Query 026829
Match_columns 232
No_of_seqs 134 out of 1081
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 13:17:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026829.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026829hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1455 Lysophospholipase [Lip 100.0 3.3E-47 7.1E-52 288.5 19.7 225 1-225 88-312 (313)
2 PLN02385 hydrolase; alpha/beta 100.0 2.4E-37 5.1E-42 251.6 22.9 228 1-228 121-348 (349)
3 PLN02298 hydrolase, alpha/beta 100.0 3E-34 6.4E-39 231.9 23.3 229 1-229 93-321 (330)
4 COG2267 PldB Lysophospholipase 100.0 1.8E-31 3.9E-36 211.0 19.2 225 1-228 67-297 (298)
5 PHA02857 monoglyceride lipase; 100.0 3E-30 6.5E-35 203.5 22.2 216 1-226 58-274 (276)
6 TIGR01607 PST-A Plasmodium sub 100.0 5.2E-29 1.1E-33 200.8 20.6 216 1-223 80-331 (332)
7 PRK10749 lysophospholipase L2; 100.0 1.5E-28 3.3E-33 198.4 22.1 221 1-225 87-329 (330)
8 PLN02652 hydrolase; alpha/beta 100.0 1.5E-28 3.2E-33 201.4 22.1 222 1-231 169-393 (395)
9 PLN02824 hydrolase, alpha/beta 100.0 2.7E-27 5.8E-32 188.4 16.2 213 1-225 61-294 (294)
10 PLN02965 Probable pheophorbida 99.9 1.4E-26 3.1E-31 180.6 16.2 207 1-225 36-253 (255)
11 TIGR02240 PHA_depoly_arom poly 99.9 2.8E-26 6E-31 181.0 15.1 206 1-227 57-268 (276)
12 PRK03592 haloalkane dehalogena 99.9 6.4E-26 1.4E-30 180.5 16.6 214 1-228 59-292 (295)
13 PRK10349 carboxylesterase BioH 99.9 5.3E-26 1.1E-30 177.5 12.0 202 1-222 45-253 (256)
14 PRK00870 haloalkane dehalogena 99.9 5.7E-25 1.2E-29 175.7 16.0 209 1-225 79-301 (302)
15 PLN02679 hydrolase, alpha/beta 99.9 2.5E-25 5.5E-30 181.5 13.6 213 1-225 120-357 (360)
16 PLN03087 BODYGUARD 1 domain co 99.9 3.6E-24 7.8E-29 178.2 16.8 205 1-222 238-476 (481)
17 PRK03204 haloalkane dehalogena 99.9 1.6E-24 3.6E-29 171.6 14.0 203 1-222 66-285 (286)
18 PRK10673 acyl-CoA esterase; Pr 99.9 4.2E-24 9.1E-29 166.5 15.8 203 1-224 48-254 (255)
19 TIGR03611 RutD pyrimidine util 99.9 2.4E-24 5.2E-29 167.3 13.4 207 1-223 45-256 (257)
20 TIGR03343 biphenyl_bphD 2-hydr 99.9 3.2E-24 6.8E-29 169.6 13.7 206 1-223 66-281 (282)
21 PRK06489 hypothetical protein; 99.9 2E-23 4.3E-28 170.5 18.0 211 1-226 111-358 (360)
22 TIGR03056 bchO_mg_che_rel puta 99.9 1.9E-23 4.1E-28 164.5 16.2 208 1-223 60-278 (278)
23 COG1647 Esterase/lipase [Gener 99.9 2.8E-23 6E-28 151.3 15.6 196 1-224 48-243 (243)
24 TIGR01738 bioH putative pimelo 99.9 4.3E-24 9.3E-29 164.4 11.6 199 1-222 36-245 (245)
25 PLN02578 hydrolase 99.9 2.3E-23 5E-28 169.8 16.4 209 1-223 118-353 (354)
26 PLN03084 alpha/beta hydrolase 99.9 3.6E-23 7.8E-28 168.8 17.1 204 1-223 159-382 (383)
27 PRK11126 2-succinyl-6-hydroxy- 99.9 2.2E-23 4.7E-28 161.3 15.0 198 1-224 33-241 (242)
28 PRK08775 homoserine O-acetyltr 99.9 5.6E-24 1.2E-28 172.7 12.0 211 1-227 105-341 (343)
29 KOG1454 Predicted hydrolase/ac 99.9 4E-23 8.7E-28 165.1 14.9 212 1-226 92-325 (326)
30 PF12697 Abhydrolase_6: Alpha/ 99.9 1E-23 2.2E-28 160.2 10.8 190 1-211 30-226 (228)
31 PRK07581 hypothetical protein; 99.9 1.1E-22 2.3E-27 165.1 16.2 70 151-226 267-337 (339)
32 KOG4178 Soluble epoxide hydrol 99.9 5.7E-23 1.2E-27 158.9 13.5 212 1-226 77-321 (322)
33 TIGR02427 protocat_pcaD 3-oxoa 99.9 2.9E-23 6.3E-28 160.2 10.2 201 1-222 45-250 (251)
34 TIGR01250 pro_imino_pep_2 prol 99.9 4E-22 8.7E-27 157.1 13.5 203 1-223 59-288 (288)
35 PF00561 Abhydrolase_1: alpha/ 99.9 1.2E-22 2.5E-27 155.4 8.3 203 1-212 6-226 (230)
36 PLN02894 hydrolase, alpha/beta 99.9 2.5E-21 5.5E-26 159.8 16.5 216 1-224 137-388 (402)
37 TIGR03695 menH_SHCHC 2-succiny 99.9 1.5E-21 3.2E-26 150.4 12.8 205 1-222 33-250 (251)
38 KOG4409 Predicted hydrolase/ac 99.9 3.8E-21 8.2E-26 149.5 13.9 203 1-212 122-355 (365)
39 TIGR01392 homoserO_Ac_trn homo 99.9 1.6E-21 3.4E-26 158.9 11.5 208 1-222 78-350 (351)
40 TIGR01249 pro_imino_pep_1 prol 99.9 6.7E-21 1.5E-25 152.4 13.7 71 1-77 59-130 (306)
41 PRK14875 acetoin dehydrogenase 99.9 1.3E-20 2.9E-25 154.5 14.2 191 1-224 163-370 (371)
42 PRK13604 luxD acyl transferase 99.9 1.6E-20 3.5E-25 146.8 13.7 172 1-204 70-247 (307)
43 PLN02211 methyl indole-3-aceta 99.8 2.1E-20 4.6E-25 147.0 13.6 197 1-212 51-261 (273)
44 PLN02980 2-oxoglutarate decarb 99.8 1E-20 2.2E-25 177.9 13.9 213 1-230 1403-1644(1655)
45 PLN02511 hydrolase 99.8 1.6E-20 3.4E-25 154.5 13.3 216 1-226 135-366 (388)
46 PRK00175 metX homoserine O-ace 99.8 3.7E-20 7.9E-25 152.2 15.5 73 151-227 301-376 (379)
47 PRK06765 homoserine O-acetyltr 99.8 1.4E-19 3.1E-24 148.1 16.6 70 151-224 315-387 (389)
48 TIGR03100 hydr1_PEP hydrolase, 99.8 1.6E-19 3.4E-24 142.2 15.7 197 1-223 63-273 (274)
49 TIGR01836 PHA_synth_III_C poly 99.8 2.5E-19 5.4E-24 145.9 11.9 217 1-225 100-350 (350)
50 PRK05077 frsA fermentation/res 99.8 3.6E-18 7.7E-23 141.4 16.3 185 1-226 228-413 (414)
51 KOG1552 Predicted alpha/beta h 99.8 1.2E-18 2.7E-23 130.6 9.9 163 1-229 94-256 (258)
52 PRK10985 putative hydrolase; P 99.8 3.7E-18 8.1E-23 137.6 11.1 213 1-225 93-320 (324)
53 KOG2382 Predicted alpha/beta h 99.8 2.3E-17 4.9E-22 128.1 14.6 211 1-225 86-313 (315)
54 PRK05855 short chain dehydroge 99.7 3.6E-17 7.9E-22 141.7 13.4 63 155-224 229-291 (582)
55 KOG4391 Predicted alpha/beta h 99.7 6.1E-18 1.3E-22 123.1 6.6 173 1-227 112-284 (300)
56 PF00326 Peptidase_S9: Prolyl 99.7 1.6E-16 3.4E-21 120.7 13.3 166 20-228 42-212 (213)
57 PRK10566 esterase; Provisional 99.7 4.6E-16 1E-20 120.9 15.7 65 154-226 180-249 (249)
58 KOG2984 Predicted hydrolase [G 99.7 1E-16 2.2E-21 115.5 8.8 187 1-224 77-275 (277)
59 PRK11071 esterase YqiA; Provis 99.7 5.2E-16 1.1E-20 115.5 12.3 144 21-223 46-189 (190)
60 PLN02872 triacylglycerol lipas 99.7 9.9E-16 2.2E-20 125.6 14.6 219 1-230 113-394 (395)
61 COG0596 MhpC Predicted hydrola 99.7 1.9E-15 4.2E-20 116.6 12.6 68 1-77 56-123 (282)
62 TIGR01838 PHA_synth_I poly(R)- 99.6 2.4E-15 5.3E-20 126.8 11.5 54 153-208 409-462 (532)
63 COG3208 GrsT Predicted thioest 99.6 3.5E-14 7.6E-19 106.1 12.8 191 1-223 39-234 (244)
64 PRK07868 acyl-CoA synthetase; 99.6 5.4E-14 1.2E-18 128.4 16.6 72 154-228 292-364 (994)
65 PF12695 Abhydrolase_5: Alpha/ 99.6 2.4E-14 5.2E-19 101.8 9.4 114 1-201 32-145 (145)
66 KOG2564 Predicted acetyltransf 99.5 1.4E-13 3.1E-18 104.2 10.5 200 1-225 108-327 (343)
67 PRK11460 putative hydrolase; P 99.5 5.2E-13 1.1E-17 102.6 12.2 127 21-227 82-210 (232)
68 PF02230 Abhydrolase_2: Phosph 99.5 5E-13 1.1E-17 101.7 11.4 131 19-225 83-215 (216)
69 TIGR03101 hydr2_PEP hydrolase, 99.5 1.5E-13 3.4E-18 106.8 7.9 74 1-78 62-135 (266)
70 KOG4667 Predicted esterase [Li 99.5 4.4E-13 9.5E-18 97.8 9.5 175 1-206 68-244 (269)
71 PF03096 Ndr: Ndr family; Int 99.4 6.1E-13 1.3E-17 102.5 8.9 206 1-223 61-277 (283)
72 TIGR02821 fghA_ester_D S-formy 99.4 1.2E-11 2.6E-16 97.6 15.6 134 42-225 138-274 (275)
73 COG1506 DAP2 Dipeptidyl aminop 99.4 1.3E-12 2.7E-17 113.8 10.9 165 22-228 453-619 (620)
74 PLN02442 S-formylglutathione h 99.4 1.3E-11 2.9E-16 97.6 13.5 135 43-226 144-281 (283)
75 KOG2931 Differentiation-relate 99.4 1.5E-11 3.2E-16 94.0 12.6 208 1-223 84-304 (326)
76 COG2945 Predicted hydrolase of 99.4 8.2E-12 1.8E-16 89.8 9.6 139 1-223 66-205 (210)
77 PF01738 DLH: Dienelactone hyd 99.3 2.5E-11 5.4E-16 92.5 12.7 137 20-226 76-218 (218)
78 COG0429 Predicted hydrolase of 99.3 3.5E-11 7.6E-16 93.9 13.5 219 1-228 110-343 (345)
79 PF08840 BAAT_C: BAAT / Acyl-C 99.3 8.1E-12 1.8E-16 94.6 8.9 175 30-228 10-213 (213)
80 PF06342 DUF1057: Alpha/beta h 99.3 7E-11 1.5E-15 90.4 12.7 71 1-78 68-138 (297)
81 TIGR01840 esterase_phb esteras 99.3 3E-11 6.4E-16 91.7 10.4 52 25-76 78-129 (212)
82 PF08538 DUF1749: Protein of u 99.3 1.2E-10 2.5E-15 90.9 11.8 198 18-223 82-303 (303)
83 KOG1838 Alpha/beta hydrolase [ 99.2 4.2E-10 9.1E-15 90.8 14.4 197 1-206 160-368 (409)
84 PF05448 AXE1: Acetyl xylan es 99.2 1.4E-10 3.1E-15 92.8 11.7 167 19-225 152-320 (320)
85 PLN00021 chlorophyllase 99.2 2.7E-10 5.8E-15 91.0 12.5 127 43-229 127-287 (313)
86 TIGR01839 PHA_synth_II poly(R) 99.2 3.2E-10 7E-15 95.5 12.8 61 18-80 266-331 (560)
87 PF06821 Ser_hydrolase: Serine 99.2 2.4E-10 5.2E-15 83.3 9.1 120 18-206 38-158 (171)
88 PF06500 DUF1100: Alpha/beta h 99.2 4.6E-10 1E-14 91.2 11.5 184 1-227 224-411 (411)
89 PRK05371 x-prolyl-dipeptidyl a 99.1 5.8E-10 1.3E-14 98.9 12.1 206 1-227 285-521 (767)
90 TIGR01849 PHB_depoly_PhaZ poly 99.1 3.1E-09 6.7E-14 87.0 14.7 70 155-225 333-406 (406)
91 COG0400 Predicted esterase [Ge 99.1 1.3E-09 2.7E-14 81.5 11.0 105 42-225 99-205 (207)
92 TIGR00976 /NonD putative hydro 99.1 2.9E-10 6.2E-15 98.1 8.5 75 1-78 59-133 (550)
93 TIGR03230 lipo_lipase lipoprot 99.1 4.3E-10 9.3E-15 92.9 7.4 77 1-78 79-155 (442)
94 PF05728 UPF0227: Uncharacteri 99.1 7.5E-09 1.6E-13 76.4 13.0 54 158-222 133-186 (187)
95 COG2021 MET2 Homoserine acetyl 99.0 1.3E-09 2.7E-14 86.6 8.6 68 151-223 298-366 (368)
96 COG0412 Dienelactone hydrolase 99.0 2.7E-08 5.9E-13 76.5 15.1 138 19-227 89-235 (236)
97 PF10230 DUF2305: Uncharacteri 99.0 5.7E-08 1.2E-12 76.1 15.7 77 2-78 39-123 (266)
98 PRK10115 protease 2; Provision 98.9 1.9E-08 4E-13 88.7 13.0 167 23-227 505-677 (686)
99 COG3545 Predicted esterase of 98.9 3E-08 6.4E-13 70.8 11.1 119 17-204 41-159 (181)
100 PTZ00472 serine carboxypeptida 98.9 6E-08 1.3E-12 81.7 14.8 78 1-78 127-217 (462)
101 COG4757 Predicted alpha/beta h 98.9 1.8E-08 4E-13 74.8 9.4 200 1-222 63-280 (281)
102 PF00975 Thioesterase: Thioest 98.8 2.1E-07 4.6E-12 71.2 14.6 67 2-76 34-103 (229)
103 cd00707 Pancreat_lipase_like P 98.8 4.2E-09 9.2E-14 82.9 5.0 77 1-78 72-148 (275)
104 PLN02733 phosphatidylcholine-s 98.8 1.8E-08 3.9E-13 83.8 7.4 72 1-77 126-201 (440)
105 PRK10162 acetyl esterase; Prov 98.7 7.6E-07 1.6E-11 71.8 15.5 66 160-227 249-317 (318)
106 COG3243 PhaC Poly(3-hydroxyalk 98.6 1.2E-06 2.7E-11 70.9 13.1 58 18-77 158-217 (445)
107 TIGR03502 lipase_Pla1_cef extr 98.6 2.1E-07 4.5E-12 82.0 8.2 78 1-78 482-602 (792)
108 COG3571 Predicted hydrolase of 98.6 1.9E-06 4E-11 60.7 11.2 95 41-202 88-182 (213)
109 PF02129 Peptidase_S15: X-Pro 98.6 3.7E-07 8E-12 72.0 8.4 75 1-78 63-137 (272)
110 PF06028 DUF915: Alpha/beta hy 98.5 1.6E-06 3.5E-11 67.1 11.3 156 18-222 81-252 (255)
111 KOG2100 Dipeptidyl aminopeptid 98.5 1.1E-06 2.4E-11 78.1 11.5 154 25-226 591-748 (755)
112 PF03583 LIP: Secretory lipase 98.4 5.6E-05 1.2E-09 60.1 17.8 64 159-229 219-285 (290)
113 PF03959 FSH1: Serine hydrolas 98.4 4.8E-07 1E-11 68.6 5.8 47 156-204 158-204 (212)
114 PRK04940 hypothetical protein; 98.4 8E-06 1.7E-10 59.4 11.8 115 43-223 61-178 (180)
115 KOG3253 Predicted alpha/beta h 98.4 2.6E-06 5.7E-11 71.6 10.4 121 18-203 224-347 (784)
116 smart00824 PKS_TE Thioesterase 98.4 1E-05 2.2E-10 60.6 12.8 68 1-76 31-101 (212)
117 KOG3043 Predicted hydrolase re 98.4 1.4E-06 3E-11 64.7 7.5 71 156-226 161-241 (242)
118 PRK10252 entF enterobactin syn 98.4 1.4E-05 3.1E-10 76.0 15.9 68 1-76 1100-1170(1296)
119 PF07859 Abhydrolase_3: alpha/ 98.3 1.5E-06 3.3E-11 65.7 6.5 62 18-79 44-112 (211)
120 KOG2112 Lysophospholipase [Lip 98.3 7.2E-06 1.6E-10 60.4 9.3 58 159-224 144-203 (206)
121 COG3458 Acetyl esterase (deace 98.3 8.8E-06 1.9E-10 62.3 9.2 147 21-204 155-303 (321)
122 PF10503 Esterase_phd: Esteras 98.3 2.2E-05 4.8E-10 59.5 11.3 36 41-76 96-131 (220)
123 PF07819 PGAP1: PGAP1-like pro 98.2 3.8E-06 8.2E-11 64.2 6.7 38 40-77 83-123 (225)
124 PF12146 Hydrolase_4: Putative 98.2 1.2E-06 2.5E-11 55.4 2.7 30 1-30 49-78 (79)
125 KOG1553 Predicted alpha/beta h 98.1 7.4E-06 1.6E-10 64.7 5.9 68 1-76 274-344 (517)
126 KOG2551 Phospholipase/carboxyh 98.1 0.00014 3E-09 54.2 11.7 63 155-226 159-221 (230)
127 COG3319 Thioesterase domains o 98.0 3.6E-05 7.7E-10 59.6 8.2 58 16-78 44-104 (257)
128 KOG2281 Dipeptidyl aminopeptid 98.0 0.00013 2.9E-09 62.2 11.5 155 25-224 709-866 (867)
129 KOG2624 Triglyceride lipase-ch 98.0 0.00023 4.9E-09 58.7 12.6 60 18-79 138-201 (403)
130 PF00450 Peptidase_S10: Serine 98.0 6.6E-05 1.4E-09 62.7 9.7 78 1-78 91-182 (415)
131 PF08386 Abhydrolase_4: TAP-li 98.0 3.5E-05 7.7E-10 51.3 6.4 59 159-223 34-92 (103)
132 KOG3101 Esterase D [General fu 97.9 2.7E-05 5.9E-10 57.4 6.0 119 43-204 142-264 (283)
133 PF02273 Acyl_transf_2: Acyl t 97.9 0.0012 2.7E-08 50.1 14.9 171 2-204 64-240 (294)
134 PF09752 DUF2048: Uncharacteri 97.9 0.00037 8.1E-09 55.8 12.8 51 23-76 159-209 (348)
135 PF05677 DUF818: Chlamydia CHL 97.9 2.7E-05 5.9E-10 61.7 6.3 59 1-63 177-236 (365)
136 cd00741 Lipase Lipase. Lipase 97.9 2.1E-05 4.4E-10 56.5 5.1 56 18-75 6-65 (153)
137 COG0657 Aes Esterase/lipase [L 97.9 0.00053 1.1E-08 55.2 13.7 174 18-223 125-308 (312)
138 PF06057 VirJ: Bacterial virul 97.9 0.00018 3.9E-09 52.7 9.7 58 18-77 46-107 (192)
139 PF00756 Esterase: Putative es 97.9 2.1E-05 4.6E-10 61.1 5.2 55 21-78 97-151 (251)
140 PF03403 PAF-AH_p_II: Platelet 97.8 0.00031 6.8E-09 57.9 10.8 34 43-77 229-262 (379)
141 cd00519 Lipase_3 Lipase (class 97.8 3.5E-05 7.6E-10 59.1 4.5 59 17-77 105-168 (229)
142 PF02450 LCAT: Lecithin:choles 97.8 6E-05 1.3E-09 62.4 6.0 54 21-77 101-160 (389)
143 KOG3975 Uncharacterized conser 97.8 0.00033 7.1E-09 53.2 9.2 56 154-210 237-292 (301)
144 KOG1515 Arylacetamide deacetyl 97.7 0.0032 7E-08 50.9 15.2 67 157-225 265-335 (336)
145 PF10142 PhoPQ_related: PhoPQ- 97.7 0.0027 5.8E-08 51.9 13.8 64 156-227 259-322 (367)
146 PF11339 DUF3141: Protein of u 97.6 0.0021 4.6E-08 54.0 12.9 59 18-78 117-177 (581)
147 PRK10439 enterobactin/ferric e 97.6 0.0002 4.4E-09 59.6 6.8 34 43-76 289-322 (411)
148 PF05990 DUF900: Alpha/beta hy 97.6 0.00018 3.9E-09 55.3 5.9 53 23-77 76-137 (233)
149 COG1073 Hydrolases of the alph 97.6 0.00025 5.4E-09 56.0 6.7 71 155-226 227-298 (299)
150 COG4814 Uncharacterized protei 97.5 0.0042 9.1E-08 47.5 11.8 56 18-76 114-175 (288)
151 PF01764 Lipase_3: Lipase (cla 97.5 0.00023 4.9E-09 50.1 4.9 53 22-76 46-105 (140)
152 KOG3724 Negative regulator of 97.5 0.00016 3.5E-09 63.0 4.7 27 43-70 183-209 (973)
153 COG2819 Predicted hydrolase of 97.5 0.0003 6.6E-09 54.2 5.7 35 43-77 138-172 (264)
154 PF04301 DUF452: Protein of un 97.4 0.0031 6.8E-08 47.4 10.2 37 163-204 169-205 (213)
155 PF11187 DUF2974: Protein of u 97.3 0.00089 1.9E-08 51.1 6.7 34 42-75 84-121 (224)
156 KOG4627 Kynurenine formamidase 97.3 0.00035 7.6E-09 51.6 4.0 137 18-205 113-251 (270)
157 KOG2565 Predicted hydrolases o 97.2 0.012 2.7E-07 47.5 12.4 67 1-73 194-260 (469)
158 PF05577 Peptidase_S28: Serine 97.2 0.0016 3.4E-08 55.0 7.6 77 2-78 66-149 (434)
159 COG4099 Predicted peptidase [G 97.1 0.00084 1.8E-08 52.4 5.0 35 41-75 268-302 (387)
160 PLN02454 triacylglycerol lipas 97.1 0.0015 3.2E-08 53.9 6.6 54 22-77 208-271 (414)
161 KOG4840 Predicted hydrolases o 97.1 0.014 3E-07 43.9 11.0 58 19-78 86-145 (299)
162 PF12715 Abhydrolase_7: Abhydr 97.1 0.001 2.2E-08 54.0 5.2 51 25-76 209-259 (390)
163 PF05057 DUF676: Putative seri 97.1 0.0012 2.7E-08 50.2 5.4 20 42-61 78-97 (217)
164 PLN02571 triacylglycerol lipas 97.0 0.0018 3.9E-08 53.4 5.9 21 42-62 226-246 (413)
165 KOG2183 Prolylcarboxypeptidase 96.9 0.0023 5.1E-08 52.2 5.5 77 2-79 118-205 (492)
166 COG1770 PtrB Protease II [Amin 96.9 0.017 3.8E-07 50.0 10.9 57 18-78 507-563 (682)
167 PF05705 DUF829: Eukaryotic pr 96.8 0.048 1.1E-06 42.1 12.6 54 156-209 175-231 (240)
168 COG0627 Predicted esterase [Ge 96.8 0.001 2.3E-08 53.3 3.0 37 43-79 153-189 (316)
169 COG4188 Predicted dienelactone 96.7 0.0078 1.7E-07 48.7 7.2 57 153-209 245-302 (365)
170 PLN02847 triacylglycerol lipas 96.6 0.0024 5.2E-08 54.7 4.2 42 19-62 230-271 (633)
171 COG1075 LipA Predicted acetylt 96.6 0.005 1.1E-07 50.1 5.6 36 42-77 127-164 (336)
172 PF01674 Lipase_2: Lipase (cla 96.6 0.0031 6.8E-08 47.8 4.0 36 23-61 59-94 (219)
173 PF00151 Lipase: Lipase; Inte 96.6 0.0041 8.9E-08 50.4 4.9 57 22-78 130-188 (331)
174 PLN02162 triacylglycerol lipas 96.5 0.0077 1.7E-07 50.3 6.3 22 40-61 276-297 (475)
175 PF12740 Chlorophyllase2: Chlo 96.5 0.0076 1.6E-07 46.7 5.7 36 43-78 92-132 (259)
176 KOG1551 Uncharacterized conser 96.5 0.099 2.1E-06 40.5 11.3 65 154-225 296-366 (371)
177 KOG2369 Lecithin:cholesterol a 96.5 0.0054 1.2E-07 51.0 4.9 24 42-65 182-205 (473)
178 PLN00413 triacylglycerol lipas 96.4 0.0055 1.2E-07 51.3 4.9 23 39-61 281-303 (479)
179 PLN02408 phospholipase A1 96.4 0.0048 1E-07 50.2 4.5 20 43-62 201-220 (365)
180 PLN02517 phosphatidylcholine-s 96.4 0.0039 8.5E-08 53.5 4.1 36 41-76 212-262 (642)
181 PLN02310 triacylglycerol lipas 96.4 0.0055 1.2E-07 50.5 4.6 21 42-62 209-229 (405)
182 PLN02324 triacylglycerol lipas 96.4 0.0091 2E-07 49.3 5.7 20 42-61 215-234 (415)
183 PLN03037 lipase class 3 family 96.3 0.006 1.3E-07 51.6 4.5 21 42-62 318-338 (525)
184 PLN02934 triacylglycerol lipas 96.2 0.008 1.7E-07 50.7 4.9 23 39-61 318-340 (515)
185 PF06259 Abhydrolase_8: Alpha/ 96.2 0.021 4.6E-07 41.8 6.5 53 23-76 91-143 (177)
186 COG2382 Fes Enterochelin ester 96.2 0.0042 9E-08 48.8 2.8 35 43-77 178-212 (299)
187 PLN02802 triacylglycerol lipas 96.2 0.0077 1.7E-07 50.8 4.4 21 42-62 330-350 (509)
