Query 026827
Match_columns 232
No_of_seqs 80 out of 82
Neff 3.1
Searched_HMMs 29240
Date Mon Mar 25 23:11:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026827.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026827hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qg1_A Multiple PDZ domain pro 98.8 2.4E-08 8.1E-13 71.4 8.2 81 84-168 3-88 (92)
2 2vwr_A Ligand of NUMB protein 98.8 4.1E-08 1.4E-12 70.7 8.7 82 84-169 2-89 (95)
3 2jil_A GRIP1 protein, glutamat 98.7 7.3E-08 2.5E-12 69.4 8.5 82 85-170 3-93 (97)
4 1wha_A KIAA0147 protein, scrib 98.7 1.5E-07 5E-12 69.3 9.7 85 82-170 4-99 (105)
5 1n7e_A AMPA receptor interacti 98.7 9.3E-08 3.2E-12 69.2 8.4 80 85-168 5-89 (97)
6 2qkv_A Inactivation-NO-after-p 98.6 1.3E-07 4.4E-12 68.9 8.7 83 82-169 5-91 (96)
7 2iwn_A Multiple PDZ domain pro 98.6 1.4E-07 4.6E-12 67.2 8.4 81 84-168 3-92 (97)
8 2ejy_A 55 kDa erythrocyte memb 98.6 1.1E-07 3.6E-12 71.5 7.9 77 88-168 15-95 (97)
9 2la8_A Inactivation-NO-after-p 98.6 3.2E-07 1.1E-11 68.9 10.3 81 85-170 2-86 (106)
10 3i4w_A Disks large homolog 4; 98.6 1.7E-07 6E-12 68.0 8.5 84 81-168 7-94 (104)
11 2opg_A Multiple PDZ domain pro 98.6 3.1E-07 1.1E-11 66.2 9.5 82 85-170 4-91 (98)
12 2yt7_A Amyloid beta A4 precurs 98.6 4.9E-07 1.7E-11 66.4 10.6 79 87-169 11-99 (101)
13 3cbz_A Dishevelled-2; PDZ doma 98.6 2.1E-07 7.3E-12 69.4 8.8 82 85-170 5-97 (108)
14 1wf8_A Neurabin-I; PDZ domain, 98.6 1.9E-07 6.6E-12 68.9 8.1 85 82-170 6-101 (107)
15 1i16_A Interleukin 16, LCF; cy 98.6 4.2E-07 1.4E-11 70.0 10.3 84 82-169 26-118 (130)
16 1m5z_A GRIP, AMPA receptor int 98.6 3.5E-07 1.2E-11 65.2 9.1 81 83-168 4-90 (91)
17 3b76_A E3 ubiquitin-protein li 98.6 2.5E-07 8.6E-12 71.0 8.9 93 73-169 12-113 (118)
18 2dmz_A INAD-like protein; PDZ 98.6 2.9E-07 1E-11 69.9 9.2 85 82-170 12-107 (129)
19 2i1n_A Discs, large homolog 3; 98.6 3.9E-07 1.3E-11 66.3 9.5 84 84-171 3-96 (102)
20 1wi2_A Riken cDNA 2700099C19; 98.6 4.5E-07 1.6E-11 66.7 9.9 85 82-172 12-102 (104)
21 1kwa_A Hcask/LIN-2 protein; PD 98.6 1.2E-07 4E-12 68.5 6.5 76 88-169 4-85 (88)
22 1q7x_A PDZ2B domain of PTP-BAS 98.6 3E-07 1E-11 67.7 8.8 85 82-170 6-103 (108)
23 1va8_A Maguk P55 subfamily mem 98.6 2.9E-07 1E-11 69.0 8.6 78 86-168 26-107 (113)
24 1uhp_A Hypothetical protein KI 98.5 4.6E-07 1.6E-11 66.8 9.4 86 82-171 5-103 (107)
25 2fcf_A Multiple PDZ domain pro 98.5 4E-07 1.4E-11 66.2 8.9 78 86-169 5-99 (103)
26 1d5g_A Human phosphatase HPTP1 98.5 5.8E-07 2E-11 64.6 9.2 81 85-169 5-93 (96)
27 2jre_A C60-1 PDZ domain peptid 98.5 4.2E-07 1.4E-11 66.7 8.6 84 82-169 9-104 (108)
28 2d92_A INAD-like protein; PDZ 98.5 3.5E-07 1.2E-11 67.9 7.9 82 85-170 15-106 (108)
29 1ueq_A Membrane associated gua 98.5 5.1E-07 1.7E-11 68.6 9.0 85 81-169 15-106 (123)
30 3gge_A PDZ domain-containing p 98.5 3.3E-07 1.1E-11 70.4 7.9 81 85-169 5-90 (95)
31 1v62_A KIAA1719 protein; struc 98.5 5E-07 1.7E-11 68.3 8.8 81 86-170 16-103 (117)
32 2awx_A Synapse associated prot 98.5 6.1E-07 2.1E-11 66.0 8.8 82 85-170 3-94 (105)
33 2he4_A Na(+)/H(+) exchange reg 98.5 7.1E-07 2.4E-11 63.6 8.9 78 87-171 6-89 (90)
34 2pa1_A PDZ and LIM domain prot 98.5 4.7E-07 1.6E-11 64.2 7.8 75 87-168 4-84 (87)
35 2r4h_A Membrane-associated gua 98.5 6.4E-07 2.2E-11 67.1 8.8 82 83-168 22-108 (112)
36 1qav_A Alpha-1 syntrophin (res 98.5 4.5E-07 1.5E-11 64.6 7.6 80 85-168 4-89 (90)
37 2dlu_A INAD-like protein; PDZ 98.5 7.4E-07 2.5E-11 65.9 9.0 82 85-170 15-99 (111)
38 2db5_A INAD-like protein; PDZ 98.5 4.1E-07 1.4E-11 69.2 7.6 86 84-172 24-118 (128)
39 2ehr_A INAD-like protein; PDZ 98.5 2E-06 6.7E-11 64.3 11.1 83 85-171 15-112 (117)
40 1wg6_A Hypothetical protein (r 98.5 5.2E-07 1.8E-11 69.4 8.1 83 84-170 24-123 (127)
41 2w4f_A Protein LAP4; structura 98.5 6.9E-07 2.4E-11 64.1 8.2 80 84-168 2-92 (97)
42 2o2t_A Multiple PDZ domain pro 98.5 1.9E-07 6.5E-12 69.7 5.4 83 84-169 19-110 (117)
43 2jik_A Synaptojanin-2 binding 98.5 1.2E-06 4.2E-11 63.5 9.4 81 85-169 7-97 (101)
44 1qau_A Neuronal nitric oxide s 98.4 9.9E-07 3.4E-11 65.1 9.0 80 85-170 1-88 (112)
45 2fe5_A Presynaptic protein SAP 98.4 1.1E-06 3.7E-11 62.7 8.8 80 85-168 3-92 (94)
46 2d90_A PDZ domain containing p 98.4 8.6E-07 2.9E-11 64.7 8.4 81 86-171 7-91 (102)
47 2byg_A Channel associated prot 98.4 1.1E-06 3.7E-11 66.8 8.8 80 85-168 24-113 (117)
48 2e7k_A Maguk P55 subfamily mem 98.4 3.8E-07 1.3E-11 66.2 6.1 77 87-169 8-88 (91)
49 1tp5_A Presynaptic density pro 98.4 7.9E-07 2.7E-11 66.5 8.0 87 80-170 9-99 (119)
50 2dm8_A INAD-like protein; PDZ 98.4 5E-07 1.7E-11 67.1 6.8 84 85-172 17-106 (116)
51 2q9v_A Membrane-associated gua 98.4 8.2E-07 2.8E-11 63.1 7.6 80 85-168 2-88 (90)
52 2koj_A Partitioning defective 98.4 1.3E-06 4.5E-11 64.4 9.0 83 83-169 9-101 (111)
53 1um1_A KIAA1849 protein, RSGI 98.4 1.5E-06 5E-11 64.2 9.1 80 85-168 8-95 (110)
54 1rgw_A ZAsp protein; PDZ, cyph 98.4 6E-07 2.1E-11 63.0 6.7 78 86-168 2-83 (85)
55 1x5q_A LAP4 protein; PDZ domai 98.4 2.1E-06 7.2E-11 63.4 9.9 83 81-168 11-104 (110)
56 2daz_A INAD-like protein; PDZ 98.4 1.1E-06 3.7E-11 66.7 8.4 85 82-170 22-112 (124)
57 2eno_A Synaptojanin-2-binding 98.4 1.5E-06 5.2E-11 65.4 9.1 85 82-170 14-108 (120)
58 1uep_A Membrane associated gua 98.4 9.5E-07 3.2E-11 64.9 7.7 84 82-169 6-96 (103)
59 2djt_A Unnamed protein product 98.4 5.9E-07 2E-11 65.6 6.5 81 84-168 10-97 (104)
60 2g5m_B Neurabin-2; spinophilin 98.4 7.1E-07 2.4E-11 66.2 7.1 83 84-170 3-96 (113)
61 2eeh_A PDZ domain-containing p 98.4 1.3E-06 4.4E-11 63.7 8.2 77 87-169 12-94 (100)
62 1mfg_A ERB-B2 interacting prot 98.4 2.6E-06 8.8E-11 61.2 9.7 79 85-169 3-93 (95)
63 2uzc_A Human pdlim5, PDZ and L 98.4 9.6E-07 3.3E-11 62.5 7.3 78 86-168 4-85 (88)
64 2fne_A Multiple PDZ domain pro 98.4 7.9E-07 2.7E-11 67.7 7.2 80 85-168 25-112 (117)
65 1ihj_A INAD; intermolecular di 98.4 1E-06 3.5E-11 63.5 7.4 78 87-168 7-96 (98)
66 1whd_A RGS3, regulator of G-pr 98.4 4.9E-07 1.7E-11 66.3 5.5 85 80-171 10-97 (100)
67 2i04_A Membrane-associated gua 98.4 2.3E-06 7.7E-11 60.2 8.5 77 87-167 2-85 (85)
68 2pkt_A PDZ and LIM domain prot 98.3 1.2E-06 4.1E-11 62.5 7.1 72 90-168 10-85 (91)
69 2vz5_A TAX1-binding protein 3; 98.3 1.8E-06 6.3E-11 67.7 8.8 84 81-169 19-124 (139)
70 3axa_A Afadin, nectin-3, prote 98.3 1.8E-06 6E-11 63.4 8.1 85 82-170 8-99 (106)
71 3egg_C Spinophilin; PP1, serin 98.3 1.5E-06 5E-11 71.1 8.4 82 82-167 77-169 (170)
72 1wh1_A KIAA1095 protein; PDZ d 98.3 1.4E-06 4.9E-11 66.2 7.8 83 83-171 17-109 (124)
73 1n7t_A 99-MER peptide of densi 98.3 1.9E-06 6.4E-11 62.9 8.0 83 81-169 7-101 (103)
74 1um7_A Synapse-associated prot 98.3 8.9E-07 3.1E-11 65.1 6.0 84 82-169 12-99 (113)
75 1nf3_C PAR-6B; semi-CRIB motif 98.3 1.3E-06 4.4E-11 66.9 7.0 80 85-168 29-124 (128)
76 2dls_A PDZ-rhogef, RHO guanine 98.3 4.5E-06 1.5E-10 60.2 9.5 78 85-170 8-88 (93)
77 2kom_A Partitioning defective 98.3 2.9E-06 1E-10 64.5 8.8 83 82-168 27-119 (121)
78 1wf7_A Enigma homologue protei 98.3 8E-07 2.7E-11 65.1 5.3 81 85-170 5-89 (103)
79 2iwq_A Multiple PDZ domain pro 98.3 3.1E-06 1.1E-10 65.0 8.9 77 87-169 26-119 (123)
80 1g9o_A NHE-RF; PDZ domain, com 98.3 3E-06 1E-10 60.2 8.1 73 93-170 14-87 (91)
81 3l4f_D SH3 and multiple ankyri 98.3 4E-06 1.4E-10 65.1 9.3 81 87-172 29-127 (132)
82 3hpk_A Protein interacting wit 98.3 4.3E-06 1.5E-10 63.3 9.3 85 82-170 16-106 (125)
83 1uit_A Human discs large 5 pro 98.3 1.9E-06 6.5E-11 64.4 7.2 80 88-172 22-104 (117)
84 1v5q_A GRIP1 homolog, glutamat 98.3 4E-06 1.4E-10 63.6 9.1 87 81-171 11-109 (122)
85 2kv8_A RGS12, regulator of G-p 98.3 1.3E-06 4.5E-11 61.4 5.8 78 86-170 3-83 (83)
86 2h2b_A Tight junction protein 98.3 7.5E-06 2.6E-10 59.9 10.1 81 82-168 4-96 (107)
87 2dkr_A LIN-7 homolog B; LIN-7B 98.3 2.4E-06 8.2E-11 60.8 7.0 79 87-169 7-90 (93)
88 3o46_A Maguk P55 subfamily mem 98.3 2.2E-06 7.4E-11 61.6 6.8 73 93-169 15-88 (93)
89 3tsv_A Tight junction protein 98.3 4.1E-06 1.4E-10 64.4 8.8 72 92-168 38-111 (124)
90 2rcz_A Tight junction protein 98.3 2E-06 6.8E-11 59.1 6.3 66 92-167 12-79 (81)
91 3e17_A Tight junction protein 98.3 3.1E-06 1.1E-10 61.0 7.5 70 94-171 14-83 (88)
92 1wfg_A Regulating synaptic mem 98.3 4.9E-06 1.7E-10 64.4 9.1 71 94-168 49-126 (131)
93 2iwo_A Multiple PDZ domain pro 98.2 2.1E-06 7.1E-11 65.6 6.7 81 85-169 24-113 (120)
94 2q3g_A PDZ and LIM domain prot 98.2 4.4E-06 1.5E-10 59.4 7.9 79 85-168 3-85 (89)
95 2kpk_A Membrane-associated gua 98.2 2.6E-06 8.9E-11 65.3 7.2 82 84-169 17-105 (129)
96 3cyy_A Tight junction protein 98.2 3.9E-06 1.3E-10 59.4 7.6 66 93-168 15-82 (92)
97 2edp_A Fragment, shroom family 98.2 1.6E-06 5.5E-11 63.5 5.7 83 82-169 8-94 (100)
98 1uew_A Membrane associated gua 98.2 5.1E-06 1.7E-10 62.0 8.5 82 83-169 8-103 (114)
99 3sfj_A TAX1-binding protein 3; 98.2 4E-06 1.4E-10 60.9 7.7 70 94-168 20-104 (104)
100 1wfv_A Membrane associated gua 98.2 7.5E-07 2.6E-11 64.5 3.8 83 84-170 10-97 (103)
101 2csj_A TJP2 protein; PDZ domai 98.2 5.4E-06 1.8E-10 62.1 8.5 82 82-169 11-104 (117)
102 3r68_A Na(+)/H(+) exchange reg 98.2 4.2E-06 1.4E-10 59.8 7.5 79 87-170 7-89 (95)
103 1x6d_A Interleukin-16; PDZ dom 98.2 4E-06 1.4E-10 62.8 7.5 84 82-169 12-103 (119)
104 1q3o_A Shank1; PDZ, GKAP, pept 98.2 7.3E-06 2.5E-10 60.5 8.7 79 86-169 8-104 (109)
105 1uju_A Scribble; PDZ domain, c 98.2 1.1E-06 3.6E-11 65.3 4.0 81 87-171 11-106 (111)
106 2ego_A General receptor for ph 98.2 6.5E-06 2.2E-10 59.5 8.1 75 86-167 5-94 (96)
107 4amh_A Disks large homolog 1; 98.2 5.3E-06 1.8E-10 61.6 7.7 75 92-170 12-93 (106)
108 2dc2_A GOPC, golgi associated 98.2 5.1E-06 1.7E-10 61.3 7.5 83 86-172 10-98 (103)
109 1ujd_A KIAA0559 protein; PDZ d 98.2 9.1E-06 3.1E-10 61.2 8.9 85 82-170 9-110 (117)
110 2cs5_A Tyrosine-protein phosph 98.2 4.1E-06 1.4E-10 62.7 6.9 81 85-169 15-106 (119)
111 3r0h_A INAD, inactivation-NO-a 98.2 8.9E-06 3E-10 65.0 9.2 82 84-169 17-108 (206)
112 3r0h_A INAD, inactivation-NO-a 98.2 9.1E-06 3.1E-10 64.9 9.2 84 85-173 113-200 (206)
113 4e34_A Golgi-associated PDZ an 98.2 6.1E-06 2.1E-10 58.2 7.2 77 87-167 4-86 (87)
114 3gsl_A Disks large homolog 4; 98.2 9.1E-06 3.1E-10 63.5 8.8 82 84-169 4-95 (196)
115 3nfk_A Tyrosine-protein phosph 98.1 8.7E-06 3E-10 59.6 8.1 79 85-167 17-106 (107)
116 3bpu_A Membrane-associated gua 98.1 1.7E-05 5.8E-10 56.2 9.0 77 85-168 3-85 (88)
117 2v90_A PDZ domain-containing p 98.1 8.9E-06 3E-10 58.5 7.5 73 93-170 14-90 (96)
118 2eaq_A LIM domain only protein 98.1 5.6E-06 1.9E-10 58.7 6.3 69 94-168 18-88 (90)
119 2jxo_A Ezrin-radixin-moesin-bi 98.1 7.9E-06 2.7E-10 58.9 7.2 74 87-167 11-91 (98)
120 3ngh_A PDZ domain-containing p 98.1 4.6E-06 1.6E-10 61.0 5.9 71 93-168 13-84 (106)
121 2gzv_A PRKCA-binding protein; 98.1 1.2E-05 4.2E-10 60.8 8.4 72 94-169 37-110 (114)
122 2vsp_A PDZ domain-containing p 98.1 3.5E-06 1.2E-10 60.2 5.1 77 87-168 5-85 (91)
123 1vb7_A PDZ and LIM domain 2; P 98.1 3.9E-06 1.3E-10 60.5 5.3 77 87-168 8-88 (94)
124 2edz_A PDZ domain-containing p 98.1 1.5E-05 5E-10 59.5 8.4 77 87-168 15-96 (114)
125 1ujv_A Membrane associated gua 98.1 2.1E-05 7.2E-10 57.6 9.0 79 83-169 8-91 (96)
126 2d8i_A T-cell lymphoma invasio 98.1 1.2E-05 4E-10 61.7 7.9 86 79-171 9-103 (114)
127 1uf1_A KIAA1526 protein; PDZ d 98.1 1.6E-05 5.6E-10 60.3 8.6 79 87-171 24-106 (128)
128 1uez_A KIAA1526 protein; PDZ d 98.1 5.4E-06 1.9E-10 60.3 5.5 78 85-168 8-92 (101)
129 1b8q_A Protein (neuronal nitri 98.1 5.4E-06 1.8E-10 62.7 5.6 81 85-171 8-96 (127)
130 2eeg_A PDZ and LIM domain prot 98.1 7E-06 2.4E-10 59.2 5.9 77 87-168 10-90 (94)
131 2eei_A PDZ domain-containing p 98.1 5.2E-06 1.8E-10 60.7 5.2 80 87-171 10-93 (106)
132 3k1r_A Harmonin; protein-prote 98.1 9.7E-06 3.3E-10 65.8 7.4 78 85-168 84-167 (192)
133 2f5y_A Regulator of G-protein 98.0 1.4E-05 4.7E-10 57.3 7.2 76 88-170 6-84 (91)
134 3qe1_A Sorting nexin-27, G pro 98.0 2E-05 6.8E-10 57.7 8.2 79 87-170 8-103 (107)
135 1x5n_A Harmonin; PDZ domain, u 98.0 1.9E-05 6.6E-10 58.5 8.2 71 92-168 26-98 (114)
136 1wi4_A Synip, syntaxin binding 98.0 2.2E-05 7.5E-10 58.8 8.3 78 87-168 17-104 (109)
137 2z17_A Pleckstrin homology SEC 98.0 6.6E-06 2.3E-10 60.3 5.3 71 87-164 17-102 (104)
138 3gsl_A Disks large homolog 4; 98.0 2.1E-05 7.2E-10 61.4 8.0 81 86-170 101-191 (196)
139 1v5l_A PDZ and LIM domain 3; a 98.0 5E-06 1.7E-10 61.0 4.1 73 90-169 12-88 (103)
140 3kzd_A TIAM-1, T-lymphoma inva 98.0 2.5E-05 8.6E-10 59.2 7.7 79 82-167 3-90 (94)
141 2pzd_A Serine protease HTRA2; 97.9 2.6E-05 8.9E-10 57.7 7.2 57 104-168 34-90 (113)
142 1v6b_A Harmonin isoform A1; st 97.9 4.3E-05 1.5E-09 57.8 8.5 83 85-171 20-109 (118)
143 1z87_A Alpha-1-syntrophin; pro 97.9 2.6E-05 9E-10 68.4 7.9 86 81-170 73-164 (263)
144 1p1d_A PDZ45, glutamate recept 97.9 4.3E-05 1.5E-09 61.4 8.4 82 84-169 5-98 (196)
145 2qt5_A Glutamate receptor-inte 97.9 5.1E-05 1.7E-09 60.8 8.3 78 85-168 106-194 (200)
146 1ufx_A KIAA1526 protein; PDZ d 97.9 3.4E-05 1.2E-09 57.4 6.7 79 87-169 8-97 (103)
147 3tsz_A Tight junction protein 97.8 4.2E-05 1.4E-09 69.6 8.4 73 91-168 17-91 (391)
148 2yub_A LIMK-2, LIM domain kina 97.8 4.4E-05 1.5E-09 58.6 7.3 70 94-170 28-106 (118)
149 2qbw_A PDZ-fibronectin fusion 97.8 7.2E-05 2.5E-09 59.4 8.6 71 93-169 2-82 (195)
150 3shw_A Tight junction protein 97.8 4.2E-05 1.4E-09 72.1 8.4 75 88-167 4-82 (468)
151 2vsv_A Rhophilin-2; scaffold p 97.8 6.4E-05 2.2E-09 57.3 7.8 76 88-170 26-105 (109)
152 2qt5_A Glutamate receptor-inte 97.8 7.9E-05 2.7E-09 59.7 8.6 78 85-168 7-92 (200)
153 2kjd_A Sodium/hydrogen exchang 97.8 5.5E-05 1.9E-09 56.9 7.0 75 87-168 11-92 (128)
154 3khf_A Microtubule-associated 97.8 3.7E-05 1.3E-09 55.5 5.5 71 93-168 13-92 (99)
155 1p1d_A PDZ45, glutamate recept 97.7 9.5E-05 3.2E-09 59.4 7.9 77 86-168 108-194 (196)
156 1w9e_A Syntenin 1; cell adhesi 97.7 9.2E-05 3.1E-09 58.1 7.2 72 87-166 6-84 (166)
157 2xkx_A Disks large homolog 4; 97.7 0.00011 3.7E-09 71.1 9.0 83 84-170 306-392 (721)
158 2edv_A FERM and PDZ domain-con 97.7 5.1E-05 1.7E-09 55.2 4.9 77 85-169 8-89 (96)
159 1wif_A RSGI RUH-020, riken cDN 97.6 8.3E-05 2.8E-09 58.5 5.7 83 85-172 27-114 (126)
160 1r6j_A Syntenin 1; PDZ, membra 97.6 0.00022 7.6E-09 52.5 7.2 73 86-168 5-81 (82)
161 2lob_A Golgi-associated PDZ an 96.7 1.2E-05 4.2E-10 60.9 0.0 79 82-165 24-109 (112)
162 1y7n_A Amyloid beta A4 precurs 97.5 0.00017 5.7E-09 52.7 5.6 64 94-167 25-88 (90)
163 3qik_A Phosphatidylinositol 3, 97.5 0.00018 6.1E-09 55.9 5.8 70 92-167 27-99 (101)
164 2xkx_A Disks large homolog 4; 97.5 0.00029 1E-08 68.1 8.4 83 82-168 56-148 (721)
165 1vae_A Rhophilin 2, rhophilin, 97.4 0.00013 4.4E-09 55.3 4.3 72 93-171 26-98 (111)
166 2p3w_A Probable serine proteas 97.3 0.00063 2.2E-08 50.2 7.1 57 104-168 34-90 (112)
167 2l97_A HTRA, putative serine p 97.3 0.00075 2.6E-08 52.2 7.6 57 104-168 56-114 (134)
168 3rle_A Golgi reassembly-stacki 97.3 0.00092 3.2E-08 54.9 8.5 79 94-180 96-181 (209)
169 3suz_A Amyloid beta A4 precurs 97.3 0.00015 5.1E-09 65.5 4.1 78 87-170 206-295 (388)
170 3i18_A LMO2051 protein; alpha- 97.2 0.001 3.6E-08 48.7 7.3 58 103-168 5-64 (100)
171 2krg_A Na(+)/H(+) exchange reg 97.2 0.00027 9.1E-09 59.9 4.2 76 87-167 11-91 (216)
172 1te0_A Protease DEGS; two doma 97.2 0.00088 3E-08 58.1 7.6 67 95-168 223-302 (318)
173 2kl1_A YLBL protein; structure 97.1 0.00067 2.3E-08 49.5 5.5 57 104-168 4-62 (94)
174 1y8t_A Hypothetical protein RV 97.1 0.0012 3.9E-08 57.2 7.8 70 95-171 231-303 (324)
175 4fgm_A Aminopeptidase N family 97.1 0.0005 1.7E-08 66.0 5.5 66 94-168 486-553 (597)
176 2kjp_A Uncharacterized protein 97.1 0.00032 1.1E-08 51.4 3.0 55 106-168 2-58 (91)
177 3id1_A Regulator of sigma E pr 97.0 0.00077 2.6E-08 49.3 4.9 57 107-170 4-62 (95)
178 2yuy_A RHO GTPase activating p 97.0 0.00023 7.9E-09 54.1 1.7 61 104-169 60-120 (126)
179 2i6v_A General secretion pathw 97.0 0.00054 1.9E-08 48.9 3.6 68 93-168 5-77 (87)
180 2zpm_A Regulator of sigma E pr 96.8 0.0011 3.6E-08 46.9 3.8 55 107-168 6-61 (91)
181 1lcy_A HTRA2 serine protease; 96.8 0.0028 9.6E-08 55.3 7.3 56 105-168 256-311 (325)
182 1fc6_A Photosystem II D1 prote 96.7 0.0034 1.2E-07 56.0 7.5 71 95-170 87-160 (388)
183 2i4s_A General secretion pathw 96.7 0.0023 7.9E-08 47.2 5.1 56 106-168 38-95 (105)
184 4a8c_A Periplasmic PH-dependen 96.5 0.0032 1.1E-07 57.4 6.1 57 105-168 363-419 (436)
185 3stj_A Protease DEGQ; serine p 96.5 0.0034 1.2E-07 55.8 5.7 67 95-168 242-321 (345)
186 3qo6_A Protease DO-like 1, chl 96.5 0.0033 1.1E-07 55.4 5.4 68 95-169 235-321 (348)
187 3soe_A Membrane-associated gua 96.4 0.016 5.3E-07 45.2 8.5 77 85-169 12-93 (113)
188 2hga_A Conserved protein MTH13 96.4 0.0088 3E-07 46.3 6.8 62 100-171 20-83 (125)
189 3rle_A Golgi reassembly-stacki 96.2 0.0056 1.9E-07 50.2 5.1 57 106-168 17-75 (209)
190 3pv2_A DEGQ; trypsin fold, PDZ 96.2 0.0056 1.9E-07 56.4 5.6 57 105-168 386-442 (451)
191 1w9e_A Syntenin 1; cell adhesi 96.2 0.0057 1.9E-07 47.9 4.8 44 86-135 89-136 (166)
192 4a8c_A Periplasmic PH-dependen 96.2 0.0099 3.4E-07 54.2 7.1 57 105-168 263-321 (436)
193 3pv2_A DEGQ; trypsin fold, PDZ 96.1 0.0091 3.1E-07 55.0 6.6 67 95-168 260-340 (451)
194 3k50_A Putative S41 protease; 95.6 0.016 5.4E-07 53.3 5.9 56 106-169 91-146 (403)
195 1ky9_A Protease DO, DEGP, HTRA 95.4 0.0027 9.2E-08 58.4 0.0 67 95-168 372-439 (448)
196 1k32_A Tricorn protease; prote 95.0 0.04 1.4E-06 53.2 6.9 68 94-169 738-815 (1045)
197 3num_A Serine protease HTRA1; 95.0 0.0041 1.4E-07 54.2 0.0 57 104-168 253-309 (332)
198 1ky9_A Protease DO, DEGP, HTRA 93.7 0.044 1.5E-06 50.4 3.8 57 105-168 286-344 (448)
199 4fln_A Protease DO-like 2, chl 93.5 0.15 5.2E-06 48.9 7.2 39 95-135 255-305 (539)
200 3suz_A Amyloid beta A4 precurs 93.4 0.014 4.8E-07 52.6 0.0 55 108-167 318-372 (388)
201 4fln_A Protease DO-like 2, chl 63.0 10 0.00036 36.3 5.7 58 106-171 416-473 (539)
202 1jt8_A EIF-1A, probable transl 44.0 13 0.00046 28.6 2.5 52 85-145 20-73 (102)
203 2j3t_D Trafficking protein par 39.7 1.3E+02 0.0043 26.0 8.3 74 84-168 25-101 (219)
204 2dgy_A MGC11102 protein; EIF-1 39.3 68 0.0023 24.9 5.9 52 85-145 15-68 (111)
205 1c05_A Ribosomal protein S4 de 36.0 12 0.00042 30.0 1.3 29 174-209 6-34 (159)
206 3pjy_A Hypothetical signal pep 34.7 31 0.0011 27.4 3.4 26 105-132 101-126 (136)
207 3m7a_A Uncharacterized protein 34.7 15 0.00052 29.5 1.6 24 106-131 116-139 (140)
208 1d7q_A Translation initiation 25.9 1.3E+02 0.0046 24.4 5.8 52 85-145 31-84 (143)
209 1vc3_B L-aspartate-alpha-decar 25.2 61 0.0021 25.1 3.5 18 117-134 48-65 (96)
210 3dor_A Protein CT_858, CPAF; m 24.3 87 0.003 30.7 5.1 37 95-136 86-122 (583)
211 2kpp_A LIN0431 protein; soluti 24.1 98 0.0034 24.0 4.5 47 86-132 30-79 (114)
212 1uhe_A Aspartate 1-decarboxyla 23.0 40 0.0014 26.2 2.0 18 117-134 46-63 (97)
213 1pqh_A Aspartate 1-decarboxyla 22.8 1.4E+02 0.0047 24.7 5.3 29 106-134 73-106 (143)
214 2equ_A PHD finger protein 20-l 22.7 57 0.0019 23.5 2.7 29 116-147 2-30 (74)
215 1p3h_A 10 kDa chaperonin; beta 22.6 53 0.0018 25.1 2.6 12 123-134 61-72 (99)
216 3plx_B Aspartate 1-decarboxyla 21.8 43 0.0015 26.2 2.0 18 117-134 47-64 (102)
217 2f9h_A PTS system, IIA compone 20.2 69 0.0024 25.5 2.9 62 96-167 27-93 (129)
No 1
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.78 E-value=2.4e-08 Score=71.37 Aligned_cols=81 Identities=20% Similarity=0.413 Sum_probs=61.6
Q ss_pred ccEEEEEecC----cceeEEeeeC-CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhccc
Q 026827 84 YEEYEVEIEQ----PYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (232)
Q Consensus 84 ~eeyeVeL~K----PLGL~Fee~~-dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~Rs 158 (232)
++.++|+|.| ++|+.+.... +.+++|..|.+++.|+++|.|++||+|+++... .+=. ..+.++...++...
T Consensus 3 ~~~~~v~l~k~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~---~v~~-~~~~~~~~~~~~~~ 78 (92)
T 2qg1_A 3 SDTLTIGLQKKPGKGLGLSIVGKRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGE---DVRN-ATQEAVAALLKCSL 78 (92)
T ss_dssp -CEEEEEEECCTTSCCSEEEECCSSSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTE---ECTT-CCHHHHHHHHHHCC
T ss_pred ceEEEEEEEeCCCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHcCC
Confidence 4678999987 4889988754 359999999999999999999999999998753 2211 12345666777656
Q ss_pred CceEEEEeec
Q 026827 159 GPLLMKMQKR 168 (232)
Q Consensus 159 Gpv~LkLeR~ 168 (232)
+++.|.+.|+
T Consensus 79 ~~v~l~v~R~ 88 (92)
T 2qg1_A 79 GTVTLEVGRI 88 (92)
T ss_dssp SEEEEEEECC
T ss_pred CeEEEEEEcc
Confidence 7899999885
No 2
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.76 E-value=4.1e-08 Score=70.70 Aligned_cols=82 Identities=18% Similarity=0.283 Sum_probs=62.0
Q ss_pred ccEEEEEecCc-----ceeEEeeeC-CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc
Q 026827 84 YEEYEVEIEQP-----YGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (232)
Q Consensus 84 ~eeyeVeL~KP-----LGL~Fee~~-dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R 157 (232)
++.++|+|.|. +|+.+.... +.+++|..|.+++.|+++|.|++||+|+++... .+=. ...-++...++..
T Consensus 2 ~~~~~v~l~k~~~~~~lG~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~---~v~~-~~~~~~~~~~~~~ 77 (95)
T 2vwr_A 2 MEILQVALHKRDSGEQLGIKLVRRTDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGH---DLKY-GTPELAAQIIQAS 77 (95)
T ss_dssp EEEEEEEEECSSTTCCCCEEEEECSSSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ECTT-CCHHHHHHHHHHC
T ss_pred cEEEEEEEEECCCCCcccEEEEeccCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHcC
Confidence 46789999973 899997764 449999999999999999999999999998742 2211 1234555666655
Q ss_pred cCceEEEEeecC
Q 026827 158 VGPLLMKMQKRY 169 (232)
Q Consensus 158 sGpv~LkLeR~~ 169 (232)
..++.|.+.|.-
T Consensus 78 g~~v~l~v~R~~ 89 (95)
T 2vwr_A 78 GERVNLTIARPG 89 (95)
T ss_dssp CSEEEEEEEEES
T ss_pred CCEEEEEEEcCC
Confidence 577899998853
No 3
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.70 E-value=7.3e-08 Score=69.43 Aligned_cols=82 Identities=20% Similarity=0.401 Sum_probs=63.9
Q ss_pred cEEEEEecC---cceeEEeeeC------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhh
Q 026827 85 EEYEVEIEQ---PYGLKFAKGR------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr 155 (232)
+.++|+|.| ++|+.+..+. +.+++|..|.+++.|+++|.|++||+|+++... .+-. ..+.++..+|+
T Consensus 3 ~~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~---~v~~-~~~~~~~~~l~ 78 (97)
T 2jil_A 3 RTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGI---RLLG-TTHAEAMSILK 78 (97)
T ss_dssp EEEEEEEECBTTBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ECSS-CCHHHHHHHHH
T ss_pred eEEEEEEEeCCCccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHH
Confidence 568888887 6899998764 349999999999999999999999999998742 2211 12667777887
Q ss_pred cccCceEEEEeecCC
Q 026827 156 QRVGPLLMKMQKRYG 170 (232)
Q Consensus 156 ~RsGpv~LkLeR~~~ 170 (232)
....++.|.+.|...
T Consensus 79 ~~g~~v~l~v~R~~~ 93 (97)
T 2jil_A 79 QCGQEAALLIEYDVS 93 (97)
T ss_dssp HSCSEEEEEEEEECC
T ss_pred cCCCeEEEEEEeCCC
Confidence 755688999998543
No 4
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.67 E-value=1.5e-07 Score=69.29 Aligned_cols=85 Identities=22% Similarity=0.434 Sum_probs=65.9
Q ss_pred ccccEEEEEec---CcceeEEeeeCC--------CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhH
Q 026827 82 EKYEEYEVEIE---QPYGLKFAKGRD--------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRT 150 (232)
Q Consensus 82 ~~~eeyeVeL~---KPLGL~Fee~~d--------GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t 150 (232)
...+.++|+|. +++|+.+..+.+ .++||..|.+++.|+++|.|++||+|+++... .+=. ..+.++
T Consensus 4 ~~~~~~~v~l~~~~~glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~---~v~~-~~~~~~ 79 (105)
T 1wha_A 4 GSSGRHVACLARSERGLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGV---DVTE-ARHDHA 79 (105)
T ss_dssp CCCEEEEEEECCCTTCCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSC---BCTT-CCHHHH
T ss_pred CCCeeEEEEEEeCCCccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCE---ECCC-CCHHHH
Confidence 34577899985 568899987543 59999999999999999999999999998742 2211 125677
Q ss_pred HHHhhcccCceEEEEeecCC
Q 026827 151 MYTIRQRVGPLLMKMQKRYG 170 (232)
Q Consensus 151 ~~AIr~RsGpv~LkLeR~~~ 170 (232)
..+|+....++.|.+.|...
T Consensus 80 ~~~l~~~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 80 VSLLTAASPTIALLLEREAG 99 (105)
T ss_dssp HHHHTSCCSCEEEEEEECCC
T ss_pred HHHHHcCCCeEEEEEEECCC
Confidence 78888666789999999753
No 5
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.67 E-value=9.3e-08 Score=69.25 Aligned_cols=80 Identities=21% Similarity=0.452 Sum_probs=62.1
Q ss_pred cEEEEEecC---cceeEEeeeCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccC
Q 026827 85 EEYEVEIEQ---PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVG 159 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsG 159 (232)
+.+.|+|+| ++|+.+....+ ++++|..|.+++.|+++|.|++||+|+++-.. .+-. ..+.++...|+....
T Consensus 5 ~~~~v~l~~~~~~lG~~i~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~---~v~~-~~~~~~~~~l~~~g~ 80 (97)
T 1n7e_A 5 IIYTVELKRYGGPLGITISGTEEPFDPIIISSLTKGGLAERTGAIHIGDRILAINSS---SLKG-KPLSEAIHLLQMAGE 80 (97)
T ss_dssp CEEEEEEECTTSCCCEEEECCSSTTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTE---ECTT-CCHHHHHHHHHTCCS
T ss_pred eEEEEEEEeCCCCcCEEEEcccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHcCCC
Confidence 568999987 68899887654 69999999999999999999999999998753 3311 125566677774446
Q ss_pred ceEEEEeec
Q 026827 160 PLLMKMQKR 168 (232)
Q Consensus 160 pv~LkLeR~ 168 (232)
++.|.+.|.
T Consensus 81 ~v~l~v~R~ 89 (97)
T 1n7e_A 81 TVTLKIKKQ 89 (97)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEeC
Confidence 789999874
No 6
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.65 E-value=1.3e-07 Score=68.95 Aligned_cols=83 Identities=14% Similarity=0.249 Sum_probs=62.7
Q ss_pred ccccEEEEEecC----cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc
Q 026827 82 EKYEEYEVEIEQ----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (232)
Q Consensus 82 ~~~eeyeVeL~K----PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R 157 (232)
..++.++|+|.| .+|+.+.. .+.+++|..|.+++.|+++|.|++||+|+++... .+-.. ..-.+...++..
T Consensus 5 ~~~~~~~v~l~~~~~~glG~~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~---~v~~~-~~~~~~~~~~~~ 79 (96)
T 2qkv_A 5 NSLEKFNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGD---ALEGL-PFQVSYALFKGA 79 (96)
T ss_dssp CCCCCEEEEEECBTTBCCCEEEEE-CSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTE---ECTTC-CHHHHHHHHHTC
T ss_pred HHCceEEEEEEeCCCCCccEEEEe-CCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCE---ECCCC-CHHHHHHHHhcC
Confidence 446778999965 68888776 4568999999999999999999999999998743 22111 233455666666
Q ss_pred cCceEEEEeecC
Q 026827 158 VGPLLMKMQKRY 169 (232)
Q Consensus 158 sGpv~LkLeR~~ 169 (232)
.+++.|.+.|+.
T Consensus 80 ~~~v~l~v~R~~ 91 (96)
T 2qkv_A 80 NGKVSMEVTRPK 91 (96)
T ss_dssp SSEEEEEEECCC
T ss_pred CCcEEEEEEeCC
Confidence 688999999864
No 7
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.64 E-value=1.4e-07 Score=67.22 Aligned_cols=81 Identities=19% Similarity=0.427 Sum_probs=61.9
Q ss_pred ccEEEEEecCc---ceeEEeeeC------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHh
Q 026827 84 YEEYEVEIEQP---YGLKFAKGR------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (232)
Q Consensus 84 ~eeyeVeL~KP---LGL~Fee~~------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AI 154 (232)
++.++|+|.|+ +|+.+.... +++++|..|.+++.|+++|.|++||+|+++... .+= ...+.++...+
T Consensus 3 ~~~~~v~l~~~~~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~---~v~-~~~~~~~~~~~ 78 (97)
T 2iwn_A 3 SETFDVELTKNVQGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGT---NLQ-GFTNQQAVEVL 78 (97)
T ss_dssp EEEEEEEEECBTTBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTE---ECT-TSCHHHHHHHH
T ss_pred cEEEEEEEecCCCCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCE---ECC-CCCHHHHHHHH
Confidence 46788999887 899998762 469999999999999999999999999998742 111 11234566677
Q ss_pred hcccCceEEEEeec
Q 026827 155 RQRVGPLLMKMQKR 168 (232)
Q Consensus 155 r~RsGpv~LkLeR~ 168 (232)
+....++.|.+.|.
T Consensus 79 ~~~~~~v~l~v~r~ 92 (97)
T 2iwn_A 79 RHTGQTVLLTLMRR 92 (97)
T ss_dssp HTCCSEEEEEEEEE
T ss_pred HcCCCeEEEEEEeC
Confidence 76556789998874
No 8
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.62 E-value=1.1e-07 Score=71.48 Aligned_cols=77 Identities=17% Similarity=0.352 Sum_probs=60.1
Q ss_pred EEEecC----cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEE
Q 026827 88 EVEIEQ----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLM 163 (232)
Q Consensus 88 eVeL~K----PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~L 163 (232)
.|+|.| +||+.+....+++++|..|.|++.|+++|.|++||+|+++... .+.. ..+.++...|+...+++.|
T Consensus 15 ~v~l~K~~~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~---~v~~-~~~~~~~~~l~~~~~~v~L 90 (97)
T 2ejy_A 15 LIQFEKVTEEPMGICLKLNEKQSCTVARILHGGMIHRQGSLHVGDEILEINGT---NVTN-HSVDQLQKAMKETKGMISL 90 (97)
T ss_dssp EEEEEECSSSCCSEEEEECTTCCEEEEEECSSSHHHHHTCCCTTCEEEEETTB---CCCS-SCSHHHHHHHHHCCEEEEE
T ss_pred EEEEEeCCCCCeeEEEEeCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHcCCCeEEE
Confidence 566655 8899998777789999999999999999999999999998742 3322 1356677777765678888
Q ss_pred EEeec
Q 026827 164 KMQKR 168 (232)
Q Consensus 164 kLeR~ 168 (232)
++.+.
T Consensus 91 ~V~~~ 95 (97)
T 2ejy_A 91 KVIPN 95 (97)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 88764
No 9
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.61 E-value=3.2e-07 Score=68.89 Aligned_cols=81 Identities=15% Similarity=0.236 Sum_probs=62.1
Q ss_pred cEEEEEec----CcceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCc
Q 026827 85 EEYEVEIE----QPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP 160 (232)
Q Consensus 85 eeyeVeL~----KPLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGp 160 (232)
+.++|+|. +.+|+.+.. .+.+++|..|.++|.|+++|.|++||+|+++... .+-.. ..-++...++...++
T Consensus 2 ~~~~v~L~k~~~~glG~~i~~-~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~---~v~~~-~~~~~~~~~~~~~~~ 76 (106)
T 2la8_A 2 EKFNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGD---ALEGL-PFQVCYALFKGANGK 76 (106)
T ss_dssp EEEEEEECCBSSSTTCCEEEE-CSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSC---BCSSS-CHHHHHHHHHSCBSC
T ss_pred eEEEEEEEeCCCCccCEEEEe-CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCE---ECCCC-CHHHHHHHHhCCCCe
Confidence 56888887 458888876 4568999999999999999999999999998643 33222 233555677766688
Q ss_pred eEEEEeecCC
Q 026827 161 LLMKMQKRYG 170 (232)
Q Consensus 161 v~LkLeR~~~ 170 (232)
+.|.+.|+..
