like [Megachile rotundata]
Length = 334
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S E+ IF F G+ +R+ +K GG P+ FV++ +AA
Sbjct: 219 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 271
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYPGARSG 225
AM LQG DR ++ R+++A+ A G
Sbjct: 272 AMATLQGSFLLSSDRGAI--RIEYAKSKMAEVG 302
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA-AT 192
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 17 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFHTRAGAEAA 74
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
D QG RFD ++ RL+FA+
Sbjct: 75 KQDLQQGVRFDPDMPQTI--RLEFAK 98
>gi|377835922|ref|XP_003688944.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 309
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KE LV PG L + FV+F +
Sbjct: 207 PPN--HILFLTNLPEETNELMLSMLFTQFRGFKEAGLV------PGR--LDIAFVEFDNE 256
Query: 188 AHAATAMDALQGYRFDEHD 206
A A+DALQG++ +++
Sbjct: 257 VQAGAALDALQGFKITQNN 275
>gi|326507414|dbj|BAK03100.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528465|dbj|BAJ93414.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 249
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 16/95 (16%)
Query: 124 EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVD 183
E+ +P ++ LFV+ LP D + + F + G+KEVR++ + PG + FV+
Sbjct: 170 EIIVP---NNILFVQELPHDATALMLQMFFCQYPGFKEVRMIEAK---PG-----IAFVE 218
Query: 184 FVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ A AM+ LQG++ E+ +R+ +A+
Sbjct: 219 YGDEGQATAAMNLLQGFKIKENP-----MRITYAK 248
>gi|213403304|ref|XP_002172424.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212000471|gb|EEB06131.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 804
Score = 45.1 bits (105), Expect = 0.025, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 128 PPDA-SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGG-DPLILCFVDFV 185
P D +STLFV+ + S+ + IF G+ + +K S+ PG + FV+F
Sbjct: 580 PADGETSTLFVKNISFSTSQTDFQRIFASLNGFLSAVIRAKPSKRPGQLMSMGFGFVEFR 639
Query: 186 SPAHAATAMDALQGYRFDEH 205
S A TAM+A+QG+ D H
Sbjct: 640 SKEDAVTAMNAMQGFLLDGH 659
>gi|384493858|gb|EIE84349.1| hypothetical protein RO3G_09059 [Rhizopus delemar RA 99-880]
Length = 387
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPS ++ E+ +F GYK + S + P P+ CFV+F +A
Sbjct: 282 NTLYVGNLPSSTNQEELRSLFSKCEGYKRM---SFRIKSPQQGPM--CFVEFEDVLYATQ 336
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP 220
AM LQG+ +SVK +RL F++ P
Sbjct: 337 AMTQLQGHALS----NSVKGGIRLSFSKNP 362
>gi|328789046|ref|XP_392443.4| PREDICTED: protein couch potato-like [Apis mellifera]
gi|350408751|ref|XP_003488500.1| PREDICTED: protein couch potato-like [Bombus impatiens]
Length = 326
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S E+ IF F G+ +R+ +K GG P+ FV++ +AA
Sbjct: 226 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 278
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYPGARSG 225
AM LQG DR ++ R+++A+ A G
Sbjct: 279 AMATLQGSFLLSSDRGAI--RIEYAKSKMAEVG 309
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A
Sbjct: 20 DEVRTLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFHTRAG 77
Query: 190 A-ATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A D QG RFD ++ RL+FA+
Sbjct: 78 AEAAKQDLQQGVRFDPDMPQTI--RLEFAK 105
>gi|302660324|ref|XP_003021842.1| RNA binding protein [Trichophyton verrucosum HKI 0517]
gi|291185760|gb|EFE41224.1| RNA binding protein [Trichophyton verrucosum HKI 0517]
Length = 654
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK R++ ++ P G +CFV+F + A
Sbjct: 427 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ--KPNGP---ICFVEFEDVSFATK 479
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
+ L GY +SVK +RL F++ P G R+G
Sbjct: 480 CLTELYGYELS----NSVKGGIRLSFSKNPLGVRNG 511
>gi|327293680|ref|XP_003231536.1| RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326466164|gb|EGD91617.1| RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 556
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK R++ ++ P G +CFV+F + A
Sbjct: 329 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ--KPNGP---ICFVEFEDVSFATK 381
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
+ L GY +SVK +RL F++ P G R+G
Sbjct: 382 CLTELYGYELS----NSVKGGIRLSFSKNPLGVRNG 413
>gi|302505920|ref|XP_003014917.1| RNA binding protein [Arthroderma benhamiae CBS 112371]
gi|291178488|gb|EFE34277.1| RNA binding protein [Arthroderma benhamiae CBS 112371]
Length = 655
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK R++ ++ P G +CFV+F + A
Sbjct: 428 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ--KPNGP---ICFVEFEDVSFATK 480
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
+ L GY +SVK +RL F++ P G R+G
Sbjct: 481 CLTELYGYELS----NSVKGGIRLSFSKNPLGVRNG 512
>gi|388496982|gb|AFK36557.1| unknown [Medicago truncatula]
Length = 268
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLFV GLP D RE+ ++FR G+ +L ++ G ++ F F + A
Sbjct: 21 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQAAMQ 75
Query: 193 AMDALQGYRFD 203
A+ +L G +FD
Sbjct: 76 ALHSLNGVKFD 86
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLF+ L +C+ E+ + G+ V++ S+ GG P + F DF A
Sbjct: 185 STLFIANLGPNCTEDELKQALSVYAGFNLVKMRSR-----GGMP--VAFADFEEIDQAVK 237
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
M+ LQG DR + +++AR
Sbjct: 238 VMEELQGSSLPSSDRGG--MHIEYAR 261
>gi|255711664|ref|XP_002552115.1| KLTH0B07546p [Lachancea thermotolerans]
gi|238933493|emb|CAR21677.1| KLTH0B07546p [Lachancea thermotolerans CBS 6340]
Length = 639
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + E+ +F G++ + +K + G P +CFV+F AHA
Sbjct: 521 NTLYVGNLPPDATEHELRQLFSTQKGFRRLSFRNKNTNGNGHGP--MCFVEFEDVAHATR 578
Query: 193 AMDALQGYRF----DEHDRDSVKLRLQFARYP 220
A+ L G + H+ +RL F++ P
Sbjct: 579 ALAELYGRQLPRSGTSHNNKG-GIRLSFSKNP 609
>gi|380018457|ref|XP_003693144.1| PREDICTED: protein couch potato-like [Apis florea]
Length = 331
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S E+ IF F G+ +R+ +K GG P+ FV++ +AA
Sbjct: 226 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 278
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYPGARSG 225
AM LQG DR ++ R+++A+ A G
Sbjct: 279 AMATLQGSFLLSSDRGAI--RIEYAKSKMAEVG 309
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A
Sbjct: 20 DEVRTLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFHTRAG 77
Query: 190 A-ATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A D QG RFD ++ RL+FA+
Sbjct: 78 AEAAKQDLQQGVRFDPDMPQTI--RLEFAK 105
>gi|323450983|gb|EGB06862.1| hypothetical protein AURANDRAFT_28680 [Aureococcus anophagefferens]
Length = 214
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S+ LF + LP DC+ ++ +F+ + G+KEVR+V PG + FV+F A+
Sbjct: 139 SNVLFAQDLPDDCNDMMLSILFQQYGGFKEVRMV------PGKKG--IAFVEFADETQAS 190
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFAR 218
A+ L ++ D L L FA+
Sbjct: 191 LALQGLDNFKLTPTD----TLALSFAK 213
>gi|242093984|ref|XP_002437482.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
gi|241915705|gb|EER88849.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
Length = 310
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 122 RSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
R+E LP D TLF+ GLP+D REV ++FR F GY L + +S
Sbjct: 50 RAEQALPARDELRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTGKSSQ------AYA 103
Query: 181 FVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
F F A TA+ G FD S+ + L
Sbjct: 104 FAVFADQQSALTALSGTNGMVFDLEKNCSLHVDL 137
>gi|66806007|ref|XP_636725.1| U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
gi|74996697|sp|Q54J05.1|RU2B_DICDI RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|60465122|gb|EAL63221.1| U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
Length = 241
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ TLFVE LP C ++ +F F G+KEV +V ES+ + F++F
Sbjct: 164 PPN--KTLFVENLPDKCDSMMLSMLFSQFQGFKEVHMV--ESKKG------IAFIEFEDE 213
Query: 188 AHAATAMDALQGYR 201
+ AM LQ ++
Sbjct: 214 IKSGFAMTNLQHFK 227
>gi|149057907|gb|EDM09150.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057912|gb|EDM09155.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057917|gb|EDM09160.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 90
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 8 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 60
Query: 194 MDALQ 198
+AL
Sbjct: 61 KNALN 65
>gi|440472158|gb|ELQ41041.1| RNA binding protein [Magnaporthe oryzae Y34]
Length = 622
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ F GYK + +K++ +CFV+F + A
Sbjct: 418 NTLYVGNLPIDTSEEELKATFSKQRGYKRLCFRTKQNGP-------MCFVEFEDVSFATK 470
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A+ L G+ H+ +RL F++ P G RSG
Sbjct: 471 ALHELYGHML--HNSVKGGIRLSFSKNPLGVRSG 502
>gi|312086378|ref|XP_003145052.1| hypothetical protein LOAG_09478 [Loa loa]
Length = 396
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D +RE+ +FR GY+ L +S+ GG + FV F S A A
Sbjct: 40 TLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKD-GGIASPVGFVTFSSAEDADIA 98
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
M LQ FD K+RL+ A+
Sbjct: 99 MKTLQSVLFDPTTGH--KIRLEKAK 121
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A STLFV L + E+ +F + G+ +RL H D + FV+F A
Sbjct: 308 ACSTLFVANLGDGITEDELKAVFCAYPGFTRLRL------HTRNDTTV-AFVEFRDVRQA 360
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFAR 218
M+ALQG R R + R+++AR
Sbjct: 361 TLVMNALQGCRISSSHRGGI--RIEYAR 386
>gi|389645993|ref|XP_003720628.1| RNA binding protein [Magnaporthe oryzae 70-15]
gi|86196803|gb|EAQ71441.1| hypothetical protein MGCH7_ch7g848 [Magnaporthe oryzae 70-15]
gi|351638020|gb|EHA45885.1| RNA binding protein [Magnaporthe oryzae 70-15]
gi|440479486|gb|ELQ60251.1| RNA binding protein [Magnaporthe oryzae P131]
Length = 622
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ F GYK + +K++ +CFV+F + A
Sbjct: 418 NTLYVGNLPIDTSEEELKATFSKQRGYKRLCFRTKQNGP-------MCFVEFEDVSFATK 470
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A+ L G+ H+ +RL F++ P G RSG
Sbjct: 471 ALHELYGHML--HNSVKGGIRLSFSKNPLGVRSG 502
>gi|340716150|ref|XP_003396564.1| PREDICTED: protein couch potato-like [Bombus terrestris]
Length = 315
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S E+ IF F G+ +R+ +K GG P+ FV++ +AA
Sbjct: 215 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 267
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYPGARSG 225
AM LQG DR ++ R+++A+ A G
Sbjct: 268 AMATLQGSFLLSSDRGAI--RIEYAKSKMAEVG 298
>gi|393910177|gb|EFO19018.2| hypothetical protein LOAG_09478 [Loa loa]
Length = 395
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D +RE+ +FR GY+ L +S+ GG + FV F S A A
Sbjct: 40 TLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKD-GGIASPVGFVTFSSAEDADIA 98
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
M LQ FD K+RL+ A+
Sbjct: 99 MKTLQSVLFDPTTGH--KIRLEKAK 121
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A STLFV L + E+ +F + G+ +RL H D + FV+F A
Sbjct: 308 ACSTLFVANLGDGITEDELKAVFCAYPGFTRLRL------HTRNDTTV-AFVEFRDVRQA 360
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFAR 218
M+ALQG R R + R+++AR
Sbjct: 361 TLVMNALQGCRISSSHRGGI--RIEYAR 386
>gi|194697902|gb|ACF83035.1| unknown [Zea mays]
gi|413934630|gb|AFW69181.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 306
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 122 RSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
R+E LP D TLF+ GLP+D REV ++FR F GY L + +S
Sbjct: 46 RAEQALPARDEVRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTGKSSQ------AYA 99
Query: 181 FVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
F F A A+ A G FD S+ + L
Sbjct: 100 FAVFADQQSALAALSATNGMVFDLEKNCSLHVDL 133
>gi|290562822|gb|ADD38806.1| U1 small nuclear ribonucleoprotein A [Lepeophtheirus salmonis]
Length = 217
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 140 PPN--QILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 189
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+A A +LQG++ + +++ FA+
Sbjct: 190 VQSAAARGSLQGFKITPN----ASMKISFAK 216
>gi|326479306|gb|EGE03316.1| RNA binding protein [Trichophyton equinum CBS 127.97]
Length = 543
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK R++ ++ P G +CFV+F + A
Sbjct: 340 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ--KPNGP---ICFVEFEDVSFATK 392
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
+ L GY +SVK +RL F++ P G R+G
Sbjct: 393 CLTELYGYELS----NSVKGGIRLSFSKNPLGVRNG 424
>gi|146421882|ref|XP_001486884.1| hypothetical protein PGUG_00261 [Meyerozyma guilliermondii ATCC
6260]
Length = 589
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 24/133 (18%)
Query: 121 GRSEVP-------LPPDAS--------STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
GR +VP +PP A+ +TL+V LP D + E+ +F P G++ +
Sbjct: 429 GRKDVPDLSLLARVPPPANPADQNPPCNTLYVGNLPPDATEAELRALFLPQKGFRRLSFR 488
Query: 166 SKESRHPGGDPLI------LCFVDFVSPAHAATAMDALQGYRFDEHDRDSVK--LRLQFA 217
+K G +CFV+F AHA A+ L G + + K +RL F+
Sbjct: 489 TKNQSSAGPSSATSHNHGPMCFVEFEDVAHATRALAELYGRALPRPNGSNGKGGIRLSFS 548
Query: 218 RYP-GARSGGGHR 229
+ P G R G R
Sbjct: 549 KNPLGVRGPGNPR 561
>gi|452825214|gb|EME32212.1| RNA-binding protein, putative [Galdieria sulphuraria]
Length = 333
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+A STLFV L ++ E+ ++F G++ VRL K+ R P + FV+F +
Sbjct: 194 NACSTLFVGNLSPSVTQAELENLFSRCTGFRRVRLNIKDERAP------VAFVEFTDSVY 247
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ AM Q ++ + R++FAR
Sbjct: 248 STQAMQQCQNVPLPSSEKGGI--RIEFAR 274
>gi|326929748|ref|XP_003211018.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Meleagris gallopavo]
Length = 899
Score = 44.7 bits (104), Expect = 0.033, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ GLP C++ E+ I + K++RLV+ + P G L +V+F + A A+ A+
Sbjct: 739 LFISGLPFSCTKEELEDICKAHGNVKDIRLVTNRAGKPKG----LAYVEFENEAQASQAV 794
Query: 195 DALQGYRFDEH 205
+ G EH
Sbjct: 795 LKMDGLTIKEH 805
>gi|307184926|gb|EFN71193.1| Protein couch potato [Camponotus floridanus]
Length = 358
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S E+ IF F G+ +R+ +K GG P+ FV++ +AA
Sbjct: 195 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 247
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYPGARSG 225
AM LQG DR ++ R+++A+ A G
Sbjct: 248 AMATLQGSFLLSSDRGAI--RIEYAKSKMAEVG 278
>gi|242086969|ref|XP_002439317.1| hypothetical protein SORBIDRAFT_09g004270 [Sorghum bicolor]
gi|241944602|gb|EES17747.1| hypothetical protein SORBIDRAFT_09g004270 [Sorghum bicolor]
Length = 259
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
GG R +P ++ LFV+ LP + + + +F + G+KEVR+V + PG
Sbjct: 171 GGQRVIMPEIIVPNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAK---PG----- 222
Query: 179 LCFVDFVSPAHAATAMDALQGYRFDEHDRDSV 210
+ FV++ A AM+ LQ ++ + ++ +
Sbjct: 223 IAFVEYGDEGQATAAMNNLQSFKITKENQMVI 254
>gi|840821|emb|CAA44751.1| U2-snRNP-specific b'' [Mus musculus]
Length = 97
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 117 GLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
G +VP PP+ LF+ LP + + ++ + F G+KEVRLV RH
Sbjct: 8 GTAAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLLNQFPGFKEVRLVP--GRHD--- 60
Query: 176 PLILCFVDFVSPAHAATAMDALQGYRF 202
+ FV+F + A A DALQG++
Sbjct: 61 ---IAFVEFENDGQAGAARDALQGFKI 84
>gi|401396957|ref|XP_003879947.1| hypothetical protein NCLIV_003960 [Neospora caninum Liverpool]
gi|325114355|emb|CBZ49912.1| hypothetical protein NCLIV_003960 [Neospora caninum Liverpool]
Length = 234
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
+LF+E LP ++ + +F + G+ E RL+ E R + FVDF + A AA A
Sbjct: 162 SLFIENLPPKATKTSLDILFGQYRGHTESRLI--EGRG-------VAFVDFSTQAQAAVA 212
Query: 194 MDALQGYRFD 203
M +QG++ D
Sbjct: 213 MQGMQGFKVD 222
>gi|449541608|gb|EMD32591.1| hypothetical protein CERSUDRAFT_118631 [Ceriporiopsis subvermispora
B]
Length = 272
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP S+ ++ +F + EVRL+ + + FV+++
Sbjct: 194 LPPN--KILFLQNLPESVSKDQLMALFSQYPNLHEVRLIPTKKD--------IAFVEYLD 243
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A +AL Y+ D + K+++ FAR
Sbjct: 244 EGSATVAKEALHNYKLDGEN----KIKITFAR 271
>gi|296816757|ref|XP_002848715.1| RNA binding protein [Arthroderma otae CBS 113480]
gi|238839168|gb|EEQ28830.1| RNA binding protein [Arthroderma otae CBS 113480]
Length = 621
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK R++ ++ P G +CFV+F + A
Sbjct: 399 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ--KPNGP---ICFVEFEDVSFATK 451
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
+ L GY +SVK +RL F++ P G R+G
Sbjct: 452 CLTELYGYELS----NSVKGGIRLSFSKNPLGVRNG 483
>gi|406694958|gb|EKC98273.1| hypothetical protein A1Q2_07287 [Trichosporon asahii var. asahii
CBS 8904]
Length = 865
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ + LFV+ LP ++ ++ +F + G E+R ++ + + FV++
Sbjct: 787 LPPN--NVLFVQNLPEGTTQDDLREVFEQYPGLVEIRTIAAKKD--------IAFVEYAD 836
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+A A DAL ++ D K+++ FAR
Sbjct: 837 ETASAVAKDALHNFKID----GETKMKVTFAR 864
>gi|149263421|ref|XP_995150.2| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 309
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 12/85 (14%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
LF+ LP + + ++ +F F G+KE LV PG + FV+F + A A
Sbjct: 211 ILFLTNLPEETNELMLSMLFTQFPGFKEAHLV------PGCH--DIAFVEFDNEVQAGAA 262
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+DALQG++ +++ +++ F +
Sbjct: 263 LDALQGFKITQNN----AMKISFVK 283
>gi|340517170|gb|EGR47415.1| predicted protein [Trichoderma reesei QM6a]
Length = 797
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFV 185
PP +++LFV L + +A IF P G+ R+ +K + + PG + FV+F
Sbjct: 563 PPAETASLFVRNLNFATTTNRLAEIFEPLDGFVSARVKTKIDPKRPGQTLSMGFGFVEFR 622
Query: 186 SPAHAATAMDALQGYRFDEH 205
S A A+ A+ GY D H
Sbjct: 623 SKDQAQAALKAMDGYVLDGH 642
>gi|406859405|gb|EKD12471.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 842
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 384 NTLYVGNLPIDTSEDELKAMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDVSFATK 436
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSGGG 227
A+ L G+ +SVK +RL F++ P G RSG G
Sbjct: 437 ALHELYGHPL----HNSVKGGIRLSFSKNPLGVRSGQG 470
>gi|145323766|ref|NP_001077472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189939|gb|AEE28060.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 200
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF+ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 122 MPPN--NILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAK---PG-----IAFVEYED 171
Query: 187 PAHAATAMDALQGYRFDEHD 206
++ AM ALQG++ +
Sbjct: 172 DVQSSMAMQALQGFKITPQN 191
>gi|323508363|emb|CBQ68234.1| related to small nuclear ribonucleoprotein snRNP U1A [Sporisorium
reilianum SRZ2]
Length = 291
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ +P + E+ +F + GY +V+ + PG + FV+F
Sbjct: 213 LPPN--KMLFLQNIPEGVGKGELESLFSAYSGYVDVQTI------PGKADI--AFVEFSD 262
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ATA AL GY F D KL++ FAR
Sbjct: 263 IPSSATARGALNGYNFGAGD----KLKITFAR 290
>gi|212723796|ref|NP_001132012.1| uncharacterized protein LOC100193418 [Zea mays]
gi|194693198|gb|ACF80683.1| unknown [Zea mays]
gi|413934627|gb|AFW69178.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
gi|413934628|gb|AFW69179.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 203
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 122 RSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
R+E LP D TLF+ GLP+D REV ++FR F GY VS R G
Sbjct: 46 RAEQALPARDEVRTLFIAGLPADAKPREVYNLFRDFPGY-----VSSHLR-TGKSSQAYA 99
Query: 181 FVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
F F A A+ A G FD S+ + L
Sbjct: 100 FAVFADQQSALAALSATNGMVFDLEKNCSLHVDL 133
>gi|21593001|gb|AAM64950.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
Length = 232
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF++ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 154 MPPN--NILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAK---PG-----IAFVEYED 203
Query: 187 PAHAATAMDALQGYRFDEHD 206
A+ AM LQG++ +
Sbjct: 204 DVQASIAMQPLQGFKITPQN 223
>gi|442619721|ref|NP_001014632.3| couch potato, isoform S [Drosophila melanogaster]
gi|440217575|gb|AAX52960.3| couch potato, isoform S [Drosophila melanogaster]
Length = 962
Score = 44.3 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L P + FV F + A A A
Sbjct: 443 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 500
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
LQG RFD ++ RL+FA+
Sbjct: 501 KQDLQGVRFDPDMPQTI--RLEFAK 523
>gi|385301643|gb|EIF45820.1| multiple rna-binding domain-containing protein 1 [Dekkera
bruxellensis AWRI1499]
Length = 136
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S+ + V+ LP + SR +V +F F K VR+ K R G FV+F + A
Sbjct: 13 STKIIVKNLPFEASRDDVFQLFSSFAHLKSVRVPKKFDRSARG----FAFVEFNTVKEAE 68
Query: 192 TAMDALQG 199
T MD LQG
Sbjct: 69 TVMDQLQG 76
>gi|195497499|ref|XP_002096126.1| GE25503 [Drosophila yakuba]
gi|194182227|gb|EDW95838.1| GE25503 [Drosophila yakuba]
Length = 1140
Score = 44.3 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L P + FV F + A A A
Sbjct: 461 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 518
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
LQG RFD ++ RL+FA+
Sbjct: 519 KQDLQGVRFDPDMPQTI--RLEFAK 541
>gi|297826425|ref|XP_002881095.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
lyrata]
gi|297326934|gb|EFH57354.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF++ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 154 MPPN--NILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAK---PG-----IAFVEYED 203
Query: 187 PAHAATAMDALQGYRFDEHD 206
A+ AM LQG++ +
Sbjct: 204 DVQASIAMQPLQGFKITPQN 223
>gi|452843907|gb|EME45842.1| hypothetical protein DOTSEDRAFT_71515 [Dothistroma septosporum
NZE10]
Length = 623
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GY+ + +K++ +CFV+F + A
Sbjct: 386 NTLYVGNLPVDTSEDELKSLFMKQRGYRRLCFRTKQNG-------PMCFVEFEDISFATK 438
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A++ L G+ +SVK +RL F++ P G R+G
Sbjct: 439 ALNELYGHPL----HNSVKGGIRLSFSKNPLGVRTG 470
>gi|295673056|ref|XP_002797074.1| multiple RNA-binding domain-containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226282446|gb|EEH38012.1| multiple RNA-binding domain-containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 806
Score = 44.3 bits (103), Expect = 0.044, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL--CFVDFVSPAH 189
+STLFV L + +A +F+P G+ R+ +K + G+ L + FV+F + A
Sbjct: 577 TSTLFVRNLNFSTTNVRLAEVFQPLDGFLSARVKTKPNPKRPGETLSMGFGFVEFRTSAQ 636
Query: 190 AATAMDALQGYRFDEHD 206
A A+ + GY+ D+H+
Sbjct: 637 ARAALATMNGYKLDQHE 653
>gi|242247219|ref|NP_001156146.1| U1 small nuclear ribonucleoprotein A-like [Acyrthosiphon pisum]
gi|239790514|dbj|BAH71814.1| ACYPI003668 [Acyrthosiphon pisum]
Length = 224
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Query: 117 GLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
G+ GG VP P + LF+ LP + + ++ +F F G+KEVRLV +RH
Sbjct: 137 GVSGGN--VPEQP-PNQILFLTNLPDETTEMMLSMLFNQFPGFKEVRLVP--NRHD---- 187
Query: 177 LILCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + + TA +L G++
Sbjct: 188 --IAFVEFENEHQSNTAKLSLNGFK 210
>gi|15227729|ref|NP_180585.1| U2 small nuclear ribonucleoprotein B'' [Arabidopsis thaliana]
gi|75318049|sp|O22922.1|RU2B1_ARATH RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|2347192|gb|AAC16931.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
gi|27765024|gb|AAO23633.1| At2g30260 [Arabidopsis thaliana]
gi|110743428|dbj|BAE99600.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
gi|330253269|gb|AEC08363.1| U2 small nuclear ribonucleoprotein B'' [Arabidopsis thaliana]
Length = 232
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF++ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 154 MPPN--NILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAK---PG-----IAFVEYED 203
Query: 187 PAHAATAMDALQGYRFDEHD 206
A+ AM LQG++ +
Sbjct: 204 DVQASIAMQPLQGFKITPQN 223
>gi|393233936|gb|EJD41503.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 249
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP ++ ++ +F + EVRL+ + + FV++V
Sbjct: 171 LPPN--KILFLQNLPDSVTKDQLVTLFSQYPNLHEVRLIPTKKD--------IAFVEYVD 220
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A +AL Y+ D K+++ FAR
Sbjct: 221 EGSATVAKEALHNYKLD----GETKIKVTFAR 248
>gi|48429205|sp|Q01617.3|CPO_DROME RecName: Full=Protein couch potato
Length = 738
Score = 44.3 bits (103), Expect = 0.045, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L P + FV F + A A A
Sbjct: 452 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 509
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
LQG RFD ++ RL+FA+
Sbjct: 510 KQDLQGVRFDPDMPQTI--RLEFAK 532
>gi|442619713|ref|NP_001262688.1| couch potato, isoform O [Drosophila melanogaster]
gi|440217571|gb|AGB96068.1| couch potato, isoform O [Drosophila melanogaster]
Length = 748
Score = 44.3 bits (103), Expect = 0.046, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L P + FV F + A A A
Sbjct: 443 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 500
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
LQG RFD ++ RL+FA+
Sbjct: 501 KQDLQGVRFDPDMPQTI--RLEFAK 523
>gi|391342685|ref|XP_003745646.1| PREDICTED: uncharacterized protein LOC100903800 [Metaseiulus
occidentalis]
Length = 319
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 28 TLFVSGLPMDAKPRELYLLFRAYKGY-EGSLLKVTSKN-GKTSSPVGFVTFSTRAGAEAA 85
Query: 194 MDAL-QGYRFDEHDRDSVKLRLQFAR 218
L QG RFD ++ RL+FA+
Sbjct: 86 KQELQQGVRFDPDLPQTI--RLEFAK 109
>gi|384251055|gb|EIE24533.1| U1 small nuclear ribonucleo protein A [Coccomyxa subellipsoidea
C-169]
Length = 224
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
LFV+ LP + + +A +F+ + GY E R+V E+R PG + FV+F A
Sbjct: 150 KILFVQNLPEETTSAMLALLFQQYAGYIETRMV--EAR-PG-----IAFVEFEDEDKATV 201
Query: 193 AMDALQGYRF 202
AM LQG++
Sbjct: 202 AMAGLQGFKI 211
>gi|339255862|ref|XP_003370674.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316965776|gb|EFV50450.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 220
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G V P + LF LP + + + +F F G+KEVRLV +RH
Sbjct: 136 GTNYVSVESNPPPNKILFCTNLPEEATEHMLQMLFNQFPGFKEVRLVP--NRHD------ 187
Query: 179 LCFVDFVSPAHAATAMDALQGYR 201
+ FV+F + + TA D LQ ++
Sbjct: 188 IAFVEFDNEYQSKTARDTLQNFK 210
>gi|321460285|gb|EFX71329.1| sans fille-like protein [Daphnia pulex]
Length = 227
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 150 PPN--QILFLTNLPEETNEMMLSMLFTQFPGFKEVRLVP--GRHD------IAFVEFENE 199
Query: 188 AHAATAMDALQGYR 201
+A A ++LQG++
Sbjct: 200 VQSAGARESLQGFK 213
>gi|328352765|emb|CCA39163.1| Protein WHI4 [Komagataella pastoris CBS 7435]
Length = 496
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI--LCFVDFVSPAHA 190
+TL+V LP D + E+ +F P G++ + +K S +CFV+F S A
Sbjct: 382 NTLYVGNLPGDATEAELRSLFTPVKGFRRLSFKNKTSISGSSGGGGGPMCFVEFNSITEA 441
Query: 191 ATAMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSGGGHRG 230
A A+ L G R S K +RL F++ P G R+ R
Sbjct: 442 AEALANLYGTSL----RCSSKGGIRLSFSKNPLGVRNSNNRRN 480
>gi|254572223|ref|XP_002493221.1| RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci
[Komagataella pastoris GS115]
gi|238033019|emb|CAY71042.1| RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci
[Komagataella pastoris GS115]
Length = 497
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI--LCFVDFVSPAHA 190
+TL+V LP D + E+ +F P G++ + +K S +CFV+F S A
Sbjct: 383 NTLYVGNLPGDATEAELRSLFTPVKGFRRLSFKNKTSISGSSGGGGGPMCFVEFNSITEA 442
Query: 191 ATAMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSGGGHRG 230
A A+ L G R S K +RL F++ P G R+ R
Sbjct: 443 AEALANLYGTSL----RCSSKGGIRLSFSKNPLGVRNSNNRRN 481
>gi|70933887|ref|XP_738251.1| small nuclear ribonucleoprotein (snRNP) [Plasmodium chabaudi
chabaudi]
gi|56514315|emb|CAH82541.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
chabaudi chabaudi]
Length = 107
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV+ LP + ++ + +F + G+ EVR + PG + + F+DF S + A
Sbjct: 36 TLFVQNLPDEINKNALEILFNQYPGFSEVRYI------PGRN---VAFIDFNSYQNGEVA 86
Query: 194 MDALQGYRFD-EH 205
M+ LQ ++ EH
Sbjct: 87 MNGLQSFKITPEH 99
>gi|407923615|gb|EKG16684.1| hypothetical protein MPH_06138 [Macrophomina phaseolina MS6]
Length = 117
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 109 PSAKDRALGL---GGGRSEVP---LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEV 162
P+ K R GL GG + +P LPP+ LFV+ LP ++ IF F G+KEV
Sbjct: 14 PTQKARGAGLKSTGGAAAVIPDEYLPPN--KILFVQNLPDGYDVEALSAIFGRFEGFKEV 71
Query: 163 RLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDR 207
RLV S + FV++ + A A +A +A G + +
Sbjct: 72 RLVPGRSG--------IAFVEYEAEAGAISAKEATAGMALGDEGK 108
>gi|388855173|emb|CCF51304.1| related to small nuclear ribonucleoprotein snRNP U1A [Ustilago
hordei]
Length = 297
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 17/101 (16%)
Query: 121 GRSEVP---LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
+ E+P LPP+ TLF++ +P + E+ +F + GY +V+ + PG
Sbjct: 210 AQQEMPDEYLPPN--KTLFLQNIPDGVGKGELESLFSAYSGYVDVQTI------PGKAD- 260
Query: 178 ILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ FV++ + TA AL GY F D KL++ FAR
Sbjct: 261 -IAFVEYADIPSSVTARGALNGYNFGAGD----KLKITFAR 296
>gi|347966393|ref|XP_003435906.1| AGAP013145-PA [Anopheles gambiae str. PEST]
gi|333470078|gb|EGK97506.1| AGAP013145-PA [Anopheles gambiae str. PEST]
Length = 411
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA-AT 192
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 249 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFNTRAGAEAA 306
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
D QG RFD ++ RL+FA+
Sbjct: 307 KQDLQQGVRFDPDMPQTI--RLEFAK 330
>gi|225716164|gb|ACO13928.1| RNA-binding protein with multiple splicing [Esox lucius]
Length = 100
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A
Sbjct: 22 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRTGAEAA 74
Query: 194 MDALQ 198
+AL
Sbjct: 75 KNALN 79
>gi|398405022|ref|XP_003853977.1| hypothetical protein MYCGRDRAFT_38046 [Zymoseptoria tritici IPO323]
gi|339473860|gb|EGP88953.1| hypothetical protein MYCGRDRAFT_38046 [Zymoseptoria tritici IPO323]
Length = 499
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 306 NTLYVGNLPIDTSEDELKSLFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 358
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
+ L G+ H+ +RL F++ P G RSG
Sbjct: 359 TLHELYGHPL--HNSVKGGIRLSFSKNPLGVRSG 390
>gi|302834225|ref|XP_002948675.1| hypothetical protein VOLCADRAFT_104008 [Volvox carteri f.
