BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026828
(232 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 339 bits (869), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 164/208 (78%), Positives = 182/208 (87%), Gaps = 1/208 (0%)
Query: 3 PISGYGVAKVLDSENPEFNKGDLVWGMTGWEEYSLITAPH-LFKIQHTDVPLSYYTGILG 61
PI+GYGVAKVL+S +P+F KGDLVWGMTGWEEYS+IT LFKI DVPLSYYTGILG
Sbjct: 76 PITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIHDKDVPLSYYTGILG 135
Query: 62 MPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 121
MPGMTAY GF+EVCSPK GE VF+SAASGAVGQLVGQFAK+LGCYVVGSAGSK+KVDLLK
Sbjct: 136 MPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLK 195
Query: 122 NKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMI 181
+KFGFDEAFNYKEE DL+AALKRYFP+GIDIYFENVGGK+LDAVL NMK+ GRIA CGMI
Sbjct: 196 SKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMI 255
Query: 182 SQYNLDKPEGVHNLMYLLGNEFAWKDFL 209
SQYNL++ EGVHNL L+ + FL
Sbjct: 256 SQYNLEQTEGVHNLFCLITKRIRMEGFL 283
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 318 bits (814), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 149/196 (76%), Positives = 171/196 (87%), Gaps = 2/196 (1%)
Query: 2 QPISGYGVAKVLDSENPEFNKGDLVWGMTGWEEYSLIT--APHLFKIQHTDVPLSYYTGI 59
QPI GYGV+++++S +P++ KGDL+WG+ WEEYS+IT FKIQHTDVPLSYYTG+
Sbjct: 76 QPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGL 135
Query: 60 LGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
LGMPGMTAY GFYEVCSPK GE V++SAASGAVGQLVGQ AK++GCYVVGSAGSK+KVDL
Sbjct: 136 LGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDL 195
Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACG 179
LK KFGFD+AFNYKEE+DL AALKR FP GIDIYFENVGGK+LDAVL NM + GRIA CG
Sbjct: 196 LKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCG 255
Query: 180 MISQYNLDKPEGVHNL 195
MISQYNL+ EGVHNL
Sbjct: 256 MISQYNLENQEGVHNL 271
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 167 bits (424), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 118/196 (60%), Gaps = 2/196 (1%)
Query: 8 GVAKVLDSENPEFNKGDLVWGMTGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTA 67
GV KVL S++P F GD V G G ++Y + +K+ + PL Y LGM GMTA
Sbjct: 78 GVGKVLVSKHPGFQAGDYVNGALGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTA 137
Query: 68 YVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFD 127
Y +V PK+GE V IS A+GAVG + GQ A+L GC VVG AG +K L + GFD
Sbjct: 138 YFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFD 197
Query: 128 EAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQY-NL 186
A +YK E DL A LKR P+GID++F+NVGG++LD VL + + RI CG ISQY N
Sbjct: 198 GAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNK 256
Query: 187 DKPEGVHNLMYLLGNE 202
+ G N + LL N
Sbjct: 257 EAVRGPANYLSLLVNR 272
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 166 bits (421), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 116/183 (63%), Gaps = 4/183 (2%)
Query: 6 GYGVAKVLDSENPEFNKGDLVWGMTGWEEYSLITAPHLFKIQHT---DVPLSYYTGILGM 62
G VA+V++S+N F G +V +GW + + L K+ +PLS G +GM
Sbjct: 69 GQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGM 128
Query: 63 PGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
PG+TAY G EVC K GE V +SAA+GAVG +VGQ AKL GC VVG+AGS +K+ LK
Sbjct: 129 PGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK- 187
Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMIS 182
+ GFD AFNYK L ALK+ P+G D YF+NVGG+ L+ VL MK G+IA CG IS
Sbjct: 188 QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAIS 247
Query: 183 QYN 185
YN
Sbjct: 248 VYN 250
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 161 bits (407), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 112/183 (61%), Gaps = 4/183 (2%)
Query: 6 GYGVAKVLDSENPEFNKGDLVWGMTGWEEYSLITAPHLFKIQHT---DVPLSYYTGILGM 62
G VAKV++S+N KG +V GW +S+ L K+ +PLS G +GM
Sbjct: 85 GQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGM 144