188 COG5153 CVT17 Putative lipase 96.2 0.011 2.4E-07 46.0 4.9 53 19-75 255-307 (425)
189 KOG4540 Putative lipase essent 96.2 0.011 2.4E-07 46.0 4.9 53 19-75 255-307 (425)
190 COG1505 Serine proteases of th 96.1 0.019 4.2E-07 49.2 6.5 168 20-226 478-647 (648)
191 PLN02761 lipase class 3 family 96.0 0.0095 2.1E-07 50.4 4.1 20 42-61 294-313 (527)
192 COG4782 Uncharacterized protei 96.0 0.02 4.4E-07 46.1 5.7 53 23-77 174-234 (377)
193 PF11144 DUF2920: Protein of u 95.9 0.019 4.1E-07 47.2 5.4 52 25-76 165-218 (403)
194 PLN02753 triacylglycerol lipas 95.8 0.015 3.2E-07 49.4 4.7 21 41-61 311-331 (531)
195 PLN02719 triacylglycerol lipas 95.8 0.013 2.7E-07 49.6 4.1 20 42-61 298-317 (518)
196 COG2936 Predicted acyl esteras 95.6 0.021 4.6E-07 49.0 4.8 74 1-77 86-159 (563)
197 KOG2237 Predicted serine prote 95.6 0.12 2.6E-06 44.9 9.1 55 23-77 530-584 (712)
198 PF12048 DUF3530: Protein of u 95.4 0.036 7.7E-07 44.6 5.4 34 43-76 194-228 (310)
199 COG3509 LpqC Poly(3-hydroxybut 95.3 0.064 1.4E-06 42.2 6.1 35 42-76 144-178 (312)
200 PF07224 Chlorophyllase: Chlor 95.1 0.052 1.1E-06 42.0 5.0 36 43-78 121-158 (307)
201 KOG4569 Predicted lipase [Lipi 95.1 0.036 7.8E-07 45.1 4.4 23 39-61 168-190 (336)
202 PF06850 PHB_depo_C: PHB de-po 95.0 0.046 1E-06 40.3 4.3 66 159-225 134-202 (202)
203 PF01083 Cutinase: Cutinase; 94.8 0.037 7.9E-07 40.8 3.6 39 39-77 78-122 (179)
204 PF05277 DUF726: Protein of un 94.6 0.11 2.4E-06 42.3 5.9 36 41-76 219-259 (345)
205 PF07082 DUF1350: Protein of u 94.5 0.11 2.5E-06 39.9 5.6 33 42-74 90-122 (250)
206 PF11288 DUF3089: Protein of u 94.4 0.077 1.7E-06 39.8 4.5 38 24-62 78-115 (207)
207 PLN02213 sinapoylglucose-malat 94.3 0.16 3.4E-06 41.2 6.4 78 1-78 7-97 (319)
208 PF10340 DUF2424: Protein of u 94.1 0.19 4.2E-06 41.2 6.4 58 21-80 176-238 (374)
209 COG3150 Predicted esterase [Ge 94.0 0.16 3.6E-06 36.5 5.2 58 155-223 128-187 (191)
210 PLN02213 sinapoylglucose-malat 93.7 0.19 4.2E-06 40.6 5.8 61 159-224 233-316 (319)
211 KOG2029 Uncharacterized conser 93.4 0.15 3.2E-06 43.9 4.8 37 26-62 510-546 (697)
212 KOG1282 Serine carboxypeptidas 93.3 0.35 7.5E-06 41.0 6.8 62 159-224 363-447 (454)
213 PF07519 Tannase: Tannase and 93.3 0.17 3.7E-06 43.3 5.0 64 159-224 353-426 (474)
214 PLN03016 sinapoylglucose-malat 92.4 0.41 8.8E-06 40.5 6.1 61 159-224 347-430 (433)
215 COG2830 Uncharacterized protei 92.2 1.3 2.9E-05 31.8 7.5 31 44-76 59-89 (214)
216 KOG2182 Hydrolytic enzymes of 91.9 0.59 1.3E-05 39.6 6.3 76 2-77 125-207 (514)
217 KOG1283 Serine carboxypeptidas 91.8 0.41 9E-06 38.2 5.1 73 5-77 82-166 (414)
218 KOG3847 Phospholipase A2 (plat 91.6 0.12 2.6E-06 41.1 1.9 34 43-77 242-275 (399)
219 PLN02209 serine carboxypeptida 91.5 0.58 1.3E-05 39.6 6.0 60 159-223 351-433 (437)
220 PLN02633 palmitoyl protein thi 90.6 1.3 2.9E-05 35.4 6.9 33 43-75 95-129 (314)
221 PLN03016 sinapoylglucose-malat 90.5 0.76 1.6E-05 38.9 5.8 73 4-77 125-210 (433)
222 PLN02209 serine carboxypeptida 90.3 0.79 1.7E-05 38.8 5.7 75 4-78 127-213 (437)
223 PLN02606 palmitoyl-protein thi 90.2 0.93 2E-05 36.2 5.7 54 21-75 75-130 (306)
224 KOG3967 Uncharacterized conser 89.6 1.4 3.1E-05 33.2 5.9 33 43-75 191-225 (297)
225 cd00312 Esterase_lipase Estera 89.0 0.2 4.3E-06 43.0 1.4 34 43-76 177-212 (493)
226 PF08237 PE-PPE: PE-PPE domain 88.0 1.2 2.5E-05 34.2 4.8 23 40-62 46-68 (225)
227 PF07519 Tannase: Tannase and 87.8 0.45 9.8E-06 40.7 2.7 35 44-78 117-151 (474)
228 PF02089 Palm_thioest: Palmito 87.2 2.3 4.9E-05 33.6 6.0 33 43-75 81-114 (279)
229 COG4947 Uncharacterized protei 86.3 0.24 5.1E-06 35.9 0.2 33 44-76 103-135 (227)
230 PF00135 COesterase: Carboxyle 82.5 1.6 3.5E-05 37.7 3.8 52 25-76 188-244 (535)
231 PF05576 Peptidase_S37: PS-10 82.2 4 8.7E-05 34.1 5.5 73 2-77 95-170 (448)
232 COG4287 PqaA PhoPQ-activated p 82.2 1.7 3.7E-05 35.6 3.3 48 156-204 326-373 (507)
233 COG4553 DepA Poly-beta-hydroxy 80.3 3 6.5E-05 33.1 4.0 70 159-229 339-411 (415)
234 COG2272 PnbA Carboxylesterase 80.0 1.9 4.1E-05 36.7 3.1 53 25-78 160-218 (491)
235 PF10605 3HBOH: 3HB-oligomer h 77.0 5.9 0.00013 34.8 5.1 47 156-202 551-604 (690)
236 KOG2541 Palmitoyl protein thio 76.1 11 0.00023 29.7 5.8 32 43-74 93-125 (296)
237 COG0218 Predicted GTPase [Gene 72.6 2 4.2E-05 32.1 1.2 24 154-177 130-153 (200)
238 KOG1202 Animal-type fatty acid 72.6 11 0.00024 36.3 5.9 67 3-74 2148-2216(2376)
239 KOG1282 Serine carboxypeptidas 72.0 19 0.00042 30.8 7.0 74 5-78 128-214 (454)
240 COG5023 Tubulin [Cytoskeleton] 61.3 15 0.00032 30.3 4.1 63 14-78 104-174 (443)
241 cd07212 Pat_PNPLA9 Patatin-lik 61.1 6.7 0.00015 31.7 2.2 18 45-62 35-52 (312)
242 PF00698 Acyl_transf_1: Acyl t 59.3 5.5 0.00012 32.2 1.4 18 43-60 85-102 (318)
243 TIGR00128 fabD malonyl CoA-acy 58.4 7 0.00015 30.9 1.9 18 43-60 84-101 (290)
244 PF12740 Chlorophyllase2: Chlo 58.2 64 0.0014 25.4 7.0 49 158-207 153-211 (259)
245 cd07225 Pat_PNPLA6_PNPLA7 Pata 58.1 13 0.00028 30.0 3.4 20 44-63 45-64 (306)
246 PF00091 Tubulin: Tubulin/FtsZ 58.1 34 0.00073 25.9 5.5 54 21-76 105-166 (216)
247 KOG2385 Uncharacterized conser 58.0 29 0.00064 30.1 5.4 34 41-74 446-484 (633)
248 COG2939 Carboxypeptidase C (ca 57.5 8.2 0.00018 33.1 2.2 35 43-77 199-236 (498)
249 PF06833 MdcE: Malonate decarb 57.2 17 0.00036 28.0 3.6 55 2-62 72-129 (234)
250 TIGR03712 acc_sec_asp2 accesso 57.1 17 0.00037 31.1 4.0 36 40-78 355-391 (511)
251 TIGR03131 malonate_mdcH malona 57.1 7.8 0.00017 30.8 2.0 19 42-60 76-94 (295)
252 PF10081 Abhydrolase_9: Alpha/ 56.3 30 0.00065 27.5 4.9 36 43-78 110-148 (289)
253 cd07227 Pat_Fungal_NTE1 Fungal 56.0 14 0.00031 29.1 3.2 22 41-62 36-58 (269)
254 smart00827 PKS_AT Acyl transfe 55.1 9 0.0002 30.4 2.0 18 43-60 83-100 (298)
255 PF14253 AbiH: Bacteriophage a 53.6 7.1 0.00015 30.5 1.2 12 43-54 236-247 (270)
256 KOG1516 Carboxylesterase and r 53.0 16 0.00036 31.9 3.5 33 43-75 196-230 (545)
257 PRK10279 hypothetical protein; 48.6 21 0.00045 28.8 3.1 21 43-63 34-54 (300)
258 KOG4372 Predicted alpha/beta h 48.6 5.6 0.00012 33.1 -0.1 17 43-59 151-167 (405)
259 cd07209 Pat_hypo_Ecoli_Z1214_l 45.7 16 0.00036 27.6 2.1 22 43-64 27-48 (215)
260 COG3673 Uncharacterized conser 45.3 46 0.00099 27.2 4.4 38 23-61 104-141 (423)
261 cd07207 Pat_ExoU_VipD_like Exo 44.5 18 0.00039 26.7 2.1 21 43-63 28-48 (194)
262 COG3946 VirJ Type IV secretory 44.1 34 0.00074 28.8 3.7 50 160-222 397-446 (456)
263 PF08250 Sperm_act_pep: Sperm- 42.5 8.1 0.00018 13.9 -0.0 6 48-53 1-6 (10)
264 cd07208 Pat_hypo_Ecoli_yjju_li 42.2 21 0.00045 27.9 2.2 22 44-65 29-50 (266)
265 TIGR02816 pfaB_fam PfaB family 42.1 17 0.00038 31.8 1.9 19 43-61 266-284 (538)
266 PF09949 DUF2183: Uncharacteri 42.1 83 0.0018 20.7 4.7 34 39-72 62-97 (100)
267 PLN02752 [acyl-carrier protein 41.8 17 0.00038 29.7 1.8 17 44-60 126-142 (343)
268 KOG2214 Predicted esterase of 41.0 6.7 0.00014 33.6 -0.8 30 42-71 202-231 (543)
269 PF09994 DUF2235: Uncharacteri 40.7 59 0.0013 25.8 4.6 22 40-61 90-111 (277)
270 PF06500 DUF1100: Alpha/beta h 40.5 52 0.0011 27.8 4.3 64 159-225 189-255 (411)
271 cd07198 Patatin Patatin-like p 40.5 24 0.00051 25.6 2.2 22 43-64 27-48 (172)
272 cd07232 Pat_PLPL Patain-like p 40.0 25 0.00053 29.7 2.4 28 43-70 96-123 (407)
273 cd07211 Pat_PNPLA8 Patatin-lik 39.9 21 0.00046 28.7 2.0 17 45-61 44-60 (308)
274 COG3887 Predicted signaling pr 39.6 71 0.0015 28.4 5.0 32 43-75 339-376 (655)
275 cd07217 Pat17_PNPLA8_PNPLA9_li 39.4 23 0.0005 29.1 2.1 18 45-62 44-61 (344)
276 COG0331 FabD (acyl-carrier-pro 39.3 19 0.00041 29.1 1.6 19 42-60 85-103 (310)
277 cd02188 gamma_tubulin Gamma-tu 38.3 1.3E+02 0.0028 25.7 6.4 35 19-55 109-143 (431)
278 PF00875 DNA_photolyase: DNA p 37.4 1.4E+02 0.0031 21.2 5.9 24 145-168 52-75 (165)
279 PRK14759 potassium-transportin 36.5 27 0.00059 17.1 1.3 8 60-67 22-29 (29)
280 cd00286 Tubulin_FtsZ Tubulin/F 36.2 1.7E+02 0.0038 23.7 6.7 31 21-53 70-100 (328)
281 COG2939 Carboxypeptidase C (ca 35.5 46 0.001 28.7 3.3 54 159-212 425-482 (498)
282 cd07230 Pat_TGL4-5_like Triacy 35.3 20 0.00043 30.4 1.2 25 43-67 102-126 (421)
283 cd07228 Pat_NTE_like_bacteria 34.9 32 0.0007 24.9 2.1 22 43-64 29-50 (175)
284 cd07210 Pat_hypo_W_succinogene 34.1 33 0.00072 26.1 2.1 21 43-63 29-49 (221)
285 cd02189 delta_tubulin The tubu 33.6 1.1E+02 0.0024 26.2 5.4 34 20-55 106-139 (446)
286 COG4099 Predicted peptidase [G 33.5 21 0.00046 28.7 1.0 27 159-185 315-341 (387)
287 PRK03482 phosphoglycerate muta 33.5 1.7E+02 0.0036 22.0 5.9 39 17-59 120-158 (215)
288 cd07218 Pat_iPLA2 Calcium-inde 33.4 69 0.0015 24.9 3.8 20 45-64 33-52 (245)
289 PLN00222 tubulin gamma chain; 32.8 1.3E+02 0.0029 25.9 5.7 55 19-75 111-173 (454)
290 cd07213 Pat17_PNPLA8_PNPLA9_li 32.7 35 0.00076 27.2 2.1 18 45-62 37-54 (288)
291 cd07229 Pat_TGL3_like Triacylg 32.3 25 0.00054 29.5 1.3 27 43-69 112-138 (391)
292 COG0796 MurI Glutamate racemas 31.9 1.6E+02 0.0035 23.3 5.6 63 159-226 5-67 (269)
293 PF01734 Patatin: Patatin-like 31.9 38 0.00082 24.3 2.1 20 43-62 28-47 (204)
294 KOG2308 Phosphatidic acid-pref 31.6 36 0.00079 30.9 2.2 20 42-61 417-436 (741)
295 cd07224 Pat_like Patatin-like 31.6 81 0.0018 24.2 3.9 21 44-64 31-51 (233)
296 PF07578 LAB_N: Lipid A Biosyn 31.4 11 0.00023 23.1 -0.7 17 42-58 52-68 (72)
297 PHA02595 tk.4 hypothetical pro 31.4 33 0.00071 24.5 1.6 17 49-65 29-45 (154)
298 PF13124 DUF3963: Protein of u 31.0 76 0.0016 16.4 2.4 16 209-224 7-22 (40)
299 cd07205 Pat_PNPLA6_PNPLA7_NTE1 30.3 43 0.00094 24.2 2.2 20 43-62 29-48 (175)
300 PLN00220 tubulin beta chain; P 29.3 2.3E+02 0.005 24.3 6.6 54 20-75 110-171 (447)
301 cd07231 Pat_SDP1-like Sugar-De 29.1 26 0.00056 28.5 0.8 21 43-63 97-117 (323)
302 PRK10673 acyl-CoA esterase; Pr 28.8 2.4E+02 0.0052 21.2 6.3 63 159-225 16-78 (255)
303 PF08484 Methyltransf_14: C-me 28.8 2.2E+02 0.0049 20.4 5.7 47 25-75 56-102 (160)
304 cd07216 Pat17_PNPLA8_PNPLA9_li 28.4 36 0.00078 27.4 1.6 16 45-60 45-60 (309)
305 cd07206 Pat_TGL3-4-5_SDP1 Tria 28.2 39 0.00085 27.2 1.7 21 43-63 98-118 (298)
306 cd02190 epsilon_tubulin The tu 28.2 2.3E+02 0.005 23.7 6.3 34 20-55 79-112 (379)
307 COG1752 RssA Predicted esteras 27.6 50 0.0011 26.5 2.2 20 43-62 40-59 (306)
308 COG3621 Patatin [General funct 27.2 43 0.00093 27.4 1.7 20 45-64 45-64 (394)
309 TIGR00065 ftsZ cell division p 26.9 2.2E+02 0.0048 23.5 5.9 13 43-55 103-115 (349)
310 cd07204 Pat_PNPLA_like Patatin 26.6 55 0.0012 25.4 2.3 20 45-64 34-53 (243)
311 PF00448 SRP54: SRP54-type pro 26.3 45 0.00097 24.9 1.6 48 154-204 51-98 (196)
312 PF05576 Peptidase_S37: PS-10 26.3 38 0.00082 28.6 1.3 70 148-222 340-411 (448)
313 cd07199 Pat17_PNPLA8_PNPLA9_li 25.9 46 0.00099 25.9 1.7 18 45-62 37-54 (258)
314 PF12242 Eno-Rase_NADH_b: NAD( 25.7 1.8E+02 0.0038 18.2 4.8 39 26-64 23-62 (78)
315 PTZ00335 tubulin alpha chain; 25.4 2.8E+02 0.0061 23.8 6.4 55 20-76 112-174 (448)
316 COG0420 SbcD DNA repair exonuc 25.3 1E+02 0.0022 25.7 3.7 21 153-173 69-89 (390)
317 KOG2088 Predicted lipase/calmo 24.7 56 0.0012 29.2 2.1 21 40-60 250-270 (596)
318 PF10555 MraY_sig1: Phospho-N- 24.1 11 0.00025 14.7 -1.0 6 50-55 6-11 (13)
319 cd07222 Pat_PNPLA4 Patatin-lik 23.9 59 0.0013 25.2 2.0 21 45-66 34-54 (246)
320 PF02044 Bombesin: Bombesin-li 23.6 15 0.00033 14.5 -0.7 8 45-52 4-11 (14)
321 PRK13938 phosphoheptose isomer 23.6 1.8E+02 0.0039 21.7 4.4 24 41-64 45-68 (196)
322 PRK13690 hypothetical protein; 23.4 1.8E+02 0.0038 21.5 4.1 32 19-50 3-34 (184)
323 PRK00865 glutamate racemase; P 23.3 2.8E+02 0.0061 21.7 5.7 61 160-225 6-66 (261)
324 cd07214 Pat17_isozyme_like Pat 22.9 61 0.0013 26.7 1.9 18 45-62 46-63 (349)
325 COG2201 CheB Chemotaxis respon 22.9 1.2E+02 0.0027 25.0 3.6 28 42-69 157-185 (350)
326 COG4667 Predicted esterase of 22.6 49 0.0011 26.2 1.2 31 42-72 39-70 (292)
327 cd06149 ISG20 DEDDh 3'-5' exon 22.6 67 0.0015 22.9 1.9 24 17-51 62-85 (157)
328 COG0813 DeoD Purine-nucleoside 22.6 2E+02 0.0042 22.2 4.3 40 38-79 52-95 (236)
329 PTZ00387 epsilon tubulin; Prov 22.5 2.1E+02 0.0047 24.7 5.2 35 20-56 111-145 (465)
330 TIGR00067 glut_race glutamate 22.4 1.8E+02 0.0039 22.7 4.4 38 188-225 22-60 (251)
331 cd01714 ETF_beta The electron 22.3 2.1E+02 0.0045 21.4 4.6 39 18-63 92-134 (202)
332 PF05577 Peptidase_S28: Serine 22.1 86 0.0019 26.5 2.8 38 160-202 377-414 (434)
333 cd01819 Patatin_and_cPLA2 Pata 22.1 70 0.0015 22.7 1.9 18 43-60 29-46 (155)
334 TIGR02069 cyanophycinase cyano 21.6 3.6E+02 0.0078 21.1 5.9 35 164-198 3-37 (250)
335 KOG2182 Hydrolytic enzymes of 21.3 2.1E+02 0.0045 25.0 4.7 63 159-226 433-503 (514)
336 cd07215 Pat17_PNPLA8_PNPLA9_li 20.9 64 0.0014 26.3 1.7 17 45-61 43-59 (329)
337 TIGR03607 patatin-related prot 20.6 68 0.0015 29.5 1.9 17 45-61 69-85 (739)
338 cd02186 alpha_tubulin The tubu 20.5 4.9E+02 0.011 22.3 6.9 34 20-55 111-144 (434)
339 PRK14046 malate--CoA ligase su 20.5 82 0.0018 26.5 2.3 31 42-72 119-149 (392)
340 cd02187 beta_tubulin The tubul 20.4 2.3E+02 0.005 24.1 4.9 34 20-55 109-142 (425)
341 PLN00221 tubulin alpha chain; 20.3 3.1E+02 0.0068 23.6 5.7 34 20-55 112-145 (450)
342 PRK02399 hypothetical protein; 20.3 4E+02 0.0086 22.7 6.1 30 44-73 99-128 (406)
No 1
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=100.00 E-value=3.3e-47 Score=288.48 Aligned_cols=225 Identities=54% Similarity=0.931 Sum_probs=210.9
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|++|||+|+|..+++++|+.+++|+...++..+...+.++.|.||+||||||+|++.++.++|+.++|+|+++|++.+.
T Consensus 88 ~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~ 167 (313)
T KOG1455|consen 88 IDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKIS 167 (313)
T ss_pred eeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccC
Confidence 59999999999999999999999999999998877778889999999999999999999999999999999999999998
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCc
Q 026829 81 DDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSL 160 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~ 160 (232)
++..|+++...++..++.+.|+.+.++.++.....++++.++.....|..+|...++++++.++++...++.+.+.++++
T Consensus 168 ~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtv 247 (313)
T KOG1455|consen 168 EDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTV 247 (313)
T ss_pred CccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccc
Confidence 88888888888888999999999888888777888999998888888999999999999999999999999999999999
Q ss_pred cEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhh
Q 026829 161 PLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 225 (232)
Q Consensus 161 PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~ 225 (232)
|.+|+||++|.++++..++.+++.+.+.++++++|||+-|.++..++++.++.|+.+|++||+++
T Consensus 248 PflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 248 PFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99999999999999999999999998899999999999999998677778899999999999987
No 2
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=2.4e-37 Score=251.56 Aligned_cols=228 Identities=80% Similarity=1.235 Sum_probs=165.0
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|++..++..+++++++|+.++++.+....++.+.+++|+||||||+||+.++.++|++++|+||++|+....
T Consensus 121 ~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~ 200 (349)
T PLN02385 121 MDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIA 200 (349)
T ss_pred ecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEeccccccc
Confidence 69999999988766667999999999999888765333445589999999999999999999999999999999987654
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCc
Q 026829 81 DDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSL 160 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~ 160 (232)
....+++........+....+.....+...+....+++........++...+.....+..+..++....++...+.++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~ 280 (349)
T PLN02385 201 DDVVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSL 280 (349)
T ss_pred ccccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCC
Confidence 33333333333333333333332222222222222222222111222222333344556666666655566677899999
Q ss_pred cEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhhcc
Q 026829 161 PLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRS 228 (232)
Q Consensus 161 PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~~ 228 (232)
|+|+|||++|.++|+..++.+++.+..+++++++++++||.++.|+|+++.++++++|++||++++.+
T Consensus 281 P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~~ 348 (349)
T PLN02385 281 PLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHSTQ 348 (349)
T ss_pred CEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999888776567899999999999999999988888999999999998753
No 3
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3e-34 Score=231.86 Aligned_cols=229 Identities=44% Similarity=0.810 Sum_probs=155.8
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|++..++..+++.+++|+.++++.+.......+.|++|+||||||++|+.++.++|++|+++|+++|+....