nagariensis]
gi|300265866|gb|EFJ50055.1| hypothetical protein VOLCADRAFT_104008 [Volvox carteri f.
nagariensis]
Length = 332
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T+FV G P+D RE+ ++ R GY+ ++ + G F F + A A A
Sbjct: 67 TIFVTGFPADVKERELNNLLRFLPGYEASQMNYSKGAAQG-------FALFNTGAMARAA 119
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
D LQ RFDE+ LR + AR
Sbjct: 120 CDQLQHVRFDENS----SLRCEMAR 140
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 110 SAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES 169
SA R+ G GG R + P +TLFV L E+ ++F G+++++L+
Sbjct: 188 SAGARSGGDGGSRDDNP----PCNTLFVGNLSETVDENELRNLFGGAPGFRQLKLMR--- 240
Query: 170 RHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGAR 223
G L FV+F A A A QG DR + R+Q+++ P R
Sbjct: 241 ----GPKATLGFVEFDDVPTAMAAHAAQQGAVLASSDRGPI--RVQYSKNPFGR 288
>gi|356526326|ref|XP_003531769.1| PREDICTED: uncharacterized protein LOC100817421 [Glycine max]
Length = 318
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T+F+ GLP D RE+ ++ R G++ +L K + G F F +P A TA
Sbjct: 41 TIFITGLPEDVKERELQNLLRWLPGFEASQLNFKAEKPMG-------FALFSAPHQALTA 93
Query: 194 MDALQGYRFDEHDR-----DSVKLRLQFARYPGARSGGGHRGKR 232
D LQ FD + + K L R GA +G + KR
Sbjct: 94 KDILQDMLFDPDTKSVLHTEMAKKNLFVKRGIGADAGAFDQSKR 137
>gi|344229622|gb|EGV61507.1| hypothetical protein CANTEDRAFT_94398 [Candida tenuis ATCC 10573]
Length = 526
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 23/123 (18%)
Query: 119 GGGRSEVP-------LPPDAS--------STLFVEGLPSDCSRREVAHIFRPFVGYKEVR 163
GG R +VP +PP A+ +TL+V LP D + +E+ +F P G++ +
Sbjct: 378 GGARKDVPDLSLLARVPPPANPADQNPPCNTLYVGNLPPDATEQELRALFSPQKGFRRLS 437
Query: 164 LVSKESRHPGGD----PLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVK--LRLQFA 217
+K + G P +CFV+F AHA A+ L G + K +RL F+
Sbjct: 438 FRTKANASGSGSNNHGP--MCFVEFEDVAHATRALAELYGRILPRPSSSNGKGGIRLSFS 495
Query: 218 RYP 220
+ P
Sbjct: 496 KNP 498
>gi|340519782|gb|EGR50020.1| predicted protein [Trichoderma reesei QM6a]
Length = 660
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D E+ +F GYK + K H G +CFV++ AHA
Sbjct: 445 NTLYVGNLPMDACEDELKVLFSLTKGYKRMCFRIK---HNG----PMCFVEYEDIAHATK 497
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARS 224
A+ L Y F H+ +RL F++ P G RS
Sbjct: 498 ALTTL--YGFPLHNSVKGGIRLSFSKNPLGVRS 528
>gi|442619715|ref|NP_001262689.1| couch potato, isoform P [Drosophila melanogaster]
gi|440217572|gb|AGB96069.1| couch potato, isoform P [Drosophila melanogaster]
Length = 841
Score = 43.9 bits (102), Expect = 0.052, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L P + FV F + A A A
Sbjct: 443 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 500
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
LQG RFD ++ RL+FA+
Sbjct: 501 KQDLQGVRFDPDMPQTI--RLEFAK 523
>gi|442619717|ref|NP_001262690.1| couch potato, isoform Q [Drosophila melanogaster]
gi|440217573|gb|AGB96070.1| couch potato, isoform Q [Drosophila melanogaster]
Length = 762
Score = 43.9 bits (102), Expect = 0.054, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L P + FV F + A A A
Sbjct: 443 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 500
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
LQG RFD ++ RL+FA+
Sbjct: 501 KQDLQGVRFDPDMPQTI--RLEFAK 523
>gi|8954049|gb|AAF82223.1|AC067971_31 Strong similarity to a small nuclear ribonucleoprotein U2B'' -
potato from Solanum tuberosum gb|M72892. It contains an
RNA recognition motif PF|00076. ESTs gb|AA041158 and
gb|AI992475 come from this gene [Arabidopsis thaliana]
Length = 247
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF+ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 169 MPPN--NILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAK---PG-----IAFVEYED 218
Query: 187 PAHAATAMDALQGYRFDEHD 206
++ AM ALQG++ +
Sbjct: 219 DVQSSMAMQALQGFKITPQN 238
>gi|156366101|ref|XP_001626979.1| predicted protein [Nematostella vectensis]
gi|156213874|gb|EDO34879.1| predicted protein [Nematostella vectensis]
Length = 335
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 13/95 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPF---VGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
++ L++ GLP D EV +F+PF + K ++ VS E R G FV F
Sbjct: 95 NANLYISGLPKDMKEEEVEALFKPFGKIITSKVLKDVSGEGRGTG-------FVRFDKRC 147
Query: 189 HAATAMDALQGYRFDEHDRDSVKLRLQFARYPGAR 223
A TA+D L + VKL ++FA P +R
Sbjct: 148 EAQTAIDDLNNKTLPGTN---VKLTVKFANPPNSR 179
>gi|70947892|ref|XP_743519.1| u1 small nuclear ribonucleoprotein a [Plasmodium chabaudi chabaudi]
gi|56523052|emb|CAH75488.1| u1 small nuclear ribonucleoprotein a, putative [Plasmodium chabaudi
chabaudi]
Length = 444
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 14/84 (16%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFVE + + + IF+ F G+ E R++ + + + FVD+ + A +AM
Sbjct: 374 LFVENVDENVNTEAFNDIFKAFSGFVEARIIPQRN---------VAFVDYTDESSATSAM 424
Query: 195 DALQGYRFDEHDRDSVKLRLQFAR 218
ALQ Y KL++ +A+
Sbjct: 425 KALQDYEL-----QGSKLKISYAK 443
>gi|30679897|ref|NP_172177.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189938|gb|AEE28059.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 228
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF+ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 150 MPPN--NILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAK---PG-----IAFVEYED 199
Query: 187 PAHAATAMDALQGYRFDEHD 206
++ AM ALQG++ +
Sbjct: 200 DVQSSMAMQALQGFKITPQN 219
>gi|449279242|gb|EMC86877.1| Squamous cell carcinoma antigen recognized by T-cells 3, partial
[Columba livia]
Length = 875
Score = 43.9 bits (102), Expect = 0.058, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ GLP C++ E+ + + K++RLV+ + P G L +V+F + A A+ A+
Sbjct: 715 LFISGLPFSCTKEELEEVCKAHGNVKDIRLVTNRAGKPKG----LAYVEFENEAQASQAV 770
Query: 195 DALQGYRFDEH 205
+ G EH
Sbjct: 771 LKMDGLTVKEH 781
>gi|226498478|ref|NP_001144860.1| uncharacterized protein LOC100277950 [Zea mays]
gi|195648000|gb|ACG43468.1| hypothetical protein [Zea mays]
Length = 254
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
GG R +P ++ LFV+ LP + + + +F + G+KEVR++ + PG
Sbjct: 166 GGQRVMMPEIIVPNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMIEAK---PG----- 217
Query: 179 LCFVDFVSPAHAATAMDALQGYRFDEHDRDSV 210
+ FV++ AM+ LQ ++ + ++ +
Sbjct: 218 IAFVEYGDETQVTAAMNNLQSFKITKENQMVI 249
>gi|30679892|ref|NP_850936.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75329133|sp|Q8H1S6.1|RU2B2_ARATH RecName: Full=U2 small nuclear ribonucleoprotein B'' 2; Short=U2
snRNP B'' 2
gi|23296313|gb|AAN13038.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana]
gi|332189937|gb|AEE28058.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 229
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 10/80 (12%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF+ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 151 MPPN--NILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAK---PG-----IAFVEYED 200
Query: 187 PAHAATAMDALQGYRFDEHD 206
++ AM ALQG++ +
Sbjct: 201 DVQSSMAMQALQGFKITPQN 220
>gi|380012874|ref|XP_003690499.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Apis florea]
Length = 902
Score = 43.5 bits (101), Expect = 0.060, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP ++ E+ IF+ KEVR+V+ + H G L +V+F+ AA A+
Sbjct: 755 LFVKGLPVSTTKEELEEIFKVHGALKEVRIVTYRNGHSKG----LAYVEFMDENSAAKAL 810
Query: 195 DALQGYR 201
A G +
Sbjct: 811 LATDGMK 817
>gi|347966391|ref|XP_003435905.1| AGAP013145-PB [Anopheles gambiae str. PEST]
gi|333470079|gb|EGK97507.1| AGAP013145-PB [Anopheles gambiae str. PEST]
Length = 515
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA-AT 192
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 249 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFNTRAGAEAA 306
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
D QG RFD ++ RL+FA+
Sbjct: 307 KQDLQQGVRFDPDMPQTI--RLEFAK 330
>gi|425772895|gb|EKV11275.1| hypothetical protein PDIG_51110 [Penicillium digitatum PHI26]
gi|425782122|gb|EKV20050.1| hypothetical protein PDIP_20330 [Penicillium digitatum Pd1]
Length = 835
Score = 43.5 bits (101), Expect = 0.065, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 108 GPSAKDRALGLGGGRSEVPLPPD---ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
P + + G + PD A++TLFV+ L + + +FR G+ R+
Sbjct: 580 APETRGKDQGFSTADTFAADEPDDSVATTTLFVKNLNFSTTNEKFLEVFRSLDGFITGRI 639
Query: 165 VSK-ESRHPGGD-PLILCFVDFVSPAHAATAMDALQGYRFDEHD 206
+K + + PG + F DF + A A A+ A+ GY+ D+H+
Sbjct: 640 KTKPDPKRPGQTLSMGFAFADFKTKAQAQAALSAMNGYKLDQHE 683
>gi|242207485|ref|XP_002469596.1| predicted protein [Postia placenta Mad-698-R]
gi|220731400|gb|EED85245.1| predicted protein [Postia placenta Mad-698-R]
Length = 231
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP S+ ++ +F + EVRL+ + + FV+++
Sbjct: 153 LPPN--KILFLQNLPDSVSKDQLMALFSQYPNLYEVRLIPTKKD--------IAFVEYMD 202
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRL 214
A A DAL Y+ D ++ LRL
Sbjct: 203 EGSATVAKDALHNYKLDGENKIKACLRL 230
>gi|347966395|ref|XP_003435907.1| AGAP013145-PC [Anopheles gambiae str. PEST]
gi|333470080|gb|EGK97508.1| AGAP013145-PC [Anopheles gambiae str. PEST]
Length = 243
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA-AT 192
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 81 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFNTRAGAEAA 138
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
D QG RFD ++ RL+FA+
Sbjct: 139 KQDLQQGVRFDPDMPQTI--RLEFAK 162
>gi|168054248|ref|XP_001779544.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669025|gb|EDQ55620.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T+FV G PSD RE+ ++ R + GY E ++ + P G F F + A A A
Sbjct: 5 TIFVLGFPSDVKERELQNLLRWWPGY-EASQMNFKCDQPMG------FALFSTVAMAMAA 57
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
DALQ FD D +SV LR + A+
Sbjct: 58 RDALQNLVFDA-DTNSV-LRAEMAK 80
>gi|19075417|ref|NP_587917.1| RNA-binding protein Scw1 [Schizosaccharomyces pombe 972h-]
gi|26399672|sp|O74452.1|SCW1_SCHPO RecName: Full=Cell wall integrity protein scw1; AltName:
Full=Strong cell wall protein 1
gi|3560261|emb|CAA20746.1| RNA-binding protein Scw1 [Schizosaccharomyces pombe]
Length = 561
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+T++V LP S E+ +F VGYK + +K G P +CFV+F + +A
Sbjct: 426 NTIYVGNLPPSTSEEELKVLFSTQVGYKRLCFRTK-----GNGP--MCFVEFENIPYAME 478
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP 220
A+ LQG S+K +RL F++ P
Sbjct: 479 ALKNLQGVCLS----SSIKGGIRLSFSKNP 504
>gi|407922123|gb|EKG15250.1| hypothetical protein MPH_07584 [Macrophomina phaseolina MS6]
Length = 589
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K + +CFV+F + A
Sbjct: 400 NTLYVGNLPIDTSEDELKAMFSKQRGYKRLCFRTKANGP-------MCFVEFEDVSFATK 452
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ L G+ H+ +RL F++ P G R+G
Sbjct: 453 ALNELYGHPL--HNSVKGGIRLSFSKNPLGVRNG 484
>gi|402075260|gb|EJT70731.1| RNA binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 620
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ F GYK + +K++ +CFV+F + A
Sbjct: 431 NTLYVGNLPIDTSEEELKATFSKQRGYKRLCFRTKQNGP-------MCFVEFEDVSFATK 483
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A+ L G+ H+ +RL F++ P G RSG
Sbjct: 484 ALHDLYGHML--HNSVKGGIRLSFSKNPLGVRSG 515
>gi|366994380|ref|XP_003676954.1| hypothetical protein NCAS_0F01150 [Naumovozyma castellii CBS 4309]
gi|342302822|emb|CCC70599.1| hypothetical protein NCAS_0F01150 [Naumovozyma castellii CBS 4309]
Length = 379
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
+++ LFV P D E+ IF PF KEV++++ FV+F A
Sbjct: 81 STTRLFVRPFPFDVQEAELNEIFTPFGPMKEVKILNG-----------FAFVEFEEADSA 129
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARY 219
A A++ + G F + V +L RY
Sbjct: 130 AKAIEEVNGKTFANQPLEVVYSKLPVKRY 158
>gi|367008274|ref|XP_003678637.1| hypothetical protein TDEL_0A00940 [Torulaspora delbrueckii]
gi|359746294|emb|CCE89426.1| hypothetical protein TDEL_0A00940 [Torulaspora delbrueckii]
Length = 682
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + +E+ H+F G++ + +K S G P +CFV+F + A
Sbjct: 553 NTLYVGNLPPDTTEQELRHLFSGQQGFRRLSFRNKNSNGNGHGP--MCFVEFEDVSFATR 610
Query: 193 AMDALQGYRFDEHDRDSV-KLRLQFARYPGARSGGGHR 229
A+ L G + + +RL F++ P G +R
Sbjct: 611 ALAELYGSQLPRASASNKGGIRLSFSKNPLGVRGPNNR 648
>gi|322701438|gb|EFY93188.1| hypothetical protein MAC_00971 [Metarhizium acridum CQMa 102]
Length = 567
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 377 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGP-------MCFVEFEDVSFATK 429
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A+ L G +SVK +RL F++ P G RSG
Sbjct: 430 ALHELYGQPL----HNSVKGGIRLSFSKNPLGVRSG 461
>gi|68074359|ref|XP_679094.1| u1 small nuclear ribonucleoprotein a [Plasmodium berghei strain
ANKA]
gi|56499751|emb|CAH97936.1| u1 small nuclear ribonucleoprotein a, putative [Plasmodium berghei]
Length = 371
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
LFVE + + + IF+ F G+ E R++ + + + FVD+ + A +A
Sbjct: 300 ILFVENVDENVNTEAFNDIFKAFSGFVEARIIPQRN---------VAFVDYTDESSATSA 350
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
M ALQ Y KL++ +A+
Sbjct: 351 MKALQNYEL-----QGSKLKISYAK 370
>gi|358058378|dbj|GAA95897.1| hypothetical protein E5Q_02555 [Mixia osmundae IAM 14324]
Length = 680
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+STL ++ +P + S++E+ +F+ + K +R+ K RH G FV+F S A A
Sbjct: 570 TSTLVIKNVPFEVSKKELQALFKSYGNIKSLRMPRKADRHTRG----FAFVEFRSTAEAK 625
Query: 192 TAMDAL 197
A AL
Sbjct: 626 EAKQAL 631
>gi|157139408|ref|XP_001647574.1| RNA binding motif protein [Aedes aegypti]
gi|108865819|gb|EAT32242.1| AAEL015645-PA [Aedes aegypti]
Length = 263
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 13/106 (12%)
Query: 100 VGIGGMDPGPSAKDRALGLGG---GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
V I G S DR L GR L + + V +P + +E+ +F+ F
Sbjct: 87 VHIDGRKVELSRSDRTLNTEADTHGRKASKLKKQTGTKILVRNVPFQANAKEIRDLFKVF 146
Query: 157 VGYKEVRL-----VSKESRHPGGDPLILCFVDFVSPAHAATAMDAL 197
K VRL S + H G CFVDFV+ A A +AL
Sbjct: 147 GELKSVRLPRKMVSSADESHRG-----FCFVDFVTENDAKQAFEAL 187
>gi|19347861|gb|AAL85989.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana]
Length = 228
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 42/76 (55%), Gaps = 10/76 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF+ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 150 MPPN--NILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAK---PG-----IAFVEYED 199
Query: 187 PAHAATAMDALQGYRF 202
++ AM ALQG++
Sbjct: 200 DVQSSMAMQALQGFKI 215
>gi|307202627|gb|EFN81948.1| Protein couch potato [Harpegnathos saltator]
Length = 189
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S E+ IF F G+ +R+ +K GG P+ F+++ +AA
Sbjct: 91 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFIEYQDVRYAAQ 143
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYPGARSG 225
AM LQG DR ++ R+++A+ A G
Sbjct: 144 AMATLQGSFLLSSDRGAI--RIEYAKSKMAEVG 174
>gi|68066442|ref|XP_675204.1| small nuclear ribonucleoprotein [Plasmodium berghei strain ANKA]
gi|56494251|emb|CAH97133.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
berghei]
Length = 192
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV+ LP + ++ + +F + G+ EVR + PG + + F+DF S + A
Sbjct: 121 TLFVQNLPDEINKNALEILFNQYPGFSEVRYI------PGRN---VAFIDFNSYQNGEVA 171
Query: 194 MDALQGYRFD-EH 205
M+ LQ ++ EH
Sbjct: 172 MNGLQSFKITPEH 184
>gi|322709618|gb|EFZ01194.1| RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 564
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 375 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGP-------MCFVEFEDVSFATK 427
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A+ L G +SVK +RL F++ P G RSG
Sbjct: 428 ALHELYGQPL----HNSVKGGIRLSFSKNPLGVRSG 459
>gi|255553401|ref|XP_002517742.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
gi|223543140|gb|EEF44674.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
Length = 233
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ + LF++ LP + + + +F+ + G++EVR++ + PG + FV+F
Sbjct: 156 PPN--NILFIQNLPHETTSMMLQVLFQQYPGFREVRMIEAK---PG-----IAFVEFEDD 205
Query: 188 AHAATAMDALQGYRFDEHD 206
++ AM ALQ ++ +
Sbjct: 206 VQSSMAMQALQSFKITPQN 224
>gi|410075077|ref|XP_003955121.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
gi|372461703|emb|CCF55986.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
Length = 850
Score = 43.5 bits (101), Expect = 0.078, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 722 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 777
Query: 192 TAMDALQG 199
AMD LQG
Sbjct: 778 AAMDQLQG 785
>gi|226488853|emb|CAX74776.1| U1 small nuclear ribonucleoprotein A [Schistosoma japonicum]
Length = 333
Score = 43.1 bits (100), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP D ++ +F F GY+EVR+V RH + FV+F +
Sbjct: 256 PPN--KILFLTNLPDDSDEAMLSMLFGQFTGYREVRMVP--GRHD------IAFVEFGNE 305
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A+ A LQG+ R +R+ FA+
Sbjct: 306 VEASAAKLGLQGFNI----RPGQAIRITFAK 332
>gi|302921099|ref|XP_003053217.1| hypothetical protein NECHADRAFT_67581 [Nectria haematococca mpVI
77-13-4]
gi|256734157|gb|EEU47504.1| hypothetical protein NECHADRAFT_67581 [Nectria haematococca mpVI
77-13-4]
Length = 574
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP+D S E+ +F GYK + +K + +CFV+F + A
Sbjct: 292 NTLYVGNLPADTSEEELKALFIKQRGYKRLCFRTKANG-------PMCFVEFEEVSFATK 344
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A+ L G+ H+ +RL F++ P G RS
Sbjct: 345 ALHDLYGHPL--HNSTKGGIRLSFSKNPLGVRSN 376
>gi|331231467|ref|XP_003328397.1| hypothetical protein PGTG_09691 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307387|gb|EFP83978.1| hypothetical protein PGTG_09691 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 315
Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF++ LP + + + +F+ + EVR + S + FV++V
Sbjct: 238 PPN--KILFIQNLPENAGKDALEVLFKQYPNLVEVRTIPGRSN--------IAFVEYVDA 287
Query: 188 AHAATAMDALQGYRFD-EHDRDSVKLRLQFAR 218
+ A DAL Y+FD EH K+++ FA+
Sbjct: 288 TSSGVAKDALHNYKFDGEH-----KIKVTFAK 314
>gi|47226485|emb|CAG08501.1| unnamed protein product [Tetraodon nigroviridis]
Length = 909
Score = 43.1 bits (100), Expect = 0.082, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+F+ GLP C++ ++ + + + K+VRLV+ S P G L +V+F HA+ A+
Sbjct: 748 IFISGLPFSCTKEQLKEVCKSYGTIKDVRLVTYRSGKPKG----LAYVEFTEETHASQAV 803
Query: 195 DALQGYRFD 203
+ G D
Sbjct: 804 LKMDGMVID 812
>gi|224084380|ref|XP_002307278.1| predicted protein [Populus trichocarpa]
gi|222856727|gb|EEE94274.1| predicted protein [Populus trichocarpa]
Length = 97
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D LFV GLP D E+ +FR F GY+ L R P + F F
Sbjct: 8 DQVRILFVAGLPDDIKPSEIYSLFREFPGYESSHL-----RSPSQNSQPFAFATFADQPS 62
Query: 190 AATAMDALQGYRFD 203
A AM AL G FD
Sbjct: 63 AVAAMHALNGMVFD 76
>gi|115462171|ref|NP_001054685.1| Os05g0154800 [Oryza sativa Japonica Group]
gi|122169518|sp|Q0DKM4.1|RU1A_ORYSJ RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|384950745|sp|A2Y0J7.1|RU1A_ORYSI RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|113578236|dbj|BAF16599.1| Os05g0154800 [Oryza sativa Japonica Group]
gi|125550898|gb|EAY96607.1| hypothetical protein OsI_18512 [Oryza sativa Indica Group]
gi|222630249|gb|EEE62381.1| hypothetical protein OsJ_17170 [Oryza sativa Japonica Group]
Length = 253
Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 11/84 (13%)
Query: 124 EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVD 183
E+ +P ++ LFV+ LP + + + +F + G+KEVR+V + PG + FV+
Sbjct: 173 EIIVP---NNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAK---PG-----IAFVE 221
Query: 184 FVSPAHAATAMDALQGYRFDEHDR 207
+ A AM+ LQG++ + ++
Sbjct: 222 YGDEGQATAAMNHLQGFKITKDNQ 245
>gi|156837691|ref|XP_001642865.1| hypothetical protein Kpol_400p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156113441|gb|EDO15007.1| hypothetical protein Kpol_400p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 600
Score = 43.1 bits (100), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + +E+ +F G++ + +K S G P +CFV+F + A
Sbjct: 459 NTLYVGNLPPDATEQELRQLFSSQQGFRRLSFRNKNSNGNGHGP--MCFVEFEDASFATV 516
Query: 193 AMDALQGYRFDEHDRDSVK----LRLQFARYP 220
A+ L G + R +V +RL F++ P
Sbjct: 517 ALAELYGSQL---PRSTVSNKGGIRLSFSKNP 545
>gi|313219885|emb|CBY30800.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV-SKESRHPGGDPLILCFVDFVSPAH 189
+++ +FV+ LP + + + +F F + EVR+ SK R F+++ +
Sbjct: 240 SNNIIFVQDLPEEVDEKMLTALFNQFDNFMEVRMAPSKTGRA--------AFIEYTNERS 291
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFAR 218
AA A D LQG++ + +L++ FA+
Sbjct: 292 AANAKDTLQGFKVT----PTTQLKITFAK 316
>gi|226469924|emb|CAX70243.1| U1 small nuclear ribonucleoprotein A [Schistosoma japonicum]
gi|226488855|emb|CAX74777.1| U1 small nuclear ribonucleoprotein A [Schistosoma japonicum]
Length = 333
Score = 43.1 bits (100), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP D ++ +F F GY+EVR+V RH + FV+F +
Sbjct: 256 PPN--KILFLTNLPDDSDEAMLSMLFGQFTGYREVRMVP--GRHD------IAFVEFGNE 305
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A+ A LQG+ R +R+ FA+
Sbjct: 306 VEASAAKLGLQGFNI----RPGQAIRITFAK 332
>gi|218197597|gb|EEC80024.1| hypothetical protein OsI_21699 [Oryza sativa Indica Group]
Length = 315
Score = 43.1 bits (100), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP STLFV L C+ E+ + G+ +++ R GG P+ F DF
Sbjct: 229 IPP--CSTLFVANLGHSCTEEELKEVLSKQPGFHLLKM-----RRRGGMPV--AFADFTD 279
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ AMDALQG D D L++++AR
Sbjct: 280 IESSTAAMDALQGTVLASSDADG--LQIEYAR 309
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +F G+ L + G ++ FV FV+ A +A
Sbjct: 33 TLFVAGLPDDVKPREIHKLFSSRPGFDHCLL-----EYTGRGNQVVAFVSFVNHQAALSA 87
Query: 194 MDALQ----GYRFDEH 205
M AL G ++ +H
Sbjct: 88 MSALNYVIPGVKYPDH 103
>gi|429852927|gb|ELA28038.1| RNA binding protein [Colletotrichum gloeosporioides Nara gc5]
Length = 518
Score = 43.1 bits (100), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 338 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGP-------MCFVEFEDVSFATK 390
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A+ L G H+ +RL F++ P G RSG
Sbjct: 391 ALHDLYGQPL--HNSVKGGIRLSFSKNPLGVRSG 422
>gi|391867843|gb|EIT77082.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 826
Score = 43.1 bits (100), Expect = 0.090, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVSPAHAA 191