Query: 63 PGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
PG+TAY G E+C K GE V ++AA+GAVG +VGQ AKL GC VVG+ GS +KV L+
Sbjct: 145 PGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ- 203
Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMIS 182
K GFD FNYK L LK+ P+G D YF+NVGG+ + V+ MK GRIA CG IS
Sbjct: 204 KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS 263
Query: 183 QYN 185
YN
Sbjct: 264 TYN 266
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 160 bits (406), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 112/183 (61%), Gaps = 4/183 (2%)
Query: 6 GYGVAKVLDSENPEFNKGDLVWGMTGWEEYSLITAPHLFKIQHT---DVPLSYYTGILGM 62
G VAKV++S+N KG +V GW +S+ L K+ +PLS G +GM
Sbjct: 64 GQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGM 123
Query: 63 PGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKN 122
PG+TAY G E+C K GE V ++AA+GAVG +VGQ AKL GC VVG+ GS +KV L+
Sbjct: 124 PGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ- 182
Query: 123 KFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMIS 182
K GFD FNYK L LK+ P+G D YF+NVGG+ + V+ MK GRIA CG IS
Sbjct: 183 KLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAIS 242
Query: 183 QYN 185
YN
Sbjct: 243 TYN 245
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 106/194 (54%), Gaps = 7/194 (3%)
Query: 2 QPISGYGVAKVLDSENPEFNKGDLVWGMT-GWEEYSLITAPHLFKI--QHTDVPLSYYTG 58
Q + G G+ + +S++ KGD V W+ ++ L K+ Q D LSY+ G
Sbjct: 78 QVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLG 137
Query: 59 ILGMPGMTAYVGFYEVCSPKHG--ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD 115
+GMPG+T+ +G E G + + +S A+GA G + GQ LGC VVG G+ +
Sbjct: 138 AIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE 197
Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRI 175
K LL ++ GFD A NYK++ ++ L+ P G+D+YF+NVGG + D V+ M I
Sbjct: 198 KCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHI 256
Query: 176 AACGMISQYNLDKP 189
CG ISQYN D P
Sbjct: 257 ILCGQISQYNKDVP 270
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 106/194 (54%), Gaps = 7/194 (3%)
Query: 2 QPISGYGVAKVLDSENPEFNKGDLVWGMT-GWEEYSLITAPHLFKI--QHTDVPLSYYTG 58
Q + G G+ + +S++ KGD V W+ ++ L K+ Q D LSY+ G
Sbjct: 73 QVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLG 132
Query: 59 ILGMPGMTAYVGFYEVCSPKHG--ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD 115
+GMPG+T+ +G E G + + +S A+GA G + GQ LGC VVG G+ +
Sbjct: 133 AIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE 192
Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRI 175
K LL ++ GFD A NYK++ ++ L+ P G+D+YF+NVGG + D V+ M I
Sbjct: 193 KCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHI 251
Query: 176 AACGMISQYNLDKP 189
CG ISQYN D P
Sbjct: 252 ILCGQISQYNKDVP 265
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 106/192 (55%), Gaps = 7/192 (3%)
Query: 2 QPISGYGVAKVLDSENPEFNKGDLVWGMT-GWEEYSLITAPHLFKI--QHTDVPLSYYTG 58
Q G G+ V +S++ + KGD V W+ +++ L K+ Q D LSY+ G
Sbjct: 74 QVADGGGIGVVEESKHQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLG 133
Query: 59 ILGMPGMTAYVGFYEV--CSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD 115
+GMPG+T+ +G E S + + +S A+GA G L GQ LLGC VVG G+++
Sbjct: 134 AIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQE 193
Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRI 175
K L ++ GFD A NYK ++ L+ P G+D+YF+NVGG + +AV+ M I
Sbjct: 194 KCLFLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHI 252
Query: 176 AACGMISQYNLD 187
CG ISQY+ D
Sbjct: 253 ILCGQISQYSND 264
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 2 QPISGYGVAKVLDSENPEFNKGDLVWGMT-GWEEYSLITAPHLFKI--QHTDVPLSYYTG 58
Q G G+ V +S++ + KGD V W+ +++ L K+ Q D LSY+ G
Sbjct: 84 QVADGGGIGIVEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLG 143
Query: 59 ILGMPGMTAYVGFYEV--CSPKHGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD 115
+G PG+T+ +G E S + +S A+GA G L GQ LLGC VVG G+++