T Consensus 77 v~l~v~R~~~ 86 (106)
T 2la8_A 77 VSMEVTRPKP 86 (106)
T ss_dssp EEEEEEECCS
T ss_pred EEEEEEeCCC
Confidence 9999999643
No 10
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.61 E-value=1.7e-07 Score=68.02 Aligned_cols=84 Identities=23% Similarity=0.421 Sum_probs=62.7
Q ss_pred hccccEEEEEecC---cceeEEeeeCCC-CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc
Q 026827 81 EEKYEEYEVEIEQ---PYGLKFAKGRDG-GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (232)
Q Consensus 81 ~~~~eeyeVeL~K---PLGL~Fee~~dG-gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~ 156 (232)
+.+.+..+|+|.| ++|+.+..+.++ ++||..|.|++.|+++|.|++||+|+++... .+-. ...-.+...++.
T Consensus 7 ~~~~~~~~v~l~k~~~glG~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~---~v~~-~~~~~~~~~~~~ 82 (104)
T 3i4w_A 7 DIPREPRRIVIHRGSTGLGFNIVGGEXGEGIFISFILAGGPADLSGELRKGDQILSVNGV---DLRN-ASHEQAAIALKN 82 (104)
T ss_dssp CCCSSCEEEEEECBTTBTSEEEEECC-CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTE---ECTT-CCHHHHHHHHHT
T ss_pred CCCCccEEEEEEeCCCccCEEEECCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHc
Confidence 3455667788876 788999887666 9999999999999999999999999998642 3311 122345556666
Q ss_pred ccCceEEEEeec
Q 026827 157 RVGPLLMKMQKR 168 (232)
Q Consensus 157 RsGpv~LkLeR~ 168 (232)
...++.|.+.|.
T Consensus 83 ~~~~v~l~v~r~ 94 (104)
T 3i4w_A 83 AGQTVTIIAQYK 94 (104)
T ss_dssp SCSEEEEEEEEC
T ss_pred CCCeEEEEEEEC
Confidence 557789999884
No 11
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.60 E-value=3.1e-07 Score=66.22 Aligned_cols=82 Identities=23% Similarity=0.389 Sum_probs=62.1
Q ss_pred cEEEEEecC---cceeEEeeeCC---CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhccc
Q 026827 85 EEYEVEIEQ---PYGLKFAKGRD---GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~d---GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~Rs 158 (232)
+++.|+|.| ++|+.+..+.+ ++++|..|.+++.|+++|.|++||+|+++... .+=. ..+.++...++...
T Consensus 4 ~~~~v~l~~~~~~lG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~---~v~~-~~~~~~~~~~~~~~ 79 (98)
T 2opg_A 4 CETTIEISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGI---DLRK-ATHDEAINVLRQTP 79 (98)
T ss_dssp EEEEEEEECBTTBTCEEEEECTTSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ECTT-CCHHHHHHHHHTCC
T ss_pred CEEEEEEEECCCcccEEEecCCCCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHhCC
Confidence 457777765 58899987765 79999999999999999999999999998742 2211 12446667777555
Q ss_pred CceEEEEeecCC
Q 026827 159 GPLLMKMQKRYG 170 (232)
Q Consensus 159 Gpv~LkLeR~~~ 170 (232)
.++.|.+.|.-.
T Consensus 80 ~~v~l~v~R~~~ 91 (98)
T 2opg_A 80 QRVRLTLYRDEA 91 (98)
T ss_dssp SEEEEEEEECSS
T ss_pred CeEEEEEEcCCC
Confidence 789999988543
No 12
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.60 E-value=4.9e-07 Score=66.41 Aligned_cols=79 Identities=19% Similarity=0.357 Sum_probs=59.3
Q ss_pred EEEEecC----cceeEEeeeCCC----CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc--
Q 026827 87 YEVEIEQ----PYGLKFAKGRDG----GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-- 156 (232)
Q Consensus 87 yeVeL~K----PLGL~Fee~~dG----gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~-- 156 (232)
.+|+|.| +||+.+.....| +++|..|.+++.|+++|.|++||+|+++.. ..+ ....+.++...|+.
T Consensus 11 ~~v~l~k~~g~~lG~~i~~~~~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing---~~v-~~~~~~~~~~~l~~~~ 86 (101)
T 2yt7_A 11 REVHLEKRRGEGLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAING---TSL-VGLPLAACQAAVRETK 86 (101)
T ss_dssp EEEEEECCTTCCCCEEEEECCCSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESS---CBC-TTSCHHHHHHHHHHTT
T ss_pred EEEEEEeCCCCccCEEEEeCCCCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EEC-CCCCHHHHHHHHHhCC
Confidence 4555553 799999865444 799999999999999777999999999863 344 11345567777875
Q ss_pred ccCceEEEEeecC
Q 026827 157 RVGPLLMKMQKRY 169 (232)
Q Consensus 157 RsGpv~LkLeR~~ 169 (232)
...++.|++.|.+
T Consensus 87 ~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 87 SQTSVTLSIVHCP 99 (101)
T ss_dssp TSSEEEEEECCCC
T ss_pred CCCeEEEEEEeCC
Confidence 3467899999865
No 13
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.60 E-value=2.1e-07 Score=69.44 Aligned_cols=82 Identities=23% Similarity=0.432 Sum_probs=64.4
Q ss_pred cEEEEEecC----cceeEEeeeC----CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc
Q 026827 85 EEYEVEIEQ----PYGLKFAKGR----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (232)
Q Consensus 85 eeyeVeL~K----PLGL~Fee~~----dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~ 156 (232)
+.++|+|.| +||+.+..+. +.++||..|.+++.|+++|.|++||+|+++-.. .+-. ..+.++...|+.
T Consensus 5 ~~~~v~l~k~~~~~lG~~i~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~---~v~~-~~~~~~~~~l~~ 80 (108)
T 3cbz_A 5 NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDM---NFEN-MSNDDAVRVLRD 80 (108)
T ss_dssp CEEEEEECHHHHCCCCEEEEEECSSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ETTS-CCHHHHHHHHHH
T ss_pred eEEEEEEEeCCCCccCEEEEcCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHh
Confidence 678899885 6999998763 469999999999999999999999999998742 2211 135677777875
Q ss_pred c---cCceEEEEeecCC
Q 026827 157 R---VGPLLMKMQKRYG 170 (232)
Q Consensus 157 R---sGpv~LkLeR~~~ 170 (232)
. .++|.|++.|+.-
T Consensus 81 ~~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 81 IVHKPGPIVLTVAKSGG 97 (108)
T ss_dssp HHTSSSCEEEEEECCCC
T ss_pred cccCCCeEEEEEEeCCC
Confidence 4 5789999999643
No 14
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=1.9e-07 Score=68.85 Aligned_cols=85 Identities=18% Similarity=0.356 Sum_probs=63.9
Q ss_pred ccccEEEEEecC---cceeEEeee--------CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhH
Q 026827 82 EKYEEYEVEIEQ---PYGLKFAKG--------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRT 150 (232)
Q Consensus 82 ~~~eeyeVeL~K---PLGL~Fee~--------~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t 150 (232)
..++.+.|+|.| +||+.+... .+.++||..|.+++.|+++|.|++||+|+++... .+=. ...-++
T Consensus 6 ~~~~~~~v~l~k~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~---~v~~-~~~~~~ 81 (107)
T 1wf8_A 6 SGLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGI---SLVG-VTQNFA 81 (107)
T ss_dssp CCEEEEEEEEECBTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTE---ECBS-CCHHHH
T ss_pred CCceEEEEEEEECCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCE---ECCC-CCHHHH
Confidence 456778888855 788998872 2358999999999999999999999999998742 2211 123456
Q ss_pred HHHhhcccCceEEEEeecCC
Q 026827 151 MYTIRQRVGPLLMKMQKRYG 170 (232)
Q Consensus 151 ~~AIr~RsGpv~LkLeR~~~ 170 (232)
..+++....++.|++.|...
T Consensus 82 ~~~~~~~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 82 ATVLRNTKGNVRFVIGREKP 101 (107)
T ss_dssp HHHHHHCCSEEEEEEEEECC
T ss_pred HHHHhcCCCeEEEEEEeCCC
Confidence 66777656789999998654
No 15
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.58 E-value=4.2e-07 Score=69.99 Aligned_cols=84 Identities=17% Similarity=0.290 Sum_probs=64.7
Q ss_pred ccccEEEEEecC---cceeEEeeeCC-----CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHH
Q 026827 82 EKYEEYEVEIEQ---PYGLKFAKGRD-----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYT 153 (232)
Q Consensus 82 ~~~eeyeVeL~K---PLGL~Fee~~d-----GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~A 153 (232)
...+.++|+|.| +||+.+..+.+ .++||..|.+++.|+++|.|++||+|++|-.. .+-.. .+.++...
T Consensus 26 ~~~~~~~v~l~k~~~glG~~i~gg~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~---~v~~~-~~~~~~~~ 101 (130)
T 1i16_A 26 AEATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGT---AMQGL-TRFEAWNI 101 (130)
T ss_dssp SSEEEEEEEEETTSSSTTEEEECCCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSC---BGGGS-CHHHHHHH
T ss_pred CCCcEEEEEEEcCCCccCEEEecCcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECCCC-CHHHHHHH
Confidence 345667888887 89999987655 48999999999999999669999999998753 22222 45677888
Q ss_pred hhccc-CceEEEEeecC
Q 026827 154 IRQRV-GPLLMKMQKRY 169 (232)
Q Consensus 154 Ir~Rs-Gpv~LkLeR~~ 169 (232)
|+... .++.|.+.|+-
T Consensus 102 l~~~~~~~v~l~v~r~~ 118 (130)
T 1i16_A 102 IKALPDGPVTIVIRRKS 118 (130)
T ss_dssp HHTSCSSEEEEEEEEES
T ss_pred HHhCCCceEEEEEEeCC
Confidence 88654 45999999863
No 16
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.58 E-value=3.5e-07 Score=65.16 Aligned_cols=81 Identities=21% Similarity=0.342 Sum_probs=59.9
Q ss_pred cccEEEEEecC-----cceeEEeeeC-CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc
Q 026827 83 KYEEYEVEIEQ-----PYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (232)
Q Consensus 83 ~~eeyeVeL~K-----PLGL~Fee~~-dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~ 156 (232)
+.+.++|+|.| .+|+.+..+. +.+++|..|.+++.|+++| |++||+|+++... .+-.. ..-+....++.
T Consensus 4 ~~~~~~v~l~k~~~~~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~---~v~~~-~~~~~~~~~~~ 78 (91)
T 1m5z_A 4 PVELHKVTLYKDSGMEDFGFSVADGLLEKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHV---RTRDF-DCCLVVPLIAE 78 (91)
T ss_dssp CCEEEEEEEECCTTCSSSSEEEEECTTSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTE---ECTTC-CHHHHHHHHHT
T ss_pred CcceEEEEEEECCCCCCccEEEEeccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHc
Confidence 45778899976 6899998765 4599999999999999999 9999999998753 22111 12234455554
Q ss_pred ccCceEEEEeec
Q 026827 157 RVGPLLMKMQKR 168 (232)
Q Consensus 157 RsGpv~LkLeR~ 168 (232)
...++.|.+.|.
T Consensus 79 ~g~~v~l~v~R~ 90 (91)
T 1m5z_A 79 SGNKLDLVISRN 90 (91)
T ss_dssp STTEEEEEEEEC
T ss_pred CCCEEEEEEEeC
Confidence 455788998884
No 17
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.57 E-value=2.5e-07 Score=71.01 Aligned_cols=93 Identities=19% Similarity=0.323 Sum_probs=65.0
Q ss_pred cCCCCchhhccccEEEEEecC----cceeEEeeeC-----CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceee
Q 026827 73 AESGSEEQEEKYEEYEVEIEQ----PYGLKFAKGR-----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWP 143 (232)
Q Consensus 73 ~~~~~~~~~~~~eeyeVeL~K----PLGL~Fee~~-----dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWp 143 (232)
++++....-.+..+..|+|.| ++|+.+..+. +.++||..|.++|.|+++|.|++||+|+++... .+-.
T Consensus 12 ~~~~~~~~~~~~~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~---~v~~ 88 (118)
T 3b76_A 12 DLGTENLYFQSMHEKVVNIQKDPGESLGMTVAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGV---ELTE 88 (118)
T ss_dssp ------CCCEEEEEEEEEEECCTTCCCCEEEEECSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTE---EGGG
T ss_pred CCCccccccCCCCcEEEEEEeCCCCccCEEEecCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCE---ECCC
Confidence 333333333444556677744 5889988764 348999999999999999999999999998743 2221
Q ss_pred ccchhhHHHHhhcccCceEEEEeecC
Q 026827 144 AAEYGRTMYTIRQRVGPLLMKMQKRY 169 (232)
Q Consensus 144 A~~~G~t~~AIr~RsGpv~LkLeR~~ 169 (232)
....++..+|+...+.|.|++.|..
T Consensus 89 -~~~~~~~~~l~~~~~~v~L~v~R~~ 113 (118)
T 3b76_A 89 -VSRSEAVALLKRTSSSIVLKALEVK 113 (118)
T ss_dssp -SCHHHHHHHHHSCCSEEEEEEEEEE
T ss_pred -CCHHHHHHHHHcCCCeEEEEEEECC
Confidence 2555778888877788999998853
No 18
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.57 E-value=2.9e-07 Score=69.90 Aligned_cols=85 Identities=24% Similarity=0.422 Sum_probs=66.1
Q ss_pred ccccEEEEEecC----cceeEEeee-------CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhH
Q 026827 82 EKYEEYEVEIEQ----PYGLKFAKG-------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRT 150 (232)
Q Consensus 82 ~~~eeyeVeL~K----PLGL~Fee~-------~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t 150 (232)
...+.++|+|.| +||+.+... .++++||..|.+++.|+++|.|++||+|+++... .+-. ..+.++
T Consensus 12 ~~~~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~---~v~~-~~~~~~ 87 (129)
T 2dmz_A 12 SLFETYNVELVRKDGQSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGV---NIQG-FANHDV 87 (129)
T ss_dssp CCEEEEEEEECCCTTCCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTB---CCTT-CCHHHH
T ss_pred CCCcEEEEEEEeCCCCCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCE---ECCC-CCHHHH
Confidence 457889999955 789999874 3468999999999999999999999999998753 2211 125567
Q ss_pred HHHhhcccCceEEEEeecCC
Q 026827 151 MYTIRQRVGPLLMKMQKRYG 170 (232)
Q Consensus 151 ~~AIr~RsGpv~LkLeR~~~ 170 (232)
..+|+....++.|.+.|.-.
T Consensus 88 ~~~l~~~~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 88 VEVLRNAGQVVHLTLVRRKT 107 (129)
T ss_dssp HHHHHHCCSSEEEEEEEESS
T ss_pred HHHHHcCCCeEEEEEEeCCc
Confidence 77787756788999998643
No 19
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.57 E-value=3.9e-07 Score=66.29 Aligned_cols=84 Identities=25% Similarity=0.413 Sum_probs=63.6
Q ss_pred ccEEEEEecC---cceeEEeeeC-------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHH
Q 026827 84 YEEYEVEIEQ---PYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYT 153 (232)
Q Consensus 84 ~eeyeVeL~K---PLGL~Fee~~-------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~A 153 (232)
++.++|+|.| +||+.+..+. +.++||..|.+++.|+++|.|++||+|+++... .+-. ..+.++..+
T Consensus 3 ~~~~~v~l~k~~~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~---~v~~-~~~~~~~~~ 78 (102)
T 2i1n_A 3 FKYEEIVLERGNSGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEV---DVSE-VVHSRAVEA 78 (102)
T ss_dssp EEEEEEEEECBTTBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ECSS-CCHHHHHHH
T ss_pred ceEEEEEEEECCCcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCE---ECCC-CCHHHHHHH
Confidence 4567788875 6889998754 359999999999999999999999999998742 2221 134566677
Q ss_pred hhcccCceEEEEeecCCc
Q 026827 154 IRQRVGPLLMKMQKRYGK 171 (232)
Q Consensus 154 Ir~RsGpv~LkLeR~~~~ 171 (232)
++....++.|.+.|....
T Consensus 79 ~~~~g~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 79 LKEAGPVVRLVVRRRQPP 96 (102)
T ss_dssp HHHSCSEEEEEEEEECCC
T ss_pred HHcCCCeEEEEEEeCCCC
Confidence 776557889999986543
No 20
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.57 E-value=4.5e-07 Score=66.71 Aligned_cols=85 Identities=22% Similarity=0.435 Sum_probs=65.4
Q ss_pred ccccEEEEEecCc----ceeEEeeeCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhh
Q 026827 82 EKYEEYEVEIEQP----YGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155 (232)
Q Consensus 82 ~~~eeyeVeL~KP----LGL~Fee~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr 155 (232)
.+....+|+|.|+ +|+.+..+.+ .+++|..|.+++.|+++| |++||+|+++... .+-. ..+.++..+|+
T Consensus 12 ~~~~~~~v~l~k~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~---~v~~-~~~~~~~~~l~ 86 (104)
T 1wi2_A 12 TQFLPRIVTLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDV---DFQD-IEHSKAVEILK 86 (104)
T ss_dssp CSSCCEEEEECCCTTCCCSEEEECCSSSCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTE---ECSS-CCHHHHHHHHH
T ss_pred CCCCCEEEEEEeCCCCCccEEEEcccCCCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCE---ECCC-CCHHHHHHHHh
Confidence 4455678888764 7899987644 489999999999999999 9999999998742 2211 13667778888
Q ss_pred cccCceEEEEeecCCcc
Q 026827 156 QRVGPLLMKMQKRYGKM 172 (232)
Q Consensus 156 ~RsGpv~LkLeR~~~~~ 172 (232)
. ..++.|.+.|...+.
T Consensus 87 ~-~~~v~l~v~r~~~~~ 102 (104)
T 1wi2_A 87 T-AREISMRVRFFSGPS 102 (104)
T ss_dssp H-SSSEEEEEECCCCSC
T ss_pred C-CCEEEEEEEECCCCC
Confidence 7 678999999876543
No 21
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.57 E-value=1.2e-07 Score=68.52 Aligned_cols=76 Identities=20% Similarity=0.378 Sum_probs=59.3
Q ss_pred EEEecC----cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeecc--chhhHHHHhhcccCce
Q 026827 88 EVEIEQ----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAA--EYGRTMYTIRQRVGPL 161 (232)
Q Consensus 88 eVeL~K----PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~--~~G~t~~AIr~RsGpv 161 (232)
.|+|.| ++|+.+....+|+++|..|.+++.|++++.+++||+|+++.. ++.. .+.++...|+...+++
T Consensus 4 ~V~l~K~~~~~lG~~i~~~~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing------~~v~~~~~~~~~~~l~~~~~~v 77 (88)
T 1kwa_A 4 LVQFQKNTDEPMGITLKMNELNHCIVARIMHGGMIHRQGTLHVGDEIREING------ISVANQTVEQLQKMLREMRGSI 77 (88)
T ss_dssp EEEEEECSSSCCCEEEECSCGGGEEEEEECTTSHHHHHTCCCTTCEEEEETT------EEGGGSCHHHHHHHHHHCCEEE
T ss_pred EEEEEeCCCCceeEEEEeCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC------EECCCCCHHHHHHHHhcCCCcE
Confidence 355543 589999876568999999999999999555999999999864 2333 5667788888766789
Q ss_pred EEEEeecC
Q 026827 162 LMKMQKRY 169 (232)
Q Consensus 162 ~LkLeR~~ 169 (232)
.|++.|+.
T Consensus 78 ~l~v~r~~ 85 (88)
T 1kwa_A 78 TFKIVPSY 85 (88)
T ss_dssp EEEEECCC
T ss_pred EEEEECCc
Confidence 99998854
No 22
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.56 E-value=3e-07 Score=67.71 Aligned_cols=85 Identities=28% Similarity=0.501 Sum_probs=64.8
Q ss_pred ccccEEEEEecC---cceeEEe-----ee-----CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchh
Q 026827 82 EKYEEYEVEIEQ---PYGLKFA-----KG-----RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYG 148 (232)
Q Consensus 82 ~~~eeyeVeL~K---PLGL~Fe-----e~-----~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G 148 (232)
.+.+.++|+|.| +||+.+. .+ .+.++||..|.+++.|+++|.|++||+|+++... .+=. ..+-
T Consensus 6 ~~~~~~~v~l~k~~~~lG~~i~~~~~~gg~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~---~v~~-~~~~ 81 (108)
T 1q7x_A 6 KPGDIFEVELAKNDNSLGISVTVLFDKGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGV---SLEG-ATHK 81 (108)
T ss_dssp CSSSEEEEEEESSSCSCCEEESSSSSSBCBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTE---ECBS-CTTS
T ss_pred CCCcEEEEEEEECCCCccEEEEEeccCCCccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCE---ECCC-CCHH
Confidence 445779999976 7999998 32 2469999999999999999999999999998742 2211 1445
Q ss_pred hHHHHhhcccCceEEEEeecCC
Q 026827 149 RTMYTIRQRVGPLLMKMQKRYG 170 (232)
Q Consensus 149 ~t~~AIr~RsGpv~LkLeR~~~ 170 (232)
++..+++....++.|.+.|...
T Consensus 82 ~~~~~~~~~g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 82 QAVETLRNTGQVVHLLLEKGQS 103 (108)
T ss_dssp HHHHHHHHTTSEEEEEEECCCC
T ss_pred HHHHHHHcCCCeEEEEEEeCCc
Confidence 6677777656788999998543
No 23
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.55 E-value=2.9e-07 Score=69.02 Aligned_cols=78 Identities=26% Similarity=0.415 Sum_probs=59.4
Q ss_pred EEEEEecC----cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCce
Q 026827 86 EYEVEIEQ----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (232)
Q Consensus 86 eyeVeL~K----PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv 161 (232)
...|+|.| ++|+.+... +.+++|..|.+++.|+++|.+++||+|+++... .+- ...+.++..+|+...+++
T Consensus 26 ~~~v~l~k~~~~~lG~~i~~~-~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~---~v~-~~~~~~~~~~l~~~~~~v 100 (113)
T 1va8_A 26 VKIVRIEKARDIPLGATVRNE-MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGI---EIR-GKDVNEVFDLLSDMHGTL 100 (113)
T ss_dssp CEEEEEEECTTCCCCEEEEEC-SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTE---ECT-TCCHHHHHHHHHHCCEEE
T ss_pred eEEEEEEeCCCCceeEEEEeC-CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCE---ECC-CCCHHHHHHHHHcCCCeE
Confidence 34566764 788888764 679999999999999999966999999998642 221 114557778887666789
Q ss_pred EEEEeec
Q 026827 162 LMKMQKR 168 (232)
Q Consensus 162 ~LkLeR~ 168 (232)
.|++.|.
T Consensus 101 ~l~v~r~ 107 (113)
T 1va8_A 101 TFVLIPS 107 (113)
T ss_dssp EEEEECC
T ss_pred EEEEEEC
Confidence 9998874
No 24
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.55 E-value=4.6e-07 Score=66.84 Aligned_cols=86 Identities=16% Similarity=0.398 Sum_probs=65.3
Q ss_pred ccccEEEEEecC---cceeEEeeeC----------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchh
Q 026827 82 EKYEEYEVEIEQ---PYGLKFAKGR----------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYG 148 (232)
Q Consensus 82 ~~~eeyeVeL~K---PLGL~Fee~~----------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G 148 (232)
+.++.++|+|.| ++|+.+..+. +.++||..|.+++.|+++|.|++||+|+++-.. .+ ....+-
T Consensus 5 ~~~~~~~v~l~k~~~~lG~~i~g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~---~v-~~~~~~ 80 (107)
T 1uhp_A 5 SSGKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGR---DL-SRATHD 80 (107)
T ss_dssp CSSEEEEEEECCSSSCCSEEEECCCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTE---EC-TTCCHH
T ss_pred cCcEEEEEEEEeCCCccCEEEEcCCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCE---EC-CCCCHH
Confidence 345778999986 5999997643 459999999999999999449999999997642 23 222355
Q ss_pred hHHHHhhcccCceEEEEeecCCc
Q 026827 149 RTMYTIRQRVGPLLMKMQKRYGK 171 (232)
Q Consensus 149 ~t~~AIr~RsGpv~LkLeR~~~~ 171 (232)
++..+|+....++.|.+.|+-..
T Consensus 81 ~~~~~~~~~~~~v~l~v~R~~~~ 103 (107)
T 1uhp_A 81 QAVEAFKTAKEPIVVQVLRRTSG 103 (107)
T ss_dssp HHHHHHHHCCSSEEEEEEECCSS
T ss_pred HHHHHHHcCCCcEEEEEEeCCCC
Confidence 67777876567899999886543
No 25
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.54 E-value=4e-07 Score=66.15 Aligned_cols=78 Identities=21% Similarity=0.412 Sum_probs=59.7
Q ss_pred EEEEEecC----cceeEEeeeCC-----------CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccc--hh
Q 026827 86 EYEVEIEQ----PYGLKFAKGRD-----------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YG 148 (232)
Q Consensus 86 eyeVeL~K----PLGL~Fee~~d-----------GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~--~G 148 (232)
.|.|+|.| .||+.+....+ .+++|..|.+++.|+++|.|++||+|+++... +..+ +.
T Consensus 5 p~~v~l~~~~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~------~v~~~~~~ 78 (103)
T 2fcf_A 5 PRRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGM------DLRDASHE 78 (103)
T ss_dssp CEEEEECCCC-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTE------ECTTCCHH
T ss_pred CEEEEEEeCCCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCE------ECCCCCHH
Confidence 37777765 47888865422 58999999999999999999999999998742 2333 66
Q ss_pred hHHHHhhcccCceEEEEeecC
Q 026827 149 RTMYTIRQRVGPLLMKMQKRY 169 (232)
Q Consensus 149 ~t~~AIr~RsGpv~LkLeR~~ 169 (232)
++..+|+...+++.|++.|.-
T Consensus 79 ~~~~~l~~~~~~v~l~v~r~~ 99 (103)
T 2fcf_A 79 QAVEAIRKAGNPVVFMVQSII 99 (103)
T ss_dssp HHHHHHHTCCSSEEEEEECCC
T ss_pred HHHHHHHhCCCcEEEEEEECC
Confidence 778888876779999998853
No 26
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.53 E-value=5.8e-07 Score=64.58 Aligned_cols=81 Identities=28% Similarity=0.516 Sum_probs=61.2
Q ss_pred cEEEEEec---CcceeEEeeeC-----CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc
Q 026827 85 EEYEVEIE---QPYGLKFAKGR-----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (232)
Q Consensus 85 eeyeVeL~---KPLGL~Fee~~-----dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~ 156 (232)
+.|+|+|. .+||+.+..+. +.+++|..|.+++.|+++|.|++||+|+++... .+= ...+.++...++.
T Consensus 5 ~~~~v~l~k~~~~lG~~i~~g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~---~v~-~~~~~~~~~~l~~ 80 (96)
T 1d5g_A 5 DIFEVELAKNDNSLGISVTGGVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGV---SLE-GATHKQAVETLRN 80 (96)
T ss_dssp CEEEEEEECSSSSCCEEEECCSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTE---ECT-TCCHHHHHHHHHS
T ss_pred CEEEEEEEeCCCCCCEEEECCCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCE---ECC-CCCHHHHHHHHHc
Confidence 56778885 57899998653 359999999999999999999999999998642 111 1144566777776
Q ss_pred ccCceEEEEeecC
Q 026827 157 RVGPLLMKMQKRY 169 (232)
Q Consensus 157 RsGpv~LkLeR~~ 169 (232)
...++.|.+.|..
T Consensus 81 ~g~~v~l~v~R~~ 93 (96)
T 1d5g_A 81 TGQVVHLLLEKGQ 93 (96)
T ss_dssp CCSEEEEEEECCS
T ss_pred CCCeEEEEEEcCC
Confidence 4567899998854
No 27
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.52 E-value=4.2e-07 Score=66.75 Aligned_cols=84 Identities=21% Similarity=0.432 Sum_probs=62.7
Q ss_pred ccccEEEEEe--cC---cceeEEeee-------CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhh
Q 026827 82 EKYEEYEVEI--EQ---PYGLKFAKG-------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR 149 (232)
Q Consensus 82 ~~~eeyeVeL--~K---PLGL~Fee~-------~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~ 149 (232)
..++.++|+| ++ +||+.+... .+.+++|..|.+++.|+++|.|++||+|+++-.. .+-.. .+.+
T Consensus 9 ~~~~~~~v~l~r~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~---~v~~~-~~~~ 84 (108)
T 2jre_A 9 SGFSLYSVELFREKDTSSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDV---NVQGM-AQSD 84 (108)
T ss_dssp SSCEEEEEEEECCSTTSCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTE---ECTTS-CHHH
T ss_pred cCcEEEEEEEEecCCCCCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCE---ECCCC-CHHH
Confidence 4567899999 44 488999764 2459999999999999999999999999998743 22111 2456
Q ss_pred HHHHhhcccCceEEEEeecC
Q 026827 150 TMYTIRQRVGPLLMKMQKRY 169 (232)
Q Consensus 150 t~~AIr~RsGpv~LkLeR~~ 169 (232)
+..+|+....++.|.+.|.-
T Consensus 85 ~~~~l~~~g~~v~l~v~R~~ 104 (108)
T 2jre_A 85 VVEVLRNAGNPVRLLLIRRL 104 (108)
T ss_dssp HHHHHHHHCSEEEEEEEECC
T ss_pred HHHHHHcCCCeEEEEEEeCC
Confidence 66777764567899998843
No 28
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.51 E-value=3.5e-07 Score=67.92 Aligned_cols=82 Identities=13% Similarity=0.196 Sum_probs=62.2
Q ss_pred cEEEEEec---CcceeEEeeeC------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhh
Q 026827 85 EEYEVEIE---QPYGLKFAKGR------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155 (232)
Q Consensus 85 eeyeVeL~---KPLGL~Fee~~------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr 155 (232)
+.++|+|. ++||+.+..+. +.++||..|.+++.|+++|.|++||+|+++-.. .+-. ..+.++...|+
T Consensus 15 ~~~~v~l~k~~~glG~~i~~~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~---~v~~-~~~~~~~~~l~ 90 (108)
T 2d92_A 15 EVKIVELVKDCKGLGFSILDYQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEY---CLDN-TSLAEAVEILK 90 (108)
T ss_dssp SCEEEEEEECSSCCSEEEEEEECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSC---BCTT-CCHHHHHHHHH
T ss_pred ceEEEEEEECCCccCEEEecccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHH
Confidence 33566665 47899987643 358999999999999999999999999998742 3311 24567788888
Q ss_pred cc-cCceEEEEeecCC
Q 026827 156 QR-VGPLLMKMQKRYG 170 (232)
Q Consensus 156 ~R-sGpv~LkLeR~~~ 170 (232)
.. .+++.|++.|+..
T Consensus 91 ~~~~~~v~l~v~R~~~ 106 (108)
T 2d92_A 91 AVPPGLVHLGICSGPS 106 (108)
T ss_dssp HSCSEEEEEEEECCCC
T ss_pred hCCCCeEEEEEEcCCC
Confidence 64 4689999999763
No 29
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.51 E-value=5.1e-07 Score=68.60 Aligned_cols=85 Identities=14% Similarity=0.257 Sum_probs=64.8
Q ss_pred hccccEEEEEecCc---ceeEEeeeC--CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhh
Q 026827 81 EEKYEEYEVEIEQP---YGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155 (232)
Q Consensus 81 ~~~~eeyeVeL~KP---LGL~Fee~~--dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr 155 (232)
+...+.++|+|.|. +|+.+..+. +.++||..|.+++.|+++|.|++||+|+++-.. .+ ....+.++..+|+
T Consensus 15 ~~~~~~~~v~l~~~~~glG~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~---~v-~~~~~~~~~~~l~ 90 (123)
T 1ueq_A 15 QLKGTFLSTTLKKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEV---CV-LGHTHADVVKLFQ 90 (123)
T ss_dssp TCCSEEEEEEEECCTTSCSEEEECCSSSSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTE---EC-TTSCHHHHHHHHH
T ss_pred cCCCcEEEEEEEeCCCceeEEEecccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHH
Confidence 34557788998874 889888654 458999999999999999999999999998642 22 1114557778888
Q ss_pred cc--cCceEEEEeecC
Q 026827 156 QR--VGPLLMKMQKRY 169 (232)
Q Consensus 156 ~R--sGpv~LkLeR~~ 169 (232)
.. -.++.|++.|..
T Consensus 91 ~~~~g~~v~l~v~R~~ 106 (123)
T 1ueq_A 91 SVPIGQSVNLVLCRGY 106 (123)
T ss_dssp TSCTTCEEEEEEEESC
T ss_pred hCCCCCeEEEEEEeCC
Confidence 63 367999999865
No 30
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.51 E-value=3.3e-07 Score=70.41 Aligned_cols=81 Identities=21% Similarity=0.259 Sum_probs=63.6
Q ss_pred cEEEEEecC---cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc--ccC
Q 026827 85 EEYEVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ--RVG 159 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~--RsG 159 (232)
+..+|+|.| |||+.+..+.+|.+||..|.+||-|+++|.|.+||.|+.|-.. .|.- ....++...++. .-.
T Consensus 5 ~~k~V~l~K~~~~LG~tI~~~g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~---~v~g-~~h~evv~lLk~~~~g~ 80 (95)
T 3gge_A 5 IEKEVNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGDHIESINGE---NIVG-WRHYDVAKKLKELKKEE 80 (95)
T ss_dssp EEEEEEEECCSSCCCEEEECSSSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTE---ECTT-CCHHHHHHHHHHSCTTC
T ss_pred eEEEEEEEECCCCceEEEEcCCCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCE---EccC-CCHHHHHHHHHhCCCCC
Confidence 456788876 9999998666789999999999999999999999999998763 2211 133467778885 335
Q ss_pred ceEEEEeecC
Q 026827 160 PLLMKMQKRY 169 (232)
Q Consensus 160 pv~LkLeR~~ 169 (232)
+++|+|-+|-
T Consensus 81 ~~~L~lv~p~ 90 (95)
T 3gge_A 81 LFTMKLIEPK 90 (95)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEECcc
Confidence 7899998874
No 31
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.51 E-value=5e-07 Score=68.28 Aligned_cols=81 Identities=16% Similarity=0.232 Sum_probs=62.5
Q ss_pred EEEEEecC----cceeEEeeeCC---CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhccc
Q 026827 86 EYEVEIEQ----PYGLKFAKGRD---GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (232)
Q Consensus 86 eyeVeL~K----PLGL~Fee~~d---GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~Rs 158 (232)
.++|+|.| +||+.+....+ +++||..|.+++.|+++|.|++||+|+++... .+ ....+.++...|+...
T Consensus 16 ~~~v~l~k~~~~~lG~~i~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~---~v-~~~~~~~~~~~l~~~g 91 (117)
T 1v62_A 16 PLMVEIVKTPGSALGISLTTTSLRNKSVITIDRIKPASVVDRSGALHPGDHILSIDGT---SM-EHCSLLEATKLLASIS 91 (117)
T ss_dssp SEEEEEECCTTCCCCCEEEEECCSSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTE---ET-TSCCHHHHHHHHHSCS
T ss_pred cEEEEEEcCCCCcccEEEEccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHhCC
Confidence 46677776 68899987643 46999999999999999999999999998742 22 1134567778888656
Q ss_pred CceEEEEeecCC
Q 026827 159 GPLLMKMQKRYG 170 (232)
Q Consensus 159 Gpv~LkLeR~~~ 170 (232)
..+.|++.|..-
T Consensus 92 ~~v~l~v~r~~~ 103 (117)
T 1v62_A 92 EKVRLEILPVPQ 103 (117)
T ss_dssp SEEEEEECCBTT
T ss_pred CeEEEEEEECCC
Confidence 788999998654
No 32
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.49 E-value=6.1e-07 Score=65.96 Aligned_cols=82 Identities=24% Similarity=0.426 Sum_probs=61.1
Q ss_pred cEEEEEecC---cceeEEeeeCC-------CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHh
Q 026827 85 EEYEVEIEQ---PYGLKFAKGRD-------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~d-------GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AI 154 (232)
+.++|+|.| ++|+.+..+.+ .+++|..|.+++.|+++|.|++||+|+++... .+-. ..+-++...+
T Consensus 3 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~---~v~~-~~~~~~~~~~ 78 (105)
T 2awx_A 3 KIMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSV---SLEE-VTHEEAVTAL 78 (105)
T ss_dssp CEEEEEEECBTTBSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ECTT-CBHHHHHHHH
T ss_pred eEEEEEEEECCCCCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCE---ECCC-CCHHHHHHHH
Confidence 346677754 78999986532 49999999999999999999999999998642 2211 2344666677
Q ss_pred hcccCceEEEEeecCC
Q 026827 155 RQRVGPLLMKMQKRYG 170 (232)
Q Consensus 155 r~RsGpv~LkLeR~~~ 170 (232)
+....++.|.+.|...
T Consensus 79 ~~~~~~v~l~v~R~~~ 94 (105)
T 2awx_A 79 KNTSDFVYLKVAKPTS 94 (105)
T ss_dssp HSCCSEEEEEEECCCC
T ss_pred HcCCCeEEEEEEcCCC
Confidence 7655788999998654
No 33
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.49 E-value=7.1e-07 Score=63.58 Aligned_cols=78 Identities=15% Similarity=0.376 Sum_probs=60.2
Q ss_pred EEEEecC---cceeEEeeeCC-CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccch--hhHHHHhhcccCc
Q 026827 87 YEVEIEQ---PYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEY--GRTMYTIRQRVGP 160 (232)
Q Consensus 87 yeVeL~K---PLGL~Fee~~d-GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~--G~t~~AIr~RsGp 160 (232)
..|+|.| ++|+.+....+ .+++|..|.+++.|+++| |++||+|+++-.. +...+ .++..+|+....+
T Consensus 6 r~v~l~k~~~g~G~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~------~v~~~~~~~~~~~l~~~~~~ 78 (90)
T 2he4_A 6 RLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQ------NVEGLRHAEVVASIKAREDE 78 (90)
T ss_dssp EEEEEECBTTBCCEEEEECSSSSSEEEEEECTTSHHHHHT-CCTTCEEEEETTE------ECTTSCHHHHHHHHTTSSSE
T ss_pred EEEEEEECCCCccEEEEccCCCCCEEEEEECCCChHHHCC-CCCCCEEEEECCE------ECCCCCHHHHHHHHHcCCCc
Confidence 4566664 48888887654 589999999999999999 9999999998643 23333 5677788876678
Q ss_pred eEEEEeecCCc
Q 026827 161 LLMKMQKRYGK 171 (232)
Q Consensus 161 v~LkLeR~~~~ 171 (232)
+.|.+.|+-.+
T Consensus 79 v~l~v~r~~~~ 89 (90)
T 2he4_A 79 ARLLVVGPSTR 89 (90)
T ss_dssp EEEEEECCCCC
T ss_pred EEEEEEccCCC
Confidence 99999986543
No 34
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.49 E-value=4.7e-07 Score=64.15 Aligned_cols=75 Identities=24% Similarity=0.466 Sum_probs=58.3
Q ss_pred EEEEecC--cceeEEeeeCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccc--hhhHHHHhhcccCc
Q 026827 87 YEVEIEQ--PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRTMYTIRQRVGP 160 (232)
Q Consensus 87 yeVeL~K--PLGL~Fee~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~--~G~t~~AIr~RsGp 160 (232)
+.|+++. ++|+.+..+.+ .+++|..|.|++.|+++| |++||+|+++... +... +.++...|+....+
T Consensus 4 ~~v~~~~~~~lG~~l~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~------~v~~~~~~~~~~~l~~~~~~ 76 (87)
T 2pa1_A 4 LTVDVAGPAPWGFRITGGRDFHTPIMVTKVAERGKAKDAD-LRPGDIIVAINGE------SAEGMLHAEAQSKIRQSPSP 76 (87)
T ss_dssp EEEEECSSSCCSEEEEEEGGGTEEEEEEEECSSSHHHHTT-CCTTCEEEEETTE------ESTTCCHHHHHHHHHTCCSS
T ss_pred EEEEECCCCccCEEEecccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCE------ECCCCCHHHHHHHHHcCCCe
Confidence 4455544 78899987654 489999999999999999 9999999998643 2333 56777778765589
Q ss_pred eEEEEeec
Q 026827 161 LLMKMQKR 168 (232)
Q Consensus 161 v~LkLeR~ 168 (232)
+.|.+.|.
T Consensus 77 v~l~v~R~ 84 (87)
T 2pa1_A 77 LRLQLDRI 84 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 99999884
No 35
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.48 E-value=6.4e-07 Score=67.05 Aligned_cols=82 Identities=21% Similarity=0.422 Sum_probs=60.5
Q ss_pred cccEEEEEecC---cceeEEeeeC--CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc
Q 026827 83 KYEEYEVEIEQ---PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (232)
Q Consensus 83 ~~eeyeVeL~K---PLGL~Fee~~--dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R 157 (232)
+.+.++|+|.| ++|+.+..+. +.+++|..|.+++.|+++|.|++||+|+++... .+=. ..+.++...++..
T Consensus 22 ~~~~~~v~l~~~~~glG~~l~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~---~v~~-~~~~~~~~~l~~~ 97 (112)
T 2r4h_A 22 SMDFYTVELERGAKGFGFSLRGGREYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGE---TTKN-MKHSRAIELIKNG 97 (112)
T ss_dssp -CCEEEEEEECBTTBTSEEEEECGGGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTE---ECTT-CCHHHHHHHHHTT
T ss_pred CCceEEEEEEcCCCccCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHcC
Confidence 34567888866 5889887654 459999999999999999999999999998742 2311 1344566677654
Q ss_pred cCceEEEEeec
Q 026827 158 VGPLLMKMQKR 168 (232)
Q Consensus 158 sGpv~LkLeR~ 168 (232)
..++.|.+.|.
T Consensus 98 g~~v~l~v~R~ 108 (112)
T 2r4h_A 98 GRRVRLFLKRG 108 (112)
T ss_dssp TTEEEEEEECC
T ss_pred CCeEEEEEEeC
Confidence 46788999874
No 36
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.48 E-value=4.5e-07 Score=64.61 Aligned_cols=80 Identities=19% Similarity=0.323 Sum_probs=60.1
Q ss_pred cEEEEEecC----cceeEEeeeCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhccc
Q 026827 85 EEYEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (232)
Q Consensus 85 eeyeVeL~K----PLGL~Fee~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~Rs 158 (232)
+.++|+|.| ++|+.+..+.+ .+++|..|.+++.|+++|.|++||+|+++... .+=. ..+.++...++...
T Consensus 4 ~~~~v~l~k~~~~~lG~~i~~~~~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~---~v~~-~~~~~~~~~~~~~~ 79 (90)
T 1qav_A 4 QRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGE---DLSS-ATHDEAVQALKKTG 79 (90)
T ss_dssp SCEEEEEECCTTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTE---ECTT-CCHHHHHHHHHTCC
T ss_pred ccEEEEEEeCCCCCcCEEEEcccCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHhCC
Confidence 347888877 68999987643 48999999999999999449999999998742 2211 13456677777656
Q ss_pred CceEEEEeec
Q 026827 159 GPLLMKMQKR 168 (232)
Q Consensus 159 Gpv~LkLeR~ 168 (232)
.++.|.+.|.