TLFV+ L D + +F+P G+ R+ +K + + PG + FVDF + A
Sbjct: 600 TLFVKNLNFDTTNARFVEVFQPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTKDQAQ 659
Query: 192 TAMDALQGYRFDEH 205
A+ A+ GY+ D+H
Sbjct: 660 AALAAMNGYKLDQH 673
>gi|259149165|emb|CAY82407.1| Whi3p [Saccharomyces cerevisiae EC1118]
gi|365763510|gb|EHN05038.1| Whi3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 661
Score = 43.1 bits (100), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGYRFDEHDRDSVK----LRLQFARYP-GARSGGGHRG 230
A+ L G + R +V +RL F++ P G R RG
Sbjct: 598 ALAELYGTQL---PRSTVSSKGGIRLSFSKNPLGVRGPNSRRG 637
>gi|238486470|ref|XP_002374473.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
gi|220699352|gb|EED55691.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
Length = 826
Score = 43.1 bits (100), Expect = 0.091, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVSPAHAA 191
TLFV+ L D + +F+P G+ R+ +K + + PG + FVDF + A
Sbjct: 600 TLFVKNLNFDTTNARFVEVFQPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTKDQAQ 659
Query: 192 TAMDALQGYRFDEH 205
A+ A+ GY+ D+H
Sbjct: 660 AALAAMNGYKLDQH 673
>gi|170052648|ref|XP_001862318.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873473|gb|EDS36856.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 175
Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 126 PLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFV 185
P PP TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F
Sbjct: 4 PFPPQVR-TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFS 60
Query: 186 SPAHA-ATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ + A A D QG RFD ++ RL+FA+
Sbjct: 61 TRSGAEAAKQDLQQGVRFDPDMPQTI--RLEFAK 92
>gi|344257423|gb|EGW13527.1| U2 small nuclear ribonucleoprotein B'' [Cricetulus griseus]
Length = 113
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEV L+ RH + FV+F + A A
Sbjct: 41 LFLNNLPEETNEMMLSMLFNQFPGFKEVCLIP--GRHD------IAFVEFENDGQAGAAR 92
Query: 195 DALQGYRF 202
DALQG++
Sbjct: 93 DALQGFKI 100
>gi|222634965|gb|EEE65097.1| hypothetical protein OsJ_20145 [Oryza sativa Japonica Group]
Length = 315
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP STLFV L C+ E+ + G+ +++ R GG P+ F DF
Sbjct: 229 IPP--CSTLFVANLGHSCTEEELKEVLSKQPGFHLLKM-----RRRGGMPV--AFADFTD 279
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ AMDALQG D D L++++AR
Sbjct: 280 IESSTAAMDALQGTVLASSDADG--LQIEYAR 309
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ ++F G+ L + G ++ FV FV+ A +A
Sbjct: 33 TLFVAGLPDDVKPREIHNLFSSRPGFDHCLL-----EYTGRGNQVVAFVSFVNHQAALSA 87
Query: 194 MDALQ----GYRFDEH 205
M AL G ++ +H
Sbjct: 88 MSALNYVIPGVKYPDH 103
>gi|67901426|ref|XP_680969.1| hypothetical protein AN7700.2 [Aspergillus nidulans FGSC A4]
gi|40742696|gb|EAA61886.1| hypothetical protein AN7700.2 [Aspergillus nidulans FGSC A4]
gi|259484045|tpe|CBF79932.1| TPA: RNA binding protein (AFU_orthologue; AFUA_5G08330)
[Aspergillus nidulans FGSC A4]
Length = 628
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D E+ +F GYK + +K++ +CFV+F A
Sbjct: 413 NTLYVGNLPPDTQEEELKALFSKQRGYKRLCFRNKQNG-------PMCFVEFEDVRTAGK 465
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP 220
++ L GY+ +S+K +RL F++ P
Sbjct: 466 TLNELYGYKLS----NSIKTGIRLSFSKNP 491
>gi|384247265|gb|EIE20752.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 129
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFV 185
LPP+ + L+V LP + S E+ IF F G +++RL SKE+R +V +
Sbjct: 10 LPPEVNRVLYVRNLPFNISSEEMYDIFGKFGGVRQIRLGTSKETRGT-------AYVVYE 62
Query: 186 SPAHAATAMDALQGY 200
A TA+D L G+
Sbjct: 63 DIYDAKTAVDHLSGF 77
>gi|169771029|ref|XP_001819984.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
oryzae RIB40]
gi|83767843|dbj|BAE57982.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 825
Score = 43.1 bits (100), Expect = 0.095, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVSPAHAA 191
TLFV+ L D + +F+P G+ R+ +K + + PG + FVDF + A
Sbjct: 599 TLFVKNLNFDTTNARFVEVFQPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRTKDQAQ 658
Query: 192 TAMDALQGYRFDEH 205
A+ A+ GY+ D+H
Sbjct: 659 AALAAMNGYKLDQH 672
>gi|115388597|ref|XP_001211804.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
terreus NIH2624]
gi|114195888|gb|EAU37588.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
terreus NIH2624]
Length = 812
Score = 43.1 bits (100), Expect = 0.095, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Query: 90 PSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREV 149
P +PV +P+ + G A D A LG ++TLFV+ L + +
Sbjct: 553 PQKPVVEPKAISQGFSTAETFAADEAEELG-----------PTATLFVKNLNFNTTNERF 601
Query: 150 AHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVSPAHAATAMDALQGYRFDEHD 206
+FRP G+ +L +K + + PG + FVDF + A A A+ A+ GY+ D+H+
Sbjct: 602 VDVFRPLDGFVSAKLKTKPDPKRPGQTLSMGFGFVDFRTKAQAQAALAAMNGYKLDQHE 660
>gi|189234175|ref|XP_968800.2| PREDICTED: similar to RE20544p [Tribolium castaneum]
Length = 187
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA-AT 192
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 27 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFNTRAGAEAA 84
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
D QG RFD ++ RL+FA+
Sbjct: 85 KQDLQQGVRFDPDMPQTI--RLEFAK 108
>gi|313232389|emb|CBY24056.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 43.1 bits (100), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV-SKESRHPGGDPLILCFVDFVSPAH 189
+++ +FV+ LP + + + +F F + EVR+ SK R F+++ +
Sbjct: 240 SNNIIFVQDLPEEVDEKMLTALFNQFDNFMEVRMAPSKTGRA--------AFIEYTNERS 291
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFAR 218
AA A D LQG++ + +L++ FA+
Sbjct: 292 AANAKDTLQGFKVT----PTTQLKITFAK 316
>gi|413934629|gb|AFW69180.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 208
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 122 RSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
R+E LP D TLF+ GLP+D REV ++FR F GY VS R G
Sbjct: 46 RAEQALPARDEVRTLFIAGLPADAKPREVYNLFRDFPGY-----VSSHLR-TGKSSQAYA 99
Query: 181 FVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
F F A A+ A G FD S+ + L
Sbjct: 100 FAVFADQQSALAALSATNGMVFDLEKNCSLHVDL 133
>gi|254580201|ref|XP_002496086.1| ZYRO0C10164p [Zygosaccharomyces rouxii]
gi|238938977|emb|CAR27153.1| ZYRO0C10164p [Zygosaccharomyces rouxii]
Length = 745
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + +E+ +F G++ + +K S G P +CFV+F + A
Sbjct: 617 NTLYVGNLPPDATEQELRQLFSGQQGFRRLSFRNKNSNGNGHGP--MCFVEFEDVSFATR 674
Query: 193 AMDALQGYRFDEHD-RDSVKLRLQFARYP-GARSGGGHRG 230
A+ L G + + +RL F++ P G R RG
Sbjct: 675 ALAELYGSQLPRASASNKGGIRLSFSKNPLGVRGPNNRRG 714
>gi|1050840|emb|CAA90282.1| U1snRNP-specific protein, U1A [Solanum tuberosum]
Length = 253
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+S LFV+ LP + + +F + G+KEVR++ + PG + F+++ +
Sbjct: 178 NSILFVQNLPHQSTPMMLQMLFCQYPGFKEVRMIEAK---PG-----IAFIEYGDEMQST 229
Query: 192 TAMDALQGYRFDEHD 206
AM ALQG++ +
Sbjct: 230 VAMQALQGFKITAEN 244
>gi|198434778|ref|XP_002132163.1| PREDICTED: similar to GH24608 isoform 1 [Ciona intestinalis]
Length = 216
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + +F F G+KEVRLV RH + FV+F
Sbjct: 139 PPN--HILFLNNLPPETQEEMLNMLFNRFNGFKEVRLVP--GRHD------IAFVEFEGE 188
Query: 188 AHAATAMDALQGYR 201
A+ A ALQG++
Sbjct: 189 QQASEAKGALQGFK 202
>gi|429327511|gb|AFZ79271.1| U1/2 small nuclear ribonucleoprotein, putative [Babesia equi]
Length = 207
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 17/95 (17%)
Query: 128 PPDASS----TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVD 183
P +ASS TLFVE +P D ++ V +F + G+K R + E R + F+D
Sbjct: 126 PAEASSKESHTLFVENIPPDINKDGVELLFNQYPGFKGCRFI--EGR-------CVAFID 176
Query: 184 FVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
F + A A+ LQG+R + L + FA+
Sbjct: 177 FALVSQAEAALQGLQGFRMSHNH----ALHISFAK 207
>gi|198455332|ref|XP_001359948.2| GA16117 [Drosophila pseudoobscura pseudoobscura]
gi|198133199|gb|EAL29100.2| GA16117 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESRHPGGDPLILCFVDFVSPAHA- 190
TLFV GLP D RE+ +FR + GY+ +++ SK + P + FV F + A A
Sbjct: 528 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGK--TASP--VGFVTFHTRAGAE 583
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A D QG RFD ++ RL+FA+
Sbjct: 584 AAKQDLQQGVRFDPDMPQTI--RLEFAK 609
>gi|357134589|ref|XP_003568899.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Brachypodium
distachyon]
Length = 251
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
GG + +P ++ LFV+ LP D + + +F + G+KE R++ + PG
Sbjct: 163 GGPKVMMPEIIVPNNILFVQNLPHDTTPMMLQMLFCQYQGFKEARMIEAK---PG----- 214
Query: 179 LCFVDFVSPAHAATAMDALQGYRFDEHD 206
+ FV++ A AM ALQ ++ + +
Sbjct: 215 IAFVEYGDEGQATAAMSALQNFKISKDN 242
>gi|367005765|ref|XP_003687614.1| hypothetical protein TPHA_0K00460 [Tetrapisispora phaffii CBS 4417]
gi|357525919|emb|CCE65180.1| hypothetical protein TPHA_0K00460 [Tetrapisispora phaffii CBS 4417]
Length = 409
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
+++ LFV P D E+ IF PF KEV++++ FV+F A
Sbjct: 110 STTRLFVRPFPLDVQESELNEIFTPFGAMKEVKILNG-----------FAFVEFEEADSA 158
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARY 219
A A++ + G F E + V R+ RY
Sbjct: 159 ARAIEEVNGKTFAEQPLEVVFSRIIPKRY 187
>gi|427782383|gb|JAA56643.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 326
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L K ++ G + FV F S A A A
Sbjct: 29 TLFVSGLPMDAKPRELYLLFRAYKGYEGSLL--KVTQKNGKTSSPVGFVTFSSRAGAEAA 86
Query: 194 MDAL-QGYRFDEHDRDSVKLRLQFAR 218
L QG RFD ++ RL+FA+
Sbjct: 87 KQELQQGVRFDPDLPQTI--RLEFAK 110
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S +E+ +F F G+ +R+ +K GG P+ FV++ A
Sbjct: 241 STLFVANLGQFVSEQELKDLFGSFPGFCRLRMHNK-----GGAPV--AFVEYQDVRLATH 293
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
AM+ALQG DR V R++FA+
Sbjct: 294 AMNALQGCVLFSSDRGGV--RIEFAK 317
>gi|320580822|gb|EFW95044.1| hypothetical protein HPODL_3416 [Ogataea parapolymorpha DL-1]
Length = 602
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE------SRHPGGDPLILCFVDFVS 186
+TL+V LP D + E+ +F+P G++ + +K+ S H G +CFV+F
Sbjct: 449 NTLYVGNLPPDATELELRTLFQPQKGFRRLSFRTKQNTGNGSSSHHGP----MCFVEFED 504
Query: 187 PAHAATAMDALQGYRFDEHDRDSVK----LRLQFARYP-GARSGGGHR 229
A+A A+ L G + + +RL F++ P G R G +R
Sbjct: 505 VAYATRALAELYGRTLPRANGSTSNNKGGIRLSFSKNPLGVRGPGQNR 552
>gi|363739959|ref|XP_415181.3| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Gallus gallus]
Length = 915
Score = 42.7 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + A A+ A+
Sbjct: 755 LFISGLPFSCTKEELEDICKAHGNVKDIRLVTNRAGKPKG----LAYVEYENEAQASQAV 810
Query: 195 DALQGYRFDEH 205
+ G EH
Sbjct: 811 LKMDGLTIKEH 821
>gi|302769730|ref|XP_002968284.1| hypothetical protein SELMODRAFT_409510 [Selaginella moellendorffii]
gi|302788648|ref|XP_002976093.1| hypothetical protein SELMODRAFT_175284 [Selaginella moellendorffii]
gi|300156369|gb|EFJ22998.1| hypothetical protein SELMODRAFT_175284 [Selaginella moellendorffii]
gi|300163928|gb|EFJ30538.1| hypothetical protein SELMODRAFT_409510 [Selaginella moellendorffii]
Length = 235
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 124 EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVD 183
E+ LP ++ LFV+ LP D S ++ +F G+KEVR+V + PG + FV+
Sbjct: 156 EIALP---NNILFVQKLPHDTSSAQLQMLFSSIPGFKEVRMVDAK---PG-----IAFVE 204
Query: 184 FVSPAHAATAMDALQGYRFDE 204
+ A+ A +R +E
Sbjct: 205 YAEVDQASVAKSTFHAFRVNE 225
>gi|198434776|ref|XP_002132167.1| PREDICTED: similar to GH24608 isoform 2 [Ciona intestinalis]
Length = 220
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + +F F G+KEVRLV RH + FV+F
Sbjct: 143 PPN--HILFLNNLPPETQEEMLNMLFNRFNGFKEVRLVP--GRHD------IAFVEFEGE 192
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A+ A ALQG++ + +++ FA+
Sbjct: 193 QQASEAKGALQGFKISPSN----AMKVTFAK 219
>gi|219363207|ref|NP_001136951.1| uncharacterized protein LOC100217110 [Zea mays]
gi|194697740|gb|ACF82954.1| unknown [Zea mays]
Length = 303
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ ++F + L + G + FV F + A +A
Sbjct: 36 TLFVAGLPDDVKPREIHNLFSHRPAFDHCLL-----EYTGRGNQAVAFVTFFTHEAALSA 90
Query: 194 MDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
M +L G FD D +L ++ A+ R GG G R
Sbjct: 91 MSSLNGTIFDPESGD--RLHIELAKSTSRRPRGGVEGYR 127
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G +S +PP ST+F+ L C+ E+ + G+ +++ R GG P+
Sbjct: 209 GRDKSSSDIPP--CSTIFIANLGHTCTEDELKEVLSKEPGFHVLKM-----RRRGGMPV- 260
Query: 179 LCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
F DF + AM+ LQG D D L +++AR
Sbjct: 261 -AFADFTDIESSTAAMNRLQGTVLASSDNDG--LHIEYAR 297
>gi|255572977|ref|XP_002527419.1| RNA binding protein, putative [Ricinus communis]
gi|223533229|gb|EEF34985.1| RNA binding protein, putative [Ricinus communis]
Length = 206
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLF+ L +C+ E+ H + G+ +++ R GG P + F DF A
Sbjct: 124 STLFIANLGPNCTEDELRHTLSQYPGFNVLKM-----RAKGGMP--VAFADFEEIEQAIK 176
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
AM+ LQG DR + +++AR
Sbjct: 177 AMEDLQGTLLPSSDRGG--MHIEYAR 200
>gi|396465284|ref|XP_003837250.1| hypothetical protein LEMA_P034840.1 [Leptosphaeria maculans JN3]
gi|312213808|emb|CBX93810.1| hypothetical protein LEMA_P034840.1 [Leptosphaeria maculans JN3]
Length = 184
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ TLF++ +P D + ++F F G+KEVRLVS S + F +F + A
Sbjct: 108 NKTLFLQNIPRDVDEETLTNVFERFEGFKEVRLVSVRS---------VAFAEFENEQFAI 158
Query: 192 TAMDA 196
TA +A
Sbjct: 159 TAKEA 163
>gi|350425556|ref|XP_003494159.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Bombus impatiens]
Length = 914
Score = 42.7 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP ++ ++ IF+ KEVR+V+ + H G L +V+FV A A+
Sbjct: 771 LFVKGLPVSTTKEDLEEIFKVHGSLKEVRIVTYRNGHSKG----LAYVEFVDENSAGKAL 826
Query: 195 DALQGYRFDE 204
A+ G + +
Sbjct: 827 LAIDGMKIGD 836
>gi|307102554|gb|EFN50825.1| hypothetical protein CHLNCDRAFT_28661 [Chlorella variabilis]
Length = 219
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LFVE LP+ + + +F+ F G KEV V + PG + F++F + A
Sbjct: 145 NAKLFVENLPAATTAAMLEMLFQQFPGCKEVTTVPAK---PG-----IAFIEFETEMQAT 196
Query: 192 TAMDALQGYRFDEHDRDSV 210
AM LQG++ + ++
Sbjct: 197 VAMTGLQGFKVTPQNSMTI 215
>gi|50285445|ref|XP_445151.1| hypothetical protein [Candida glabrata CBS 138]
gi|74691154|sp|Q6FXP4.1|MRD1_CANGA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49524454|emb|CAG58051.1| unnamed protein product [Candida glabrata]
Length = 861
Score = 42.7 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+ V+ LP + +R++V +F F K VR+ K + G FV+FV P A AM
Sbjct: 740 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFVLPKEAENAM 795
Query: 195 DALQG 199
D LQG
Sbjct: 796 DQLQG 800
>gi|363754827|ref|XP_003647629.1| hypothetical protein Ecym_6441 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891266|gb|AET40812.1| hypothetical protein Ecym_6441 [Eremothecium cymbalariae
DBVPG#7215]
Length = 689
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 108 GPSAKDRALGLGGGRSEVPL------PPDAS--------STLFVEGLPSDCSRREVAHIF 153
GP AL G S+V L PP A+ +TL+V LP D + +E+ +F
Sbjct: 528 GPRNAAAALQNTNGISQVDLSLLAKVPPPANPADQNPPCNTLYVGNLPPDATEQELRQLF 587
Query: 154 RPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHD---RDSV 210
G++ + +K + G P +CFV+F AHA A+ L G + +
Sbjct: 588 SSQKGFRRLSFRNKNNNGNGHGP--MCFVEFEDVAHATRALAELYGSQLSRTNGSHNSKG 645
Query: 211 KLRLQFARYP-GARSGGGHRG 230
+RL F++ P G R RG
Sbjct: 646 GIRLSFSKNPLGVRGPNSRRG 666
>gi|401623965|gb|EJS42043.1| whi3p [Saccharomyces arboricola H-6]
Length = 664
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 541 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 600
Query: 193 AMDALQGYRFDEHDRDSVK----LRLQFARYP-GARSGGGHRG 230
A+ L G + R +V +RL F++ P G R RG
Sbjct: 601 ALAELYGRQL---PRSTVSSKGGIRLSFSKNPLGVRGPNSRRG 640
>gi|452984744|gb|EME84501.1| hypothetical protein MYCFIDRAFT_182368 [Pseudocercospora fijiensis
CIRAD86]
Length = 479
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 286 NTLYVGNLPIDTSEDELKSLFSKQRGYKRLCFRTKQNGP-------MCFVEFEDISFATK 338
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARS----GGG 227
A+ L G+ H+ +RL F++ P G RS GGG
Sbjct: 339 ALHELYGHPL--HNSVKGGIRLSFSKNPLGVRSNQMNGGG 376
>gi|405123760|gb|AFR98523.1| RNA binding protein [Cryptococcus neoformans var. grubii H99]
Length = 284
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 18/111 (16%)
Query: 108 GPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
GP+AK + L + LPP+ S LFV+ LP + ++ +F G E+R +
Sbjct: 191 GPAAKKQRLQMPDEY----LPPN--SVLFVQNLPDGTTSEDLREVFEVHPGLIEIRTIPA 244
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ + FV+F A A DAL ++ D K+++ +AR
Sbjct: 245 KKD--------IAFVEFADEGAATIAKDALHNFKID----GETKMKVTYAR 283
>gi|449476847|ref|XP_002193793.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Taeniopygia guttata]
Length = 928
Score = 42.7 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ GLP C++ E+ + + K++RLV+ + P G L +V++ S A A+ A+
Sbjct: 768 LFISGLPFSCTKEELEEVCKAHGNVKDIRLVTNRAGKPKG----LAYVEYESEAQASQAV 823
Query: 195 DALQGYRFDEH 205
+ G +H
Sbjct: 824 LKMDGLTMKDH 834
>gi|116193039|ref|XP_001222332.1| hypothetical protein CHGG_06237 [Chaetomium globosum CBS 148.51]
gi|88182150|gb|EAQ89618.1| hypothetical protein CHGG_06237 [Chaetomium globosum CBS 148.51]
Length = 650
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A
Sbjct: 465 NTLYVGNLPLDTSEEELKALFSRQRGYKRLCFRTKQNGP-------MCFVEFEDVTFATK 517
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A+ L G H+ +RL F++ P G RSG
Sbjct: 518 ALHDLYGQLL--HNSVKGGIRLSFSKNPLGVRSG 549
>gi|340728933|ref|XP_003402766.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Bombus terrestris]
Length = 914
Score = 42.7 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP ++ ++ IF+ KEVR+V+ + H G L +V+FV A A+
Sbjct: 771 LFVKGLPVTTTKEDLEEIFKVHGSLKEVRIVTYRNGHSKG----LAYVEFVDENSAGKAL 826
Query: 195 DALQGYRFDE 204
A+ G + +
Sbjct: 827 LAIDGMKIGD 836
>gi|302673457|ref|XP_003026415.1| hypothetical protein SCHCODRAFT_35516 [Schizophyllum commune H4-8]
gi|300100097|gb|EFI91512.1| hypothetical protein SCHCODRAFT_35516, partial [Schizophyllum
commune H4-8]
Length = 230
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP S+ ++ +F + EVR+V + + FV++
Sbjct: 157 LPPN--KILFLQNLPETVSKDQLTALFSQYPNLHEVRMVPTKKD--------IAFVEYYD 206
Query: 187 PAHAATAMDALQGYRFDEHDRDSV 210
A A A DAL Y+ D ++ V
Sbjct: 207 EASATNAKDALHNYKMDGENKIKV 230
>gi|85109011|ref|XP_962704.1| hypothetical protein NCU08034 [Neurospora crassa OR74A]
gi|28924315|gb|EAA33468.1| hypothetical protein NCU08034 [Neurospora crassa OR74A]
gi|39979161|emb|CAE85534.1| related to small nuclear ribonucleoprotein snRNP U1A [Neurospora
crassa]
Length = 247
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 26/121 (21%)
Query: 83 RHMSGGMP-SRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVP---LPPDASSTLFVE 138
R + G P +RP + R G+ GP+A VP LPP+ LFV+
Sbjct: 132 RPLQGAAPDARPAKNQRGAGLKATGQGPAAV------------VPDEYLPPN--RILFVQ 177
Query: 139 GLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQ 198
LP D ++ ++ IF F G++EVR V PG + FV++ + A A TA +
Sbjct: 178 NLPDDFTKDDLTTIFSRFDGFREVRTV------PGRSG--IAFVEYDAEAGAITAKENTA 229
Query: 199 G 199
G
Sbjct: 230 G 230
>gi|365982081|ref|XP_003667874.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
gi|343766640|emb|CCD22631.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
Length = 843
Score = 42.7 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S+ + V+ LP + +R++V +F F K VR+ K + G F++F+ P A
Sbjct: 742 SAKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFIEFLLPKEAE 797
Query: 192 TAMDALQG 199
AMD LQG
Sbjct: 798 NAMDQLQG 805
>gi|25012435|gb|AAN71324.1| RE20544p [Drosophila melanogaster]
Length = 194
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA-AT 192
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 30 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFHTRAGAEAA 87
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
D QG RFD ++ RL+FA+
Sbjct: 88 KQDLQQGVRFDPDMPQTI--RLEFAK 111
>gi|148909446|gb|ABR17821.1| unknown [Picea sitchensis]
Length = 302
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLF+ GLP D RE+ ++FR G++ +L ++ G I+ F F A A
Sbjct: 37 TLFISGLPEDIKHREIYNLFRRRPGFEACQL-----KYTGRGYQIVAFAVFSHHQLALAA 91
Query: 194 MDALQGYRFDEHDRDSVKLRLQFARYPGARSG 225
D L G FD ++ + L RSG
Sbjct: 92 KDVLNGLTFDPETGATLNIELARTNSRIKRSG 123
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV L C+ E+ + F G+K ++L +K GG P + FVDF +A A
Sbjct: 199 TLFVANLGPTCTEGELREVLSRFQGFKMLKLQTK-----GGMP--VAFVDFEDVTSSAEA 251
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
+ LQ DR L L++A+
Sbjct: 252 LKQLQDTLLPSSDRGG--LHLEYAK 274
>gi|344250483|gb|EGW06587.1| U1 small nuclear ribonucleoprotein A [Cricetulus griseus]
Length = 104
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + ++ ++ +F G+KEV LV PG + FV+F +
Sbjct: 27 PPN--HILFLTNLPEETNKLMLSMLFNQCPGFKEVHLV------PGQHDI--AFVEFDNE 76
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DALQG++ +++ +++ FA+
Sbjct: 77 VQAGAAPDALQGFKITQNN----AMKISFAK 103
>gi|323303359|gb|EGA57155.1| Whi3p [Saccharomyces cerevisiae FostersB]
Length = 661
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGYRFDEHDRDSVK----LRLQFARYP-GARSGGGHRG 230
A+ L G + R +V +RL F++ P G R RG
Sbjct: 598 ALAELYGRQL---PRSTVSSKGGIRLSFSKNPLGVRGPNSRRG 637
>gi|349580746|dbj|GAA25905.1| K7_Whi3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 661
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGYRFDEHDRDSVK----LRLQFARYP-GARSGGGHRG 230
A+ L G + R +V +RL F++ P G R RG
Sbjct: 598 ALAELYGRQL---PRSTVSSKGGIRLSFSKNPLGVRGPNSRRG 637
>gi|326532978|dbj|BAJ89334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 122 RSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
R+E PP D TLF+ GLP+D REV ++FR F GY + S +S
Sbjct: 56 RAEPLAPPRDELRTLFIAGLPADVKPREVYNLFRDFPGYVSSHVRSGKSAQ------SYA 109
Query: 181 FVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
F F A A+ A G FD S+ + L
Sbjct: 110 FAVFGDQPSALAAVSATNGLVFDLEKNCSIHVDL 143
>gi|313238053|emb|CBY13172.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++T++VE LP + + + +F F G+K+ R + P G FV+F P A
Sbjct: 129 AATIYVENLPDEANESMLNLLFSQFPGFKKSRPI------PAGGK---AFVEFADPGAAT 179
Query: 192 TAMDALQGYR 201
+A DALQG++
Sbjct: 180 SAKDALQGFK 189
>gi|156120369|ref|NP_001095330.1| squamous cell carcinoma antigen recognized by T-cells 3 [Bos