Sbjct: 144 AIGXPGLTSLIGVQEKGHISAGSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQE 203
Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRI 175
K L ++ GFD A NYK ++ L+ P G+D+YF+NVGG + + V+ I
Sbjct: 204 KCLFLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNVGGDISNTVISQXNENSHI 262
Query: 176 AACGMISQYNLD 187
CG ISQYN D
Sbjct: 263 ILCGQISQYNKD 274
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 40 APHLFKIQHTDVPLSYYTGI---------LGMPGMTAYVGFYEVCSPKHGECVFISAASG 90
AP F ++T VP S T + L + G TAY+ E+ G+ V ++AA+G
Sbjct: 124 APGSFA-EYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAG 182
Query: 91 AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGI 150
GQ Q +K C+V+G+ S +K LK+ G D NYK E + LK+ +PEG+
Sbjct: 183 GTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGV 240
Query: 151 DIYFENVGGKLLDAVLPNMKIRGRIAACGMISQYN 185
D+ +E+VGG + D + + +GR+ G IS Y
Sbjct: 241 DVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ 275
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 40 APHLFKIQHTDVPLSYYTGI---------LGMPGMTAYVGFYEVCSPKHGECVFISAASG 90
AP F ++T VP S T + L + G TAY+ E+ G+ V ++AA+G
Sbjct: 116 APGSFA-EYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAG 174
Query: 91 AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGI 150
GQ Q +K C+V+G+ S +K LK+ G D NYK E + LK+ +PEG+
Sbjct: 175 GTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGV 232
Query: 151 DIYFENVGGKLLDAVLPNMKIRGRIAACGMISQYN 185
D+ +E+VGG + D + + +GR+ G IS Y
Sbjct: 233 DVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ 267
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 40 APHLFKIQHTDVPLSYYTGI---------LGMPGMTAYVGFYEVCSPKHGECVFISAASG 90
AP F ++T VP S T + L + G TAY+ E+ G+ V ++AA+G
Sbjct: 95 APGSFA-EYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAG 153
Query: 91 AVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGI 150
GQ Q +K C+V+G+ S +K LK+ G D NYK E + LK+ +PEG+
Sbjct: 154 GTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDRPINYKTEP-VGTVLKQEYPEGV 211
Query: 151 DIYFENVGGKLLDAVLPNMKIRGRIAACGMISQYN 185
D+ +E+VGG + D + + +GR+ G IS Y
Sbjct: 212 DVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQ 246
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 8 GVAKVLDSENPEFNKGDLVWGMT----GWEEYSLITAPHLFKIQHTDVPLSYYTGI-LGM 62
GV + + F KGD V+ + G+ EY+L ++K+ L + G +G+
Sbjct: 97 GVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEK---LDFKQGAAIGI 153
Query: 63 PGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL-LK 121
P TAY K GE V + ASG VG Q A+ G ++G+AG+++ + L+
Sbjct: 154 PYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ 213
Query: 122 NKFGFDEAFNYKEEADLNAALKRYFPE-GIDIYFENVGGKLLDAVLPNMKIRGRIAACG 179
N G E FN++E ++ +K+Y E GIDI E + L L + GR+ G
Sbjct: 214 N--GAHEVFNHREVNYID-KIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 10/187 (5%)
Query: 4 ISGYGVAKVLDSENP---EFNKGDLVWG----MTGWEEYSLITAPHLFKI-QHTDVPLSY 55
+ G+ A V++ P +F G+ V + + + L A L K+ + D+ +
Sbjct: 63 VVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVH 122
Query: 56 YTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 115
G++ + GMTA ++ K G+ V I AA+G +G ++ +A+ LG V+G+ +++
Sbjct: 123 LAGLM-LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEE 181
Query: 116 KVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRI 175
K + + K G NY + + +G+D+ ++++G L L ++ RG
Sbjct: 182 KAETAR-KLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMC 240
Query: 176 AACGMIS 182
AA G S
Sbjct: 241 AAYGHAS 247
>pdb|1O89|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh
pdb|1O8C|A Chain A, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|B Chain B, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|C Chain C, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
pdb|1O8C|D Chain D, Crystal Structure Of E. Coli K-12 Yhdh With Bound Nadph
Length = 345
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 19/187 (10%)