T Consensus 93 ~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~ 172 (330)
T PLN02298 93 LDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKIS 172 (330)
T ss_pred ecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCC
Confidence 69999999987666666899999999999998875433445689999999999999999999999999999999976544
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCc
Q 026829 81 DDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSL 160 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~ 160 (232)
....+.+........+..+.+.....+....................+...|...+.+....+++.......+.+.++++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 252 (330)
T PLN02298 173 DKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSI 252 (330)
T ss_pred cccCCchHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCC
Confidence 32222222222222233333321111111000000000000001111112222223333334444444445677889999
Q ss_pred cEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhhccC
Q 026829 161 PLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRSS 229 (232)
Q Consensus 161 PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~~~ 229 (232)
|+|+|||++|.++|++.++.+++++..+++++++++|++|+++.++|+...+.+.+.+.+||+++...+
T Consensus 253 PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~ 321 (330)
T PLN02298 253 PFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGK 321 (330)
T ss_pred CEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 999999999999999999999888766678999999999999999998877889999999998876544
No 4
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=100.00 E-value=1.8e-31 Score=211.02 Aligned_cols=225 Identities=28% Similarity=0.383 Sum_probs=149.7
Q ss_pred CCCCCCCCCC-CcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccC
Q 026829 1 MDYPGFGLSA-GLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 79 (232)
Q Consensus 1 ~D~~G~G~S~-~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~ 79 (232)
+|+||||.|. +..+++.+|+++.+|+..+++..... .++.|++|+||||||.|++.++.+++.+++++||+||+...
T Consensus 67 ~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~--~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l 144 (298)
T COG2267 67 LDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEP--DPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGL 144 (298)
T ss_pred ecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhcc--CCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccC
Confidence 6999999998 78899889999999999888877542 34679999999999999999999999999999999999875
Q ss_pred CcCCCChHHHHHHHHHHHhhcCCCccCCC---CchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHH-HHHHhc
Q 026829 80 ADDMVPPFLVKQILIGIANILPKHKLVPQ---KDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTE-GIERRL 155 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~l 155 (232)
..................++.+......+ .-......+++........+..+....+........+...+ ......
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~ 224 (298)
T COG2267 145 GGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDA 224 (298)
T ss_pred ChhHHHHHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhcc
Confidence 42001111112122222333332221110 00011122222211111112211111122222222222222 223446
Q ss_pred CcCCccEEEEeeCCCCccC-hhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhhcc
Q 026829 156 EKVSLPLLILHGENDTVTD-PSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRS 228 (232)
Q Consensus 156 ~~i~~PvLii~G~~D~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~~ 228 (232)
..+++|||+++|++|.+++ .+....++++...+++++++|+|++|.+++|.+. ..+.+++.+.+||++....
T Consensus 225 ~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~-~r~~~~~~~~~~l~~~~~~ 297 (298)
T COG2267 225 PAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDR-AREEVLKDILAWLAEALPS 297 (298)
T ss_pred ccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcch-HHHHHHHHHHHHHHhhccC
Confidence 6789999999999999999 7888888888888889999999999999997654 3478999999999987654
No 5
>PHA02857 monoglyceride lipase; Provisional
Probab=99.98 E-value=3e-30 Score=203.54 Aligned_cols=216 Identities=26% Similarity=0.467 Sum_probs=138.9
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|++......++.++++|+++.+..++.. .+..|++|+||||||+||+.+|.++|++++++|+++|+....
T Consensus 58 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~--~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~ 135 (276)
T PHA02857 58 HDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKST--YPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAE 135 (276)
T ss_pred ccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhh--CCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccc
Confidence 699999999865444568888999998888776532 334579999999999999999999999999999999975421
Q ss_pred cCCCChHHHHHHHHHHHh-hcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCC
Q 026829 81 DDMVPPFLVKQILIGIAN-ILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVS 159 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~ 159 (232)
..+ ........... ..+. ..... ........+........++...............+........+.+.+++
T Consensus 136 --~~~--~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 209 (276)
T PHA02857 136 --AVP--RLNLLAAKLMGIFYPN-KIVGK-LCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIK 209 (276)
T ss_pred --ccc--HHHHHHHHHHHHhCCC-CccCC-CCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCC
Confidence 111 11111111111 1111 11100 00000111110000000111111111111222333333345567788999
Q ss_pred ccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhh
Q 026829 160 LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 226 (232)
Q Consensus 160 ~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~ 226 (232)
+|||++||++|.++|++.+..+.+.+.. ++++++++++||.++.|.++ ..++++++|++||+++.
T Consensus 210 ~Pvliv~G~~D~i~~~~~~~~l~~~~~~-~~~~~~~~~~gH~~~~e~~~-~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 210 TPILILQGTNNEISDVSGAYYFMQHANC-NREIKIYEGAKHHLHKETDE-VKKSVMKEIETWIFNRV 274 (276)
T ss_pred CCEEEEecCCCCcCChHHHHHHHHHccC-CceEEEeCCCcccccCCchh-HHHHHHHHHHHHHHHhc
Confidence 9999999999999999999988877643 68999999999999998774 46789999999999863
No 6
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.97 E-value=5.2e-29 Score=200.82 Aligned_cols=216 Identities=24% Similarity=0.394 Sum_probs=143.0
Q ss_pred CCCCCCCCCCCc---ccccccHHHHHHHHHHHHHhhhcC-----------------CCCC-CCCeEEEecccchHHHHHH
Q 026829 1 MDYPGFGLSAGL---HGYIPSFDRLVDDVIEHYSNIKEY-----------------PEFR-TLPSFLFGQSLGGAVALKV 59 (232)
Q Consensus 1 ~D~~G~G~S~~~---~~~~~~~~~~~~d~~~~~~~l~~~-----------------~~~~-~~~~~lvGhSmGg~ia~~~ 59 (232)
+|+||||+|++. .+++.+|+++++|+.++++.+++. ..++ +.|++|+||||||+|++.+
T Consensus 80 ~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~ 159 (332)
T TIGR01607 80 LDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRL 159 (332)
T ss_pred ecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHH
Confidence 599999999864 455669999999999998876531 0234 6799999999999999999
Q ss_pred HhhCCC--------ceeEEEEcCccccCCcCCCC-----hHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhc
Q 026829 60 HLKQPN--------AWSGAILVAPMCKIADDMVP-----PFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTK 126 (232)
Q Consensus 60 a~~~p~--------~v~~lil~ap~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (232)
+.+.++ .++|+|+++|+..+.....+ +......+..+..+.+........ ....++.......
T Consensus 160 ~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~ 235 (332)
T TIGR01607 160 LELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKI----RYEKSPYVNDIIK 235 (332)
T ss_pred HHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCcc----ccccChhhhhHHh
Confidence 876542 58999999998643211100 111122222333444432211100 1111121111111
Q ss_pred ccccccCCcccHHHHHHHHHHHHHHHHhcCcC--CccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCcccccc
Q 026829 127 YNVIVYKDKPRLRTALELLKTTEGIERRLEKV--SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE 204 (232)
Q Consensus 127 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i--~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 204 (232)
.+...+....+.+...+++.....+.+.+..+ ++|+|+|+|++|.+++++.++.+++++..+++++++++|++|++++
T Consensus 236 ~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~ 315 (332)
T TIGR01607 236 FDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITI 315 (332)
T ss_pred cCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCcc
Confidence 23333333344566666666655555556666 7999999999999999999998888766668899999999999999
Q ss_pred CCChhHHHHHHHHHHHHHH
Q 026829 205 GEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 205 e~~~~~~~~~~~~i~~~l~ 223 (232)
|.. .++++++|++||+
T Consensus 316 E~~---~~~v~~~i~~wL~ 331 (332)
T TIGR01607 316 EPG---NEEVLKKIIEWIS 331 (332)
T ss_pred CCC---HHHHHHHHHHHhh
Confidence 743 2468999999986
No 7
>PRK10749 lysophospholipase L2; Provisional
Probab=99.97 E-value=1.5e-28 Score=198.41 Aligned_cols=221 Identities=19% Similarity=0.277 Sum_probs=136.7
Q ss_pred CCCCCCCCCCCc-----ccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCc
Q 026829 1 MDYPGFGLSAGL-----HGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAP 75 (232)
Q Consensus 1 ~D~~G~G~S~~~-----~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap 75 (232)
+|+||||.|++. .+...+++++++|+.++++.+... .+..|++++||||||.||+.++.++|+.++++|+++|
T Consensus 87 ~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p 164 (330)
T PRK10749 87 IDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQP--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAP 164 (330)
T ss_pred EcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhc--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECc
Confidence 699999999753 234458999999999988776432 2345899999999999999999999999999999999
Q ss_pred cccCCcCCCChHHHHHHHHHHHhh---cCCCcc-----CCCCchhhHhhcCchhh-h-hhc--ccccccCCcccHHHHHH
Q 026829 76 MCKIADDMVPPFLVKQILIGIANI---LPKHKL-----VPQKDLAEAAFRDLKNR-E-LTK--YNVIVYKDKPRLRTALE 143 (232)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~~~~-~-~~~--~~~~~~~~~~~l~~~~~ 143 (232)
+....... +.............. ...... .+..........+.... . ... .+.........++....
T Consensus 165 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (330)
T PRK10749 165 MFGIVLPL-PSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRE 243 (330)
T ss_pred hhccCCCC-CcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHH
Confidence 86543221 222212111111111 000000 00000000000000000 0 000 00000000112233333
Q ss_pred HHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcC-----CCccEEEcCCCccccccCCChhHHHHHHHHH
Q 026829 144 LLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASS-----KDKKCILYKDAFHSLLEGEPDDMIIRVFADI 218 (232)
Q Consensus 144 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i 218 (232)
.+.....+...+.++++|+|+|||++|++++++.++.+++.+.. +++++++++|+||++++|.++. .++++++|
T Consensus 244 ~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~-r~~v~~~i 322 (330)
T PRK10749 244 SILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAM-RSVALNAI 322 (330)
T ss_pred HHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHH-HHHHHHHH
Confidence 33333344567888999999999999999999988888776531 4568999999999999987653 56799999
Q ss_pred HHHHHhh
Q 026829 219 ISWLDDH 225 (232)
Q Consensus 219 ~~~l~~~ 225 (232)
++||+++
T Consensus 323 ~~fl~~~ 329 (330)
T PRK10749 323 VDFFNRH 329 (330)
T ss_pred HHHHhhc
Confidence 9999875
No 8
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=1.5e-28 Score=201.43 Aligned_cols=222 Identities=32% Similarity=0.530 Sum_probs=143.4
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCC---ceeEEEEcCccc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN---AWSGAILVAPMC 77 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~---~v~~lil~ap~~ 77 (232)
+|+||||.|++..++..+++.+++|+.++++.+... .++.|++|+||||||.+++.++. +|+ +++++|+.+|..
T Consensus 169 ~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~--~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 169 MDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSE--NPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred eCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHh--CCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECccc
Confidence 699999999987666678999999999988887642 23458999999999999998764 564 799999999986
Q ss_pred cCCcCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCc
Q 026829 78 KIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEK 157 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 157 (232)
..... ++. .......+....+...............+++........+...+...........++.....+.+.+.+
T Consensus 246 ~~~~~--~~~-~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~ 322 (395)
T PLN02652 246 RVKPA--HPI-VGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKS 322 (395)
T ss_pred ccccc--hHH-HHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhccc
Confidence 53221 111 111111122222221110000000000111110000001111122122233444444444455678899
Q ss_pred CCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhhccCCC
Q 026829 158 VSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRSSTD 231 (232)
Q Consensus 158 i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~~~~~ 231 (232)
+++|+|++||++|.++|++.++.+++++...++++++++|++|.++.|. + .+++++.+.+||..+.+....
T Consensus 323 I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~-~--~e~v~~~I~~FL~~~~~~~~~ 393 (395)
T PLN02652 323 VTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEP-E--REEVGRDIIDWMEKRLDLVNG 393 (395)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCC-C--HHHHHHHHHHHHHHHhhcccC
Confidence 9999999999999999999999998886656789999999999998862 2 245889999999998876654
No 9
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=2.7e-27 Score=188.40 Aligned_cols=213 Identities=20% Similarity=0.271 Sum_probs=124.4
Q ss_pred CCCCCCCCCCCcc------cccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcC
Q 026829 1 MDYPGFGLSAGLH------GYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVA 74 (232)
Q Consensus 1 ~D~~G~G~S~~~~------~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~a 74 (232)
+|+||||.|+.+. ....+++++++++.++++.+.. .+++|+||||||+||+.+|.++|++|+++|+++
T Consensus 61 ~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~------~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~ 134 (294)
T PLN02824 61 IDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVG------DPAFVICNSVGGVVGLQAAVDAPELVRGVMLIN 134 (294)
T ss_pred EcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcC------CCeEEEEeCHHHHHHHHHHHhChhheeEEEEEC
Confidence 6999999998643 1345899999999999887632 378999999999999999999999999999999
Q ss_pred ccccCCcCCCChHHHHHHHHHHHhhcCCCc----c---CCCCchhhHh----hcCchhh--hhhcccccccCCcccHHHH
Q 026829 75 PMCKIADDMVPPFLVKQILIGIANILPKHK----L---VPQKDLAEAA----FRDLKNR--ELTKYNVIVYKDKPRLRTA 141 (232)
Q Consensus 75 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~l~~~ 141 (232)
|..........+.........+........ . .......... +.+.... ...................
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (294)
T PLN02824 135 ISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVF 214 (294)
T ss_pred CCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHH
Confidence 864311100001111111111111000000 0 0000000000 0000000 0000000000000011111
Q ss_pred HHHHHH--HHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHH
Q 026829 142 LELLKT--TEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADII 219 (232)
Q Consensus 142 ~~~~~~--~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~ 219 (232)
..++.. .......+.++++|||+|+|++|.++|.+.++.+.+. .+++++++++++||+++.|+|++ +.+.|.
T Consensus 215 ~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~--~~~~~~~~i~~~gH~~~~e~p~~----~~~~i~ 288 (294)
T PLN02824 215 LDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANF--DAVEDFIVLPGVGHCPQDEAPEL----VNPLIE 288 (294)
T ss_pred HHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhc--CCccceEEeCCCCCChhhhCHHH----HHHHHH
Confidence 122110 0112345788999999999999999999888775443 24679999999999999999986 677888
Q ss_pred HHHHhh
Q 026829 220 SWLDDH 225 (232)
Q Consensus 220 ~~l~~~ 225 (232)
+|++++
T Consensus 289 ~fl~~~ 294 (294)
T PLN02824 289 SFVARH 294 (294)
T ss_pred HHHhcC
Confidence 888754
No 10
>PLN02965 Probable pheophorbidase
Probab=99.95 E-value=1.4e-26 Score=180.57 Aligned_cols=207 Identities=17% Similarity=0.225 Sum_probs=121.3
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|+.......+++++++|+.++++.+.. ..+++|+||||||.|++.++.++|++|+++|++++.....
T Consensus 36 ~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~-----~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~ 110 (255)
T PLN02965 36 VDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPP-----DHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKP 110 (255)
T ss_pred ecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCC-----CCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCC
Confidence 69999999976544345899999999999886521 1379999999999999999999999999999998753211
Q ss_pred cCCCChHHHHHHHHHHHhhc----CCCccCCCC--c----hh-hHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHH
Q 026829 81 DDMVPPFLVKQILIGIANIL----PKHKLVPQK--D----LA-EAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTE 149 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 149 (232)
....... ..+......... ......+.. . .. ..++.+... ....... ........+. +....
T Consensus 111 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~----~~~~~ 183 (255)
T PLN02965 111 GSIISPR-LKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPL-EDYTLSS-KLLRPAPVRA----FQDLD 183 (255)
T ss_pred CCCccHH-HHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCH-HHHHHHH-HhcCCCCCcc----hhhhh
Confidence 1110011 111000000000 000000000 0 00 000111000 0000000 0000000000 00111
Q ss_pred HHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhh
Q 026829 150 GIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 225 (232)
Q Consensus 150 ~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~ 225 (232)
+....+..+++|+|+|+|++|.++|+..++.+.+.+ ++.++++++++||+++.|+|++ +.+.+.+|+.+.
T Consensus 184 ~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~--~~a~~~~i~~~GH~~~~e~p~~----v~~~l~~~~~~~ 253 (255)
T PLN02965 184 KLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENW--PPAQTYVLEDSDHSAFFSVPTT----LFQYLLQAVSSL 253 (255)
T ss_pred hccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhC--CcceEEEecCCCCchhhcCHHH----HHHHHHHHHHHh
Confidence 222345678999999999999999999888887765 4789999999999999999987 455566665543
No 11
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.94 E-value=2.8e-26 Score=180.99 Aligned_cols=206 Identities=17% Similarity=0.156 Sum_probs=123.6
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|+.+.. ..+++++++++.++++.+.. .+++|+||||||+||+++|.++|++|+++||++|.....
T Consensus 57 ~Dl~G~G~S~~~~~-~~~~~~~~~~~~~~i~~l~~------~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~ 129 (276)
T TIGR02240 57 FDVPGVGGSSTPRH-PYRFPGLAKLAARMLDYLDY------GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAV 129 (276)
T ss_pred ECCCCCCCCCCCCC-cCcHHHHHHHHHHHHHHhCc------CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccc
Confidence 69999999986533 34889999999888887632 268999999999999999999999999999999875421
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhc-----CchhhhhhcccccccCCcccHHHHHHHHHHH-HHHHHh
Q 026829 81 DDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFR-----DLKNRELTKYNVIVYKDKPRLRTALELLKTT-EGIERR 154 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~ 154 (232)
.....+..... ......... .. . ........+. ++....... .. ................. ....+.
T Consensus 130 ~~~~~~~~~~~-~~~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~ 202 (276)
T TIGR02240 130 MVPGKPKVLMM-MASPRRYIQ-PS-H-GIHIAPDIYGGAFRRDPELAMAHA-SK--VRSGGKLGYYWQLFAGLGWTSIHW 202 (276)
T ss_pred cCCCchhHHHH-hcCchhhhc-cc-c-ccchhhhhccceeeccchhhhhhh-hh--cccCCCchHHHHHHHHcCCchhhH
Confidence 11100111000 000000000 00 0 0000000010 000000000 00 00001111111111111 112245
Q ss_pred cCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhhc
Q 026829 155 LEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSR 227 (232)
Q Consensus 155 l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~ 227 (232)
+.++++|+|+|+|++|+++|++.++.+.+.+ ++++++++++ ||+++.|+|++ +.+.|.+|+++...
T Consensus 203 l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~--~~~~~~~i~~-gH~~~~e~p~~----~~~~i~~fl~~~~~ 268 (276)
T TIGR02240 203 LHKIQQPTLVLAGDDDPIIPLINMRLLAWRI--PNAELHIIDD-GHLFLITRAEA----VAPIIMKFLAEERQ 268 (276)
T ss_pred hhcCCCCEEEEEeCCCCcCCHHHHHHHHHhC--CCCEEEEEcC-CCchhhccHHH----HHHHHHHHHHHhhh
Confidence 7889999999999999999999888887765 4789999986 99999998875 66778888876543
No 12
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.94 E-value=6.4e-26 Score=180.54 Aligned_cols=214 Identities=15% Similarity=0.261 Sum_probs=124.2
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|+.+... ++++++++|+.++++.+.. .+++|+||||||.||+.++.++|++|+++|+++|.....
T Consensus 59 ~D~~G~G~S~~~~~~-~~~~~~a~dl~~ll~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~ 131 (295)
T PRK03592 59 PDLIGMGASDKPDID-YTFADHARYLDAWFDALGL------DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPM 131 (295)
T ss_pred EcCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHhCC------CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCc
Confidence 699999999865432 4889999999988887632 379999999999999999999999999999999854321
Q ss_pred c-CCCChHHHHHHHHHHHhhcCCCccC-CCCchhhHhhcCch-----hhhhhcccccccCCcccHHHHH-----------
Q 026829 81 D-DMVPPFLVKQILIGIANILPKHKLV-PQKDLAEAAFRDLK-----NRELTKYNVIVYKDKPRLRTAL----------- 142 (232)
Q Consensus 81 ~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~----------- 142 (232)
. ...+... ......+.......... ....+....+.... ......+. ..+..........
T Consensus 132 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 209 (295)
T PRK03592 132 TWDDFPPAV-RELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYR-RPFPTPESRRPTLSWPRELPIDGE 209 (295)
T ss_pred chhhcchhH-HHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHH-hhcCCchhhhhhhhhhhhcCCCCc
Confidence 1 0011111 11111111000000000 00000000000000 00000000 0000000000000
Q ss_pred --HHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHH
Q 026829 143 --ELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIIS 220 (232)
Q Consensus 143 --~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~ 220 (232)
.......+....+.++++|||+|||++|.++++.....+.... .++.++++++++||+++.|+|++ +.+.|.+
T Consensus 210 ~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~----v~~~i~~ 284 (295)
T PRK03592 210 PADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSW-PNQLEITVFGAGLHFAQEDSPEE----IGAAIAA 284 (295)
T ss_pred chhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHh-hhhcceeeccCcchhhhhcCHHH----HHHHHHH
Confidence 0111112334567889999999999999999555554554432 24789999999999999999875 6778889
Q ss_pred HHHhhhcc
Q 026829 221 WLDDHSRS 228 (232)
Q Consensus 221 ~l~~~~~~ 228 (232)
|+.+..+.
T Consensus 285 fl~~~~~~ 292 (295)
T PRK03592 285 WLRRLRLA 292 (295)
T ss_pred HHHHhccc
Confidence 99876654
No 13
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.94 E-value=5.3e-26 Score=177.46 Aligned_cols=202 Identities=23% Similarity=0.324 Sum_probs=114.1
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|+.... .+++++++++.+.. ..+++|+||||||.||+.+|.++|++|+++|+++|.....
T Consensus 45 ~Dl~G~G~S~~~~~--~~~~~~~~~l~~~~----------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~ 112 (256)
T PRK10349 45 VDLPGFGRSRGFGA--LSLADMAEAVLQQA----------PDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFS 112 (256)
T ss_pred ecCCCCCCCCCCCC--CCHHHHHHHHHhcC----------CCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCcccee
Confidence 69999999986432 47788877765321 1368999999999999999999999999999998754321
Q ss_pred cC-CCChHHHHHHHHHHHhhcCC-CccCCCCchhhHhhcCch-hh---hhhc-ccccccCCcccHHHHHHHHHHHHHHHH
Q 026829 81 DD-MVPPFLVKQILIGIANILPK-HKLVPQKDLAEAAFRDLK-NR---ELTK-YNVIVYKDKPRLRTALELLKTTEGIER 153 (232)
Q Consensus 81 ~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~---~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~ 153 (232)
.. ..+.. .......+...... ........+....+.... .. .... ...........+......+.. .+..+
T Consensus 113 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 190 (256)
T PRK10349 113 ARDEWPGI-KPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILKT-VDLRQ 190 (256)
T ss_pred cCCCCCcc-cHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHh-CccHH
Confidence 11 11100 00000000000000 000000000000000000 00 0000 000000000111112222221 13456
Q ss_pred hcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHH
Q 026829 154 RLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWL 222 (232)
Q Consensus 154 ~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l 222 (232)
.+.++++|||+|+|++|.++|.+.++.+.+.+ +++++++++++||+++.|+|+. +.+.+.+|-
T Consensus 191 ~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i--~~~~~~~i~~~gH~~~~e~p~~----f~~~l~~~~ 253 (256)
T PRK10349 191 PLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLW--PHSESYIFAKAAHAPFISHPAE----FCHLLVALK 253 (256)
T ss_pred HHhhcCCCeEEEecCCCccCCHHHHHHHHHhC--CCCeEEEeCCCCCCccccCHHH----HHHHHHHHh
Confidence 78889999999999999999988877665554 5889999999999999999986 445555553
No 14
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.93 E-value=5.7e-25 Score=175.67 Aligned_cols=209 Identities=17% Similarity=0.211 Sum_probs=118.6
Q ss_pred CCCCCCCCCCCccc-ccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccC
Q 026829 1 MDYPGFGLSAGLHG-YIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 79 (232)
Q Consensus 1 ~D~~G~G~S~~~~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~ 79 (232)
+|+||||.|+.+.. ...+++++++++.++++.+. ..+++|+||||||.+|+.+|.++|++|+++|+++|....