taurus]
gi|154425531|gb|AAI51266.1| SART3 protein [Bos taurus]
Length = 957
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV GLP C++ E+ I R K++RLV+ + P G L +V++ + + A+ A+
Sbjct: 803 LFVSGLPFSCTKEELEEICRAHGTVKDIRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 195 DALQGYRFDEH 205
+ G E+
Sbjct: 859 LKMDGMTIREN 869
>gi|449297722|gb|EMC93739.1| hypothetical protein BAUCODRAFT_48247, partial [Baudoinia
compniacensis UAMH 10762]
Length = 444
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP + S E+ IF GYK + +K++ +CFV+F A
Sbjct: 306 NTLYVGNLPINTSEDELKAIFSRQRGYKRLCFRTKQNGP-------MCFVEFEDVGFATR 358
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSG 225
A++ L G+ +SVK +RL F++ P G R+G
Sbjct: 359 ALNDLYGFVLS----NSVKGGIRLSFSKNPLGVRTG 390
>gi|391337372|ref|XP_003743043.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Metaseiulus occidentalis]
Length = 212
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+A LF+ GLP + + + +F F G+KEVRL+ G P I FV++
Sbjct: 135 PPNA--ILFLTGLPEETNDMMLQMLFGQFPGFKEVRLIP-------GRPDI-AFVEYEDE 184
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A + A + LQG++ + +R+ FA+
Sbjct: 185 AQSTAAKNGLQGFKVT----PTAPIRITFAK 211
>gi|308499132|ref|XP_003111752.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
gi|308239661|gb|EFO83613.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
Length = 317
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+ + ST++V LP D +EV +F Y ++R V ++RH G+ FV F S
Sbjct: 1 MSSSSESTIYVGNLPPDVREKEVEDLFHK---YGDIRNVEVKTRH--GETHSFAFVQFDS 55
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQF 216
A A+ + GY F D +LR++F
Sbjct: 56 HRDAKEAVRSRDGYDF-----DGKRLRVEF 80
>gi|442619723|ref|NP_001014631.3| couch potato, isoform T [Drosophila melanogaster]
gi|442619727|ref|NP_001163640.2| couch potato, isoform V [Drosophila melanogaster]
gi|440217576|gb|AAX52961.3| couch potato, isoform T [Drosophila melanogaster]
gi|440217578|gb|ACZ94936.2| couch potato, isoform V [Drosophila melanogaster]
Length = 607
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESRHPGGDPLILCFVDFVSPAHA- 190
TLFV GLP D RE+ +FR + GY+ +++ SK + P + FV F + A A
Sbjct: 443 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGK--TASP--VGFVTFHTRAGAE 498
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A D QG RFD ++ RL+FA+
Sbjct: 499 AAKQDLQQGVRFDPDMPQTI--RLEFAK 524
>gi|350597108|ref|XP_003362224.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Sus scrofa]
Length = 262
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ GLP C+R E+ I + K++RLV+ + P G L +V++ + + A+ A+
Sbjct: 102 LFISGLPFSCTREELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYENESQASQAV 157
Query: 195 DALQGYRFDEHDRDSVKLRL------QFARYPGARSGGG 227
+ G E + +K+ + +F P AR G
Sbjct: 158 LKMDGMTVKE---NIIKVAISNPPQRKFPEKPEARKAPG 193
>gi|256270770|gb|EEU05931.1| Whi3p [Saccharomyces cerevisiae JAY291]
Length = 661
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGYRFDEHDRDSVK----LRLQFARYP-GARSGGGHRG 230
A+ L G + R +V +RL F++ P G R RG
Sbjct: 598 ALAELYGRQL---PRSTVSSKGGIRLSFSKNPLGVRGPNSRRG 637
>gi|367001456|ref|XP_003685463.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
gi|357523761|emb|CCE63029.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
Length = 872
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 24/118 (20%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 745 SGKIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 800
Query: 192 TAMDALQGYRF------------------DEHDRDSVKLRLQFA--RYPGARSGGGHR 229
AMD LQG +E R + K R Q A Y +S GG +
Sbjct: 801 NAMDQLQGVHLLGRRLVIQYAQAEAVDAEEEISRMTKKARKQMATREYGSLKSSGGRK 858
>gi|207341833|gb|EDZ69780.1| YNL197Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 661
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGYRFDEHDRDSVK----LRLQFARYP-GARSGGGHRG 230
A+ L G + R +V +RL F++ P G R RG
Sbjct: 598 ALAELYGRQL---PRSTVSSKGGIRLSFSKNPLGVRGPNSRRG 637
>gi|365758778|gb|EHN00605.1| Whi3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 664
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 541 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 600
Query: 193 AMDALQGYRFDEHDRDSVK----LRLQFARYP-GARSGGGHRG 230
A+ L G + R +V +RL F++ P G R RG
Sbjct: 601 ALAELYGRQL---PRSTVSSKGGIRLSFSKNPLGVRGPNSRRG 640
>gi|6324132|ref|NP_014202.1| Whi3p [Saccharomyces cerevisiae S288c]
gi|465481|sp|P34761.1|WHI3_YEAST RecName: Full=Protein WHI3
gi|393077|gb|AAA03320.1| Whi3p [Saccharomyces cerevisiae]
gi|600068|emb|CAA55511.1| N1382 [Saccharomyces cerevisiae]
gi|1302195|emb|CAA96092.1| WHI3 [Saccharomyces cerevisiae]
gi|285814462|tpg|DAA10356.1| TPA: Whi3p [Saccharomyces cerevisiae S288c]
gi|392296797|gb|EIW07898.1| Whi3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 661
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGYRFDEHDRDSVK----LRLQFARYP-GARSGGGHRG 230
A+ L G + R +V +RL F++ P G R RG
Sbjct: 598 ALAELYGRQL---PRSTVSSKGGIRLSFSKNPLGVRGPNSRRG 637
>gi|221054978|ref|XP_002258628.1| Small nuclear ribonucleoprotein (SnRNP) [Plasmodium knowlesi strain
H]
gi|193808697|emb|CAQ39400.1| Small nuclear ribonucleoprotein (SnRNP),putative [Plasmodium
knowlesi strain H]
Length = 192
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV+ LP++ ++ + +F + G+ EVR + PG + + FVDF S + A
Sbjct: 121 TLFVQNLPNEINKNALEILFNQYPGFCEVRHI------PGRN---VAFVDFSSYQNGEVA 171
Query: 194 MDALQGYR 201
M+ LQ ++
Sbjct: 172 MNGLQNFK 179
>gi|195107387|ref|XP_001998295.1| GI23706 [Drosophila mojavensis]
gi|193914889|gb|EDW13756.1| GI23706 [Drosophila mojavensis]
Length = 609
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESRHPGGDPLILCFVDFVSPAHA- 190
TLFV GLP D RE+ +FR + GY+ +++ SK + P + FV F + A A
Sbjct: 445 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGK--TASP--VGFVTFHTRAGAE 500
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A D QG RFD ++ RL+FA+
Sbjct: 501 AAKQDLQQGVRFDPDMPQTI--RLEFAK 526
>gi|321172607|gb|ADW77182.1| couch potato [Culex pipiens]
Length = 252
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA-AT 192
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + + A A
Sbjct: 88 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFSTRSGAEAA 145
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
D QG RFD ++ RL+FA+
Sbjct: 146 KQDLQQGVRFDPDMPQTI--RLEFAK 169
>gi|308800402|ref|XP_003074982.1| U2snrB small nuclear ribonucleoprotein U2B, putative (IC)
[Ostreococcus tauri]
gi|119358847|emb|CAL52253.2| U2snrB small nuclear ribonucleoprotein U2B, putative (IC)
[Ostreococcus tauri]
Length = 221
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+ V+GLP+ + + +F+ F+G+K + +KE + + V+F +PA A+ A+
Sbjct: 151 ILVQGLPAATTTHMLTLLFQQFLGFKSANMSAKE--------IGIGQVEFDTPAQASAAL 202
Query: 195 DALQGYRFD 203
+ LQG+R +
Sbjct: 203 NGLQGFRLN 211
>gi|258570691|ref|XP_002544149.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904419|gb|EEP78820.1| predicted protein [Uncinocarpus reesii 1704]
Length = 603
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK R++ ++ P G +CFV+F + A
Sbjct: 392 NTLYVGNLPPDTSEDELKALFSKQRGYK--RMIFRQ--KPNGP---ICFVEFDDISWATK 444
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP 220
++ L GY +S+K +RL F++ P
Sbjct: 445 SLKELYGYELS----NSIKGGIRLSFSKNP 470
>gi|151944344|gb|EDN62622.1| whiskey [Saccharomyces cerevisiae YJM789]
Length = 661
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGYRFDEHDRDSVK----LRLQFARYP-GARSGGGHRG 230
A+ L G + R +V +RL F++ P G R RG
Sbjct: 598 ALAELYGRQL---PRSTVSSKGGIRLSFSKNPLGVRGPNSRRG 637
>gi|448106273|ref|XP_004200705.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|448109390|ref|XP_004201336.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|359382127|emb|CCE80964.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|359382892|emb|CCE80199.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
Length = 496
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 69 RSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLP 128
S+Q +S S QS D P+I G + P AK++ + + VP P
Sbjct: 303 NSSQTNSQSASQS-------------DTPQISPASGQN-TPIAKNKDVPDLSLLARVPPP 348
Query: 129 PDAS------STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI---- 178
+ + +TL+V LP D + +E+ +F P G++ + +K S
Sbjct: 349 ANPADQNPPCNTLYVGNLPPDATEQELRALFSPQKGFRRLSFRTKNSSSSNSGHSGSHNH 408
Query: 179 --LCFVDFVSPAHAATAMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSGGGHR 229
+CFV+F AHA A+ L G + K +RL F++ P G R G R
Sbjct: 409 GPMCFVEFEDVAHATRALAELYGRTLPRPGGSNGKGGIRLSFSKNPLGVRGPGNPR 464
>gi|2829909|gb|AAC00617.1| Hypothetical protein [Arabidopsis thaliana]
Length = 214
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 28/93 (30%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYD--VPSGHELSS------------------ 40
MADGYW + ++ Q P KRPR+D+D PS E+++
Sbjct: 1 MADGYW---NQQRQQHHPPGGPMKRPRSDFDSYAPSLLEINNACRLVEAPSSTMTIGHGG 57
Query: 41 -YYTRDDDRGALRGMRDTDSLGASYDRYLRSAQ 72
YY RD+D + DT ++G++YDRYL+S Q
Sbjct: 58 GYYPRDEDLD----VPDTRTIGSAYDRYLQSVQ 86
>gi|195996479|ref|XP_002108108.1| hypothetical protein TRIADDRAFT_52243 [Trichoplax adhaerens]
gi|190588884|gb|EDV28906.1| hypothetical protein TRIADDRAFT_52243 [Trichoplax adhaerens]
Length = 298
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPG----GDPLILCFVDFVSPAH 189
TLFV GLP D +R++ +FR GY + ++ ++ PG P + F F +
Sbjct: 17 TLFVSGLPVDVKQRDLHLLFRGLPGYLD-SILKTSTKQPGHGNKSGP--VAFATFETREL 73
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A LQG++FD DS LR+ FA+
Sbjct: 74 ANEAKAILQGFQFDPDVTDS-HLRVDFAK 101
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
P STLFV L + + +E+ IF VG++ +R+ K PG F++F +
Sbjct: 202 PQVCSTLFVANLGRNITDKELRDIFGRCVGFRRLRMHKK----PGFP--TTAFIEFANIQ 255
Query: 189 HAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A++ALQG + + R+++AR
Sbjct: 256 FATQALNALQGAIIQSSECGGI--RIEYAR 283
>gi|358340304|dbj|GAA48227.1| U1 small nuclear ribonucleoprotein A [Clonorchis sinensis]
Length = 314
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP D ++ +F F GY+EVR+V RH + FV+F +
Sbjct: 237 PPN--KILFLTNLPEDSDEAMLSMLFNQFSGYREVRMVP--GRHD------IAFVEFGNE 286
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A LQG+ R +R+ FA+
Sbjct: 287 IEAGAAKHGLQGFNI----RPGRPIRITFAK 313
>gi|384498171|gb|EIE88662.1| hypothetical protein RO3G_13373 [Rhizopus delemar RA 99-880]
Length = 464
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + E+ +F GYK + R+ P +CFV+F AA
Sbjct: 380 NTLYVGNLPPDANEEELKSMFSKCAGYKRLSF-----RNKSNGP--MCFVEFEDAIFAAQ 432
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYPGAR 223
A+ L G +SVK +RL F++ P +
Sbjct: 433 ALQDLHGNPLS----NSVKGGIRLSFSKNPLVK 461
>gi|123407390|ref|XP_001303000.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121884341|gb|EAX90070.1| hypothetical protein TVAG_371310 [Trichomonas vaginalis G3]
Length = 262
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPG-GDPLILCFVDFVSPA 188
+A++TLFV GLP + + +E+ + F PF K V LV R P + CFV++ + A
Sbjct: 96 NANNTLFVSGLPKEVTEQEIVYEFNPFGRVKTVNLV----RDPKTNEQRSYCFVEYETEA 151
Query: 189 HAATAMD 195
A++
Sbjct: 152 GFRNALN 158
>gi|408388147|gb|EKJ67837.1| hypothetical protein FPSE_11985 [Fusarium pseudograminearum CS3096]
Length = 571
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 388 NTLYVGNLPGDASEEELKTLFSNARGYKRLCFRTKQNG-------PMCFVEFDDVSCATK 440
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A+ G H+ +RL F++ P G RSG
Sbjct: 441 ALSDFYGTPL--HNSTKGGIRLSFSKNPLGVRSG 472
>gi|400600735|gb|EJP68403.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 933
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A
Sbjct: 743 NTLYVGNLPIDTSEEELKAVFCKQRGYKRLCFRTKQNG-------PMCFVEFEDITFATK 795
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A+ L G H+ +RL F++ P G RSG
Sbjct: 796 ALHDLYGTPL--HNSTKGGIRLSFSKNPLGVRSG 827
>gi|21615411|emb|CAD33925.1| proline rich protein 3 [Cicer arietinum]
Length = 284
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T+F+ GLP D RE+ ++ R G++ +L K + G F F SP A A
Sbjct: 6 TIFITGLPEDVKEREIQNLLRWLPGFEASQLNFKAEKPMG-------FALFSSPHQAIAA 58
Query: 194 MDALQGYRFD 203
D LQ FD
Sbjct: 59 KDILQDMLFD 68
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP +TLF+ L + + EV +F G+K+++++ +E RH +CF++F
Sbjct: 177 PP--CNTLFIGNLGENINEEEVRGLFSVQPGFKQMKILRQE-RH------TVCFIEFEDV 227
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFARYP-GARSGGG 227
A LQG SV +R+Q+++ P G R G
Sbjct: 228 NSATNVHHNLQGAVIP--SSGSVGMRIQYSKNPFGKRKDGN 266
>gi|326512082|dbj|BAJ96022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 233
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ + LF++ LP + + +F+ + G++EVR++ + PG + FV++
Sbjct: 156 PPN--NILFLQNLPDQTTSVMLQILFQQYPGFREVRMIEAK---PG-----IAFVEYEDE 205
Query: 188 AHAATAMDALQGYRFDEHD 206
+ AM+ALQG++ +
Sbjct: 206 NQSMVAMEALQGFKISPEN 224
>gi|449456443|ref|XP_004145959.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Cucumis sativus]
Length = 248
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S T++V LPSD E+ +F YK R++ E + P P CFV+F S A
Sbjct: 6 SRTIYVGNLPSDIKEYEIEDLF-----YKYGRILDIELKIPPRPPC-YCFVEFESVRDAE 59
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ A GY F D +LR++ A
Sbjct: 60 DAIRARDGYNF-----DGCRLRVELA 80
>gi|256083949|ref|XP_002578197.1| small nuclear ribonucleoprotein U)1aU)2b [Schistosoma mansoni]
gi|353232716|emb|CCD80071.1| putative small nuclear ribonucleoprotein U)1a,U)2b [Schistosoma
mansoni]
Length = 328
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP D ++ +F F GY+EVR+V RH + FV+F +
Sbjct: 251 PPN--KILFLTNLPDDSDEAMLSMLFGQFTGYREVRMVP--GRHD------IAFVEFGNE 300
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A+ A LQG+ R +R+ FA+
Sbjct: 301 VEASAAKLGLQGFNI----RPGQAIRITFAK 327
>gi|156845900|ref|XP_001645839.1| hypothetical protein Kpol_1054p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156116508|gb|EDO17981.1| hypothetical protein Kpol_1054p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 683
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + E+ +F G++ + +K + G P +CFV+F + A
Sbjct: 562 NTLYVGNLPSDATEHELRQLFSSQPGFRRLSFRNKNTNGNGHGP--ICFVEFEDVSFATR 619
Query: 193 AMDALQGYRFDEHD-RDSVKLRLQFARYP 220
A+ L G + + + +RL F++ P
Sbjct: 620 ALAELYGSQLPSTNVSNKGGIRLSFSKNP 648
>gi|323309712|gb|EGA62920.1| Npl3p [Saccharomyces cerevisiae FostersO]
Length = 419
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
+++ LFV P D E+ IF PF KEV++++ FV+F A
Sbjct: 128 SNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILNG-----------FAFVEFEEAESA 176
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARY 219
A A++ + G F + V +L RY
Sbjct: 177 AKAIEEVHGKSFANQPLEVVYSKLPAKRY 205
>gi|119568196|gb|EAW47811.1| hCG22524, isoform CRA_b [Homo sapiens]
Length = 174
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEV LV RH + FV+F +
Sbjct: 97 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVCLVP--GRHD------IAFVEFEND 146
Query: 188 AHAATAMDALQGYR 201
A A DALQG++
Sbjct: 147 GKAGAARDALQGFK 160
>gi|449522400|ref|XP_004168214.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 106
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S T++V LPSD E+ +F YK R++ E + P P CFV+F S A
Sbjct: 6 SRTIYVGNLPSDIKEYEIEDLF-----YKYGRILDIELKIPPRPPC-YCFVEFESVRDAE 59
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ A GY F D +LR++ A
Sbjct: 60 DAIRARDGYNF-----DGCRLRVELA 80
>gi|443682493|gb|ELT87074.1| hypothetical protein CAPTEDRAFT_222846 [Capitella teleta]
Length = 841
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP R V +IF+ + K+VRLV+ + G L +V+FVS + AA A+
Sbjct: 699 LFVKGLPRTTGRDAVENIFKQYGAIKDVRLVTYRNGVSKG----LAYVEFVSESEAAQAV 754
Query: 195 DALQGYRFDEHD 206
G +H+
Sbjct: 755 MKADGLMVGDHE 766
>gi|326437182|gb|EGD82752.1| hypothetical protein PTSG_03403 [Salpingoeca sp. ATCC 50818]
Length = 1027
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G G + V L AS+T+FV+ L + + ++F+ + R+ +K++ H + L
Sbjct: 792 GQGEAAVELESTASTTVFVKNLNFETGDNALYNLFQTCGTIRSCRVATKKNPHNPQELLS 851
Query: 179 LCF--VDFVSPAHAATAMDALQGYRFDEHDRD-SVKLRLQFARYPGARSGG 226
+ F V+F + A A AM LQG D H + + R Q + P AR G
Sbjct: 852 MGFGFVEFKTHAEAVKAMKKLQGAELDGHKLELKLSTRTQQQQGPVARREG 902
>gi|366992418|ref|XP_003675974.1| hypothetical protein NCAS_0D00290 [Naumovozyma castellii CBS 4309]
gi|342301840|emb|CCC69610.1| hypothetical protein NCAS_0D00290 [Naumovozyma castellii CBS 4309]
Length = 626
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + +E+ +F G++ + +K + G P +CFV+F + A
Sbjct: 516 NTLYVGNLPPDATEQELRQLFSSQEGFRRLSFRNKNTNGHGHGP--MCFVEFEDISFATR 573
Query: 193 AMDALQGYRFDEHDRDSV-KLRLQFARYP-GARSGGGHRG 230
A+ L G + S +RL F++ P G R +G
Sbjct: 574 ALAELYGSQLPRPSLSSKGGIRLSFSKNPLGVRGSNNRKG 613
>gi|303320063|ref|XP_003070031.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109717|gb|EER27886.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 615
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK R++ ++ P G +CFV+F + A
Sbjct: 403 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ--KPNGP---ICFVEFDDISWATK 455
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP 220
++ L GY +S+K +RL F++ P
Sbjct: 456 SLKELYGYELS----NSIKGGIRLSFSKNP 481
>gi|452003034|gb|EMD95491.1| hypothetical protein COCHEDRAFT_1200551 [Cochliobolus
heterostrophus C5]
Length = 244
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ TLF++ +P D ++ IF F G+KEVRLVS + + F +F + A
Sbjct: 168 NKTLFLQNIPRDVDEDDLTSIFERFEGFKEVRLVSVRA---------VAFAEFENEQFAI 218
Query: 192 TAMDA 196
TA +A
Sbjct: 219 TAKEA 223
>gi|320031854|gb|EFW13811.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 615
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK R++ ++ P G +CFV+F + A
Sbjct: 403 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ--KPNGP---ICFVEFDDISWATK 455
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP 220
++ L GY +S+K +RL F++ P
Sbjct: 456 SLKELYGYELS----NSIKGGIRLSFSKNP 481
>gi|50288343|ref|XP_446600.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525908|emb|CAG59527.1| unnamed protein product [Candida glabrata]
Length = 674
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 101 GIGGMDPGPSAKDRALGLGGGRSEVPLPPDAS------STLFVEGLPSDCSRREVAHIFR 154
G+G + G S D +L ++VP P + + +TL+V LP D S +E+ +F
Sbjct: 525 GMGYSEKGMSQADLSL-----LAKVPPPANPADQNPPCNTLYVGNLPPDTSEQELRQLFS 579
Query: 155 PFVGYKEVRLVSKESR-HPGGD-PLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSV-K 211
P G++ + +K + H G P +CFV+F + A A+ L G + +S
Sbjct: 580 PQPGFRRLSFKNKNNNGHTHGHGP--MCFVEFEDVSFATRALAELYGRQLPRTGANSKGG 637
Query: 212 LRLQFARYPGARSGGGHR 229
+RL F++ P G +R
Sbjct: 638 IRLSFSKNPLGVRGPNNR 655
>gi|119183856|ref|XP_001242909.1| hypothetical protein CIMG_06805 [Coccidioides immitis RS]
gi|392865813|gb|EAS31646.2| RNA binding protein [Coccidioides immitis RS]
Length = 615
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK R++ ++ P G +CFV+F + A
Sbjct: 403 NTLYVGNLPPDTSEDELKALFSRQRGYK--RMIFRQ--KPNGP---ICFVEFDDISWATK 455
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP 220
++ L GY +S+K +RL F++ P
Sbjct: 456 SLKELYGYELS----NSIKGGIRLSFSKNP 481
>gi|82914978|ref|XP_728920.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23485600|gb|EAA20485.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 189
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV+ LP + ++ + +F + G+ EVR + PG + + F+DF S + A
Sbjct: 121 TLFVQNLPDEINKNALEILFNQYPGFSEVRYI------PGRN---VAFIDFNSYQNGEVA 171
Query: 194 MDALQGY 200
M+ LQ +
Sbjct: 172 MNGLQSF 178
>gi|440634774|gb|ELR04693.1| hypothetical protein GMDG_01551 [Geomyces destructans 20631-21]
Length = 577
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 380 NTLYVGNLPIDTSEDELKAMFSKQRGYKRLCFRTKQNGP-------MCFVEFEDVSFATK 432
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP-GARS 224
A+ L G+ +SVK +RL F++ P G RS
Sbjct: 433 ALHELYGHPL----HNSVKGGIRLSFSKNPLGVRS 463
>gi|451856476|gb|EMD69767.1| hypothetical protein COCSADRAFT_155918 [Cochliobolus sativus
ND90Pr]
Length = 244
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ TLF++ +P D ++ IF F G+KEVRLVS + + F +F + A
Sbjct: 168 NKTLFLQNIPRDVDEDDLTTIFERFEGFKEVRLVSVRA---------VAFAEFENEQFAI 218
Query: 192 TAMDA 196
TA +A
Sbjct: 219 TAKEA 223
>gi|403213912|emb|CCK68414.1| hypothetical protein KNAG_0A07610 [Kazachstania naganishii CBS
8797]
Length = 867
Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 739 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSTRG----FAFVEFLLPKEAE 794
Query: 192 TAMDALQG 199
AMD LQG
Sbjct: 795 DAMDQLQG 802
>gi|195444819|ref|XP_002070044.1| GK11234 [Drosophila willistoni]
gi|194166129|gb|EDW81030.1| GK11234 [Drosophila willistoni]
Length = 571
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESRHPGGDPLILCFVDFVSPAHA- 190
TLFV GLP D RE+ +FR + GY+ +++ SK + P + FV F + A A
Sbjct: 30 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGK--TASP--VGFVTFHTRAGAE 85
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A D QG RFD ++ RL+FA+
Sbjct: 86 AAKQDLQQGVRFDPDMPQTI--RLEFAK 111
>gi|443713681|gb|ELU06415.1| hypothetical protein CAPTEDRAFT_112394, partial [Capitella teleta]
Length = 347
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS-PAHAAT 192
TLFV GLP D RE+ +FR + GY+ L K + G + FV F S A A
Sbjct: 4 TLFVSGLPMDAKPRELYLLFRAYKGYEGSLL--KVTGKNGKTTSPVGFVTFTSRVAAEAA 61
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
D QG RFD + LRL+FA+
Sbjct: 62 KQDLQQGVRFDPDLPQT--LRLEFAK 85
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
STLFV L CS +E+ +F+ G+ +R+ +K GG P + FV++ A
Sbjct: 219 CSTLFVANLGPFCSEQELKDLFQSISGFLRLRMHNK-----GGSP--VAFVEYQDVRCAM 271
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFAR 218
AM LQG +R + R+++AR
Sbjct: 272 EAMLKLQGCVLFSSERGGI--RIEYAR 296
>gi|154280340|ref|XP_001540983.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412926|gb|EDN08313.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 675
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF- 181
+E PL +STLFV L + + +F+P G+ R+ +K G+ L + F
Sbjct: 438 AETPL---ETSTLFVRNLNFSTTNARLTEVFQPLDGFLSARVKTKADPKRPGETLSMGFG 494
Query: 182 -VDFVSPAHAATAMDALQGYRFDEHD 206
V+F + A A A+ +QGY+ D+H+
Sbjct: 495 FVEFRTAAQARAALATMQGYKLDQHE 520
>gi|195476890|ref|XP_002100023.1| GE16818 [Drosophila yakuba]
gi|194187547|gb|EDX01131.1| GE16818 [Drosophila yakuba]
Length = 903
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+ +FV L CS+ E+ +F PF K+VRLV K ++ G + +V+F P A
Sbjct: 730 NKIFVRNLHPACSKEELHELFSPFGSIKDVRLVHKLNKQFKG----IAYVEFEKPGEAQR 785