T Consensus 80 ~~v~l~v~r~ 89 (90)
T 1qav_A 80 KEVVLEVKYM 89 (90)
T ss_dssp SEEEEEEEEC
T ss_pred CeEEEEEEEe
Confidence 7788988873
No 37
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.48 E-value=7.4e-07 Score=65.93 Aligned_cols=82 Identities=23% Similarity=0.394 Sum_probs=61.2
Q ss_pred cEEEEEecC---cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCce
Q 026827 85 EEYEVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv 161 (232)
+..+|+|.| ++|+.+..+.+.+++|..|.+++.|+++|.|++||+|+++... .+= ...+.++...|+.....+
T Consensus 15 ~~~~v~l~~~~~~lG~~l~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~---~v~-~~~~~~~~~~l~~~g~~v 90 (111)
T 2dlu_A 15 HVEEVELINDGSGLGFGIVGGKTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGT---NVQ-GMTSEQVAQVLRNCGNSV 90 (111)
T ss_dssp EEEEEEEECCSSCCCEEEECCSSSSBEEEEECTTSSHHHHTCCCSSCEEEEESSC---CCT-TSCHHHHHHHHHHHCSEE
T ss_pred ceEEEEEEeCCCccCEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECC-CCCHHHHHHHHHhCCCeE
Confidence 446667654 6899998777789999999999999999999999999998742 221 112345566666544678
Q ss_pred EEEEeecCC
Q 026827 162 LMKMQKRYG 170 (232)
Q Consensus 162 ~LkLeR~~~ 170 (232)
.|.+.|...
T Consensus 91 ~l~v~R~~~ 99 (111)
T 2dlu_A 91 RMLVARDPA 99 (111)
T ss_dssp EEEEEESCT
T ss_pred EEEEEeCCC
Confidence 999988543
No 38
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.47 E-value=4.1e-07 Score=69.21 Aligned_cols=86 Identities=17% Similarity=0.275 Sum_probs=65.1
Q ss_pred ccEEEEEecC----cceeEEeeeCC-----CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHh
Q 026827 84 YEEYEVEIEQ----PYGLKFAKGRD-----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (232)
Q Consensus 84 ~eeyeVeL~K----PLGL~Fee~~d-----GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AI 154 (232)
.+...|+|.| +||+.+..+.+ .++||..|.+++.|+++|.|++||+|+++.. ..+.....+.++..+|
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~g~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing---~~v~~~~~~~~~~~~l 100 (128)
T 2db5_A 24 RQIEYIDIERPSTGGLGFSVVALRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINH---TPLDQNISHQQAIALL 100 (128)
T ss_dssp CEEEEEEEECCSSSCCCCEEEEEECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESS---CBCSTTSCHHHHHHHH
T ss_pred CceEEEEEEECCCCccCEEEecccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EECCCCCCHHHHHHHH
Confidence 3556677765 47888875433 2899999999999999999999999999874 2443123666778888
Q ss_pred hcccCceEEEEeecCCcc
Q 026827 155 RQRVGPLLMKMQKRYGKM 172 (232)
Q Consensus 155 r~RsGpv~LkLeR~~~~~ 172 (232)
+.....|.|.+.|.....
T Consensus 101 ~~~~~~v~l~v~r~~~~~ 118 (128)
T 2db5_A 101 QQTTGSLRLIVAREPVHT 118 (128)
T ss_dssp HHCCSEEEEEEEECCCSS
T ss_pred HcCCCeEEEEEEcCCCCC
Confidence 875678899999976543
No 39
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.47 E-value=2e-06 Score=64.34 Aligned_cols=83 Identities=24% Similarity=0.384 Sum_probs=63.0
Q ss_pred cEEEEEecC----cceeEEeeeCC-----------CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhh
Q 026827 85 EEYEVEIEQ----PYGLKFAKGRD-----------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR 149 (232)
Q Consensus 85 eeyeVeL~K----PLGL~Fee~~d-----------GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~ 149 (232)
..+.|+|.| +||+.+..+.+ .++||..|.+++.|+++|.|++||+|+++... .+-.. .+-+
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~---~v~~~-~~~~ 90 (117)
T 2ehr_A 15 PPRIVEIFREPNVSLGISIVGGQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGV---DLQNA-SHSE 90 (117)
T ss_dssp CCEEEEECCCSSSCCCEEECCCCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSC---BCTTC-CHHH
T ss_pred CCEEEEEEeCCCCccCEEEeCCcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCE---ECCCC-CHHH
Confidence 447788765 47888866542 49999999999999999999999999998742 33222 2456
Q ss_pred HHHHhhcccCceEEEEeecCCc
Q 026827 150 TMYTIRQRVGPLLMKMQKRYGK 171 (232)
Q Consensus 150 t~~AIr~RsGpv~LkLeR~~~~ 171 (232)
+..+|+....++.|.+.|....
T Consensus 91 ~~~~~~~~g~~v~l~v~r~~~~ 112 (117)
T 2ehr_A 91 AVEAIKNAGNPVVFIVQSLSST 112 (117)
T ss_dssp HHHHHHTSCSSEEEEECCBSCC
T ss_pred HHHHHHcCCCeEEEEEEECCCC
Confidence 7777877567899999987654
No 40
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.47 E-value=5.2e-07 Score=69.41 Aligned_cols=83 Identities=22% Similarity=0.396 Sum_probs=62.1
Q ss_pred ccEEEEEec-C---cceeEEeeeCC------CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHH
Q 026827 84 YEEYEVEIE-Q---PYGLKFAKGRD------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYT 153 (232)
Q Consensus 84 ~eeyeVeL~-K---PLGL~Fee~~d------GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~A 153 (232)
...++|+|. + +||+.+....+ .++||..|.++|.|+++|.|++||+|++|-.. .+-. ..+.+++..
T Consensus 24 ~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~---~v~~-~~~~~~~~~ 99 (127)
T 1wg6_A 24 QLTLEIPLNDSGSAGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGE---TLLG-KSNHEAMET 99 (127)
T ss_dssp EEEEEEECSSSTTTCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTE---ESTT-SCHHHHHHH
T ss_pred ceEEEEEEeeCCCCccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCE---ECCC-CCHHHHHHH
Confidence 345777776 3 59999987643 48999999999999999999999999998742 2211 134467777
Q ss_pred hhcc-------cCceEEEEeecCC
Q 026827 154 IRQR-------VGPLLMKMQKRYG 170 (232)
Q Consensus 154 Ir~R-------sGpv~LkLeR~~~ 170 (232)
|+.. ..+|.|++.|...
T Consensus 100 l~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 100 LRRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHHHHHHHHHTCEEEEEEEECSC
T ss_pred HHHhhccccCCCCEEEEEEEeCCC
Confidence 7753 5789999998654
No 41
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.46 E-value=6.9e-07 Score=64.09 Aligned_cols=80 Identities=26% Similarity=0.462 Sum_probs=58.6
Q ss_pred ccEEEEEecCc---ceeEEeee--------CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHH
Q 026827 84 YEEYEVEIEQP---YGLKFAKG--------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMY 152 (232)
Q Consensus 84 ~eeyeVeL~KP---LGL~Fee~--------~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~ 152 (232)
+++|.|++.|. ||+.+..+ .+.+++|..|.+++.|+++| |++||+|+++... .+-....+ ....
T Consensus 2 ~~~~~v~~~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~---~v~~~~~~-~~~~ 76 (97)
T 2w4f_A 2 MEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGV---ALQGAEHH-EAVE 76 (97)
T ss_dssp -CEEEEEEECBTTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTE---ECTTCCHH-HHHH
T ss_pred ceEEEEEEEeCCCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCE---ECCCcCHH-HHHH
Confidence 46788888775 77888764 24699999999999999999 9999999998753 33333233 2334
Q ss_pred HhhcccCceEEEEeec
Q 026827 153 TIRQRVGPLLMKMQKR 168 (232)
Q Consensus 153 AIr~RsGpv~LkLeR~ 168 (232)
.++....++.|.+.|.
T Consensus 77 ~~~~~g~~v~l~v~R~ 92 (97)
T 2w4f_A 77 ALRGAGTAVQMRVWRE 92 (97)
T ss_dssp HHHTSCSEEEEEEECC
T ss_pred HHhCCCCeEEEEEEeC
Confidence 5555456889999884
No 42
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.46 E-value=1.9e-07 Score=69.69 Aligned_cols=83 Identities=14% Similarity=0.262 Sum_probs=64.2
Q ss_pred ccEEEEEecCc----ceeEEeeeC-----CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHh
Q 026827 84 YEEYEVEIEQP----YGLKFAKGR-----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (232)
Q Consensus 84 ~eeyeVeL~KP----LGL~Fee~~-----dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AI 154 (232)
...+.|+|.|+ ||+.+..+. +.++||..|.+++.|+++|.|++||+|+++... .+.....+.++..+|
T Consensus 19 ~~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~---~v~~~~~~~~~~~~l 95 (117)
T 2o2t_A 19 RHVEVFELLKPPSGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQ---ALDQTITHQQAISIL 95 (117)
T ss_dssp SCEEEEEEECCSSSCSSCCEEEEECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTE---ECCTTSCHHHHHHHH
T ss_pred CeEEEEEEEECCCCCCCEEEeecccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCE---ECCCCCCHHHHHHHH
Confidence 46688898886 788887653 348999999999999999999999999998742 332122566777788
Q ss_pred hcccCceEEEEeecC
Q 026827 155 RQRVGPLLMKMQKRY 169 (232)
Q Consensus 155 r~RsGpv~LkLeR~~ 169 (232)
+.....+.|.+.|.-
T Consensus 96 ~~~~~~v~l~v~R~~ 110 (117)
T 2o2t_A 96 QKAKDTVQLVIARGS 110 (117)
T ss_dssp HHCCSEEEEEEESSC
T ss_pred HcCCCEEEEEEEeCC
Confidence 765678899998853
No 43
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.45 E-value=1.2e-06 Score=63.53 Aligned_cols=81 Identities=23% Similarity=0.394 Sum_probs=60.3
Q ss_pred cEEEEEecC---cceeEEeeeC-------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHh
Q 026827 85 EEYEVEIEQ---PYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~-------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AI 154 (232)
...+|+|.| ++|+.+..+. +.+++|..|.+++.|+++|.|++||+|+++-.. .+=. ..+.++...+
T Consensus 7 ~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~---~v~~-~~~~~~~~~~ 82 (101)
T 2jik_A 7 TEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQ---DLKN-LLHQDAVDLF 82 (101)
T ss_dssp EEEEEEEECCTTCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ECSS-CCHHHHHHHH
T ss_pred ccEEEEEEeCCCCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCE---ECCC-CCHHHHHHHH
Confidence 557777765 6889998764 359999999999999999999999999998642 2211 1234566677
Q ss_pred hcccCceEEEEeecC
Q 026827 155 RQRVGPLLMKMQKRY 169 (232)
Q Consensus 155 r~RsGpv~LkLeR~~ 169 (232)
+.....+.|.+.|..
T Consensus 83 ~~~g~~v~l~v~R~~ 97 (101)
T 2jik_A 83 RNAGYAVSLRVQHRL 97 (101)
T ss_dssp HTCCSEEEEEEEEES
T ss_pred HhCCCeEEEEEEeCC
Confidence 654557899998853
No 44
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.45 E-value=9.9e-07 Score=65.14 Aligned_cols=80 Identities=19% Similarity=0.333 Sum_probs=61.4
Q ss_pred cEEEEEecC----cceeEEeeeCC-CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccc--hhhHHHHhhcc
Q 026827 85 EEYEVEIEQ----PYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRTMYTIRQR 157 (232)
Q Consensus 85 eeyeVeL~K----PLGL~Fee~~d-GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~--~G~t~~AIr~R 157 (232)
+.|+|+|.| .+|+.+....+ ++++|..|.+++.|+++|.|++||+|+++... +... +.++..+|+..
T Consensus 1 n~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~------~v~~~~~~~~~~~l~~~ 74 (112)
T 1qau_A 1 NVISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDR------PLVDLSYDSALEVLRGI 74 (112)
T ss_dssp CEEEEEEECBTTTBTSEEEEECSSSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTE------ECTTSCHHHHHHHHHHS
T ss_pred CEEEEEEEcCCCCceeEEEEecCCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCE------ECCCCCHHHHHHHHHhC
Confidence 357888844 58999987653 49999999999999999966999999998742 2233 56677777754
Q ss_pred c-CceEEEEeecCC
Q 026827 158 V-GPLLMKMQKRYG 170 (232)
Q Consensus 158 s-Gpv~LkLeR~~~ 170 (232)
. .++.|.+.|.-.
T Consensus 75 ~g~~v~l~v~R~g~ 88 (112)
T 1qau_A 75 ASETHVVLILRGPE 88 (112)
T ss_dssp CSSSEEEEEEECCT
T ss_pred CCCcEEEEEEeCCc
Confidence 4 688999998543
No 45
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.44 E-value=1.1e-06 Score=62.73 Aligned_cols=80 Identities=26% Similarity=0.456 Sum_probs=58.9
Q ss_pred cEEEEEecC---cceeEEeeeC-------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHh
Q 026827 85 EEYEVEIEQ---PYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~-------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AI 154 (232)
+.++|+|.| ++|+.+..+. +.+++|..|.+++.|+++|.|++||+|+++-.. .+-. ..+.++...+
T Consensus 3 ~~~~v~l~k~~~g~G~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~---~v~~-~~~~~~~~~~ 78 (94)
T 2fe5_A 3 TIMEVNLLKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNT---NLQD-VRHEEAVASL 78 (94)
T ss_dssp CEEEEEEECCTTCSCEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ECTT-CBHHHHHHHH
T ss_pred EEEEEEEEECCCCCCEEEEcccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE---ECCC-CCHHHHHHHH
Confidence 346677754 6899998642 348999999999999999999999999998642 2211 1344566677
Q ss_pred hcccCceEEEEeec
Q 026827 155 RQRVGPLLMKMQKR 168 (232)
Q Consensus 155 r~RsGpv~LkLeR~ 168 (232)
+...+++.|.+.|.
T Consensus 79 ~~~~~~v~l~v~R~ 92 (94)
T 2fe5_A 79 KNTSDMVYLKVAKP 92 (94)
T ss_dssp HTCCSEEEEEEECC
T ss_pred HcCCCeEEEEEEcC
Confidence 75556889998873
No 46
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.44 E-value=8.6e-07 Score=64.66 Aligned_cols=81 Identities=21% Similarity=0.321 Sum_probs=61.9
Q ss_pred EEEEEecCc---ceeEEeeeC-CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCce
Q 026827 86 EYEVEIEQP---YGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (232)
Q Consensus 86 eyeVeL~KP---LGL~Fee~~-dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv 161 (232)
...|+|.|. +|+.+.... ..+++|..|.+++.|+++| |++||+|+++... .+-.. .+.++...|+....++
T Consensus 7 ~r~v~l~k~~~g~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~---~v~~~-~~~~~~~~l~~~g~~v 81 (102)
T 2d90_A 7 GRVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGK---SVEAL-DHDGVVEMIRKGGDQT 81 (102)
T ss_dssp SEEEEEECCSSSSSCEEEECSSSSSEEEECCCTTSTTTTTT-CCTTCEEEEESSC---BCTTS-CHHHHHHHHHHSTTEE
T ss_pred CEEEEEeeCCCCccEEEEeecCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHcCCCEE
Confidence 367777775 889998754 3599999999999999999 9999999998743 33222 2456677777656788
Q ss_pred EEEEeecCCc
Q 026827 162 LMKMQKRYGK 171 (232)
Q Consensus 162 ~LkLeR~~~~ 171 (232)
.|.+.|+-+.
T Consensus 82 ~l~v~r~~~~ 91 (102)
T 2d90_A 82 TLLVLDKEAE 91 (102)
T ss_dssp EEEECSTTCC
T ss_pred EEEEEECCCc
Confidence 9999887654
No 47
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.42 E-value=1.1e-06 Score=66.78 Aligned_cols=80 Identities=24% Similarity=0.408 Sum_probs=60.9
Q ss_pred cEEEEEecC---cceeEEeeeC-------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHh
Q 026827 85 EEYEVEIEQ---PYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~-------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AI 154 (232)
+..+|+|.| .+|+.+..+. +.+++|..|.++|.|+++|.|++||+|+++... .+-. ....++...|
T Consensus 24 ~~~~v~l~k~~~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~---~v~~-~~~~~~~~~l 99 (117)
T 2byg_A 24 TVVEIKLFKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNY---SLEE-VTHEEAVAIL 99 (117)
T ss_dssp EEEEEEEECBTTBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ECTT-CCHHHHHHHH
T ss_pred ceEEEEEEeCCCCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECCC-CCHHHHHHHH
Confidence 445666654 7889998653 358999999999999999999999999998742 2221 1455777788
Q ss_pred hcccCceEEEEeec
Q 026827 155 RQRVGPLLMKMQKR 168 (232)
Q Consensus 155 r~RsGpv~LkLeR~ 168 (232)
+.....|.|++.|.
T Consensus 100 ~~~g~~v~l~v~R~ 113 (117)
T 2byg_A 100 KNTSEVVYLKVGKP 113 (117)
T ss_dssp HTCCSEEEEEEEEE
T ss_pred HcCCCeEEEEEEeC
Confidence 86567889999884
No 48
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.42 E-value=3.8e-07 Score=66.20 Aligned_cols=77 Identities=21% Similarity=0.361 Sum_probs=60.9
Q ss_pred EEEEecC----cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceE
Q 026827 87 YEVEIEQ----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (232)
Q Consensus 87 yeVeL~K----PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~ 162 (232)
..|+|.| +||+.+.. .+++++|..|.+++.|+++|.+++||+|+++.. ..+ ...+.++...|+...+++.
T Consensus 8 r~v~l~k~~~~~lG~~i~~-~~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing---~~v--~~~~~~~~~~l~~~~~~v~ 81 (91)
T 2e7k_A 8 RMVGIRKTAGEHLGVTFRV-EGGELVIARILHGGMVAQQGLLHVGDIIKEVNG---QPV--GSDPRALQELLRNASGSVI 81 (91)
T ss_dssp CBCCBCCCTTCCCCEEEEE-SSSSEEEEEECSSSHHHHHCCCCTTCEEEEETT---EEC--TTCHHHHHHHHHTCCSSBC
T ss_pred EEEEEEECCCCcEeEEEEe-cCCCEEEEEECCCCHHHHcCCCCCCCEEEEECC---EEC--CCCHHHHHHHHHcCCCeEE
Confidence 3466654 79999987 467999999999999999988999999999864 244 2456677788886667899
Q ss_pred EEEeecC
Q 026827 163 MKMQKRY 169 (232)
Q Consensus 163 LkLeR~~ 169 (232)
|.+.|.+
T Consensus 82 l~v~~~~ 88 (91)
T 2e7k_A 82 LKILSGP 88 (91)
T ss_dssp EEEECCS
T ss_pred EEEEECC
Confidence 9988754
No 49
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.42 E-value=7.9e-07 Score=66.49 Aligned_cols=87 Identities=22% Similarity=0.389 Sum_probs=64.2
Q ss_pred hhccccEEEEEecCc---ceeEEeeeCC-CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhh
Q 026827 80 QEEKYEEYEVEIEQP---YGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155 (232)
Q Consensus 80 ~~~~~eeyeVeL~KP---LGL~Fee~~d-GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr 155 (232)
++.+.+..+|+|.|+ ||+.+....+ .+++|..|.+++.|+++|.|++||+|+++... .+-... .-.....++
T Consensus 9 ~~~~~~~~~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~---~v~~~~-~~~~~~~~~ 84 (119)
T 1tp5_A 9 EDIPREPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGV---DLRNAS-HEQAAIALK 84 (119)
T ss_dssp SCCCCSCEEEEEECTTSCCCEEEEECGGGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTE---ECTTCC-HHHHHHHHH
T ss_pred CCCCCccEEEEEEECCCCccEEEecCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECCCCC-HHHHHHHHH
Confidence 445667789999876 8999987654 59999999999999999999999999998742 332221 123444555
Q ss_pred cccCceEEEEeecCC
Q 026827 156 QRVGPLLMKMQKRYG 170 (232)
Q Consensus 156 ~RsGpv~LkLeR~~~ 170 (232)
....++.|.+.|+..
T Consensus 85 ~~~~~v~l~v~r~~~ 99 (119)
T 1tp5_A 85 NAGQTVTIIAQYKPE 99 (119)
T ss_dssp TSCSEEEEEEEECHH
T ss_pred cCCCeEEEEEEECCc
Confidence 545678999988543
No 50
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.42 E-value=5e-07 Score=67.14 Aligned_cols=84 Identities=20% Similarity=0.369 Sum_probs=63.2
Q ss_pred cEEEEEec---CcceeEEeeeCC---CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhccc
Q 026827 85 EEYEVEIE---QPYGLKFAKGRD---GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (232)
Q Consensus 85 eeyeVeL~---KPLGL~Fee~~d---GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~Rs 158 (232)
+.+.|+|. .+||+.+..+.+ ++++|..|.+++.|+++|.|++||+|+++... .+-.. .+.++...|+...
T Consensus 17 ~~~~v~l~~~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~---~v~~~-~~~~~~~~l~~~~ 92 (116)
T 2dm8_A 17 QEMIIEISKGRSGLGLSIVGGKDTPLNAIVIHEVYEEGAAARDGRLWAGDQILEVNGV---DLRNS-SHEEAITALRQTP 92 (116)
T ss_dssp SCEEEEEECCSSCCCCCCBCCTTSSCSSEECCCCCSSSHHHHHTCCCTTCEEEEETTE---ECSSS-CHHHHHHHHHTCC
T ss_pred CEEEEEEEECCCcccEEEeCCCCCCcCCEEEEEECCCChHHhCCCCCCCCEEEEECCE---ECCCC-CHHHHHHHHHhCC
Confidence 34777775 468899887655 69999999999999999999999999998642 22111 2556677777555
Q ss_pred CceEEEEeecCCcc
Q 026827 159 GPLLMKMQKRYGKM 172 (232)
Q Consensus 159 Gpv~LkLeR~~~~~ 172 (232)
.++.|.+.|.-...
T Consensus 93 ~~v~l~v~R~~~~~ 106 (116)
T 2dm8_A 93 QKVRLVVYRDEAHY 106 (116)
T ss_dssp SEEEEEEECCSSCC
T ss_pred CeEEEEEEeCCccc
Confidence 78999998855443
No 51
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.42 E-value=8.2e-07 Score=63.07 Aligned_cols=80 Identities=19% Similarity=0.378 Sum_probs=57.8
Q ss_pred cEEEEEecC---cceeEEeeeC--CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhccc-
Q 026827 85 EEYEVEIEQ---PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV- 158 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~--dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~Rs- 158 (232)
++.+|+|.| .+|+.+..+. +.+++|..|.+++.|+++|.|++||+|+++... .+ .-....++...|+...
T Consensus 2 ~~~~v~l~~~~~g~G~~~~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~---~v-~~~~~~~~~~~l~~~~~ 77 (90)
T 2q9v_A 2 MEQDIFLWRKETGFGFRILGGNEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGT---PV-IGKSHQLVVQLMQQAAK 77 (90)
T ss_dssp EEEEEEEECBTTBCCEEEEECSSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---EC-TTSCHHHHHHHHHHHHH
T ss_pred CcEEEEEEECCCccCEEEEccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHhCCC
Confidence 456677665 4788887653 237999999999999999999999999998743 22 1123446666776543
Q ss_pred -CceEEEEeec
Q 026827 159 -GPLLMKMQKR 168 (232)
Q Consensus 159 -Gpv~LkLeR~ 168 (232)
+++.|.+.|.
T Consensus 78 ~~~v~l~v~R~ 88 (90)
T 2q9v_A 78 QGHVNLTVRQT 88 (90)
T ss_dssp HTEEEEEEEEC
T ss_pred CCeEEEEEEec
Confidence 3799998874
No 52
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.42 E-value=1.3e-06 Score=64.37 Aligned_cols=83 Identities=14% Similarity=0.322 Sum_probs=62.2
Q ss_pred cccEEEEEecC---cceeEEeeeCC-----CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHh
Q 026827 83 KYEEYEVEIEQ---PYGLKFAKGRD-----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (232)
Q Consensus 83 ~~eeyeVeL~K---PLGL~Fee~~d-----GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AI 154 (232)
..+.+.+++.| ++|+.+....+ .+++|..|.+++.|+++|.|++||+|+++-.. .+-. ..+.++...|
T Consensus 9 ~~~~~~~~l~~~~~glG~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~---~v~~-~~~~~~~~~l 84 (111)
T 2koj_A 9 VGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGV---DLAG-KSQEEVVSLL 84 (111)
T ss_dssp SCEEEEEEEECBTTBTCEEEEECSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTE---ECTT-SCHHHHHHHH
T ss_pred cCcEEEEEEEECCCccCEEEEeccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCE---ECCC-CCHHHHHHHH
Confidence 34678888865 68999987643 58999999999999999989999999998743 3311 1245566777
Q ss_pred hcc--cCceEEEEeecC
Q 026827 155 RQR--VGPLLMKMQKRY 169 (232)
Q Consensus 155 r~R--sGpv~LkLeR~~ 169 (232)
+.. ..++.|.+.|.-
T Consensus 85 ~~~~~g~~v~l~v~R~~ 101 (111)
T 2koj_A 85 RSTKMEGTVSLLVFRQE 101 (111)
T ss_dssp HHCCCSSEEEEEEEECC
T ss_pred HhCCCCCeEEEEEEeCC
Confidence 753 467899998853
No 53
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.41 E-value=1.5e-06 Score=64.20 Aligned_cols=80 Identities=25% Similarity=0.448 Sum_probs=61.2
Q ss_pred cEEEEEecC---cceeEEeeeC-----CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc
Q 026827 85 EEYEVEIEQ---PYGLKFAKGR-----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~-----dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~ 156 (232)
+.++|+|.| .+|+.+..+. +.+++|..|.+++.|+++|.|++||+|+++... .+=. ..+-++..+++.
T Consensus 8 ~~~~v~l~~~~~glG~~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~---~v~~-~~~~~~~~~~~~ 83 (110)
T 1um1_A 8 YVFTVELERGPSGLGMGLIDGMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGS---SLLG-LGYLRAVDLIRH 83 (110)
T ss_dssp CEEEEEEECCTTCCCEEEEETTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSC---BCSS-CCHHHHHHHHHT
T ss_pred cEEEEEEEECCCccCEEEeCCcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHc
Confidence 668888865 5889998753 348999999999999999999999999998642 2211 134456667776
Q ss_pred ccCceEEEEeec
Q 026827 157 RVGPLLMKMQKR 168 (232)
Q Consensus 157 RsGpv~LkLeR~ 168 (232)
...++.|.+.|.
T Consensus 84 ~~~~v~l~v~R~ 95 (110)
T 1um1_A 84 GGKKMRFLVAKS 95 (110)
T ss_dssp CCSEEEEEEECC
T ss_pred CCCeEEEEEEeC
Confidence 567789999884
No 54
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.41 E-value=6e-07 Score=62.99 Aligned_cols=78 Identities=24% Similarity=0.380 Sum_probs=56.1
Q ss_pred EEEEEecCc--ceeEEeeeC--CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCce
Q 026827 86 EYEVEIEQP--YGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (232)
Q Consensus 86 eyeVeL~KP--LGL~Fee~~--dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv 161 (232)
.|.|+|.+| +|+.+..+. +.+++|..|.+++.|+++| |++||+|+++-.. .+-.. .+.++...++...+++
T Consensus 2 ~~~v~l~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~---~v~~~-~~~~~~~~~~~~~~~v 76 (85)
T 1rgw_A 2 AYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGV---NTDTM-THLEAQNKIKSASYNL 76 (85)
T ss_dssp EEEEEECCSSCCCEEECCCGGGTSCCBEEEECTTSHHHHSS-CCCCSBEEEETTE---ECTTC-CHHHHHHHHTTCSSCE
T ss_pred cEEEEEeCCCccCEEEEeccCCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCc-CHHHHHHHHHcCCCeE
Confidence 466777654 677776443 3379999999999999999 9999999998742 22222 2356666777555778
Q ss_pred EEEEeec
Q 026827 162 LMKMQKR 168 (232)
Q Consensus 162 ~LkLeR~ 168 (232)
.|.+.|.
T Consensus 77 ~l~v~R~ 83 (85)
T 1rgw_A 77 SLTLQKS 83 (85)
T ss_dssp EEEEESC
T ss_pred EEEEEeC
Confidence 9999873
No 55
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.41 E-value=2.1e-06 Score=63.36 Aligned_cols=83 Identities=25% Similarity=0.426 Sum_probs=61.7
Q ss_pred hccccEEEEEecC---cceeEEeee--------CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhh
Q 026827 81 EEKYEEYEVEIEQ---PYGLKFAKG--------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR 149 (232)
Q Consensus 81 ~~~~eeyeVeL~K---PLGL~Fee~--------~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~ 149 (232)
..+.+.+.|++.| .+|+.+..+ .+.+++|..|.+++.|+++| |++||+|+++... .+-....+ +
T Consensus 11 ~~~~~~~~~~l~~~~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~---~v~~~~~~-~ 85 (110)
T 1x5q_A 11 RIEEEELTLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGV---ALQGAEHH-E 85 (110)
T ss_dssp CCCCEEEEEEEECSSSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTE---ECTTCCHH-H
T ss_pred cCCcceEEEEEecCCCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCcCHH-H
Confidence 3556789999987 688998754 34699999999999999999 9999999998753 33222222 3
Q ss_pred HHHHhhcccCceEEEEeec
Q 026827 150 TMYTIRQRVGPLLMKMQKR 168 (232)
Q Consensus 150 t~~AIr~RsGpv~LkLeR~ 168 (232)
....++....++.|++.|.
T Consensus 86 ~~~~~~~~g~~v~l~v~R~ 104 (110)
T 1x5q_A 86 AVEALRGAGTAVQMRVWRE 104 (110)
T ss_dssp HHHHHHSCCSEEEEEEEEC
T ss_pred HHHHhhCCCCeEEEEEEEC
Confidence 4445555456889999884
No 56
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.40 E-value=1.1e-06 Score=66.69 Aligned_cols=85 Identities=19% Similarity=0.289 Sum_probs=63.5
Q ss_pred ccccEEEEEecC---cceeEEeeeCC---CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhh
Q 026827 82 EKYEEYEVEIEQ---PYGLKFAKGRD---GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155 (232)
Q Consensus 82 ~~~eeyeVeL~K---PLGL~Fee~~d---GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr 155 (232)
.+.+.++|+|.| +||+.+..+.+ .+++|..|.+++.|+++|.|++||+|+++-.. .+-.. ..-++...++
T Consensus 22 ~~~~~~~v~l~k~~~glG~~l~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~---~v~~~-~~~~~~~~~~ 97 (124)
T 2daz_A 22 LPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQ---ILYGR-SHQNASAIIK 97 (124)
T ss_dssp SSSEEEEEEEECCSSCCCEEEECBSSTTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSC---BCTTS-CHHHHHHHHH
T ss_pred CCCceEEEEEEeCCCccCEEEeccCCCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECCCC-CHHHHHHHHH
Confidence 345667888886 78899987643 59999999999999999999999999998642 33111 2334566776
Q ss_pred cccCceEEEEeecCC
Q 026827 156 QRVGPLLMKMQKRYG 170 (232)
Q Consensus 156 ~RsGpv~LkLeR~~~ 170 (232)
...+++.|.+.|.-.
T Consensus 98 ~~~~~v~l~v~R~~~ 112 (124)
T 2daz_A 98 TAPSKVKLVFIRNED 112 (124)
T ss_dssp HSCSEEEEEEEECTT
T ss_pred cCCCeEEEEEEeCCC
Confidence 655789999998543
No 57
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.40 E-value=1.5e-06 Score=65.36 Aligned_cols=85 Identities=22% Similarity=0.349 Sum_probs=63.6
Q ss_pred ccccEEEEEecC---cceeEEeeeC-------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHH
Q 026827 82 EKYEEYEVEIEQ---PYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTM 151 (232)
Q Consensus 82 ~~~eeyeVeL~K---PLGL~Fee~~-------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~ 151 (232)
.....++|+|.| +||+.+..+. +.++||..|.+++.|+++|.|++||+|+++-.. .+-.. .+-++.
T Consensus 14 ~~~~~~~v~l~r~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~---~v~~~-~~~~~~ 89 (120)
T 2eno_A 14 YLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQ---DLKNL-LHQDAV 89 (120)
T ss_dssp EEEEEEEEEEECCSSSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTE---ECCSC-CHHHHH
T ss_pred CCCceEEEEEEECCCCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCE---ECCCC-CHHHHH
Confidence 344667788876 5889998753 459999999999999999999999999998742 33222 233666
Q ss_pred HHhhcccCceEEEEeecCC
Q 026827 152 YTIRQRVGPLLMKMQKRYG 170 (232)
Q Consensus 152 ~AIr~RsGpv~LkLeR~~~ 170 (232)
..++.....+.|.+.|...
T Consensus 90 ~~~~~~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 90 DLFRNAGYAVSLRVQHRLQ 108 (120)
T ss_dssp HHHHHHCSEEEEEEEEEEE
T ss_pred HHHHcCCCeEEEEEEeCCc
Confidence 6777545678999988654
No 58
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.40 E-value=9.5e-07 Score=64.89 Aligned_cols=84 Identities=18% Similarity=0.388 Sum_probs=63.6
Q ss_pred ccccEEEEEecC---cceeEEeeeC--CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc
Q 026827 82 EKYEEYEVEIEQ---PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (232)
Q Consensus 82 ~~~eeyeVeL~K---PLGL~Fee~~--dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~ 156 (232)
..++.++|+|.| ++|+.+..+. +.++||..|.+++.|+++|.|++||+|+++-.. .+- ...+.++...|+.
T Consensus 6 ~~~~~~~v~l~~~~~g~G~~i~~g~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~---~v~-~~~~~~~~~~l~~ 81 (103)
T 1uep_A 6 SGYKELDVHLRRMESGFGFRILGGDEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGI---PVA-GKTHRYVIDLMHH 81 (103)
T ss_dssp SSEEEECCEEESSSSSCCEEECCCCSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTE---ECT-TSCHHHHHHHHHH
T ss_pred CCceEEEEEEEeCCCccCEEEeeecCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCE---ECC-CCCHHHHHHHHHh
Confidence 445677788876 5788887653 458999999999999999999999999998642 231 1135567777776
Q ss_pred c--cCceEEEEeecC
Q 026827 157 R--VGPLLMKMQKRY 169 (232)
Q Consensus 157 R--sGpv~LkLeR~~ 169 (232)
. -.+|.|++.|..
T Consensus 82 ~~~g~~v~l~v~R~~ 96 (103)
T 1uep_A 82 AARNGQVNLTVRRKV 96 (103)
T ss_dssp HHHHTEEEEEEEEEC
T ss_pred CCCCCcEEEEEEeCC
Confidence 4 478999999864
No 59
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.39 E-value=5.9e-07 Score=65.56 Aligned_cols=81 Identities=22% Similarity=0.355 Sum_probs=60.5
Q ss_pred ccEEEEEecC---cceeEEeeeC----CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc
Q 026827 84 YEEYEVEIEQ---PYGLKFAKGR----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (232)
Q Consensus 84 ~eeyeVeL~K---PLGL~Fee~~----dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~ 156 (232)
.+.++|+|.| .+|+.+..+. +.+++|..|.+++.|+++|.|++||+|+++-.. .+-.. .+.++...++.
T Consensus 10 ~~~~~v~l~~~~~g~G~~l~~~~~~~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~---~v~~~-~~~~~~~~~~~ 85 (104)
T 2djt_A 10 SGHFSVELVRGYAGFGLTLGGGRDVAGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGE---STQGL-THAQAVERIRA 85 (104)
T ss_dssp CCCEEEEEECCSSSCCEEEECCEETTEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTE---ECTTC-CHHHHHHHHHH
T ss_pred CceEEEEEEeCCCCccEEEEeccCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECCCC-CHHHHHHHHHc
Confidence 4568888864 6788887642 468999999999999999999999999998743 23111 24566667766
Q ss_pred ccCceEEEEeec
Q 026827 157 RVGPLLMKMQKR 168 (232)
Q Consensus 157 RsGpv~LkLeR~ 168 (232)
.-.++.|.+.|.
T Consensus 86 ~g~~v~l~v~R~ 97 (104)
T 2djt_A 86 GGPQLHLVIRRP 97 (104)
T ss_dssp TCSEEEEEECCC
T ss_pred CCCeEEEEEEEC
Confidence 446789999874
No 60
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.39 E-value=7.1e-07 Score=66.19 Aligned_cols=83 Identities=19% Similarity=0.376 Sum_probs=62.6
Q ss_pred ccEEEEEecC---cceeEEee---e-----CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHH
Q 026827 84 YEEYEVEIEQ---PYGLKFAK---G-----RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMY 152 (232)
Q Consensus 84 ~eeyeVeL~K---PLGL~Fee---~-----~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~ 152 (232)
.+.++|+|.| +||+.+.. + .+.++||..|.|++.|+++|.|++||+|+++... .+-.. ..-++..
T Consensus 3 ~~~~~v~l~k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~---~v~~~-~~~~~~~ 78 (113)
T 2g5m_B 3 MELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGT---SLVGV-TQSFAAS 78 (113)
T ss_dssp CEEEEEECCCCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTE---ECSSC-CHHHHHH
T ss_pred eEEEEEEEEeCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECCCC-CHHHHHH
Confidence 4567888864 58899887 2 2459999999999999999999999999998742 33222 2445666
Q ss_pred HhhcccCceEEEEeecCC
Q 026827 153 TIRQRVGPLLMKMQKRYG 170 (232)
Q Consensus 153 AIr~RsGpv~LkLeR~~~ 170 (232)
+++....++.|.+.|.-.
T Consensus 79 ~~~~~g~~v~l~v~R~~~ 96 (113)
T 2g5m_B 79 VLRNTKGRVRFMIGRERP 96 (113)
T ss_dssp HHHHSCSSCEEEEEECCC
T ss_pred HHhcCCCeEEEEEEeCCC
Confidence 777656789999998644
No 61
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.39 E-value=1.3e-06 Score=63.70 Aligned_cols=77 Identities=21% Similarity=0.423 Sum_probs=59.2
Q ss_pred EEEEecC----cceeEEeeeCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCc
Q 026827 87 YEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP 160 (232)
Q Consensus 87 yeVeL~K----PLGL~Fee~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGp 160 (232)
.+|+|.| +||+.+....+ .+++|..|.+++.|+++| |++||+|+++... .+-... +-+++..++. ..+
T Consensus 12 ~~v~l~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~---~v~~~~-~~~~~~~~~~-~~~ 85 (100)
T 2eeh_A 12 HSVRVEKSPAGRLGFSVRGGSEHGLGIFVSKVEEGSSAERAG-LCVGDKITEVNGL---SLESTT-MGSAVKVLTS-SSR 85 (100)
T ss_dssp CCEEECCCSSSSCSEEEECCTTTTCCEEEEEECTTSHHHHHT-CCSSCEEEEETTE---ECSSCC-HHHHHHHHHS-CSS
T ss_pred EEEEEEECCCCCccEEEEccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCCC-HHHHHHhhcC-CCE
Confidence 4456643 39999987643 489999999999999999 9999999998743 333332 5667777777 688
Q ss_pred eEEEEeecC
Q 026827 161 LLMKMQKRY 169 (232)
Q Consensus 161 v~LkLeR~~ 169 (232)
+.|.+.|.-
T Consensus 86 v~l~v~R~g 94 (100)
T 2eeh_A 86 LHMMVRRMG 94 (100)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEECC
Confidence 999999853
No 62
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.39 E-value=2.6e-06 Score=61.21 Aligned_cols=79 Identities=22% Similarity=0.415 Sum_probs=57.5
Q ss_pred cEEEEEecC--cceeEEeeeC----------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHH
Q 026827 85 EEYEVEIEQ--PYGLKFAKGR----------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMY 152 (232)
Q Consensus 85 eeyeVeL~K--PLGL~Fee~~----------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~ 152 (232)
.+++|++.| +||+.+..+. +.+++|..|.+++.|++ | |++||+|+++-.. .+=.. ..-++..
T Consensus 3 ~~~~v~l~~~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~---~v~~~-~~~~~~~ 76 (95)
T 1mfg_A 3 MEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGY---SFINI-EHGQAVS 76 (95)
T ss_dssp EEEEEEEECSSSCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTE---ECTTC-BHHHHHH
T ss_pred eEEEEEECCCCCCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCE---EcCCC-CHHHHHH
Confidence 457777776 5888888643 34899999999999999 7 9999999998742 22111 2334556
Q ss_pred HhhcccCceEEEEeecC
Q 026827 153 TIRQRVGPLLMKMQKRY 169 (232)
Q Consensus 153 AIr~RsGpv~LkLeR~~ 169 (232)
+++....++.|.+.|..
T Consensus 77 ~~~~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 77 LLKTFQNTVELIIVREV 93 (95)
T ss_dssp HHHHCCSEEEEEEEEEC
T ss_pred HhhcCCCeEEEEEEeCC
Confidence 66654577899998864
No 63
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.39 E-value=9.6e-07 Score=62.50 Aligned_cols=78 Identities=24% Similarity=0.459 Sum_probs=56.5
Q ss_pred EEEEEe--cCcceeEEeeeCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCce
Q 026827 86 EYEVEI--EQPYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (232)
Q Consensus 86 eyeVeL--~KPLGL~Fee~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv 161 (232)
.+.|+| +.|+|+.+..+.+ .+++|..|.+++.|+++| |++||+|+++-.. .+-.. .+.++...++....++
T Consensus 4 ~~~v~l~~~~~~G~~l~~g~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~---~v~~~-~~~~~~~~~~~~g~~v 78 (88)
T 2uzc_A 4 NYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGI---NAQGM-THLEAQNKIKGCTGSL 78 (88)
T ss_dssp EEEEEEESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTE---ECTTC-CHHHHHHHHHTCCSEE
T ss_pred EEEEEEcCCCcccEEEECcCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHhCCCeE
Confidence 344444 4567888876543 389999999999999999 9999999998742 22222 1356667777555678
Q ss_pred EEEEeec
Q 026827 162 LMKMQKR 168 (232)
Q Consensus 162 ~LkLeR~ 168 (232)
.|.+.|.
T Consensus 79 ~l~v~R~ 85 (88)
T 2uzc_A 79 NMTLQRE 85 (88)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 9999874
No 64
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.38 E-value=7.9e-07 Score=67.66 Aligned_cols=80 Identities=15% Similarity=0.320 Sum_probs=61.8
Q ss_pred cEEEEEecC---cceeEEeeeC-----CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc
Q 026827 85 EEYEVEIEQ---PYGLKFAKGR-----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~-----dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~ 156 (232)
+..+|+|.| ++|+.+..+. +.+++|..|.++|.|+++|.|++||+|+++... .+-. ..+.++...|+.
T Consensus 25 ~~~~v~L~k~~~glGf~l~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~---~v~~-~~~~~~~~~l~~ 100 (117)
T 2fne_A 25 QCKSITLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQ---SLEG-VTHEEAVAILKR 100 (117)
T ss_dssp EEEEEEECCBTTBTSEEEEEEEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ECTT-CCHHHHHHHHHH
T ss_pred ccEEEEEEeCCCcccEEEecccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHc
Confidence 446777765 6889988653 348999999999999999999999999998742 2221 155677788886
Q ss_pred ccCceEEEEeec
Q 026827 157 RVGPLLMKMQKR 168 (232)
Q Consensus 157 RsGpv~LkLeR~ 168 (232)
..+++.|.+.|.
T Consensus 101 ~~~~v~l~v~R~ 112 (117)
T 2fne_A 101 TKGTVTLMVLSS 112 (117)
T ss_dssp CCSSEEEEEEEC
T ss_pred CCCeEEEEEEeC
Confidence 667899999884
No 65
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.38 E-value=1e-06 Score=63.47 Aligned_cols=78 Identities=19% Similarity=0.385 Sum_probs=59.0
Q ss_pred EEEEecC----cceeEEeeeCC--------CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHh
Q 026827 87 YEVEIEQ----PYGLKFAKGRD--------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (232)
Q Consensus 87 yeVeL~K----PLGL~Fee~~d--------GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AI 154 (232)
..|+|.| ++|+.+..+.+ .+++|..|.+++.|+++|.|++||+|+++... .+-.. ...++..++
T Consensus 7 ~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~---~v~~~-~~~~~~~~l 82 (98)
T 1ihj_A 7 HMVTLDKTGKKSFGICIVRGEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGK---DVRNS-TEQAVIDLI 82 (98)
T ss_dssp EEEEEECTTSSSCCEEEEEEEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTE---ECTTC-CHHHHHHHH
T ss_pred EEEEEEeCCCCCcCEEEeccccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECCCC-CHHHHHHHH
Confidence 5688888 89999976532 28999999999999999999999999998743 22221 124566677
Q ss_pred hcccCceEEEEeec
Q 026827 155 RQRVGPLLMKMQKR 168 (232)
Q Consensus 155 r~RsGpv~LkLeR~ 168 (232)
+....++.|.+.|.