T Consensus 79 ~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~------~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 152 (302)
T PRK00870 79 PDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLD------LTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPT 152 (302)
T ss_pred ECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcC------CCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCC
Confidence 69999999976432 23588999999998887653 136899999999999999999999999999999875321
Q ss_pred CcCCCChHHHHHHHHHHHhhcCCC---ccC---CCCchhhH---hhcCchhhhhhccccccc---CCcccHHHHHHHHHH
Q 026829 80 ADDMVPPFLVKQILIGIANILPKH---KLV---PQKDLAEA---AFRDLKNRELTKYNVIVY---KDKPRLRTALELLKT 147 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~ 147 (232)
.....+.. ...... .....+.. ... ....+... .+...............+ ........ ....
T Consensus 153 ~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 227 (302)
T PRK00870 153 GDGPMPDA-FWAWRA-FSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDP---AVAA 227 (302)
T ss_pred ccccchHH-Hhhhhc-ccccCchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCc---chHH
Confidence 11100110 000000 00000000 000 00000000 000000000000000000 00000000 0001
Q ss_pred HHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCC-CccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhh
Q 026829 148 TEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSK-DKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 225 (232)
Q Consensus 148 ~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~ 225 (232)
.......+.++++|+|+|||++|+++|+.. +.+.+.++.. .+++++++++||+++.|+|++ +.+.+.+|+.++
T Consensus 228 ~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~----~~~~l~~fl~~~ 301 (302)
T PRK00870 228 NRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEE----LAEAVLEFIRAT 301 (302)
T ss_pred HHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHH----HHHHHHHHHhcC
Confidence 112335678899999999999999998765 6666555321 123889999999999999875 677888998764
No 15
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=2.5e-25 Score=181.54 Aligned_cols=213 Identities=18% Similarity=0.309 Sum_probs=119.9
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHh-hCCCceeEEEEcCccccC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHL-KQPNAWSGAILVAPMCKI 79 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~-~~p~~v~~lil~ap~~~~ 79 (232)
+|+||||.|+.+.+...+++++++++.++++.+.. .+++|+||||||.|++.++. .+|++|+++||++|....
T Consensus 120 ~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~------~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~ 193 (360)
T PLN02679 120 IDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQ------KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGM 193 (360)
T ss_pred ECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcC------CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCcccc
Confidence 69999999987544345889999999998886532 37899999999999999887 479999999999986432
Q ss_pred CcCC-CChHHHHH---HHHHHHhhcCCCc-------cCCCCchhhH----hhcCchhhhhhccccc--ccCCcccHHHHH
Q 026829 80 ADDM-VPPFLVKQ---ILIGIANILPKHK-------LVPQKDLAEA----AFRDLKNRELTKYNVI--VYKDKPRLRTAL 142 (232)
Q Consensus 80 ~~~~-~~~~~~~~---~~~~~~~~~~~~~-------~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~l~~~~ 142 (232)
.... ...+.... ....+..+..... .......... .+.+............ .......+....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (360)
T PLN02679 194 NNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFV 273 (360)
T ss_pred ccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHH
Confidence 1110 01110000 0000000000000 0000000000 0000000000000000 000001111111
Q ss_pred HHHHH--HHHHHHhcCcCCccEEEEeeCCCCccChhHH-----HHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHH
Q 026829 143 ELLKT--TEGIERRLEKVSLPLLILHGENDTVTDPSVS-----KALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVF 215 (232)
Q Consensus 143 ~~~~~--~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~ 215 (232)
.+... ..+....+.++++|||+|||++|.++|++.. ..+.+. .++.++++++++||+++.|+|++ ++
T Consensus 274 ~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~--ip~~~l~~i~~aGH~~~~E~Pe~----~~ 347 (360)
T PLN02679 274 SIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQ--LPNVTLYVLEGVGHCPHDDRPDL----VH 347 (360)
T ss_pred HHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhcc--CCceEEEEcCCCCCCccccCHHH----HH
Confidence 11110 0112345778999999999999999987632 122222 35789999999999999999875 77
Q ss_pred HHHHHHHHhh
Q 026829 216 ADIISWLDDH 225 (232)
Q Consensus 216 ~~i~~~l~~~ 225 (232)
+.|.+||++.
T Consensus 348 ~~I~~FL~~~ 357 (360)
T PLN02679 348 EKLLPWLAQL 357 (360)
T ss_pred HHHHHHHHhc
Confidence 7888999763
No 16
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.92 E-value=3.6e-24 Score=178.16 Aligned_cols=205 Identities=16% Similarity=0.204 Sum_probs=116.5
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHH-HHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVI-EHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 79 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~-~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~ 79 (232)
+|+||||.|+.+....++++++++++. .+++.+. ..+++|+||||||+||+.+|.++|++|+++||++|....
T Consensus 238 ~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg------~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~ 311 (481)
T PLN03087 238 VDLLGFGRSPKPADSLYTLREHLEMIERSVLERYK------VKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYP 311 (481)
T ss_pred ECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcC------CCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccc
Confidence 699999999865444468899998884 5555432 237899999999999999999999999999999986542
Q ss_pred CcCCCChHHHHHHHHHHHhhcCCC--ccCCCCchhhHhhc---C---------ch-hhh---h-hcccc--------ccc
Q 026829 80 ADDMVPPFLVKQILIGIANILPKH--KLVPQKDLAEAAFR---D---------LK-NRE---L-TKYNV--------IVY 132 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~---------~~-~~~---~-~~~~~--------~~~ 132 (232)
....... .... .....+.. ............+. . .. ... . ..... ...
T Consensus 312 ~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~ 386 (481)
T PLN03087 312 VPKGVQA--TQYV---MRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCH 386 (481)
T ss_pred cccchhH--HHHH---HHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhc
Confidence 2111100 0000 00000000 00000000000000 0 00 000 0 00000 000
Q ss_pred CCcccHHHHHHHHHH----H-HHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCcccccc-CC
Q 026829 133 KDKPRLRTALELLKT----T-EGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE-GE 206 (232)
Q Consensus 133 ~~~~~l~~~~~~~~~----~-~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~-e~ 206 (232)
...........+... . ..+...+.+|++|||+|||++|.++|++.++.+.+.+ ++.++++++++||.++. |+
T Consensus 387 ~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~i--P~a~l~vI~~aGH~~~v~e~ 464 (481)
T PLN03087 387 THNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKV--PRARVKVIDDKDHITIVVGR 464 (481)
T ss_pred cchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhC--CCCEEEEeCCCCCcchhhcC
Confidence 000000000001100 0 1122233468999999999999999999988887765 58999999999999885 88
Q ss_pred ChhHHHHHHHHHHHHH
Q 026829 207 PDDMIIRVFADIISWL 222 (232)
Q Consensus 207 ~~~~~~~~~~~i~~~l 222 (232)
|+. +.+.+.+|.
T Consensus 465 p~~----fa~~L~~F~ 476 (481)
T PLN03087 465 QKE----FARELEEIW 476 (481)
T ss_pred HHH----HHHHHHHHh
Confidence 875 455566665
No 17
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.92 E-value=1.6e-24 Score=171.62 Aligned_cols=203 Identities=20% Similarity=0.282 Sum_probs=112.7
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|+.+.....+++++++++.++++.+. ..+++++||||||.||+.++.++|++|+++|++++.....
T Consensus 66 ~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~ 139 (286)
T PRK03204 66 PDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLG------LDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPA 139 (286)
T ss_pred ECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhC------CCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCC
Confidence 6999999998654333478888888887776542 2368999999999999999999999999999988753211
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCc-cCCCCchhhHhhcCch-----hhhhhcccccccCCcccHHHHHHHH-H-------
Q 026829 81 DDMVPPFLVKQILIGIANILPKHK-LVPQKDLAEAAFRDLK-----NRELTKYNVIVYKDKPRLRTALELL-K------- 146 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~-~------- 146 (232)
........... ... .+... ......+....+.... ......+. .....+..+.....+ .
T Consensus 140 -~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 212 (286)
T PRK03204 140 -DTLAMKAFSRV---MSS-PPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYR--AVQPNAAARRGVAEMPKQILAARP 212 (286)
T ss_pred -CchhHHHHHHH---hcc-ccchhhhhhhhHHHHHhccccccCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHhcchhhH
Confidence 11000000000 000 00000 0000000000000000 00000000 000001111111100 0
Q ss_pred HHHHHHHhcCc--CCccEEEEeeCCCCccChh-HHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHH
Q 026829 147 TTEGIERRLEK--VSLPLLILHGENDTVTDPS-VSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWL 222 (232)
Q Consensus 147 ~~~~~~~~l~~--i~~PvLii~G~~D~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l 222 (232)
...++...+.. +++|||+|||++|.++++. ..+.+.+.+ ++.++++++++||+++.|+|++ +.+.|.+||
T Consensus 213 ~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~i--p~~~~~~i~~aGH~~~~e~Pe~----~~~~i~~~~ 285 (286)
T PRK03204 213 LLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATF--PDHVLVELPNAKHFIQEDAPDR----IAAAIIERF 285 (286)
T ss_pred HHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhc--CCCeEEEcCCCcccccccCHHH----HHHHHHHhc
Confidence 01111111222 2899999999999998665 445555544 5789999999999999999986 666777776
No 18
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.92 E-value=4.2e-24 Score=166.45 Aligned_cols=203 Identities=15% Similarity=0.198 Sum_probs=119.6
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|..... .+++++++|+.+.++.+.. .+++|+||||||++|+.+|.++|++|+++|++++.....
T Consensus 48 ~D~~G~G~s~~~~~--~~~~~~~~d~~~~l~~l~~------~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~ 119 (255)
T PRK10673 48 VDMRNHGLSPRDPV--MNYPAMAQDLLDTLDALQI------EKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDY 119 (255)
T ss_pred ECCCCCCCCCCCCC--CCHHHHHHHHHHHHHHcCC------CceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCc
Confidence 69999999986543 3899999999999887532 368999999999999999999999999999986532211
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhh-hhhcccccccCCc---ccHHHHHHHHHHHHHHHHhcC
Q 026829 81 DDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNR-ELTKYNVIVYKDK---PRLRTALELLKTTEGIERRLE 156 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~l~ 156 (232)
. .... ......+...... ...... .....+...... ....+....+... .........+... ...+.+.
T Consensus 120 ~---~~~~-~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 192 (255)
T PRK10673 120 H---VRRH-DEIFAAINAVSEA-GATTRQ-QAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHI-VGWEKIP 192 (255)
T ss_pred c---chhh-HHHHHHHHHhhhc-ccccHH-HHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHH-hCCcccC
Confidence 0 0000 0011111110000 000000 000000000000 0000000000000 0011111111100 0113466
Q ss_pred cCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHh
Q 026829 157 KVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 224 (232)
Q Consensus 157 ~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~ 224 (232)
.+++|+|+|+|++|..++++..+.+.+.+ ++.++++++++||.++.|+|++ +.+.+.+||.+
T Consensus 193 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~----~~~~l~~fl~~ 254 (255)
T PRK10673 193 AWPHPALFIRGGNSPYVTEAYRDDLLAQF--PQARAHVIAGAGHWVHAEKPDA----VLRAIRRYLND 254 (255)
T ss_pred CCCCCeEEEECCCCCCCCHHHHHHHHHhC--CCcEEEEeCCCCCeeeccCHHH----HHHHHHHHHhc
Confidence 78999999999999999988887776654 5789999999999999998875 66778888875
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.92 E-value=2.4e-24 Score=167.27 Aligned_cols=207 Identities=16% Similarity=0.206 Sum_probs=122.1
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|........+++++++++.+.++.+.. .+++++||||||++|+.++.++|++++++|+++++....
T Consensus 45 ~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~ 118 (257)
T TIGR03611 45 YDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNI------ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPD 118 (257)
T ss_pred EcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCC------CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCC
Confidence 69999999986544445889999999888876532 368999999999999999999999999999998764321
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCccCC-CCc--hhhHhhcCch-h-hhhhcccccccCCcccHHHHHHHHHHHHHHHHhc
Q 026829 81 DDMVPPFLVKQILIGIANILPKHKLVP-QKD--LAEAAFRDLK-N-RELTKYNVIVYKDKPRLRTALELLKTTEGIERRL 155 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l 155 (232)
... ..........+..... ..... ... .......... . ..........+.....+......+.. .+....+
T Consensus 119 ~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 194 (257)
T TIGR03611 119 PHT--RRCFDVRIALLQHAGP-EAYVHAQALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEA-FDVSARL 194 (257)
T ss_pred hhH--HHHHHHHHHHHhccCc-chhhhhhhhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHc-CCcHHHh
Confidence 100 0000000001110000 00000 000 0000000000 0 00000000001000011101111111 1233567
Q ss_pred CcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 156 EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 156 ~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
.++++|+|+++|++|.++|++.+..+.+.+ ++.+++.++++||.++.|+|++ +.+.+.+||+
T Consensus 195 ~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~----~~~~i~~fl~ 256 (257)
T TIGR03611 195 DRIQHPVLLIANRDDMLVPYTQSLRLAAAL--PNAQLKLLPYGGHASNVTDPET----FNRALLDFLK 256 (257)
T ss_pred cccCccEEEEecCcCcccCHHHHHHHHHhc--CCceEEEECCCCCCccccCHHH----HHHHHHHHhc
Confidence 788999999999999999999888877664 4778999999999999988875 6667778875
No 20
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.92 E-value=3.2e-24 Score=169.58 Aligned_cols=206 Identities=18% Similarity=0.154 Sum_probs=115.9
Q ss_pred CCCCCCCCCCCccc-ccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccC
Q 026829 1 MDYPGFGLSAGLHG-YIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 79 (232)
Q Consensus 1 ~D~~G~G~S~~~~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~ 79 (232)
+|+||||.|+.... ...++ .+++++.++++.+.. .+++++||||||+++++++.++|++++++|+++|....
T Consensus 66 ~D~~G~G~S~~~~~~~~~~~-~~~~~l~~~l~~l~~------~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 138 (282)
T TIGR03343 66 KDSPGFNKSDAVVMDEQRGL-VNARAVKGLMDALDI------EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLG 138 (282)
T ss_pred ECCCCCCCCCCCcCcccccc-hhHHHHHHHHHHcCC------CCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCC
Confidence 69999999986421 11122 456777777766532 36899999999999999999999999999999875321
Q ss_pred CcC--CCChHHHHHHHHHHHhhcCCCccCCCCchhhHh-hcCchhhhhhccc-cccc-CCcccHHHHHHHH----HHHHH
Q 026829 80 ADD--MVPPFLVKQILIGIANILPKHKLVPQKDLAEAA-FRDLKNRELTKYN-VIVY-KDKPRLRTALELL----KTTEG 150 (232)
Q Consensus 80 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~-~~~~~l~~~~~~~----~~~~~ 150 (232)
... ..+........ .................. +............ .... ..+.......... ....+
T Consensus 139 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (282)
T TIGR03343 139 PSLFAPMPMEGIKLLF----KLYAEPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWD 214 (282)
T ss_pred ccccccCchHHHHHHH----HHhcCCCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccch
Confidence 100 01111111111 000000000000000000 0000000000000 0000 0000000000000 00112
Q ss_pred HHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 151 IERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 151 ~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
....+.++++|+|+++|++|.+++++.++.+.+.+ +++++++++++||+++.|+|+. +.+.|.+|++
T Consensus 215 ~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~--~~~~~~~i~~agH~~~~e~p~~----~~~~i~~fl~ 281 (282)
T TIGR03343 215 VTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNM--PDAQLHVFSRCGHWAQWEHADA----FNRLVIDFLR 281 (282)
T ss_pred HHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhC--CCCEEEEeCCCCcCCcccCHHH----HHHHHHHHhh
Confidence 33457889999999999999999998888877664 5899999999999999999875 5667778875
No 21
>PRK06489 hypothetical protein; Provisional
Probab=99.92 E-value=2e-23 Score=170.53 Aligned_cols=211 Identities=16% Similarity=0.139 Sum_probs=116.5
Q ss_pred CCCCCCCCCCCcccc------cccHHHHHHHHHHHH-HhhhcCCCCCCCCe-EEEecccchHHHHHHHhhCCCceeEEEE
Q 026829 1 MDYPGFGLSAGLHGY------IPSFDRLVDDVIEHY-SNIKEYPEFRTLPS-FLFGQSLGGAVALKVHLKQPNAWSGAIL 72 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~------~~~~~~~~~d~~~~~-~~l~~~~~~~~~~~-~lvGhSmGg~ia~~~a~~~p~~v~~lil 72 (232)
+|+||||.|+.+... .++++++++++.+.+ +.+.. .++ +|+||||||+||+.+|.++|++|+++|+
T Consensus 111 ~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi------~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVL 184 (360)
T PRK06489 111 PDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGV------KHLRLILGTSMGGMHAWMWGEKYPDFMDALMP 184 (360)
T ss_pred eCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCC------CceeEEEEECHHHHHHHHHHHhCchhhheeee
Confidence 699999999754321 247889998877754 43321 145 4899999999999999999999999999
Q ss_pred cCccccCCcCCCChHHHHHH-HHHHHhhcCCCc-cCCC-CchhhHhh------c----------Cchhhhhhcc--cccc
Q 026829 73 VAPMCKIADDMVPPFLVKQI-LIGIANILPKHK-LVPQ-KDLAEAAF------R----------DLKNRELTKY--NVIV 131 (232)
Q Consensus 73 ~ap~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~-~~~~~~~~------~----------~~~~~~~~~~--~~~~ 131 (232)
+++....... ..+..... ............ .... ........ . .......... ....
T Consensus 185 i~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T PRK06489 185 MASQPTEMSG--RNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLA 262 (360)
T ss_pred eccCcccccH--HHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHH
Confidence 9875321110 01111111 111111000000 0000 00000000 0 0000000000 0000
Q ss_pred cCCcccHHHHHHHHHHH--HHHHHhcCcCCccEEEEeeCCCCccChhHH--HHHHHHhcCCCccEEEcCCC----ccccc
Q 026829 132 YKDKPRLRTALELLKTT--EGIERRLEKVSLPLLILHGENDTVTDPSVS--KALYEKASSKDKKCILYKDA----FHSLL 203 (232)
Q Consensus 132 ~~~~~~l~~~~~~~~~~--~~~~~~l~~i~~PvLii~G~~D~~v~~~~~--~~~~~~~~~~~~~~~~~~~~----~H~~~ 203 (232)
.........+...+... .+..+.+.+|++|||+|+|++|.++|++.+ +.+.+.+ ++.++++++++ ||.++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~i--p~a~l~~i~~a~~~~GH~~~ 340 (360)
T PRK06489 263 APVTADANDFLYQWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRV--KHGRLVLIPASPETRGHGTT 340 (360)
T ss_pred hhhhcCHHHHHHHHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhC--cCCeEEEECCCCCCCCcccc
Confidence 00000011111111111 123456789999999999999999998865 5565554 57899999996 99997
Q ss_pred cCCChhHHHHHHHHHHHHHHhhh
Q 026829 204 EGEPDDMIIRVFADIISWLDDHS 226 (232)
Q Consensus 204 ~e~~~~~~~~~~~~i~~~l~~~~ 226 (232)
|+|+. +.+.|.+||++..
T Consensus 341 -e~P~~----~~~~i~~FL~~~~ 358 (360)
T PRK06489 341 -GSAKF----WKAYLAEFLAQVP 358 (360)
T ss_pred -cCHHH----HHHHHHHHHHhcc
Confidence 78775 6667778887654
No 22
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.91 E-value=1.9e-23 Score=164.52 Aligned_cols=208 Identities=20% Similarity=0.308 Sum_probs=120.5
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|+.+.....+++++++++.++++.+. ..+++|+||||||++++.++.++|++++++|++++.....
T Consensus 60 ~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~ 133 (278)
T TIGR03056 60 PDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEG------LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPF 133 (278)
T ss_pred ecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcC------CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCccccc
Confidence 6999999998655434589999999988877542 2368999999999999999999999999999998754321
Q ss_pred cCCC---ChHHHHHHHHHHHhhcCCC--ccCCCCchhhHhhcCchhhhhhccccccc----CCcccHHHHHHHHHH--HH
Q 026829 81 DDMV---PPFLVKQILIGIANILPKH--KLVPQKDLAEAAFRDLKNRELTKYNVIVY----KDKPRLRTALELLKT--TE 149 (232)
Q Consensus 81 ~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~--~~ 149 (232)
.... .+.. ..... .....+.. ............+..... .........+ ...........++.. ..
T Consensus 134 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (278)
T TIGR03056 134 EGMAGTLFPYM-ARVLA-CNPFTPPMMSRGAADQQRVERLIRDTGS-LLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLA 210 (278)
T ss_pred ccccccccchh-hHhhh-hcccchHHHHhhcccCcchhHHhhcccc-ccccchhhHHHHhhcCchhhhHHHHHhhccccc
Confidence 1110 0100 00000 00000000 000000000000100000 0000000000 000001111111111 01
Q ss_pred HHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 150 GIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 150 ~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
.....+.++++|+|+|+|++|.++|++.++.+.+.+ +++++++++++||+++.|.|++ +.+.|.+|++
T Consensus 211 ~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~f~~ 278 (278)
T TIGR03056 211 PLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRV--PTATLHVVPGGGHLVHEEQADG----VVGLILQAAE 278 (278)
T ss_pred chhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhc--cCCeEEEECCCCCcccccCHHH----HHHHHHHHhC
Confidence 123457789999999999999999998887776554 5789999999999999988875 6667777763
No 23
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.91 E-value=2.8e-23 Score=151.29 Aligned_cols=196 Identities=22% Similarity=0.312 Sum_probs=133.4
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+-+||||-....-- ..++++|.+++.+.+++|++.. -..++++|-||||.+|+.+|..+| ++++|.+++.....
T Consensus 48 P~ypGHG~~~e~fl-~t~~~DW~~~v~d~Y~~L~~~g---y~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k 121 (243)
T COG1647 48 PRYPGHGTLPEDFL-KTTPRDWWEDVEDGYRDLKEAG---YDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVK 121 (243)
T ss_pred CCCCCCCCCHHHHh-cCCHHHHHHHHHHHHHHHHHcC---CCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccc
Confidence 35899998753211 2378999999999999998531 125899999999999999999998 78988887655433
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCc
Q 026829 81 DDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSL 160 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~ 160 (232)
.... +...++....+ +. .+..++. ..+. .....|.+.+ ..+..++....+++++.+..|..
T Consensus 122 ~~~~---iie~~l~y~~~-~k---k~e~k~~--e~~~---------~e~~~~~~~~-~~~~~~~~~~i~~~~~~~~~I~~ 182 (243)
T COG1647 122 SWRI---IIEGLLEYFRN-AK---KYEGKDQ--EQID---------KEMKSYKDTP-MTTTAQLKKLIKDARRSLDKIYS 182 (243)
T ss_pred cchh---hhHHHHHHHHH-hh---hccCCCH--HHHH---------HHHHHhhcch-HHHHHHHHHHHHHHHhhhhhccc
Confidence 2111 11222211111 10 0111110 0000 0011122111 22334455556678888999999
Q ss_pred cEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHh
Q 026829 161 PLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 224 (232)
Q Consensus 161 PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~ 224 (232)
|+++++|.+|++||.+.+..++....+.++++++++++||.+.+++. .+++.+++++||+.
T Consensus 183 pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~E---rd~v~e~V~~FL~~ 243 (243)
T COG1647 183 PTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKE---RDQVEEDVITFLEK 243 (243)
T ss_pred chhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchh---HHHHHHHHHHHhhC
Confidence 99999999999999999999999887788999999999999998653 45799999999963
No 24
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.91 E-value=4.3e-24 Score=164.37 Aligned_cols=199 Identities=22% Similarity=0.333 Sum_probs=114.7
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|..... .+++++++++.+.+ ..+++++||||||.+++.++.++|++++++|++++.....
T Consensus 36 ~d~~G~G~s~~~~~--~~~~~~~~~~~~~~----------~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~ 103 (245)
T TIGR01738 36 VDLPGHGRSRGFGP--LSLADAAEAIAAQA----------PDPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFS 103 (245)
T ss_pred ecCCcCccCCCCCC--cCHHHHHHHHHHhC----------CCCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccc
Confidence 69999999976433 37778777765432 1378999999999999999999999999999998765432
Q ss_pred cC-CCC----hHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhh---hhcccccccCCcc---cHHHHHHHHHHHH
Q 026829 81 DD-MVP----PFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRE---LTKYNVIVYKDKP---RLRTALELLKTTE 149 (232)
Q Consensus 81 ~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~l~~~~~~~~~~~ 149 (232)
.. ..+ ......+...+..... ... ...+....+....... ........ ...+ .+...+..+.. .
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~ 178 (245)
T TIGR01738 104 AREDWPEGIKPDVLTGFQQQLSDDYQ--RTI-ERFLALQTLGTPTARQDARALKQTLLA-RPTPNVQVLQAGLEILAT-V 178 (245)
T ss_pred cCCcccccCCHHHHHHHHHHhhhhHH--HHH-HHHHHHHHhcCCccchHHHHHHHHhhc-cCCCCHHHHHHHHHHhhc-c
Confidence 11 111 1111111000000000 000 0000000000000000 00000000 0011 11222222211 1
Q ss_pred HHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHH
Q 026829 150 GIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWL 222 (232)
Q Consensus 150 ~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l 222 (232)
+....+.++++|+|+++|++|.++|++..+.+.+.+ +++++++++++||+++.|+|++ +.+.+.+|+
T Consensus 179 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~fi 245 (245)
T TIGR01738 179 DLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLA--PHSELYIFAKAAHAPFLSHAEA----FCALLVAFK 245 (245)
T ss_pred cHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhC--CCCeEEEeCCCCCCccccCHHH----HHHHHHhhC
Confidence 234567889999999999999999998887776654 5789999999999999999876 555666664
No 25
>PLN02578 hydrolase
Probab=99.91 E-value=2.3e-23 Score=169.76 Aligned_cols=209 Identities=21% Similarity=0.263 Sum_probs=121.1
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|+++.. .++.+.+++++.++++.+. ..+++|+||||||.||+.+|.++|++|+++|+++|.....