Query: 193 AM 194
A+
Sbjct: 786 AV 787
>gi|260943586|ref|XP_002616091.1| hypothetical protein CLUG_03332 [Clavispora lusitaniae ATCC 42720]
gi|238849740|gb|EEQ39204.1| hypothetical protein CLUG_03332 [Clavispora lusitaniae ATCC 42720]
Length = 589
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES---------RHPGGDPLILCFVD 183
+TL+V LP D + E+ +F P G++ + +K H G +CFV+
Sbjct: 458 NTLYVGNLPPDATEAELRALFSPQKGFRRLSFRTKNQSSSSGSGSSGHNHGP---MCFVE 514
Query: 184 FVSPAHAATAMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSGGGHR 229
F AHA A+ L G + + K +RL F++ P G R G R
Sbjct: 515 FEDVAHATIALAELYGRALPRPNGSNGKGGIRLSFSKNPLGVRGPGNPR 563
>gi|168028479|ref|XP_001766755.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681964|gb|EDQ68386.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 235
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LFV+ LP + + + +F+ F G+KEVR++ + PG + FV+F A
Sbjct: 160 NNILFVQNLPHEATSLAIQVLFQQFPGFKEVRMIEAK---PG-----IAFVEFGDELQAT 211
Query: 192 TAMDALQGYRF 202
A+ L ++
Sbjct: 212 VALQGLHNFKI 222
>gi|328702215|ref|XP_001952194.2| PREDICTED: protein couch potato-like [Acyrthosiphon pisum]
Length = 295
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA-AT 192
TLFV GLP D RE+ +FR + GY+ L P + FV F + A A A
Sbjct: 58 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFQTRAGAEAA 115
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
D QG RFD ++ RL+FA+
Sbjct: 116 KQDLQQGVRFDPDMPQTI--RLEFAK 139
>gi|159164270|pdb|2DO4|A Chain A, Solution Structure Of The Rna Binding Domain Of Squamous
Cell Carcinoma Antigen Recognized By T Cells 3
Length = 100
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A+
Sbjct: 20 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 75
Query: 195 DALQGYRFDEH 205
+ G E+
Sbjct: 76 MKMDGMTIKEN 86
>gi|254580399|ref|XP_002496185.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
gi|238939076|emb|CAR27252.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
Length = 866
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 120 GGRSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
GG + P S + V+ LP + +R++V +F F K VR+ K + G
Sbjct: 726 GGSTNAPKQTRKKSGKIIVKNLPFEAARKDVFELFSSFGQLKSVRVPKKFDKSARG---- 781
Query: 179 LCFVDFVSPAHAATAMDALQG 199
FV+F+ P A AMD LQG
Sbjct: 782 FAFVEFLLPKEAENAMDQLQG 802
Score = 36.6 bits (83), Expect = 7.6, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF--VDFVSPAH 189
++++FV+ L + +++A F+PF G+ ++ +K G L + F V+F S A
Sbjct: 640 TASIFVKNLNFATTTQQLAEKFKPFDGFVVAQVKTKPDPSNTGKVLSMGFGFVEFKSRAQ 699
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
A ++AL G D H KL+L+ + G + + ++
Sbjct: 700 AVAVINALDGTALDGH-----KLQLKLSHRQGGSTNAPKQTRK 737
>gi|384499199|gb|EIE89690.1| hypothetical protein RO3G_14401 [Rhizopus delemar RA 99-880]
Length = 400
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFVS 186
PP +TL+V LP ++ E+ +F +GYK + + + + P +CFV+F
Sbjct: 292 PP--CNTLYVGNLPLCTNQEELRSLFSKCLGYKRMSFRIKSQQQGP------MCFVEFED 343
Query: 187 PAHAATAMDALQGYRFDEHDRDSVK--LRLQFARYP 220
A+ AM LQG+ +S+K +RL F++ P
Sbjct: 344 VLCASQAMSQLQGFALS----NSLKGGIRLSFSKNP 375
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 7/115 (6%)
Query: 104 GMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVR 163
+DP A L G S P+P D + T+FV G P D RE ++F G++
Sbjct: 13 AIDPSSPTLSAAQSLFSGTS--PVPEDVT-TIFVVGFPDDMQEREFQNMFLFSKGFEGAS 69
Query: 164 L----VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
L E + ++ F F + + A A+D L G + D +K +
Sbjct: 70 LKWHCKQDEETNENNKKQMIGFARFATRSEAIEAVDVLNGRKVDSEKSSILKAEM 124
>gi|410080061|ref|XP_003957611.1| hypothetical protein KAFR_0E03240 [Kazachstania africana CBS 2517]
gi|372464197|emb|CCF58476.1| hypothetical protein KAFR_0E03240 [Kazachstania africana CBS 2517]
Length = 381
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
+++ LFV P D E+ IF PF KEV++++ FV+F A
Sbjct: 86 STTRLFVRPFPLDVQESELNEIFSPFGPMKEVKILNG-----------FAFVEFEESDSA 134
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARY 219
A A++ + G F + V +L RY
Sbjct: 135 ARAIEEVNGKSFANQPLEVVYSKLPAKRY 163
>gi|326506974|dbj|BAJ95564.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 259
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Query: 126 PLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFV 185
P P TLFV GLP D RE+ ++F G+ L + G + FV F
Sbjct: 33 PDPRQGVVTLFVAGLPDDVKPREIHNLFSRRPGFDHCLL-----EYTGRGNQAVAFVSFF 87
Query: 186 SPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRG 230
+ A +AM +L G FD + D L ++ A+ + GG G
Sbjct: 88 THHAALSAMASLNGSVFDPDNGDC--LHIELAKSNSRKRHGGQGG 130
>gi|321265410|ref|XP_003197421.1| RNA binding protein [Cryptococcus gattii WM276]
gi|317463901|gb|ADV25634.1| RNA binding protein, putative [Cryptococcus gattii WM276]
Length = 286
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 14/107 (13%)
Query: 108 GPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
GP+AK + L + LPP+ S LFV+ LP + ++ +F G E+R +
Sbjct: 191 GPAAKKQRLQMPDEY----LPPN--SVLFVQNLPDGTTSEDLREVFEVHPGLIEIRTIPA 244
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
+ + FV+F A A DAL ++ D + V + L
Sbjct: 245 KKD--------IAFVEFADEGAATVAKDALHNFKIDGETKMKVNVLL 283
>gi|398366591|ref|NP_010720.3| Npl3p [Saccharomyces cerevisiae S288c]
gi|400605|sp|Q01560.1|NOP3_YEAST RecName: Full=Nucleolar protein 3; AltName: Full=Mitochondrial
targeting suppressor 1 protein; AltName: Full=Nuclear
polyadenylated RNA-binding protein 1
gi|4040|emb|CAA46817.1| nucleolar protein [Saccharomyces cerevisiae]
gi|172052|gb|AAA34818.1| Npl3p [Saccharomyces cerevisiae]
gi|288587|emb|CAA50291.1| Mts1p [Saccharomyces cerevisiae]
gi|927699|gb|AAB64865.1| Npl3p: nucleolar RNA processing and export protein [Saccharomyces
cerevisiae]
gi|151942401|gb|EDN60757.1| nuclear shuttling protein [Saccharomyces cerevisiae YJM789]
gi|190404638|gb|EDV07905.1| nucleolar protein NOP3 [Saccharomyces cerevisiae RM11-1a]
gi|259145668|emb|CAY78932.1| Npl3p [Saccharomyces cerevisiae EC1118]
gi|285811446|tpg|DAA12270.1| TPA: Npl3p [Saccharomyces cerevisiae S288c]
gi|323333961|gb|EGA75347.1| Npl3p [Saccharomyces cerevisiae AWRI796]
gi|323349057|gb|EGA83289.1| Npl3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355452|gb|EGA87274.1| Npl3p [Saccharomyces cerevisiae VL3]
gi|365766219|gb|EHN07718.1| Npl3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392300550|gb|EIW11641.1| Npl3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 414
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
+++ LFV P D E+ IF PF KEV++++ FV+F A
Sbjct: 123 SNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILNG-----------FAFVEFEEAESA 171
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARY 219
A A++ + G F + V +L RY
Sbjct: 172 AKAIEEVHGKSFANQPLEVVYSKLPAKRY 200
>gi|349577479|dbj|GAA22648.1| K7_Npl3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 414
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
+++ LFV P D E+ IF PF KEV++++ FV+F A
Sbjct: 123 SNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILNG-----------FAFVEFEEAESA 171
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARY 219
A A++ + G F + V +L RY
Sbjct: 172 AKAIEEVHGKSFANQPLEVVYSKLPAKRY 200
>gi|390354851|ref|XP_793863.3| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like, partial [Strongylocentrotus purpuratus]
Length = 547
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+ LFV GLP + E+ F F K VR+V+ +S P G L +VDF + A A
Sbjct: 441 NKLFVSGLPRTLTTEELEKTFSKFGKLKGVRIVTFKSGVPKG----LAYVDFENEASATR 496
Query: 193 AMDALQGYRFDEH 205
A+ L + EH
Sbjct: 497 AVMGLDNTQIGEH 509
>gi|367043256|ref|XP_003652008.1| hypothetical protein THITE_2112877 [Thielavia terrestris NRRL 8126]
gi|346999270|gb|AEO65672.1| hypothetical protein THITE_2112877 [Thielavia terrestris NRRL 8126]
Length = 513
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K + +CFV+F + A
Sbjct: 332 NTLYVGNLPLDTSEEELKAMFSKQRGYKRLCFRTKANGP-------MCFVEFEDISFATK 384
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARS 224
A+ L G H+ +RL F++ P G RS
Sbjct: 385 ALKELYGQPL--HNSVKGGIRLSFSKNPLGVRS 415
>gi|126303676|ref|XP_001374230.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like isoform 1
[Monodelphis domestica]
Length = 225
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPDA--SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
PG + + A G ++ P PD + LF+ LP + + ++ +F + +KEVRL
Sbjct: 124 PGQATPNSA-NTQGNSTQNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQYPVFKEVRL 182
Query: 165 VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRF 202
RH + FV+F + A A DALQG++
Sbjct: 183 --GPGRHD------IAFVEFENDGQAGAARDALQGFKI 212
>gi|334312138|ref|XP_003339722.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Monodelphis
domestica]
Length = 180
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
PG + + A G ++ P PD + LF+ LP + + ++ +F + +KEVRL
Sbjct: 79 PGQATPNSA-NTQGNSTQNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQYPVFKEVRL 137
Query: 165 VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYR 201
RH + FV+F + A A DALQG++
Sbjct: 138 --GPGRHD------IAFVEFENDGQAGAARDALQGFK 166
>gi|297835092|ref|XP_002885428.1| hypothetical protein ARALYDRAFT_479641 [Arabidopsis lyrata subsp.
lyrata]
gi|297331268|gb|EFH61687.1| hypothetical protein ARALYDRAFT_479641 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
P D T+F+ GLP D RE+ ++ R GY E V+ + P G F F +
Sbjct: 54 PYDELRTIFIAGLPDDVKERELLNLLRWLPGY-EASQVNFKGEKPMG------FALFSTA 106
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRL 214
+A A D LQ FD + + +
Sbjct: 107 QYAMAAKDNLQHMVFDAESKSVIHTEM 133
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP +TLF+ L + + E+ + G+K+++++ +E RH +CF++F
Sbjct: 230 PP--CNTLFIGNLGENINEEELRSLLSAQPGFKQMKILRQE-RH------TVCFIEFEDV 280
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFARYP-GARSGGG 227
A LQG S+ +R+Q+++ P G R GG
Sbjct: 281 NSATNVHHNLQGAVIP--SSGSIGMRIQYSKNPYGKRKEGG 319
>gi|256270661|gb|EEU05825.1| Npl3p [Saccharomyces cerevisiae JAY291]
gi|323305350|gb|EGA59095.1| Npl3p [Saccharomyces cerevisiae FostersB]
Length = 409
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
+++ LFV P D E+ IF PF KEV++++ FV+F A
Sbjct: 118 SNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILNG-----------FAFVEFEEAESA 166
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARY 219
A A++ + G F + V +L RY
Sbjct: 167 AKAIEEVHGKSFANQPLEVVYSKLPAKRY 195
>gi|367021232|ref|XP_003659901.1| hypothetical protein MYCTH_2297450 [Myceliophthora thermophila ATCC
42464]
gi|347007168|gb|AEO54656.1| hypothetical protein MYCTH_2297450 [Myceliophthora thermophila ATCC
42464]
Length = 565
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A
Sbjct: 380 NTLYVGNLPLDTSEEELKAMFSRQRGYKRLCFRTKQNGP-------MCFVEFEDVTFATK 432
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARS 224
A+ L G H+ +RL F++ P G RS
Sbjct: 433 ALHELYGQPL--HNSVKGGIRLSFSKNPLGVRS 463
>gi|82542283|gb|ABB82038.1| RNP4F [Drosophila melanogaster]
Length = 260
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+ +FV L CS+ E+ +F PF K+VRLV K ++ G + +V+F P A
Sbjct: 183 NKIFVRNLHPACSKEELHELFSPFGTIKDVRLVHKLNKQFKG----IAYVEFEKPGEAQR 238
Query: 193 AMDALQGYRFD 203
A+ G F
Sbjct: 239 AVAGRDGCLFK 249
>gi|156849149|ref|XP_001647455.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
gi|156118141|gb|EDO19597.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
Length = 863
Score = 41.6 bits (96), Expect = 0.29, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 24/118 (20%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R+++ +F F K VR+ K + G F++F+ P A
Sbjct: 737 SGKIIVKNLPFEATRKDIFDLFSSFGQLKSVRVPKKFDKSARG----FAFIEFLLPKEAE 792
Query: 192 TAMDALQGYRF------------------DEHDRDSVKLRLQFA--RYPGARSGGGHR 229
AMD LQG +E R + K R Q A Y + GG R
Sbjct: 793 NAMDQLQGVHLLGRRLVMQYAQEEAVNAEEEISRMTQKARKQMATREYGALKKAGGRR 850
>gi|194888671|ref|XP_001976954.1| GG18501 [Drosophila erecta]
gi|190648603|gb|EDV45881.1| GG18501 [Drosophila erecta]
Length = 896
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+ +FV L CS+ E+ +F PF K+VRLV K ++ G + +V+F P A
Sbjct: 728 NKIFVRNLHPACSKEELHELFSPFGSIKDVRLVHKLNKQFKG----IAYVEFEKPGEAQR 783
Query: 193 AM 194
A+
Sbjct: 784 AV 785
>gi|302842092|ref|XP_002952590.1| hypothetical protein VOLCADRAFT_32205 [Volvox carteri f.
nagariensis]
gi|300262229|gb|EFJ46437.1| hypothetical protein VOLCADRAFT_32205 [Volvox carteri f.
nagariensis]
Length = 257
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 115 ALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGG 174
A+ G ++ PP +TLF+ L E+ +F GYK+++L+ RHP
Sbjct: 159 AVSFGPVTNKFDNPP--CNTLFIGNLGDTVDENELMQVFGNQPGYKQLKLL----RHPRQ 212
Query: 175 DPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYP 220
+ CFV+FV A A+ LQG DR + R+Q+++ P
Sbjct: 213 ---VSCFVEFVDMASASAVHSRLQGCILHTSDRGPI--RIQYSKNP 253
>gi|194379396|dbj|BAG63664.1| unnamed protein product [Homo sapiens]
Length = 527
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A+
Sbjct: 367 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 422
Query: 195 DALQGYRFDEH 205
+ G E+
Sbjct: 423 MKMDGMTIKEN 433
>gi|358054072|dbj|GAA99871.1| hypothetical protein E5Q_06574 [Mixia osmundae IAM 14324]
Length = 302
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 15/92 (16%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LFV+ LP ++ + +F F EVR++ PG + FV+F
Sbjct: 225 LPPN--KILFVQNLPDSVNKDALETLFTQFPNLSEVRMI------PGRKG--IAFVEFTD 274
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ A +AL +++E K+++ FAR
Sbjct: 275 ETSSGVAREALHNQKYEES-----KIKVTFAR 301
>gi|444317805|ref|XP_004179560.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
gi|387512601|emb|CCH60041.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
Length = 868
Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+ V+ LP + +R+++ +F F K VR+ K + G FV+F+ P A AM
Sbjct: 743 IIVKNLPFEATRKDIFELFSSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAENAM 798
Query: 195 DALQG 199
D LQG
Sbjct: 799 DQLQG 803
>gi|410923104|ref|XP_003975022.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Takifugu rubripes]
Length = 933
Score = 41.2 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+F+ GLP C+++++ + + ++VRLV+ S P G L +V+F HA+ A+
Sbjct: 776 IFISGLPFSCTKKQLEEVCSSYGTIRDVRLVTYRSGKPKG----LAYVEFAEETHASQAV 831
Query: 195 DALQGYRFD 203
+ G D
Sbjct: 832 LKMDGTVID 840
>gi|84995232|ref|XP_952338.1| U1/2 small nuclear ribonucleoprotein [Theileria annulata strain
Ankara]
gi|65302499|emb|CAI74606.1| U1/2 small nuclear ribonucleoprotein, putative [Theileria annulata]
Length = 206
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D S +LFV+ +P D SR + +F+ + G++ R + E R + FVD+ +
Sbjct: 131 DESHSLFVQNIPHDMSRESLELLFKQYPGFRGCRFI--EGR-------FVAFVDYSMASQ 181
Query: 190 AATAMDALQGYR 201
A A++ L G+R
Sbjct: 182 AEIALEGLNGFR 193
>gi|410075513|ref|XP_003955339.1| hypothetical protein KAFR_0A07700 [Kazachstania africana CBS 2517]
gi|372461921|emb|CCF56204.1| hypothetical protein KAFR_0A07700 [Kazachstania africana CBS 2517]
Length = 571
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + +E+ +F G++ + +K S G P +CFV+F + A
Sbjct: 442 NTLYVGNLPPDATEQELRQLFSKQQGFRRLSFKNKSSNGNGHGP--MCFVEFDDVSFATR 499
Query: 193 AMDALQGYRFDEHDRDSV-KLRLQFARYP 220
A+ L G + + +RL F++ P
Sbjct: 500 ALAELYGSQLPRTTTSNKGGIRLSFSKNP 528
>gi|237829859|ref|XP_002364227.1| small nuclear ribonucleoprotein U1A, putative [Toxoplasma gondii
ME49]
gi|211961891|gb|EEA97086.1| small nuclear ribonucleoprotein U1A, putative [Toxoplasma gondii
ME49]
gi|221487300|gb|EEE25532.1| small nuclear ribonucleoprotein U1A, putative [Toxoplasma gondii
GT1]
gi|221507093|gb|EEE32697.1| small nuclear ribonucleoprotein U1A, putative [Toxoplasma gondii
VEG]
Length = 385
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
P + LF+E LP D + + +F G EVR V + FV++ +
Sbjct: 307 FPAMPNKVLFLENLPEDATMEGLVSLFSKHAGMIEVRPVLWRR---------VAFVEYDN 357
Query: 187 PAHAATAMDALQGYRFD 203
AA AM+ALQGY +
Sbjct: 358 EMLAANAMNALQGYNMN 374
>gi|402083842|gb|EJT78860.1| multiple RNA-binding domain-containing protein 1 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 842
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGDPLILC----FVDFVS 186
+++LFV GL + ++A FRP G+ R+ S+ +S+ PG ++L FV+F +
Sbjct: 606 TTSLFVRGLNFATTTEKLAETFRPLDGFVSARVKSRTDSKRPG---VVLSMGFGFVEFRT 662
Query: 187 PAHAATAMDALQGYRFDEH 205
A A+ + GY + H
Sbjct: 663 KEQAHAALKTMDGYTLEGH 681
>gi|330933232|ref|XP_003304096.1| hypothetical protein PTT_16533 [Pyrenophora teres f. teres 0-1]
gi|311319509|gb|EFQ87793.1| hypothetical protein PTT_16533 [Pyrenophora teres f. teres 0-1]
Length = 244
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ TLF++ +P D + IF F G+KEVRLVS + + F +F + A
Sbjct: 168 NKTLFLQNIPRDVDEDTLTTIFERFEGFKEVRLVSVRA---------VAFAEFENEQFAI 218
Query: 192 TAMDA 196
TA +A
Sbjct: 219 TAKEA 223
>gi|207346289|gb|EDZ72828.1| YDR432Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 322
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
+++ LFV P D E+ IF PF KEV++++ FV+F A
Sbjct: 31 SNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILNG-----------FAFVEFEEAESA 79
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARY 219
A A++ + G F + V +L RY
Sbjct: 80 AKAIEEVHGKSFANQPLEVVYSKLPAKRY 108
>gi|58262246|ref|XP_568533.1| RNA binding protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134118674|ref|XP_771840.1| hypothetical protein CNBN0220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254444|gb|EAL17193.1| hypothetical protein CNBN0220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230707|gb|AAW47016.1| RNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 285
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 14/107 (13%)
Query: 108 GPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
GP+AK + L + LPP+ S LFV+ LP + ++ +F G E+R +
Sbjct: 191 GPAAKKQRLQMPDEY----LPPN--SVLFVQNLPDGTTSEDLREVFEVHPGLIEIRTIPA 244
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRL 214
+ + FV+F A A DAL ++ D + V + L
Sbjct: 245 KKD--------IAFVEFADEGAATIAKDALHNFKIDGETKMKVSVLL 283
>gi|119618222|gb|EAW97816.1| squamous cell carcinoma antigen recognised by T cells 3, isoform
CRA_a [Homo sapiens]
Length = 575
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A+
Sbjct: 415 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 470
Query: 195 DALQGYRFDEH 205
+ G E+
Sbjct: 471 MKMDGMTIKEN 481
>gi|146197835|dbj|BAF57630.1| TLS-associated protein [Dugesia japonica]
Length = 201
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
P +S+T++V +P D R E+ IF Y + + + G P FV F
Sbjct: 2 PRSSTTIYVGNIPEDLRRDELKRIF---GRYGNIVAATLPVDYYSGIPKGFAFVQFEDIR 58
Query: 189 HAATAMDALQGYRFDEHDRDSVKLRLQFA 217
A + D LQGYR + LRL+FA
Sbjct: 59 DAEESFDRLQGYRIGKRS-----LRLEFA 82
>gi|384496525|gb|EIE87016.1| hypothetical protein RO3G_11727 [Rhizopus delemar RA 99-880]
Length = 292
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 16/93 (17%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV-SKESRHPGGDPLILCFVDFV 185
LPP+ S LF++ LP +++++ +F+ + G++EVR V +K+S + FV++
Sbjct: 214 LPPN--SILFLQNLPETITQQQLVDLFQRYPGFREVRTVPAKKS---------IAFVEYE 262
Query: 186 SPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ +A A L GY F D+ L++ FAR
Sbjct: 263 NEIQSAVARAELSGY-FLGPDQ---ALKVTFAR 291
>gi|426247439|ref|XP_004017493.1| PREDICTED: LOW QUALITY PROTEIN: squamous cell carcinoma antigen
recognized by T-cells 3 [Ovis aries]
Length = 966
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A+
Sbjct: 806 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYENESEASQAV 861
Query: 195 DALQGYRFDEH 205
+ G E+
Sbjct: 862 LKMDGMTIREN 872
>gi|67516279|ref|XP_658025.1| hypothetical protein AN0421.2 [Aspergillus nidulans FGSC A4]
gi|74681510|sp|Q5BGA9.1|MRD1_EMENI RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|40747364|gb|EAA66520.1| hypothetical protein AN0421.2 [Aspergillus nidulans FGSC A4]
gi|259489335|tpe|CBF89520.1| TPA: Multiple RNA-binding domain-containing protein 1
[Source:UniProtKB/Swiss-Prot;Acc:Q5BGA9] [Aspergillus
nidulans FGSC A4]
Length = 819
Score = 41.2 bits (95), Expect = 0.36, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVSPA 188
A++TLF++ L + + + FRP G+ R+ +K + ++PG + F DF + A
Sbjct: 590 ATATLFIKNLNFSTTNQSLIEAFRPLDGFVSARIKTKPDPKNPGQTLSMGFGFADFKTKA 649
Query: 189 HAATAMDALQGYRFDEH 205
A A+ + GY D H
Sbjct: 650 QAQAALAVMNGYTLDRH 666
>gi|388583280|gb|EIM23582.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 263
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LPS S+ ++ IF + EVR++ P + FV+++
Sbjct: 185 LPPNV--ILFIQNLPSGTSKEKLEEIFGQYPNLAEVRVIPA---RPD-----IAFVEYMD 234
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ ++ A DAL Y+ E D+ +++ FAR
Sbjct: 235 ESSSSVAKDALNNYQI-ESDK---PIKVTFAR 262
>gi|189205961|ref|XP_001939315.1| U2 small nuclear ribonucleoprotein B [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975408|gb|EDU42034.1| U2 small nuclear ribonucleoprotein B [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 244
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ TLF++ +P D + IF F G+KEVRLVS + + F +F + A
Sbjct: 168 NKTLFLQNIPRDVDEDTLTAIFERFEGFKEVRLVSVRA---------VAFAEFENEQFAI 218
Query: 192 TAMDA 196
TA +A
Sbjct: 219 TAKEA 223
>gi|123485368|ref|XP_001324476.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121907359|gb|EAY12253.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 576
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 132 SSTLFVEGLPSDCSRR-EVAHIFRPFVGYKEVRLVSK--ESRHPGGDPLILCFVDFVSPA 188
++TL V+ LP +++ E+A F+ K +R+ K E H G CF+DF +
Sbjct: 474 TTTLIVKNLPFTVTKKSEIAEAFKHVGNIKAIRMTKKRNEQGHRG-----FCFIDFTTRQ 528
Query: 189 HAATAMDALQ 198
A A DA+Q
Sbjct: 529 AAQAAFDAMQ 538
>gi|290992905|ref|XP_002679074.1| predicted protein [Naegleria gruberi]
gi|284092689|gb|EFC46330.1| predicted protein [Naegleria gruberi]
Length = 212
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRRE--VAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
R E L P SS LF+E LP D + + +F + GYK++RLV ++
Sbjct: 128 SRREENLVP--SSVLFIENLPRDVEKSSELLETLFNNYDGYKKLRLVGEKG--------- 176
Query: 179 LCFVDFVSPAHAATAMDALQGYRFDEH 205
+ FV++ + A +A + LQ ++ +
Sbjct: 177 VAFVEYETIEQATSAREGLQSWKIKQQ 203
>gi|156847787|ref|XP_001646777.1| hypothetical protein Kpol_1023p90 [Vanderwaltozyma polyspora DSM
70294]
gi|156117457|gb|EDO18919.1| hypothetical protein Kpol_1023p90 [Vanderwaltozyma polyspora DSM