T Consensus 83 ~~~g~~v~l~v~R~ 96 (98)
T 1ihj_A 83 KEADFKIELEIQTF 96 (98)
T ss_dssp HHSCSEEEEEEEEC
T ss_pred hcCCCeEEEEEEeC
Confidence 76556889999883
No 66
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.37 E-value=4.9e-07 Score=66.29 Aligned_cols=85 Identities=20% Similarity=0.306 Sum_probs=62.6
Q ss_pred hhccccEEEEEecCc---ceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc
Q 026827 80 QEEKYEEYEVEIEQP---YGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ 156 (232)
Q Consensus 80 ~~~~~eeyeVeL~KP---LGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~ 156 (232)
....++++.|+|.|. +|+.+.. +.+++|..|.+++.|+++| |++||+|+++-.. .+- ...+.++...|+.
T Consensus 10 ~~~~~~~~~v~l~~~~~g~G~~~~~--~~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~---~v~-~~~~~~~~~~l~~ 82 (100)
T 1whd_A 10 DPENGEKLQITIRRGKDGFGFTICC--DSPVRVQAVDSGGPAERAG-LQQLDTVLQLNER---PVE-HWKCVELAHEIRS 82 (100)
T ss_dssp SCCCCEEEEEEEECCSSSSSCBCCC--SSSCBCCBCCTTSHHHHHT-CCSSCEEEEETTE---ECT-TCCHHHHHHHHHH
T ss_pred CccccceEEEEEECCCCeeeEEEeC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECC-CCCHHHHHHHHHc
Confidence 345677888999775 6666544 4689999999999999999 9999999998753 111 1134566677776
Q ss_pred ccCceEEEEeecCCc
Q 026827 157 RVGPLLMKMQKRYGK 171 (232)
Q Consensus 157 RsGpv~LkLeR~~~~ 171 (232)
..+.+.|.+.|..++
T Consensus 83 ~~~~v~l~v~R~~~~ 97 (100)
T 1whd_A 83 CPSEIILLVWRVSGP 97 (100)
T ss_dssp CSSEEEEEEEECCSS
T ss_pred CCCeEEEEEEECCCC
Confidence 566799999886554
No 67
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.36 E-value=2.3e-06 Score=60.21 Aligned_cols=77 Identities=10% Similarity=0.238 Sum_probs=54.9
Q ss_pred EEEEecC---cceeEEeeeCCC--CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc--cC
Q 026827 87 YEVEIEQ---PYGLKFAKGRDG--GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR--VG 159 (232)
Q Consensus 87 yeVeL~K---PLGL~Fee~~dG--gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R--sG 159 (232)
++|+|.| .+|+.+..+.++ +++|..|.+++.|+++|.+++||+|+++-.. .+- .....++..+|+.. ..
T Consensus 2 ~~v~l~k~~~g~G~~i~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~---~v~-~~~~~~~~~~l~~~~~g~ 77 (85)
T 2i04_A 2 IHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDT---CVL-GHTHAQVVKIFQSIPIGA 77 (85)
T ss_dssp EEEEEECBTTBSSEEEEECCSTTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ECT-TCCHHHHHHHHHTSCTTC
T ss_pred EEEEEEECCCCCCEEEEcccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE---ECC-CCCHHHHHHHHHhCCCCC
Confidence 5566654 578888765443 7999999999999999999999999998642 221 01234566677753 35
Q ss_pred ceEEEEee
Q 026827 160 PLLMKMQK 167 (232)
Q Consensus 160 pv~LkLeR 167 (232)
++.|.+.|
T Consensus 78 ~v~l~v~R 85 (85)
T 2i04_A 78 SVDLELCR 85 (85)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 67888765
No 68
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.35 E-value=1.2e-06 Score=62.52 Aligned_cols=72 Identities=18% Similarity=0.360 Sum_probs=55.2
Q ss_pred EecCcceeEEeeeCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchh--hHHHHhhcccCceEEEE
Q 026827 90 EIEQPYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYG--RTMYTIRQRVGPLLMKM 165 (232)
Q Consensus 90 eL~KPLGL~Fee~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G--~t~~AIr~RsGpv~LkL 165 (232)
.=..|+|+.+..+.+ .+++|..|.+++.|+++| |++||+|+++... .+ .++. ++..+++....++.|.+
T Consensus 10 ~~~~~~G~~l~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~---~v---~~~~~~~~~~~l~~~g~~v~l~v 82 (91)
T 2pkt_A 10 QGPGPWGFRLVGGKDFEQPLAISRVTPGSKAALAN-LCIGDVITAIDGE---NT---SNMTHLEAQNRIKGCTDNLTLTV 82 (91)
T ss_dssp ESSSCCSEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTE---EC---TTCCHHHHHHHHHTCSSEEEEEE
T ss_pred CCCCCCCEEEEccCCCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCE---EC---CCCCHHHHHHHHHcCCCeEEEEE
Confidence 334578898887644 489999999999999999 9999999998753 22 3333 56677776556789999
Q ss_pred eec
Q 026827 166 QKR 168 (232)
Q Consensus 166 eR~ 168 (232)
.|.
T Consensus 83 ~R~ 85 (91)
T 2pkt_A 83 ARS 85 (91)
T ss_dssp EEE
T ss_pred EEC
Confidence 884
No 69
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.35 E-value=1.8e-06 Score=67.73 Aligned_cols=84 Identities=20% Similarity=0.366 Sum_probs=62.1
Q ss_pred hccccEEEEEecC-------cceeEEeeeC--------------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCC
Q 026827 81 EEKYEEYEVEIEQ-------PYGLKFAKGR--------------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGT 139 (232)
Q Consensus 81 ~~~~eeyeVeL~K-------PLGL~Fee~~--------------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGd 139 (232)
.+....+.|+|.| .||+.+..+. +.+++|..|.+++.|+++| |++||+|+++...
T Consensus 19 ~~~~~~~~v~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~--- 94 (139)
T 2vz5_A 19 YFQSMVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGW--- 94 (139)
T ss_dssp ---CEEEEEEEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTE---
T ss_pred cCCCceEEEEEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCE---
Confidence 3445667888888 7999986532 3599999999999999999 9999999998742
Q ss_pred ceeeccchhhHHHHhhccc-CceEEEEeecC
Q 026827 140 EIWPAAEYGRTMYTIRQRV-GPLLMKMQKRY 169 (232)
Q Consensus 140 ElWpA~~~G~t~~AIr~Rs-Gpv~LkLeR~~ 169 (232)
.+- ...+.++..+|+... .++.|.+.|.-
T Consensus 95 ~v~-~~~~~~~~~~l~~~~g~~v~l~v~R~g 124 (139)
T 2vz5_A 95 DMT-MVTHDQARKRLTKRSEEVVRLLVTRQS 124 (139)
T ss_dssp ECT-TCCHHHHHHHHCCTTCSEEEEEEEECC
T ss_pred EcC-CCCHHHHHHHHHhCCCCEEEEEEEECC
Confidence 111 114567778888755 46899998853
No 70
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.35 E-value=1.8e-06 Score=63.40 Aligned_cols=85 Identities=19% Similarity=0.330 Sum_probs=60.5
Q ss_pred ccccEEEEEec--CcceeEEeee-----CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHh
Q 026827 82 EKYEEYEVEIE--QPYGLKFAKG-----RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (232)
Q Consensus 82 ~~~eeyeVeL~--KPLGL~Fee~-----~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AI 154 (232)
.+.+.++|+|+ .++|+.+..+ .+.++||..|.+++.|+++|.|++||+|+++... .+-. ...-++...+
T Consensus 8 ~~~~~~~v~l~~~~glG~~i~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~---~v~~-~~~~~~~~~~ 83 (106)
T 3axa_A 8 KEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGR---SLVG-LSQERAAELM 83 (106)
T ss_dssp --CCEEEEEEECSSSCSEEEEEEECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTE---ECTT-CCHHHHHHHH
T ss_pred CCceEEEEEECCCCccCEEEEeecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECCC-CCHHHHHHHH
Confidence 44566777773 3577788643 3448999999999999999999999999998743 2221 1344566677
Q ss_pred hcccCceEEEEeecCC
Q 026827 155 RQRVGPLLMKMQKRYG 170 (232)
Q Consensus 155 r~RsGpv~LkLeR~~~ 170 (232)
+....++.|.+.|.-.
T Consensus 84 ~~~g~~v~l~v~R~~~ 99 (106)
T 3axa_A 84 TRTSSVVTLEVAKQGA 99 (106)
T ss_dssp HTCCSEEEEEEECCCS
T ss_pred HcCCCeEEEEEEeCCc
Confidence 7655678999988543
No 71
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.34 E-value=1.5e-06 Score=71.09 Aligned_cols=82 Identities=21% Similarity=0.428 Sum_probs=63.8
Q ss_pred ccccEEEEEecC---cceeEEee---e-----CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhH
Q 026827 82 EKYEEYEVEIEQ---PYGLKFAK---G-----RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRT 150 (232)
Q Consensus 82 ~~~eeyeVeL~K---PLGL~Fee---~-----~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t 150 (232)
...+.++|+|.| +||+.+.. + .+.++||..|.+||-|+++|.|++||+|++|... .|- -....++
T Consensus 77 ~~~~~~~v~l~k~~~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~---~v~-~~~~~~~ 152 (170)
T 3egg_C 77 ERLELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGT---SLV-GVTQSFA 152 (170)
T ss_dssp TTSEEEEEEEECBTTBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ECT-TBCHHHH
T ss_pred CCceEEEEEEEeCCCeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCE---ECC-CCCHHHH
Confidence 456778899875 89999987 2 2358999999999999999999999999998743 221 1234567
Q ss_pred HHHhhcccCceEEEEee
Q 026827 151 MYTIRQRVGPLLMKMQK 167 (232)
Q Consensus 151 ~~AIr~RsGpv~LkLeR 167 (232)
...|+...+.|.|++.|
T Consensus 153 ~~~l~~~g~~v~L~V~R 169 (170)
T 3egg_C 153 ASVLRNTKGRVRFMIGR 169 (170)
T ss_dssp HHHHHHCCSEEEEEEEE
T ss_pred HHHHHcCCCEEEEEEEe
Confidence 77888766789999987
No 72
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.34 E-value=1.4e-06 Score=66.20 Aligned_cols=83 Identities=20% Similarity=0.325 Sum_probs=61.9
Q ss_pred cccEEEEEecC-----cceeEEeeeCC----CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHH
Q 026827 83 KYEEYEVEIEQ-----PYGLKFAKGRD----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYT 153 (232)
Q Consensus 83 ~~eeyeVeL~K-----PLGL~Fee~~d----GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~A 153 (232)
+.+..+|++.| .||+.+....+ .+++|..|.+++.|+++|.|++||+|+++... . +..+.++..+
T Consensus 17 ~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~---~---v~~~~~~~~~ 90 (124)
T 1wh1_A 17 ELELEEVDLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGI---E---VQNREEAVAL 90 (124)
T ss_dssp SCEECCBCCCCSSTTCCCCEEEECCCCCSSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSC---B---CCSHHHHHHH
T ss_pred cceEEEEEEEecCCCCcccEEEEecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---E---CCCHHHHHHH
Confidence 33444455533 58999987653 79999999999999999989999999998742 3 3345677778
Q ss_pred hhccc-CceEEEEeecCCc
Q 026827 154 IRQRV-GPLLMKMQKRYGK 171 (232)
Q Consensus 154 Ir~Rs-Gpv~LkLeR~~~~ 171 (232)
|+... .++.|.+.|.-..
T Consensus 91 l~~~~g~~v~l~v~R~g~~ 109 (124)
T 1wh1_A 91 LTSEENKNFSLLIARPELQ 109 (124)
T ss_dssp HTCSSCCSCCEEEEECSSC
T ss_pred HHhCCCCEEEEEEEECCEE
Confidence 87654 5789999885443
No 73
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.33 E-value=1.9e-06 Score=62.94 Aligned_cols=83 Identities=22% Similarity=0.403 Sum_probs=60.3
Q ss_pred hccccEEEEEecC--cceeEEeeeC----------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchh
Q 026827 81 EEKYEEYEVEIEQ--PYGLKFAKGR----------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYG 148 (232)
Q Consensus 81 ~~~~eeyeVeL~K--PLGL~Fee~~----------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G 148 (232)
+...+.+.|++.| +||+.+..+. +.+++|..|.+++.|++ | |++||+|+++... .+=. ...-
T Consensus 7 ~~~~~~~~v~l~~~~~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~---~v~~-~~~~ 80 (103)
T 1n7t_A 7 ELAKQEIRVRVEKDPELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGY---SFIN-IEHG 80 (103)
T ss_dssp SSSCCCEEEEEECSSCCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTE---ECSS-CCHH
T ss_pred CcccEEEEEEEccCCCccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCE---ECCC-CCHH
Confidence 3556667777766 5788887643 35999999999999999 7 9999999998742 2211 1234
Q ss_pred hHHHHhhcccCceEEEEeecC
Q 026827 149 RTMYTIRQRVGPLLMKMQKRY 169 (232)
Q Consensus 149 ~t~~AIr~RsGpv~LkLeR~~ 169 (232)
++..+++....++.|.+.|..
T Consensus 81 ~~~~~~~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 81 QAVSLLKTFQNTVELIIVREV 101 (103)
T ss_dssp HHHHHHHHCCSEEEEEEECCC
T ss_pred HHHHHhhcCCCeEEEEEEecC
Confidence 566667654577899998854
No 74
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.32 E-value=8.9e-07 Score=65.11 Aligned_cols=84 Identities=21% Similarity=0.402 Sum_probs=63.7
Q ss_pred ccccEEEEEecC---cceeEEeeeCC-CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc
Q 026827 82 EKYEEYEVEIEQ---PYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (232)
Q Consensus 82 ~~~eeyeVeL~K---PLGL~Fee~~d-GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R 157 (232)
...+.+.|+|.| ++|+.+....+ .+++|..|.+++.|+++|.|++||+|+++-.. .+-.. ....+...++..
T Consensus 12 ~~~~~~~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~---~v~~~-~~~~~~~~~~~~ 87 (113)
T 1um7_A 12 DAREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGV---NLRNA-THEQAAAALKRA 87 (113)
T ss_dssp CCCSEEEEEEECCSSCSSBCCBCCSTTCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSC---BCTTC-CHHHHHHHHHSC
T ss_pred CCCceEEEEEEECCCcccEEEEeccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECCCC-CHHHHHHHHHhC
Confidence 455778899987 68888877654 59999999999999999989999999998753 33222 234556667655
Q ss_pred cCceEEEEeecC
Q 026827 158 VGPLLMKMQKRY 169 (232)
Q Consensus 158 sGpv~LkLeR~~ 169 (232)
..++.|.+.|..
T Consensus 88 ~~~v~l~v~r~~ 99 (113)
T 1um7_A 88 GQSVTIVAQYRP 99 (113)
T ss_dssp CSEEEEEEECCH
T ss_pred CCcEEEEEEECc
Confidence 567899998843
No 75
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.31 E-value=1.3e-06 Score=66.95 Aligned_cols=80 Identities=21% Similarity=0.414 Sum_probs=59.9
Q ss_pred cEEEEEecCc-----ceeEEeeeC-----------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchh
Q 026827 85 EEYEVEIEQP-----YGLKFAKGR-----------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYG 148 (232)
Q Consensus 85 eeyeVeL~KP-----LGL~Fee~~-----------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G 148 (232)
+...|+|.|. ||+.+.... +.++||..|.++|.|+++|.|++||+|+++... .+ ....+.
T Consensus 29 ~~r~v~l~k~~~~~~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~---~v-~~~~~~ 104 (128)
T 1nf3_C 29 THRRVRLCKYGTEKPLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGI---EV-SGKSLD 104 (128)
T ss_dssp TCEEEEECCSSTTSCCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTE---ES-TTCCHH
T ss_pred ccEEEEEEECCCCCCccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCE---EC-CCCCHH
Confidence 3456777664 899887542 248999999999999999999999999998742 23 113455
Q ss_pred hHHHHhhcccCceEEEEeec
Q 026827 149 RTMYTIRQRVGPLLMKMQKR 168 (232)
Q Consensus 149 ~t~~AIr~RsGpv~LkLeR~ 168 (232)
++..+|+...+.+.|.+.|.
T Consensus 105 ~~~~~l~~~~~~v~l~v~r~ 124 (128)
T 1nf3_C 105 QVTDMMIANSRNLIITVRPA 124 (128)
T ss_dssp HHHHHHHHTTTSEEEEEECC
T ss_pred HHHHHHHcCCCeEEEEEEEC
Confidence 67777876567799998873
No 76
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.31 E-value=4.5e-06 Score=60.23 Aligned_cols=78 Identities=17% Similarity=0.322 Sum_probs=57.3
Q ss_pred cEEEEEecC---cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCce
Q 026827 85 EEYEVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv 161 (232)
....|+|.| ++|+.+.. +.+++|..|.+++.|+++| |++||+|+++... .+-....+ +++..++. ..++
T Consensus 8 ~~r~v~l~~~~~~~G~~l~~--~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~---~v~~~~~~-~~~~~~~~-g~~v 79 (93)
T 2dls_A 8 VQRCVIIQKDQHGFGFTVSG--DRIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGT---MVTNSSHL-EVVKLIKS-GAYV 79 (93)
T ss_dssp CEEEEEEECSSSSCCEEEEC--SSSCEEEEECSSSTTTTTT-CCSSCEEEEETTE---ECSSSCHH-HHHHHHTS-SSEE
T ss_pred CCEEEEEEeCCCceeEEEeC--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCCCHH-HHHHhhcC-CCEE
Confidence 345666655 46777753 5689999999999999999 9999999998753 33333233 56667764 6789
Q ss_pred EEEEeecCC
Q 026827 162 LMKMQKRYG 170 (232)
Q Consensus 162 ~LkLeR~~~ 170 (232)
.|.+.|...
T Consensus 80 ~l~v~R~~~ 88 (93)
T 2dls_A 80 ALTLLGSSS 88 (93)
T ss_dssp EEEEECCCC
T ss_pred EEEEEECCC
Confidence 999998654
No 77
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.31 E-value=2.9e-06 Score=64.53 Aligned_cols=83 Identities=14% Similarity=0.340 Sum_probs=61.3
Q ss_pred ccccEEEEEecC---cceeEEeeeCC-----CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHH
Q 026827 82 EKYEEYEVEIEQ---PYGLKFAKGRD-----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYT 153 (232)
Q Consensus 82 ~~~eeyeVeL~K---PLGL~Fee~~d-----GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~A 153 (232)
...+.+.|++.| ++|+.+....+ .+++|..|.+++.|+++|.|++||+|+++... .+-. ..+.++...
T Consensus 27 ~~~~~~~v~l~~~~~~lG~~l~~~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~---~v~~-~~~~~~~~~ 102 (121)
T 2kom_A 27 KIGKRLNIQLKKGTEGLGFSITSRDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGV---DLVG-KSQEEVVSL 102 (121)
T ss_dssp CSCEEEEEEEECCTTCCCEEEECCCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTE---ECTT-SCHHHHHHH
T ss_pred cCCeEEEEEEEcCCCcEeEEEEeccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE---EcCC-CCHHHHHHH
Confidence 345678888876 47888886543 58999999999999999999999999998743 2211 124566677
Q ss_pred hhcc--cCceEEEEeec
Q 026827 154 IRQR--VGPLLMKMQKR 168 (232)
Q Consensus 154 Ir~R--sGpv~LkLeR~ 168 (232)
|+.. ..++.|++.|.
T Consensus 103 l~~~~~g~~v~l~v~R~ 119 (121)
T 2kom_A 103 LRSTKMEGTVSLLVFRQ 119 (121)
T ss_dssp HHHCCSSCEEEEEEEEC
T ss_pred HhcCCCCCEEEEEEEeC
Confidence 7753 35789998873
No 78
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.30 E-value=8e-07 Score=65.12 Aligned_cols=81 Identities=22% Similarity=0.365 Sum_probs=59.6
Q ss_pred cEEEEEec--CcceeEEeeeCCC--CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCc
Q 026827 85 EEYEVEIE--QPYGLKFAKGRDG--GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP 160 (232)
Q Consensus 85 eeyeVeL~--KPLGL~Fee~~dG--gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGp 160 (232)
++++|+|. .++|+.+..+.+. +++|..|.+++.|+++| |++||+|+++... .+... .+-++...++....+
T Consensus 5 ~~~~v~l~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~---~v~~~-~~~~~~~~~~~~g~~ 79 (103)
T 1wf7_A 5 SSGSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAH-VRIGDVVLSIDGI---SAQGM-THLEAQNKIKACTGS 79 (103)
T ss_dssp CCEEEEEESSSCCSCCEEEETTTTEEEEECCCCTTCHHHHTT-CCTTCBEEEETTE---ECSSC-CHHHHHHHHHHCSSE
T ss_pred CEEEEEEeCCCccCEEEeccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHcCCCe
Confidence 45777776 7788888876543 69999999999999999 9999999998743 33322 233455666654567
Q ss_pred eEEEEeecCC
Q 026827 161 LLMKMQKRYG 170 (232)
Q Consensus 161 v~LkLeR~~~ 170 (232)
+.|.+.|.-.
T Consensus 80 v~l~v~R~g~ 89 (103)
T 1wf7_A 80 LNMTLQRASA 89 (103)
T ss_dssp EEEEECCCSC
T ss_pred EEEEEEeCCC
Confidence 8999988543
No 79
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.30 E-value=3.1e-06 Score=65.00 Aligned_cols=77 Identities=19% Similarity=0.377 Sum_probs=58.4
Q ss_pred EEEEecC----cceeEEeee-----------CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccc--hhh
Q 026827 87 YEVEIEQ----PYGLKFAKG-----------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGR 149 (232)
Q Consensus 87 yeVeL~K----PLGL~Fee~-----------~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~--~G~ 149 (232)
++|++.| .+|+.+... .+.+++|..|.+++.|+++|.|++||+|+++... +..+ +.+
T Consensus 26 ~~v~l~k~~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~------~v~~~~~~~ 99 (123)
T 2iwq_A 26 RRVELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGM------DLRDASHEQ 99 (123)
T ss_dssp EEEEECCCTTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTE------ECTTCCHHH
T ss_pred EEEEEEecCCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE------ECCCCCHHH
Confidence 4555543 478877542 2358999999999999999999999999998753 3333 667
Q ss_pred HHHHhhcccCceEEEEeecC
Q 026827 150 TMYTIRQRVGPLLMKMQKRY 169 (232)
Q Consensus 150 t~~AIr~RsGpv~LkLeR~~ 169 (232)
+..+|+...+++.|.+.|..
T Consensus 100 ~~~~l~~~~~~v~l~v~r~~ 119 (123)
T 2iwq_A 100 AVEAIRKAGNPVVFMVQSII 119 (123)
T ss_dssp HHHHHHHCCSSEEEEEECCC
T ss_pred HHHHHHcCCCeEEEEEEECC
Confidence 77888876779999998854
No 80
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.29 E-value=3e-06 Score=60.22 Aligned_cols=73 Identities=19% Similarity=0.391 Sum_probs=55.4
Q ss_pred CcceeEEeeeCC-CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeecCC
Q 026827 93 QPYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRYG 170 (232)
Q Consensus 93 KPLGL~Fee~~d-GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~~~ 170 (232)
.++|+.+..+.+ .+++|..|.+++.|+++| |++||+|+++... .+-.. .+.++...|+...+.+.+.+-|+.+
T Consensus 14 ~g~G~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~---~v~~~-~~~~~~~~l~~~~~~~~~~~~~r~~ 87 (91)
T 1g9o_A 14 NGYGFHLHGEKGKLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGE---NVEKE-THQQVVSRIRAALNAVRLLVVDPET 87 (91)
T ss_dssp TBCCEEEEECTTCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTE---ECTTC-CHHHHHHHHHTCSSEEEEEEECCCC
T ss_pred CcccEEEEecCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHcCCCcEEEEEEcCCc
Confidence 468899887654 599999999999999999 9999999998753 22111 2456777888767877777666544
No 81
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.29 E-value=4e-06 Score=65.13 Aligned_cols=81 Identities=17% Similarity=0.312 Sum_probs=59.8
Q ss_pred EEEEecC----cceeEEeeeCCC--------------CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchh
Q 026827 87 YEVEIEQ----PYGLKFAKGRDG--------------GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYG 148 (232)
Q Consensus 87 yeVeL~K----PLGL~Fee~~dG--------------gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G 148 (232)
..|+|.| ++|+.+..+.+. ++||..|.+++.|+++| |++||+|+++... .+-. ....
T Consensus 29 r~v~l~r~~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~---~v~~-~~~~ 103 (132)
T 3l4f_D 29 KTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQ---NVVK-VGHR 103 (132)
T ss_dssp CEEEEECCTTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSS---BCTT-SCHH
T ss_pred EEEEEEECCCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCC-CCHH
Confidence 4666665 689988887552 69999999999999999 9999999998742 2211 1345
Q ss_pred hHHHHhhcccCceEEEEeecCCcc
Q 026827 149 RTMYTIRQRVGPLLMKMQKRYGKM 172 (232)
Q Consensus 149 ~t~~AIr~RsGpv~LkLeR~~~~~ 172 (232)
++...|+.....+.|++.|...+.
T Consensus 104 ~~~~~l~~~g~~v~l~v~~~~~~~ 127 (132)
T 3l4f_D 104 QVVNMIRQGGNTLMVKVVMVTRHP 127 (132)
T ss_dssp HHHHHHHHTTTEEEEEEECCCC--
T ss_pred HHHHHHHcCCCEEEEEEEECCCCC
Confidence 677788875678899888865443
No 82
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.29 E-value=4.3e-06 Score=63.32 Aligned_cols=85 Identities=15% Similarity=0.179 Sum_probs=64.9
Q ss_pred ccccEEEEEecC----cceeEEeeeCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhh
Q 026827 82 EKYEEYEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155 (232)
Q Consensus 82 ~~~eeyeVeL~K----PLGL~Fee~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr 155 (232)
+.....+|+|.| .+|+.+..+.+ .++||..|.+++.|+++|.+++||+|+++... .+ ....+.++...|+
T Consensus 16 ~~~~~~~v~l~k~~~~~lG~~i~gg~~~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~---~v-~~~~~~~~~~~l~ 91 (125)
T 3hpk_A 16 IPTVPGKVTLQKDAQNLIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGR---SI-KGKTKVEVAKMIQ 91 (125)
T ss_dssp CCEEEEEEEEECCTTSCCCEEEEECSSCCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTE---EC-TTCCHHHHHHHHH
T ss_pred CcCCCeEEEEEeCCCCCcCEEEeccCCCCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHH
Confidence 334556777877 58999887654 48999999999999999999999999998743 22 1124556778888
Q ss_pred cccCceEEEEeecCC
Q 026827 156 QRVGPLLMKMQKRYG 170 (232)
Q Consensus 156 ~RsGpv~LkLeR~~~ 170 (232)
...+.+.|.+.|..+
T Consensus 92 ~~~~~v~l~v~r~~~ 106 (125)
T 3hpk_A 92 EVKGEVTIHYNKLQA 106 (125)
T ss_dssp HSCSEEEEEEEEECS
T ss_pred cCCCeEEEEEEECCC
Confidence 767789999998554
No 83
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.29 E-value=1.9e-06 Score=64.39 Aligned_cols=80 Identities=23% Similarity=0.468 Sum_probs=57.1
Q ss_pred EEEecC---cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEE
Q 026827 88 EVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMK 164 (232)
Q Consensus 88 eVeL~K---PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~Lk 164 (232)
.|+|.| ++|+.+....+++++|..|.+++.|+++| |++||+|+++... .+-....+ .....++....++.|.
T Consensus 22 ~v~l~~~~~~lG~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~---~v~~~~~~-~~~~~~~~~g~~v~l~ 96 (117)
T 1uit_A 22 HVKVQKGSEPLGISIVSGEKGGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGI---NLRSATEQ-QARLIIGQQCDTITIL 96 (117)
T ss_dssp EEEEECSSCCCCEEEEECTTSCEEEEEECTTSHHHHHT-CCTTCEECEETTE---ETTTCCHH-HHHHHTTSCCSEEEEE
T ss_pred EEEEEeCCCCccEEEEccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCCCHH-HHHHHHHcCCCeEEEE
Confidence 466655 79999988778899999999999999999 9999999998743 22222222 2222334435678999
Q ss_pred EeecCCcc
Q 026827 165 MQKRYGKM 172 (232)
Q Consensus 165 LeR~~~~~ 172 (232)
+.|....+
T Consensus 97 v~r~~~~~ 104 (117)
T 1uit_A 97 AQYNPHVH 104 (117)
T ss_dssp ECCCSCCC
T ss_pred EEECCchh
Confidence 98865433
No 84
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.28 E-value=4e-06 Score=63.56 Aligned_cols=87 Identities=16% Similarity=0.319 Sum_probs=64.9
Q ss_pred hccccEEEEEecC----cceeEEeee------CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhH
Q 026827 81 EEKYEEYEVEIEQ----PYGLKFAKG------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRT 150 (232)
Q Consensus 81 ~~~~eeyeVeL~K----PLGL~Fee~------~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t 150 (232)
-...+.++|+|.| .+|+.+..+ .+..++|..|.+++.|+++|.|++||+|+++-.. .+-. ..+.++
T Consensus 11 ~~~~~~~~v~l~k~~~~glG~~l~~~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~---~v~~-~~~~~~ 86 (122)
T 1v5q_A 11 VVHTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGI---PTED-STFEEA 86 (122)
T ss_dssp CCCEEEEEEEECCCSSSSSCEEEECCSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTE---ESSS-SCHHHH
T ss_pred cccceeEEEEEEeCCCCccCEEEecccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCE---ECCC-CCHHHH
Confidence 3456789999975 478888854 2347999999999999999999999999998642 2211 225667
Q ss_pred HHHhhcc--cCceEEEEeecCCc
Q 026827 151 MYTIRQR--VGPLLMKMQKRYGK 171 (232)
Q Consensus 151 ~~AIr~R--sGpv~LkLeR~~~~ 171 (232)
..+|+.. -.++.|.+.|.-.+
T Consensus 87 ~~~l~~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 87 NQLLRDSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp HHHHHHHTTTTCEEEEEEEECCC
T ss_pred HHHHHhCCCCCeEEEEEEECCcc
Confidence 7777754 35899999996543
No 85
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.28 E-value=1.3e-06 Score=61.35 Aligned_cols=78 Identities=23% Similarity=0.396 Sum_probs=56.2
Q ss_pred EEEEEecCc---ceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceE
Q 026827 86 EYEVEIEQP---YGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (232)
Q Consensus 86 eyeVeL~KP---LGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~ 162 (232)
..+|+|.|. +|+.+.. +.+++|..|.+++.|+++| |++||+|+++... .+-.. .+.++...|+.....+.
T Consensus 3 ~r~v~l~~~~~g~G~~~~~--~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~---~v~~~-~~~~~~~~l~~~~~~v~ 75 (83)
T 2kv8_A 3 VRSVEVARGRAGYGFTLSG--QAPCVLSCVMRGSPADFVG-LRAGDQILAVNEI---NVKKA-SHEDVVKLIGKCSGVLH 75 (83)
T ss_dssp EEEEEECCCSSCCSCBCCC--SSSCBCCBCCTTSTTTTTT-CCTTCEEEEETTE---ECSSC-CHHHHHHHHTTCSSCEE
T ss_pred cEEEEEEeCCCcccEEEEc--CCCeEEEEeCCCChHHHcC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHhCCCeEE
Confidence 356677654 4554433 3479999999999999999 9999999998743 33222 23667777776557799
Q ss_pred EEEeecCC
Q 026827 163 MKMQKRYG 170 (232)
Q Consensus 163 LkLeR~~~ 170 (232)
|.+.|..|
T Consensus 76 l~v~R~~g 83 (83)
T 2kv8_A 76 MVIAEGVG 83 (83)
T ss_dssp EEEECCCC
T ss_pred EEEEcCCC
Confidence 99998653
No 86
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.28 E-value=7.5e-06 Score=59.95 Aligned_cols=81 Identities=19% Similarity=0.345 Sum_probs=57.5
Q ss_pred ccccEEEEEecCc----ceeEEeeeCC--------CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhh
Q 026827 82 EKYEEYEVEIEQP----YGLKFAKGRD--------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR 149 (232)
Q Consensus 82 ~~~eeyeVeL~KP----LGL~Fee~~d--------GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~ 149 (232)
+.++.++|+|.|. +|+.+..+.+ .+++|..|.+++.|+ +| |++||+|+++-.. .+-....+ .
T Consensus 4 ~~~~~~~v~l~k~~~~glG~~i~~~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~---~v~~~~~~-~ 77 (107)
T 2h2b_A 4 MIWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGV---SMDNVEHA-F 77 (107)
T ss_dssp CCEEEEEEEEECBTTTBTCEEEEECTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTE---ECTTCCHH-H
T ss_pred ccceeEEEEEEeCCCCccCEEEecCcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCE---ECCCccHH-H
Confidence 5567788998875 7888886543 499999999999999 77 9999999998743 23222222 2
Q ss_pred HHHHhhcccCceEEEEeec
Q 026827 150 TMYTIRQRVGPLLMKMQKR 168 (232)
Q Consensus 150 t~~AIr~RsGpv~LkLeR~ 168 (232)
....++....++.|.+.|.
T Consensus 78 ~~~~~~~~g~~v~l~v~R~ 96 (107)
T 2h2b_A 78 AVQQLRKSGKNAKITIRRK 96 (107)
T ss_dssp HHHHHHTCCSEEEEEEEEE
T ss_pred HHHHhhCCCCEEEEEEEEC
Confidence 2233343346789999874
No 87
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.26 E-value=2.4e-06 Score=60.81 Aligned_cols=79 Identities=22% Similarity=0.429 Sum_probs=58.2
Q ss_pred EEEEec---CcceeEEeeeC--CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCce
Q 026827 87 YEVEIE---QPYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (232)
Q Consensus 87 yeVeL~---KPLGL~Fee~~--dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv 161 (232)
..|+|. .++|+.+..+. +.+++|..|.+++.|+++|.|++||+|+++-.. .+-.. .+.++...++...+++
T Consensus 7 r~v~l~k~~~glG~~l~~~~~~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~---~v~~~-~~~~~~~~~~~~~~~v 82 (93)
T 2dkr_A 7 GVVELPKTDEGLGFNIMGGKEQNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGV---SVEGE-QHEKAVELLKAAQGSV 82 (93)
T ss_dssp CEEEEECCTTCCCEEEECSSSSSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTE---ECTTS-CHHHHHHHHHHCCSEE
T ss_pred EEEEEEeCCCCccEEEecccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECCCC-CHHHHHHHHHhCCCcE
Confidence 345554 46889998643 469999999999999999669999999998642 22211 3456677777555788
Q ss_pred EEEEeecC
Q 026827 162 LMKMQKRY 169 (232)
Q Consensus 162 ~LkLeR~~ 169 (232)
.|.+.|..
T Consensus 83 ~l~v~r~~ 90 (93)
T 2dkr_A 83 KLVVRSGP 90 (93)
T ss_dssp EEEECCCC
T ss_pred EEEEEeCC
Confidence 99998864
No 88
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.26 E-value=2.2e-06 Score=61.56 Aligned_cols=73 Identities=22% Similarity=0.449 Sum_probs=57.2
Q ss_pred CcceeEEeeeC-CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeecC
Q 026827 93 QPYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRY 169 (232)
Q Consensus 93 KPLGL~Fee~~-dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~~ 169 (232)
.+||+.+.... +++++|..|.++|.|+++|.|++||+|+++... .+ ....+.++...|+...+++.|++.+..
T Consensus 15 ~~lG~~i~~~~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~---~v-~~~~~~~~~~~l~~~~~~v~l~v~~~~ 88 (93)
T 3o46_A 15 EPLGATIKKDEQTGAIIVARIMRGGAADRSGLIHVGDELREVNGI---PV-EDKRPEEIIQILAQSQGAITFKIIPGS 88 (93)
T ss_dssp SCCCEEEEECTTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTE---ES-TTSCHHHHHHHHHHCCEEEEEEEECC-
T ss_pred CCccEEEEecCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 47999998753 469999999999999999999999999998642 22 113455777888877788999988754
No 89
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.26 E-value=4.1e-06 Score=64.40 Aligned_cols=72 Identities=21% Similarity=0.371 Sum_probs=54.9
Q ss_pred cCcceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc--ccCceEEEEeec
Q 026827 92 EQPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ--RVGPLLMKMQKR 168 (232)
Q Consensus 92 ~KPLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~--RsGpv~LkLeR~ 168 (232)
..+||+.+..+.+.+++|..|.|++.|+++| |++||+|+++-.. .+-.. ...++..+|.. ...++.|.++|.
T Consensus 38 ~~~lG~~l~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~---~v~~~-~~~~~~~~l~~~~~g~~v~l~v~R~ 111 (124)
T 3tsv_A 38 GDSVGLRLAGGNDVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNV---DFTNI-IREEAVLFLLDLPKGEEVTILAQKK 111 (124)
T ss_dssp SSCCCEEEEECTTSCEEEEEECTTCHHHHTT-CCTTEEEEEETTE---ECSSC-CHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred CCceeEEEecCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 4589999988778899999999999999999 9999999998643 22111 12556666663 335789999884
No 90
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.26 E-value=2e-06 Score=59.10 Aligned_cols=66 Identities=26% Similarity=0.413 Sum_probs=52.4
Q ss_pred cCcceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeecc--chhhHHHHhhcccCceEEEEee
Q 026827 92 EQPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAA--EYGRTMYTIRQRVGPLLMKMQK 167 (232)
Q Consensus 92 ~KPLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~--~~G~t~~AIr~RsGpv~LkLeR 167 (232)
.+++|+.+. ++++|.+|.+++.|+++|.|++||+|+++... +.. .+.++..+|+...+++.|.+.|
T Consensus 12 ~~~~g~~~~----~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~------~v~~~~~~~~~~~l~~~~~~v~l~v~R 79 (81)
T 2rcz_A 12 NEEYGLRLA----SHIFVKEISQDSLAARDGNIQEGDVVLKINGT------VTENMSLTDAKTLIERSKGKLKMVVQR 79 (81)
T ss_dssp TCCCCEEEE----EEEEEEEECTTSHHHHHSSCCTTCEEEEETTE------ECTTCCHHHHHHHHHTSTTEEEEEEEC
T ss_pred CCCCCEEEe----CCEEEEEECCCChHHHCCCCCCCCEEEEECCE------ECCCCCHHHHHHHHHCCCCeEEEEEEe
Confidence 457787776 68999999999999999989999999998642 333 5566777787656788888877
No 91
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.26 E-value=3.1e-06 Score=61.00 Aligned_cols=70 Identities=19% Similarity=0.334 Sum_probs=53.8
Q ss_pred cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeecCCc
Q 026827 94 PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRYGK 171 (232)
Q Consensus 94 PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~~~~ 171 (232)
++|+.+. +++||..|.++|.|+++|.+++||+|+.+... .+ ......++...|+...+.+.|++.++...
T Consensus 14 ~~G~~~~----~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~---~v-~~~~~~~~~~~i~~~~~~v~L~v~~~~~~ 83 (88)
T 3e17_A 14 EYGLRLG----SQIFVKEMTRTGLATKDGNLHEGDIILKINGT---VT-ENMSLTDARKLIEKSRGKLQLVVLRDLEH 83 (88)
T ss_dssp CCCEEEE----EEEEEEEECTTSHHHHHCCCCTTCEEEEETTE---EC-TTCCHHHHHHHHHHTTTEEEEEECCC---
T ss_pred CCCEEEe----CCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHcCCCeEEEEEeCCCcc
Confidence 5677664 48999999999999999999999999998753 22 11345577888988888999998886654
No 92
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.25 E-value=4.9e-06 Score=64.39 Aligned_cols=71 Identities=21% Similarity=0.328 Sum_probs=53.7
Q ss_pred cceeEEeeeC---C--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhccc--CceEEEEe
Q 026827 94 PYGLKFAKGR---D--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV--GPLLMKMQ 166 (232)
Q Consensus 94 PLGL~Fee~~---d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~Rs--Gpv~LkLe 166 (232)
+||+.+..+. . .++||..|.+++.|+++|.|++||+|+++-.. .+ .-..+.++...|+... ..|.|++.
T Consensus 49 ~lG~~i~gg~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~---~v-~~~~~~~~~~~l~~~~~g~~v~l~v~ 124 (131)
T 1wfg_A 49 MLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGR---LL-QGATFEEVYNIILESKPEPQVELVVS 124 (131)
T ss_dssp TTTEEEEEEEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTE---EC-TTCCHHHHHHHHHHTSSSSEEEEEEE
T ss_pred CCCEEEecCccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHhcCCCCEEEEEEE
Confidence 3899996542 2 28999999999999999999999999998743 22 1123456777887643 67899998
Q ss_pred ec
Q 026827 167 KR 168 (232)
Q Consensus 167 R~ 168 (232)
|.
T Consensus 125 R~ 126 (131)
T 1wfg_A 125 RS 126 (131)
T ss_dssp EE
T ss_pred cC
Confidence 85
No 93
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.24 E-value=2.1e-06 Score=65.59 Aligned_cols=81 Identities=19% Similarity=0.301 Sum_probs=61.3
Q ss_pred cEEEEEecC----cceeEEeeeCC-----CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhh
Q 026827 85 EEYEVEIEQ----PYGLKFAKGRD-----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155 (232)
Q Consensus 85 eeyeVeL~K----PLGL~Fee~~d-----GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr 155 (232)
+..+|+|.| ++|+.+..+.+ .++||..|.++|.|+++|.|++||+|+++-.. .+-.. ..-+++..|+
T Consensus 24 ~~~~v~l~k~~~~~lGf~i~gg~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~---~v~~~-~~~~~~~~l~ 99 (120)
T 2iwo_A 24 GLRTVEMKKGPTDSLGISIAGGVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGT---STEGM-THTQAVNLLK 99 (120)
T ss_dssp -CEEEEEEC----CCCEEEEEEEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTE---ECTTC-BHHHHHHHHH
T ss_pred CcEEEEEEcCCCCCCCEEEecccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCE---ECCCC-CHHHHHHHHH
Confidence 446777765 78899887643 38999999999999999559999999998753 22211 3556777888
Q ss_pred cccCceEEEEeecC
Q 026827 156 QRVGPLLMKMQKRY 169 (232)
Q Consensus 156 ~RsGpv~LkLeR~~ 169 (232)
...+.+.|++.|..
T Consensus 100 ~~~~~v~l~v~r~g 113 (120)
T 2iwo_A 100 NASGSIEMQVVAGG 113 (120)
T ss_dssp HCCSEEEEEEECCT
T ss_pred cCCCeEEEEEEECC
Confidence 76778999998853
No 94
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.24 E-value=4.4e-06 Score=59.35 Aligned_cols=79 Identities=24% Similarity=0.413 Sum_probs=56.9
Q ss_pred cEEEEEecC--cceeEEeeeC--CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCc
Q 026827 85 EEYEVEIEQ--PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP 160 (232)
Q Consensus 85 eeyeVeL~K--PLGL~Fee~~--dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGp 160 (232)
++++|++++ ++|+.+..+. +.+++|..|.|++.|+++| |++||+|+++-.. .+-.. .+.++...++....+
T Consensus 3 ~~~~v~~~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~---~v~~~-~~~~~~~~~~~~g~~ 77 (89)
T 2q3g_A 3 DSFKVVLEGPAPWGFRLQGGKDFNVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGE---NAGSL-THIEAQNKIRACGER 77 (89)
T ss_dssp EEEEEEEESSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTE---EGGGC-CHHHHHHHHHTCTTE
T ss_pred cEEEEEEcCCCcccEEEECcCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHhCCCE
Confidence 456666654 5677776543 3489999999999999999 9999999998643 22211 345666777755567
Q ss_pred eEEEEeec
Q 026827 161 LLMKMQKR 168 (232)
Q Consensus 161 v~LkLeR~ 168 (232)
+.|.+.|.