T Consensus 118 ~D~~G~G~S~~~~~-~~~~~~~a~~l~~~i~~~~------~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~ 190 (354)
T PLN02578 118 LDLLGFGWSDKALI-EYDAMVWRDQVADFVKEVV------KEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFG 190 (354)
T ss_pred ECCCCCCCCCCccc-ccCHHHHHHHHHHHHHHhc------cCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCcccc
Confidence 69999999987543 2478888999988887653 2378999999999999999999999999999998754322
Q ss_pred cCCC--C-------hH----HHHHHHHHHHhhcCCC--ccCCCCchhh----HhhcCchhh-hhhcccc-cccCCcccHH
Q 026829 81 DDMV--P-------PF----LVKQILIGIANILPKH--KLVPQKDLAE----AAFRDLKNR-ELTKYNV-IVYKDKPRLR 139 (232)
Q Consensus 81 ~~~~--~-------~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~-~~~~~~~-~~~~~~~~l~ 139 (232)
.... + .. ..........+..... .......... ..+.+.... ....... ....+.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (354)
T PLN02578 191 SESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGE 270 (354)
T ss_pred ccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHH
Confidence 1100 0 00 0000000000000000 0000000000 001000000 0000000 0000111111
Q ss_pred HHHHHHHHH------HHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHH
Q 026829 140 TALELLKTT------EGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIR 213 (232)
Q Consensus 140 ~~~~~~~~~------~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~ 213 (232)
.....+... ....+.++++++|+|+|||++|.++|++.+..+.+.+ ++.+++++ ++||+++.|+|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~--p~a~l~~i-~~GH~~~~e~p~~---- 343 (354)
T PLN02578 271 VYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFY--PDTTLVNL-QAGHCPHDEVPEQ---- 343 (354)
T ss_pred HHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCEEEEe-CCCCCccccCHHH----
Confidence 112222110 1134567889999999999999999998888776654 57888888 5899999999986
Q ss_pred HHHHHHHHHH
Q 026829 214 VFADIISWLD 223 (232)
Q Consensus 214 ~~~~i~~~l~ 223 (232)
+.+.|.+|++
T Consensus 344 ~~~~I~~fl~ 353 (354)
T PLN02578 344 VNKALLEWLS 353 (354)
T ss_pred HHHHHHHHHh
Confidence 6677888875
No 26
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.91 E-value=3.6e-23 Score=168.85 Aligned_cols=204 Identities=17% Similarity=0.190 Sum_probs=120.0
Q ss_pred CCCCCCCCCCCccc---ccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccc
Q 026829 1 MDYPGFGLSAGLHG---YIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 77 (232)
Q Consensus 1 ~D~~G~G~S~~~~~---~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~ 77 (232)
+|+||||.|+.+.. ...+++++++++.++++.+.. .+++|+||||||+|++.+|.++|++|+++|+++|..
T Consensus 159 ~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~------~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 159 FDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKS------DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred ECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCC------CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 69999999986542 235899999999999887642 268999999999999999999999999999999864
Q ss_pred cCCcCCCChHHHHHHHHH-HHhhcCCCccCCCCchhhHhhcC--ch--hh-hhhcccccccCCccc----HHHHHHHHHH
Q 026829 78 KIADDMVPPFLVKQILIG-IANILPKHKLVPQKDLAEAAFRD--LK--NR-ELTKYNVIVYKDKPR----LRTALELLKT 147 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~--~~-~~~~~~~~~~~~~~~----l~~~~~~~~~ 147 (232)
.......+.. ...+... ...++..... . .....+.. .. .. ....+.. .+..... +......+..
T Consensus 233 ~~~~~~~p~~-l~~~~~~l~~~~~~~~~~---~-~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~l~~~~r~~~~ 306 (383)
T PLN03084 233 TKEHAKLPST-LSEFSNFLLGEIFSQDPL---R-ASDKALTSCGPYAMKEDDAMVYRR-PYLTSGSSGFALNAISRSMKK 306 (383)
T ss_pred ccccccchHH-HHHHHHHHhhhhhhcchH---H-HHhhhhcccCccCCCHHHHHHHhc-cccCCcchHHHHHHHHHHhhc
Confidence 3211111211 1111000 0000000000 0 00000000 00 00 0000000 0111110 1111111110
Q ss_pred -----HHHHHHhc--CcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHH
Q 026829 148 -----TEGIERRL--EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIIS 220 (232)
Q Consensus 148 -----~~~~~~~l--~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~ 220 (232)
..++...+ .++++|||+|||+.|.+++++.++.+.+. .+.++++++++||++++|+|++ +.+.|.+
T Consensus 307 ~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~---~~a~l~vIp~aGH~~~~E~Pe~----v~~~I~~ 379 (383)
T PLN03084 307 ELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS---SQHKLIELPMAGHHVQEDCGEE----LGGIISG 379 (383)
T ss_pred ccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh---cCCeEEEECCCCCCcchhCHHH----HHHHHHH
Confidence 01111111 46799999999999999999887776654 2679999999999999999986 6667777
Q ss_pred HHH
Q 026829 221 WLD 223 (232)
Q Consensus 221 ~l~ 223 (232)
|+.
T Consensus 380 Fl~ 382 (383)
T PLN03084 380 ILS 382 (383)
T ss_pred Hhh
Confidence 875
No 27
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.91 E-value=2.2e-23 Score=161.25 Aligned_cols=198 Identities=18% Similarity=0.214 Sum_probs=111.6
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCc-eeEEEEcCccccC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNA-WSGAILVAPMCKI 79 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~-v~~lil~ap~~~~ 79 (232)
+|+||||.|+.+.. .+++++++++.+.++.+. ..+++++||||||.+|+.+|.++|+. |++++++++....
T Consensus 33 ~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~~------~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~ 104 (242)
T PRK11126 33 IDLPGHGGSAAISV--DGFADVSRLLSQTLQSYN------ILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGL 104 (242)
T ss_pred ecCCCCCCCCCccc--cCHHHHHHHHHHHHHHcC------CCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCC
Confidence 69999999986543 389999999988887642 23789999999999999999998664 9999999876432
Q ss_pred CcCCCChHHHHHHHH--HHHhhcCCCccCCCCchhhHhhcCch-----hhhhhcc-cccccCCcccHHHHHHHH--HHHH
Q 026829 80 ADDMVPPFLVKQILI--GIANILPKHKLVPQKDLAEAAFRDLK-----NRELTKY-NVIVYKDKPRLRTALELL--KTTE 149 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~l~~~~~~~--~~~~ 149 (232)
... ......... .+...+... ....+....+.... ......+ .................. ....
T Consensus 105 ~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (242)
T PRK11126 105 QNA---EERQARWQNDRQWAQRFRQE---PLEQVLADWYQQPVFASLNAEQRQQLVAKRSNNNGAAVAAMLEATSLAKQP 178 (242)
T ss_pred CCH---HHHHHHHhhhHHHHHHhccC---cHHHHHHHHHhcchhhccCccHHHHHHHhcccCCHHHHHHHHHhcCcccCC
Confidence 210 100000000 000000000 00000000000000 0000000 000000000011100000 0011
Q ss_pred HHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHh
Q 026829 150 GIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 224 (232)
Q Consensus 150 ~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~ 224 (232)
+..+.+.++++|+++|||++|.++. .+.++ .++++++++++||+++.|+|++ +.+.|.+|+.+
T Consensus 179 ~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~---~~~~~~~i~~~gH~~~~e~p~~----~~~~i~~fl~~ 241 (242)
T PRK11126 179 DLRPALQALTFPFYYLCGERDSKFQ-----ALAQQ---LALPLHVIPNAGHNAHRENPAA----FAASLAQILRL 241 (242)
T ss_pred cHHHHhhccCCCeEEEEeCCcchHH-----HHHHH---hcCeEEEeCCCCCchhhhChHH----HHHHHHHHHhh
Confidence 3345678899999999999998652 22222 2689999999999999999986 55667778754
No 28
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.91 E-value=5.6e-24 Score=172.72 Aligned_cols=211 Identities=13% Similarity=0.086 Sum_probs=119.4
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|.. .. .++.++++|+.++++.+.. +..++|+||||||+||+.+|.++|++|+++||+++.....
T Consensus 105 ~Dl~G~g~s~~-~~--~~~~~~a~dl~~ll~~l~l-----~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~ 176 (343)
T PRK08775 105 FDFIGADGSLD-VP--IDTADQADAIALLLDALGI-----ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAH 176 (343)
T ss_pred EeCCCCCCCCC-CC--CCHHHHHHHHHHHHHHcCC-----CcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCC
Confidence 69999998853 22 3678899999988887532 1124699999999999999999999999999999864321
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCc-cCCCCchhhH----hhcCchh--hhhhccc----------cccc--------CCc
Q 026829 81 DDMVPPFLVKQILIGIANILPKHK-LVPQKDLAEA----AFRDLKN--RELTKYN----------VIVY--------KDK 135 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~--~~~~~~~----------~~~~--------~~~ 135 (232)
. . ................... .......... .+..... ....... ...+ ...
T Consensus 177 ~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 253 (343)
T PRK08775 177 P-Y--AAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVAR 253 (343)
T ss_pred H-H--HHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHh
Confidence 0 0 0000000000000000000 0000000000 0000000 0000000 0000 000
Q ss_pred ccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCC-CccccccCCChhHHHHH
Q 026829 136 PRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKD-AFHSLLEGEPDDMIIRV 214 (232)
Q Consensus 136 ~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~H~~~~e~~~~~~~~~ 214 (232)
........+..........+.+|++|+|+|+|++|.++|++.+..+.+.+. ++.+++++++ +||.++.|+|++ +
T Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~-p~a~l~~i~~~aGH~~~lE~Pe~----~ 328 (343)
T PRK08775 254 TPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLG-PRGSLRVLRSPYGHDAFLKETDR----I 328 (343)
T ss_pred cChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcC-CCCeEEEEeCCccHHHHhcCHHH----H
Confidence 000000111111100012367899999999999999999888888777653 4789999985 999999999985 6
Q ss_pred HHHHHHHHHhhhc
Q 026829 215 FADIISWLDDHSR 227 (232)
Q Consensus 215 ~~~i~~~l~~~~~ 227 (232)
.+.+.+||.+..+
T Consensus 329 ~~~l~~FL~~~~~ 341 (343)
T PRK08775 329 DAILTTALRSTGE 341 (343)
T ss_pred HHHHHHHHHhccc
Confidence 7778889976544
No 29
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.90 E-value=4e-23 Score=165.12 Aligned_cols=212 Identities=23% Similarity=0.306 Sum_probs=121.4
Q ss_pred CCCCCCC-CCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEE---EcCcc
Q 026829 1 MDYPGFG-LSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAI---LVAPM 76 (232)
Q Consensus 1 ~D~~G~G-~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~li---l~ap~ 76 (232)
+|++||| .|..+.+..++..++++.+...+... ...+++|+||||||.+|+.+|+.+|+.|+++| +++|.
T Consensus 92 iDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~------~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~ 165 (326)
T KOG1454|consen 92 IDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV------FVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPP 165 (326)
T ss_pred EecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh------cCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccc
Confidence 5999999 45555555567788887776665443 23478999999999999999999999999999 66665
Q ss_pred ccCCcCCCChHHHHHHHH----HHHhhcCCCccCCCCchhhHhhcCchhh----hhhcccccccCCcc---cH-HH-HHH
Q 026829 77 CKIADDMVPPFLVKQILI----GIANILPKHKLVPQKDLAEAAFRDLKNR----ELTKYNVIVYKDKP---RL-RT-ALE 143 (232)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~l-~~-~~~ 143 (232)
....+.. +. .....+. ......+.....+............... .....+.......+ .. +. ...
T Consensus 166 ~~~~~~~-~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (326)
T KOG1454|consen 166 VYSTPKG-IK-GLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLS 243 (326)
T ss_pred cccCCcc-hh-HHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheee
Confidence 5432211 11 1111111 1111111000000000000000000000 00000000000000 00 00 000
Q ss_pred HHH--H--HHHHHHhcCcCC-ccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHH
Q 026829 144 LLK--T--TEGIERRLEKVS-LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADI 218 (232)
Q Consensus 144 ~~~--~--~~~~~~~l~~i~-~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i 218 (232)
++. . .+.....+.++. +|+|++||++|+++|.+.+..+.++. ++.++++++++||++|.|+|++ +.+.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~--pn~~~~~I~~~gH~~h~e~Pe~----~~~~i 317 (326)
T KOG1454|consen 244 LFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKL--PNAELVEIPGAGHLPHLERPEE----VAALL 317 (326)
T ss_pred EEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhC--CCceEEEeCCCCcccccCCHHH----HHHHH
Confidence 000 0 123334566775 99999999999999999888887765 6899999999999999999986 66778
Q ss_pred HHHHHhhh
Q 026829 219 ISWLDDHS 226 (232)
Q Consensus 219 ~~~l~~~~ 226 (232)
..|+....
T Consensus 318 ~~Fi~~~~ 325 (326)
T KOG1454|consen 318 RSFIARLR 325 (326)
T ss_pred HHHHHHhc
Confidence 88887653
No 30
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.90 E-value=1e-23 Score=160.22 Aligned_cols=190 Identities=24% Similarity=0.408 Sum_probs=119.4
Q ss_pred CCCCCCCCCCCccc-ccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccC
Q 026829 1 MDYPGFGLSAGLHG-YIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 79 (232)
Q Consensus 1 ~D~~G~G~S~~~~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~ 79 (232)
+|+||||.|+.... ...+++++++++.++++.+.. .+++|+||||||.+++.++.++|++|+++|+++|....
T Consensus 30 ~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 30 FDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGI------KKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPL 103 (228)
T ss_dssp EECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTT------SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSH
T ss_pred EecCCccccccccccCCcchhhhhhhhhhccccccc------ccccccccccccccccccccccccccccceeecccccc
Confidence 59999999987553 235889999999998887642 37999999999999999999999999999999997642
Q ss_pred CcCC--C-ChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHH---HHHHHHH
Q 026829 80 ADDM--V-PPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLK---TTEGIER 153 (232)
Q Consensus 80 ~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~ 153 (232)
.... . .+.............. ..+....+......... ..... .......+.+. ...+...
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~ 170 (228)
T PF12697_consen 104 PDSPSRSFGPSFIRRLLAWRSRSL--------RRLASRFFYRWFDGDEP-EDLIR----SSRRALAEYLRSNLWQADLSE 170 (228)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHTHHHH-HHHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccchhhhhhhhcccccc--------ccccccccccccccccc-ccccc----ccccccccccccccccccccc
Confidence 1100 0 0011111111000000 00000000000000000 00000 01112222222 2234456
Q ss_pred hcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHH
Q 026829 154 RLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMI 211 (232)
Q Consensus 154 ~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~ 211 (232)
.++.+++|+++++|++|.+++.+..+.+.+.. +++++++++++||+++.|+|+++.
T Consensus 171 ~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~ 226 (228)
T PF12697_consen 171 ALPRIKVPVLVIHGEDDPIVPPESAEELADKL--PNAELVVIPGAGHFLFLEQPDEVA 226 (228)
T ss_dssp HHHGSSSEEEEEEETTSSSSHHHHHHHHHHHS--TTEEEEEETTSSSTHHHHSHHHHH
T ss_pred cccccCCCeEEeecCCCCCCCHHHHHHHHHHC--CCCEEEEECCCCCccHHHCHHHHh
Confidence 77888999999999999999988877776654 589999999999999999998743
No 31
>PRK07581 hypothetical protein; Validated
Probab=99.90 E-value=1.1e-22 Score=165.06 Aligned_cols=70 Identities=13% Similarity=-0.018 Sum_probs=57.8
Q ss_pred HHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCC-CccccccCCChhHHHHHHHHHHHHHHhhh
Q 026829 151 IERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKD-AFHSLLEGEPDDMIIRVFADIISWLDDHS 226 (232)
Q Consensus 151 ~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~H~~~~e~~~~~~~~~~~~i~~~l~~~~ 226 (232)
....+.+|++|||+|+|++|.++|++.++.+.+.+ ++.+++++++ +||..+.|+|+. ++..+.+|+.+..
T Consensus 267 ~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~i--p~a~l~~i~~~~GH~~~~~~~~~----~~~~~~~~~~~~~ 337 (339)
T PRK07581 267 LAAALGSITAKTFVMPISTDLYFPPEDCEAEAALI--PNAELRPIESIWGHLAGFGQNPA----DIAFIDAALKELL 337 (339)
T ss_pred HHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEeCCCCCccccccCcHH----HHHHHHHHHHHHH
Confidence 45667889999999999999999999888776665 5789999999 999999999886 5566667776654
No 32
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.90 E-value=5.7e-23 Score=158.94 Aligned_cols=212 Identities=18% Similarity=0.295 Sum_probs=123.2
Q ss_pred CCCCCCCCCCCccc-ccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccC
Q 026829 1 MDYPGFGLSAGLHG-YIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 79 (232)
Q Consensus 1 ~D~~G~G~S~~~~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~ 79 (232)
+|+||+|.|+.+.. ..+|+..++.|+..+++.+. ..+++++||+|||+||+++|+.+|++|+|+|+++....
T Consensus 77 ~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg------~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~- 149 (322)
T KOG4178|consen 77 PDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLG------LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP- 149 (322)
T ss_pred cCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhc------cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC-
Confidence 69999999998765 56799999999999998874 23689999999999999999999999999999875433
Q ss_pred CcCCCChHHHHHHHHHHHhh----cCCCccCCCCchh--------hHhhcCchh----hh---------hhcccccccC-
Q 026829 80 ADDMVPPFLVKQILIGIANI----LPKHKLVPQKDLA--------EAAFRDLKN----RE---------LTKYNVIVYK- 133 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--------~~~~~~~~~----~~---------~~~~~~~~~~- 133 (232)
.....+ .-...... ...+ ++.. ..+...++ ..++....- .. .+..+...|.
T Consensus 150 ~p~~~~-~~~~~~~f-~~~~y~~~fQ~~-~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~ 226 (322)
T KOG4178|consen 150 NPKLKP-LDSSKAIF-GKSYYICLFQEP-GKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVS 226 (322)
T ss_pred Ccccch-hhhhcccc-CccceeEecccc-CcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHh
Confidence 100000 00000000 0000 0000 00000000 000000000 00 0000000000
Q ss_pred --CcccHHHHHHHHHHHHHH----HHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCC
Q 026829 134 --DKPRLRTALELLKTTEGI----ERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEP 207 (232)
Q Consensus 134 --~~~~l~~~~~~~~~~~~~----~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~ 207 (232)
....+...++.++.++.. ...+..+++||++|||.+|.+.+.......+++.-..-.+.++++|+||.++.|+|
T Consensus 227 ~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p 306 (322)
T KOG4178|consen 227 KFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKP 306 (322)
T ss_pred ccccccccccchhhHHHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCH
Confidence 000111112222222211 23456789999999999999998763334444432223478999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhh
Q 026829 208 DDMIIRVFADIISWLDDHS 226 (232)
Q Consensus 208 ~~~~~~~~~~i~~~l~~~~ 226 (232)
++ ++++|+.||++..
T Consensus 307 ~~----v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 307 QE----VNQAILGFINSFS 321 (322)
T ss_pred HH----HHHHHHHHHHhhc
Confidence 86 8889999998753
No 33
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.89 E-value=2.9e-23 Score=160.16 Aligned_cols=201 Identities=19% Similarity=0.298 Sum_probs=116.6
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|+.... ..+++++++++.+.++.+. ..+++++||||||++++.+|.++|++++++|+++|.....
T Consensus 45 ~d~~G~G~s~~~~~-~~~~~~~~~~~~~~i~~~~------~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~ 117 (251)
T TIGR02427 45 YDKRGHGLSDAPEG-PYSIEDLADDVLALLDHLG------IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIG 117 (251)
T ss_pred ecCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHhC------CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccC
Confidence 69999999975433 3488999999988887653 2368999999999999999999999999999998764322
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCc----hhhhhhccc-ccccCCcccHHHHHHHHHHHHHHHHhc
Q 026829 81 DDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDL----KNRELTKYN-VIVYKDKPRLRTALELLKTTEGIERRL 155 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~l 155 (232)
.. ..+. .. ...+... ....... ......+... .......+. ................+. ..+..+.+
T Consensus 118 ~~--~~~~-~~-~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 189 (251)
T TIGR02427 118 TP--ESWN-AR-IAAVRAE--GLAALAD-AVLERWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIR-DADFRDRL 189 (251)
T ss_pred ch--hhHH-HH-Hhhhhhc--cHHHHHH-HHHHHHcccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHh-cccHHHHh
Confidence 10 0110 00 0000000 0000000 0000000000 000000000 000000000000001111 11233556
Q ss_pred CcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHH
Q 026829 156 EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWL 222 (232)
Q Consensus 156 ~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l 222 (232)
.++++|+++++|++|.++|++..+.+.+.. ++.++++++++||.++.|+|++ +.+.+.+|+
T Consensus 190 ~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~----~~~~i~~fl 250 (251)
T TIGR02427 190 GAIAVPTLCIAGDQDGSTPPELVREIADLV--PGARFAEIRGAGHIPCVEQPEA----FNAALRDFL 250 (251)
T ss_pred hhcCCCeEEEEeccCCcCChHHHHHHHHhC--CCceEEEECCCCCcccccChHH----HHHHHHHHh
Confidence 788999999999999999998887776654 4789999999999999998876 445555665
No 34
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.88 E-value=4e-22 Score=157.05 Aligned_cols=203 Identities=18% Similarity=0.262 Sum_probs=113.7
Q ss_pred CCCCCCCCCCCcccc--cccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcccc
Q 026829 1 MDYPGFGLSAGLHGY--IPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 78 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~ 78 (232)
+|+||||.|..+... ..+++++++++.++++.+.. .+++++||||||.+++.++.++|++++++|++++...
T Consensus 59 ~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 59 YDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGL------DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDS 132 (288)
T ss_pred EcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCC------CcEEEEEeehHHHHHHHHHHhCccccceeeEeccccc
Confidence 699999999865322 25789999998877765431 2589999999999999999999999999999987542
Q ss_pred CCcCCCChHHH--HHHH--------HHHHhhcCCCccCCCCchhh---HhhcCch-hhhhhcccccccCCcccHHHHHHH
Q 026829 79 IADDMVPPFLV--KQIL--------IGIANILPKHKLVPQKDLAE---AAFRDLK-NRELTKYNVIVYKDKPRLRTALEL 144 (232)
Q Consensus 79 ~~~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 144 (232)
.. .... .... ..+...... .......... ....... .............. ......+..
T Consensus 133 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 205 (288)
T TIGR01250 133 AP-----EYVKELNRLRKELPPEVRAAIKRCEAS-GDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKS-GMNTNVYNI 205 (288)
T ss_pred ch-----HHHHHHHHHHhhcChhHHHHHHHHHhc-cCcchHHHHHHHHHHHHHhhcccccchHHHHHHhh-ccCHHHHhc
Confidence 11 1100 0000 000000000 0000000000 0000000 00000000000000 000000000
Q ss_pred HH-----------HHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHH
Q 026829 145 LK-----------TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIR 213 (232)
Q Consensus 145 ~~-----------~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~ 213 (232)
+. ...+....+.++++|+|+++|++|.+ ++..++.+.+.+ ++.++++++++||+++.|+|++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~p~~---- 278 (288)
T TIGR01250 206 MQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELI--AGSRLVVFPDGSHMTMIEDPEV---- 278 (288)
T ss_pred ccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhc--cCCeEEEeCCCCCCcccCCHHH----
Confidence 00 00123345778999999999999985 566676666544 4778999999999999998876
Q ss_pred HHHHHHHHHH
Q 026829 214 VFADIISWLD 223 (232)
Q Consensus 214 ~~~~i~~~l~ 223 (232)
+.+.|.+||+
T Consensus 279 ~~~~i~~fl~ 288 (288)
T TIGR01250 279 YFKLLSDFIR 288 (288)
T ss_pred HHHHHHHHhC
Confidence 5566677763
No 35
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.88 E-value=1.2e-22 Score=155.43 Aligned_cols=203 Identities=19% Similarity=0.210 Sum_probs=115.9
Q ss_pred CCCCCCCCCCC---cccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccc
Q 026829 1 MDYPGFGLSAG---LHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 77 (232)
Q Consensus 1 ~D~~G~G~S~~---~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~ 77 (232)
+|+||+|.|++ ......+.+++++++...++.+.. .+++++||||||.+++.++.++|++|+++|+++++.