70294]
Length = 415
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
+++ LFV P D E+ IF PF KEV++++ FV+F A
Sbjct: 115 STTRLFVRPFPLDVQESELNEIFAPFGSMKEVKILNG-----------FAFVEFEDSESA 163
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARY 219
A A++ + G F + + V R+ RY
Sbjct: 164 AKAIEEVNGKTFADQPLEVVYSRVTPKRY 192
>gi|348528531|ref|XP_003451770.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Oreochromis niloticus]
Length = 948
Score = 41.2 bits (95), Expect = 0.39, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+F+ GLP C++ ++A I + KEVRLV+ S P G L +V+F A+ A+
Sbjct: 786 IFISGLPFSCTKEQLAEICKNHGTVKEVRLVTYRSGKPKG----LAYVEFADETQASQAV 841
Query: 195 DALQG 199
L G
Sbjct: 842 LKLDG 846
>gi|298707794|emb|CBJ30225.1| RNA binding / nucleic acid binding [Ectocarpus siliculosus]
Length = 252
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 14/86 (16%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+ L+ GLP + ++ ++ +F + G+ E R+ PGG F++F A
Sbjct: 179 NILYATGLPPEITQVMLSKLFEQYPGFSEARMA------PGGQ----AFIEFADQMQAGI 228
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
A++AL G++ + L+L FAR
Sbjct: 229 ALNALNGFKLSATN----PLQLAFAR 250
>gi|146183888|ref|XP_001027266.2| U1 small nuclear ribonucleoprotein A [Tetrahymena thermophila]
gi|146143436|gb|EAS07024.2| U1 small nuclear ribonucleoprotein A [Tetrahymena thermophila
SB210]
Length = 247
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLF+E LP + + + F F G+KEVRLV ++ + FV++ A A
Sbjct: 176 TLFLENLPINSNTEVIKAFFATFPGFKEVRLVPQKR---------VAFVEYEDENKATAA 226
Query: 194 MDALQGYR 201
+ +LQ ++
Sbjct: 227 LASLQSFK 234
>gi|240254272|ref|NP_564685.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|75337149|sp|Q9SEU4.1|SR33_ARATH RecName: Full=Serine/arginine-rich splicing factor 33; AltName:
Full=SC35-like splicing factor 33; Short=At-SCL33;
Short=AtSCL33
gi|6572475|gb|AAF17288.1|AF099940_1 Serine/arginine-rich protein [Arabidopsis thaliana]
gi|9843659|emb|CAC03603.1| SC35-like splicing factor SCL33, 33 kD [Arabidopsis thaliana]
gi|56744214|gb|AAW28547.1| At1g55310 [Arabidopsis thaliana]
gi|332195101|gb|AEE33222.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 287
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P G GGRS D ++L V L DC + ++ F F
Sbjct: 11 PRGYGRRGRSPSPR------GRYGGRSR-----DLPTSLLVRNLRHDCRQEDLRKSFEQF 59
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGY 200
K++ L + GDP FV F+ PA AA A + GY
Sbjct: 60 GPVKDIYLPRD---YYTGDPRGFGFVQFMDPADAADAKHHMDGY 100
>gi|171690714|ref|XP_001910282.1| hypothetical protein [Podospora anserina S mat+]
gi|170945305|emb|CAP71417.1| unnamed protein product [Podospora anserina S mat+]
Length = 248
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 17/98 (17%)
Query: 109 PSAKDRALGL----GGGRSEVP---LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKE 161
P+ R GL G + VP LPP+ LFV+ LP D + E+ IF F G++E
Sbjct: 144 PTKNARGAGLKSTGAGAAAVVPDEYLPPN--RILFVQNLPDDFGKDELTGIFSRFEGFRE 201
Query: 162 VRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
VR V PG + FV++ + A A TA + G
Sbjct: 202 VRTV------PGRSG--IAFVEYDAEAGAITAKENTAG 231
>gi|357611617|gb|EHJ67566.1| putative Protein couch potato [Danaus plexippus]
Length = 324
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA-AT 192
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 18 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFHTRAGAEAA 75
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
D QG RFD ++ RL+FA+
Sbjct: 76 KQDLQQGVRFDPDMPQTI--RLEFAK 99
>gi|449447968|ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
gi|449515829|ref|XP_004164950.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 335
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP +TLF+ L + + E+ +F G+K+++++ +E RH +CF++F
Sbjct: 228 PP--CNTLFIGNLGENVNEEELRGLFSVQPGFKQMKILRQE-RH------TVCFIEFEDV 278
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFARYP 220
+A +LQG SV +R+QF++ P
Sbjct: 279 NNATNVHHSLQGAVIP--SSGSVGMRIQFSKNP 309
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D T+F+ GLP D RE+ ++ R GY E V+ + P G F F +
Sbjct: 54 DEVRTIFITGLPEDVKERELQNLLRWLPGY-EASQVNFKGEKPMG------FALFSNAQF 106
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A A DALQ FD + + +
Sbjct: 107 AIAAKDALQDMVFDAESKSVLHTEM 131
>gi|302844343|ref|XP_002953712.1| hypothetical protein VOLCADRAFT_106063 [Volvox carteri f.
nagariensis]
gi|300261121|gb|EFJ45336.1| hypothetical protein VOLCADRAFT_106063 [Volvox carteri f.
nagariensis]
Length = 500
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 149 VAHIFRPFVG--YKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHD 206
+A +FR F G Y +++ R G CFV++ +P AATA+ L G F H
Sbjct: 325 LARLFRKFNGMEYCDLKKDPATGRSKG-----FCFVNYSTPEAAATAVAQLNGIEFPPHS 379
Query: 207 RDSVKLRLQFARYPGARSGGG 227
+L++ FA G R+ G
Sbjct: 380 NQ--RLKVMFAEQLGTRTNNG 398
>gi|45185072|ref|NP_982789.1| ABL158Cp [Ashbya gossypii ATCC 10895]
gi|44980708|gb|AAS50613.1| ABL158Cp [Ashbya gossypii ATCC 10895]
gi|374105991|gb|AEY94901.1| FABL158Cp [Ashbya gossypii FDAG1]
Length = 729
Score = 40.8 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 108 GPSAKDRALGLGGGRSEVPL------PPDAS--------STLFVEGLPSDCSRREVAHIF 153
GP AL G S+V L PP A+ +TL+V LP D + +E+ +F
Sbjct: 568 GPKNAAAALQNTNGISQVDLSLLAKVPPPANPADQNPPCNTLYVGNLPPDATEQELRQLF 627
Query: 154 RPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGY---RFDEHDRDSV 210
G++ + +K + G P +CFV+F AHA A+ L G R +
Sbjct: 628 SSQKGFRRLSFRNKNNNGNGHGP--MCFVEFEDVAHATRALAELYGSQLARTSGTHNNKG 685
Query: 211 KLRLQFARYP-GARSGGGHRG 230
+RL F++ P G R RG
Sbjct: 686 GIRLSFSKNPLGVRGPNSRRG 706
>gi|308802782|ref|XP_003078704.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116057157|emb|CAL51584.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 907
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 121 GRSEVPLPPDASST-LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGDPLI 178
G+ +P S+T L + + + ++R++ +F PF K+VRL K + H G
Sbjct: 787 GKESSKVPTGFSATKLVIRNVAFEATKRDIQKLFNPFGQLKQVRLPKKFDGAHRG----- 841
Query: 179 LCFVDFVSPAHAATAMDALQG 199
FV+F + AMDAL+G
Sbjct: 842 FAFVEFNTARETQAAMDALKG 862
>gi|15293081|gb|AAK93651.1| unknown protein [Arabidopsis thaliana]
Length = 263
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P G GGRS D ++L V L DC + ++ F F
Sbjct: 11 PRGYGRRGRSPSPR------GRYGGRSR-----DLPTSLLVRNLRHDCRQEDLRKSFEQF 59
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGY 200
K++ L + GDP FV F+ PA AA A + GY
Sbjct: 60 GPVKDIYLPRD---YYTGDPRGFGFVQFMDPADAADAKHHMDGY 100
>gi|50307487|ref|XP_453723.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690224|sp|Q6CQR6.1|MRD1_KLULA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49642857|emb|CAH00819.1| KLLA0D14949p [Kluyveromyces lactis]
Length = 878
Score = 40.8 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+ V+ LP + +R++V +F F K VR+ K + G FV+F+ P A AM
Sbjct: 754 IIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAENAM 809
Query: 195 DALQG 199
D LQG
Sbjct: 810 DQLQG 814
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T++V LPSD +E+ IF Y E+R + +SR D F+ F A A
Sbjct: 5 TVYVGNLPSDVREKEIEDIFHK---YGEIRNIDIKSR--SRDSPAFAFIQFDDRRDAKEA 59
Query: 194 MDALQGYRFDEHDRDSVKLRLQF 216
+ A GY FD +LR++F
Sbjct: 60 VRACDGYEFD-----GKRLRVEF 77
>gi|397570464|gb|EJK47313.1| hypothetical protein THAOC_33975 [Thalassiosira oceanica]
Length = 384
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS-KESRHPGGDPLILCFVDFVSPAHAA 191
+TL V + + S ++ +F PF V L KE+ G FV FV AA
Sbjct: 265 NTLRVTNISEEASEADLQDLFSPFGRISRVYLAKDKETMQSRG----FAFVSFVHREDAA 320
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFAR 218
AMD LQG+ +D + L+L++AR
Sbjct: 321 RAMDKLQGHGYDH-----LILKLEWAR 342
>gi|358393470|gb|EHK42871.1| hypothetical protein TRIATDRAFT_164924, partial [Trichoderma
atroviride IMI 206040]
Length = 446
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + E+ +F GYK + +K + +CFV+F + A
Sbjct: 300 NTLYVGNLPVDTAEEELKAMFCKQRGYKRLCFRTKANGP-------MCFVEFEDISLATR 352
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A++ + G H+ +RL F++ P G RSG
Sbjct: 353 ALNEMYGALL--HNSTKGGIRLSFSKNPLGVRSG 384
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A S ++V LP D +++ +F Y ++ + ++R G P FV+F P A
Sbjct: 5 AESRVYVGNLPPDIRTKDIEDLFH---KYGKITFIDLKNRR--GPPF--AFVEFEDPRDA 57
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGG 227
A+ A GY D D KLR++F R AR GG
Sbjct: 58 EDAVSARDGY-----DYDGYKLRVEFPRGNSARPRGG 89
>gi|297847894|ref|XP_002891828.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
gi|297337670|gb|EFH68087.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P G GGRS D ++L V L DC + ++ F F
Sbjct: 11 PRGYGRRGRSPSPR------GRYGGRSR-----DLPTSLLVRNLRHDCRQEDLRKSFEQF 59
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGY 200
K++ L + GDP FV F+ PA AA A + GY
Sbjct: 60 GPVKDIYLPRD---YYTGDPRGFGFVQFMDPADAADAKHHMDGY 100
>gi|440893379|gb|ELR46176.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Bos
grunniens mutus]
Length = 958
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV GLP C++ E+ I + K++RLV+ + P G L +V++ + A+ A+
Sbjct: 804 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYENELQASQAV 859
Query: 195 DALQGYRFDEH 205
+ G E+
Sbjct: 860 LKMDGMTIREN 870
>gi|194900318|ref|XP_001979704.1| GG22582 [Drosophila erecta]
gi|190651407|gb|EDV48662.1| GG22582 [Drosophila erecta]
Length = 745
Score = 40.8 bits (94), Expect = 0.46, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA-AT 192
TLFV GLP D RE+ +FR + GY+ L P + FV F + A A A
Sbjct: 65 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 122
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
D QG RFD ++ RL+FA+
Sbjct: 123 KQDLQQGVRFDPDMPQTI--RLEFAK 146
>gi|365988166|ref|XP_003670914.1| hypothetical protein NDAI_0F03530 [Naumovozyma dairenensis CBS 421]
gi|343769685|emb|CCD25671.1| hypothetical protein NDAI_0F03530 [Naumovozyma dairenensis CBS 421]
Length = 640
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI----------LCFV 182
+TL+V LP DC+ +E+ +F G+K RL + + + ++ +CFV
Sbjct: 485 NTLYVGNLPVDCTEQELRQLFSTQEGFK--RLSFRVKNNNSNNVMLSNSNSAAHGPMCFV 542
Query: 183 DFVSPAHAATAMDALQGYRFDEHD-RDSVKLRLQFARYPGARSGGGHR 229
+F A+A A+ L G + + +RL F++ P G +R
Sbjct: 543 EFEDIAYATKALAELYGTQLPRATPSNKGGIRLSFSKNPLGVRGPNNR 590
>gi|30686138|ref|NP_683582.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|13605613|gb|AAK32800.1|AF361632_1 At3g21211 [Arabidopsis thaliana]
gi|23505943|gb|AAN28831.1| At3g21211/At3g21211 [Arabidopsis thaliana]
gi|26451397|dbj|BAC42798.1| unknown protein [Arabidopsis thaliana]
gi|110740646|dbj|BAE98426.1| hypothetical protein [Arabidopsis thaliana]
gi|222423570|dbj|BAH19754.1| AT3G21215 [Arabidopsis thaliana]
gi|332642956|gb|AEE76477.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 339
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
P D T+F+ GLP D RE+ ++ R GY E V+ + P G F F +
Sbjct: 54 PYDELRTIFIAGLPDDVKERELLNLLRWLPGY-EASQVNFKGEKPMG------FALFSTA 106
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRL 214
A A D LQ FD + + +
Sbjct: 107 QFAMAAKDTLQHMVFDAESKSVIHTEM 133
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP +TLF+ L + + E+ + G+K+++++ +E RH +CF++F
Sbjct: 230 PP--CNTLFIGNLGENINEEELRSLLSAQPGFKQMKILRQE-RH------TVCFIEFEDV 280
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFARYP-GARSGGG 227
A LQG S+ +R+Q+++ P G R GG
Sbjct: 281 NSATNVHHNLQGAVIP--SSGSIGMRIQYSKNPYGKRKEGG 319
>gi|323350239|gb|EGA84386.1| Mrd1p [Saccharomyces cerevisiae VL3]
Length = 887
Score = 40.8 bits (94), Expect = 0.47, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 817
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 818 NAMDQLHG 825
>gi|323346831|gb|EGA81110.1| Whi3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 629
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGYRFDEHDRDSVK----LRLQFARYP 220
A+ L G + R +V +RL F++ P
Sbjct: 598 ALAELYGXQL---PRSTVSSKGGIRLSFSKKP 626
>gi|330802792|ref|XP_003289397.1| hypothetical protein DICPUDRAFT_80171 [Dictyostelium purpureum]
gi|325080515|gb|EGC34067.1| hypothetical protein DICPUDRAFT_80171 [Dictyostelium purpureum]
Length = 628
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+ S+ LF++ LP+D + ++ +F P+ E +++ + G FV F + +
Sbjct: 179 NPSNNLFIKPLPADVTDEQLRKLFEPYGKIVECKVMLDQ----NGQSKFAGFVRFFNDSE 234
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFA 217
AA+A+DA+ G + +DS L +++A
Sbjct: 235 AASAIDAMNGIKI---TKDSYPLVVKYA 259
>gi|323335900|gb|EGA77178.1| Whi3p [Saccharomyces cerevisiae Vin13]
Length = 629
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGYRFDEHDRDSVK----LRLQFARYP 220
A+ L G + R +V +RL F++ P
Sbjct: 598 ALAELYGXQL---PRSTVSSKGGIRLSFSKKP 626
>gi|349581915|dbj|GAA27072.1| K7_Mrd1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 887
Score = 40.8 bits (94), Expect = 0.49, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 817
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 818 NAMDQLHG 825
>gi|405953553|gb|EKC21194.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Crassostrea gigas]
Length = 970
Score = 40.8 bits (94), Expect = 0.50, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF++ LP CS+ + IF KEVR+V+ S P G L +V+F AA A+
Sbjct: 867 LFIKNLPFTCSKDALIQIFSEHGPVKEVRMVTYRSGAPKG----LAYVEFEDEQDAAKAV 922
Query: 195 DALQGYRFDEHD 206
G + +H+
Sbjct: 923 MKTDGLKIGDHE 934
>gi|207340299|gb|EDZ68693.1| YPR112Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269058|gb|EEU04395.1| Mrd1p [Saccharomyces cerevisiae JAY291]
Length = 887
Score = 40.8 bits (94), Expect = 0.50, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 817
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 818 NAMDQLHG 825
>gi|50288333|ref|XP_446595.1| hypothetical protein [Candida glabrata CBS 138]
gi|42557534|emb|CAE84437.1| putative Whi3 protein [Candida glabrata]
gi|49525903|emb|CAG59522.1| unnamed protein product [Candida glabrata]
Length = 671
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 544 NTLYVGNLPSDATEQELRQLFSNQFGFRRLSFRNKNANGTGHGHGPMCFVEFDDVSCATR 603
Query: 193 AMDALQGYRFDEHDRDSVK----LRLQFARYP 220
A+ L G + R +V +RL F++ P
Sbjct: 604 ALVELYGSQL---PRATVNTKGGIRLSFSKNP 632
>gi|326428976|gb|EGD74546.1| hypothetical protein PTSG_05910 [Salpingoeca sp. ATCC 50818]
Length = 215
Score = 40.4 bits (93), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
+ L+V LP ++ +V ++F F G EVR+V G P +CFV++ + +
Sbjct: 139 TNKILYVSHLPPTATKSDVHNLFAKFEGLVEVRMVD-------GRP-DMCFVEYETARAS 190
Query: 191 ATAMDALQGYRFDEHDRDSV 210
A AM L G+ E + SV
Sbjct: 191 AVAMQNLDGFSMGEDNTLSV 210
>gi|6325369|ref|NP_015437.1| Mrd1p [Saccharomyces cerevisiae S288c]
gi|74676381|sp|Q06106.1|MRD1_YEAST RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|914983|gb|AAB68082.1| Ypr112cp [Saccharomyces cerevisiae]
gi|285815635|tpg|DAA11527.1| TPA: Mrd1p [Saccharomyces cerevisiae S288c]
gi|392296115|gb|EIW07218.1| Mrd1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 887
Score = 40.4 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 817
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 818 NAMDQLHG 825
>gi|255731644|ref|XP_002550746.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131755|gb|EER31314.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 665
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES---------RHPGGDPLILCFVD 183
+TL+V LP D + E+ +F P G++ + +K H G +CFV+
Sbjct: 523 NTLYVGNLPPDATEAELRTLFSPQKGFRRLSFRTKNQSSTNGSGSTSHNHGP---MCFVE 579
Query: 184 FVSPAHAATAMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSGGGHR 229
F AHA A+ L G + + K +RL F++ P G R G R
Sbjct: 580 FEDVAHATRALAELYGSALPRPNGGNGKGGIRLSFSKNPLGVRGPGNPR 628
>gi|190408039|gb|EDV11304.1| multiple RNA-binding domain-containing protein 1 [Saccharomyces
cerevisiae RM11-1a]
Length = 887
Score = 40.4 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 817
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 818 NAMDQLHG 825
>gi|388582417|gb|EIM22722.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 725
Score = 40.4 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL--CFVDFVSP 187
+A+STLF++ + ++A IF GY+ R+ +K + L + FV F +
Sbjct: 505 EAASTLFIKNIAFSTPEAKLASIFSSLSGYRYARIQTKPDPKSAANRLSMGYGFVGFDNE 564
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFARY-----PGARSG 225
HA A+ ++Q Y D H L+++FA+ PGA G
Sbjct: 565 EHAKDALASMQKYVLDGH-----SLQVKFAQRGKDSEPGAAMG 602
>gi|328783037|ref|XP_394225.4| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Apis mellifera]
Length = 910
Score = 40.4 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP ++ ++ IF+ KEVR+V+ + H G L +++F AA A+
Sbjct: 760 LFVKGLPVSTTKEDLEEIFKVHGALKEVRIVTYRNGHSKG----LAYIEFKDENSAAKAL 815
Query: 195 DALQGYR 201
A G +
Sbjct: 816 LATDGMK 822
>gi|401623161|gb|EJS41268.1| mrd1p [Saccharomyces arboricola H-6]
Length = 886
Score = 40.4 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 761 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 816
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 817 NAMDQLHG 824
>gi|151942889|gb|EDN61235.1| multiple RNA-binding domain containing protein [Saccharomyces
cerevisiae YJM789]
Length = 887
Score = 40.4 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 817
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 818 NAMDQLHG 825
>gi|261188230|ref|XP_002620531.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239593278|gb|EEQ75859.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239609317|gb|EEQ86304.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ER-3]
gi|327354414|gb|EGE83271.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ATCC
18188]
Length = 825
Score = 40.4 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF--VDFVS 186
P +STLFV L + + +F+P G+ R+ +K G+ L + F V+F S
Sbjct: 593 PLETSTLFVRNLNFSTTNARLTEVFQPLDGFLSARVKTKTDPKRPGETLSMGFGFVEFRS 652
Query: 187 PAHAATAMDALQGYRFDEHD 206
A A A+ A+QGY+ D+H+
Sbjct: 653 SAQARAALAAMQGYKLDQHE 672
>gi|168043399|ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674440|gb|EDQ60948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
AS T++V LP D RE+ IF YK R+V + + P P CF++F A
Sbjct: 5 ASRTIYVGNLPGDVREREIEDIF-----YKYGRIVDIDLKLPPRPPG-YCFLEFEDARDA 58
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ GY FD + +LR++ A
Sbjct: 59 EDAIRGRDGYNFDGN-----RLRVEIA 80
>gi|119496815|ref|XP_001265181.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
gi|119413343|gb|EAW23284.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
Length = 825
Score = 40.4 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVS 186
P +STLFV+ L + + +F+P G+ R+ +K + + PG + FVDF +
Sbjct: 593 PVVTSTLFVKNLNFSTTNEKFTEVFKPLDGFVSARIKTKPDPKRPGQTLSMGFGFVDFRT 652
Query: 187 PAHAATAMDALQGYRFDEHD 206
A A A+ A+ GY+ D+H+
Sbjct: 653 KAQAQAALAAMNGYKLDQHE 672
>gi|340975878|gb|EGS22993.1| putative RNA binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 586
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K + +CFV+F A
Sbjct: 409 NTLYVGNLPHDTSEEELKAMFSKQRGYKRLCFRTKANGP-------MCFVEFEDVTFATK 461
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSG 225
A+ L G H+ +RL F++ P G RS
Sbjct: 462 ALHELYGQPL--HNSVKGGIRLSFSKNPLGVRSN 493
>gi|154296406|ref|XP_001548634.1| hypothetical protein BC1G_13029 [Botryotinia fuckeliana B05.10]
gi|347839105|emb|CCD53677.1| similar to multiple RNA-binding domain-containing protein 1
[Botryotinia fuckeliana]
Length = 838
Score = 40.4 bits (93), Expect = 0.58, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL--CFVDFVSPAH 189
++TLFV L + + + IF+P G+ R+ +K G L + F++F + +
Sbjct: 609 TTTLFVRNLNFSTTSQRLTEIFKPLDGFLSARVNTKTDPKKPGQVLSMGFGFIEFRTKSQ 668
Query: 190 AATAMDALQGYRFDEH 205
A A+ A+ GY D H
Sbjct: 669 AQAAIKAMDGYTLDNH 684
>gi|389600475|ref|XP_001562851.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504386|emb|CAM37284.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 943
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE---SRHPGGDPLIL 179
SEVP P L V+ LP + + R+V +F F + VR+ K S H +
Sbjct: 848 SEVP-PGSDPQKLIVKNLPFEATERDVRELFSAFSEIRSVRVPRKSHTFSSHRENNHRGF 906
Query: 180 CFVDFVSPAHAATAMDALQG-YRFDEHDRDSVKLRLQFARYPG 221
FV+F+S AA A++ L+ + + H L LQ+A+ G
Sbjct: 907 AFVEFLSEVEAARALETLKSTHLYGRH------LVLQYAKLDG 943
>gi|302307467|ref|NP_984131.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|442570228|sp|Q75A83.2|MRD1_ASHGO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|299789015|gb|AAS51955.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|374107347|gb|AEY96255.1| FADR035Cp [Ashbya gossypii FDAG1]
Length = 838
Score = 40.4 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 137 VEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDA 196
V+ LP + +R++V +F F K VR+ K + G FV+F+ P+ A AMD
Sbjct: 716 VKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARG----FAFVEFLLPSEAENAMDQ 771
Query: 197 LQG 199
LQG
Sbjct: 772 LQG 774
>gi|255557727|ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223540939|gb|EEF42497.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 264
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S T++V LPSD EV +F YK R++ E + P P CFV+F + A
Sbjct: 6 SRTIYVGNLPSDIREWEVEDLF-----YKYGRILDIELKIPPRPPC-YCFVEFENTRDAE 59
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ GY F D +LR++ A
Sbjct: 60 DAIRGRDGYNF-----DGCRLRVELA 80
>gi|108708089|gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
gi|215692748|dbj|BAG88168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192809|gb|EEC75236.1| hypothetical protein OsI_11526 [Oryza sativa Indica Group]
gi|222624911|gb|EEE59043.1| hypothetical protein OsJ_10806 [Oryza sativa Japonica Group]
Length = 286
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S T++V LP D REV +F YK R+V + + P P FV+F P A
Sbjct: 6 SRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-YAFVEFEDPRDAE 59
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGG 227
A GY FD H +LR++ A G R GG
Sbjct: 60 EACAGRDGYNFDGH-----RLRVEPAH--GGRGNGG 88
>gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa Japonica
Group]
Length = 145
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S T++V LP D REV +F YK R+V + + P P FV+F P A
Sbjct: 6 SRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-YAFVEFEDPRDAQ 59
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ GY FD H +LR++ A
Sbjct: 60 DAIYGRHGYDFDGH-----RLRVELA 80
>gi|15231285|ref|NP_187966.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