T Consensus 78 v~l~v~R~ 85 (89)
T 2q3g_A 78 LSLGLSRA 85 (89)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEeC
Confidence 88999884
No 95
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.24 E-value=2.6e-06 Score=65.33 Aligned_cols=82 Identities=11% Similarity=0.221 Sum_probs=61.0
Q ss_pred ccEEEEEecC---cceeEEeeeCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc-
Q 026827 84 YEEYEVEIEQ---PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR- 157 (232)
Q Consensus 84 ~eeyeVeL~K---PLGL~Fee~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R- 157 (232)
-+.++|+|.| .+|+.+..+.+ .+++|..|.+++.|+++|.|++||+|+++-.. .+ .-..+.++..+|+..
T Consensus 17 g~~~~v~l~~~~~g~G~~i~g~~~~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~---~v-~~~~~~~~~~~l~~~~ 92 (129)
T 2kpk_A 17 GKFIHTKLRKSSRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDT---CV-LGHTHAQVVKIFQSIP 92 (129)
T ss_dssp SEEEEEEEEECSSCCSEEEEEEEETTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTE---EC-TTSCHHHHHHHHHHSC
T ss_pred CcEEEEEEEECCCcccEEEeCccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHhCC
Confidence 3557777765 58888886543 37999999999999999999999999998642 11 111344667777754
Q ss_pred -cCceEEEEeecC
Q 026827 158 -VGPLLMKMQKRY 169 (232)
Q Consensus 158 -sGpv~LkLeR~~ 169 (232)
..++.|++.|..
T Consensus 93 ~g~~v~l~v~R~~ 105 (129)
T 2kpk_A 93 IGASVDLELCRGY 105 (129)
T ss_dssp TTEEEEEEEEECS
T ss_pred CCCeEEEEEEeCC
Confidence 356899999865
No 96
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.24 E-value=3.9e-06 Score=59.42 Aligned_cols=66 Identities=26% Similarity=0.407 Sum_probs=52.3
Q ss_pred CcceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeecc--chhhHHHHhhcccCceEEEEeec
Q 026827 93 QPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAA--EYGRTMYTIRQRVGPLLMKMQKR 168 (232)
Q Consensus 93 KPLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~--~~G~t~~AIr~RsGpv~LkLeR~ 168 (232)
+++|+.+. .+++|..|.+++.|+++|.|++||+|+++... +.. .+.++..+|+...+++.|.+.|.
T Consensus 15 ~~~g~~~~----~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~------~v~~~~~~~~~~~l~~~~~~v~l~v~r~ 82 (92)
T 3cyy_A 15 EEYGLRLA----SHIFVKEISQDSLAARDGNIQEGDVVLKINGT------VTENMSLTDAKTLIERSKGKLKMVVQRD 82 (92)
T ss_dssp SCCCEEEE----EEEEEEEECTTCHHHHSCCCCTTCEEEEETTE------ECTTCCHHHHHHHHHTTTTEEEEEEEC-
T ss_pred CCCCEEEe----CCEEEEEECCCChHHhcCCCCCCCEEEEECCE------ECCCCCHHHHHHHHHcCCCcEEEEEEeC
Confidence 36788776 68999999999999999989999999998742 333 55667777876567889999873
No 97
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.23 E-value=1.6e-06 Score=63.49 Aligned_cols=83 Identities=16% Similarity=0.363 Sum_probs=61.4
Q ss_pred ccccEEEEEecC--cceeEEeeeCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc
Q 026827 82 EKYEEYEVEIEQ--PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (232)
Q Consensus 82 ~~~eeyeVeL~K--PLGL~Fee~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R 157 (232)
....++.|++.+ ++|+.+..+.+ .+++|..|.+++.|+++|.|++||+|+++-.. .+... +.+++..++..
T Consensus 8 ~~~~~~~v~~~~~~~~G~~~~gg~~~~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~---~v~~~--~~~~~~~~~~~ 82 (100)
T 2edp_A 8 GSFQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVNINGT---PLYGS--RQEALILIKGS 82 (100)
T ss_dssp CCCEEEEEECCSCSCCCCCEEEEGGGTEEEEECCCCTTSHHHHHTSCCTTCEEEEETTE---ECCSC--SHHHHHHHHTC
T ss_pred CCcEEEEEEECCCCCcCEEEeccCCCCCCeEEEEECCCCHHHHcCCCCCCCEEEEECCE---Eccch--HHHHHHHHHhC
Confidence 345678888864 68888876533 37999999999999999449999999998743 33221 45566777765
Q ss_pred cCceEEEEeecC
Q 026827 158 VGPLLMKMQKRY 169 (232)
Q Consensus 158 sGpv~LkLeR~~ 169 (232)
..++.|.+.|.-
T Consensus 83 ~~~v~l~v~R~~ 94 (100)
T 2edp_A 83 FRILKLIVRRRN 94 (100)
T ss_dssp CSSCEEEEEECC
T ss_pred CCeEEEEEEeCC
Confidence 578899999853
No 98
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.23 E-value=5.1e-06 Score=61.98 Aligned_cols=82 Identities=20% Similarity=0.308 Sum_probs=60.3
Q ss_pred cccEEEEEecC----cceeEEeeeC----CC-----CeEEEEeCCCCCccc-ccccccCcEEEEeecccCCceeeccchh
Q 026827 83 KYEEYEVEIEQ----PYGLKFAKGR----DG-----GTYIDAIAPGGSADK-TGMFQVGDKVLATSAVFGTEIWPAAEYG 148 (232)
Q Consensus 83 ~~eeyeVeL~K----PLGL~Fee~~----dG-----gvyV~eV~pGGNAaK-aG~I~VGD~LvatSA~FGdElWpA~~~G 148 (232)
.++.++|.|.| ++|+.+.... .| .++|..|.+++.|++ +| |++||+|+++... .+... .+.
T Consensus 8 ~~~~~~v~l~~~~~~~lGf~l~~~~~~~~~g~~~~~~~~V~~V~~~spA~~~ag-L~~GD~I~~ing~---~v~~~-~~~ 82 (114)
T 1uew_A 8 SLQTSDVVIHRKENEGFGFVIISSLNRPESGSTITVPHKIGRIIDGSPADRCAK-LKVGDRILAVNGQ---SIINM-PHA 82 (114)
T ss_dssp CCCCEEEEEECCTTSCCCEEEECCCCSCCSSCCSCCSCEEEEECTTCTTGGGSS-CCTTCBEEEETTB---CTTTS-CHH
T ss_pred cccceEEEEEECCCCCCCEEEEeecccCCCCcccccCeEEEEECCCChHHHhCC-CCCCCEEEEECCE---ECCCC-CHH
Confidence 44667888865 5899997542 23 569999999999999 77 9999999998753 33221 245
Q ss_pred hHHHHhhcccCceEEEEeecC
Q 026827 149 RTMYTIRQRVGPLLMKMQKRY 169 (232)
Q Consensus 149 ~t~~AIr~RsGpv~LkLeR~~ 169 (232)
++..+|+....++.|.+.|.-
T Consensus 83 ~~~~~l~~~g~~v~l~v~r~~ 103 (114)
T 1uew_A 83 DIVKLIKDAGLSVTLRIIPQE 103 (114)
T ss_dssp HHHHHHHHTTTEEEEEECCCS
T ss_pred HHHHHHHcCCCeEEEEEEeCC
Confidence 677778765567899998853
No 99
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.23 E-value=4e-06 Score=60.94 Aligned_cols=70 Identities=20% Similarity=0.447 Sum_probs=52.9
Q ss_pred cceeEEeee--------------CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhccc-
Q 026827 94 PYGLKFAKG--------------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV- 158 (232)
Q Consensus 94 PLGL~Fee~--------------~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~Rs- 158 (232)
.||+.+.-+ .+.|++|..|.+++.|+++| |++||+|+++... .+-.. .+.++..+|+...
T Consensus 20 ~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~---~v~~~-~~~~~~~~l~~~~g 94 (104)
T 3sfj_A 20 ILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGW---DMTMV-THDQARKRLTKRSE 94 (104)
T ss_dssp ECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTE---ECTTC-CHHHHHHHHTCTTC
T ss_pred cccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHhCCC
Confidence 499998832 24589999999999999999 9999999998642 33222 3557778887644
Q ss_pred CceEEEEeec
Q 026827 159 GPLLMKMQKR 168 (232)
Q Consensus 159 Gpv~LkLeR~ 168 (232)
.++.|.+.|+
T Consensus 95 ~~v~l~v~R~ 104 (104)
T 3sfj_A 95 EVVRLLVTRQ 104 (104)
T ss_dssp SEEEEEEEEC
T ss_pred CEEEEEEEcC
Confidence 5788988874
No 100
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.23 E-value=7.5e-07 Score=64.54 Aligned_cols=83 Identities=19% Similarity=0.416 Sum_probs=61.8
Q ss_pred ccEEEEEecC---cceeEEeeeCCC--CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhccc
Q 026827 84 YEEYEVEIEQ---PYGLKFAKGRDG--GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (232)
Q Consensus 84 ~eeyeVeL~K---PLGL~Fee~~dG--gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~Rs 158 (232)
++.+.|++.| .+|+.+..+.+. +++|..|.+++.|+++|.|++||+|+++... .+-.. .+.++...++...
T Consensus 10 ~~~~~v~l~~~~~g~G~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~---~v~~~-~~~~~~~~~~~~g 85 (103)
T 1wfv_A 10 FDYFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGE---STRDM-THARAIELIKSGG 85 (103)
T ss_dssp SCCEECCEECCTTSSSBCCEEETTTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTE---ECSSC-CHHHHHHHHHHHC
T ss_pred ceEEEEEEecCCCcCCEEEeccccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE---ECCCC-CHHHHHHHHHcCC
Confidence 4567788865 588888876553 8999999999999999999999999998742 23222 2445666777444
Q ss_pred CceEEEEeecCC
Q 026827 159 GPLLMKMQKRYG 170 (232)
Q Consensus 159 Gpv~LkLeR~~~ 170 (232)
.++.|.+.|.-.
T Consensus 86 ~~v~l~v~R~~~ 97 (103)
T 1wfv_A 86 RRVRLLLKRGTG 97 (103)
T ss_dssp SEECEEEECTTC
T ss_pred CeEEEEEEECCC
Confidence 678999988544
No 101
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.22 E-value=5.4e-06 Score=62.09 Aligned_cols=82 Identities=21% Similarity=0.355 Sum_probs=60.4
Q ss_pred ccccEEEEEec----CcceeEEeeeCC--------CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhh
Q 026827 82 EKYEEYEVEIE----QPYGLKFAKGRD--------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR 149 (232)
Q Consensus 82 ~~~eeyeVeL~----KPLGL~Fee~~d--------GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~ 149 (232)
..++.++|+|. .++|+.+..+.+ .++||..|.+++.|+ +| |++||+|+++... .+-.. ..-+
T Consensus 11 ~~~~~~~v~l~k~~~~glG~~i~gg~~~~~~~~~~~gv~V~~V~~~spA~-~g-L~~GD~I~~Vng~---~v~~~-~~~~ 84 (117)
T 2csj_A 11 VIWEQYTVTLQKDSKRGFGIAVSGGRDNPHFENGETSIVISDVLPGGPAD-GL-LQENDRVVMVNGT---PMEDV-LHSF 84 (117)
T ss_dssp EEEEEEEEEEECCSSSTTCEEEECCSSCCCCSSCCCBCEEEEECTTSSHH-HH-BCTTCEEEEESSC---BCBTC-CHHH
T ss_pred ccceEEEEEEEECCCCccCEEEeCCcCCccccCCCCCEEEEEECCCCccc-cc-CCCCCEEEEECCE---ECCCc-CHHH
Confidence 55677888885 468899887643 389999999999996 65 9999999998742 33222 2345
Q ss_pred HHHHhhcccCceEEEEeecC
Q 026827 150 TMYTIRQRVGPLLMKMQKRY 169 (232)
Q Consensus 150 t~~AIr~RsGpv~LkLeR~~ 169 (232)
+..+|+....++.|.+.|+-
T Consensus 85 ~~~~l~~~~~~v~l~v~R~~ 104 (117)
T 2csj_A 85 AVQQLRKSGKIAAIVVKRPR 104 (117)
T ss_dssp HHHHHHHSCSEEEEEEEEEE
T ss_pred HHHHHhcCCCeEEEEEEECC
Confidence 66677765678899998853
No 102
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.22 E-value=4.2e-06 Score=59.77 Aligned_cols=79 Identities=22% Similarity=0.315 Sum_probs=57.6
Q ss_pred EEEEecC---cceeEEeeeCCC-CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceE
Q 026827 87 YEVEIEQ---PYGLKFAKGRDG-GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (232)
Q Consensus 87 yeVeL~K---PLGL~Fee~~dG-gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~ 162 (232)
-.|+|.| .+|+.+....+. +++|..|.+++.|+++| |++||+|+++... .+-. ..+.++...|+...+.+.
T Consensus 7 r~v~l~~~~~~~G~~l~~~~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~---~v~~-~~~~~~~~~l~~~~~~~~ 81 (95)
T 3r68_A 7 RVVVIKKGSNGYGFYLRAGPEQKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGK---SVEA-LDHDGVVEMIRKGGDQTT 81 (95)
T ss_dssp EEEEEECBTTBCSCEEEEC--CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTE---ECTT-CCHHHHHHHHHTTTTEEE
T ss_pred EEEEEecCCCcccEEEEecCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCE---ECCC-CCHHHHHHHHHhCCCeEE
Confidence 3455554 688998876443 99999999999999999 9999999998742 2211 133677788888677888
Q ss_pred EEEeecCC
Q 026827 163 MKMQKRYG 170 (232)
Q Consensus 163 LkLeR~~~ 170 (232)
+.+.|+-+
T Consensus 82 ~~~~r~~~ 89 (95)
T 3r68_A 82 LLVLDKEL 89 (95)
T ss_dssp EEEEECC-
T ss_pred EEEECCcc
Confidence 88777654
No 103
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.21 E-value=4e-06 Score=62.81 Aligned_cols=84 Identities=18% Similarity=0.256 Sum_probs=60.8
Q ss_pred ccccEEEEEecC----cceeEEeeeCC---CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHh
Q 026827 82 EKYEEYEVEIEQ----PYGLKFAKGRD---GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (232)
Q Consensus 82 ~~~eeyeVeL~K----PLGL~Fee~~d---GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AI 154 (232)
...+.+.|.|.| ++|+.+..+.+ .+++|..|.+++-|+++|.|++||+|+++-.. .+-. ..+.++..+|
T Consensus 12 ~~~~~~~v~l~~~~~~~lG~~i~g~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~---~v~~-~~~~~~~~~l 87 (119)
T 1x6d_A 12 QLDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGLASQEGTIQKGNEVLSINGK---SLKG-TTHHDALAIL 87 (119)
T ss_dssp SCTTEEEEEEECCTTSCCSEEEECCSSSSCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTE---ECSS-CCHHHHHHHH
T ss_pred CCCCeEEEEEEeCCCCccCEEEeCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCE---ECCC-CCHHHHHHHH
Confidence 344567777766 68999987643 48999999999999999999999999997642 3321 2455677777
Q ss_pred hcccCce-EEEEeecC
Q 026827 155 RQRVGPL-LMKMQKRY 169 (232)
Q Consensus 155 r~RsGpv-~LkLeR~~ 169 (232)
+...+.+ .|.+.|..
T Consensus 88 ~~~~~~~~~l~v~R~~ 103 (119)
T 1x6d_A 88 RQAREPRQAVIVTRKL 103 (119)
T ss_dssp HHTTSSSEEEEEEECC
T ss_pred HhCCCCeEEEEEEcCC
Confidence 7655555 46676643
No 104
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.20 E-value=7.3e-06 Score=60.51 Aligned_cols=79 Identities=19% Similarity=0.354 Sum_probs=57.1
Q ss_pred EEEEEec----CcceeEEeeeCC--------------CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccch
Q 026827 86 EYEVEIE----QPYGLKFAKGRD--------------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEY 147 (232)
Q Consensus 86 eyeVeL~----KPLGL~Fee~~d--------------GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~ 147 (232)
...|+|. .++|+.+..+.+ .+++|..|.+++.|+++| |++||+|+++... .+-.. .+
T Consensus 8 ~~~v~l~~~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~---~v~~~-~~ 82 (109)
T 1q3o_A 8 EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQ---NVVKV-GH 82 (109)
T ss_dssp EEEEEEECCTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTE---ECTTC-CH
T ss_pred cEEEEEEECCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCC-CH
Confidence 3456665 368999887643 179999999999999999 9999999998752 22111 23
Q ss_pred hhHHHHhhcccCceEEEEeecC
Q 026827 148 GRTMYTIRQRVGPLLMKMQKRY 169 (232)
Q Consensus 148 G~t~~AIr~RsGpv~LkLeR~~ 169 (232)
.++...|+.....+.|.+.|.-
T Consensus 83 ~~~~~~l~~~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 83 RQVVNMIRQGGNTLMVKVVMVT 104 (109)
T ss_dssp HHHHHHHHHTTTEEEEEEEEEE
T ss_pred HHHHHHHHhCCCEEEEEEEECC
Confidence 5666777754567888887754
No 105
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.19 E-value=1.1e-06 Score=65.26 Aligned_cols=81 Identities=20% Similarity=0.384 Sum_probs=61.3
Q ss_pred EEEEec----CcceeEEeeeCC-----------CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHH
Q 026827 87 YEVEIE----QPYGLKFAKGRD-----------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTM 151 (232)
Q Consensus 87 yeVeL~----KPLGL~Fee~~d-----------GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~ 151 (232)
.+|+|. .+||+.+..+.+ .++||..|.+++.|+++|.|++||+|+++... .+-.. .+.+++
T Consensus 11 ~~v~l~k~~~~~lG~~i~gg~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~---~v~~~-~~~~~~ 86 (111)
T 1uju_A 11 RELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQ---SLLGL-THGEAV 86 (111)
T ss_dssp SCEEEECCTTCCCCEEEECCSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSC---BCTTS-CHHHHH
T ss_pred EEEEEEECCCCccCEEEECCccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECCCC-CHHHHH
Confidence 445553 468999987542 38999999999999999999999999998743 33222 556777
Q ss_pred HHhhcccCceEEEEeecCCc
Q 026827 152 YTIRQRVGPLLMKMQKRYGK 171 (232)
Q Consensus 152 ~AIr~RsGpv~LkLeR~~~~ 171 (232)
.+|+....++.|.+.|.+-+
T Consensus 87 ~~l~~~g~~v~l~v~r~~~~ 106 (111)
T 1uju_A 87 QLLRSVGDTLTVLVCDGFES 106 (111)
T ss_dssp HHHSSCSSEEEECCCCCCCC
T ss_pred HHHHcCCCeEEEEEEECCCC
Confidence 88887557889999987654
No 106
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.19 E-value=6.5e-06 Score=59.54 Aligned_cols=75 Identities=12% Similarity=0.228 Sum_probs=55.7
Q ss_pred EEEEEecC----cceeEEee-------eCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccc--hhhH
Q 026827 86 EYEVEIEQ----PYGLKFAK-------GRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRT 150 (232)
Q Consensus 86 eyeVeL~K----PLGL~Fee-------~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~--~G~t 150 (232)
..+|+|.| ++|+.+.. +.+ .+++|..|.+++.|+++| |++||+|+++... +... +.++
T Consensus 5 ~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~------~v~~~~~~~~ 77 (96)
T 2ego_A 5 RKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGL------NVEGIRHREI 77 (96)
T ss_dssp EEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTE------ECTTCCHHHH
T ss_pred cEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCE------ECCCCCHHHH
Confidence 46677765 67888875 222 389999999999999999 9999999998742 2223 4667
Q ss_pred HHHhhcccCceEEEEee
Q 026827 151 MYTIRQRVGPLLMKMQK 167 (232)
Q Consensus 151 ~~AIr~RsGpv~LkLeR 167 (232)
..+|+...+++.|++.+
T Consensus 78 ~~~l~~~~~~v~l~v~~ 94 (96)
T 2ego_A 78 VDIIKASGNVLRLETLY 94 (96)
T ss_dssp HHHHHHTTTEEEEEEEC
T ss_pred HHHHHhCCCeEEEEEEE
Confidence 77787666688888765
No 107
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.18 E-value=5.3e-06 Score=61.62 Aligned_cols=75 Identities=27% Similarity=0.442 Sum_probs=58.0
Q ss_pred cCcceeEEeeeC-------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEE
Q 026827 92 EQPYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMK 164 (232)
Q Consensus 92 ~KPLGL~Fee~~-------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~Lk 164 (232)
..++|+.+.-+. +.++||..|.+++.|+++|.|++||+|+++... .+-. ....++..+++...+++.|+
T Consensus 12 ~~~~Gf~i~gG~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~---~v~~-~~~~~~~~~l~~~~~~v~l~ 87 (106)
T 4amh_A 12 SKGLGFSIAGGVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNV---ALEE-VTHEEAVTALKNTSDFVYLK 87 (106)
T ss_dssp CCCSCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ECSS-CCHHHHHHHHHSCCSEEEEE
T ss_pred CCccCEEEEeccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHhCCCCeEEEE
Confidence 468899998653 238999999999999999999999999998753 2211 23446677888767789999
Q ss_pred EeecCC
Q 026827 165 MQKRYG 170 (232)
Q Consensus 165 LeR~~~ 170 (232)
+.|.-.
T Consensus 88 v~R~~~ 93 (106)
T 4amh_A 88 VAKPGS 93 (106)
T ss_dssp EECCSS
T ss_pred EEeCCC
Confidence 999643
No 108
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.18 E-value=5.1e-06 Score=61.29 Aligned_cols=83 Identities=22% Similarity=0.332 Sum_probs=61.6
Q ss_pred EEEEEecC----cceeEEeeeCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccC
Q 026827 86 EYEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVG 159 (232)
Q Consensus 86 eyeVeL~K----PLGL~Fee~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsG 159 (232)
...|+|.| ++|+.+.-+.+ .+++|..|.+++.|++++.|++||+|+++... .+-. ..+.++...|+...+
T Consensus 10 ~~~v~l~~~~~~~lG~~l~~g~~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~---~v~~-~~~~~~~~~l~~~~~ 85 (103)
T 2dc2_A 10 IRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGV---NLRD-TKHKEAVTILSQQRG 85 (103)
T ss_dssp EEEEEEECCSSSCCCEEEEEEGGGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTE---ESTT-SCHHHHHHHHHHCCS
T ss_pred cEEEEEEeCCCCccCEEEEeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHhCCC
Confidence 35666654 68899886543 38999999999999997349999999998743 3322 246678888887778
Q ss_pred ceEEEEeecCCcc
Q 026827 160 PLLMKMQKRYGKM 172 (232)
Q Consensus 160 pv~LkLeR~~~~~ 172 (232)
.+.|++.|.+...
T Consensus 86 ~v~l~v~~~~~~~ 98 (103)
T 2dc2_A 86 EIEFEVVYVALEH 98 (103)
T ss_dssp EEEEEEEECC---
T ss_pred cEEEEEEecCCcc
Confidence 9999999987643
No 109
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.18 E-value=9.1e-06 Score=61.17 Aligned_cols=85 Identities=25% Similarity=0.431 Sum_probs=62.5
Q ss_pred ccccEEEEEecC----------cceeEEeeeCC-------CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeec
Q 026827 82 EKYEEYEVEIEQ----------PYGLKFAKGRD-------GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPA 144 (232)
Q Consensus 82 ~~~eeyeVeL~K----------PLGL~Fee~~d-------GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA 144 (232)
-+....+|+|.| +||+.+..+.+ -++||..|.+++.|+++|.|++||+|+.+... .+-.
T Consensus 9 ~~~~~~~v~l~r~~~~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~---~v~~- 84 (117)
T 1ujd_A 9 YIFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGI---PLTS- 84 (117)
T ss_dssp CSSCEEEEEECCCSSSSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTE---ECTT-
T ss_pred CCCceEEEEEEecCcccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---EcCC-
Confidence 344455666655 47898876543 17999999999999999999999999998743 2211
Q ss_pred cchhhHHHHhhcccCceEEEEeecCC
Q 026827 145 AEYGRTMYTIRQRVGPLLMKMQKRYG 170 (232)
Q Consensus 145 ~~~G~t~~AIr~RsGpv~LkLeR~~~ 170 (232)
..+-++..+|+....++.|.++|...
T Consensus 85 ~~~~~~~~~l~~~~~~v~l~v~R~~~ 110 (117)
T 1ujd_A 85 KTYEEVQSIISQQSGEAEICVRLDLN 110 (117)
T ss_dssp CCHHHHHHHHSCCSSCEEEEEESSCC
T ss_pred CCHHHHHHHHhcCCCEEEEEEEECCc
Confidence 23456777888766789999998543
No 110
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.17 E-value=4.1e-06 Score=62.74 Aligned_cols=81 Identities=19% Similarity=0.321 Sum_probs=59.6
Q ss_pred cEEEEEecC----cceeEEeeeCC--CCeEEEEeCCCCCcccc-cccccCcEEEEeecccCCceeeccchhhHHHHhhcc
Q 026827 85 EEYEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADKT-GMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (232)
Q Consensus 85 eeyeVeL~K----PLGL~Fee~~d--GgvyV~eV~pGGNAaKa-G~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R 157 (232)
+...|+|.| ++|+.+..+.+ .++||..|.+++.|+++ |.|++||+|+++-.. .+=. ..+-++...|+..
T Consensus 15 ~~~~v~l~k~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~---~v~~-~~~~~~~~~~~~~ 90 (119)
T 2cs5_A 15 NLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGR---DIAE-HTHDQVVLFIKAS 90 (119)
T ss_dssp CCEEEEECCCSSSCCSEEEEEEGGGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTB---CTTS-SCHHHHHHHHHHH
T ss_pred CeEEEEEEeCCCCCcCEEEecccCCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHhc
Confidence 457788887 68999987643 37999999999999999 349999999998742 2211 1345566677654
Q ss_pred c----CceEEEEeecC
Q 026827 158 V----GPLLMKMQKRY 169 (232)
Q Consensus 158 s----Gpv~LkLeR~~ 169 (232)
. .++.|.+.|..
T Consensus 91 ~~~~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 91 CERHSGELMLLVRPNA 106 (119)
T ss_dssp HHCCSSCEEEEEECCC
T ss_pred cccCCCEEEEEEEccc
Confidence 2 48999998853
No 111
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.17 E-value=8.9e-06 Score=64.98 Aligned_cols=82 Identities=12% Similarity=0.209 Sum_probs=60.5
Q ss_pred ccEEEEEecC---cceeEEeeeCC----CCeEEEEeCCCCCcccccccccCcEEEEeecccCCce--eeccchhhHHHHh
Q 026827 84 YEEYEVEIEQ---PYGLKFAKGRD----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEI--WPAAEYGRTMYTI 154 (232)
Q Consensus 84 ~eeyeVeL~K---PLGL~Fee~~d----GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdEl--WpA~~~G~t~~AI 154 (232)
-+++.|+|.| +||+.+..+.+ .++||..|.+++-|+++|.|++||+|+++... .+ |... .-.++.++
T Consensus 17 ~~~~~v~~~~~~~~lG~~i~~g~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~---~v~~~~~~-~~~~~~~~ 92 (206)
T 3r0h_A 17 NKKILIELKVEKKPMGVIVCGGKNNHVTTGCVITHVYPEGQVAADKRLKIFDHICDINGT---PIHVGSMT-TLKVHQLF 92 (206)
T ss_dssp TSCEEEEEECTTSCCCEEEECCSSSSCCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ECCGGGSC-HHHHHHHH
T ss_pred CCEEEEEEEeCCCCcCEEEecccCCCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCE---EcCCCccC-HHHHHHHH
Confidence 3567788855 89999986543 37999999999999999999999999998643 33 3342 33555677
Q ss_pred hcccCc-eEEEEeecC
Q 026827 155 RQRVGP-LLMKMQKRY 169 (232)
Q Consensus 155 r~RsGp-v~LkLeR~~ 169 (232)
+...+. +.|.+.|.-
T Consensus 93 ~~~~~~~v~l~v~R~~ 108 (206)
T 3r0h_A 93 HTTYEKAVTLTVFRAD 108 (206)
T ss_dssp HSCCSSEEEEEEECCS
T ss_pred HhcCCCceEEEEEecc
Confidence 765555 788887753
No 112
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.17 E-value=9.1e-06 Score=64.91 Aligned_cols=84 Identities=14% Similarity=0.241 Sum_probs=63.3
Q ss_pred cEEEEEecC----cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCc
Q 026827 85 EEYEVEIEQ----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP 160 (232)
Q Consensus 85 eeyeVeL~K----PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGp 160 (232)
..++|++.| .||+.+.. .+.++||..|.+++.|+++|.|++||+|+++... .|-.. .+.++...++...++
T Consensus 113 ~~~~v~l~~~~~~~lG~~~~~-~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~---~v~~~-~~~~~~~~l~~~~~~ 187 (206)
T 3r0h_A 113 EKFNVDLMKKAGKELGLSLSP-NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGD---ALEGL-PFQVCYALFKGANGK 187 (206)
T ss_dssp EEEEEEEECCTTCCCCEEEEE-CSSCEEEEEECTTSCHHHHHHCCTTCEEEEETTE---ECTTC-CHHHHHHHHHTCCSE
T ss_pred cEEEEEEecCCCCccCeEEEc-CCceEEEEEECCCChHHHcCCCCCCCEEEEECCE---ECCCC-CHHHHHHHHHcCCCe
Confidence 456676643 57888875 3467999999999999999999999999998753 22111 235667788877789
Q ss_pred eEEEEeecCCccc
Q 026827 161 LLMKMQKRYGKME 173 (232)
Q Consensus 161 v~LkLeR~~~~~~ 173 (232)
+.|.+.|+.....
T Consensus 188 v~L~V~R~~~~~~ 200 (206)
T 3r0h_A 188 VSMEVTRPKPTLR 200 (206)
T ss_dssp EEEEEEEECCCCC
T ss_pred EEEEEEeCCCCCC
Confidence 9999999776543
No 113
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.16 E-value=6.1e-06 Score=58.21 Aligned_cols=77 Identities=23% Similarity=0.395 Sum_probs=55.1
Q ss_pred EEEEecC----cceeEEeeeC--CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCc
Q 026827 87 YEVEIEQ----PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGP 160 (232)
Q Consensus 87 yeVeL~K----PLGL~Fee~~--dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGp 160 (232)
++|+|.| ++|+.+..+. +.++||..|.|++.|++++.+++||+|+++... .+-. ..+.++...++...++
T Consensus 4 ~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~---~v~~-~~~~~~~~~~~~~~~~ 79 (87)
T 4e34_A 4 RKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGV---NLRD-TKHKEAVTILSQQRGE 79 (87)
T ss_dssp EEEEEECCTTBCCCEEEEEEGGGTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTE---ECTT-CCHHHHHHHHHHCCSE
T ss_pred EEEEEEECCCCcccEEEEccCCCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHcCCCe
Confidence 5666665 6888887653 237999999999999995339999999998742 3311 1445667777765567
Q ss_pred eEEEEee
Q 026827 161 LLMKMQK 167 (232)
Q Consensus 161 v~LkLeR 167 (232)
+.|++++
T Consensus 80 v~l~v~~ 86 (87)
T 4e34_A 80 IEFEVVY 86 (87)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8887764
No 114
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.15 E-value=9.1e-06 Score=63.50 Aligned_cols=82 Identities=23% Similarity=0.430 Sum_probs=58.4
Q ss_pred ccEEEEEec---CcceeEEeeeC-------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHH
Q 026827 84 YEEYEVEIE---QPYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYT 153 (232)
Q Consensus 84 ~eeyeVeL~---KPLGL~Fee~~-------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~A 153 (232)
++..+|+|. .+||+.+.-+. +.++||..|.|++-|+++|.|++||+|+++... .+..... -....+
T Consensus 4 ~~~~~v~l~~~~~~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~---~v~~~~~-~~~~~~ 79 (196)
T 3gsl_A 4 MEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEV---DVREVTH-SAAVEA 79 (196)
T ss_dssp EEEEEEEEECBTTBSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ECTTCCH-HHHHHH
T ss_pred cEEEEEEEEECCCCCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCE---ECCCCCH-HHHHHH
Confidence 455667766 58999998764 359999999999999999999999999998753 3322211 233445
Q ss_pred hhcccCceEEEEeecC
Q 026827 154 IRQRVGPLLMKMQKRY 169 (232)
Q Consensus 154 Ir~RsGpv~LkLeR~~ 169 (232)
++.--.++.|.+.|.-
T Consensus 80 ~~~~g~~v~l~v~r~~ 95 (196)
T 3gsl_A 80 LKEAGSIVRLYVMRRK 95 (196)
T ss_dssp HHTSCSEEEEEEEEEC
T ss_pred HHhCCCcEEEEEEecC
Confidence 5544566777777643
No 115
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.15 E-value=8.7e-06 Score=59.59 Aligned_cols=79 Identities=19% Similarity=0.327 Sum_probs=57.6
Q ss_pred cEEEEEecC----cceeEEeeeCC--CCeEEEEeCCCCCcccccc-cccCcEEEEeecccCCceeeccchhhHHHHhhcc
Q 026827 85 EEYEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADKTGM-FQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (232)
Q Consensus 85 eeyeVeL~K----PLGL~Fee~~d--GgvyV~eV~pGGNAaKaG~-I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R 157 (232)
....|+|.| ++|+.+.-+.+ .+++|..|.+++.|+++|. |++||+|+++-.. .+-.. ..-++...|+..
T Consensus 17 ~~~~v~l~~~~~~~~G~~~~gg~~~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~---~v~~~-~~~~~~~~i~~~ 92 (107)
T 3nfk_A 17 NLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGR---DIAEH-THDQVVLFIKAS 92 (107)
T ss_dssp CCEEEEECCCTTSCCCEEEEEEGGGTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTE---ECTTC-CHHHHHHHHHCG
T ss_pred CEEEEEEEcCCCCCCCEEEEccCCCCCCeEEEEECCCCchHHcCCccCCCCEEEEECCE---ECCCC-CHHHHHHHHHhc
Confidence 346777765 78888876544 3799999999999999995 9999999998743 22211 234566677654
Q ss_pred c----CceEEEEee
Q 026827 158 V----GPLLMKMQK 167 (232)
Q Consensus 158 s----Gpv~LkLeR 167 (232)
. ++|.|++.|
T Consensus 93 ~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 93 CERHSGELMLLVRP 106 (107)
T ss_dssp GGSBTTBEEEEEEC
T ss_pred cccCCcEEEEEEEc
Confidence 4 389999887
No 116
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.13 E-value=1.7e-05 Score=56.18 Aligned_cols=77 Identities=16% Similarity=0.296 Sum_probs=53.1
Q ss_pred cEEEEEecC---cceeEEeeeCC-CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc-c-c
Q 026827 85 EEYEVEIEQ---PYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-R-V 158 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~d-GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~-R-s 158 (232)
+.++|+|.| .+|+.+....+ ++++|..+ +++.|+ +| |++||+|+++-.. .+-.. .+.++...|+. + .
T Consensus 3 ~~~~v~l~k~~~g~G~~~~~~~~~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~---~v~~~-~~~~~~~~l~~~~~g 75 (88)
T 3bpu_A 3 ELITVHIVKGPMGFGFTIADSPGGGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKK---NVQAL-THNQVVDMLVESPKG 75 (88)
T ss_dssp EEEEEEEECBTTBSSCEEEECTTSSSEEEEEC-CC--CC-TT-CCTTCEEEEETTE---ECTTS-CHHHHHHHHHTSCTT
T ss_pred cEEEEEEEcCCCceeEEEEecCCCCcEEEEEe-cCChhH-hC-CCCCCEEEEECCE---EcCCC-CHHHHHHHHHhCCCC
Confidence 457788866 57888887644 58999887 898888 77 9999999998753 22111 23566677773 3 3
Q ss_pred CceEEEEeec
Q 026827 159 GPLLMKMQKR 168 (232)
Q Consensus 159 Gpv~LkLeR~ 168 (232)
.++.|.+.|.
T Consensus 76 ~~v~l~v~R~ 85 (88)
T 3bpu_A 76 SEVTLLVQRQ 85 (88)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEeC
Confidence 5788988873
No 117
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.12 E-value=8.9e-06 Score=58.47 Aligned_cols=73 Identities=22% Similarity=0.358 Sum_probs=54.8
Q ss_pred CcceeEEeee--CCC--CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeec
Q 026827 93 QPYGLKFAKG--RDG--GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (232)
Q Consensus 93 KPLGL~Fee~--~dG--gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~ 168 (232)
.++|+.+... .++ +++|..|.+++.|+++| |++||+|+++... .+-. ..+.++..+|+....++.|.+.|.
T Consensus 14 ~~~G~~l~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~---~v~~-~~~~~~~~~l~~~g~~v~l~v~r~ 88 (96)
T 2v90_A 14 QGFGFLLREEKGLDGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGE---SVEG-LGHEETVSRIQGQGSCVSLTVVDP 88 (96)
T ss_dssp TBSCEEEEEEECTTSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTE---ECTT-CCHHHHHHHHHTTTTEEEEEEECC
T ss_pred CcccEEEEeccCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCE---ECCC-CCHHHHHHHHHcCCCEEEEEEECC
Confidence 4688888763 222 89999999999999999 9999999998753 2211 125667778876556889999985
Q ss_pred CC
Q 026827 169 YG 170 (232)
Q Consensus 169 ~~ 170 (232)
-.
T Consensus 89 ~~ 90 (96)
T 2v90_A 89 EA 90 (96)
T ss_dssp CT
T ss_pred CC
Confidence 43
No 118
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.12 E-value=5.6e-06 Score=58.74 Aligned_cols=69 Identities=16% Similarity=0.331 Sum_probs=50.3
Q ss_pred cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc--ccCceEEEEeec
Q 026827 94 PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ--RVGPLLMKMQKR 168 (232)
Q Consensus 94 PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~--RsGpv~LkLeR~ 168 (232)
.+|+.+... +.+++|..|.+++.|+++| |++||+|+++-.. .+. ...+.++..+|+. ...++.|.+.|.
T Consensus 18 ~lG~~~~~~-~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~---~v~-~~~~~~~~~~l~~~~~g~~v~l~v~R~ 88 (90)
T 2eaq_A 18 DFGFTIKWD-IPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNT---KFS-YNDSKEWEEAMAKAQETGHLVMDVRRY 88 (90)
T ss_dssp CCSEEEEEE-TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTE---ECC-TTCHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred cccEEEEec-CCCEEEEEECCCChHHHcC-CCCCCEEEEECCE---Ecc-CCCHHHHHHHHHhcCCCCEEEEEEEeC
Confidence 488888754 4689999999999999999 9999999998643 331 0234455555653 246788888873
No 119
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.12 E-value=7.9e-06 Score=58.94 Aligned_cols=74 Identities=18% Similarity=0.416 Sum_probs=54.5
Q ss_pred EEEEecC---cceeEEeeeC-CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccc--hhhHHHHhhcccCc
Q 026827 87 YEVEIEQ---PYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRTMYTIRQRVGP 160 (232)
Q Consensus 87 yeVeL~K---PLGL~Fee~~-dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~--~G~t~~AIr~RsGp 160 (232)
..|+|.| .+|+.+.... .++++|..|.+++.|+++| |++||+|+++... +... +.++..+|+...+.
T Consensus 11 ~~~~l~~~~~g~G~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~------~v~~~~~~~~~~~l~~~~~~ 83 (98)
T 2jxo_A 11 RLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGV------CMEGKQHGDVVSAIRAGGDE 83 (98)
T ss_dssp EEEEEECTTTCCCEEEECCCSSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTE------ECTTCCHHHHHHHHHTTTTE
T ss_pred EEEEEEeCCCcccEEEEecCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE------ECCCCCHHHHHHHHHhCCCc
Confidence 3445554 4788887654 3599999999999999999 9999999998753 2333 66777788866554
Q ss_pred e-EEEEee
Q 026827 161 L-LMKMQK 167 (232)
Q Consensus 161 v-~LkLeR 167 (232)
+ .|.+.|
T Consensus 84 ~~~l~v~R 91 (98)
T 2jxo_A 84 TKLLVVDR 91 (98)
T ss_dssp EEEEECCH
T ss_pred EEEEEEEC
Confidence 4 477766
No 120
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.11 E-value=4.6e-06 Score=60.96 Aligned_cols=71 Identities=25% Similarity=0.384 Sum_probs=53.1
Q ss_pred CcceeEEeeeCC-CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeec
Q 026827 93 QPYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (232)
Q Consensus 93 KPLGL~Fee~~d-GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~ 168 (232)
.++|+.+.-..+ .+++|..|.+++.|+++| |++||+|+++... .+-.. ...++..+|+....++.|.+.|.
T Consensus 13 ~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~---~v~~~-~~~~~~~~l~~~g~~v~l~v~r~ 84 (106)
T 3ngh_A 13 QNYGFFLRIEKDTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGV---FVDKE-EHAQVVELVRKSGNSVTLLVLDG 84 (106)
T ss_dssp CCCCCEEECCTTCCSCEEECCCTTSHHHHTT-CCTTCEEEEETTE---ECTTS-CHHHHHHHHHHTTTEEEEEEECH
T ss_pred CeeCEEEEEEeCCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHhCCCEEEEEEEEC
Confidence 367888876544 489999999999999999 9999999998742 22211 23366677775556889998873
No 121
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.10 E-value=1.2e-05 Score=60.78 Aligned_cols=72 Identities=17% Similarity=0.203 Sum_probs=54.7
Q ss_pred cceeEEeeeCCC--CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeecC
Q 026827 94 PYGLKFAKGRDG--GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRY 169 (232)
Q Consensus 94 PLGL~Fee~~dG--gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~~ 169 (232)
.+|+.+..+.+. +++|..|.+++.|+++|.|++||+|+++... .+ ....+.++...|+...+.+.|.+.+..
T Consensus 37 ~lG~~l~~~~~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~---~v-~~~~~~~~~~~l~~~~~~v~l~v~~~~ 110 (114)
T 2gzv_A 37 LIGISIGGGAQYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGR---SI-KGKTKVEVAKMIQEVKGEVTIHYNKLQ 110 (114)
T ss_dssp CCSEEEEECCC--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---EC-TTCCHHHHHHHHHHCCSEEEEEEECCC
T ss_pred cEeEEEEeCCCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCE---EC-CCCCHHHHHHHHHcCCCeEEEEEEecc
Confidence 389999876543 7999999999999999999999999998742 22 113456677778765677888887643
No 122
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.10 E-value=3.5e-06 Score=60.25 Aligned_cols=77 Identities=18% Similarity=0.356 Sum_probs=56.3
Q ss_pred EEEEecC---cceeEEeeeC-CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceE
Q 026827 87 YEVEIEQ---PYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (232)
Q Consensus 87 yeVeL~K---PLGL~Fee~~-dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~ 162 (232)
..|+|.| .+|+.+.... ..+++|..|.+++.|+++| |++||+|+++... .+ ....+.++..+|+....++.
T Consensus 5 r~v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~---~v-~~~~~~~~~~~l~~~g~~v~ 79 (91)
T 2vsp_A 5 KLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGV---NV-LDEPYEKVVDRIQSSGKNVT 79 (91)
T ss_dssp EEEEEECBTTBTSCCCBCCTTCSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTE---EC-TTSCHHHHHHHHTTSCSEEE
T ss_pred EEEEEEeCCCcccEEEEeccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCE---EC-CCCCHHHHHHHHHcCCCEEE
Confidence 4566665 4788886643 3589999999999999999 9999999998742 22 11156677788876666889
Q ss_pred EEEeec
Q 026827 163 MKMQKR 168 (232)
Q Consensus 163 LkLeR~ 168 (232)
|.+.|.