T Consensus 6 ~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 6 FDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGI------KKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTT------SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred EeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCC------CCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 58999999985 333344788888888877776532 258999999999999999999999999999999851
Q ss_pred ----cCCcCCCCh-HHHHHHHHHHHh-hcCCCccCCCCc------hhhHhhcCchhhhhhcccccccCCcccHHHHH---
Q 026829 78 ----KIADDMVPP-FLVKQILIGIAN-ILPKHKLVPQKD------LAEAAFRDLKNRELTKYNVIVYKDKPRLRTAL--- 142 (232)
Q Consensus 78 ----~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--- 142 (232)
.......+. ............ ............ .......+..+... .................
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 158 (230)
T PF00561_consen 80 DLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQ-SQQYARFAETDAFDNMFWNA 158 (230)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH-HHHHHHTCHHHHHHHHHHHH
T ss_pred cchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccc-hhhhhHHHHHHHHhhhcccc
Confidence 111111111 000000000000 000000000000 00000000000000 00000000000000111
Q ss_pred HHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHH
Q 026829 143 ELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMII 212 (232)
Q Consensus 143 ~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~ 212 (232)
.......+....+..+++|+|+++|++|.++|++.+..+.+.+ ++.++++++++||..+.++|+++.+
T Consensus 159 ~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~GH~~~~~~~~~~~~ 226 (230)
T PF00561_consen 159 LGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLI--PNSQLVLIEGSGHFAFLEGPDEFNE 226 (230)
T ss_dssp HHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHS--TTEEEEEETTCCSTHHHHSHHHHHH
T ss_pred ccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhc--CCCEEEECCCCChHHHhcCHHhhhh
Confidence 1111223445677889999999999999999999888866554 5789999999999999999887544
No 36
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.88 E-value=2.5e-21 Score=159.82 Aligned_cols=216 Identities=19% Similarity=0.202 Sum_probs=111.3
Q ss_pred CCCCCCCCCCCcccccccHH----HHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcc
Q 026829 1 MDYPGFGLSAGLHGYIPSFD----RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 76 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~----~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~ 76 (232)
+|+||||.|+++.....+.+ .+++++.+.++.+. ..+++|+||||||.+|+.+|.++|++|+++|+++|.
T Consensus 137 ~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~------~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 137 IDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKN------LSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred ECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcC------CCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 69999999976432211222 23444444443321 126899999999999999999999999999999987
Q ss_pred ccCCcCCC-ChHHHH---HHHHH-HHhhc-----CCC--c-cCC-CCchhhHh----hcCch-hhhhh--------cccc
Q 026829 77 CKIADDMV-PPFLVK---QILIG-IANIL-----PKH--K-LVP-QKDLAEAA----FRDLK-NRELT--------KYNV 129 (232)
Q Consensus 77 ~~~~~~~~-~~~~~~---~~~~~-~~~~~-----~~~--~-~~~-~~~~~~~~----~~~~~-~~~~~--------~~~~ 129 (232)
........ ..+... ..... +.... +.. . ..+ ...+.... +.... ..... .+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 290 (402)
T PLN02894 211 GFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVY 290 (402)
T ss_pred cccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHH
Confidence 54322110 000000 00000 00000 000 0 000 00000000 00000 00000 0000
Q ss_pred cccCCcccHHHHHHHHH-----HHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCcccccc
Q 026829 130 IVYKDKPRLRTALELLK-----TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE 204 (232)
Q Consensus 130 ~~~~~~~~l~~~~~~~~-----~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 204 (232)
......+.-...+..+. ...+..+.+.++++||++|+|++|.+.+ .....+.+.. ...+++++++++||+++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~-~~~~~~~~i~~aGH~~~~ 368 (402)
T PLN02894 291 HTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRM-KVPCEIIRVPQGGHFVFL 368 (402)
T ss_pred HhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHc-CCCCcEEEeCCCCCeeec
Confidence 00000000001111110 1123445688899999999999998775 4454555544 235789999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHh
Q 026829 205 GEPDDMIIRVFADIISWLDD 224 (232)
Q Consensus 205 e~~~~~~~~~~~~i~~~l~~ 224 (232)
|+|+++...+...+.+|+..
T Consensus 369 E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 369 DNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred cCHHHHHHHHHHHHHHhccC
Confidence 99987655555444455544
No 37
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.87 E-value=1.5e-21 Score=150.39 Aligned_cols=205 Identities=18% Similarity=0.253 Sum_probs=111.5
Q ss_pred CCCCCCCCCCCccc-ccccHHHHHHH-HHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcccc
Q 026829 1 MDYPGFGLSAGLHG-YIPSFDRLVDD-VIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 78 (232)
Q Consensus 1 ~D~~G~G~S~~~~~-~~~~~~~~~~d-~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~ 78 (232)
+|+||||.|+.+.. ...++++++++ +...+..+ ...+++|+||||||.+|+.+|.++|+.|++++++++...
T Consensus 33 ~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~ 106 (251)
T TIGR03695 33 IDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL------GIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPG 106 (251)
T ss_pred EcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc------CCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCC
Confidence 69999999976432 34578888888 44333332 234789999999999999999999999999999988654
Q ss_pred CCcCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCc---------hhhhhhcccccccCCcccHHHHHHHHH--H
Q 026829 79 IADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDL---------KNRELTKYNVIVYKDKPRLRTALELLK--T 147 (232)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~~~~--~ 147 (232)
.............. ......+... ....+........ ..................+...+.... .
T Consensus 107 ~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (251)
T TIGR03695 107 LATEEERAARRQND-EQLAQRFEQE---GLEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGK 182 (251)
T ss_pred cCchHhhhhhhhcc-hhhhhHHHhc---CccHHHHHHhcCceeeecccCChHHhHHHHHhcccccchHHHHHHHHhhhhc
Confidence 32111000000000 0000000000 0000000000000 000000000000000011111111110 0
Q ss_pred HHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHH
Q 026829 148 TEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWL 222 (232)
Q Consensus 148 ~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l 222 (232)
.....+.+.++++|+++++|++|..++ +..+.+.+. .+++++++++++||+++.|.|++ +.+.|.+||
T Consensus 183 ~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~--~~~~~~~~~~~~gH~~~~e~~~~----~~~~i~~~l 250 (251)
T TIGR03695 183 QPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKL--LPNLTLVIIANAGHNIHLENPEA----FAKILLAFL 250 (251)
T ss_pred ccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhc--CCCCcEEEEcCCCCCcCccChHH----HHHHHHHHh
Confidence 112234567899999999999998774 444544443 35789999999999999998875 566677776
No 38
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.87 E-value=3.8e-21 Score=149.48 Aligned_cols=203 Identities=22% Similarity=0.293 Sum_probs=106.1
Q ss_pred CCCCCCCCCCCccccc---ccHHHHHHHHHHHHHhhhcCCCCCCC-CeEEEecccchHHHHHHHhhCCCceeEEEEcCcc
Q 026829 1 MDYPGFGLSAGLHGYI---PSFDRLVDDVIEHYSNIKEYPEFRTL-PSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 76 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~~~~~-~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~ 76 (232)
+|+||+|+|.++.-.. ..-..+++.+. .++.-. ++ +.+|+||||||.+|..+|+++|++|++|||++|+
T Consensus 122 iDllG~G~SSRP~F~~d~~~~e~~fvesiE-~WR~~~------~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~ 194 (365)
T KOG4409|consen 122 IDLLGFGRSSRPKFSIDPTTAEKEFVESIE-QWRKKM------GLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPW 194 (365)
T ss_pred ecccCCCCCCCCCCCCCcccchHHHHHHHH-HHHHHc------CCcceeEeeccchHHHHHHHHHhChHhhceEEEeccc
Confidence 6999999998764211 12234554443 333221 22 5899999999999999999999999999999998
Q ss_pred ccCCcC-C-----C-C-hHHHHHHHHHHHhhcCCC--ccC-CC-CchhhHhhcCchh-----hh---hhcccccccCCcc
Q 026829 77 CKIADD-M-----V-P-PFLVKQILIGIANILPKH--KLV-PQ-KDLAEAAFRDLKN-----RE---LTKYNVIVYKDKP 136 (232)
Q Consensus 77 ~~~~~~-~-----~-~-~~~~~~~~~~~~~~~~~~--~~~-~~-~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~ 136 (232)
...... . . + .|. ...........|-. +.. |. ..+...+..+... .. +..|...+....+
T Consensus 195 Gf~~~~~~~~~~~~~~~~w~-~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~p 273 (365)
T KOG4409|consen 195 GFPEKPDSEPEFTKPPPEWY-KALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNP 273 (365)
T ss_pred ccccCCCcchhhcCCChHHH-hhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCC
Confidence 753321 1 1 1 121 11110000000000 000 00 0000000000000 00 0011111111222
Q ss_pred cHHHHHHH-HH----HHHHHHHhcCcCC--ccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChh
Q 026829 137 RLRTALEL-LK----TTEGIERRLEKVS--LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDD 209 (232)
Q Consensus 137 ~l~~~~~~-~~----~~~~~~~~l~~i~--~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~ 209 (232)
+-..++.. +. ..+-+.+.+..++ +|+++|+|++|-+= ......+........++.++++++||.++.|+|+.
T Consensus 274 sgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD-~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~ 352 (365)
T KOG4409|consen 274 SGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMD-KNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEF 352 (365)
T ss_pred cHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCccccc-chhHHHHHHHhhcccceEEEecCCCceeecCCHHH
Confidence 21111111 11 1122334455554 99999999999875 44444444433334689999999999999999987
Q ss_pred HHH
Q 026829 210 MII 212 (232)
Q Consensus 210 ~~~ 212 (232)
+.+
T Consensus 353 Fn~ 355 (365)
T KOG4409|consen 353 FNQ 355 (365)
T ss_pred HHH
Confidence 543
No 39
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.86 E-value=1.6e-21 Score=158.92 Aligned_cols=208 Identities=17% Similarity=0.182 Sum_probs=115.6
Q ss_pred CCCCC--CCCCCC----ccc-------ccccHHHHHHHHHHHHHhhhcCCCCCCCC-eEEEecccchHHHHHHHhhCCCc
Q 026829 1 MDYPG--FGLSAG----LHG-------YIPSFDRLVDDVIEHYSNIKEYPEFRTLP-SFLFGQSLGGAVALKVHLKQPNA 66 (232)
Q Consensus 1 ~D~~G--~G~S~~----~~~-------~~~~~~~~~~d~~~~~~~l~~~~~~~~~~-~~lvGhSmGg~ia~~~a~~~p~~ 66 (232)
+|+|| ||.|.. +.+ ...+++++++++.++++.+.. .+ ++|+||||||+||+.+|.++|++
T Consensus 78 ~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~l~G~S~Gg~ia~~~a~~~p~~ 151 (351)
T TIGR01392 78 SNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGI------EQIAAVVGGSMGGMQALEWAIDYPER 151 (351)
T ss_pred ecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCC------CCceEEEEECHHHHHHHHHHHHChHh
Confidence 69999 666642 111 124789999999888876521 24 89999999999999999999999
Q ss_pred eeEEEEcCccccCCcCCCChHHHHHHHHHHHhh--cCCCccC----CCCchh--hHh----hcCch--hhhhhccc----
Q 026829 67 WSGAILVAPMCKIADDMVPPFLVKQILIGIANI--LPKHKLV----PQKDLA--EAA----FRDLK--NRELTKYN---- 128 (232)
Q Consensus 67 v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~--~~~----~~~~~--~~~~~~~~---- 128 (232)
|+++|++++......... .+. .......... ....... +...+. ... +.... ........
T Consensus 152 v~~lvl~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 229 (351)
T TIGR01392 152 VRAIVVLATSARHSAWCI-AFN-EVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGE 229 (351)
T ss_pred hheEEEEccCCcCCHHHH-HHH-HHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCccccc
Confidence 999999998654221000 000 0000000000 0000000 000000 000 00000 00000000
Q ss_pred -----------cccc-----------CCcccHHHHHHHHHHH------HHHHHhcCcCCccEEEEeeCCCCccChhHHHH
Q 026829 129 -----------VIVY-----------KDKPRLRTALELLKTT------EGIERRLEKVSLPLLILHGENDTVTDPSVSKA 180 (232)
Q Consensus 129 -----------~~~~-----------~~~~~l~~~~~~~~~~------~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~ 180 (232)
...+ .+..........+... .++.+.+.+|++|+|+|+|++|.++|++.++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~ 309 (351)
T TIGR01392 230 SPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRE 309 (351)
T ss_pred ccccccCccchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHH
Confidence 0000 0000000000111111 12346788999999999999999999999998
Q ss_pred HHHHhcCCCccEE-----EcCCCccccccCCChhHHHHHHHHHHHHH
Q 026829 181 LYEKASSKDKKCI-----LYKDAFHSLLEGEPDDMIIRVFADIISWL 222 (232)
Q Consensus 181 ~~~~~~~~~~~~~-----~~~~~~H~~~~e~~~~~~~~~~~~i~~~l 222 (232)
+.+.++ +.+++ +++++||+++.|+|++ +.+.|.+||
T Consensus 310 ~a~~i~--~~~~~v~~~~i~~~~GH~~~le~p~~----~~~~l~~FL 350 (351)
T TIGR01392 310 LAKALP--AAGLRVTYVEIESPYGHDAFLVETDQ----VEELIRGFL 350 (351)
T ss_pred HHHHHh--hcCCceEEEEeCCCCCcchhhcCHHH----HHHHHHHHh
Confidence 888764 44443 5689999999999875 566677776
No 40
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.86 E-value=6.7e-21 Score=152.45 Aligned_cols=71 Identities=23% Similarity=0.229 Sum_probs=57.2
Q ss_pred CCCCCCCCCCCccc-ccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccc
Q 026829 1 MDYPGFGLSAGLHG-YIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 77 (232)
Q Consensus 1 ~D~~G~G~S~~~~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~ 77 (232)
+|+||||.|+.... ...+.+++++++..+++.+.. .+++++||||||.+++.++.++|++++++|++++..
T Consensus 59 ~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~------~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 59 FDQRGCGKSTPHACLEENTTWDLVADIEKLREKLGI------KNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred ECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCC------CCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 69999999986532 234677888888777665421 268999999999999999999999999999998754
No 41
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.85 E-value=1.3e-20 Score=154.53 Aligned_cols=191 Identities=23% Similarity=0.338 Sum_probs=113.8
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|..... ..+++++++++.+.++.+. ..+++|+||||||.+|+.+|.++|++++++|+++|.....
T Consensus 163 ~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~ 235 (371)
T PRK14875 163 LDLPGHGASSKAVG-AGSLDELAAAVLAFLDALG------IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGP 235 (371)
T ss_pred EcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHhcC------CccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCc
Confidence 69999999964322 3488899988887776542 2368999999999999999999999999999998864321
Q ss_pred cCCCChHHHHHHH---------HHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHH-----H
Q 026829 81 DDMVPPFLVKQIL---------IGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELL-----K 146 (232)
Q Consensus 81 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~ 146 (232)
. . .......+. ..+...+... ..+....... .. .+.........+..+ .
T Consensus 236 ~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~ 298 (371)
T PRK14875 236 E-I-NGDYIDGFVAAESRRELKPVLELLFADP-----ALVTRQMVED-----LL-----KYKRLDGVDDALRALADALFA 298 (371)
T ss_pred c-c-chhHHHHhhcccchhHHHHHHHHHhcCh-----hhCCHHHHHH-----HH-----HHhccccHHHHHHHHHHHhcc
Confidence 1 0 111100000 0000000000 0000000000 00 000000000000000 0
Q ss_pred ---HHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 147 ---TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 147 ---~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
...+....+.++++|+|+++|++|.++|++.++.+ . .+.++++++++||.++.|+|+. +.+.|.+||+
T Consensus 299 ~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l----~-~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~fl~ 369 (371)
T PRK14875 299 GGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL----P-DGVAVHVLPGAGHMPQMEAAAD----VNRLLAEFLG 369 (371)
T ss_pred CcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc----c-CCCeEEEeCCCCCChhhhCHHH----HHHHHHHHhc
Confidence 01123345678899999999999999988765433 2 3679999999999999998865 5666778876
Q ss_pred h
Q 026829 224 D 224 (232)
Q Consensus 224 ~ 224 (232)
+
T Consensus 370 ~ 370 (371)
T PRK14875 370 K 370 (371)
T ss_pred c
Confidence 4
No 42
>PRK13604 luxD acyl transferase; Provisional
Probab=99.85 E-value=1.6e-20 Score=146.76 Aligned_cols=172 Identities=16% Similarity=0.125 Sum_probs=105.7
Q ss_pred CCCCCC-CCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccC
Q 026829 1 MDYPGF-GLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 79 (232)
Q Consensus 1 ~D~~G~-G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~ 79 (232)
||++|| |.|++..... ++....+|+..++++++... ..++.|+||||||++|+.+|.+. .++++|+.+|...+
T Consensus 70 fD~rg~~GeS~G~~~~~-t~s~g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l 143 (307)
T PRK13604 70 YDSLHHVGLSSGTIDEF-TMSIGKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNL 143 (307)
T ss_pred ecCCCCCCCCCCccccC-cccccHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccH
Confidence 799998 9998754332 44445788888888887532 24699999999999997777643 38999999997642
Q ss_pred CcCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHH-H----HHHHHHHh
Q 026829 80 ADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELL-K----TTEGIERR 154 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~----~~~~~~~~ 154 (232)
. ..+... +...+.. ++...+.... .+. .+ ......++... . ......+.
T Consensus 144 ~------d~l~~~---~~~~~~~---~p~~~lp~~~----------d~~--g~--~l~~~~f~~~~~~~~~~~~~s~i~~ 197 (307)
T PRK13604 144 R------DTLERA---LGYDYLS---LPIDELPEDL----------DFE--GH--NLGSEVFVTDCFKHGWDTLDSTINK 197 (307)
T ss_pred H------HHHHHh---hhccccc---Cccccccccc----------ccc--cc--cccHHHHHHHHHhcCccccccHHHH
Confidence 1 111110 1100000 0000000000 000 00 00000000000 0 00112244
Q ss_pred cCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCcccccc
Q 026829 155 LEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE 204 (232)
Q Consensus 155 l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 204 (232)
++++++|+|+|||++|.+||++.++.+++++...++++++++|++|...+
T Consensus 198 ~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 198 MKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred HhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc
Confidence 66788999999999999999999999999876668999999999999975
No 43
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.85 E-value=2.1e-20 Score=147.02 Aligned_cols=197 Identities=17% Similarity=0.192 Sum_probs=108.8
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|........+++++++++.+.++.+.. ..+++|+||||||++++.++.++|++|+++|++++....
T Consensus 51 ~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~-----~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~- 124 (273)
T PLN02211 51 IDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPE-----NEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLK- 124 (273)
T ss_pred ecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCC-----CCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCC-
Confidence 69999999864333235899999998888775421 247999999999999999999999999999999774321
Q ss_pred cCCCChHHHHHHHHHHHhhcCC----CccCCCCchhhHhhcCchhhhhhcccccccCCccc-HHHHHHH-H-----HHH-
Q 026829 81 DDMVPPFLVKQILIGIANILPK----HKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPR-LRTALEL-L-----KTT- 148 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~-~-----~~~- 148 (232)
.......-.......+...... .............. ........ .|...+. ....... + ...
T Consensus 125 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (273)
T PLN02211 125 LGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAII-KKEFRRKI-----LYQMSPQEDSTLAAMLLRPGPILALR 198 (273)
T ss_pred CCCCHHHHHhccccchhhhccceeeeeccCCCCCCceeee-CHHHHHHH-----HhcCCCHHHHHHHHHhcCCcCccccc
Confidence 0100000000000000000000 00000000000000 00000000 0000000 0000000 0 000
Q ss_pred -HHHHHhcCcC-CccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHH
Q 026829 149 -EGIERRLEKV-SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMII 212 (232)
Q Consensus 149 -~~~~~~l~~i-~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~ 212 (232)
.........+ ++|+++|+|++|.++|++..+.+.+.++ ..+++.++ +||+++.++|++++.
T Consensus 199 ~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~--~~~~~~l~-~gH~p~ls~P~~~~~ 261 (273)
T PLN02211 199 SARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWP--PSQVYELE-SDHSPFFSTPFLLFG 261 (273)
T ss_pred cccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCC--ccEEEEEC-CCCCccccCHHHHHH
Confidence 0111123345 7999999999999999998888877653 56888997 899999999998654
No 44
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.85 E-value=1e-20 Score=177.86 Aligned_cols=213 Identities=20% Similarity=0.260 Sum_probs=122.1
Q ss_pred CCCCCCCCCCCcc-------cccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEc
Q 026829 1 MDYPGFGLSAGLH-------GYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILV 73 (232)
Q Consensus 1 ~D~~G~G~S~~~~-------~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ 73 (232)
+|+||||.|.... ....+++++++++.+.++.+. ..+++|+||||||+||+.++.++|++|+++|++
T Consensus 1403 ~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~------~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVli 1476 (1655)
T PLN02980 1403 IDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHIT------PGKVTLVGYSMGARIALYMALRFSDKIEGAVII 1476 (1655)
T ss_pred EcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhC------CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEE
Confidence 6999999997432 123478889998888877653 236899999999999999999999999999999
Q ss_pred CccccCCcCCCChHHHHHHH-HHHHhhcCCCccCCCCchhhHhhcC---------chhhhhhcccccccCCcccHHHHHH
Q 026829 74 APMCKIADDMVPPFLVKQIL-IGIANILPKHKLVPQKDLAEAAFRD---------LKNRELTKYNVIVYKDKPRLRTALE 143 (232)
Q Consensus 74 ap~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~l~~~~~ 143 (232)
++........ .+...... .......... ....+....+.. +....... ....-.....+...+.
T Consensus 1477 s~~p~~~~~~--~~~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~ 1550 (1655)
T PLN02980 1477 SGSPGLKDEV--ARKIRSAKDDSRARMLIDH---GLEIFLENWYSGELWKSLRNHPHFNKIVA-SRLLHKDVPSLAKLLS 1550 (1655)
T ss_pred CCCCccCchH--HHHHHhhhhhHHHHHHHhh---hHHHHHHHhccHHHhhhhccCHHHHHHHH-HHHhcCCHHHHHHHHH
Confidence 8654322110 00000000 0000000000 000000000000 00000000 0000000001111111
Q ss_pred HHH--HHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCC----------CccEEEcCCCccccccCCChhHH
Q 026829 144 LLK--TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSK----------DKKCILYKDAFHSLLEGEPDDMI 211 (232)
Q Consensus 144 ~~~--~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~H~~~~e~~~~~~ 211 (232)
.+. ...++.+.+.++++|+|+|+|++|.+++ ..+..+.+.+... ..++++++++||.++.|+|++
T Consensus 1551 ~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~-- 1627 (1655)
T PLN02980 1551 DLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLP-- 1627 (1655)
T ss_pred HhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHH--
Confidence 110 0123446688999999999999999885 5566666655321 258999999999999999985
Q ss_pred HHHHHHHHHHHHhhhccCC
Q 026829 212 IRVFADIISWLDDHSRSST 230 (232)
Q Consensus 212 ~~~~~~i~~~l~~~~~~~~ 230 (232)
+++.|.+||.+..+.++
T Consensus 1628 --f~~~I~~FL~~~~~~~~ 1644 (1655)
T PLN02980 1628 --VIRALRKFLTRLHNSST 1644 (1655)
T ss_pred --HHHHHHHHHHhccccCC
Confidence 67788899987666554
No 45
>PLN02511 hydrolase
Probab=99.85 E-value=1.6e-20 Score=154.53 Aligned_cols=216 Identities=12% Similarity=0.147 Sum_probs=112.6
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCc--eeEEEEcCcccc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNA--WSGAILVAPMCK 78 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~--v~~lil~ap~~~ 78 (232)
+|+||||.|....... ....+++|+.++++.+... +++.+++++||||||.|++.++.++|++ |++++++++...
T Consensus 135 ~d~rG~G~s~~~~~~~-~~~~~~~Dl~~~i~~l~~~--~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~ 211 (388)
T PLN02511 135 FNSRGCADSPVTTPQF-YSASFTGDLRQVVDHVAGR--YPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFD 211 (388)
T ss_pred EecCCCCCCCCCCcCE-EcCCchHHHHHHHHHHHHH--CCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcC
Confidence 5999999997532221 1235567777777777542 3455899999999999999999999987 788777665432
Q ss_pred CC--cC-CCC--hHHHHH-HHHHHHhhcCCCc-cC---CCCchhhHhhcCchhhhhhc-ccccccCCcccHHHHHHHHHH
Q 026829 79 IA--DD-MVP--PFLVKQ-ILIGIANILPKHK-LV---PQKDLAEAAFRDLKNRELTK-YNVIVYKDKPRLRTALELLKT 147 (232)
Q Consensus 79 ~~--~~-~~~--~~~~~~-~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~ 147 (232)
.. .. ... ...... +...+.+...... .. +................... .....+ ...... +.+.