Query: 12 VLDSENPEFNKGDLVWGMTGW----------EEYSLITAPHLFKI-QHTDVPLSYYTGIL 60
V SE+P F+ G V +TGW E + + L + Q D + G
Sbjct: 90 VRTSEDPRFHAGQEVL-LTGWGVGENHWGGLAEQARVKGDWLVAMPQGLDARKAMIIGTA 148
Query: 61 GMPGMTAYVGFYEV-CSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDL 119
G M + + P+ GE V ++ ASG VG LG VV +G + +
Sbjct: 149 GFTAMLCVMALEDAGVRPQDGEIV-VTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY 207
Query: 120 LKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACG 179
LK+ G E A+ K+ + ID VG K+L VL M G +AACG
Sbjct: 208 LKS-LGASRVLPRDEFAESRPLEKQVWAGAID----TVGDKVLAKVLAQMNYGGCVAACG 262
Query: 180 MISQYNL 186
+ + L
Sbjct: 263 LAGGFTL 269
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 55 YYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 114
Y G+L + +TA E K G+ V + AA+G VG ++ Q K+ G + + A +
Sbjct: 126 YAAGLLQV--LTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD 183
Query: 115 DKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGR 174
+K+ + K ++G + N +E L LK +G+D F++VG + L +K +G
Sbjct: 184 EKLKIAK-EYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGV 242
Query: 175 IA----ACGMISQYNLDK 188
A G+I +++ +
Sbjct: 243 FVSFGNASGLIPPFSITR 260
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 13/190 (6%)
Query: 6 GYGVAKVLDSENPEFNKGDLVWGMTG----WEEYSLITAPHLFKIQHTDVPLSY-YTGIL 60
G GV + + E F GD V TG + E ++ +L K+ + +S+ L
Sbjct: 65 GAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADS---VSFEQAAAL 121
Query: 61 GMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
+ G+T + K GE + AA+G VG L Q+AK LG ++G+ S +K
Sbjct: 122 MLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA 181
Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKL----LDAVLPNMKIRGRIA 176
K G E +Y E L+ + + ++ VG LD+V P +
Sbjct: 182 K-ALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGN 240
Query: 177 ACGMISQYNL 186
A G +S NL
Sbjct: 241 ASGPVSGVNL 250
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 5/148 (3%)
Query: 65 MTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
+TA+ + + G+ V + AA V Q AKL G V+ +AGS+DK+ K
Sbjct: 152 LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL 210
Query: 125 GFDEAFNYKEEADLNAALKRYF-PEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQ 183
G DE NY D ++R +G D ++ G + V+ GRIA G S
Sbjct: 211 GADETVNYTHP-DWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSG 269
Query: 184 YNLDKP--EGVHNLMYLLGNEFAWKDFL 209
Y P + + +LG+ A K L
Sbjct: 270 YEGTLPFAHVFYRQLSILGSTMASKSRL 297
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 65 MTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
+TA+ + V + + G+ V I A VG Q ++ G + +AGS+ K+ + K
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM-AEKL 206
Query: 125 GFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQY 184
G FNYK+E A LK G+++ + +GG + + + + GR G++
Sbjct: 207 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 266
Query: 185 NLDKP 189
+++ P
Sbjct: 267 DINGP 271
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 65 MTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
+TA+ + V + + G+ V I A VG Q ++ G + +AGS+ K+ + K
Sbjct: 132 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQM-AEKL 190
Query: 125 GFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQY 184
G FNYK+E A LK G+++ + +GG + + + + GR G++
Sbjct: 191 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 250
Query: 185 NLDKP 189
+++ P
Sbjct: 251 DINGP 255
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 60/146 (41%), Gaps = 21/146 (14%)
Query: 23 GDLVWGMT---GWEEYSLITAPHLF-------KIQHTDVPLSYYTGILGMPGMTAYVGFY 72
GD V G+ + EY L+ A + ++ +P +++T + +
Sbjct: 110 GDKVCGLANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFT---------VWANLF 160
Query: 73 EVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNY 132
+ GE V I + +G Q A+ G V +AGS K + + + G NY
Sbjct: 161 QXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKRGINY 219
Query: 133 KEEADLNAALKRYFPEGIDIYFENVG 158