gi|13878011|gb|AAK44083.1|AF370268_1 putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|11994559|dbj|BAB02599.1| unnamed protein product [Arabidopsis thaliana]
gi|17104623|gb|AAL34200.1| putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|332641854|gb|AEE75375.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
Length = 262
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 13/104 (12%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P + GG R D ++L V L DC + + + RPF
Sbjct: 11 PRGYGRRGRSPSPRGR-----FGGSRDS-----DLPTSLLVRNLRHDCRQED---LRRPF 57
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGY 200
+ V+ + + GDP F+ F+ PA AA A + GY
Sbjct: 58 EQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGY 101
>gi|240254274|ref|NP_001031195.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195102|gb|AEE33223.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 220
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P G GGRS D ++L V L DC + ++ F F
Sbjct: 11 PRGYGRRGRSPSPR------GRYGGRSR-----DLPTSLLVRNLRHDCRQEDLRKSFEQF 59
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGY 200
K++ L + GDP FV F+ PA AA A + GY
Sbjct: 60 GPVKDIYLPRD---YYTGDPRGFGFVQFMDPADAADAKHHMDGY 100
>gi|115463447|ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa Japonica Group]
Length = 294
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S T++V LP D REV +F YK R+V + + P P FV+F P A
Sbjct: 6 SRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-YAFVEFEDPRDAQ 59
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ GY FD H +LR++ A
Sbjct: 60 DAIYGRHGYDFDGH-----RLRVELA 80
>gi|367015674|ref|XP_003682336.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
gi|359749998|emb|CCE93125.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
Length = 855
Score = 40.4 bits (93), Expect = 0.63, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+ V+ LP + +R+++ +F F K VR+ K + G FV+F+ P A AM
Sbjct: 730 IIVKNLPFEATRKDIFELFSSFGHLKSVRVPKKFDKSARG----FAFVEFLLPKEAENAM 785
Query: 195 DALQG 199
D LQG
Sbjct: 786 DQLQG 790
>gi|342882619|gb|EGU83235.1| hypothetical protein FOXB_06235 [Fusarium oxysporum Fo5176]
Length = 454
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + E+ +F GYK + +K G P +CFV+F A+
Sbjct: 297 NTLYVGNLPMDTAEEELKTLFSKQRGYKRLCFRTK-----GNGP--MCFVEFEDIPFASK 349
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP 220
A+ L G ++ + RL F++ P
Sbjct: 350 ALTELYGKLLSNSNKGGI--RLSFSKNP 375
>gi|357464165|ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
gi|355491412|gb|AES72615.1| RNA-binding protein [Medicago truncatula]
Length = 380
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 112 KDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
KD +LGL + + S T++V LP+D E+ +F YK R++ E +
Sbjct: 93 KDCSLGLTVQFLQSNMSSRFSRTIYVGNLPADIRESEIEDLF-----YKYGRIMEIELKV 147
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFA 217
P P CFV+F + A A+ GY F D +LR++ A
Sbjct: 148 PPRPP-CYCFVEFDNARDAEDAIRGRDGYNF-----DGCRLRVELA 187
>gi|313236302|emb|CBY11622.1| unnamed protein product [Oikopleura dioica]
Length = 161
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++T++VE LP + + + +F F G+K+ R V P G FV+F A
Sbjct: 87 AATIYVENLPDEANESMLNLLFSQFPGFKKSRPV------PSGGK---AFVEFADAGAAT 137
Query: 192 TAMDALQGYR 201
+A DALQG++
Sbjct: 138 SAKDALQGFK 147
>gi|331218892|ref|XP_003322123.1| hypothetical protein PGTG_03660 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301113|gb|EFP77704.1| hypothetical protein PGTG_03660 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 311
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 12/89 (13%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D + LF+EGLP++ + +A +F+ + G++ VRLV PG + FV + + A
Sbjct: 233 DPNPVLFLEGLPAEVTDDMMAVLFQQYPGFQSVRLV------PGRTG--IAFVQYDTAAQ 284
Query: 190 AATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ A AL G++ V +++ FAR
Sbjct: 285 SDMAKAALDGFKL----APGVVMKVSFAR 309
>gi|170103054|ref|XP_001882742.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642113|gb|EDR06370.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 243
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP ++ ++ +F + EVRL+ + + FV+++
Sbjct: 165 LPPN--KILFLQNLPESVTKEQLLGLFSQYPNLYEVRLIPTKRD--------IAFVEYMD 214
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A DAL ++ D + K+++ +AR
Sbjct: 215 EGSAGVAKDALHNFKLDGEN----KIKITYAR 242
>gi|18858877|ref|NP_570984.1| ELAV-like protein 1 [Danio rerio]
gi|6694225|gb|AAF25188.1|AF184245_1 ribonucleoprotein [Danio rerio]
Length = 322
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
P DA + L + LP + S+ E+ +F + +L+ + G L FV++V+P
Sbjct: 13 PSDAKTNLIINYLPQNMSQEELRSLFSSIGEVESAKLIRDKM---AGHSLGYGFVNYVNP 69
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
+ A A++ L G R S +++ +AR
Sbjct: 70 SDAERAINTLNGLRL-----QSKTIKVSYAR 95
>gi|12323160|gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidopsis thaliana]
Length = 220
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P G GGRS D ++L V L DC + ++ F F
Sbjct: 11 PRGYGRRGRSPSPR------GRYGGRSR-----DLPTSLLVRNLRHDCRQEDLRKSFEQF 59
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGY 200
K++ L + GDP FV F+ PA AA A + GY
Sbjct: 60 GPVKDIYLPRD---YYTGDPRGFGFVQFMDPADAADAKHHMDGY 100
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T++V LPSD +E+ IF Y E+R + +SR D F+ F A A
Sbjct: 5 TVYVGNLPSDVREKEIEDIFH---KYGEIRNIDIKSR--SRDSPAFAFIQFDDRRDAKEA 59
Query: 194 MDALQGYRFDEHDRDSVKLRLQF 216
+ A GY FD +LR++F
Sbjct: 60 VRARDGYEFD-----GKRLRVEF 77
>gi|451993063|gb|EMD85538.1| hypothetical protein COCHEDRAFT_1187995 [Cochliobolus
heterostrophus C5]
Length = 828
Score = 40.0 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 124 EVPLPPDA-SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
++P P ++TL+V L S + F+P G++ ++ +K G + FV
Sbjct: 594 DIPEPEATNTATLYVRNLNFSTSTERLTEAFKPLSGFRSAKVKTKVDPKRGVLSMGFGFV 653
Query: 183 DFVSPAHAATAMDALQGYRFDEH 205
+F SP A A+ A+ GY + H
Sbjct: 654 EFNSPETATAALRAMDGYDLEGH 676
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 126 PLPPD-----ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLIL 179
PL P+ S LFV LP C E+ +F F E+ + + E++ P G
Sbjct: 527 PLRPEDEDIGESGRLFVRNLPYACREDELRELFEAFGPLSELHMPIDGETKKPKG----F 582
Query: 180 CFVDFVSPAHAATAMDALQGYRF 202
F+ FV P HA+ A L F
Sbjct: 583 AFITFVLPEHASQAFQNLDNTIF 605
>gi|365757846|gb|EHM99718.1| Mrd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 879
Score = 40.0 bits (92), Expect = 0.68, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 754 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 809
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 810 NAMDQLHG 817
>gi|358334265|dbj|GAA52697.1| serine dehydratase-like, partial [Clonorchis sinensis]
Length = 1541
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+ L + LP + ++ +F ++ +L+ ++ G L FVDFV+P HAA
Sbjct: 654 TNLIINYLPQSYDQNDLQRLFERVGPIRQCKLIRDKNT---GASLCYGFVDFVNPQHAAL 710
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHR 229
A+ GY ++ +LR+ +A G R HR
Sbjct: 711 AIQMYHGYETEQK-----RLRVAYASSGGRRFTPSHR 742
>gi|9843661|emb|CAC03604.1| SC35-like splicing factor SCL30a, 30a kD [Arabidopsis thaliana]
Length = 261
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 13/104 (12%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P + GG R D ++L V L DC + + + RPF
Sbjct: 11 PRGYGRRGRSPSPRGR-----FGGSRDS-----DLPTSLLVRNLRHDCRQED---LRRPF 57
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGY 200
+ V+ + + GDP F+ F+ PA AA A + GY
Sbjct: 58 EQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGY 101
>gi|323352890|gb|EGA85192.1| Whi3p [Saccharomyces cerevisiae VL3]
Length = 629
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGYRFDEHDRDSVK----LRLQFARYP 220
A+ L G + R +V +RL F++ P
Sbjct: 598 ALAELYGRQL---PRSTVSSKGGIRLSFSKKP 626
>gi|357467717|ref|XP_003604143.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355505198|gb|AES86340.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 309
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T+F+ GLP D RE+ ++ R G++ +L K + G F F SP A A
Sbjct: 37 TIFITGLPEDVKERELQNLCRWLPGFEASQLNFKAEKPMG-------FALFNSPHQAIAA 89
Query: 194 MDALQGYRFD 203
D LQ FD
Sbjct: 90 KDILQDMLFD 99
>gi|401411093|ref|XP_003884994.1| putative small nuclear ribonucleoprotein U1A [Neospora caninum
Liverpool]
gi|325119413|emb|CBZ54966.1| putative small nuclear ribonucleoprotein U1A [Neospora caninum
Liverpool]
Length = 399
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 14/92 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
P + LF+E LP D + + +F G EVR V + FV++ +
Sbjct: 321 FPAMPNKVLFLENLPEDATMEGLISLFSKHAGMVEVRPVLWRR---------VAFVEYEN 371
Query: 187 PAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
AA AM+ALQG H + +++ +AR
Sbjct: 372 EMLAANAMNALQG-----HQMNGSPIKITYAR 398
>gi|388516627|gb|AFK46375.1| unknown [Medicago truncatula]
Length = 314
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T+F+ GLP D RE+ ++ R G++ +L K + G F F SP A A
Sbjct: 37 TIFITGLPEDVKERELQNLCRWLPGFEASQLNFKAEKPMG-------FALFNSPHQAIAA 89
Query: 194 MDALQGYRFD 203
D LQ FD
Sbjct: 90 KDILQDMLFD 99
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+TLF+ L + + EV +F G+K+++++ +E RH +CF++F A
Sbjct: 209 CNTLFIGNLGENINEEEVRGLFSVQPGFKQMKIIRQE-RH------TVCFIEFEDVNSAT 261
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFARYP-GARSGGGH 228
LQG S+ +R+Q+++ P G R G +
Sbjct: 262 NVHHNLQGAVIP--SSGSIGMRIQYSKNPFGKREDGTY 297
>gi|357017693|gb|AET50875.1| hypothetical protein [Eimeria tenella]
Length = 415
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL----VSKESRHPGGDPLILCFVDFVSP 187
+ TL++ LP C E+ IF K+ R+ VS+ESR F+ FV P
Sbjct: 105 TDTLYISNLPLRCGALELRRIFEEVGEVKDCRIVNNPVSRESRG-------FAFLSFVDP 157
Query: 188 AHAATAMDAL 197
+HAA A++
Sbjct: 158 SHAAVAIEHF 167
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S T++V LP D REV +F YK R+V + + P P FV+F P A
Sbjct: 6 SRTIYVGNLPGDIREREVEDLF-----YKYGRIVEIDLKVPPRPPG-FAFVEFEDPRDAE 59
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ GY FD + +LR++ A
Sbjct: 60 DAIQGRDGYNFDGN-----RLRVELA 80
>gi|357467715|ref|XP_003604142.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355505197|gb|AES86339.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 311
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T+F+ GLP D RE+ ++ R G++ +L K + G F F SP A A
Sbjct: 37 TIFITGLPEDVKERELQNLCRWLPGFEASQLNFKAEKPMG-------FALFNSPHQAIAA 89
Query: 194 MDALQGYRFD 203
D LQ FD
Sbjct: 90 KDILQDMLFD 99
>gi|401416828|ref|XP_003872908.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489134|emb|CBZ24386.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 819
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE---SRHPGGDPLIL 179
S+VP P L V+ LP + + ++V +F F + VR+ K S H +
Sbjct: 724 SKVP-PGSDPQKLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHAFSSHRENNHRGF 782
Query: 180 CFVDFVSPAHAATAMDALQG-YRFDEHDRDSVKLRLQFARYPG 221
FV+F+S A AA A++ L+ + + H L LQ+A+ G
Sbjct: 783 AFVEFLSEAEAARALETLKATHLYGRH------LVLQYAKLDG 819
>gi|356521751|ref|XP_003529515.1| PREDICTED: uncharacterized protein LOC100797865 [Glycine max]
Length = 320
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T+F+ GLP D RE+ ++ R G++ +L K + G F F +P A A
Sbjct: 40 TIFITGLPEDVKERELQNLLRWLPGFEASQLNFKAEKPMG-------FALFSAPHQALAA 92
Query: 194 MDALQGYRFD 203
D LQ FD
Sbjct: 93 KDILQDMLFD 102
>gi|9280223|dbj|BAB01713.1| unnamed protein product [Arabidopsis thaliana]
Length = 317
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
P D T+F+ GLP D RE+ ++ R GY E V+ + P G F F +
Sbjct: 54 PYDELRTIFIAGLPDDVKERELLNLLRWLPGY-EASQVNFKGEKPMG------FALFSTA 106
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRL 214
A A D LQ FD + + +
Sbjct: 107 QFAMAAKDTLQHMVFDAESKSVIHTEM 133
>gi|453089327|gb|EMF17367.1| hypothetical protein SEPMUDRAFT_146408 [Mycosphaerella populorum
SO2202]
Length = 393
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 71/200 (35%), Gaps = 27/200 (13%)
Query: 12 RQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSA 71
R P A P PR Y E SSY D++ + + D L
Sbjct: 4 RAPFPADPDDFDSDPRISY----SKENSSYLLEDENGDEWEWLAGPSKWSKTMDEALMKQ 59
Query: 72 QISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPG-PSAKDRALGLGGGRSEVPLPPD 130
Q Y ++G P DP D P+ K +A G S P
Sbjct: 60 QAEIY-------KVAGVDDEAPALDPMKKRKANQDDSEPNKKAKASASGPATSSAPR--- 109
Query: 131 ASSTLFVEGLPSDCSRREVAHIFR--------PFVGYKEVRLVSKESRHPGGDPLILCFV 182
S+ +FV GLPSD EV F+ P K ++L + + + G+ LI+ F
Sbjct: 110 RSTAVFVSGLPSDVDVDEVRACFQRYGIIAESPDDNEKRIKLYNDKDGNFKGEALIIYF- 168
Query: 183 DFVSPAHAATAMDALQGYRF 202
P A A++ GY F
Sbjct: 169 ---RPESVAMAINMQDGYEF 185
>gi|432105098|gb|ELK31467.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Myotis
davidii]
Length = 1010
Score = 40.0 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ S + A+ A+
Sbjct: 850 LFISGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYESESQASQAV 905
Query: 195 DALQGYRFDEH 205
+ G E+
Sbjct: 906 MKMDGMTIKEN 916
>gi|323449244|gb|EGB05134.1| hypothetical protein AURANDRAFT_1296 [Aureococcus anophagefferens]
Length = 464
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFVSPAH 189
A + L+V LP D S E+ F P EV +SKE+R P G FV FV P
Sbjct: 12 AGARLYVANLPYDASEEEILAYFSPHGTVSEVHQPLSKETRAPLG----FAFVTFVLPTA 67
Query: 190 AATAMDALQGYRF 202
A A +L G F
Sbjct: 68 AEAATASLDGASF 80
>gi|281202145|gb|EFA76350.1| U2 small nuclear ribonucleoprotein B [Polysphondylium pallidum
PN500]
Length = 246
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 10/74 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LFVE LP C + +F F G++ + + + + + FV+F
Sbjct: 169 PPN--KILFVENLPEQCEEMMLNMLFSQFPGFQGISMTTAKKG--------VAFVEFDDD 218
Query: 188 AHAATAMDALQGYR 201
+ +A AM LQG++
Sbjct: 219 SKSAVAMTHLQGFK 232
>gi|399218844|emb|CCF75731.1| unnamed protein product [Babesia microti strain RI]
Length = 199
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
P T+FVE LP D ++R V +F + GY R + + FVD+
Sbjct: 122 PQDVHTIFVENLPPDTTQRAVEILFSQYPGYVGCRFILDRG---------VAFVDYEKSV 172
Query: 189 HAATAMDALQGYRF 202
A + LQG+R
Sbjct: 173 QAEVTIQGLQGFRI 186
>gi|357616005|gb|EHJ69949.1| hypothetical protein KGM_10362 [Danaus plexippus]
Length = 888
Score = 40.0 bits (92), Expect = 0.76, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 22/117 (18%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK----ESRHPGGDPLILCFVDFVSPA 188
+ + + +P +R+E+ IFR F K +RL K +H G FVD+ S A
Sbjct: 764 TKILIRNVPFQANRKELHEIFRAFGEIKTLRLPQKLTVGSEQHRG-----FAFVDYYSKA 818
Query: 189 HAATAMDA------LQGYRF-------DEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
A +A DA L G R + + D LR + A A+S GG + ++
Sbjct: 819 DAKSAFDALCQSTHLYGRRLVLEWADQSDENEDIDLLRKRTAEKFNAKSPGGKKSRK 875
>gi|384252888|gb|EIE26363.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 343
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
+FV LP D RE+ +F YK R+ + + + P P FV+F P+HA A
Sbjct: 7 VIFVGNLPGDVREREIEDLF-----YKYGRIRNIDLKLPPR-PPAFAFVEFEKPSHAEDA 60
Query: 194 MDALQGYRFDEH 205
+ GY FD +
Sbjct: 61 VKGRDGYVFDNN 72
>gi|150865889|ref|XP_001385283.2| Protein involved in regulation of cell size putative RNA binding
protein [Scheffersomyces stipitis CBS 6054]
gi|149387145|gb|ABN67254.2| Protein involved in regulation of cell size putative RNA binding
protein [Scheffersomyces stipitis CBS 6054]
Length = 732
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE-----------SRHPGGDPLILCF 181
+TL+V LP D + E+ +F P G++ + +K S H G +CF
Sbjct: 587 NTLYVGNLPPDATEAELRALFSPQKGFRRLSFRTKNQSSGTSGSSGTSGHNHGP---MCF 643
Query: 182 VDFVSPAHAATAMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSGGGHR 229
V+F AHA A+ L G + + K +RL F++ P G R G R
Sbjct: 644 VEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSFSKNPLGVRGPGNPR 694
>gi|442619719|ref|NP_732282.6| couch potato, isoform R [Drosophila melanogaster]
gi|440217574|gb|AAF55483.7| couch potato, isoform R [Drosophila melanogaster]
Length = 749
Score = 40.0 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA-AT 192
TLFV GLP D RE+ +FR + GY+ L P + FV F + A A A
Sbjct: 443 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 500
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFAR 218
D QG RFD ++ RL+FA+
Sbjct: 501 KQDLQQGVRFDPDMPQTI--RLEFAK 524
>gi|321261626|ref|XP_003195532.1| polyadenylation factor 64 kDasubunit [Cryptococcus gattii WM276]
gi|317462006|gb|ADV23745.1| Polyadenylation factor 64 kDasubunit, putative [Cryptococcus gattii
WM276]
Length = 452
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPF--VGYKEVRLVSKESRHPGGDPLILCFVDF 184
+PP+AS T+FV +P D S ++A++F V E++ + R G FV F
Sbjct: 1 MPPNASKTVFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKG-----YAFVQF 55
Query: 185 VSPAHAATAMDALQ 198
A A +A+ LQ
Sbjct: 56 YDEATALSAVRNLQ 69
>gi|451846216|gb|EMD59526.1| hypothetical protein COCSADRAFT_100727 [Cochliobolus sativus
ND90Pr]
Length = 828
Score = 40.0 bits (92), Expect = 0.78, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 124 EVPLPPDA-SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
++P P ++TL+V L S + F+P G++ ++ +K G + FV
Sbjct: 594 DIPEPEATNTATLYVRNLNFSTSTERLIEAFKPLSGFRSAKVKTKVDPKRGVLSMGFGFV 653
Query: 183 DFVSPAHAATAMDALQGYRFDEH 205
+F SP A A+ A+ GY + H
Sbjct: 654 EFNSPETATAALRAMDGYDLEGH 676
>gi|323338031|gb|EGA79266.1| Npl3p [Saccharomyces cerevisiae Vin13]
Length = 357
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 11/89 (12%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
+++ LFV P D E+ IF PF KEV++++ FV+F A
Sbjct: 123 SNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILNG-----------FAFVEFEEAESA 171
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFARY 219
A A++ + G F + V +L RY
Sbjct: 172 AKAIEEVHGKSFANQPLEVVYSKLPAKRY 200
>gi|320589895|gb|EFX02351.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 562
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V +P D S E+ +F GYK + + SK G P +CFV+F + A
Sbjct: 348 NTLYVGNIPMDTSEEELKALFSKQRGYKRLSVRSK-----GNGP--MCFVEFEDISFATK 400
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARS 224
+ L G R + RL F++ P G RS
Sbjct: 401 TLYELYGAALRGSTRGGI--RLSFSKNPLGVRS 431
>gi|194763797|ref|XP_001964019.1| GF20948 [Drosophila ananassae]
gi|190618944|gb|EDV34468.1| GF20948 [Drosophila ananassae]
Length = 857
Score = 40.0 bits (92), Expect = 0.79, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ +FV L C++ E+ +F PF K+VRLV K ++ G + +V+F PA A
Sbjct: 683 TNKIFVRNLYPACTKEELQELFSPFGNIKDVRLVHKLNKQLKG----IAYVEFELPAEAQ 738
Query: 192 TAMDALQG 199
A+ G
Sbjct: 739 KAVAGRDG 746
>gi|366995467|ref|XP_003677497.1| hypothetical protein NCAS_0G02580 [Naumovozyma castellii CBS 4309]
gi|342303366|emb|CCC71145.1| hypothetical protein NCAS_0G02580 [Naumovozyma castellii CBS 4309]
Length = 224
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE----SRHPGGDPLILCFVDFVSP 187
SS L+V LP RE++ F F KEVRL + SRH G F++F +
Sbjct: 93 SSILYVSRLPQGFHERELSKYFSQFGDLKEVRLARNKKTGNSRHYG-------FIEFANK 145
Query: 188 AHAATAMDALQGY 200
A A DA+ Y
Sbjct: 146 DDANIAQDAMNNY 158
>gi|169611634|ref|XP_001799235.1| hypothetical protein SNOG_08932 [Phaeosphaeria nodorum SN15]
gi|160702333|gb|EAT84100.2| hypothetical protein SNOG_08932 [Phaeosphaeria nodorum SN15]
Length = 204
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LF++ +P D ++ ++F F G+KEVRLVS + + F +F + A
Sbjct: 129 NKVLFLQNIPRDIDEEDLTNVFDRFEGFKEVRLVSVRA---------VAFAEFENEQFAI 179
Query: 192 TAMDA 196
TA +A
Sbjct: 180 TAKEA 184
>gi|255568059|ref|XP_002525006.1| RNA-binding protein with multiple splicing, putative [Ricinus
communis]
gi|223535714|gb|EEF37378.1| RNA-binding protein with multiple splicing, putative [Ricinus
communis]
Length = 337
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLF+ L + + E+ +F G+K+++++ +E RH +CF++F A+
Sbjct: 233 NTLFIGNLGENINEDELRGLFSVQPGFKQMKVLRQE-RH------TVCFIEFEDVNSASN 285
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFARYP-GARSGGGH 228
+LQG SV +R+Q+++ P G R G H
Sbjct: 286 VHRSLQGAVIP--SSGSVGMRIQYSKNPFGKRKDGSH 320
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D T+F+ GLP D RE+ ++ R GY E V+ + P G F F +
Sbjct: 56 DEVRTIFITGLPEDVKERELQNLLRWLPGY-EASQVNYKGEKPMG------FALFSTSQF 108
Query: 190 AATAMDALQGYRFDEHDRDSVKLRL 214
A A +ALQ FD + + +
Sbjct: 109 AIAAKEALQDMLFDAESKSILHTEM 133
>gi|50555840|ref|XP_505328.1| YALI0F12375p [Yarrowia lipolytica]
gi|49651198|emb|CAG78135.1| YALI0F12375p [Yarrowia lipolytica CLIB122]
Length = 625
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP + + E+ +F GYK + +K + +CFV+F + +A+
Sbjct: 514 NTLYVGNLPMNTTEEELMQLFSKQKGYKRLCFRTKMNGP-------MCFVEFENVMYASK 566
Query: 193 AMDALQGYRFDEHDRDSVK--LRLQFARYP 220
A++ L G + SVK +RL F++ P
Sbjct: 567 ALNELYGKGL----KYSVKGGIRLSFSKNP 592
>gi|294658856|ref|XP_461195.2| DEHA2F19514p [Debaryomyces hansenii CBS767]
gi|202953439|emb|CAG89583.2| DEHA2F19514p [Debaryomyces hansenii CBS767]
Length = 529
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 9/106 (8%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI------LCFVDFVS 186
+TL+V LP D + E+ +F P G++ + +K + +CFV+F
Sbjct: 393 NTLYVGNLPPDATESELRALFSPQKGFRRLSFRTKNQSSSNPNQSSNHNHGPMCFVEFED 452
Query: 187 PAHAATAMDALQGYRFDEHDRDSVK--LRLQFARYP-GARSGGGHR 229
AHA A+ L G + K +RL F++ P G R G R
Sbjct: 453 VAHATRALAELYGRTLPRSGGSNGKGGIRLSFSKNPLGVRGPGNPR 498
>gi|291407986|ref|XP_002720309.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
Length = 343
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
R+ + P ++V LP D REV +F + ++V L ++ P F
Sbjct: 4 RAVIRGPLGNDCRIYVGNLPPDIGTREVKDMFYKYGTVRDVDLKNRRWGRP------FAF 57
Query: 182 VDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSGGG 227
V+F SP A A+ GY D + +LR++F R A GGG
Sbjct: 58 VEFNSPRDAHNAVHGRDGY-----DYEGYRLRVEFPRNYRAIYGGG 98
>gi|242094708|ref|XP_002437844.1| hypothetical protein SORBIDRAFT_10g003600 [Sorghum bicolor]
gi|241916067|gb|EER89211.1| hypothetical protein SORBIDRAFT_10g003600 [Sorghum bicolor]
Length = 826
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ ++F + L + G ++ FV F + A +A
Sbjct: 34 TLFVAGLPDDVKPREIHNLFSHRPAFDHCLL-----EYTGRANQVVAFVTFFTHEAALSA 88
Query: 194 MDALQGYRFDEHDRDSVKLRLQFARYPGARSGGG 227
M +L G FD +L ++ A+ R GG
Sbjct: 89 MTSLNGTIFDPE--TGYRLHIELAKSTSRRPRGG 120
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G +S +PP STLF+ L C++ E+ + G+ +++ R GG P+
Sbjct: 206 GRDKSSNDIPP--CSTLFIANLGDTCTKDELNEVLSKEPGFDVLKM-----RRRGGMPV- 257