T Consensus 212 l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~-gf~~~~---~yy~- 286 (388)
T PLN02511 212 LVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSF-GFKSVD---AYYS- 286 (388)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcC-CCCCHH---HHHH-
Confidence 10 00 000 000000 0001111100000 00 00000000000000000000 000000 000011 1111
Q ss_pred HHHHHHhcCcCCccEEEEeeCCCCccChhHH-HHHHHHhcCCCccEEEcCCCccccccCCChhHH--HHHHHHHHHHHHh
Q 026829 148 TEGIERRLEKVSLPLLILHGENDTVTDPSVS-KALYEKASSKDKKCILYKDAFHSLLEGEPDDMI--IRVFADIISWLDD 224 (232)
Q Consensus 148 ~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~--~~~~~~i~~~l~~ 224 (232)
.......+++|++|+|+|+|++|+++|+... ....+ ..++.++++++++||+.+.|.|+... .=+.+.+.+||..
T Consensus 287 ~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~--~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~ 364 (388)
T PLN02511 287 NSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIK--ANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEA 364 (388)
T ss_pred HcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHh--cCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHH
Confidence 1112356889999999999999999987654 22333 24689999999999999999886420 0023456667654
Q ss_pred hh
Q 026829 225 HS 226 (232)
Q Consensus 225 ~~ 226 (232)
..
T Consensus 365 ~~ 366 (388)
T PLN02511 365 LE 366 (388)
T ss_pred HH
Confidence 44
No 46
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.85 E-value=3.7e-20 Score=152.17 Aligned_cols=73 Identities=12% Similarity=0.123 Sum_probs=58.8
Q ss_pred HHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCC--CccEEEcC-CCccccccCCChhHHHHHHHHHHHHHHhhhc
Q 026829 151 IERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSK--DKKCILYK-DAFHSLLEGEPDDMIIRVFADIISWLDDHSR 227 (232)
Q Consensus 151 ~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~--~~~~~~~~-~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~ 227 (232)
+.+.+.+|++|||+|+|++|.++|++.++.+.+.+... ..++++++ ++||+++.|+|++ +.+.+.+||.+..+
T Consensus 301 ~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~----~~~~L~~FL~~~~~ 376 (379)
T PRK00175 301 LAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPR----YGRLVRAFLERAAR 376 (379)
T ss_pred HHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHH----HHHHHHHHHHhhhh
Confidence 45678899999999999999999999998888877431 12677774 9999999999875 67788888876543
No 47
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.84 E-value=1.4e-19 Score=148.07 Aligned_cols=70 Identities=13% Similarity=0.115 Sum_probs=58.3
Q ss_pred HHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcC--CCccEEEcCC-CccccccCCChhHHHHHHHHHHHHHHh
Q 026829 151 IERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASS--KDKKCILYKD-AFHSLLEGEPDDMIIRVFADIISWLDD 224 (232)
Q Consensus 151 ~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~-~~H~~~~e~~~~~~~~~~~~i~~~l~~ 224 (232)
+.+.+.++++|+|+|+|+.|.++|++.++.+.+.++. ++++++++++ +||..+.|+|++ +.+.|.+||++
T Consensus 315 l~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~----~~~~I~~FL~~ 387 (389)
T PRK06765 315 LEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHL----FEKKIYEFLNR 387 (389)
T ss_pred HHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHH----HHHHHHHHHcc
Confidence 4567888999999999999999999988888777642 3689999986 999999998875 66778888865
No 48
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.84 E-value=1.6e-19 Score=142.23 Aligned_cols=197 Identities=18% Similarity=0.218 Sum_probs=114.5
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCC-CCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRT-LPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 79 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~-~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~ 79 (232)
+|+||||.|.+.. .+++++.+|+.++++.++.. .++ .+++++||||||.+++.++.. +.+|+++|+++|....
T Consensus 63 ~Dl~G~G~S~~~~---~~~~~~~~d~~~~~~~l~~~--~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 63 FDYRGMGDSEGEN---LGFEGIDADIAAAIDAFREA--APHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRT 136 (274)
T ss_pred eCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHhh--CCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCC
Confidence 6999999997532 36778888988888887643 122 258999999999999999765 5689999999997542
Q ss_pred CcCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchh-----hhhhccccccc--CCcccHHHHHHHHHHHHHHH
Q 026829 80 ADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKN-----RELTKYNVIVY--KDKPRLRTALELLKTTEGIE 152 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~ 152 (232)
..... ........ ...... . ......+..... ..... ....+ ........ ...+++.
T Consensus 137 ~~~~~-~~~~~~~~--~~~~~~------~-~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~ 200 (274)
T TIGR03100 137 EAAQA-ASRIRHYY--LGQLLS------A-DFWRKLLSGEVNLGSSLRGLGD-ALLKARQKGDEVAHG-----GLAERMK 200 (274)
T ss_pred cccch-HHHHHHHH--HHHHhC------h-HHHHHhcCCCccHHHHHHHHHH-HHHhhhhcCCCcccc-----hHHHHHH
Confidence 22111 11111110 000000 0 000000000000 00000 00000 00000000 1233555
Q ss_pred HhcCcCCccEEEEeeCCCCccChhHH------HHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 153 RRLEKVSLPLLILHGENDTVTDPSVS------KALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 153 ~~l~~i~~PvLii~G~~D~~v~~~~~------~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
+.+..+++|+|++||+.|...+ ... ..+.+.+..++++++.+++++|++..|.+. +.+.+.|.+||+
T Consensus 201 ~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~---~~v~~~i~~wL~ 273 (274)
T TIGR03100 201 AGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWR---EWVAARTTEWLR 273 (274)
T ss_pred HHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHH---HHHHHHHHHHHh
Confidence 6677789999999999999864 221 233333444689999999999998665432 458889999995
No 49
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.81 E-value=2.5e-19 Score=145.93 Aligned_cols=217 Identities=15% Similarity=0.149 Sum_probs=117.9
Q ss_pred CCCCCCCCCCCcccccccHHHHHHH-HHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDD-VIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 79 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d-~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~ 79 (232)
+|++|+|.|+.. .++++++.+ +.++++.+... ....+++++||||||++++.++.++|++|+++|+++|...+
T Consensus 100 ~D~~g~g~s~~~----~~~~d~~~~~~~~~v~~l~~~--~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 100 IDWGYPDRADRY----LTLDDYINGYIDKCVDYICRT--SKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred EeCCCCCHHHhc----CCHHHHHHHHHHHHHHHHHHH--hCCCcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 589999987642 266777654 55556665542 12347999999999999999999999999999999987654
Q ss_pred CcCCCChHHHHHH--HHHHHhhc---CCC------c-cCCCCchhhHh------hcCchhh-hhhcccccccCCcc-cHH
Q 026829 80 ADDMVPPFLVKQI--LIGIANIL---PKH------K-LVPQKDLAEAA------FRDLKNR-ELTKYNVIVYKDKP-RLR 139 (232)
Q Consensus 80 ~~~~~~~~~~~~~--~~~~~~~~---~~~------~-~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~-~l~ 139 (232)
...........+. ........ |.. . ..|........ +.+.... .............+ ...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~ 253 (350)
T TIGR01836 174 ETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGE 253 (350)
T ss_pred CCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHH
Confidence 3211000000000 00000000 000 0 00000000000 0111000 00000000000000 011
Q ss_pred HHHHHHHHH---HHH----------HHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCC
Q 026829 140 TALELLKTT---EGI----------ERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGE 206 (232)
Q Consensus 140 ~~~~~~~~~---~~~----------~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~ 206 (232)
...+.+... ..+ ...+.++++|+|+++|++|.++|++.+..+++.+...++++++++ +||..+..+
T Consensus 254 ~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~ 332 (350)
T TIGR01836 254 AFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVS 332 (350)
T ss_pred HHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEEC
Confidence 111111110 000 012567899999999999999999999888887765567888888 567776655
Q ss_pred ChhHHHHHHHHHHHHHHhh
Q 026829 207 PDDMIIRVFADIISWLDDH 225 (232)
Q Consensus 207 ~~~~~~~~~~~i~~~l~~~ 225 (232)
++ ..+.+..+|.+||+++
T Consensus 333 ~~-~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 333 GK-AQKEVPPAIGKWLQAR 350 (350)
T ss_pred ch-hHhhhhHHHHHHHHhC
Confidence 54 3456899999999764
No 50
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.80 E-value=3.6e-18 Score=141.38 Aligned_cols=185 Identities=19% Similarity=0.240 Sum_probs=106.4
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||||.|.+... ..+...+..++++.+.. .......++.++||||||.+|+++|..+|++++++|+++|.....
T Consensus 228 ~D~pG~G~s~~~~~-~~d~~~~~~avld~l~~---~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~ 303 (414)
T PRK05077 228 IDMPSVGFSSKWKL-TQDSSLLHQAVLNALPN---VPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTL 303 (414)
T ss_pred ECCCCCCCCCCCCc-cccHHHHHHHHHHHHHh---CcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchh
Confidence 69999999975321 12334444455444432 222223478999999999999999999999999999999875311
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhc-CcCC
Q 026829 81 DDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRL-EKVS 159 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l-~~i~ 159 (232)
.. ...............+ .. .+.... .....+...+..+. . .....+ .+++
T Consensus 304 ~~--~~~~~~~~p~~~~~~l-----------a~-~lg~~~------------~~~~~l~~~l~~~s-l-~~~~~l~~~i~ 355 (414)
T PRK05077 304 LT--DPKRQQQVPEMYLDVL-----------AS-RLGMHD------------ASDEALRVELNRYS-L-KVQGLLGRRCP 355 (414)
T ss_pred hc--chhhhhhchHHHHHHH-----------HH-HhCCCC------------CChHHHHHHhhhcc-c-hhhhhhccCCC
Confidence 00 0000000000000000 00 000000 00000110000000 0 000112 5789
Q ss_pred ccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhh
Q 026829 160 LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 226 (232)
Q Consensus 160 ~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~ 226 (232)
+|+|+|||++|+++|++.++.+.+.. ++.++++++++ ++.+.++ +++..|.+||.++.
T Consensus 356 ~PvLiI~G~~D~ivP~~~a~~l~~~~--~~~~l~~i~~~---~~~e~~~----~~~~~i~~wL~~~l 413 (414)
T PRK05077 356 TPMLSGYWKNDPFSPEEDSRLIASSS--ADGKLLEIPFK---PVYRNFD----KALQEISDWLEDRL 413 (414)
T ss_pred CcEEEEecCCCCCCCHHHHHHHHHhC--CCCeEEEccCC---CccCCHH----HHHHHHHHHHHHHh
Confidence 99999999999999999988766543 58899999997 3334444 48899999998875
No 51
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.78 E-value=1.2e-18 Score=130.57 Aligned_cols=163 Identities=25% Similarity=0.387 Sum_probs=114.0
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|++|+|.|.|.... ....+|+.+++..++++.. +..+++|+|+|||...++.+|.+.| +.++||.+|.....
T Consensus 94 ~DYSGyG~S~G~psE----~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~ 166 (258)
T KOG1552|consen 94 YDYSGYGRSSGKPSE----RNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGM 166 (258)
T ss_pred EecccccccCCCccc----ccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhh
Confidence 699999999986543 2456677777777765432 3457999999999999999999998 89999999964311
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCc
Q 026829 81 DDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSL 160 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~ 160 (232)
+ -+.+. ... . ..+. .+. ..+....+++
T Consensus 167 r----------------v~~~~----------------~~~---~----~~~d----------~f~----~i~kI~~i~~ 193 (258)
T KOG1552|consen 167 R----------------VAFPD----------------TKT---T----YCFD----------AFP----NIEKISKITC 193 (258)
T ss_pred h----------------hhccC----------------cce---E----Eeec----------ccc----ccCcceeccC
Confidence 0 00110 000 0 0000 000 1245678899
Q ss_pred cEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhhccC
Q 026829 161 PLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRSS 229 (232)
Q Consensus 161 PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~~~ 229 (232)
|+|++||++|.++|..+...++++.+. ..+-.++.|+||.-.+- ..+ .+..+..|+.....++
T Consensus 194 PVLiiHgtdDevv~~sHg~~Lye~~k~-~~epl~v~g~gH~~~~~-~~~----yi~~l~~f~~~~~~~~ 256 (258)
T KOG1552|consen 194 PVLIIHGTDDEVVDFSHGKALYERCKE-KVEPLWVKGAGHNDIEL-YPE----YIEHLRRFISSVLPSQ 256 (258)
T ss_pred CEEEEecccCceecccccHHHHHhccc-cCCCcEEecCCCccccc-CHH----HHHHHHHHHHHhcccC
Confidence 999999999999999999999998753 35888999999997653 333 5566667776655544
No 52
>PRK10985 putative hydrolase; Provisional
Probab=99.77 E-value=3.7e-18 Score=137.59 Aligned_cols=213 Identities=15% Similarity=0.147 Sum_probs=106.9
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCc--eeEEEEcCcccc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNA--WSGAILVAPMCK 78 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~--v~~lil~ap~~~ 78 (232)
+|+||||.|.......... ...+|+..+++.+++. ++..+++++||||||.+++.++.++++. ++++|+++|...
T Consensus 93 ~d~rG~g~~~~~~~~~~~~-~~~~D~~~~i~~l~~~--~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 93 MHFRGCSGEPNRLHRIYHS-GETEDARFFLRWLQRE--FGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLM 169 (324)
T ss_pred EeCCCCCCCccCCcceECC-CchHHHHHHHHHHHHh--CCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCC
Confidence 5899999775321111111 1245655555555432 2345799999999999988887776544 888888877543
Q ss_pred CCcCCC--ChH---HHHHH-HHHHHhhcCC-CccCCCC-ch-hhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHH
Q 026829 79 IADDMV--PPF---LVKQI-LIGIANILPK-HKLVPQK-DL-AEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTE 149 (232)
Q Consensus 79 ~~~~~~--~~~---~~~~~-~~~~~~~~~~-~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 149 (232)
...... ... ..... ...+.+.... ....+.. .. ..........+..+......+. .+....+.+...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~---g~~~~~~~y~~~- 245 (324)
T PRK10985 170 LEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIH---GFADAIDYYRQC- 245 (324)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccC---CCCCHHHHHHHC-
Confidence 211000 000 00000 0001000000 0000000 00 0000000000000000000000 011112222211
Q ss_pred HHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCC----ChhHHHHHHHHHHHHHHhh
Q 026829 150 GIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGE----PDDMIIRVFADIISWLDDH 225 (232)
Q Consensus 150 ~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~----~~~~~~~~~~~i~~~l~~~ 225 (232)
...+.++++++|+|+|+|++|++++++....+.+. .++.++++++++||+.+.|. +... .-+.+.+|+...
T Consensus 246 ~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~--~~~~~~~~~~~~GH~~~~~g~~~~~~~w---~~~~~~~~~~~~ 320 (324)
T PRK10985 246 SALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESL--PPNVEYQLTEHGGHVGFVGGTLLKPQMW---LEQRIPDWLTTY 320 (324)
T ss_pred ChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHh--CCCeEEEECCCCCceeeCCCCCCCCCcc---HHHHHHHHHHHh
Confidence 23356789999999999999999988776655433 35789999999999999874 2223 234466777554
No 53
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.76 E-value=2.3e-17 Score=128.08 Aligned_cols=211 Identities=17% Similarity=0.191 Sum_probs=121.8
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccch-HHHHHHHhhCCCceeEEEEcCccccC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGG-AVALKVHLKQPNAWSGAILVAPMCKI 79 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg-~ia~~~a~~~p~~v~~lil~ap~~~~ 79 (232)
+|.|-||.|.....+ +.+.+++|+..+++..... +...+++|+|||||| .+++..++..|+.+..+|++--.+..
T Consensus 86 vd~RnHG~Sp~~~~h--~~~~ma~dv~~Fi~~v~~~--~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~ 161 (315)
T KOG2382|consen 86 VDVRNHGSSPKITVH--NYEAMAEDVKLFIDGVGGS--TRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGG 161 (315)
T ss_pred EecccCCCCcccccc--CHHHHHHHHHHHHHHcccc--cccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCcc
Confidence 489999999876665 6889999999998876532 224589999999999 88888888999999999886322211
Q ss_pred CcCCCChHHHHHHHHHHHhhcCCCccC-CCCchhhHhhc---Cchhhhhhccc--------ccccCCcccHHHHHHHHHH
Q 026829 80 ADDMVPPFLVKQILIGIANILPKHKLV-PQKDLAEAAFR---DLKNRELTKYN--------VIVYKDKPRLRTALELLKT 147 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~ 147 (232)
.... ..-....+..+...-...... ..+.....+.+ +.........+ ...|. ..+....+++..
T Consensus 162 ~~~~--~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~--~nl~~i~~~~~~ 237 (315)
T KOG2382|consen 162 VGRS--YGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWR--VNLDSIASLLDE 237 (315)
T ss_pred CCcc--cchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEE--eCHHHHHHHHHH
Confidence 1110 001111121111110000000 01111111100 00000000000 01111 112333333332
Q ss_pred HHH--HHHhc--CcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 148 TEG--IERRL--EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 148 ~~~--~~~~l--~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
... ....+ .....|||++.|.+++.++.+.-..+.+.+ +..+++.++++||++|.|+|++ +++.|.+|+.
T Consensus 238 ~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~f--p~~e~~~ld~aGHwVh~E~P~~----~~~~i~~Fl~ 311 (315)
T KOG2382|consen 238 YEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIF--PNVEVHELDEAGHWVHLEKPEE----FIESISEFLE 311 (315)
T ss_pred HHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhc--cchheeecccCCceeecCCHHH----HHHHHHHHhc
Confidence 211 11122 567899999999999999887665554433 5799999999999999999987 5667777776
Q ss_pred hh
Q 026829 224 DH 225 (232)
Q Consensus 224 ~~ 225 (232)
++
T Consensus 312 ~~ 313 (315)
T KOG2382|consen 312 EP 313 (315)
T ss_pred cc
Confidence 54
No 54
>PRK05855 short chain dehydrogenase; Validated
Probab=99.74 E-value=3.6e-17 Score=141.67 Aligned_cols=63 Identities=17% Similarity=0.149 Sum_probs=49.4
Q ss_pred cCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHh
Q 026829 155 LEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 224 (232)
Q Consensus 155 l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~ 224 (232)
+..+++|+|+|+|++|.++|+...+.+.+.+ ++.++++++ +||+++.|+|+. +.+.|.+|++.
T Consensus 229 ~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~--~~~~~~~~~-~gH~~~~e~p~~----~~~~i~~fl~~ 291 (582)
T PRK05855 229 ERYTDVPVQLIVPTGDPYVRPALYDDLSRWV--PRLWRREIK-AGHWLPMSHPQV----LAAAVAEFVDA 291 (582)
T ss_pred cCCccCceEEEEeCCCcccCHHHhccccccC--CcceEEEcc-CCCcchhhChhH----HHHHHHHHHHh
Confidence 4558999999999999999988777665443 467787776 689999999976 45566677764
No 55
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.73 E-value=6.1e-18 Score=123.07 Aligned_cols=173 Identities=27% Similarity=0.404 Sum_probs=121.2
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+++||+|+|+|.. +-+.+.-|..++++++..+++....+++|+|.|+||++|+.+|.++.+++.++|+.++...+.
T Consensus 112 vsYRGYG~S~Gsp----sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp 187 (300)
T KOG4391|consen 112 VSYRGYGKSEGSP----SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIP 187 (300)
T ss_pred EEeeccccCCCCc----cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccch
Confidence 4789999999854 224455577777888887777666789999999999999999999999999999998875432
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCc
Q 026829 81 DDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSL 160 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~ 160 (232)
..+.|. ++| ++.+.+... ++ +....-.+.+.+-.+
T Consensus 188 ~~~i~~------------v~p----~~~k~i~~l----------------c~-------------kn~~~S~~ki~~~~~ 222 (300)
T KOG4391|consen 188 HMAIPL------------VFP----FPMKYIPLL----------------CY-------------KNKWLSYRKIGQCRM 222 (300)
T ss_pred hhhhhe------------ecc----chhhHHHHH----------------HH-------------HhhhcchhhhccccC
Confidence 211110 000 000000000 10 000001123456789
Q ss_pred cEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhhc
Q 026829 161 PLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSR 227 (232)
Q Consensus 161 PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~ 227 (232)
|.|+|.|.+|.+|||.+.+.+++..++..+++..+|++.|.-..-+ + -.++.|-+||.+...
T Consensus 223 P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~-d----GYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 223 PFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWIC-D----GYFQAIEDFLAEVVK 284 (300)
T ss_pred ceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEe-c----cHHHHHHHHHHHhcc
Confidence 9999999999999999999999988777899999999999765422 2 267778888877654
No 56
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.72 E-value=1.6e-16 Score=120.73 Aligned_cols=166 Identities=20% Similarity=0.285 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhh
Q 026829 20 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANI 99 (232)
Q Consensus 20 ~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~ 99 (232)
...++|+++.++.+.+........+.|+|||+||.+++.++.++|+++++++..+|+....... ..
T Consensus 42 ~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~--~~------------ 107 (213)
T PF00326_consen 42 QADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFKAAVAGAGVSDLFSYY--GT------------ 107 (213)
T ss_dssp HHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEEEEESE-SSTTCSB--HH------------
T ss_pred ccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceeeeeeeccceecchhccc--cc------------
Confidence 3457788888888865432223368999999999999999999999999999998875432111 00
Q ss_pred cCCCccCCCCchhh-HhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCc--CCccEEEEeeCCCCccChh
Q 026829 100 LPKHKLVPQKDLAE-AAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEK--VSLPLLILHGENDTVTDPS 176 (232)
Q Consensus 100 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~--i~~PvLii~G~~D~~v~~~ 176 (232)
... +.. .... +........ .+..... ...+.+ ++.|+||+||++|.+||+.
T Consensus 108 -------~~~-~~~~~~~~--------------~~~~~~~~~---~~~~~s~-~~~~~~~~~~~P~li~hG~~D~~Vp~~ 161 (213)
T PF00326_consen 108 -------TDI-YTKAEYLE--------------YGDPWDNPE---FYRELSP-ISPADNVQIKPPVLIIHGENDPRVPPS 161 (213)
T ss_dssp -------TCC-HHHGHHHH--------------HSSTTTSHH---HHHHHHH-GGGGGGCGGGSEEEEEEETTBSSSTTH
T ss_pred -------ccc-cccccccc--------------cCccchhhh---hhhhhcc-ccccccccCCCCEEEEccCCCCccCHH
Confidence 000 000 0000 000000000 1111111 123344 8899999999999999999
Q ss_pred HHHHHHHHhcC--CCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhhcc
Q 026829 177 VSKALYEKASS--KDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRS 228 (232)
Q Consensus 177 ~~~~~~~~~~~--~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~~ 228 (232)
.+..+++++.. .+.+++++++++|.... ++. ...+...+.+||++++..
T Consensus 162 ~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~--~~~-~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 162 QSLRLYNALRKAGKPVELLIFPGEGHGFGN--PEN-RRDWYERILDFFDKYLKK 212 (213)
T ss_dssp HHHHHHHHHHHTTSSEEEEEETT-SSSTTS--HHH-HHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHhcCCCEEEEEcCcCCCCCCC--chh-HHHHHHHHHHHHHHHcCC
Confidence 99888877643 45899999999995543 333 236889999999988753
No 57
>PRK10566 esterase; Provisional
Probab=99.72 E-value=4.6e-16 Score=120.87 Aligned_cols=65 Identities=23% Similarity=0.429 Sum_probs=51.2
Q ss_pred hcCcC-CccEEEEeeCCCCccChhHHHHHHHHhcCC----CccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhh
Q 026829 154 RLEKV-SLPLLILHGENDTVTDPSVSKALYEKASSK----DKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 226 (232)
Q Consensus 154 ~l~~i-~~PvLii~G~~D~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~ 226 (232)
.+.++ ++|+|++||++|.++|++.+..+.+++... +.++++++|++|.+. + ..+..+++||++++
T Consensus 180 ~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~-----~~~~~~~~fl~~~~ 249 (249)
T PRK10566 180 QLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---P-----EALDAGVAFFRQHL 249 (249)
T ss_pred hhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---H-----HHHHHHHHHHHhhC
Confidence 34555 799999999999999999998888776432 357788999999863 2 26788999998753
No 58
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.70 E-value=1e-16 Score=115.55 Aligned_cols=187 Identities=17% Similarity=0.154 Sum_probs=112.5
Q ss_pred CCCCCCCCCCCccccc--ccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcccc
Q 026829 1 MDYPGFGLSAGLHGYI--PSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 78 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~--~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~ 78 (232)
+|-||+|.|..+.... .-|..=+++.++.+..|+. .|+.|+|||=||..|+.+|+++++.|+.+|+.+....
T Consensus 77 wDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~------~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ay 150 (277)
T KOG2984|consen 77 WDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALKL------EPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAY 150 (277)
T ss_pred ECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhCC------CCeeEeeecCCCeEEEEeeccChhhhhhheeecccce
Confidence 5889999997654321 1233334445555554432 2678999999999999999999999999999876554
Q ss_pred CCcCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHH----HHHHHHH-----
Q 026829 79 IADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTAL----ELLKTTE----- 149 (232)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~----- 149 (232)
+.... ....+.+.-.+++.++.. .+. ...|. ...+++.+ +......