+ E D A +K +G+DI + +G
Sbjct: 220 RSE-DFAAVIKAETGQGVDIILDXIG 244
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 13/157 (8%)
Query: 8 GVAKVLDSENPEFNKGDLVWGMT---GWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPG 64
G+ + L + GD V W E ++KI D+ S M
Sbjct: 70 GIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPD-DMSFSEAAA-FPMNF 127
Query: 65 MTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
+TAYV +EV + + G V + +A G VGQ V Q + V S K + +K+
Sbjct: 128 VTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSV 187
Query: 125 G--FDEAFNYKEEADLNAALKRYFPEGIDIYFENVGG 159
FD +Y +E +KR EG+DI + + G
Sbjct: 188 THLFDRNADYVQE------VKRISAEGVDIVLDCLCG 218
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 34/164 (20%)
Query: 8 GVAKVLDSENPEFNKGDLVW-----GMTGWE-EYSLIT------AP-HLFKIQHTDVPLS 54
GV + + +E FN+GD+V+ G EY LI AP ++ Q +PL+
Sbjct: 69 GVVESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLT 128
Query: 55 YYTGILGMPGMTAYVGFYEVC------SPKHGECVFISAASGAVGQLVGQFAKLLGCYVV 108
G+TAY ++V + G+ + I +G VG + Q AK G V+
Sbjct: 129 ---------GITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVI 179
Query: 109 GSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDI 152
+A + ++ K K G D N+KE + L ++ +GI++
Sbjct: 180 TTASRNETIEWTK-KMGADIVLNHKE-----SLLNQFKTQGIEL 217
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 41.6 bits (96), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 65 MTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK---VDLLK 121
+TAY ++ + GE + + +A+G VG Q A+ LG V +A S+DK V+L +
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA-SEDKWQAVELSR 389
Query: 122 NKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACG 179
++ E+ L A R G+D+ ++ G+ DA L + GR G
Sbjct: 390 EHLASSRTCDF-EQQFLGATGGR----GVDVVLNSLAGEFADASLRMLPRGGRFLELG 442
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 62 MPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLK 121
+ G+T Y + K E AA+G VG + Q+AK LG ++G+ G+ K
Sbjct: 123 LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ-SA 181
Query: 122 NKFGFDEAFNYKEEADLNAALKRYF-PEGIDIYFENVGGKLLDAVLPNMKIRGRIAACG 179
K G + NY+EE DL LK + + + +++VG + L ++ RG + + G
Sbjct: 182 LKAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFG 239
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Query: 66 TAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF- 124
TAY + GE V I + SG VGQ A GC V + GS +K L+ +F
Sbjct: 1654 TAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFP 1713
Query: 125 GFDEA--FNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMIS 182
DE N ++ + L+ +G+D+ ++ + L A + + GR G
Sbjct: 1714 QLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFD 1773
Query: 183 QYN 185
N
Sbjct: 1774 LSN 1776
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Query: 64 GMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNK 123
G+TA+ E + G+ V + +G V Q AK G V+ ++ S++K+D
Sbjct: 174 GLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFA 231
Query: 124 FGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQ 183
G D N EE + G D E GG L L + GRI+ G++
Sbjct: 232 LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG 291
Query: 184 YNLDKPEG 191
+ + P G
Sbjct: 292 FEVSGPVG 299
>pdb|3NX4|A Chain A, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
pdb|3NX4|B Chain B, Crystal Structure Of The Yhdh Oxidoreductase From
Salmonella Enterica In Complex With Nadp
Length = 324
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 75/189 (39%), Gaps = 29/189 (15%)
Query: 15 SENPEFNKGDLVWGMTGW----------EEYSLITAPHLFKIQHTDVPL---SYYTGILG 61
SE+P F+ G V +TGW E + + L + P S I+G
Sbjct: 72 SEDPRFHAGQEVL-LTGWGVGENHWGGLAERARVKGDWLVAL-----PAGLSSRNAXIIG 125
Query: 62 MPGMTAYVGFYEV----CSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV 117
G TA + + P+ GE V ++ ASG VG LG V +G +
Sbjct: 126 TAGFTAXLCVXALEDAGIRPQDGEVV-VTGASGGVGSTAVALLHKLGYQVAAVSGRESTH 184