Query: 179 LCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFA 217
F DF + AM++LQG D D + + + +
Sbjct: 258 -AFADFTDIESSTAAMNSLQGTVLASSDSDGLHIESELS 295
>gi|74192738|dbj|BAE34886.1| unnamed protein product [Mus musculus]
Length = 222
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
++V LPSD R++ +F + +E+ L ++ P FV F P A A+
Sbjct: 17 IYVGNLPSDVRERDLEDLFYKYGRIREIELKNRHGLVP------FAFVRFEDPRDAEDAI 70
Query: 195 DALQGYRFDEHDRDSVKLRLQFARYPGARSGGGHRGKR 232
GY D +LR++F R G R GG RG R
Sbjct: 71 YGRNGY-----DYGQCRLRVEFPRTYGGR-GGWPRGAR 102
>gi|58271580|ref|XP_572946.1| polyadenylation factor 64 kDa subunit [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229205|gb|AAW45639.1| polyadenylation factor 64 kDa subunit, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 455
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPF--VGYKEVRLVSKESRHPGGDPLILCFVDF 184
+PP+AS T+FV +P D S ++A++F V E++ + R G FV F
Sbjct: 1 MPPNASKTVFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKG-----YAFVQF 55
Query: 185 VSPAHAATAMDALQ 198
A A +A+ LQ
Sbjct: 56 YDEATALSAVRNLQ 69
>gi|351712152|gb|EHB15071.1| U1 small nuclear ribonucleoprotein A [Heterocephalus glaber]
Length = 272
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 15/91 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ F F G++E RLV RH + FV+F
Sbjct: 169 PPN--HILFLTNLPEETNELMLSMPFNQFPGFQEARLVP--GRH------DIAFVEF-DE 217
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A A +ALQGY+ +++ +++ FA+
Sbjct: 218 VQAGAAREALQGYKITQNN----AMKISFAK 244
>gi|413942879|gb|AFW75528.1| hypothetical protein ZEAMMB73_795624, partial [Zea mays]
Length = 210
Score = 39.7 bits (91), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G +S +PP ST+F+ L C+ E+ + G+ +++ R GG P+
Sbjct: 116 GRDKSSSDIPP--CSTIFIANLGHTCTEDELKEVLSKEPGFHVLKM-----RRRGGMPV- 167
Query: 179 LCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
F DF + AM+ LQG D D L +++AR
Sbjct: 168 -AFADFTDIESSTAAMNRLQGTVLASSDNDG--LHIEYAR 204
>gi|195501252|ref|XP_002097723.1| GE24318 [Drosophila yakuba]
gi|194183824|gb|EDW97435.1| GE24318 [Drosophila yakuba]
Length = 256
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 17/101 (16%)
Query: 126 PLPPDAS-------STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHP-GGDPL 177
P+PP + + L + LP D + EV +F F ++ +++ RH G
Sbjct: 26 PVPPLINNAYSRGQTNLILNYLPQDMTELEVHRLFSKFGEIRKAKII----RHRRTGISC 81
Query: 178 ILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
FVD+VSP AA A +++ GY + +L++ FAR
Sbjct: 82 CYGFVDYVSPRQAAAAQESMDGY-----ETRGKRLKVAFAR 117
>gi|70990768|ref|XP_750233.1| pre-rRNA processing protein Mrd1 [Aspergillus fumigatus Af293]
gi|74669789|sp|Q4WJT7.1|MRD1_ASPFU RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|66847865|gb|EAL88195.1| pre-rRNA processing protein Mrd1, putative [Aspergillus fumigatus
Af293]
Length = 825
Score = 39.7 bits (91), Expect = 0.88, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVS 186
P +STLFV+ L + +F+P G+ R+ +K + + PG + FVDF +
Sbjct: 593 PVVTSTLFVKNLNFSTTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFRT 652
Query: 187 PAHAATAMDALQGYRFDEHD 206
A A A+ A+ GY+ D+H+
Sbjct: 653 KAQAQAALAAMDGYKLDQHE 672
>gi|449018190|dbj|BAM81592.1| probable RNA binding protein Mrd1p [Cyanidioschyzon merolae strain
10D]
Length = 815
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 123 SEVPLPPDA--SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
SE + P+A + L ++ + + S+RE+ +F F K +RL K G C
Sbjct: 726 SETAVVPEAGNETKLIIKNIAFEASKRELHQLFSSFGHVKSLRLPKK----VDGSGRGFC 781
Query: 181 FVDFVSPAHAATAMDALQGYRF 202
FV++ +P A A +QG F
Sbjct: 782 FVEYATPQETARATALVQGTHF 803
>gi|9294016|dbj|BAB01919.1| unnamed protein product [Arabidopsis thaliana]
Length = 271
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A STLF+ L +C+ E+ + + G+ +++ R GG P + F DF A
Sbjct: 178 ACSTLFIANLGPNCTEDELKQLLSRYPGFHILKI-----RARGGMP--VAFADFEEIEQA 230
Query: 191 ATAMDALQGYRFDEHDR 207
AM+ LQG DR
Sbjct: 231 TDAMNHLQGNLLSSSDR 247
>gi|134114518|ref|XP_774089.1| hypothetical protein CNBH0140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256721|gb|EAL19442.1| hypothetical protein CNBH0140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 455
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPF--VGYKEVRLVSKESRHPGGDPLILCFVDF 184
+PP+AS T+FV +P D S ++A++F V E++ + R G FV F
Sbjct: 1 MPPNASKTVFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKG-----YAFVQF 55
Query: 185 VSPAHAATAMDALQ 198
A A +A+ LQ
Sbjct: 56 YDEATALSAVRNLQ 69
>gi|159130709|gb|EDP55822.1| pre-rRNA processing protein Mrd1, putative [Aspergillus fumigatus
A1163]
Length = 825
Score = 39.7 bits (91), Expect = 0.89, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVS 186
P +STLFV+ L + +F+P G+ R+ +K + + PG + FVDF +
Sbjct: 593 PVVTSTLFVKNLNFSTTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFRT 652
Query: 187 PAHAATAMDALQGYRFDEHD 206
A A A+ A+ GY+ D+H+
Sbjct: 653 KAQAQAALAAMDGYKLDQHE 672
>gi|389583186|dbj|GAB65922.1| U2 small nuclear ribonucleoprotein B'' [Plasmodium cynomolgi strain
B]
Length = 262
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLF++ LP++ ++ + +F + G+ EVR + PG + + FVDF S + A
Sbjct: 191 TLFIQNLPNEINKNALEILFNQYPGFCEVRHI------PGRN---VAFVDFSSYQNGEVA 241
Query: 194 MDALQGYR 201
M+ LQ ++
Sbjct: 242 MNGLQSFK 249
>gi|156054690|ref|XP_001593271.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980]
gi|154703973|gb|EDO03712.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 842
Score = 39.7 bits (91), Expect = 0.90, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Query: 86 SGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCS 145
+G PS+PV DP S D L G V ++TLFV L +
Sbjct: 573 TGPAPSQPVATIDRNAGKAADPKFSTSD-LLERESGAENVD-----TTTLFVRNLNFSTT 626
Query: 146 RREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL--CFVDFVSPAHAATAMDALQGYRFD 203
+ + +F+P G+ R+ +K G L + F++F + + A A+ A+ GY D
Sbjct: 627 SQRLTEVFKPLDGFLSARVNTKTDPKKPGQVLSMGFGFIEFRTKSQAQAAIKAMDGYTLD 686
Query: 204 EH 205
H
Sbjct: 687 NH 688
>gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|334185842|ref|NP_001190041.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|124301106|gb|ABN04805.1| At3g49430 [Arabidopsis thaliana]
gi|332645020|gb|AEE78541.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645022|gb|AEE78543.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 300
Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S +++V LP D E+ IF YK R+V E + P P CFV+F H+
Sbjct: 6 SRSIYVGNLPGDIREHEIEDIF-----YKYGRIVDIELKVPPRPPC-YCFVEF---EHSR 56
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A DA++G D ++ D +LR++ A
Sbjct: 57 DAEDAIKGR--DGYNLDGCRLRVELA 80
>gi|222631305|gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
Length = 305
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S T++V LP D REV +F YK R+V + + P P FV+F P A
Sbjct: 6 SRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-YAFVEFEDPRDAQ 59
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ GY FD H +LR++ A
Sbjct: 60 DAIYGRHGYDFDGH-----RLRVELA 80
>gi|224100531|ref|XP_002311913.1| predicted protein [Populus trichocarpa]
gi|222851733|gb|EEE89280.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T+F+ G P D RE+ ++ R GY+ ++ K + G F F S HA A
Sbjct: 56 TIFITGFPDDVKERELQNLLRWLPGYEASQVNYKGDKAMG-------FALFSSSQHAIAA 108
Query: 194 MDALQGYRFDEHDRDSVKLRL 214
D+LQ FD + + +
Sbjct: 109 KDSLQDMVFDVETKSVLHTEM 129
>gi|219363191|ref|NP_001137034.1| uncharacterized protein LOC100217203 [Zea mays]
gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
gi|194693886|gb|ACF81027.1| unknown [Zea mays]
gi|194698082|gb|ACF83125.1| unknown [Zea mays]
gi|413955774|gb|AFW88423.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 1 [Zea mays]
gi|413955775|gb|AFW88424.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 2 [Zea mays]
Length = 285
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S T++V LP D REV +F YK ++V + + P P FV+F P A
Sbjct: 6 SRTIYVGNLPGDIREREVEDLF-----YKYGKIVDIDLKVPPRPPG-YAFVEFEDPRDAE 59
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ GY FD H +LR++ A
Sbjct: 60 EAIAGRDGYNFDGH-----RLRVEAA 80
>gi|297724471|ref|NP_001174599.1| Os06g0148000 [Oryza sativa Japonica Group]
gi|55297048|dbj|BAD68617.1| unknown protein [Oryza sativa Japonica Group]
gi|55297147|dbj|BAD68790.1| unknown protein [Oryza sativa Japonica Group]
gi|215765432|dbj|BAG87129.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676715|dbj|BAH93327.1| Os06g0148000 [Oryza sativa Japonica Group]
Length = 150
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIF 153
D S+ LFV+GLP+DC+RREVA I
Sbjct: 125 DESNILFVDGLPTDCTRREVARIL 148
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S T++V LP D REV +F YK R+V + + P P FV+F P A
Sbjct: 6 SRTIYVGNLPGDIREREVEDLF-----YKYGRIVEIDLKVPPRPPG-FAFVEFEDPRDAE 59
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ GY FD + +LR++ A
Sbjct: 60 DAIHGRDGYNFDGN-----RLRVELA 80
>gi|12324445|gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514 [Arabidopsis thaliana]
Length = 295
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S +++V LP D E+ IF YK R+V E + P P CFV+F H+
Sbjct: 6 SRSIYVGNLPGDIREHEIEDIF-----YKYGRIVDIELKVPPRPPC-YCFVEF---EHSR 56
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A DA++G D ++ D +LR++ A
Sbjct: 57 DAEDAIKGR--DGYNLDGCRLRVELA 80
>gi|332020337|gb|EGI60759.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Acromyrmex
echinatior]
Length = 903
Score = 39.7 bits (91), Expect = 0.96, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP ++ ++ IF+ KEVRLV+ + H G L +V++ A AA A+
Sbjct: 754 LFVKGLPLTMTKEKLEEIFKVHGDLKEVRLVTYRNGHSKG----LAYVEYHDEATAAKAL 809
Query: 195 DALQGYRFDE 204
+ G + +
Sbjct: 810 LSTDGMKIQD 819
>gi|410927510|ref|XP_003977185.1| PREDICTED: ELAV-like protein 1-like [Takifugu rubripes]
Length = 341
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 13/101 (12%)
Query: 118 LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
+GGG + DA + L V LP + S+ E+ +F + +L+ + G L
Sbjct: 25 MGGGEGK-----DAKTNLIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDK---IAGHSL 76
Query: 178 ILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFAR 218
FV++V+P+ A A++ L G R S +++ +AR
Sbjct: 77 GYGFVNYVTPSDAERAINTLNGLRL-----QSKNIKVSYAR 112
>gi|413955773|gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S T++V LP D REV +F YK ++V + + P P FV+F P A
Sbjct: 6 SRTIYVGNLPGDIREREVEDLF-----YKYGKIVDIDLKVPPRPPG-YAFVEFEDPRDAE 59
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ GY FD H +LR++ A
Sbjct: 60 EAIAGRDGYNFDGH-----RLRVEAA 80
>gi|399218146|emb|CCF75033.1| unnamed protein product [Babesia microti strain RI]
Length = 230
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A + +FV LP D + RE+ +IF F +++ + ++ + F++F A
Sbjct: 12 APACIFVGNLPEDITVREIENIFGKFGEIRDIDIKKGKT----SNYTAYAFIEFYHMRDA 67
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFA 217
A+++ GY FD++ +LR++F+
Sbjct: 68 EDAVESRDGYNFDKY-----RLRVEFS 89
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S T++V LP D REV +F YK R+V + + P P FV+F P A
Sbjct: 29 SRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-YAFVEFEDPRDAQ 82
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ GY FD H +LR++ A
Sbjct: 83 DAIYGRNGYDFDGH-----RLRVELA 103
>gi|351712556|gb|EHB15475.1| U2 small nuclear ribonucleoprotein B'' [Heterocephalus glaber]
Length = 143
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 11/68 (16%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + +F F G+KE+ LV RH + FV+F + A A
Sbjct: 74 LFLNNLPEETNE---VMLFNQFPGFKEIHLVP--GRHD------IAFVEFENDGQAGAAR 122
Query: 195 DALQGYRF 202
DALQG++
Sbjct: 123 DALQGFKI 130
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
AS T++V LP D RE+ +F YK R+V + + P P CF++F A
Sbjct: 5 ASRTIYVGNLPGDVREREIEDLF-----YKYGRIVDIDLKLPPRPPG-YCFIEFEDARDA 58
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ GY FD + +LR++ A
Sbjct: 59 EDAIRGRDGYNFDGN-----RLRVEIA 80
>gi|410977027|ref|XP_003994914.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Felis catus]
Length = 964
Score = 39.7 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV GLP C++ E+ I + K++RLV+ + P G L +V++ S + A+ A+
Sbjct: 804 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYESESQASQAV 859
Query: 195 DALQGYRFDEH 205
+ G E+
Sbjct: 860 LKMDGMTVKEN 870
>gi|291411787|ref|XP_002722167.1| PREDICTED: squamous cell carcinoma antigen recognized by T cells 3
[Oryctolagus cuniculus]
Length = 963
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A+
Sbjct: 803 LFISGLPFSCTKEELEDICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 195 DALQGYRFDEH 205
+ G E+
Sbjct: 859 MKMDGMTIREN 869
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S T++V LP D REV +F YK R+V + + P P FV+F P A
Sbjct: 6 SRTIYVGNLPGDIREREVEDLF-----YKYGRIVEIDLKVPPRPPG-FAFVEFEDPRDAE 59
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ GY FD + +LR++ A
Sbjct: 60 DAIHGRDGYNFDGN-----RLRVELA 80
>gi|410977029|ref|XP_003994915.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Felis catus]
Length = 928
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV GLP C++ E+ I + K++RLV+ + P G L +V++ S + A+ A+
Sbjct: 768 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYESESQASQAV 823
Query: 195 DALQGYRFDEH 205
+ G E+
Sbjct: 824 LKMDGMTVKEN 834
>gi|156081688|ref|XP_001608337.1| U2 small nuclear ribonucleoprotein B'' [Plasmodium vivax Sal-1]
gi|148800908|gb|EDL42313.1| U2 small nuclear ribonucleoprotein B'', putative [Plasmodium vivax]
Length = 192
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV+ LP++ ++ + +F + G+ EVR + PG + + FVDF S + A
Sbjct: 121 TLFVQNLPNEINKSALEILFSQYPGFCEVRHI------PGRN---VAFVDFSSYQNGEVA 171
Query: 194 MDALQGYR 201
M LQ ++
Sbjct: 172 MSGLQSFK 179
>gi|444708342|gb|ELW49419.1| U2 small nuclear ribonucleoprotein B'' [Tupaia chinensis]
gi|444708343|gb|ELW49420.1| U2 small nuclear ribonucleoprotein B'' [Tupaia chinensis]
Length = 130
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEVRL RH FV+F + A A
Sbjct: 75 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLAP--GRHDS------AFVEFENDGQAGAAG 126
Query: 195 DALQ 198
DALQ
Sbjct: 127 DALQ 130
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 45/109 (41%), Gaps = 14/109 (12%)
Query: 109 PSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
P A RA G RS S+TLF+ L DC+ + +F Y V VS
Sbjct: 330 PDANARANKFGDKRSA------PSNTLFIGNLSFDCTNETIQEVF---AEYGNVTRVSLP 380
Query: 169 SRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFA 217
+ G +VDF S A A++ALQG D LR+ FA
Sbjct: 381 TDRDSGALKGFGYVDFGSQEEATAALEALQG-----QDVAGRPLRVDFA 424
>gi|224113311|ref|XP_002316452.1| predicted protein [Populus trichocarpa]
gi|222865492|gb|EEF02623.1| predicted protein [Populus trichocarpa]
Length = 281
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T+F+ G P D RE+ ++ R GY+ ++ K + G F F HA A
Sbjct: 3 TIFITGFPDDVKERELQNLLRWLPGYEASQVNYKGEKAMG-------FALFSCAQHAIAA 55
Query: 194 MDALQGYRFDEHDRDSVKLRLQFAR 218
DALQ FD D SV L + A+
Sbjct: 56 KDALQDMVFDA-DTKSV-LHTEMAK 78
>gi|145343730|ref|XP_001416465.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576690|gb|ABO94758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 220
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP S+ + V+GLP + +A +F+ F GYK+ + +R G V+F +
Sbjct: 146 PP--STRIAVQGLPGATTTHMLALLFQQFSGYKDATM----TRESGDGE-----VEFDTT 194
Query: 188 AHAATAMDALQGYRFDEHDRDSVKLRLQFA 217
A+A A++ LQG+R + + L L FA
Sbjct: 195 ANAVAALNGLQGFRLNANH----SLTLSFA 220
>gi|223997072|ref|XP_002288209.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975317|gb|EED93645.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 81
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS-KESRHPGGDPLILCFVDFVSPAHA 190
+T+ V + D + ++ +F+PF V L KE+ G FV FV A
Sbjct: 2 QNTIRVTNISEDTTEADLQELFQPFGRISRVYLAKDKETMMSRG----FAFVSFVHREDA 57
Query: 191 ATAMDALQGYRFDEHDRDSVKLRLQFAR 218
A AMD LQG H D + L+L++AR
Sbjct: 58 ARAMDKLQG-----HGYDHLILKLEWAR 80
>gi|448878368|gb|AGE46147.1| arginine/serine-rich splicing factor SR30 transcript VI [Sorghum
bicolor]
Length = 237
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T++V LP D REV +F YK R+V + + P P FV+F P A A
Sbjct: 8 TIYVGNLPGDIREREVDDLF-----YKYGRIVEIDLKIPPRPPG-FAFVEFEDPHDAEDA 61
Query: 194 MDALQGYRFDEHDRDSVKLRLQFA 217
+ GY FD H +LR++ A
Sbjct: 62 IYGRDGYNFDGH-----RLRVELA 80
>gi|361128202|gb|EHL00148.1| putative U1 small nuclear ribonucleoprotein [Glarea lozoyensis
74030]
Length = 273
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LFV+ LP + + IF F G+KEVRLV PG + FV++ S
Sbjct: 194 LPPN--KILFVQNLPDEYEVNALTSIFERFEGFKEVRLV------PGRTG--IAFVEYES 243
Query: 187 PAHAATAMDALQG 199
A +A + G
Sbjct: 244 EVGAISAKENTAG 256
>gi|217069866|gb|ACJ83293.1| unknown [Medicago truncatula]
Length = 211
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G G E P ++ LF+E LP + + R + +F + G+KEVRL+ + PG
Sbjct: 148 GSGAQEAAAP---NNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAK---PG----- 196
Query: 179 LCFVDF 184
+ FVDF
Sbjct: 197 IAFVDF 202
>gi|448878366|gb|AGE46146.1| arginine/serine-rich splicing factor SR30 transcript V [Sorghum
bicolor]
Length = 278
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
T++V LP D REV +F YK R+V + + P P FV+F P A
Sbjct: 7 CTIYVGNLPGDIREREVDDLF-----YKYGRIVEIDLKIPPRPPG-FAFVEFEDPHDAED 60
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFA 217
A+ GY FD H +LR++ A
Sbjct: 61 AIYGRDGYNFDGH-----RLRVELA 80
>gi|403221223|dbj|BAM39356.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 334
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
S +FV LP R++ +F F K++ + ++ + F+DF S A
Sbjct: 13 SCVFVGNLPEKVDNRDIHDLFDKFGEIKDIDIKHGKTTNYTS----YAFIDFASVRSAED 68
Query: 193 AMDALQGYRFDEHDRDSVKLRLQFA 217
A+D+ GY +D + KLR++FA
Sbjct: 69 AVDSRDGYEYDRY-----KLRVEFA 88
>gi|359490737|ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359490739|ref|XP_003634149.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
gi|302143975|emb|CBI23080.3| unnamed protein product [Vitis vinifera]
Length = 250
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S T++V LPSD E+ +F YK R++ E + P P CFV+F + A
Sbjct: 6 SRTIYVGNLPSDIREYEIEDLF-----YKYGRILDVELKIPPRPPC-YCFVEFENSRDAE 59
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ GY F D +LR++ A
Sbjct: 60 DAIRGRDGYNF-----DGCRLRVELA 80
>gi|115620271|ref|XP_781643.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Strongylocentrotus purpuratus]
Length = 890
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV GLP + E+ F F K VR+V+ +S P G L +VDF + A A A+
Sbjct: 715 LFVSGLPRTLTTEELEKTFSKFGKLKGVRIVTFKSGVPKG----LAYVDFENEASATRAV 770
Query: 195 DALQGYRFDEH 205
L + EH
Sbjct: 771 MGLDNTQIGEH 781
>gi|432874009|ref|XP_004072427.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 2 [Oryzias latipes]
Length = 923
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+F+ GLP C++ ++ I + K+VRLV+ S P G L +V+F A+ A+
Sbjct: 763 IFISGLPLSCTKEQLEEICKQQGTVKDVRLVTYRSGRPKG----LAYVEFADETQASQAV 818
Query: 195 DALQGYRFDEH 205
+ G + H
Sbjct: 819 LKMDGVEIEGH 829
>gi|71004576|ref|XP_756954.1| hypothetical protein UM00807.1 [Ustilago maydis 521]
gi|46095668|gb|EAK80901.1| hypothetical protein UM00807.1 [Ustilago maydis 521]
Length = 314
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ +P + E+ +F + GY +V+ + PG + FV+F
Sbjct: 210 LPPN--KMLFLQNIPEGVGKGELESLFSAYPGYVDVQTI------PGKAEI--AFVEFAD 259
Query: 187 PAHAATAMDALQGYRFDEHDR 207
+ATA AL GY F D+
Sbjct: 260 IPSSATARGALNGYNFGAGDK 280
>gi|399219025|emb|CCF75912.1| unnamed protein product [Babesia microti strain RI]
Length = 227
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
PD + ++V LPS+C +RE+ F F K + G + FV+F P
Sbjct: 4 PDENGRVYVGNLPSECDQREIEEEFEKFGKIKRCDV------KRGANGSSFAFVEFEDPR 57
Query: 189 HAATAMDALQGYRF 202
A A+ GY F
Sbjct: 58 DAKDAIKEKDGYEF 71
>gi|432874007|ref|XP_004072426.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 1 [Oryzias latipes]
Length = 941
Score = 39.3 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+F+ GLP C++ ++ I + K+VRLV+ S P G L +V+F A+ A+
Sbjct: 781 IFISGLPLSCTKEQLEEICKQQGTVKDVRLVTYRSGRPKG----LAYVEFADETQASQAV 836
Query: 195 DALQGYRFDEH 205
+ G + H
Sbjct: 837 LKMDGVEIEGH 847
>gi|340960349|gb|EGS21530.1| hypothetical protein CTHT_0033900 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 250
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 108 GPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
GP K A G + LPP+ LFV+ LP D + + IF F G++EVR+V
Sbjct: 152 GPGLKSTAPGAAPVVPDEYLPPN--RILFVQNLPDDFDKDALTAIFGRFEGFREVRMV-- 207
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
PG + FV++ S A A TA + G
Sbjct: 208 ----PGRSG--IAFVEYESEAGAITAKENTAG 233
>gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 151
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S T++V LP D REV +F YK R+V + + P P FV+F P A
Sbjct: 6 SRTIYVGNLPGDIREREVEDLF-----YKYGRIVDIDLKIPPRPPG-YAFVEFEDPRDAQ 59
Query: 192 TAMDALQGYRFDEHDRDSVKLRLQFA 217
A+ GY FD H +LR++ A
Sbjct: 60 DAIYGRHGYDFDGH-----RLRVELA 80
>gi|342319729|gb|EGU11676.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]
Length = 3850
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 125 VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
+P+P + STL+V LPS + ++ F P+ V L S+ + + + F
Sbjct: 173 IPVPANPRSTLYVTQLPSSVTETDLRATFSPYGNLIRVSLRSQSA--------VFAHIVF 224
Query: 185 VSPAHAATAMDALQG 199
SP A +A++AL G
Sbjct: 225 SSPYEALSALEALDG 239
>gi|384483751|gb|EIE75931.1| hypothetical protein RO3G_00635 [Rhizopus delemar RA 99-880]
Length = 831
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC--FVDFVSP 187
D +++FV+ + + + + F+ GY+ R+ K G L + FV+F S
Sbjct: 632 DDITSIFVKNISFSTTVESLRNAFKGIPGYRSSRINVKPDPKNTGKTLSMGYGFVEFDSK 691
Query: 188 AHAATAMDALQGYRFDEH 205
++A A++A+QGY DEH
Sbjct: 692 SNAEKAINAMQGYLLDEH 709
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,251,788,128
Number of Sequences: 23463169
Number of extensions: 193803017
Number of successful extensions: 421144
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 1405
Number of HSP's that attempted gapping in prelim test: 419623
Number of HSP's gapped (non-prelim): 2085
length of query: 232
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 94
effective length of database: 9,121,278,045
effective search space: 857400136230
effective search space used: 857400136230
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)