T Consensus 80 l~v~r~ 85 (91)
T 2vsp_A 80 LLVCGK 85 (91)
T ss_dssp EEEEC-
T ss_pred EEEEeC
Confidence 999884
No 123
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.10 E-value=3.9e-06 Score=60.50 Aligned_cols=77 Identities=21% Similarity=0.424 Sum_probs=57.4
Q ss_pred EEEEe--cCcceeEEeeeCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceE
Q 026827 87 YEVEI--EQPYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (232)
Q Consensus 87 yeVeL--~KPLGL~Fee~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~ 162 (232)
+.|++ ..++|+.+..+.+ .+++|..|.+++.|+++| |++||+|+++-.. .+-.. .+.++..+|+....++.
T Consensus 8 ~~~~~~~~~~lG~~l~~g~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~---~v~~~-~~~~~~~~l~~~~~~v~ 82 (94)
T 1vb7_A 8 LTVDVAGPAPWGFRISGGRDFHTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQ---SAENM-LHAEAQSKIRQSASPLR 82 (94)
T ss_dssp EEEEECSSSCCSBCCEEETTTTEEEECCCBCTTSSHHHHT-CCTTCEEEEETTE---ECTTC-CHHHHHHHHHTCCSSEE
T ss_pred EEEEecCCCCccEEEecccCCCCCeEEEEECCCCHHHHCC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHhCCCcEE
Confidence 44554 4568888877644 389999999999999999 9999999998642 22111 22567777876558899
Q ss_pred EEEeec
Q 026827 163 MKMQKR 168 (232)
Q Consensus 163 LkLeR~ 168 (232)
|.+.|.
T Consensus 83 l~v~R~ 88 (94)
T 1vb7_A 83 LQLDRS 88 (94)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 999984
No 124
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.09 E-value=1.5e-05 Score=59.47 Aligned_cols=77 Identities=23% Similarity=0.347 Sum_probs=56.9
Q ss_pred EEEEec----CcceeEEeee-CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCce
Q 026827 87 YEVEIE----QPYGLKFAKG-RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (232)
Q Consensus 87 yeVeL~----KPLGL~Fee~-~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv 161 (232)
|.+.|. +.+|+.+.-. ...+++|..|.+++.|+++| |++||+|+++... .+-. ..+.++...|+..-.++
T Consensus 15 ~~~~l~~~~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~---~v~~-~~~~~~~~~l~~~g~~v 89 (114)
T 2edz_A 15 RECKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGV---FVDK-EEHAQVVELVRKSGNSV 89 (114)
T ss_dssp EEEEEECCTTCCCSCEEECCTTCCSCEEECCCTTCTTGGGT-CCTTCEEEEESSS---BCSS-SCHHHHHHHHHHTCSEE
T ss_pred EEEEEeCCCCCcccEEEEEecCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCE---ECCC-CCHHHHHHHHHcCCCEE
Confidence 555553 4678877754 34589999999999999999 9999999998743 3332 23456677777545688
Q ss_pred EEEEeec
Q 026827 162 LMKMQKR 168 (232)
Q Consensus 162 ~LkLeR~ 168 (232)
.|.+.|.
T Consensus 90 ~l~v~R~ 96 (114)
T 2edz_A 90 TLLVLDG 96 (114)
T ss_dssp EEEEECH
T ss_pred EEEEEEC
Confidence 9999883
No 125
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.08 E-value=2.1e-05 Score=57.58 Aligned_cols=79 Identities=11% Similarity=0.158 Sum_probs=57.0
Q ss_pred cccEEEEEecC---cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc--
Q 026827 83 KYEEYEVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR-- 157 (232)
Q Consensus 83 ~~eeyeVeL~K---PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R-- 157 (232)
..+.+.|+|.| .+|+.+....+ +++|..|.++ |+++| |++||+|+.+... .+-.. .+.++...|+..
T Consensus 8 ~~~~~~v~l~~~~~g~G~~i~~~~~-Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~---~v~~~-~~~~~~~~l~~~~~ 79 (96)
T 1ujv_A 8 QAELMTLTIVKGAQGFGFTIADSPT-GQRVKQILDI--QGCPG-LCEGDLIVEINQQ---NVQNL-SHTEVVDILKDCPI 79 (96)
T ss_dssp CCCCEEEEEECCSSSSSEEEEEETT-EEEEEEESCG--GGSTT-CCSSCEEEEETTE---ECSSC-CHHHHHHHHHHSCT
T ss_pred CceEEEEEEEeCCCceeEEEEcCCC-CEEEEEEecc--cccCC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHcCCC
Confidence 34668888876 47888865443 6999999994 77888 9999999998742 23211 345677888863
Q ss_pred cCceEEEEeecC
Q 026827 158 VGPLLMKMQKRY 169 (232)
Q Consensus 158 sGpv~LkLeR~~ 169 (232)
-.++.|.+.|.-
T Consensus 80 g~~v~l~v~R~g 91 (96)
T 1ujv_A 80 GSETSLIIHRGS 91 (96)
T ss_dssp TSEEEEEEECCS
T ss_pred CCEEEEEEEECC
Confidence 468899998853
No 126
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.08 E-value=1.2e-05 Score=61.72 Aligned_cols=86 Identities=17% Similarity=0.217 Sum_probs=63.4
Q ss_pred hhhccccEEEEEecC------cceeEEeee-CC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhh
Q 026827 79 EQEEKYEEYEVEIEQ------PYGLKFAKG-RD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR 149 (232)
Q Consensus 79 ~~~~~~eeyeVeL~K------PLGL~Fee~-~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~ 149 (232)
.+-.+.+.++|.|.| ++|+.+... .+ .+++|..|.+++.|+++| |++||+|+++-.. .+-.. .+.+
T Consensus 9 ~e~~~~~~~~v~l~k~~~~~~~~G~~v~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~---~v~~~-~~~~ 83 (114)
T 2d8i_A 9 IEICPKVTQSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNR---AADAL-NSSM 83 (114)
T ss_dssp CCSSCCEEEEEEEECSCTTTCCCCCEEEEEEETTEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSC---BGGGC-CHHH
T ss_pred eEeccCceEEEEEEeCCCCccccCEEEEecCcCCcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCE---ECCCc-CHHH
Confidence 344566778888875 488888753 23 389999999999999999 9999999998743 33222 2345
Q ss_pred HHHHhhcccCceEEEEeecCCc
Q 026827 150 TMYTIRQRVGPLLMKMQKRYGK 171 (232)
Q Consensus 150 t~~AIr~RsGpv~LkLeR~~~~ 171 (232)
+..+|+.. ++.|.+.|.+.+
T Consensus 84 ~~~~l~~~--~v~l~v~R~p~~ 103 (114)
T 2d8i_A 84 LKDFLSQP--SLGLLVRTYPEL 103 (114)
T ss_dssp HHHHHTSS--EEEEEEEECCCS
T ss_pred HHHHHhCC--cEEEEEEECCCC
Confidence 66677653 899999997654
No 127
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.08 E-value=1.6e-05 Score=60.31 Aligned_cols=79 Identities=19% Similarity=0.408 Sum_probs=56.8
Q ss_pred EEEEec--CcceeEEeeeCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceE
Q 026827 87 YEVEIE--QPYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (232)
Q Consensus 87 yeVeL~--KPLGL~Fee~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~ 162 (232)
+.|++. .++|+.+....+ .+++|..|.+++.|+++| |++||+|+++... .+-.... -.++..++. ..++.
T Consensus 24 v~v~~~~~~~lG~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~---~v~~~~~-~~~~~~~~~-~~~v~ 97 (128)
T 1uf1_A 24 VNLVLGDGRSLGLTIRGGAEYGLGIYITGVDPGSEAEGSG-LKVGDQILEVNGR---SFLNILH-DEAVRLLKS-SRHLI 97 (128)
T ss_dssp EEEECCSSCCCCEEEECCTTTTCCCEEEEECTTCHHHHHT-CCTTCEEEEETTE---ECSSCCH-HHHHHHHTT-CSEEE
T ss_pred EEEEECCCCccCEEEECcccCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCE---ECCCCCH-HHHHHHHhc-CCeEE
Confidence 444444 579999887543 389999999999999999 9999999998742 3322222 345666665 46899
Q ss_pred EEEeecCCc
Q 026827 163 MKMQKRYGK 171 (232)
Q Consensus 163 LkLeR~~~~ 171 (232)
|.+.|.-..
T Consensus 98 l~v~R~g~~ 106 (128)
T 1uf1_A 98 LTVKDVGRL 106 (128)
T ss_dssp EEEECCSCC
T ss_pred EEEEECCcc
Confidence 999885433
No 128
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.06 E-value=5.4e-06 Score=60.28 Aligned_cols=78 Identities=21% Similarity=0.430 Sum_probs=55.3
Q ss_pred cEEEEEecC-----cceeEEeeeCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc
Q 026827 85 EEYEVEIEQ-----PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR 157 (232)
Q Consensus 85 eeyeVeL~K-----PLGL~Fee~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R 157 (232)
+..+|.|.| .+|+.+....+ .+++|..|.+++.|+++| |++||+|+++-.. .+-.... -.++..++.
T Consensus 8 ~~~~v~l~~~~~~~~lG~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~---~v~~~~~-~~~~~~~~~- 81 (101)
T 1uez_A 8 EVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDK---SLARVTH-AEAVKALKG- 81 (101)
T ss_dssp CCEEECCCCCCTTTCSSEEEEECTTTTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTE---ECSSCCH-HHHHHHSSS-
T ss_pred ccEEEEEEECCCCCcccEEEeCCCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCcCH-HHHHHhhcC-
Confidence 335566655 68999987653 489999999999999999 9999999998743 2222222 234444443
Q ss_pred cCceEEEEeec
Q 026827 158 VGPLLMKMQKR 168 (232)
Q Consensus 158 sGpv~LkLeR~ 168 (232)
..++.|++.|.
T Consensus 82 ~~~v~l~v~R~ 92 (101)
T 1uez_A 82 SKKLVLSVYSA 92 (101)
T ss_dssp SSSCCEEECCC
T ss_pred CCeEEEEEEEC
Confidence 45788998874
No 129
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.06 E-value=5.4e-06 Score=62.75 Aligned_cols=81 Identities=19% Similarity=0.314 Sum_probs=61.4
Q ss_pred cEEEEEec----CcceeEEeeeCC-CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccc--hhhHHHHhhcc
Q 026827 85 EEYEVEIE----QPYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRTMYTIRQR 157 (232)
Q Consensus 85 eeyeVeL~----KPLGL~Fee~~d-GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~--~G~t~~AIr~R 157 (232)
+.++|+|. ..+|+.+....+ ++++|..|.+++.|+++|.|++||+|+++... +... +.++...|+..
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~~~~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~------~v~~~~~~~~~~~l~~~ 81 (127)
T 1b8q_A 8 NVISVRLFKRKVGGLGFLVKERVSKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDR------PLVDLSYDSALEVLRGI 81 (127)
T ss_dssp CSEEEEEECTTTSCCSCCEEECTTSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTE------ECSSSCHHHHHHHHHSC
T ss_pred ceEEEEEEeCCCCcEeEEEEecCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCE------ECCCCCHHHHHHHHHhC
Confidence 45677774 368888887644 59999999999999999966999999998742 2333 66777788764
Q ss_pred c-CceEEEEeecCCc
Q 026827 158 V-GPLLMKMQKRYGK 171 (232)
Q Consensus 158 s-Gpv~LkLeR~~~~ 171 (232)
. .++.|.+.|.-..
T Consensus 82 ~g~~v~l~v~R~g~~ 96 (127)
T 1b8q_A 82 ASETHVVLILRGPEG 96 (127)
T ss_dssp CSSCEEEEEECCCCS
T ss_pred CCCeEEEEEEeCCce
Confidence 4 5889999885443
No 130
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.06 E-value=7e-06 Score=59.16 Aligned_cols=77 Identities=17% Similarity=0.222 Sum_probs=54.6
Q ss_pred EEEEe--cCcceeEEeeeC--CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceE
Q 026827 87 YEVEI--EQPYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (232)
Q Consensus 87 yeVeL--~KPLGL~Fee~~--dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~ 162 (232)
+.|+| +.|+|+.+..+. +.+++|..|.+++.|+++| |++||+|+++-.. .+-.. .+-++...++..-.++.
T Consensus 10 ~~v~l~~~~~~G~~l~gg~~~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~---~v~~~-~~~~~~~~~~~~g~~v~ 84 (94)
T 2eeg_A 10 HSVTLRGPSPWGFRLVGGRDFSAPLTISRVHAGSKAALAA-LCPGDLIQAINGE---STELM-THLEAQNRIKGCHDHLT 84 (94)
T ss_dssp EEEEECCSSCCSCCEECCTTTTSCCEECCCCSSSHHHHTT-CCTTCEEEEETTE---ETTTC-CHHHHHHHHHTCCSCEE
T ss_pred EEEEEeCCCccCEEEECccCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHcCCCeEE
Confidence 44444 456777776654 3589999999999999999 9999999998743 22111 23455566665445789
Q ss_pred EEEeec
Q 026827 163 MKMQKR 168 (232)
Q Consensus 163 LkLeR~ 168 (232)
|.+.|.
T Consensus 85 l~v~R~ 90 (94)
T 2eeg_A 85 LSVSSG 90 (94)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999874
No 131
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.05 E-value=5.2e-06 Score=60.69 Aligned_cols=80 Identities=14% Similarity=0.305 Sum_probs=58.2
Q ss_pred EEEEecC---cceeEEeeeC-CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceE
Q 026827 87 YEVEIEQ---PYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (232)
Q Consensus 87 yeVeL~K---PLGL~Fee~~-dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~ 162 (232)
..|+|.| ++|+.+.... +.++||..|.+++.|+++| |++||+|+++-.. .+ ....+.++...++....++.
T Consensus 10 r~v~l~k~~~~~G~~l~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~---~v-~~~~~~~~~~~~~~~~~~v~ 84 (106)
T 2eei_A 10 RLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMRAG-VLADDHLIEVNGE---NV-EDASHEEVVEKVKKSGSRVM 84 (106)
T ss_dssp EEEEEECCSSSCSCCEECCSSCCSCEECCCCTTSHHHHHT-CCSSEEEEEETTE---EC-TTCCHHHHHHHHHHHCSEEE
T ss_pred EEEEEEECCCCCCEEEEeccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---EC-CCCCHHHHHHHHHhCCCeEE
Confidence 4566665 6788886543 3599999999999999999 9999999998642 22 11234556667765556789
Q ss_pred EEEeecCCc
Q 026827 163 MKMQKRYGK 171 (232)
Q Consensus 163 LkLeR~~~~ 171 (232)
|.+.|+-..
T Consensus 85 l~v~r~~~~ 93 (106)
T 2eei_A 85 FLLVDKETD 93 (106)
T ss_dssp EEECCTTTS
T ss_pred EEEEcCchh
Confidence 999886554
No 132
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.05 E-value=9.7e-06 Score=65.78 Aligned_cols=78 Identities=26% Similarity=0.445 Sum_probs=59.7
Q ss_pred cEEEEEecC----cceeEEeeeC--CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhccc
Q 026827 85 EEYEVEIEQ----PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV 158 (232)
Q Consensus 85 eeyeVeL~K----PLGL~Fee~~--dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~Rs 158 (232)
+..+|+|.| ++|+.+..+. +.++||..|.+||.|+++| +++||+|+++... .+ ....+.++...|+. .
T Consensus 84 ~~~~v~l~k~~~~~lG~~i~~~~~~~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~---~v-~~~~~~~~~~~l~~-~ 157 (192)
T 3k1r_A 84 KLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVG-LQVGDEIVRINGY---SI-SSCTHEEVINLIRT-E 157 (192)
T ss_dssp SCEEEEEETTSTTCCCEEEEEEGGGTEEEEEEEECTTSHHHHTT-CCTTEEEEEETTE---EC-TTCCHHHHHHHHTS-S
T ss_pred ceEEEEEEeCCCCceeEEEEcccccCCCEEEEEECCCChHHHcC-CCCCCEEEEECCE---EC-CCCCHHHHHHHHcC-C
Confidence 346777765 5888887653 3489999999999999999 9999999998642 22 11125677788888 7
Q ss_pred CceEEEEeec
Q 026827 159 GPLLMKMQKR 168 (232)
Q Consensus 159 Gpv~LkLeR~ 168 (232)
.++.|++.|.
T Consensus 158 ~~v~l~v~r~ 167 (192)
T 3k1r_A 158 KTVSIKVRHI 167 (192)
T ss_dssp SEEEEEEEEC
T ss_pred CeEEEEEEEC
Confidence 8899999884
No 133
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.04 E-value=1.4e-05 Score=57.27 Aligned_cols=76 Identities=18% Similarity=0.284 Sum_probs=53.9
Q ss_pred EEEecCc---ceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEE
Q 026827 88 EVEIEQP---YGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMK 164 (232)
Q Consensus 88 eVeL~KP---LGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~Lk 164 (232)
.|+|.|. +|+.+.. +.+++|..|.+++.|+++| |++||+|+++... .+-. ..+.++...|+...+.+.|.
T Consensus 6 ~v~l~~~~~g~G~~l~~--~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~---~v~~-~~~~~~~~~l~~~~~~v~l~ 78 (91)
T 2f5y_A 6 QITIPRGKDGFGFTICC--DSPVRVQAVDSGGPAERAG-LQQLDTVLQLNER---PVEH-WKCVELAHEIRSCPSEIILL 78 (91)
T ss_dssp EEEEECBTTBTSEEEEC--SSSCEEEEECTTSHHHHHT-CCTTCEEEEETTE---ECTT-CCHHHHHHHHHTCSSEEEEE
T ss_pred EEEEEeCCCCccEEEec--CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCC-CCHHHHHHHHHcCCCeEEEE
Confidence 4555544 6666643 4579999999999999999 9999999998753 2211 13445667777655678999
Q ss_pred EeecCC
Q 026827 165 MQKRYG 170 (232)
Q Consensus 165 LeR~~~ 170 (232)
+.|...
T Consensus 79 v~R~~~ 84 (91)
T 2f5y_A 79 VWRMVP 84 (91)
T ss_dssp EEECC-
T ss_pred EEeCCC
Confidence 988644
No 134
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.04 E-value=2e-05 Score=57.67 Aligned_cols=79 Identities=25% Similarity=0.420 Sum_probs=58.2
Q ss_pred EEEEecC---cceeEEeeeCC---------C-----CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhh
Q 026827 87 YEVEIEQ---PYGLKFAKGRD---------G-----GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR 149 (232)
Q Consensus 87 yeVeL~K---PLGL~Fee~~d---------G-----gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~ 149 (232)
..|+|.| ++|+.+..+.+ | .+||..|.+++.|+++| |++||+|+++... .+ ....+.+
T Consensus 8 r~v~l~k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~---~v-~~~~~~~ 82 (107)
T 3qe1_A 8 RVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGV---NV-EGATHKQ 82 (107)
T ss_dssp EEEEEECBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTE---EC-TTCCHHH
T ss_pred EEEEEEECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCE---EC-CCCCHHH
Confidence 5677766 48888876522 2 24799999999999999 9999999998642 22 1124556
Q ss_pred HHHHhhcccCceEEEEeecCC
Q 026827 150 TMYTIRQRVGPLLMKMQKRYG 170 (232)
Q Consensus 150 t~~AIr~RsGpv~LkLeR~~~ 170 (232)
+..+|+.....+.|.+.|...
T Consensus 83 ~~~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 83 VVDLIRAGEKELILTVLSVES 103 (107)
T ss_dssp HHHHHHHCSSEEEEEEECSSC
T ss_pred HHHHHHcCCCEEEEEEEcCCC
Confidence 777888656788999998654
No 135
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.04 E-value=1.9e-05 Score=58.49 Aligned_cols=71 Identities=15% Similarity=0.405 Sum_probs=52.8
Q ss_pred cCcceeEEeeeC--CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeec
Q 026827 92 EQPYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (232)
Q Consensus 92 ~KPLGL~Fee~~--dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~ 168 (232)
..+||+.+.... +.+++|..|.+++.|+++| |++||+|+++... .+-... +-++...++.. .++.|.+.|.
T Consensus 26 ~~~lG~~l~~~~~~~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~---~v~~~~-~~~~~~~~~~~-~~v~l~v~r~ 98 (114)
T 1x5n_A 26 SRGLGCSISSGPIQKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGV---DFSNLD-HKEAVNVLKSS-RSLTISIVAA 98 (114)
T ss_dssp SCCCCEEEEECCSSSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTE---ETTSCC-TTHHHHHHHHC-SSEEEEECSS
T ss_pred CCceeEEEeecCCCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCCCC-HHHHHHHHhcC-CeEEEEEEcC
Confidence 456889998653 3489999999999999999 9999999998753 222221 23455666653 6899999875
No 136
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.02 E-value=2.2e-05 Score=58.83 Aligned_cols=78 Identities=19% Similarity=0.371 Sum_probs=55.5
Q ss_pred EEEEecC--cceeEEeeeCC----CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc---
Q 026827 87 YEVEIEQ--PYGLKFAKGRD----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR--- 157 (232)
Q Consensus 87 yeVeL~K--PLGL~Fee~~d----GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R--- 157 (232)
..|+|.| .+|+.+.-+.+ .++||..|.+++.|+++|.|++||+|+++-.. .+-. ..+.++...|+..
T Consensus 17 ~~v~l~k~~glG~~i~gg~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~---~~~~-~~~~~~~~~l~~~~~r 92 (109)
T 1wi4_A 17 RVITVTKETGLGLKILGGINRNEGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKE---SMIG-VSFEEAKSIITRAKLR 92 (109)
T ss_dssp EEEEECCSSCCCEEEEECSSSSSCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTS---CCTT-CCHHHHHHHHHHSCCS
T ss_pred EEEEEeCCCccCEEEEeccCCCCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHccccC
Confidence 3455544 67777775422 27999999999999999999999999998753 2221 1355677777743
Q ss_pred -cCceEEEEeec
Q 026827 158 -VGPLLMKMQKR 168 (232)
Q Consensus 158 -sGpv~LkLeR~ 168 (232)
..++.|.+.|.
T Consensus 93 ~~~~~~l~v~R~ 104 (109)
T 1wi4_A 93 SESPWEIAFIRS 104 (109)
T ss_dssp SSSCEEEEEECC
T ss_pred CCceEEEEEEeC
Confidence 35778888873
No 137
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.02 E-value=6.6e-06 Score=60.28 Aligned_cols=71 Identities=23% Similarity=0.293 Sum_probs=53.6
Q ss_pred EEEEecC----cceeEEeee---------CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeecc--chhhHH
Q 026827 87 YEVEIEQ----PYGLKFAKG---------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAA--EYGRTM 151 (232)
Q Consensus 87 yeVeL~K----PLGL~Fee~---------~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~--~~G~t~ 151 (232)
.+|.|.| ++|+.+... .+.+++|..|.+++.|+++| |++||+|+++-.. +.. .+.++.
T Consensus 17 ~~v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~------~v~~~~~~~~~ 89 (104)
T 2z17_A 17 KLVTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGV------STEGFTYKQVV 89 (104)
T ss_dssp CEEEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTE------ECTTCCHHHHH
T ss_pred eEEEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCE------EcCCCCHHHHH
Confidence 4555665 588988862 23599999999999999999 9999999998642 233 556777
Q ss_pred HHhhcccCceEEE
Q 026827 152 YTIRQRVGPLLMK 164 (232)
Q Consensus 152 ~AIr~RsGpv~Lk 164 (232)
..|+...+++.|.
T Consensus 90 ~~l~~~~~~v~l~ 102 (104)
T 2z17_A 90 DLIRSSGNLLTIE 102 (104)
T ss_dssp HHHHHTTTEEEEE
T ss_pred HHHHhCCCcEEEE
Confidence 8888766666664
No 138
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=97.99 E-value=2.1e-05 Score=61.43 Aligned_cols=81 Identities=26% Similarity=0.443 Sum_probs=59.8
Q ss_pred EEEEEec---CcceeEEeeeC-------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhh
Q 026827 86 EYEVEIE---QPYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155 (232)
Q Consensus 86 eyeVeL~---KPLGL~Fee~~-------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr 155 (232)
.++|++. .++|+.+.... +.++||..|.|++.|+++|.|++||+|+++-.. .+=. ..+.++..+|+
T Consensus 101 ~~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~---~v~~-~~~~~~~~~l~ 176 (196)
T 3gsl_A 101 VMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSV---GLED-VMHEDAVAALK 176 (196)
T ss_dssp EEEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTE---ECSS-CBHHHHHHHHH
T ss_pred cEEEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCC---cCCC-CCHHHHHHHHH
Confidence 3455543 46888887532 348999999999999999999999999998753 2211 12667778888
Q ss_pred cccCceEEEEeecCC
Q 026827 156 QRVGPLLMKMQKRYG 170 (232)
Q Consensus 156 ~RsGpv~LkLeR~~~ 170 (232)
....++.|.+.|.-.
T Consensus 177 ~~~~~v~l~v~R~~~ 191 (196)
T 3gsl_A 177 NTYDVVYLKVAKPSN 191 (196)
T ss_dssp SCCEEEEEEEEEESC
T ss_pred cCCCeEEEEEeCCCC
Confidence 767889999998543
No 139
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.99 E-value=5e-06 Score=60.99 Aligned_cols=73 Identities=22% Similarity=0.310 Sum_probs=57.5
Q ss_pred EecCcceeEEeeeCCC--CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccc--hhhHHHHhhcccCceEEEE
Q 026827 90 EIEQPYGLKFAKGRDG--GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRTMYTIRQRVGPLLMKM 165 (232)
Q Consensus 90 eL~KPLGL~Fee~~dG--gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~--~G~t~~AIr~RsGpv~LkL 165 (232)
.=..++|+.+..+.|. +++|..|.+++.|+++| |++||+|+++... +... +.++..+|+....++.|.+
T Consensus 12 ~~~~~lG~~l~~g~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~------~v~~~~~~~~~~~l~~~g~~v~l~v 84 (103)
T 1v5l_A 12 PGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAAN-LCPGDVILAIDGF------GTESMTHADAQDRIKAASYQLCLKI 84 (103)
T ss_dssp ESSSCCSBCCEEETTTTEEEECSCBCTTSTTGGGT-CCTTCBEEEETTE------ECSSCCHHHHHHHHTTCCSEEECEE
T ss_pred cCCCCcCEEEeccccCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCE------ECCCCCHHHHHHHHHhCCCeEEEEE
Confidence 3445789998877653 79999999999999999 9999999998742 3333 6677788886667889999
Q ss_pred eecC
Q 026827 166 QKRY 169 (232)
Q Consensus 166 eR~~ 169 (232)
.|.-
T Consensus 85 ~R~g 88 (103)
T 1v5l_A 85 DRAE 88 (103)
T ss_dssp CCCT
T ss_pred EECC
Confidence 8853
No 140
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=97.96 E-value=2.5e-05 Score=59.18 Aligned_cols=79 Identities=22% Similarity=0.345 Sum_probs=56.0
Q ss_pred ccccEEEEEecCc------ceeEEeee-CCC--CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHH
Q 026827 82 EKYEEYEVEIEQP------YGLKFAKG-RDG--GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMY 152 (232)
Q Consensus 82 ~~~eeyeVeL~KP------LGL~Fee~-~dG--gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~ 152 (232)
|.++.-.|.|.|+ +|+.+... .+| +++|.+|.+++.|+++| +++||+|+.+... .+ ..-.+.++..
T Consensus 3 ~~~~~~~v~i~k~~~~~~~~Gf~v~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~---~v-~~~~~~~l~~ 77 (94)
T 3kzd_A 3 MGKVTHSIHIEKSDTAADTYGFSLSSVEEDGIRRLYVNSVKETGLASKKG-LKAGDEILEINNR---AA-DALNSSMLKD 77 (94)
T ss_dssp -CCEEEEEEEEC------CCSEEEEEECSSSSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTE---EG-GGCCHHHHHH
T ss_pred cccceeEEEEEeCCCCcCCcCEEEEecCCCCcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCE---EC-CCCCHHHHHH
Confidence 6667777777775 78888873 344 89999999999999999 9999999998742 11 1113456677
Q ss_pred HhhcccCceEEEEee
Q 026827 153 TIRQRVGPLLMKMQK 167 (232)
Q Consensus 153 AIr~RsGpv~LkLeR 167 (232)
+|+++ ++.|.+..
T Consensus 78 ~l~~~--~l~ltV~~ 90 (94)
T 3kzd_A 78 FLSQP--SLGLLVRT 90 (94)
T ss_dssp HHHSS--EEEEEEEE
T ss_pred HHhCC--eEEEEEEe
Confidence 77754 46665544
No 141
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=97.93 E-value=2.6e-05 Score=57.71 Aligned_cols=57 Identities=19% Similarity=0.346 Sum_probs=46.3
Q ss_pred CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeec
Q 026827 104 DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (232)
Q Consensus 104 dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~ 168 (232)
.+|++|..|.+++.|+++| |++||+|+++.. .+..++.+...+|+. ..++.|.+.|.
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing------~~v~~~~~~~~~l~~-~~~v~l~v~R~ 90 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAG-LRPGDVILAIGE------QMVQNAEDVYEAVRT-QSQLAVQIRRG 90 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHT-CCTTCEEEEETT------EECCSHHHHHHHHHH-CSSEEEEEEET
T ss_pred CCCeEEEEeCCCChHHHcC-CCCCCEEEEECC------EECCCHHHHHHHHhC-CCeEEEEEEEC
Confidence 4699999999999999999 999999999864 234456666677765 47899999884
No 142
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.93 E-value=4.3e-05 Score=57.83 Aligned_cols=83 Identities=16% Similarity=0.189 Sum_probs=57.7
Q ss_pred cEEEEEecCcceeEEeeeC---CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc----
Q 026827 85 EEYEVEIEQPYGLKFAKGR---DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR---- 157 (232)
Q Consensus 85 eeyeVeL~KPLGL~Fee~~---dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R---- 157 (232)
..+.+.-...+|+.+.-+. .|.++|..|.++|.|+++|.|++||+|+++... .+-. ..+.++...|+..
T Consensus 20 ~~~~~~~~~glG~~i~gg~~~~~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~---~v~~-~~~~~~~~~l~~~~~~~ 95 (118)
T 1v6b_A 20 RLLRIKKEGSLDLALEGGVDSPVGKVVVSAVYEGGAAERHGGVVKGDEIMAINGK---IVTD-YTLAEAEAALQKAWNQG 95 (118)
T ss_dssp EEEEEESCSCCCCEEEEBTTSSSCSEEEEECCTTSHHHHHCSSCTTCEEEEESSC---BCTT-CBHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCccCEEEEcccCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECCC-CCHHHHHHHHHHhhhcC
Confidence 3344445567888887653 357999999999999999559999999998753 2221 1244555556532
Q ss_pred cCceEEEEeecCCc
Q 026827 158 VGPLLMKMQKRYGK 171 (232)
Q Consensus 158 sGpv~LkLeR~~~~ 171 (232)
..++.|++.|....
T Consensus 96 g~~v~l~v~r~~~~ 109 (118)
T 1v6b_A 96 GDWIDLVVAVCPPK 109 (118)
T ss_dssp CSEEEEEEECCCSC
T ss_pred CCeEEEEEEeCCcc
Confidence 45799999996543
No 143
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.90 E-value=2.6e-05 Score=68.38 Aligned_cols=86 Identities=17% Similarity=0.271 Sum_probs=65.7
Q ss_pred hccccEEEEEecC----cceeEEeeeCC--CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHh
Q 026827 81 EEKYEEYEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (232)
Q Consensus 81 ~~~~eeyeVeL~K----PLGL~Fee~~d--GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AI 154 (232)
....+...|+|.| +||+.+..+.+ .++||..|.+||-|++++.|++||+|++|-.. .|-.. .+.++...|
T Consensus 73 ~~~~~~r~V~L~k~~~~glGf~I~gg~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~---~v~~~-t~~e~v~~l 148 (263)
T 1z87_A 73 ALLLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGE---DLSSA-THDEAVQAL 148 (263)
T ss_dssp TTSCSSEEECCCTTTTCCCCCEEEEETTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSC---BCTTS-CHHHHHHHH
T ss_pred cCCCccEEEEEEeCCCCCEeEEEeeccCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCE---ECCCc-CHHHHHHHH
Confidence 3445678899987 58899987754 48999999999999995449999999998743 33222 345777788
Q ss_pred hcccCceEEEEeecCC
Q 026827 155 RQRVGPLLMKMQKRYG 170 (232)
Q Consensus 155 r~RsGpv~LkLeR~~~ 170 (232)
+.-.+.|.|++.|...
T Consensus 149 ~~~g~~V~L~V~R~~~ 164 (263)
T 1z87_A 149 KKTGKEVVLEVKYMKE 164 (263)
T ss_dssp HHCCSCCCEEEECCSS
T ss_pred hcCCCeEEEEEEeCcc
Confidence 8766789999998644
No 144
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=97.89 E-value=4.3e-05 Score=61.39 Aligned_cols=82 Identities=17% Similarity=0.345 Sum_probs=59.5
Q ss_pred ccEEEEEecC----cceeEEeeeC------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHH
Q 026827 84 YEEYEVEIEQ----PYGLKFAKGR------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYT 153 (232)
Q Consensus 84 ~eeyeVeL~K----PLGL~Fee~~------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~A 153 (232)
.+.++|+|.| .+|+.+..+. +.+++|..|.|++-|+++|.|++||+|+++-.. .+-. ..+.++...
T Consensus 5 ~~~~~v~l~~~~~~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~---~v~~-~~~~~~~~~ 80 (196)
T 1p1d_A 5 TETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGI---PTED-STFEEANQL 80 (196)
T ss_dssp CEEEEEEEECBTTTBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTB---CSTT-SCHHHHHHH
T ss_pred cEEEEEEEEeCCCCccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCE---ECCC-CCHHHHHHH
Confidence 3567888866 4889999863 347999999999999999999999999997642 2211 134456667
Q ss_pred hhcc--cCceEEEEeecC
Q 026827 154 IRQR--VGPLLMKMQKRY 169 (232)
Q Consensus 154 Ir~R--sGpv~LkLeR~~ 169 (232)
|+.. -.++.|++.|.-
T Consensus 81 l~~~~~g~~v~l~v~R~~ 98 (196)
T 1p1d_A 81 LRDSSITSKVTLEIEFDV 98 (196)
T ss_dssp HHTCCSSSEEEEEEEECS
T ss_pred HHhCCCCCeEEEEEEecC
Confidence 7654 346788887643
No 145
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=97.86 E-value=5.1e-05 Score=60.80 Aligned_cols=78 Identities=21% Similarity=0.380 Sum_probs=61.1
Q ss_pred cEEEEEecC---cceeEEeeeC------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeecc--chhhHHHH
Q 026827 85 EEYEVEIEQ---PYGLKFAKGR------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAA--EYGRTMYT 153 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~--~~G~t~~A 153 (232)
..+.|++.| ++|+.+..+. ..+++|..|.+++.|+++|.|++||+|+++-. .+.. .+.++..+
T Consensus 106 ~~~~v~l~~~~~~lG~~l~~g~~~~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing------~~v~~~~~~~~~~~ 179 (200)
T 2qt5_A 106 RTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDG------IRLLGTTHAEAMSI 179 (200)
T ss_dssp EEEEEEEECBTTBCSEEEEEECCSSTTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETT------EECTTCCHHHHHHH
T ss_pred eEEEEEEecCCCCeEEEEECCCCCCccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECC------EECCCCCHHHHHHH
Confidence 456677644 5899887653 34899999999999999999999999999864 2344 56677888
Q ss_pred hhcccCceEEEEeec
Q 026827 154 IRQRVGPLLMKMQKR 168 (232)
Q Consensus 154 Ir~RsGpv~LkLeR~ 168 (232)
|+....++.|.+.|.
T Consensus 180 l~~~~~~v~l~v~R~ 194 (200)
T 2qt5_A 180 LKQCGQEATLLIEYD 194 (200)
T ss_dssp HHTTCSEEEEEEEEE
T ss_pred HHcCCCeEEEEEEEC
Confidence 887556889999884
No 146
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.85 E-value=3.4e-05 Score=57.39 Aligned_cols=79 Identities=19% Similarity=0.263 Sum_probs=57.6
Q ss_pred EEEEecC---cceeEEeeeCCC---CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc----
Q 026827 87 YEVEIEQ---PYGLKFAKGRDG---GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ---- 156 (232)
Q Consensus 87 yeVeL~K---PLGL~Fee~~dG---gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~---- 156 (232)
..|+|.| +||+.+.-+.+. .+||..|.+++.|+++|.|++||+|+++-.. .+- ...+.++...|+.
T Consensus 8 ~~v~l~k~~~glG~~i~gg~~~~~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~---~v~-~~~~~~~~~~l~~~~~~ 83 (103)
T 1ufx_A 8 TLVRVKKSAATLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGL---TLR-GKEHREAARIIAEAFKT 83 (103)
T ss_dssp EEEEEECCSSSCCEEEECBTTSSCSSCEEEEECTTSHHHHHCSSCTTCBCCEETTE---ECT-TCBHHHHHHHHHHHHHC
T ss_pred EEEEEEcCCCcCCeEEECCCCCCCCcEEEEEeCCCChHHHCCCCCCCCEEEEECCE---ECC-CCCHHHHHHHHHHhccc
Confidence 5667766 788999876553 4699999999999999999999999998642 221 1235566666664
Q ss_pred -ccCceEEEEeecC
Q 026827 157 -RVGPLLMKMQKRY 169 (232)
Q Consensus 157 -RsGpv~LkLeR~~ 169 (232)
...++.|.+.|..
T Consensus 84 ~~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 84 KDRDYIDFLVTEFN 97 (103)
T ss_dssp SSCSEEEEEECCCC
T ss_pred CCCCeEEEEEEEcc
Confidence 3467888887743
No 147
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=97.85 E-value=4.2e-05 Score=69.62 Aligned_cols=73 Identities=22% Similarity=0.384 Sum_probs=56.5
Q ss_pred ecCcceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc-ccC-ceEEEEeec
Q 026827 91 IEQPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-RVG-PLLMKMQKR 168 (232)
Q Consensus 91 L~KPLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~-RsG-pv~LkLeR~ 168 (232)
-..+||+.+..+.++|++|..|.+||.|+++| |++||+|+++... .+- .....++...|+. ..| ++.|++.|.
T Consensus 17 k~~~lG~~i~gg~~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~---~v~-~~~~~e~~~~l~~~~~g~~v~l~v~r~ 91 (391)
T 3tsz_A 17 KGDSVGLRLAGGNDVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNV---DFT-NIIREEAVLFLLDLPKGEEVTILAQKK 91 (391)
T ss_dssp CCSSCCEEEEEETTTEEEEEEECTTCHHHHTT-CCTTEEEEEETTE---ECT-TCCHHHHHHHHHHSCTTSEEEEEEEEC
T ss_pred cCCceeEEEEecCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECC-CCCHHHHHHHHHhhcCCCeEEEEEeeC
Confidence 33489999988888999999999999999999 9999999998752 221 1135667777775 344 688888764
No 148
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.84 E-value=4.4e-05 Score=58.57 Aligned_cols=70 Identities=11% Similarity=0.194 Sum_probs=52.2
Q ss_pred cceeEEeeeC-----CCCeEEEEeCC--CCCcccccccccCcEEEEeecccCCceeeccch--hhHHHHhhcccCceEEE
Q 026827 94 PYGLKFAKGR-----DGGTYIDAIAP--GGSADKTGMFQVGDKVLATSAVFGTEIWPAAEY--GRTMYTIRQRVGPLLMK 164 (232)
Q Consensus 94 PLGL~Fee~~-----dGgvyV~eV~p--GGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~--G~t~~AIr~RsGpv~Lk 164 (232)
++|+.|.-.. ..+++|..|.+ ++.|+++| |++||+|+++... ++..+ .++..+|+....++.|.
T Consensus 28 ~~G~~v~l~~~~~~~~~gv~V~~V~~~~~spA~~aG-L~~GD~Il~Vng~------~v~~~~~~dl~~~l~~~g~~v~l~ 100 (118)
T 2yub_A 28 RRGFSVTVESASSNYATTVQVKEVNRMHISPNNRNA-IHPGDRILEINGT------PVRTLRVEEVEDAIKQTSQTLQLL 100 (118)
T ss_dssp SCSSEEEEECTTSSSCCEEEEEECCTTTSCTTHHHH-CCTTCCEEEESSS------BTTTSCHHHHHHHHHCCSSCEEEE
T ss_pred CceEEEEeccccccCCCcEEEEEecCCCCChHHHcC-CCCCCEEEEECCE------ECCCcCHHHHHHHHHhCCCEEEEE
Confidence 4677766432 35899999999 99999999 9999999998742 23334 66677777654578999
Q ss_pred EeecCC
Q 026827 165 MQKRYG 170 (232)
Q Consensus 165 LeR~~~ 170 (232)
+.|.-.
T Consensus 101 v~R~g~ 106 (118)
T 2yub_A 101 IEHDPV 106 (118)
T ss_dssp EEECSS
T ss_pred EEECCE
Confidence 988543
No 149
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=97.83 E-value=7.2e-05 Score=59.36 Aligned_cols=71 Identities=20% Similarity=0.398 Sum_probs=53.5
Q ss_pred CcceeEEeeeC----------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceE
Q 026827 93 QPYGLKFAKGR----------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLL 162 (232)
Q Consensus 93 KPLGL~Fee~~----------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~ 162 (232)
+.||+.+.-+. +.++||..|.+++-|++ | |++||+|+.+-.. .+-.. ..-++..+++...+.|.
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~---~v~~~-~~~~~~~~~~~~~~~v~ 75 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGY---SFINI-EHGQAVSLLKTFQNTVE 75 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTE---ECTTC-CHHHHHHHHHHCCSEEE
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHcCCCeEE
Confidence 45788887654 34999999999999999 7 9999999998632 23222 24466777776667899
Q ss_pred EEEeecC
Q 026827 163 MKMQKRY 169 (232)
Q Consensus 163 LkLeR~~ 169 (232)
|.+.|..
T Consensus 76 l~v~r~~ 82 (195)
T 2qbw_A 76 LIIVREV 82 (195)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 9999954
No 150
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=97.83 E-value=4.2e-05 Score=72.12 Aligned_cols=75 Identities=21% Similarity=0.362 Sum_probs=57.7
Q ss_pred EEEec--CcceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc--ccCceEE
Q 026827 88 EVEIE--QPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ--RVGPLLM 163 (232)
Q Consensus 88 eVeL~--KPLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~--RsGpv~L 163 (232)
.|.+. ++|||.+.-+++.|+||..|.+||-|+++| |++||+|+.|... .|-. ....++...|+. ..++|.|
T Consensus 4 ~V~l~k~~~lG~~i~gg~~~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~---~v~~-~t~~e~~~~L~~~~~g~~v~L 78 (468)
T 3shw_A 4 LVKFRKGDSVGLRLAGGNDVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNV---DFTN-IIREEAVLFLLDLPKGEEVTI 78 (468)
T ss_dssp EEEEECCSSCCEEEEEETTTEEEEEEECSSSHHHHTT-CCTTEEEEEETTE---ECTT-CCHHHHHHHHHHSCTTSEEEE
T ss_pred EEEEecCCccceEEEccCcCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECCC-CCHHHHHHHHHhcCCCCEEEE
Confidence 35555 489999988888899999999999999999 9999999998753 2211 135566777775 3467888
Q ss_pred EEee
Q 026827 164 KMQK 167 (232)
Q Consensus 164 kLeR 167 (232)
++.|
T Consensus 79 ~V~r 82 (468)
T 3shw_A 79 LAQK 82 (468)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8887
No 151
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=97.82 E-value=6.4e-05 Score=57.31 Aligned_cols=76 Identities=14% Similarity=0.179 Sum_probs=53.0
Q ss_pred EEEecC---cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccC-ceEE
Q 026827 88 EVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVG-PLLM 163 (232)
Q Consensus 88 eVeL~K---PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsG-pv~L 163 (232)
.|.|.| ++|+.+ ..+.+++|..|.+++-|+++| |++||+|+++-.. .+- ...+.++...|+...+ ++.|
T Consensus 26 ~v~l~k~~~~~G~~l--~~~~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~---~v~-~~~~~dv~~~i~~~~~~~v~l 98 (109)
T 2vsv_A 26 SIRFTAEEGDLGFTL--RGNAPVQVHFLDPYCSASVAG-AREGDYIVSIQLV---DCK-WLTLSEVMKLLKSFGEDEIEM 98 (109)
T ss_dssp EEEECCGGGCCCEEE--ESSSSCEEEEECTTSHHHHTT-CCTTCEEEEETTE---ECT-TCCHHHHHHHHHTTTTSCEEE
T ss_pred EEEEEeCCCceeEEE--eCCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECC-CCCHHHHHHHHHhCCCCeEEE
Confidence 455544 456555 334579999999999999999 9999999998642 211 1134566677775555 4999
Q ss_pred EEeecCC
Q 026827 164 KMQKRYG 170 (232)
Q Consensus 164 kLeR~~~ 170 (232)
++.|+..