Query: 118 DLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAA 177
LK+ G + + E A+ K+ + ID VG K+L VL G +AA
Sbjct: 185 GYLKS-LGANRILSRDEFAESRPLEKQLWAGAID----TVGDKVLAKVLAQXNYGGCVAA 239
Query: 178 CGMISQYNL 186
CG+ + L
Sbjct: 240 CGLAGGFAL 248
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 61 GMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLL 120
G+ +TA+ EV GE V I +A+G VG AK++G + +AGS K ++L
Sbjct: 20 GVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML 79
Query: 121 KNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGK 160
++ G + + + + L+ G+D+ ++ G+
Sbjct: 80 -SRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGE 118
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 88/225 (39%), Gaps = 40/225 (17%)
Query: 4 ISGYGVAKVLDSENPE---FNKGDLVWGMTGW--------------EEYSLITAPHLFKI 46
I G +A + + PE F GD V+G+TG + L + P
Sbjct: 66 ILGXDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTX 125
Query: 47 QHTDV-PLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGC 105
+ V PL + +TA+ G + + G+ V I G VG + Q A G
Sbjct: 126 RQASVLPLVF---------ITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA 176
Query: 106 YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAV 165
V +A D ++ +++ G +E D A + +G D+ ++ +GG +LDA
Sbjct: 177 RVFATARGSD-LEYVRD-LGATPIDASREPEDYAA--EHTAGQGFDLVYDTLGGPVLDAS 232
Query: 166 LPNMKIRGRIAACGMISQYNLDKP--------EGVHNLMYLLGNE 202
+K G + +C + L P GV L LL NE
Sbjct: 233 FSAVKRFGHVVSCLGWGTHKL-APLSFKQATYSGVFTLHTLLANE 276
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 5/136 (3%)
Query: 28 GMTGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISA 87
G+ W ++ + L ++ +D+PL LG+ TAY + + G+ V +A
Sbjct: 105 GLGTWRTEAVFSEEALIQV-PSDIPLQS-AATLGVNPCTAYRMLMDFEQLQPGDSVIQNA 162
Query: 88 ASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL-NAALKRYF 146
++ VGQ V Q A LG + + + L ++ A + E +L +K +F
Sbjct: 163 SNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFF 222
Query: 147 PE--GIDIYFENVGGK 160
+ + VGGK
Sbjct: 223 KDMPQPRLALNCVGGK 238
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 5/136 (3%)
Query: 28 GMTGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISA 87
G+ W ++ + L ++ +D+PL LG+ TAY + + G+ V +A
Sbjct: 118 GLGTWRTEAVFSEEALIQV-PSDIPLQS-AATLGVNPCTAYRMLMDFEQLQPGDSVIQNA 175
Query: 88 ASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADL-NAALKRYF 146
++ VGQ V Q A LG + + + L ++ A + E +L +K +F
Sbjct: 176 SNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFF 235
Query: 147 PE--GIDIYFENVGGK 160
+ + VGGK
Sbjct: 236 KDMPQPRLALNCVGGK 251
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 66/184 (35%), Gaps = 38/184 (20%)
Query: 63 PGMTAYVGFYEVCSP-----KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV 117
PG+ + ++ S K G+ V I ASG +G QFA G + S K
Sbjct: 207 PGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA 266
Query: 118 DLLKN--------------KFGFDEAFNYKEEADLNAALKRYFP----EGIDIYFENVGG 159
++ + +F DE N ++ + KR E IDI FE+ G
Sbjct: 267 EICRAMGAEAIIDRNAEGYRFWKDE--NTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR 324
Query: 160 KLLDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLLGNEFAWKDFLPVIST--TNI 217
+ A + + G I C S Y M+ N + W +I + N
Sbjct: 325 ETFGASVFVTRKGGTITTCASTSGY-----------MHEYDNRYLWMSLKRIIGSHFANY 373
Query: 218 RNSW 221
R +W
Sbjct: 374 REAW 377
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEADLN 139
G V IS A+G +G L Q+AK +G V+G G + K +L ++ G + ++ +E D+
Sbjct: 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGEVFIDFTKEKDIV 228
Query: 140 AALKR 144
A+ +
Sbjct: 229 GAVLK 233
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 64/182 (35%), Gaps = 34/182 (18%)
Query: 63 PGMTAYVGFYEVCSP-----KHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKV 117
PG+ + ++ S K G+ V I ASG +G QFA G + S K
Sbjct: 225 PGLVNSTAYRQLVSRNGAAMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA 284
Query: 118 DLLKN--------------KFGFDEAFNYKEEADLNAALKRYFP--EGIDIYFENVGGKL 161
++ ++ KF DE +E R E IDI FE+ G +
Sbjct: 285 EICRSMGAEAIIDRNAEGYKFWKDEHTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRET 344
Query: 162 LDAVLPNMKIRGRIAACGMISQYNLDKPEGVHNLMYLLGNEFAWKDFLPVIST--TNIRN 219
A + + G I C S Y M+ N + W +I + N R
Sbjct: 345 FGASVYVTRKGGTITTCASTSGY-----------MHEYDNRYLWMSLKRIIGSHFANYRE 393
Query: 220 SW 221
++
Sbjct: 394 AY 395
>pdb|1VDY|A Chain A, Nmr Structure Of The Hypothetical Enth-Vhs Domain
At3g16270 From Arabidopsis Thaliana
pdb|2DCP|A Chain A, Fully Automated Nmr Structure Determination Of The
Enth-Vhs Domain At3g16270 From Arabidopsis Thaliana
Length = 140
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 95 LVGQFAKLLGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEAD------LNAALKRYFPE 148
+V Q A L Y VG +GS+ + ++ +N F+YK D LN A++ E
Sbjct: 64 IVKQKALRLIKYAVGKSGSEFRREMQRNSVAVRNLFHYKGHPDPLKGDALNKAVRETAHE 123
Query: 149 GIDIYFENVGG 159
I F G
Sbjct: 124 TISAIFSEENG 134
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 28 GMTGWEEYSLITAPHLFKIQHTDVPLSYYTGILGMPGMTAYVGFYEVCSPKHGECVFISA 87
G W+EY +A F + D + + + +TA+V E + + + + ++A
Sbjct: 95 GEGTWQEYVKTSAD--FVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNA 152
Query: 88 ASGAVGQLVGQFAKLLGCYVVG-SAGSKDKVDLLK 121
A+G L Q +++L ++ + +K +LL+
Sbjct: 153 CGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR 187
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 65 MTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
+TAY+ + + GE V + AA+GA+G Q A+ +G V+ +A +K+ L
Sbjct: 112 LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL 169
Query: 125 GFDEAFNYKEEADLNAALKRYFPEGIDIYFENVGGKLLDAVLPNMKIRGRIAACGMISQY 184
G +EA Y E + A G+D+ E V GK ++ L + GR+ I
Sbjct: 170 GAEEAATYAEVPERAKAWG-----GLDLVLE-VRGKEVEESLGLLAHGGRLVYIAPIPPL 223
Query: 185 NLDK 188
L +
Sbjct: 224 RLMR 227
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 65 MTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
+TAY+ + + GE V + AA+GA+G Q A+ +G V+ +A +K+ L
Sbjct: 112 LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL 169
Query: 125 GFDEAFNYKE 134
G +EA Y E
Sbjct: 170 GAEEAATYAE 179
>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|B Chain B, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|C Chain C, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|D Chain D, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
Length = 266
Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 80 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKV-----DLLKNKFGFDEAFNYK 133
G ++ A+G +G+ + + G +VG G++ DK+ DL K+ F F + +
Sbjct: 27 GRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDR 85
Query: 134 EEADLNAALKRYFPEGIDIYFENVG 158
+ A + EGIDI N G
Sbjct: 86 KSIKQLAEVAEREMEGIDILVNNAG 110
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 65 MTAYVGFYEVCSPKHGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKVDLLKNKF 124
+TAY+ + + GE V + AA+GA+G Q A+ G V+ +A +K+ L
Sbjct: 112 LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAXGLRVLAAASRPEKLA-LPLAL 169
Query: 125 GFDEAFNYKE 134
G +EA Y E
Sbjct: 170 GAEEAATYAE 179
>pdb|1ATG|A Chain A, Azotobacter Vinelandii Periplasmic Molybdate-Binding
Protein
Length = 231
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 90 GAVGQLVGQFAKLLGCYVVGSAGSKDKV 117
G + QL GQFAK G VV S+GS V
Sbjct: 12 GTLEQLAGQFAKQTGHAVVISSGSSGPV 39
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,766,113
Number of Sequences: 62578
Number of extensions: 345204
Number of successful extensions: 840
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 771
Number of HSP's gapped (non-prelim): 48
length of query: 232
length of database: 14,973,337
effective HSP length: 96
effective length of query: 136
effective length of database: 8,965,849
effective search space: 1219355464
effective search space used: 1219355464
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)