T Consensus 99 ~V~~~~~ 105 (109)
T 2vsv_A 99 KVVSLLD 105 (109)
T ss_dssp EEESCC-
T ss_pred EEEECCC
Confidence 9988764
No 152
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=97.81 E-value=7.9e-05 Score=59.68 Aligned_cols=78 Identities=19% Similarity=0.403 Sum_probs=56.9
Q ss_pred cEEEEEecC----cceeEEeeeC--CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccch--hhHHHHhhc
Q 026827 85 EEYEVEIEQ----PYGLKFAKGR--DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEY--GRTMYTIRQ 156 (232)
Q Consensus 85 eeyeVeL~K----PLGL~Fee~~--dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~--G~t~~AIr~ 156 (232)
..+.|+|.| +||+.+..+. ++++||..|.+++-|+++|.|++||+|+++... .+ .++ -++..+++.
T Consensus 7 ~~~~v~l~~~~~~~lG~~i~~~~~~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~---~v---~~~~~~~~~~~~~~ 80 (200)
T 2qt5_A 7 GSTVVELMKKEGTTLGLTVSGGIDKDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGI---NL---AKFRHDEIISLLKN 80 (200)
T ss_dssp EEEEEEEECCTTCCCCEEEECCTTSSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTE---EC---TTSCHHHHHHHHHT
T ss_pred CCEEEEEEeCCCCCCCEEEecccCCCCCeEEEEECCCChHHhcCCCCCCCEEEEECCE---EC---CCCCHHHHHHHHHh
Confidence 456777754 7999998753 358999999999999999449999999998643 22 233 455566654
Q ss_pred ccCceEEEEeec
Q 026827 157 RVGPLLMKMQKR 168 (232)
Q Consensus 157 RsGpv~LkLeR~ 168 (232)
-..++.|.+.|.
T Consensus 81 ~g~~v~l~v~R~ 92 (200)
T 2qt5_A 81 VGERVVLEVEYE 92 (200)
T ss_dssp CCSEEEEEEEEE
T ss_pred CCCeEEEEEecc
Confidence 445678888774
No 153
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=97.80 E-value=5.5e-05 Score=56.92 Aligned_cols=75 Identities=17% Similarity=0.403 Sum_probs=55.9
Q ss_pred EEEEec---CcceeEEeeeC-CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccc--hhhHHHHhhcccCc
Q 026827 87 YEVEIE---QPYGLKFAKGR-DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRTMYTIRQRVGP 160 (232)
Q Consensus 87 yeVeL~---KPLGL~Fee~~-dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~--~G~t~~AIr~RsGp 160 (232)
..|.|. ..+|+.+.... .++++|..|.+++.|+++| |++||+|+++... +... +.++..+|+...+.
T Consensus 11 r~v~l~~~~~g~G~~l~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~------~v~~~~~~~~~~~l~~~~~~ 83 (128)
T 2kjd_A 11 RLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGV------CMEGKQHGDVVSAIRAGGDE 83 (128)
T ss_dssp EEEEEECCSSSCCEEEEECSSSCSEEEEEECTTSHHHHHT-CCTTCEEEEETTE------ECTTCCHHHHHHHHHTTCSE
T ss_pred EEEEEecCCCcccEEEEecCCCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCE------ECCCCCHHHHHHHHHhCCCC
Confidence 344454 45888887764 3599999999999999999 9999999998742 3334 66777888765554
Q ss_pred -eEEEEeec
Q 026827 161 -LLMKMQKR 168 (232)
Q Consensus 161 -v~LkLeR~ 168 (232)
+.|.+.|.
T Consensus 84 ~~~l~v~R~ 92 (128)
T 2kjd_A 84 TKLLVVDRE 92 (128)
T ss_dssp EEEEEECHH
T ss_pred EEEEEEEeC
Confidence 56888773
No 154
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=97.77 E-value=3.7e-05 Score=55.50 Aligned_cols=71 Identities=13% Similarity=0.179 Sum_probs=51.3
Q ss_pred CcceeEEeeeC----CC-----CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEE
Q 026827 93 QPYGLKFAKGR----DG-----GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLM 163 (232)
Q Consensus 93 KPLGL~Fee~~----dG-----gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~L 163 (232)
+++|+.+.... ++ +++|..|.+++.|+++| |++||+|+++... -.......++..+|+..-.++.|
T Consensus 13 ~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~----~v~~~~~~~~~~~l~~~g~~v~l 87 (99)
T 3khf_A 13 KKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGE----SVLGLVHMDVVELLLKSGNKISL 87 (99)
T ss_dssp CCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTE----ECTTCCHHHHHHHHHHSCSEEEE
T ss_pred CCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCE----ECCCCCHHHHHHHHhcCCCEEEE
Confidence 46777777542 11 56899999999999999 9999999998642 11212455677777755567888
Q ss_pred EEeec
Q 026827 164 KMQKR 168 (232)
Q Consensus 164 kLeR~ 168 (232)
.+.|.
T Consensus 88 ~v~r~ 92 (99)
T 3khf_A 88 RTTAL 92 (99)
T ss_dssp EEECS
T ss_pred EEEEC
Confidence 88873
No 155
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=97.73 E-value=9.5e-05 Score=59.37 Aligned_cols=77 Identities=21% Similarity=0.379 Sum_probs=60.0
Q ss_pred EEEEEecC----cceeEEeeeC----CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccc--hhhHHHHhh
Q 026827 86 EYEVEIEQ----PYGLKFAKGR----DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAE--YGRTMYTIR 155 (232)
Q Consensus 86 eyeVeL~K----PLGL~Fee~~----dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~--~G~t~~AIr 155 (232)
.+.|++++ .||+.|.... ..+++|..|.+++.|+++|.+++||+|+++... +..+ +.++..+|+
T Consensus 108 ~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~------~v~~~~~~~~~~~l~ 181 (196)
T 1p1d_A 108 TFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNI------RLDSCSMEDAVQILQ 181 (196)
T ss_dssp CEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTE------EGGGCCHHHHHHHHH
T ss_pred cEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCE------ECCCCCHHHHHHHHH
Confidence 36777763 5799987642 358999999999999999989999999998642 3333 666777777
Q ss_pred cccCceEEEEeec
Q 026827 156 QRVGPLLMKMQKR 168 (232)
Q Consensus 156 ~RsGpv~LkLeR~ 168 (232)
....++.|.++|.
T Consensus 182 ~~~~~v~l~v~R~ 194 (196)
T 1p1d_A 182 QCEDLVKLKIRKD 194 (196)
T ss_dssp HCTTCEEEEEECC
T ss_pred hCCCEEEEEEEeC
Confidence 6677899999884
No 156
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.70 E-value=9.2e-05 Score=58.15 Aligned_cols=72 Identities=22% Similarity=0.430 Sum_probs=52.6
Q ss_pred EEEEecC----cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhh--HHHHhhcccC-
Q 026827 87 YEVEIEQ----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR--TMYTIRQRVG- 159 (232)
Q Consensus 87 yeVeL~K----PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~--t~~AIr~RsG- 159 (232)
.+|.|.| .||+.+... +.+++|..|.+++.|+++| |++||+|+++... +..++.. ....++...+
T Consensus 6 r~v~l~k~~~~~lG~~~~~~-~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~------~v~~~~~~~~~~~~~~~~~~ 77 (166)
T 1w9e_A 6 REVILCKDQDGKIGLRLKSI-DNGIFVQLVQANSPASLVG-LRFGDQVLQINGE------NCAGWSSDKAHKVLKQAFGE 77 (166)
T ss_dssp EEEEEECCTTSCCSEEEEEE-TTEEEEEEECTTSHHHHTT-CCTTCEEEEETTE------ECTTCCHHHHHHHHHHCCSS
T ss_pred EEEEEEeCCCCcEeEEEEeC-CCCEEEEEECCCChHHHcC-CCCCCEEEEECCE------ECCCCCHHHHHHHHhcCCCC
Confidence 5677776 689999874 5789999999999999999 9999999998742 2223332 3344444444
Q ss_pred ceEEEEe
Q 026827 160 PLLMKMQ 166 (232)
Q Consensus 160 pv~LkLe 166 (232)
++.|++.
T Consensus 78 ~v~l~vr 84 (166)
T 1w9e_A 78 KITMTIR 84 (166)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7788883
No 157
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.69 E-value=0.00011 Score=71.12 Aligned_cols=83 Identities=23% Similarity=0.400 Sum_probs=63.7
Q ss_pred ccEEEEEecC---cceeEEeeeCC-CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccC
Q 026827 84 YEEYEVEIEQ---PYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVG 159 (232)
Q Consensus 84 ~eeyeVeL~K---PLGL~Fee~~d-GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsG 159 (232)
.+...|+|.| +||+.+....+ .++||..|.+||.|+++|.|++||+|+.|... .|-.. .+.++..+|+...+
T Consensus 306 ~~~~~v~l~~~~~~lG~~i~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~---~v~~~-~~~e~~~~l~~~~~ 381 (721)
T 2xkx_A 306 REPRRIVIHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGV---DLRNA-SHEQAAIALKNAGQ 381 (721)
T ss_pred cceEEEEEEECCCCccEEEeccCCCCCeEEEEeCCCChHHhcCCCccCCEEEEECCE---ECCCC-CHHHHHHHHHhcCC
Confidence 3556677765 48888876544 59999999999999999999999999998753 22221 35677788887678
Q ss_pred ceEEEEeecCC
Q 026827 160 PLLMKMQKRYG 170 (232)
Q Consensus 160 pv~LkLeR~~~ 170 (232)
++.|.+.|...
T Consensus 382 ~v~L~v~r~~~ 392 (721)
T 2xkx_A 382 TVTIIAQYKPE 392 (721)
T ss_pred eEEEEEEeCch
Confidence 89999988754
No 158
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.66 E-value=5.1e-05 Score=55.22 Aligned_cols=77 Identities=19% Similarity=0.295 Sum_probs=56.1
Q ss_pred cEEEEEecCc-----ceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccC
Q 026827 85 EEYEVEIEQP-----YGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVG 159 (232)
Q Consensus 85 eeyeVeL~KP-----LGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsG 159 (232)
..++|+|.|. +|+.+.. +.+++|..|.+++.|+ +| |++||+|+++... .+=.. .+-++...++..-.
T Consensus 8 ~~~~v~l~~~~~~~~~G~~l~~--~~~~~V~~V~~~spA~-ag-L~~GD~Il~ing~---~v~~~-~~~~~~~~~~~~g~ 79 (96)
T 2edv_A 8 VRHTVKIDKDTLLQDYGFHISE--SLPLTVVAVTAGGSAH-GK-LFPGDQILQMNNE---PAEDL-SWERAVDILREAED 79 (96)
T ss_dssp EEEEEEECCCSSSCSCSBCCCS--SSSCBCCCBCSSSSST-TT-SCTTCBEEEESSC---BSTTC-CHHHHHHHHHHCSS
T ss_pred ccEEEEEEECCCCCcccEEEec--CCCeEEEEECCCCchh-hC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHcCCC
Confidence 4577888764 5555543 5689999999999995 66 9999999998742 33111 34466677776567
Q ss_pred ceEEEEeecC
Q 026827 160 PLLMKMQKRY 169 (232)
Q Consensus 160 pv~LkLeR~~ 169 (232)
++.|.+.|..
T Consensus 80 ~v~l~v~R~~ 89 (96)
T 2edv_A 80 SLSITVVRCT 89 (96)
T ss_dssp CEEEEEEECC
T ss_pred eEEEEEEECC
Confidence 8999999976
No 159
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.61 E-value=8.3e-05 Score=58.47 Aligned_cols=83 Identities=13% Similarity=0.235 Sum_probs=59.5
Q ss_pred cEEEEEecC---cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc-cc-C
Q 026827 85 EEYEVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-RV-G 159 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~-Rs-G 159 (232)
..++++|.| -||+.+.. .+.+++|..|.++|.|+++|.|++||+|+++-.. .|- -..+.++..+|+. .. .
T Consensus 27 ~~~~~~l~k~~~glG~~i~~-~~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~---~v~-~~s~~d~~~~l~~~~~G~ 101 (126)
T 1wif_A 27 KVIQTKLTVGNLGLGLVVIQ-NGPYLQISHLINKGAAASDGILQPGDVLISVGHA---NVL-GYTLREFLKLLQNITIGT 101 (126)
T ss_dssp CEEEEEEECCTTCCCCCEEE-ETTEEEECCCCTTSSGGGCSSSCTTCBEEEESSS---CCT-TCCHHHHHHHHTSCCSSC
T ss_pred ceEEEEEecCCceEeEEEEc-CCCcEEEEEECCCCHHHHcCCCCCCCEEEEECCE---EcC-CCCHHHHHHHHhcCCCCC
Confidence 346666654 34555554 3568999999999999999999999999998642 221 1245677788886 33 4
Q ss_pred ceEEEEeecCCcc
Q 026827 160 PLLMKMQKRYGKM 172 (232)
Q Consensus 160 pv~LkLeR~~~~~ 172 (232)
+|.|.+.|.|-.+
T Consensus 102 ~v~l~V~R~~~~i 114 (126)
T 1wif_A 102 VLQIKAYRGFLEI 114 (126)
T ss_dssp EEEEEEESSSSCC
T ss_pred EEEEEEEECCCcc
Confidence 7899999985443
No 160
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=97.57 E-value=0.00022 Score=52.47 Aligned_cols=73 Identities=11% Similarity=0.200 Sum_probs=54.1
Q ss_pred EEEEEecC----cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCce
Q 026827 86 EYEVEIEQ----PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL 161 (232)
Q Consensus 86 eyeVeL~K----PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv 161 (232)
...|+|.| ++|+.+. +| +|..|.+++.|+++| +++||+|+.|-.. .+ ......++...||..-+.|
T Consensus 5 ~r~v~l~k~~~g~~Gf~i~---~g--~I~~v~~gspA~~aG-l~~GD~Il~VNG~---~v-~~~~~~evv~llr~~g~~V 74 (82)
T 1r6j_A 5 PRTITMHKDSTGHVGFIFK---NG--KITSIVKDSSAARNG-LLTEHNICEINGQ---NV-IGLKDSQIADILSTSGTVV 74 (82)
T ss_dssp CEEEEEECCTTSCCCEEEE---TT--EEEEECTTSHHHHHT-CCSSEEEEEETTE---EC-TTCCHHHHHHHHHHSCSEE
T ss_pred eEEEEEEECCCCCeEEEEE---CC--EEEEecCCCHHHHcC-CCCCCEEEEECCE---Ec-CCCCHHHHHHHHhcCCCEE
Confidence 36788877 5777764 23 489999999999999 8999999998753 22 2224568888999555678
Q ss_pred EEEEeec
Q 026827 162 LMKMQKR 168 (232)
Q Consensus 162 ~LkLeR~ 168 (232)
+|++...
T Consensus 75 ~L~v~p~ 81 (82)
T 1r6j_A 75 TITIMPA 81 (82)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 8887654
No 161
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=96.68 E-value=1.2e-05 Score=60.91 Aligned_cols=79 Identities=23% Similarity=0.378 Sum_probs=52.2
Q ss_pred ccccEEEEEecC----cceeEEeeeCC--CCeEEEEeCCCCCccc-ccccccCcEEEEeecccCCceeeccchhhHHHHh
Q 026827 82 EKYEEYEVEIEQ----PYGLKFAKGRD--GGTYIDAIAPGGSADK-TGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTI 154 (232)
Q Consensus 82 ~~~eeyeVeL~K----PLGL~Fee~~d--GgvyV~eV~pGGNAaK-aG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AI 154 (232)
+-.+..+|+|.| ++|+.+..+.+ .+++|..|.+++.|++ +| |++||+|+++... .+= ...+.++..+|
T Consensus 24 ~~~~~~~v~l~k~~~~glG~~l~~g~~~~~gv~V~~V~~~spA~~~aG-L~~GD~Il~ING~---~v~-~~~~~~~~~~l 98 (112)
T 2lob_A 24 YFQGIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGG-LHVGDAILAVNGV---NLR-DTKHKEAVTIL 98 (112)
Confidence 333444566655 56777776533 3899999999999999 66 9999999998742 231 11344556666
Q ss_pred hcccCceEEEE
Q 026827 155 RQRVGPLLMKM 165 (232)
Q Consensus 155 r~RsGpv~LkL 165 (232)
+...+.+.|++
T Consensus 99 ~~~~~~v~l~V 109 (112)
T 2lob_A 99 SQQRGEIEFEV 109 (112)
Confidence 65445566554
No 162
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.49 E-value=0.00017 Score=52.69 Aligned_cols=64 Identities=22% Similarity=0.437 Sum_probs=46.6
Q ss_pred cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEee
Q 026827 94 PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQK 167 (232)
Q Consensus 94 PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR 167 (232)
++|+.+. .| +|..|.+++.|+++| |++||+|+++... .+- ...+.++...|+....++.|++.+
T Consensus 25 ~lG~~~~---~G--~V~~V~~~spA~~aG-L~~GD~Il~Ing~---~v~-~~~~~~~~~~l~~~g~~v~l~v~p 88 (90)
T 1y7n_A 25 QLGFSVQ---NG--IICSLMRGGIAERGG-VRVGHRIIEINGQ---SVV-ATPHEKIVHILSNAVGEIHMKTMP 88 (90)
T ss_dssp CCCEEEE---TT--EEEEECTTSHHHHHT-CCSSCEEEEETTE---ECT-TSCHHHHHHHHHHCCEEEEEEEEC
T ss_pred ccCeEec---CC--EEEEECCCCHHHHcC-CCCCCEEEEECCE---ECC-CCCHHHHHHHHHcCCCeEEEEEEE
Confidence 4677663 23 999999999999999 9999999998743 331 124566777787555667777654
No 163
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=97.47 E-value=0.00018 Score=55.91 Aligned_cols=70 Identities=19% Similarity=0.346 Sum_probs=51.3
Q ss_pred cCcceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc---ccCceEEEEee
Q 026827 92 EQPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ---RVGPLLMKMQK 167 (232)
Q Consensus 92 ~KPLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~---RsGpv~LkLeR 167 (232)
....|+.+.. .++++.|.+|.+|+.|+++| |++||+|+++-.. . .....+.++...|+. .-+++.|.+.-
T Consensus 27 ~~g~G~~l~~-~~~~~~I~~V~~gSpA~~AG-L~~GD~I~~Ing~---~-v~~~s~~dv~~~i~~~~~~g~~v~LLV~~ 99 (101)
T 3qik_A 27 EEDYGFDIEE-KNKAVVVKSVQRGSLAEVAG-LQVGRKIYSINED---L-VFLRPFSEVESILNQSFCSRRPLRLLVAT 99 (101)
T ss_dssp SSSSSEEEEE-ETTEEEEEEECTTSHHHHHT-CCTTCBEEEETTE---E-STTSCHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCcccEEEEc-cCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCE---E-cCcCCHHHHHHHHHHhhccCCeEEEEEec
Confidence 4456777776 46689999999999999999 9999999998642 2 222345566666664 56788877653
No 164
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.45 E-value=0.00029 Score=68.13 Aligned_cols=83 Identities=23% Similarity=0.426 Sum_probs=57.6
Q ss_pred ccccEEEEEecC---cceeEEeeeC-------CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHH
Q 026827 82 EKYEEYEVEIEQ---PYGLKFAKGR-------DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTM 151 (232)
Q Consensus 82 ~~~eeyeVeL~K---PLGL~Fee~~-------dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~ 151 (232)
..++.++|+|.| +||+.+.-+. +.++||..|.+||-|+++|.|++||+|++|... .+-.. ...++.
T Consensus 56 ~~~~~~~v~l~k~~~glGf~i~gg~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~---~v~~~-~~~~~~ 131 (721)
T 2xkx_A 56 GEMEYEEITLERGNSGLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEV---DVREV-THSAAV 131 (721)
T ss_pred CCceEEEEEEEeCCCCCCEEEeCCcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCE---ECCCC-CHHHHH
Confidence 345667888875 7888887653 458999999999999999999999999998753 22111 223455
Q ss_pred HHhhcccCceEEEEeec
Q 026827 152 YTIRQRVGPLLMKMQKR 168 (232)
Q Consensus 152 ~AIr~RsGpv~LkLeR~ 168 (232)
.+|+.-...|.|.+.|.
T Consensus 132 ~~l~~~g~~v~l~v~R~ 148 (721)
T 2xkx_A 132 EALKEAGSIVRLYVMRR 148 (721)
T ss_pred HHhhccccccceEEEec
Confidence 55654334566666554
No 165
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.41 E-value=0.00013 Score=55.30 Aligned_cols=72 Identities=17% Similarity=0.201 Sum_probs=52.0
Q ss_pred CcceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccC-ceEEEEeecCCc
Q 026827 93 QPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVG-PLLMKMQKRYGK 171 (232)
Q Consensus 93 KPLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsG-pv~LkLeR~~~~ 171 (232)
.++|+.+. .+.+++|..|.+++.|+++| |++||+|+++-.. .+- ...+.++...|+...+ ++.|++.|+...
T Consensus 26 ~~~G~~l~--~~~~v~V~~V~~~spA~~aG-L~~GD~Il~InG~---~v~-~~~~~d~~~~i~~~~~~~v~l~V~~~~~~ 98 (111)
T 1vae_A 26 GDLGFTLR--GNTPVQVHFLDPHCSASLAG-AKEGDYIVSIQGV---DCK-WLTVSEVMKLLKSFGGEEVEMKVVSLLDS 98 (111)
T ss_dssp SCCSCCEE--SSSSCEECCCCTTSSHHHHH-CCTTCEEEEETTE---ECS-SCCHHHHHHHHHHTTTSEECEEEECEECC
T ss_pred CcccEEEe--CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCE---ECC-CCCHHHHHHHHHhCCCceEEEEEEecCCC
Confidence 45676653 24579999999999999999 9999999998742 221 1155666777775444 589998887544
No 166
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=97.32 E-value=0.00063 Score=50.24 Aligned_cols=57 Identities=21% Similarity=0.496 Sum_probs=44.6
Q ss_pred CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeec
Q 026827 104 DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (232)
Q Consensus 104 dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~ 168 (232)
..|++|..|.+++.|+++| |++||+|+++... +..++.+...+++. ..++.|.+.|.
T Consensus 34 ~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~------~v~~~~~~~~~l~~-g~~v~l~v~R~ 90 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGG-IQDGDIIVKVNGR------PLVDSSELQEAVLT-ESPLLLEVRRG 90 (112)
T ss_dssp CSSEEEEEECTTSHHHHHT-CCTTCEEEEETTE------ECCSHHHHHHHHHH-CSSEEEEEEET
T ss_pred CCCeEEEEECCCChHHHCC-CCCCCEEEEECCE------ECCCHHHHHHHHhC-CCeEEEEEEEC
Confidence 4689999999999999999 9999999998742 33455556666643 45789999884
No 167
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=97.30 E-value=0.00075 Score=52.24 Aligned_cols=57 Identities=7% Similarity=0.109 Sum_probs=43.7
Q ss_pred CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc-c-CceEEEEeec
Q 026827 104 DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR-V-GPLLMKMQKR 168 (232)
Q Consensus 104 dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R-s-Gpv~LkLeR~ 168 (232)
..+++|..|.+++.|+ +| |++||+|+++... +..++.+...+|... . .++.|++.|.
T Consensus 56 ~~g~~V~~V~~~spA~-aG-L~~GD~I~~inG~------~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 114 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GH-LEKYDVITKVDDK------EIASSTDLQSALYNHSIGDTIKITYYRN 114 (134)
T ss_dssp CSCEEEEECSTTSGGG-TT-SCSSCEEEEETTE------ECCCHHHHHHHHHHSSTTCEEEEEEEET
T ss_pred CCCEEEEEECCCCchH-HC-CCCCCEEEEECCE------EcCCHHHHHHHHHhCCCCCEEEEEEEEC
Confidence 4689999999999999 98 9999999998742 334455566666643 3 4689999883
No 168
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.30 E-value=0.00092 Score=54.91 Aligned_cols=79 Identities=10% Similarity=0.109 Sum_probs=55.5
Q ss_pred cceeEEeee-----CCCCeEEEEeCCCCCccccccccc-CcEEEEeecccCCceeeccchhhHHHHhhcc-cCceEEEEe
Q 026827 94 PYGLKFAKG-----RDGGTYIDAIAPGGSADKTGMFQV-GDKVLATSAVFGTEIWPAAEYGRTMYTIRQR-VGPLLMKMQ 166 (232)
Q Consensus 94 PLGL~Fee~-----~dGgvyV~eV~pGGNAaKaG~I~V-GD~LvatSA~FGdElWpA~~~G~t~~AIr~R-sGpv~LkLe 166 (232)
-||+.+..- ...|++|.+|.+++.|+++| +++ ||+|+++. ..+-..+++ ..+|+.. -.++.|.+.
T Consensus 96 ~lGi~~~~~~~~~~~~~Gv~V~~V~~~spA~~aG-l~~~GD~I~~in----g~v~~~~~l---~~~l~~~~g~~v~l~v~ 167 (209)
T 3rle_A 96 LLGVSIRFCSFDGANENVWHVLEVESNSPAALAG-LRPHSDYIIGAD----TVMNESEDL---FSLIETHEAKPLKLYVY 167 (209)
T ss_dssp SSCEEEEEEECTTGGGSCEEEEEECTTSHHHHHT-CCTTTEEEEEES----SCCCSSSCH---HHHHHHTTTSCEEEEEE
T ss_pred ccceEEeecChhHccccceEEEEeCCCChHHHCC-CCCCCCEEEECC----CEeCCHHHH---HHHHHhCCCCeEEEEEE
Confidence 478888742 22689999999999999999 999 99999985 234444444 4455443 457899999
Q ss_pred ecCCccccccccch
Q 026827 167 KRYGKMEQTGELSE 180 (232)
Q Consensus 167 R~~~~~~~~~~lte 180 (232)
|.-++....-.++.
T Consensus 168 r~~~~~~~~v~l~p 181 (209)
T 3rle_A 168 NTDTDNCREVIITP 181 (209)
T ss_dssp ETTTTEEEEEEECC
T ss_pred ECCceEEEEEEEEe
Confidence 97664433344443
No 169
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.30 E-value=0.00015 Score=65.47 Aligned_cols=78 Identities=15% Similarity=0.312 Sum_probs=55.7
Q ss_pred EEEEecC----cceeEEeeeCCC----CeEEEEeCCCCCcccccccccCcEEEEeecccCCce--eeccchhhHHHHhhc
Q 026827 87 YEVEIEQ----PYGLKFAKGRDG----GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEI--WPAAEYGRTMYTIRQ 156 (232)
Q Consensus 87 yeVeL~K----PLGL~Fee~~dG----gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdEl--WpA~~~G~t~~AIr~ 156 (232)
-+|+|.| +||+.+....+| +++|..|.||+-|+++|.|++||+|+++... .+ |.. ..+...|+.
T Consensus 206 ~~V~i~k~~ge~lG~~i~~~~~g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~---~v~~~~~---~~~~~~l~~ 279 (388)
T 3suz_A 206 KELQLEKHKGEILGVVVVESGWGSILPTVILANMMNGGPAARSGKLSIGDQIMSINGT---SLVGLPL---ATCQGIIKG 279 (388)
T ss_dssp EEEEECCCSSCCCCCCCBCC---CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTE---ECSSCCS---TTHHHHTTT
T ss_pred eEEEEECCCCCceeEEEEecCCCCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCE---EccCCCH---HHHHHHHHh
Confidence 3566655 699988876555 7999999999999999999999999998753 33 332 344556664
Q ss_pred c--cCceEEEEeecCC
Q 026827 157 R--VGPLLMKMQKRYG 170 (232)
Q Consensus 157 R--sGpv~LkLeR~~~ 170 (232)
. ..++.|.+.|...
T Consensus 280 ~~~~~~v~l~v~r~~~ 295 (388)
T 3suz_A 280 LKNQTQVKLNIVSCPP 295 (388)
T ss_dssp CTTCSCEEEEEEECCS
T ss_pred ccCCCccccccccccc
Confidence 3 2458998888543
No 170
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=97.23 E-value=0.001 Score=48.67 Aligned_cols=58 Identities=10% Similarity=0.134 Sum_probs=43.4
Q ss_pred CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc--cCceEEEEeec
Q 026827 103 RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR--VGPLLMKMQKR 168 (232)
Q Consensus 103 ~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R--sGpv~LkLeR~ 168 (232)
...|++|..|.+++.|++ | |++||+|+++-.. +...+.+...++... -.++.|.+.|.
T Consensus 5 ~~~Gv~V~~V~~~spA~~-G-L~~GD~I~~Ing~------~v~~~~dl~~~l~~~~~g~~v~l~v~R~ 64 (100)
T 3i18_A 5 TYDGVYVMSVKDDVPAAD-V-LHAGDLITEIDGN------AFKSSQEFIDYIHSKKVGDTVKINYKHG 64 (100)
T ss_dssp CCCCEEEEEECTTSGGGG-T-CCTTCEEEEETTB------CCSSHHHHHHHHHTSCTTCEEEEEEEET
T ss_pred eCCCEEEEEeCCCCchHH-C-CCCCCEEEEECCE------ECCCHHHHHHHHHhCCCCCEEEEEEEEC
Confidence 356999999999999995 7 9999999998642 334455556666642 25788988884
No 171
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.19 E-value=0.00027 Score=59.88 Aligned_cols=76 Identities=17% Similarity=0.412 Sum_probs=53.7
Q ss_pred EEEEecC---cceeEEeeeCC-CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCce-
Q 026827 87 YEVEIEQ---PYGLKFAKGRD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPL- 161 (232)
Q Consensus 87 yeVeL~K---PLGL~Fee~~d-GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv- 161 (232)
..|+|.| .+|+.+..+.+ ++++|..|.+|+.|+++| |++||+|++|-.. .|- ...+.++...|+..-..+
T Consensus 11 r~v~l~k~~~glG~~l~~~~~~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~---~V~-~~s~~dl~~~l~~~g~~v~ 85 (216)
T 2krg_A 11 RLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGV---CME-GKQHGDVVSAIRAGGDETK 85 (216)
T ss_dssp EEEEEECCSSSSCEEECCCSSSCSCBEEEECTTSHHHHHT-CCTTCBCCEETTE---ECT-TCCTHHHHHHHHHHCSEEE
T ss_pred EEEEEEeCCCCceEEEEecCCCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCE---ECC-CCCHHHHHHHHHhcCCeEE
Confidence 4455544 47788876543 399999999999999999 9999999998642 221 115566677777554467
Q ss_pred EEEEee
Q 026827 162 LMKMQK 167 (232)
Q Consensus 162 ~LkLeR 167 (232)
.|.+.|
T Consensus 86 ~l~V~R 91 (216)
T 2krg_A 86 LLVVDR 91 (216)
T ss_dssp EEECCH
T ss_pred EEEEEE
Confidence 777765
No 172
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=97.19 E-value=0.00088 Score=58.06 Aligned_cols=67 Identities=21% Similarity=0.330 Sum_probs=51.2
Q ss_pred ceeEEeee-----------CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc-cc-Cce
Q 026827 95 YGLKFAKG-----------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-RV-GPL 161 (232)
Q Consensus 95 LGL~Fee~-----------~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~-Rs-Gpv 161 (232)
|||.+..- ...+++|..|.+++.|+++| |++||+|+++-.. +...+.+...+|+. +. .++
T Consensus 223 lGi~~~~~~~~~~~~~g~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~------~v~~~~~l~~~l~~~~~g~~v 295 (318)
T 1te0_A 223 IGIGGREIAPLHAQGGGIDQLQGIVVNEVSPDGPAANAG-IQVNDLIISVDNK------PAISALETMDQVAEIRPGSVI 295 (318)
T ss_dssp CCEEEEECSCCCSSSSCSSSCCCEEEEEECTTSTTTTTC-CCTTCCEEEETTE------ECCCHHHHHHHHHTSCTTCEE
T ss_pred ceeEeeecchhHHHhccCCCCCcEEEEEeCCCChHHHCC-CCCCCEEEEECCE------EcCCHHHHHHHHHhcCCCCEE
Confidence 68887652 23589999999999999999 9999999998742 33445566677775 34 478
Q ss_pred EEEEeec
Q 026827 162 LMKMQKR 168 (232)
Q Consensus 162 ~LkLeR~ 168 (232)
.|++.|.
T Consensus 296 ~l~v~R~ 302 (318)
T 1te0_A 296 PVVVMRD 302 (318)
T ss_dssp EEEEESS
T ss_pred EEEEEEC
Confidence 9999884
No 173
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=97.15 E-value=0.00067 Score=49.46 Aligned_cols=57 Identities=16% Similarity=0.328 Sum_probs=44.0
Q ss_pred CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc--cCceEEEEeec
Q 026827 104 DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR--VGPLLMKMQKR 168 (232)
Q Consensus 104 dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R--sGpv~LkLeR~ 168 (232)
..|++|..|.+++.|++ | |++||+|+++... +..++.+...+|+.. ..++.|.+.|.
T Consensus 4 ~~Gv~V~~V~~~spA~~-G-L~~GD~Il~InG~------~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 62 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-R-LEAGDRIAAIDGQ------PINTSEQIVSYVREKQAGDRVRVTFIRD 62 (94)
T ss_dssp CCCEECCCCCTTSTTBT-T-BCTTCEEEEETTB------CCCCHHHHHHHHHHSCTTCCEEEEEEET
T ss_pred CCcEEEEEECCCChHHh-C-CCCCCEEEEECCE------ECCCHHHHHHHHHhCCCCCEEEEEEEEC
Confidence 45799999999999998 8 9999999998742 233455666777653 35789999884
No 174
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.14 E-value=0.0012 Score=57.20 Aligned_cols=70 Identities=19% Similarity=0.292 Sum_probs=52.9
Q ss_pred ceeEEeee-CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc-cc-CceEEEEeecCCc
Q 026827 95 YGLKFAKG-RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-RV-GPLLMKMQKRYGK 171 (232)
Q Consensus 95 LGL~Fee~-~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~-Rs-Gpv~LkLeR~~~~ 171 (232)
|||.+... ...+++|..|.+++.|+++| |++||+|+++-.. ++..+.+....|.. +. .++.|++.|..|+
T Consensus 231 lGi~~~~~~~~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~------~v~~~~~l~~~l~~~~~g~~v~l~v~R~~g~ 303 (324)
T 1y8t_A 231 LGVQVTNDKDTLGAKIVEVVAGGAAANAG-VPKGVVVTKVDDR------PINSADALVAAVRSKAPGATVALTFQDPSGG 303 (324)
T ss_dssp CCEEEESCSSSSSEEEEEECTTSTTTTTT-CCTTCEEEEETTE------ECCSHHHHHHHHHTSCTTCEEEEEEECSSCC
T ss_pred cceEeeeccCCCceEEEEECCCChHHHcC-CCCCCEEEEECCE------ECCCHHHHHHHHHhcCCCCEEEEEEEECCCC
Confidence 78888764 35689999999999999999 9999999998642 33455566666754 33 4689999885454
No 175
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.09 E-value=0.0005 Score=65.97 Aligned_cols=66 Identities=17% Similarity=0.286 Sum_probs=49.4
Q ss_pred cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc-cc-CceEEEEeec
Q 026827 94 PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-RV-GPLLMKMQKR 168 (232)
Q Consensus 94 PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~-Rs-Gpv~LkLeR~ 168 (232)
-+|+.+... +|+++|..|.+++.|+++| |++||+|+++... .+ ..+++ ..+|+. +. .+|.|.+.|.
T Consensus 486 ~lG~~~~~~-~~gv~V~~V~~~spA~~AG-L~~GD~I~aInG~---~v-~~~~l---~~~l~~~~~g~~v~l~v~R~ 553 (597)
T 4fgm_A 486 NFGAKYKAS-PQGLDVLNVYHDESAYHAG-LSAGDKIIAIDHL---QA-TEQSV---KRILERYIPGDTVTIHAFRR 553 (597)
T ss_dssp CCSEEEEEE-TTEEEEEEECTTSHHHHHT-CCTTCEEEEETTE---EC-CTTTH---HHHHTTCCTTCEEEEEEEET
T ss_pred ccceEEecc-CCeEEEEEeCCCChHHHCC-CCCCCEEEEECCE---EC-CHHHH---HHHHHhcCCCCEEEEEEEEC
Confidence 488888775 4689999999999999999 9999999998743 44 34444 444442 23 5788888874
No 176
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=97.06 E-value=0.00032 Score=51.41 Aligned_cols=55 Identities=16% Similarity=0.352 Sum_probs=42.7
Q ss_pred CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc-c-CceEEEEeec
Q 026827 106 GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR-V-GPLLMKMQKR 168 (232)
Q Consensus 106 gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R-s-Gpv~LkLeR~ 168 (232)
|++|..|.+++.|++ | |++||+|+++... . ..++.+...+|+.. . .++.|++.|.
T Consensus 2 Gv~V~~V~~~spA~~-G-L~~GD~I~~InG~---~---v~~~~~l~~~l~~~~~g~~v~l~v~R~ 58 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-K-IEVGDKIISADGK---N---YQSAEKLIDYISSKKAGDKVTLKIERE 58 (91)
T ss_dssp CSSCCCCCCSSCCSS-C-CCSSCEEEEETTB---C---CSSHHHHHHHHSSCCSSCEECEEEESS
T ss_pred ceEEEEECCCChHHH-c-CCCCCEEEEECCE---E---CCCHHHHHHHHHcCCCCCEEEEEEEEC
Confidence 688999999999999 8 9999999998743 2 33445667777754 3 4689999884
No 177
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=97.03 E-value=0.00077 Score=49.34 Aligned_cols=57 Identities=9% Similarity=0.177 Sum_probs=43.7
Q ss_pred eEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhccc--CceEEEEeecCC
Q 026827 107 TYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV--GPLLMKMQKRYG 170 (232)
Q Consensus 107 vyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~Rs--Gpv~LkLeR~~~ 170 (232)
.+|.+|.+++-|+++| |++||+|+++... ++..+.++..+|.... .++.|.+.|.-+
T Consensus 4 p~V~~V~~~spA~~aG-l~~GD~I~~ing~------~v~~~~d~~~~l~~~~~~~~v~l~v~R~g~ 62 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQ-IAPGTELKAVDGI------ETPDWDAVRLQLVDKIGDESTTITVAPFGS 62 (95)
T ss_dssp CBEEEECTTSHHHHTT-CCTTCEEEEETTE------ECSSHHHHHHHHHHTTTCSEEEEEEECTTC
T ss_pred CEEEeeCCCCHHHHcC-CCCCCEEEEECCE------ECCCHHHHHHHHHHhcCCCcEEEEEEECCC
Confidence 4689999999999999 9999999998642 3345556666776443 478999998653
No 178
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.98 E-value=0.00023 Score=54.05 Aligned_cols=61 Identities=15% Similarity=0.334 Sum_probs=47.7
Q ss_pred CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeecC
Q 026827 104 DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRY 169 (232)
Q Consensus 104 dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~~ 169 (232)
+.+++|..|.+++.|+++| |++||+|+++-.. .+- -..+.++..+|+....++.|.+.|.-
T Consensus 60 ~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~---~v~-~~~~~~~~~~l~~~g~~v~l~v~r~~ 120 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAG-LCTGDRIIKVNGE---SVI-GKTYSQVIALIQNSDTTLELSVMPKD 120 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHT-CCSSCCCCEETTE---ECS-SCCHHHHHHHHHTCTTEEEEECCCCC
T ss_pred CCCEEEEEECCCChHHHcC-CCCCCEEEEECCE---ECC-CCCHHHHHHHHHcCCCEEEEEEEECC
Confidence 4689999999999999999 9999999998742 221 11566777888866678899988853
No 179
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=96.98 E-value=0.00054 Score=48.91 Aligned_cols=68 Identities=15% Similarity=0.174 Sum_probs=46.4
Q ss_pred CcceeEEeeeCCC---CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc-c-cCceEEEEee
Q 026827 93 QPYGLKFAKGRDG---GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-R-VGPLLMKMQK 167 (232)
Q Consensus 93 KPLGL~Fee~~dG---gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~-R-sGpv~LkLeR 167 (232)
+-+|+.-... +| |+.|..+.|++.|+++| |++||+|+++... .+ .++.+...++.. + ..++.|.+.|
T Consensus 5 ~~~~~~p~~~-~g~~~G~~V~~~~~~s~A~~aG-l~~GD~I~~ing~---~v---~~~~d~~~~~~~~~~g~~v~l~v~R 76 (87)
T 2i6v_A 5 QYVRLSQVKR-DDKVLGYRVSPGKDPVLFESIG-LQDGDMAVALNGL---DL---TDPNVMNTLFQSMNEMTEMSLTVER 76 (87)
T ss_dssp GTEEEEEEEE-TTEEEEEEEEECSCHHHHHHTT-CCTTCEEEEETTE---ET---TCHHHHHHHHHTGGGCSEEEEEEEE
T ss_pred hccceEEEee-CCeEEEEEEEeCCCCCHHHHCC-CCCCCEEEEECCE---EC---CCHHHHHHHHHhcCCCCEEEEEEEE
Confidence 4456555543 44 77888888888889999 9999999998743 33 344444445542 2 3578899987
Q ss_pred c
Q 026827 168 R 168 (232)
Q Consensus 168 ~ 168 (232)
.
T Consensus 77 ~ 77 (87)
T 2i6v_A 77 D 77 (87)
T ss_dssp T
T ss_pred C
Confidence 3
No 180
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=96.80 E-value=0.0011 Score=46.95 Aligned_cols=55 Identities=16% Similarity=0.465 Sum_probs=42.4
Q ss_pred eEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhccc-CceEEEEeec
Q 026827 107 TYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRV-GPLLMKMQKR 168 (232)
Q Consensus 107 vyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~Rs-Gpv~LkLeR~ 168 (232)
++|..|.+++.|+++| +++||+|+++.. .+..++.+...++.... .++.|.+.|.
T Consensus 6 ~~V~~v~~~spA~~aG-l~~GD~I~~ing------~~v~~~~~~~~~l~~~~g~~v~l~v~R~ 61 (91)
T 2zpm_A 6 PVLENVQPNSAASXAG-LQAGDRIVXVDG------QPLTQWVTFVMLVRDNPGXSLALEIERQ 61 (91)
T ss_dssp CBCSEECTTSHHHHTT-CCTTCEEEEETT------EECCCHHHHHHHHHHCTTCCEEEEEEET
T ss_pred eEEEEECCCChHHhcC-CCCCCEEEEECC------eEcCCHHHHHHHHhcCCCCeEEEEEEEC
Confidence 5788999999999999 999999999874 23445566666776544 4788998874
No 181
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=96.80 E-value=0.0028 Score=55.31 Aligned_cols=56 Identities=20% Similarity=0.357 Sum_probs=45.3
Q ss_pred CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeec
Q 026827 105 GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (232)
Q Consensus 105 GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~ 168 (232)
.|++|.+|.+++.|+++| |++||+|+++... . ..++.+...+|+. ..++.|.+.|.
T Consensus 256 ~gv~V~~V~~~spA~~aG-l~~GDvI~~ing~---~---v~~~~~l~~~l~~-~~~v~l~v~R~ 311 (325)
T 1lcy_A 256 HGVLIHKVILGSPAHRAG-LRPGDVILAIGEQ---M---VQNAEDVYEAVRT-QSQLAVQIRRG 311 (325)
T ss_dssp SCEEEEEECTTSHHHHHT-CCTTCEEEEETTE---E---CCSHHHHHHHHTT-CSSEEEEEEET
T ss_pred CCeEEEEeCcCChHHHCC-CCCCCEEEEECCE---E---cCCHHHHHHHHhC-CCeEEEEEEEC
Confidence 589999999999999999 9999999998742 3 3445566677765 47899999884
No 182
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=96.73 E-value=0.0034 Score=56.05 Aligned_cols=71 Identities=15% Similarity=0.233 Sum_probs=50.0
Q ss_pred ceeEEeee--CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccC-ceEEEEeecCC
Q 026827 95 YGLKFAKG--RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVG-PLLMKMQKRYG 170 (232)
Q Consensus 95 LGL~Fee~--~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsG-pv~LkLeR~~~ 170 (232)
+|+.|... .+++++|..|.+++.|+++| |++||+|+++-.. .+-.. ...++...|+...| +|.|.+.|.-.
T Consensus 87 iG~~~~~~~~~~~~~~V~~v~~~spA~~aG-l~~GD~I~~Ing~---~v~~~-~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 87 VGLEITYDGGSGKDVVVLTPAPGGPAEKAG-ARAGDVIVTVDGT---AVKGM-SLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp CSEEEEECTTCSSCEEEEEECTTSHHHHTT-CCTTCEEEEETTE---ECTTC-CHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred EEEEEEEeecCCCcEEEEEeCCCChHHHcC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 67777764 25799999999999999999 9999999998753 11110 12345566765443 57888877543
No 183
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=96.69 E-value=0.0023 Score=47.20 Aligned_cols=56 Identities=11% Similarity=0.150 Sum_probs=38.9
Q ss_pred CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc-c-cCceEEEEeec
Q 026827 106 GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-R-VGPLLMKMQKR 168 (232)
Q Consensus 106 gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~-R-sGpv~LkLeR~ 168 (232)
|++|..+.|++.|+++| |++||+|+++-.. .+- ++.+...++.. + ..++.|.+.|.
T Consensus 38 G~~V~~~~pas~A~~aG-l~~GDvI~~ing~---~v~---~~~d~~~~~~~~~~g~~v~l~v~R~ 95 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIG-LQDGDMAVALNGL---DLT---DPNVMNTLFQSMNEMTEMSLTVERD 95 (105)
T ss_dssp EEEEEECSCTHHHHHHT-CCTTCEEEEETTE---ETT---STTHHHHHHHHHTTCSEEEEEEEET
T ss_pred EEEEecCCCCCHHHHcC-CCCCCEEEEECCE---ECC---CHHHHHHHHHhcCCCCeEEEEEEEC
Confidence 56677777777789999 9999999998743 333 33444444442 2 35789999873
No 184
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=96.55 E-value=0.0032 Score=57.40 Aligned_cols=57 Identities=14% Similarity=0.274 Sum_probs=48.8
Q ss_pred CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeec
Q 026827 105 GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (232)
Q Consensus 105 GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~ 168 (232)
.+++|.+|.+++.|+++| |++||+|+++... +..++.+...+|+...+++.|.+.|.
T Consensus 363 ~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~------~v~~~~~~~~~l~~~~~~v~l~v~R~ 419 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAG-LQKDDVIIGVNRD------RVNSIAEMRKVLAAKPAIIALQIVRG 419 (436)
T ss_pred CCEEEEEeCCCCHHHHcC-CCCCCEEEEECCE------ECCCHHHHHHHHHhCCCeEEEEEEEC
Confidence 489999999999999999 9999999998743 44567777888888778999999985
No 185
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=96.48 E-value=0.0034 Score=55.76 Aligned_cols=67 Identities=16% Similarity=0.361 Sum_probs=51.1
Q ss_pred ceeEEeee-----------CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc-c-Cce
Q 026827 95 YGLKFAKG-----------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR-V-GPL 161 (232)
Q Consensus 95 LGL~Fee~-----------~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R-s-Gpv 161 (232)
||+.+..- ...|++|.+|.+++.|+++| |++||+|+++-.. ++.++.+...+|+.. . .++
T Consensus 242 lGv~~~~~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aG-L~~GDvI~~ing~------~v~~~~~l~~~l~~~~~g~~v 314 (345)
T 3stj_A 242 LGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAG-VKAGDIITSLNGK------PLNSFAELRSRIATTEPGTKV 314 (345)
T ss_dssp CCEEEEECCHHHHHHTTCSCCSSEEEEEECTTSHHHHHT-CCTTCEECEETTE------ECSCHHHHHHHHHTSCTTCEE
T ss_pred cceeeEeecHHHHHhcCCCCCceEEEEEeccCChHHHcC-CCCCCEEEEECCE------ECCCHHHHHHHHHhcCCCCEE
Confidence 67777642 23589999999999999999 9999999997642 444566667777653 3 468
Q ss_pred EEEEeec
Q 026827 162 LMKMQKR 168 (232)
Q Consensus 162 ~LkLeR~ 168 (232)
.|++.|.
T Consensus 315 ~l~v~R~ 321 (345)
T 3stj_A 315 KLGLLRN 321 (345)
T ss_dssp EEEEEET
T ss_pred EEEEEEC
Confidence 9999884
No 186
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=96.46 E-value=0.0033 Score=55.40 Aligned_cols=68 Identities=22% Similarity=0.397 Sum_probs=50.6
Q ss_pred ceeEEeeeCC------CCeEEEEeCCCCCccccccccc-----------CcEEEEeecccCCceeeccchhhHHHHhhc-
Q 026827 95 YGLKFAKGRD------GGTYIDAIAPGGSADKTGMFQV-----------GDKVLATSAVFGTEIWPAAEYGRTMYTIRQ- 156 (232)
Q Consensus 95 LGL~Fee~~d------GgvyV~eV~pGGNAaKaG~I~V-----------GD~LvatSA~FGdElWpA~~~G~t~~AIr~- 156 (232)
|||.+..... .|++|.+|.+++.|+++| |++ ||+|+++-.. ++.++.+...+|..
T Consensus 235 lGi~~~~~~~~~~~~~~Gv~V~~V~~~spA~~AG-l~~~~~~~~~~l~~GDvI~~ing~------~v~~~~dl~~~l~~~ 307 (348)
T 3qo6_A 235 LGIKFAPDQSVEQLGVSGVLVLDAPPSGPAGKAG-LQSTKRDGYGRLVLGDIITSVNGT------KVSNGSDLYRILDQC 307 (348)
T ss_dssp CCCEECCTTTTTTTTCSSEEEEECCSSSHHHHHT-CCCCEECSSSCEECCCEECEETTB------CCSSSHHHHHHHTTC
T ss_pred cCcEEccchhhhhcCCceEEEEEecCCChHHHcC-CccccccccCCCCCCCEEEEECCE------EeCCHHHHHHHHHhC
Confidence 6887764321 499999999999999999 888 9999998643 34455666777754
Q ss_pred cc-CceEEEEeecC
Q 026827 157 RV-GPLLMKMQKRY 169 (232)
Q Consensus 157 Rs-Gpv~LkLeR~~ 169 (232)
+. .++.|++.|.-
T Consensus 308 ~~g~~v~l~v~R~g 321 (348)
T 3qo6_A 308 KVGDEVTVEVLRGD 321 (348)
T ss_dssp CTTCEEEEEEECSS
T ss_pred CCcCEEEEEEEECC
Confidence 33 46899998853
No 187
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=96.43 E-value=0.016 Score=45.18 Aligned_cols=77 Identities=12% Similarity=0.102 Sum_probs=53.8
Q ss_pred cEEEEEecC---cceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc--cC
Q 026827 85 EEYEVEIEQ---PYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR--VG 159 (232)
Q Consensus 85 eeyeVeL~K---PLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R--sG 159 (232)
+.++|+|.| .+|+.+..+.. +.+|..|.+. |..+| |++||+|+.+... .+- -....++..+|+.- -.
T Consensus 12 ~~~~V~L~Kg~~G~GFsI~~~~~-g~~V~~I~~~--~~~aG-L~~GD~Il~VNG~---~v~-~~~h~evv~~lk~~~~G~ 83 (113)
T 3soe_A 12 LLVTIPLIKGPKGFGFAIADSPT-GQKVKMILDS--QWCQG-LQKGDIIKEIYHQ---NVQ-NLTHLQVVEVLKQFPVGA 83 (113)
T ss_dssp EEEEEEEECBTTBSSEEEEEETT-EEEEEEESCG--GGSTT-CCTTCEEEEETTE---ECT-TSCHHHHHHHHHHSCTTC
T ss_pred CEEEEEEEECCCcccEEEeCCCC-CcEEEEecCh--HHhCC-CCCCCEEEEECCE---ECC-CCCHHHHHHHHHcCCCCC
Confidence 567888876 57888854433 5779999883 55666 9999999998742 222 12445778888853 24
Q ss_pred ceEEEEeecC
Q 026827 160 PLLMKMQKRY 169 (232)
Q Consensus 160 pv~LkLeR~~ 169 (232)
+|.|.+.|.-
T Consensus 84 ~v~L~V~R~g 93 (113)
T 3soe_A 84 DVPLLILRGG 93 (113)
T ss_dssp EEEEEEEESS
T ss_pred EEEEEEEECC
Confidence 7899999954
No 188
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=96.37 E-value=0.0088 Score=46.32 Aligned_cols=62 Identities=18% Similarity=0.321 Sum_probs=43.4
Q ss_pred eeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc-cc-CceEEEEeecCCc
Q 026827 100 AKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-RV-GPLLMKMQKRYGK 171 (232)
Q Consensus 100 ee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~-Rs-Gpv~LkLeR~~~~ 171 (232)
-....++++|..|.+++.|+++ |++||+|+++-.. ++..+.+...++.. +. .++.|++ | .|.
T Consensus 20 ~~~~~~gv~V~~V~~~spA~~a--L~~GD~Il~InG~------~v~~~~dl~~~l~~~~~g~~v~l~V-R-~g~ 83 (125)
T 2hga_A 20 QGHQPDGVQIDSVVPGSPASKV--LTPGLVIESINGM------PTSNLTTYSAALKTISVGEVINITT-D-QGT 83 (125)
T ss_dssp ---CCCCEEEEEECSSSGGGGT--SCTTCEEEEETTE------ECSSHHHHHHHHTTCCTTCEEEEEE-T-TEE
T ss_pred ccCCCCceEEEEECCCChHHHh--cCCCCEEEEECCE------EcCCHHHHHHHHHhcCCCCEEEEEE-E-CCE
Confidence 3335679999999999999988 9999999998642 33445555666663 33 4678888 5 444
No 189
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=96.20 E-value=0.0056 Score=50.21 Aligned_cols=57 Identities=9% Similarity=0.127 Sum_probs=38.8
Q ss_pred CeEEEEeCCCCCcccccccccC-cEEEEeecccCCceeeccchhhHHHHhhcc-cCceEEEEeec
Q 026827 106 GTYIDAIAPGGSADKTGMFQVG-DKVLATSAVFGTEIWPAAEYGRTMYTIRQR-VGPLLMKMQKR 168 (232)
Q Consensus 106 gvyV~eV~pGGNAaKaG~I~VG-D~LvatSA~FGdElWpA~~~G~t~~AIr~R-sGpv~LkLeR~ 168 (232)
|++|..|.|++-|+++| |++| |+|+++... .+-...++- ...++.. ..++.|.+.|.
T Consensus 17 G~~V~~V~~~SpA~~AG-L~~G~D~I~~ing~---~v~~~~~~~--~~~~~~~~g~~v~l~v~R~ 75 (209)
T 3rle_A 17 GYHVLRVQENSPGHRAG-LEPFFDFIVSINGS---RLNKDNDTL--KDLLKANVEKPVKMLIYSS 75 (209)
T ss_dssp EEEEEEECTTSHHHHTT-CCTTTEEEEEETTE---ECCSSSSHH--HHHHHHTTTSCEEEEEEET
T ss_pred EEEEEEECCCCHHHHCC-CCcCCeEEEEECCE---ECcCHHHHH--HHHHhcCCCCEEEEEEEec
Confidence 89999999999999999 9999 999998753 222222221 1222222 35678887764
No 190
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=96.19 E-value=0.0056 Score=56.36 Aligned_cols=57 Identities=12% Similarity=0.241 Sum_probs=48.1
Q ss_pred CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeec
Q 026827 105 GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (232)
Q Consensus 105 GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~ 168 (232)
.|++|.+|.+++.|+++| |++||+|+++.. .+..++.+...+|+....++.|.+.|.
T Consensus 386 ~Gv~V~~V~~gspA~~aG-L~~GD~I~~Vng------~~v~~~~~~~~~l~~~~~~v~l~v~R~ 442 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAG-IRPGDIIISANK------KPVTDVKSLQTIAQEKKKELLVQVLRG 442 (451)
T ss_dssp EEEEEEEECTTSHHHHHT-CCTTCEEEEETT------EECCSHHHHHHHTTSSCSCEEEEEEET
T ss_pred CceEEEEECCCCHHHHcC-CCCCCEEEEECC------EECCCHHHHHHHHhcCCCeEEEEEEEC
Confidence 489999999999999999 999999999864 345566777788887667899999884
No 191
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=96.18 E-value=0.0057 Score=47.86 Aligned_cols=44 Identities=20% Similarity=0.385 Sum_probs=36.3
Q ss_pred EEEEEec----CcceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeec
Q 026827 86 EYEVEIE----QPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSA 135 (232)
Q Consensus 86 eyeVeL~----KPLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA 135 (232)
+++++|. ..||+.+. +| +|..|.+++.|+++| +++||+|+.+-.
T Consensus 89 ~~~v~l~~~~~~~lG~~~~---~g--~v~~v~~~s~a~~aG-l~~GD~I~~ing 136 (166)
T 1w9e_A 89 ERTITMHKDSTGHVGFIFK---NG--KITSIVKDSSAARNG-LLTEHNICEING 136 (166)
T ss_dssp CEEEEEECCTTSCCSEEEE---TT--EEEEECTTSHHHHTT-CCSSEEEEEETT
T ss_pred cEEEEEecCCCCcEeEEEe---CC--EEEEEccCCHHHHcC-CCCCCEEEEECC
Confidence 3566666 45788776 34 899999999999999 999999999875
No 192
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=96.16 E-value=0.0099 Score=54.18 Aligned_cols=57 Identities=16% Similarity=0.388 Sum_probs=43.0
Q ss_pred CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcc--cCceEEEEeec
Q 026827 105 GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQR--VGPLLMKMQKR 168 (232)
Q Consensus 105 GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~R--sGpv~LkLeR~ 168 (232)
.|++|.+|.+++-|+++| |++||+|+++... +..++.+...++... -..+.|++.|.
T Consensus 263 ~G~~V~~V~~~spA~~aG-L~~GD~I~~vnG~------~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 321 (436)
T 4a8c_A 263 RGAFVSEVLPGSGSAKAG-VKAGDIITSLNGK------PLNSFAELRSRIATTEPGTKVKLGLLRN 321 (436)
T ss_pred cceEEEEECCCChHHHCC-CCCCCEEEEECCE------ECCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 589999999999999999 9999999998742 333445555555532 24678888774
No 193
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=96.11 E-value=0.0091 Score=54.98 Aligned_cols=67 Identities=18% Similarity=0.339 Sum_probs=50.5
Q ss_pred ceeEEeee-----------CC-CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc-cc-Cc
Q 026827 95 YGLKFAKG-----------RD-GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-RV-GP 160 (232)
Q Consensus 95 LGL~Fee~-----------~d-GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~-Rs-Gp 160 (232)
||+.+..- .. .|++|..|.+++-|+++| |++||+|+++-.. +..++.+...+|.. +. ..
T Consensus 260 lGv~~~~~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aG-L~~GDvI~~vnG~------~v~~~~~l~~~l~~~~~g~~ 332 (451)
T 3pv2_A 260 MGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAG-LKAGDIITQINDT------KITQATQVKTTISLLRVGST 332 (451)
T ss_dssp CCEEEEECCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTE------ECCSHHHHHHHHHTSCTTCE
T ss_pred ccceEEeccHHHHHhcCCCcCCceEEEEecCCCChHHHcC-CCCCCEEEEECCE------EcCCHHHHHHHHHhcCCCCE
Confidence 78877652 12 689999999999999999 9999999997643 33455566666664 33 46
Q ss_pred eEEEEeec
Q 026827 161 LLMKMQKR 168 (232)
Q Consensus 161 v~LkLeR~ 168 (232)
+.|++.|.
T Consensus 333 v~l~V~R~ 340 (451)
T 3pv2_A 333 VKIIVERD 340 (451)
T ss_dssp EEEEEEET
T ss_pred EEEEEEEC
Confidence 78998884
No 194
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=95.60 E-value=0.016 Score=53.27 Aligned_cols=56 Identities=18% Similarity=0.251 Sum_probs=40.3
Q ss_pred CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeecC
Q 026827 106 GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRY 169 (232)
Q Consensus 106 gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~~ 169 (232)
.++|..|.|++.|+++| |++||+|+++-.. .+-.. . ....|+....+|.|.+.|.-
T Consensus 91 ~~~V~~V~~gsPA~~AG-L~~GD~I~~InG~---~v~~~-~---~~~~l~~~g~~v~l~v~R~g 146 (403)
T 3k50_A 91 NALISYVVPGSPAEEAG-LQRGHWIMMMNGD---YITKK-V---ESELLQGSTRQLQIGVYKEV 146 (403)
T ss_dssp EEEEEEECTTSHHHHTT-CCTTCEEEEETTB---CBCTT-T---GGGGTSCSCEEEEEEEEEEE
T ss_pred eEEEEEeCCCChHHHcC-CCCCCEEEEECCE---Eccch-h---HHHHhhCCCCEEEEEEEeCC
Confidence 48899999999999999 9999999999753 22211 1 33455553346788887753
No 195
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=95.38 E-value=0.0027 Score=58.44 Aligned_cols=67 Identities=15% Similarity=0.347 Sum_probs=0.0
Q ss_pred ceeEEeee-CCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeec
Q 026827 95 YGLKFAKG-RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (232)
Q Consensus 95 LGL~Fee~-~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~ 168 (232)
+|+.+..- ...+++|.+|.+++.|+++| |++||+|+++-. ++..++.+...+|+...+++.|.+.|.
T Consensus 372 ~G~~l~~~~~~~gv~V~~V~~gspA~~aG-L~~GDiI~~vng------~~v~~~~~l~~~l~~~~~~v~l~v~R~ 439 (448)
T 1ky9_A 372 EGAEMSNKGKDQGVVVNNVKTGTPAAQIG-LKKGDVIIGANQ------QAVKNIAELRKVLDSKPSVLALNIQRG 439 (448)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred cceEeeccCCCCeEEEEEecCCCHHHHcC-CCCCCEEEEECC------EECCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 46666432 34589999999999999999 999999999864 233345555667776667888888874
No 196
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=95.02 E-value=0.04 Score=53.24 Aligned_cols=68 Identities=7% Similarity=0.079 Sum_probs=50.2
Q ss_pred cceeEEeeeCCCCeEEEEeCCC--------CCcccccc-cccCcEEEEeecccCCceeeccchhhHHHHhhcccC-ceEE
Q 026827 94 PYGLKFAKGRDGGTYIDAIAPG--------GSADKTGM-FQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVG-PLLM 163 (232)
Q Consensus 94 PLGL~Fee~~dGgvyV~eV~pG--------GNAaKaG~-I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsG-pv~L 163 (232)
-+|+.|.. .+++++|..|.+| +.|+++|. |+ ||+|++|-.. . ...+..+...|+...| +|.|
T Consensus 738 g~G~~~~~-~~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~---~---~~~~~~~~~~~~~~~g~~v~l 809 (1045)
T 1k32_A 738 RIACDFKL-DGDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGE---T---VGAGSNIYRVLSEKAGTSARI 809 (1045)
T ss_dssp BCSEEEEE-ETTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTE---E---CBTTBCHHHHHHTTTTSEEEE
T ss_pred eecEEEEE-eCCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCE---E---ccchhhHHHhhcCCCCCEEEE
Confidence 46788876 4689999999998 99999994 89 9999998753 2 2223355667776554 6789
Q ss_pred EEeecC
Q 026827 164 KMQKRY 169 (232)
Q Consensus 164 kLeR~~ 169 (232)
++.|.-
T Consensus 810 ~v~r~~ 815 (1045)
T 1k32_A 810 RLSGKG 815 (1045)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 998864
No 197
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=95.01 E-value=0.0041 Score=54.19 Aligned_cols=57 Identities=18% Similarity=0.324 Sum_probs=0.0
Q ss_pred CCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeec
Q 026827 104 DGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKR 168 (232)
Q Consensus 104 dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~ 168 (232)
..|++|.+|.+++.|+++| |++||+|+++-.. .+ ..+.++..+|+. ..++.|++.|.
T Consensus 253 ~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~---~v---~~~~~~~~~l~~-~~~v~l~v~R~ 309 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGG-LKENDVIISINGQ---SV---VSANDVSDVIKR-ESTLNMVVRRG 309 (332)
T ss_dssp -----------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcC-CCCCCEEEEECCE---EC---CCHHHHHHHHhC-CCeEEEEEEEC
Confidence 3589999999999999999 9999999998643 33 334444555554 45688888873
No 198
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=93.69 E-value=0.044 Score=50.41 Aligned_cols=57 Identities=18% Similarity=0.384 Sum_probs=42.8
Q ss_pred CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhc-cc-CceEEEEeec
Q 026827 105 GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQ-RV-GPLLMKMQKR 168 (232)
Q Consensus 105 GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~-Rs-Gpv~LkLeR~ 168 (232)
.+++|.+|.+++.|+++| |++||+|+++-.. . ..++.+...+|.. +. ..+.|++.|.
T Consensus 286 ~G~~V~~V~~gspA~~AG-L~~GDvI~~inG~---~---v~~~~~l~~~l~~~~~g~~v~l~v~R~ 344 (448)
T 1ky9_A 286 RGAFVSQVLPNSSAAKAG-IKAGDVITSLNGK---P---ISSFAALRAQVGTMPVGSKLTLGLLRD 344 (448)
T ss_dssp CSEECCCCTTCSSSTTTT-CCTTCEECBSSSS---B---CCSSHHHHHHTTSSBTTCCCEEEEESS
T ss_pred CceEEEEeccCCHHHHcC-CCCCCEEEEECCE---E---cCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 589999999999999999 9999999987642 2 3344555666664 22 4678888774
No 199
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=93.46 E-value=0.15 Score=48.88 Aligned_cols=39 Identities=21% Similarity=0.417 Sum_probs=31.9
Q ss_pred ceeEEeee------------CCCCeEEEEeCCCCCcccccccccCcEEEEeec
Q 026827 95 YGLKFAKG------------RDGGTYIDAIAPGGSADKTGMFQVGDKVLATSA 135 (232)
Q Consensus 95 LGL~Fee~------------~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA 135 (232)
||+.+..- ...|++|.+|.|++.|+++ |++||+|+++-.
T Consensus 255 LGv~~~~~~~~~~~~~~~l~~~~Gv~V~~V~~~spA~~a--l~~GDvI~~idg 305 (539)
T 4fln_A 255 LGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDASKV--LKEGDVIVSFDD 305 (539)
T ss_dssp CCEEEEECCCHHHHHHHTCSSSBCEEEEEECTTSGGGGT--CCTTCEEEEETT
T ss_pred cceEEEecCCHHHHHhcCCCCcCceeeecccCCChHHhC--ccCCCEEEEECC
Confidence 78877653 2359999999999999864 999999999764
No 200
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=93.43 E-value=0.014 Score=52.65 Aligned_cols=55 Identities=20% Similarity=0.407 Sum_probs=0.0
Q ss_pred EEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEee
Q 026827 108 YIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQK 167 (232)
Q Consensus 108 yV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR 167 (232)
+|..|.+||.|+++| |++||+|+++... .|-.. ...++..+|+...+.+.|++..
T Consensus 318 ~I~~V~~gs~A~~aG-L~~GD~Il~VNg~---~v~~~-s~~~~~~~l~~~~~~v~L~V~p 372 (388)
T 3suz_A 318 IICSLMRGGIAERGG-VRVGHRIIEINGQ---SVVAT-AHEKIVQALSNSVGEIHMKTMP 372 (388)
T ss_dssp ------------------------------------------------------------
T ss_pred EEEEeecCCHHHHcC-CCCCCEEEEECCE---ECCCC-CHHHHHHHHHhCCCeEEEEEEe
Confidence 899999999999999 9999999998753 33111 2244566777666777777643
No 201
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=62.98 E-value=10 Score=36.26 Aligned_cols=58 Identities=7% Similarity=-0.061 Sum_probs=41.9
Q ss_pred CeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhhHHHHhhcccCceEEEEeecCCc
Q 026827 106 GTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRYGK 171 (232)
Q Consensus 106 gvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~t~~AIr~RsGpv~LkLeR~~~~ 171 (232)
+|.|..|.|+.-|+..| +..||+|+.+-.. ++.++.+...+|+.- ..=+|+|+...+.
T Consensus 416 gVvvs~V~~~s~a~~~g-~~~gdiI~~vNg~------~V~s~~~l~~~l~~~-k~~~l~~~~~~~~ 473 (539)
T 4fln_A 416 IVILSQVLANEVNIGYE-DMNNQQVLKFNGI------PIRNIHHLAHLIDMC-KDKYLVFEFEDNY 473 (539)
T ss_dssp CEEEEEECCCGGGTTCS-SCCSEEEEEETTE------ECCSHHHHHHHHHTC-CSSEEEEEETTSC
T ss_pred EEEEEEecCCchhhhcC-CCCCCEEEeECCE------EcCCHHHHHHHHHHc-CCCeEEEEECCCE
Confidence 89999999999999999 8899999998743 566666667777742 2234444443343
No 202
>1jt8_A EIF-1A, probable translation initiation factor 1A; beta barrel, translation factor; NMR {Methanocaldococcus jannaschii} SCOP: b.40.4.5
Probab=44.02 E-value=13 Score=28.59 Aligned_cols=52 Identities=27% Similarity=0.303 Sum_probs=33.6
Q ss_pred cEEEEEecCcce--eEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeecc
Q 026827 85 EEYEVEIEQPYG--LKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAA 145 (232)
Q Consensus 85 eeyeVeL~KPLG--L~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~ 145 (232)
.+....+.+.|| +.--+-.||..+...|. |---|.=-|..||+|+- ++||.+
T Consensus 20 ~e~~g~V~~~lgn~~~~V~l~nG~~~la~i~--GKmRk~IwI~~GD~VlV-------e~~~yd 73 (102)
T 1jt8_A 20 NEILGIIEQMLGASRVRVRCLDGKTRLGRIP--GRLKNRIWVREGDVVIV-------KPWEVQ 73 (102)
T ss_dssp CCEEEEEECSSCSSEEEEEEETTEEEEEECC--HHHHHHHCCCSCEEEEE-------CCBCCT
T ss_pred CEEEEEEEEEcCCCEEEEEECCCCEEEEEEc--ccceeeEEecCCCEEEE-------EeccCC
Confidence 567778888888 33334467877777766 22223335788998886 577665
No 203
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=39.68 E-value=1.3e+02 Score=26.03 Aligned_cols=74 Identities=18% Similarity=0.215 Sum_probs=50.6
Q ss_pred ccEEEEEecCcceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecc--cCCceeeccchhhHHHHhh-cccCc
Q 026827 84 YEEYEVEIEQPYGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAV--FGTEIWPAAEYGRTMYTIR-QRVGP 160 (232)
Q Consensus 84 ~eeyeVeL~KPLGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~--FGdElWpA~~~G~t~~AIr-~RsGp 160 (232)
..+.|-|-.-||.+.+.. .|..+.|..-. +.| |.+|.+++++-+. =|..|=+-+ .++..|- ..+.|
T Consensus 25 ~~~~~~~~~~p~~~~~~~-~~~~~~v~~~~------~d~-~~~~~~~~~~ng~~~~~~~~~d~~---~v~~~iigk~N~P 93 (219)
T 2j3t_D 25 RAEAEKTFSYPLDLLLKL-HDERVLVAFGQ------RDG-IRVGHAVLAINGMDVNGRYTADGK---EVLEYLGNPANYP 93 (219)
T ss_dssp --CEEEEECSSCSSEEEE-CSSSEEEEECC------CTT-CCTTCEEEEETTEECBTTBCTTSS---BHHHHTTCGGGCS
T ss_pred CcceeeeccCCcceeeee-ccceeEEeecc------cCC-ccccceeeecCCccCCCcccccCc---eeeeeeecCCCCc
Confidence 345677888999999988 47788876543 667 9999999998653 332222211 4666554 66799
Q ss_pred eEEEEeec
Q 026827 161 LLMKMQKR 168 (232)
Q Consensus 161 v~LkLeR~ 168 (232)
++++.-.+
T Consensus 94 Lyir~f~~ 101 (219)
T 2j3t_D 94 VSIRFGRP 101 (219)
T ss_dssp EEEEEECC
T ss_pred eEEEecCC
Confidence 99997764
No 204
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.31 E-value=68 Score=24.89 Aligned_cols=52 Identities=13% Similarity=0.185 Sum_probs=36.0
Q ss_pred cEEEEEecCcce--eEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeecc
Q 026827 85 EEYEVEIEQPYG--LKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAA 145 (232)
Q Consensus 85 eeyeVeL~KPLG--L~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~ 145 (232)
.+....|.++|| +.--+..||..+...|.-.=. |.=-|..||+|+. ++||.+
T Consensus 15 ge~~g~V~~~lgn~~f~V~l~nG~~~la~i~GK~R--k~IwI~~GD~VlV-------e~~~yd 68 (111)
T 2dgy_A 15 QQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYR--KNIWIKRGDFLIV-------DPIEEG 68 (111)
T ss_dssp SCEEEEEEECCSSSEEEEECTTSCEEEEECCTTCC--SCCCCCSSCEEEE-------EECSSC
T ss_pred CeEEEEEEEeCCCCEEEEEeCCCCEEEEEechhhc--ccEEEcCCCEEEE-------EecccC
Confidence 456777778887 444455788888888874433 4446889999987 567654
No 205
>1c05_A Ribosomal protein S4 delta 41; two subdomains, unique topology, possible helix-turn-helix motif, ribosome; NMR {Geobacillus stearothermophilus} SCOP: d.66.1.2 PDB: 1c06_A 1eg0_A 1qd7_C
Probab=35.99 E-value=12 Score=30.04 Aligned_cols=29 Identities=24% Similarity=0.263 Sum_probs=22.0
Q ss_pred cccccchHHHHHHhhcCccccchhHHHHHHHHHHHH
Q 026827 174 QTGELSEKEIIRAERNSGVISNRVREIQMQNYMKKK 209 (232)
Q Consensus 174 ~~~~lteke~~raer~~G~i~~~~reiq~~ny~~k~ 209 (232)
++-.|-||+++|.. || ++|-|+.||.++-
T Consensus 6 y~~~l~~kqk~~~~-----yg--~~e~q~~~~~~~a 34 (159)
T 1c05_A 6 YGLQLQEKQKLRHM-----YG--VNERQFRKTFEEA 34 (159)
T ss_dssp HHHHHHHHHHHHHT-----TT--CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-----hC--CCHHHHHHHHHHH
Confidence 44567888888863 43 7799999999864
No 206
>3pjy_A Hypothetical signal peptide protein; DUF192 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.55A {Sinorhizobium meliloti}
Probab=34.72 E-value=31 Score=27.37 Aligned_cols=26 Identities=19% Similarity=0.438 Sum_probs=20.2
Q ss_pred CCeEEEEeCCCCCcccccccccCcEEEE
Q 026827 105 GGTYIDAIAPGGSADKTGMFQVGDKVLA 132 (232)
Q Consensus 105 GgvyV~eV~pGGNAaKaG~I~VGD~Lva 132 (232)
.--||-|+.. |-+++.| |++||+|.-
T Consensus 101 ~a~~VLEl~a-G~~~~~g-i~~Gd~v~~ 126 (136)
T 3pjy_A 101 PVAYVLELNA-GTVKRLG-VSPGDRLEG 126 (136)
T ss_dssp CEEEEEEEET-THHHHHT-CCTTCEEEE
T ss_pred ceeEEEEeCc-ChHHhcC-CCCCCEEEE
Confidence 3678888864 5667778 999999974
No 207
>3m7a_A Uncharacterized protein; structural genomics, unknown function, joint center for structural genomics, JCSG; HET: MSE; 1.22A {Novosphingobium aromaticivorans}
Probab=34.69 E-value=15 Score=29.49 Aligned_cols=24 Identities=33% Similarity=0.376 Sum_probs=18.7
Q ss_pred CeEEEEeCCCCCcccccccccCcEEE
Q 026827 106 GTYIDAIAPGGSADKTGMFQVGDKVL 131 (232)
Q Consensus 106 gvyV~eV~pGGNAaKaG~I~VGD~Lv 131 (232)
--||-|+.. |.+++.| |++||+|.
T Consensus 116 a~~VLEl~a-G~~~~~g-i~~Gd~v~ 139 (140)
T 3m7a_A 116 TLAVLEING-GLAARLG-IKPGDKVE 139 (140)
T ss_dssp CSEEEEEET-THHHHHT-CCTTCEEE
T ss_pred ccEEEEeCc-ChHHHcC-CCCCCEEe
Confidence 568888874 5567778 99999985
No 208
>1d7q_A Translation initiation factor 1A; OB-fold, beta-barrel, RNA-binding protein, gene regulation; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=25.90 E-value=1.3e+02 Score=24.44 Aligned_cols=52 Identities=17% Similarity=0.085 Sum_probs=35.2
Q ss_pred cEEEEEecCcce--eEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeecc
Q 026827 85 EEYEVEIEQPYG--LKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAA 145 (232)
Q Consensus 85 eeyeVeL~KPLG--L~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~ 145 (232)
.+....|.+.|| +.-.+-.||..++..|. |---+.=-|..||+|+- ++||.+
T Consensus 31 ge~~g~V~e~lgn~~f~V~l~nG~~~La~I~--GKmRk~IwI~~GD~VlV-------e~~~yd 84 (143)
T 1d7q_A 31 GQEYAQVIKMLGNGRLEAMCFDGVKRLCHIR--GKLRKKVWINTSDIILV-------GLRDYQ 84 (143)
T ss_dssp TEEEEEEEEECSSSEEEEEETTTEEEEEECC--SGGGGSCCCCTTCEEEE-------ECSSSS
T ss_pred CEEEEEEEEEcCCCEEEEEeCCCCEEEEEec--ccceeeEEecCCCEEEE-------eeccCC
Confidence 456677777777 44445578888887777 33334446889999987 566654
No 209
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=25.22 E-value=61 Score=25.10 Aligned_cols=18 Identities=17% Similarity=0.331 Sum_probs=14.1
Q ss_pred CcccccccccCcEEEEee
Q 026827 117 SADKTGMFQVGDKVLATS 134 (232)
Q Consensus 117 NAaKaG~I~VGD~LvatS 134 (232)
|-+.+..+++||+|+-+|
T Consensus 48 NGAAArl~~~GD~vII~a 65 (96)
T 1vc3_B 48 NGAAAHLVKPGDLVILVA 65 (96)
T ss_dssp EGGGGGTCCTTCEEEEEE
T ss_pred chHHHccCCCCCEEEEEE
Confidence 445556789999999887
No 210
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=24.25 E-value=87 Score=30.73 Aligned_cols=37 Identities=27% Similarity=0.358 Sum_probs=28.0
Q ss_pred ceeEEeeeCCCCeEEEEeCCCCCcccccccccCcEEEEeecc
Q 026827 95 YGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAV 136 (232)
Q Consensus 95 LGL~Fee~~dGgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~ 136 (232)
+|+.+....||.+||..+....+ .|.+||.|+.+-..
T Consensus 86 ~Pf~vki~iDG~i~V~dv~~~~s-----~I~vGdEIlsING~ 122 (583)
T 3dor_A 86 LPYTVQKSSDGRFYFVDIMTFSS-----EIRVGDELLEVDGA 122 (583)
T ss_dssp CSEEEEECTTSCEEEEEECSSCC-----SSCTTCEEEEETTE
T ss_pred CCeEEEEEECCcEEEEecccccc-----CCCCCCEEEEECCc
Confidence 46777767899999987733322 39999999998763
No 211
>2kpp_A LIN0431 protein; solution structure, structural genomics, PSI-2, protein initiative, northeast structural genomics consortium, NESG, function; NMR {Listeria innocua}
Probab=24.07 E-value=98 Score=23.99 Aligned_cols=47 Identities=15% Similarity=0.162 Sum_probs=33.9
Q ss_pred EEEEEecCcce-eEEeeeCCCCeEEEEeC-CCCCccccccc-ccCcEEEE
Q 026827 86 EYEVEIEQPYG-LKFAKGRDGGTYIDAIA-PGGSADKTGMF-QVGDKVLA 132 (232)
Q Consensus 86 eyeVeL~KPLG-L~Fee~~dGgvyV~eV~-pGGNAaKaG~I-~VGD~Lva 132 (232)
.++++++-+.| ...=+-.||+|.|.+-. |.--.-+.|-| ++|+.++-
T Consensus 30 ~~~i~i~~~~G~~n~IeIkdg~vrv~es~CPdkiCv~~GwIsk~Gq~IVC 79 (114)
T 2kpp_A 30 NEQFTIKGKGAQYNLMEVDGERIRIKEDNSPDQVGVKMGWKSKAGDTIVC 79 (114)
T ss_dssp EEEEEEEEETTEEEEEEEESSCEEEEEECCSSCHHHHHCSBCSTTCEEEE
T ss_pred ceEEEEecCCCCEEEEEEECCEEEEEECCCCCeehhhcCCcCCCCCEEEE
Confidence 45677777788 33344569999997665 67778888877 77888765
No 212
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=23.01 E-value=40 Score=26.20 Aligned_cols=18 Identities=17% Similarity=0.311 Sum_probs=13.5
Q ss_pred CcccccccccCcEEEEee
Q 026827 117 SADKTGMFQVGDKVLATS 134 (232)
Q Consensus 117 NAaKaG~I~VGD~LvatS 134 (232)
|-+.+..+++||+|+-+|
T Consensus 46 NGAAArl~~~GD~vII~a 63 (97)
T 1uhe_A 46 NGAAARKVAIGDVVIILA 63 (97)
T ss_dssp EGGGGGGCCTTCEEEEEE
T ss_pred chHHHccCCCCCEEEEEE
Confidence 334455689999999887
No 213
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=22.83 E-value=1.4e+02 Score=24.69 Aligned_cols=29 Identities=31% Similarity=0.363 Sum_probs=19.3
Q ss_pred CeEEEEeCCCC-----CcccccccccCcEEEEee
Q 026827 106 GTYIDAIAPGG-----SADKTGMFQVGDKVLATS 134 (232)
Q Consensus 106 gvyV~eV~pGG-----NAaKaG~I~VGD~LvatS 134 (232)
..||-.=.+|+ |-+.+..+++||+|+-+|
T Consensus 73 eTYvI~GerGSG~I~lNGAAArl~~~GD~VII~s 106 (143)
T 1pqh_A 73 STYAIAAERGSRIISVNGAAAHCASVGDIVIIAS 106 (143)
T ss_dssp EEEEEEECTTCCCEECCGGGGGTCCTTCEEEEEE
T ss_pred EEEEEEccCCCceEEechHHHccCCCCCEEEEEE
Confidence 44554444443 555566789999999888
No 214
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.74 E-value=57 Score=23.54 Aligned_cols=29 Identities=24% Similarity=0.222 Sum_probs=20.6
Q ss_pred CCcccccccccCcEEEEeecccCCceeeccch
Q 026827 116 GSADKTGMFQVGDKVLATSAVFGTEIWPAAEY 147 (232)
Q Consensus 116 GNAaKaG~I~VGD~LvatSA~FGdElWpA~~~ 147 (232)
..|.....++|||.+.|.-+ |..|.-..+
T Consensus 2 ~~~~~~~~~kvGd~clA~ws---Dg~~Y~A~I 30 (74)
T 2equ_A 2 SSGSSGFDFKAGEEVLARWT---DCRYYPAKI 30 (74)
T ss_dssp CSCCSCCCCCTTCEEEEECS---SSSEEEEEE
T ss_pred CcccCCCCCCCCCEEEEECC---CCCEEEEEE
Confidence 34445567999999999853 777766555
No 215
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=22.55 E-value=53 Score=25.13 Aligned_cols=12 Identities=25% Similarity=0.335 Sum_probs=9.8
Q ss_pred ccccCcEEEEee
Q 026827 123 MFQVGDKVLATS 134 (232)
Q Consensus 123 ~I~VGD~LvatS 134 (232)
.+++||+|++--
T Consensus 61 ~VkvGD~Vlf~k 72 (99)
T 1p3h_A 61 DVAEGDTVIYSK 72 (99)
T ss_dssp SCCTTCEEEEEC
T ss_pred ccCCCCEEEECC
Confidence 599999999843
No 216
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=21.81 E-value=43 Score=26.23 Aligned_cols=18 Identities=33% Similarity=0.508 Sum_probs=13.7
Q ss_pred CcccccccccCcEEEEee
Q 026827 117 SADKTGMFQVGDKVLATS 134 (232)
Q Consensus 117 NAaKaG~I~VGD~LvatS 134 (232)
|-+.+..+++||+|+-+|
T Consensus 47 NGAAArl~~~GD~vII~a 64 (102)
T 3plx_B 47 NGAAARLAEVGDKVIIMS 64 (102)
T ss_dssp EGGGGGGCCTTCEEEEEE
T ss_pred CcHHHhccCCCCEEEEEE
Confidence 344455679999999888
No 217
>2f9h_A PTS system, IIA component; alpha-beta structure, beta-barrel, dimer, structural genomic protein structure initiative; 1.57A {Enterococcus faecalis} SCOP: b.161.1.1
Probab=20.19 E-value=69 Score=25.52 Aligned_cols=62 Identities=10% Similarity=0.175 Sum_probs=42.2
Q ss_pred eeEEeeeCC----CCeEEEEeCCCCCcccccccccCcEEEEeecccCCceeeccchhh-HHHHhhcccCceEEEEee
Q 026827 96 GLKFAKGRD----GGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGR-TMYTIRQRVGPLLMKMQK 167 (232)
Q Consensus 96 GL~Fee~~d----GgvyV~eV~pGGNAaKaG~I~VGD~LvatSA~FGdElWpA~~~G~-t~~AIr~RsGpv~LkLeR 167 (232)
=|-|.++.- -..|++.+.+-. .+.|++||+|. ||+.-|.+-.+|. +...++. .|-++|+|.-
T Consensus 27 lIlFge~AP~~L~d~cvih~~~~~~----~~~i~~Gd~l~-----i~~~~Y~ItaVG~~A~~NL~~-LGHiTl~Fdg 93 (129)
T 2f9h_A 27 IILFGETATDTLKQHAVIQSFPEKD----QVTLAEGDHLK-----IGDTNYTITKVGSFANSNLQS-IAHSTLIFAD 93 (129)
T ss_dssp EEEECTTCCHHHHTTSEEEECTTGG----GCCCCTTCEEE-----ETTEEEEEEEECTTHHHHHHH-HCCEEEECSC
T ss_pred EEEeCCCCChHHheEEEEEEcCCCC----cCCcCCCCEEE-----ECCEEEEEEEEhHHHHHHHHh-cCCEEEEECC
Confidence 355655421 166777765331 25699999997 7888999999995 4445655 7888888764
Done!