T Consensus 151 vn~~~---~ma~kgiRdv~kWs~r~R-------------~P~---e~~Yg------~e~f~~~wa~wvD~v~qf~~~~dG 205 (277)
T KOG2984|consen 151 VNHLG---AMAFKGIRDVNKWSARGR-------------QPY---EDHYG------PETFRTQWAAWVDVVDQFHSFCDG 205 (277)
T ss_pred ecchh---HHHHhchHHHhhhhhhhc-------------chH---HHhcC------HHHHHHHHHHHHHHHHHHhhcCCC
Confidence 33211 011111122222222110 000 00010 11111111 1111110
Q ss_pred -HHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHh
Q 026829 150 -GIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 224 (232)
Q Consensus 150 -~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~ 224 (232)
--+..+.+++||+||+||++|++++..+.-.+-.. .+.+++++++.++|.++..-++ .++..+.+||++
T Consensus 206 ~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~--~~~a~~~~~peGkHn~hLrya~----eFnklv~dFl~~ 275 (277)
T KOG2984|consen 206 RFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVL--KSLAKVEIHPEGKHNFHLRYAK----EFNKLVLDFLKS 275 (277)
T ss_pred chHhhhcccccCCeeEeeCCcCCCCCCCCccchhhh--cccceEEEccCCCcceeeechH----HHHHHHHHHHhc
Confidence 11345889999999999999999987665444433 2578999999999999985444 367777888875
No 59
>PRK11071 esterase YqiA; Provisional
Probab=99.69 E-value=5.2e-16 Score=115.51 Aligned_cols=144 Identities=22% Similarity=0.186 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhhc
Q 026829 21 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANIL 100 (232)
Q Consensus 21 ~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (232)
++++++.++++.+. ..+++|+||||||.+|+.+|.++|. ++|+++|... +.. .+ ....
T Consensus 46 ~~~~~l~~l~~~~~------~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~------~~~----~~---~~~~ 103 (190)
T PRK11071 46 DAAELLESLVLEHG------GDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVR------PFE----LL---TDYL 103 (190)
T ss_pred HHHHHHHHHHHHcC------CCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCC------HHH----HH---HHhc
Confidence 44555555554321 2368999999999999999999984 4688888542 111 11 1111
Q ss_pred CCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHHHH
Q 026829 101 PKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKA 180 (232)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~ 180 (232)
... ... ... . .+.-. +..++..... ++ ..+. ..+|+++|||++|++||++.+.+
T Consensus 104 ~~~---~~~-----~~~----------~--~~~~~---~~~~~d~~~~-~~-~~i~-~~~~v~iihg~~De~V~~~~a~~ 157 (190)
T PRK11071 104 GEN---ENP-----YTG----------Q--QYVLE---SRHIYDLKVM-QI-DPLE-SPDLIWLLQQTGDEVLDYRQAVA 157 (190)
T ss_pred CCc---ccc-----cCC----------C--cEEEc---HHHHHHHHhc-CC-ccCC-ChhhEEEEEeCCCCcCCHHHHHH
Confidence 000 000 000 0 00000 1111111111 11 1233 67889999999999999999988
Q ss_pred HHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 181 LYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
+++. +++++++|++|..... ++++..|.+|+.
T Consensus 158 ~~~~-----~~~~~~~ggdH~f~~~------~~~~~~i~~fl~ 189 (190)
T PRK11071 158 YYAA-----CRQTVEEGGNHAFVGF------ERYFNQIVDFLG 189 (190)
T ss_pred HHHh-----cceEEECCCCcchhhH------HHhHHHHHHHhc
Confidence 8863 4677889999998432 347788888874
No 60
>PLN02872 triacylglycerol lipase
Probab=99.69 E-value=9.9e-16 Score=125.62 Aligned_cols=219 Identities=17% Similarity=0.279 Sum_probs=121.4
Q ss_pred CCCCCCCCCCCc-------ccc-cccHHHHH-HHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCC---cee
Q 026829 1 MDYPGFGLSAGL-------HGY-IPSFDRLV-DDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN---AWS 68 (232)
Q Consensus 1 ~D~~G~G~S~~~-------~~~-~~~~~~~~-~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~---~v~ 68 (232)
+|+||+|.|.+. ... ..+|++++ .|+.++++++.+. .+.+++++||||||.+++.++ .+|+ +|+
T Consensus 113 ~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~---~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~ 188 (395)
T PLN02872 113 GNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSI---TNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVE 188 (395)
T ss_pred ccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhc---cCCceEEEEECHHHHHHHHHh-hChHHHHHHH
Confidence 589998866331 111 13788888 6898888887542 134799999999999998554 6787 688
Q ss_pred EEEEcCccccCCcCCCChHHHHHHHH----HHHhhcCCCccCCCCchhh----HhhcCch---h-h-hh----hcccc--
Q 026829 69 GAILVAPMCKIADDMVPPFLVKQILI----GIANILPKHKLVPQKDLAE----AAFRDLK---N-R-EL----TKYNV-- 129 (232)
Q Consensus 69 ~lil~ap~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~---~-~-~~----~~~~~-- 129 (232)
++++++|....... ..+.. ..... .+...+...++.+...... ..+.... . . .. ...|.
T Consensus 189 ~~~~l~P~~~~~~~-~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~ 266 (395)
T PLN02872 189 AAALLCPISYLDHV-TAPLV-LRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASR 266 (395)
T ss_pred HHHHhcchhhhccC-CCHHH-HHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhh
Confidence 89999998764321 12221 11110 1111122222222211111 1111000 0 0 00 00000
Q ss_pred ----ccc-CCcccHHHH---HHHHHH----------HHHH---------HHhcCcC--CccEEEEeeCCCCccChhHHHH
Q 026829 130 ----IVY-KDKPRLRTA---LELLKT----------TEGI---------ERRLEKV--SLPLLILHGENDTVTDPSVSKA 180 (232)
Q Consensus 130 ----~~~-~~~~~l~~~---~~~~~~----------~~~~---------~~~l~~i--~~PvLii~G~~D~~v~~~~~~~ 180 (232)
..+ ....+++.. .++++. ..+. .-.+.++ ++|+++++|++|.+++++.+..
T Consensus 267 ~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~ 346 (395)
T PLN02872 267 IDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEH 346 (395)
T ss_pred hhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHH
Confidence 000 011112221 122211 0011 1135666 5899999999999999998888
Q ss_pred HHHHhcCCCccEEEcCCCccccc---cCCChhHHHHHHHHHHHHHHhhhccCC
Q 026829 181 LYEKASSKDKKCILYKDAFHSLL---EGEPDDMIIRVFADIISWLDDHSRSST 230 (232)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~H~~~---~e~~~~~~~~~~~~i~~~l~~~~~~~~ 230 (232)
+.+.+.. ..+++.+++++|..+ .|.|+ .+++.|++|++++...++
T Consensus 347 l~~~Lp~-~~~l~~l~~~gH~dfi~~~eape----~V~~~Il~fL~~~~~~~~ 394 (395)
T PLN02872 347 TLAELPS-KPELLYLENYGHIDFLLSTSAKE----DVYNHMIQFFRSLGKSSS 394 (395)
T ss_pred HHHHCCC-ccEEEEcCCCCCHHHHhCcchHH----HHHHHHHHHHHHhhhccC
Confidence 8877653 368889999999733 34443 488899999987665544
No 61
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.66 E-value=1.9e-15 Score=116.55 Aligned_cols=68 Identities=31% Similarity=0.433 Sum_probs=52.0
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 77 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~ 77 (232)
+|+||||.|. .. ..+...+++++..+++.+.. .+++++||||||.+++.++.++|++++++|++++..
T Consensus 56 ~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~~~------~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 56 PDLRGHGRSD-PA--GYSLSAYADDLAALLDALGL------EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred ecccCCCCCC-cc--cccHHHHHHHHHHHHHHhCC------CceEEEEecccHHHHHHHHHhcchhhheeeEecCCC
Confidence 5999999997 11 12334446666666664421 248999999999999999999999999999998754
No 62
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.63 E-value=2.4e-15 Score=126.82 Aligned_cols=54 Identities=17% Similarity=0.126 Sum_probs=46.4
Q ss_pred HhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCCh
Q 026829 153 RRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPD 208 (232)
Q Consensus 153 ~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~ 208 (232)
..+..|++|+|+|+|++|.++|++.+..+.+.+. +.+.++++++||.++.++|.
T Consensus 409 ~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~--~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 409 LDLSKVKVPVYIIATREDHIAPWQSAYRGAALLG--GPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred cchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCC--CCEEEEECCCCCchHhhCCC
Confidence 3577899999999999999999998888776653 67788999999999988775
No 63
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.59 E-value=3.5e-14 Score=106.12 Aligned_cols=191 Identities=18% Similarity=0.222 Sum_probs=107.0
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCC---CceeEEEEcCccc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQP---NAWSGAILVAPMC 77 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p---~~v~~lil~ap~~ 77 (232)
+.+||+|.--+. ....+++.+++.+...+.. -..+.|..++||||||++|.++|.+.. -..+++.+++...
T Consensus 39 vqlPGR~~r~~e-p~~~di~~Lad~la~el~~-----~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~a 112 (244)
T COG3208 39 VQLPGRGDRFGE-PLLTDIESLADELANELLP-----PLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRA 112 (244)
T ss_pred ecCCCcccccCC-cccccHHHHHHHHHHHhcc-----ccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCC
Confidence 368999864322 2345888888888776652 123568999999999999999986532 1256777765321
Q ss_pred cCCc--CCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhc
Q 026829 78 KIAD--DMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRL 155 (232)
Q Consensus 78 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l 155 (232)
.... .......-..++..+..+.. ....++.|+.-+.. --+.+++.+....+++. ..-
T Consensus 113 P~~~~~~~i~~~~D~~~l~~l~~lgG---------~p~e~led~El~~l---------~LPilRAD~~~~e~Y~~--~~~ 172 (244)
T COG3208 113 PHYDRGKQIHHLDDADFLADLVDLGG---------TPPELLEDPELMAL---------FLPILRADFRALESYRY--PPP 172 (244)
T ss_pred CCCcccCCccCCCHHHHHHHHHHhCC---------CChHHhcCHHHHHH---------HHHHHHHHHHHhccccc--CCC
Confidence 1000 00000000111111111100 00112222221110 01234443333333322 123
Q ss_pred CcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 156 EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 156 ~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
..++||+..+-|++|+.+..+....+.+..+ ...++.+++|+ |+..+++.++ +...|.+.++
T Consensus 173 ~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~-~~f~l~~fdGg-HFfl~~~~~~----v~~~i~~~l~ 234 (244)
T COG3208 173 APLACPIHAFGGEKDHEVSRDELGAWREHTK-GDFTLRVFDGG-HFFLNQQREE----VLARLEQHLA 234 (244)
T ss_pred CCcCcceEEeccCcchhccHHHHHHHHHhhc-CCceEEEecCc-ceehhhhHHH----HHHHHHHHhh
Confidence 5789999999999999999888877766654 47899999975 9988866554 4445555553
No 64
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.59 E-value=5.4e-14 Score=128.45 Aligned_cols=72 Identities=17% Similarity=0.243 Sum_probs=57.2
Q ss_pred hcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccE-EEcCCCccccccCCChhHHHHHHHHHHHHHHhhhcc
Q 026829 154 RLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKC-ILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRS 228 (232)
Q Consensus 154 ~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~~ 228 (232)
.+.+|++|+|+|||++|.++|++.++.+.+.+ ++.++ ++++++||+.+.--. ...+.+...+.+||.++...
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i--~~a~~~~~~~~~GH~g~~~g~-~a~~~~wp~i~~wl~~~~~~ 364 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPASVRGIRRAA--PNAEVYESLIRAGHFGLVVGS-RAAQQTWPTVADWVKWLEGD 364 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHHHHHHHHhC--CCCeEEEEeCCCCCEeeeech-hhhhhhChHHHHHHHHhccC
Confidence 36789999999999999999999998887765 46676 688999999876322 23445788899999987644
No 65
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.56 E-value=2.4e-14 Score=101.82 Aligned_cols=114 Identities=30% Similarity=0.500 Sum_probs=80.5
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||+|.+.+. ...+++++++. .... ...+++|+||||||.+++.++.+. .+++++|+++|..
T Consensus 32 ~~~~~~~~~~~~----~~~~~~~~~~~----~~~~----~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~--- 95 (145)
T PF12695_consen 32 FDYPGHGDSDGA----DAVERVLADIR----AGYP----DPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYP--- 95 (145)
T ss_dssp ESCTTSTTSHHS----HHHHHHHHHHH----HHHC----TCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESS---
T ss_pred EecCCCCccchh----HHHHHHHHHHH----hhcC----CCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCcc---
Confidence 478898888432 13333343332 1111 123799999999999999999988 6899999988820
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCc
Q 026829 81 DDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSL 160 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~ 160 (232)
.. +.+...++
T Consensus 96 -----~~-----------------------------------------------------------------~~~~~~~~ 105 (145)
T PF12695_consen 96 -----DS-----------------------------------------------------------------EDLAKIRI 105 (145)
T ss_dssp -----GC-----------------------------------------------------------------HHHTTTTS
T ss_pred -----ch-----------------------------------------------------------------hhhhccCC
Confidence 00 00112334
Q ss_pred cEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccc
Q 026829 161 PLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHS 201 (232)
Q Consensus 161 PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 201 (232)
|+++++|++|.+++++..+.+++++. .++++++++|++|+
T Consensus 106 pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 106 PVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGHF 145 (145)
T ss_dssp EEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-TT
T ss_pred cEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcCc
Confidence 99999999999999999999988876 57899999999995
No 66
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.52 E-value=1.4e-13 Score=104.19 Aligned_cols=200 Identities=15% Similarity=0.165 Sum_probs=105.8
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhh--CCCceeEEEEcCcccc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK--QPNAWSGAILVAPMCK 78 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~--~p~~v~~lil~ap~~~ 78 (232)
+|+||||.|.-.....-+.+.++.|+.+.+..+-.. ..-+++||||||||+||...|.. -|. +.|++++.-+-+
T Consensus 108 ~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEg 183 (343)
T KOG2564|consen 108 LDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEG 183 (343)
T ss_pred eeccccCccccCChhhcCHHHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEech
Confidence 599999998644443347888999998888776421 12368999999999999888764 355 788887653211
Q ss_pred CCcCCCChHHHHHHHHHHHhhcCCCccCCCCchhh--------HhhcCchhhhh-----hcccc--cccCCcccH---HH
Q 026829 79 IADDMVPPFLVKQILIGIANILPKHKLVPQKDLAE--------AAFRDLKNREL-----TKYNV--IVYKDKPRL---RT 140 (232)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~--~~~~~~~~l---~~ 140 (232)
.+...+..+...+..++.. .+.+.+ ...++....+. ..+.. .+|.....+ ..
T Consensus 184 ---------tAmeAL~~m~~fL~~rP~~-F~Si~~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~ 253 (343)
T KOG2564|consen 184 ---------TAMEALNSMQHFLRNRPKS-FKSIEDAIEWHVRSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQ 253 (343)
T ss_pred ---------HHHHHHHHHHHHHhcCCcc-ccchhhHHHHHhccccccccccceEecchheeeccCCCcEEEEeeccccch
Confidence 0111111122211111000 000000 00111100000 00000 011111111 11
Q ss_pred HHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHH
Q 026829 141 ALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIIS 220 (232)
Q Consensus 141 ~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~ 220 (232)
++ ...++.+.+..-...+|-|+|....|.+-..-. .-+.. ...++.+++.+||+++++.|.+ +...+.+
T Consensus 254 YW--~gWF~gLS~~Fl~~p~~klLilAg~d~LDkdLt---iGQMQ--Gk~Q~~vL~~~GH~v~ED~P~k----va~~~~~ 322 (343)
T KOG2564|consen 254 YW--KGWFKGLSDKFLGLPVPKLLILAGVDRLDKDLT---IGQMQ--GKFQLQVLPLCGHFVHEDSPHK----VAECLCV 322 (343)
T ss_pred hH--HHHHhhhhhHhhCCCccceeEEecccccCccee---eeeec--cceeeeeecccCceeccCCcch----HHHHHHH
Confidence 11 122334444555678888888888887542111 11221 2468999999999999999987 4445666
Q ss_pred HHHhh
Q 026829 221 WLDDH 225 (232)
Q Consensus 221 ~l~~~ 225 (232)
|...+
T Consensus 323 f~~Rn 327 (343)
T KOG2564|consen 323 FWIRN 327 (343)
T ss_pred HHhhh
Confidence 65444
No 67
>PRK11460 putative hydrolase; Provisional
Probab=99.49 E-value=5.2e-13 Score=102.58 Aligned_cols=127 Identities=18% Similarity=0.185 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhhc
Q 026829 21 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANIL 100 (232)
Q Consensus 21 ~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (232)
+.++.+.+.++.+.........+++|+||||||.+++.++.++|+.+.+++..++.. +
T Consensus 82 ~~~~~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~-------~--------------- 139 (232)
T PRK11460 82 AIMPTFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY-------A--------------- 139 (232)
T ss_pred HHHHHHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc-------c---------------
Confidence 334444455554433222223468999999999999999999998777776544310 0
Q ss_pred CCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHHHH
Q 026829 101 PKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKA 180 (232)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~ 180 (232)
. .+. ....+.|+|++||++|+++|++.++.
T Consensus 140 -~---~~~----------------------------------------------~~~~~~pvli~hG~~D~vvp~~~~~~ 169 (232)
T PRK11460 140 -S---LPE----------------------------------------------TAPTATTIHLIHGGEDPVIDVAHAVA 169 (232)
T ss_pred -c---ccc----------------------------------------------cccCCCcEEEEecCCCCccCHHHHHH
Confidence 0 000 00136899999999999999998888
Q ss_pred HHHHhcC--CCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhhc
Q 026829 181 LYEKASS--KDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSR 227 (232)
Q Consensus 181 ~~~~~~~--~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~ 227 (232)
+.+.+.. .+++++++++++|.+..+ .+.++.+||.+...
T Consensus 170 ~~~~L~~~g~~~~~~~~~~~gH~i~~~--------~~~~~~~~l~~~l~ 210 (232)
T PRK11460 170 AQEALISLGGDVTLDIVEDLGHAIDPR--------LMQFALDRLRYTVP 210 (232)
T ss_pred HHHHHHHCCCCeEEEEECCCCCCCCHH--------HHHHHHHHHHHHcc
Confidence 7776542 356888999999998531 45566677776654
No 68
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.48 E-value=5e-13 Score=101.68 Aligned_cols=131 Identities=21% Similarity=0.311 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHh
Q 026829 19 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIAN 98 (232)
Q Consensus 19 ~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~ 98 (232)
+.+.++.+.++++...+. ..+..+++|.|.|.||++|+.+++++|+.+.|+|.++......
T Consensus 83 i~~s~~~l~~li~~~~~~-~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~------------------ 143 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAY-GIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPE------------------ 143 (216)
T ss_dssp HHHHHHHHHHHHHHHHHT-T--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTG------------------
T ss_pred HHHHHHHHHHHHHHHHHc-CCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccc------------------
Confidence 334444444444443322 1233469999999999999999999999999999887642100
Q ss_pred hcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHH
Q 026829 99 ILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVS 178 (232)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~ 178 (232)
. ... . .. .... ++|++++||++|+++|.+.+
T Consensus 144 ---------~-~~~---------------~---------------------~~-~~~~--~~pi~~~hG~~D~vvp~~~~ 174 (216)
T PF02230_consen 144 ---------S-ELE---------------D---------------------RP-EALA--KTPILIIHGDEDPVVPFEWA 174 (216)
T ss_dssp ---------C-CCH---------------C---------------------CH-CCCC--TS-EEEEEETT-SSSTHHHH
T ss_pred ---------c-ccc---------------c---------------------cc-cccC--CCcEEEEecCCCCcccHHHH
Confidence 0 000 0 00 0111 79999999999999998877
Q ss_pred HHHHHHhcC--CCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhh
Q 026829 179 KALYEKASS--KDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 225 (232)
Q Consensus 179 ~~~~~~~~~--~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~ 225 (232)
+...+.+.. .+.+++.|+|+||.+.. ..+.++.+||.++
T Consensus 175 ~~~~~~L~~~~~~v~~~~~~g~gH~i~~--------~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 175 EKTAEFLKAAGANVEFHEYPGGGHEISP--------EELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHHCTT-GEEEEEETT-SSS--H--------HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCCCCCCCCH--------HHHHHHHHHHhhh
Confidence 777665543 35789999999999863 2567788999875
No 69
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.47 E-value=1.5e-13 Score=106.84 Aligned_cols=74 Identities=27% Similarity=0.341 Sum_probs=61.5
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcccc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 78 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~ 78 (232)
+|+||||.|++... ..+++.+++|+...++.+++.. ..+++|+||||||.+++.++.++|++++++|+++|...
T Consensus 62 ~Dl~G~G~S~g~~~-~~~~~~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 62 IDLYGCGDSAGDFA-AARWDVWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred ECCCCCCCCCCccc-cCCHHHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 69999999976543 2478899999888877776431 24799999999999999999999999999999999753
No 70
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.47 E-value=4.4e-13 Score=97.84 Aligned_cols=175 Identities=17% Similarity=0.206 Sum_probs=100.0
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
||++|-|.|++.-. .-.+...++|+...++++...+. -. -+|+|||=||-+++.+|.+.++ +.-+|.++.-....
T Consensus 68 fDF~GnGeS~gsf~-~Gn~~~eadDL~sV~q~~s~~nr--~v-~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~ 142 (269)
T KOG4667|consen 68 FDFSGNGESEGSFY-YGNYNTEADDLHSVIQYFSNSNR--VV-PVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLK 142 (269)
T ss_pred EEecCCCCcCCccc-cCcccchHHHHHHHHHHhccCce--EE-EEEEeecCccHHHHHHHHhhcC-chheEEcccccchh
Confidence 69999999987532 22566778999888888754221 01 2699999999999999999887 55566554322111
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcC--
Q 026829 81 DDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKV-- 158 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i-- 158 (232)
+........-.+.... .. .++.... +.+...|.-++ ....+.+ ..+..+.-.+|
T Consensus 143 -~~I~eRlg~~~l~~ik----e~----------Gfid~~~-----rkG~y~~rvt~--eSlmdrL--ntd~h~aclkId~ 198 (269)
T KOG4667|consen 143 -NGINERLGEDYLERIK----EQ----------GFIDVGP-----RKGKYGYRVTE--ESLMDRL--NTDIHEACLKIDK 198 (269)
T ss_pred -cchhhhhcccHHHHHH----hC----------CceecCc-----ccCCcCceecH--HHHHHHH--hchhhhhhcCcCc
Confidence 0000000000000000 00 0000000 00001111000 0000111 11222333335
Q ss_pred CccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCC
Q 026829 159 SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGE 206 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~ 206 (232)
+||||-+||.+|.+||.+.++.+++.++ +.+++++||+.|.....+
T Consensus 199 ~C~VLTvhGs~D~IVPve~AkefAk~i~--nH~L~iIEgADHnyt~~q 244 (269)
T KOG4667|consen 199 QCRVLTVHGSEDEIVPVEDAKEFAKIIP--NHKLEIIEGADHNYTGHQ 244 (269)
T ss_pred cCceEEEeccCCceeechhHHHHHHhcc--CCceEEecCCCcCccchh
Confidence 8999999999999999999999988764 689999999999987643
No 71
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.44 E-value=6.1e-13 Score=102.53 Aligned_cols=206 Identities=19% Similarity=0.261 Sum_probs=110.1
Q ss_pred CCCCCCCCCCC--ccc-ccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccc
Q 026829 1 MDYPGFGLSAG--LHG-YIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 77 (232)
Q Consensus 1 ~D~~G~G~S~~--~~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~ 77 (232)
+|-|||..-.. +.+ ..+|++++++++.+.++++.-. .++-+|--.||.|-.++|.++|++|.|+||++|.+
T Consensus 61 i~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk------~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~ 134 (283)
T PF03096_consen 61 IDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLK------SVIGFGVGAGANILARFALKHPERVLGLILVNPTC 134 (283)
T ss_dssp EE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---
T ss_pred EeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCcc------EEEEEeeccchhhhhhccccCccceeEEEEEecCC
Confidence 47899965332 233 3679999999999999987532 37789999999999999999999999999999976
Q ss_pred cCCcCCCChHHHHHHHHHHHhhcCCCccCC--CCchhhHhhcCchhh---h-hhcccc-cccCC-cccHHHHHHHHHHHH
Q 026829 78 KIADDMVPPFLVKQILIGIANILPKHKLVP--QKDLAEAAFRDLKNR---E-LTKYNV-IVYKD-KPRLRTALELLKTTE 149 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~-~~~~~~-~~~~~-~~~l~~~~~~~~~~~ 149 (232)
... . +-.|...++... .+.....-+ ...+....|...... + ...+.. ..-.. +..+..+++.+....
T Consensus 135 ~~~-g-w~Ew~~~K~~~~---~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~ 209 (283)
T PF03096_consen 135 TAA-G-WMEWFYQKLSSW---LLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRT 209 (283)
T ss_dssp S-----HHHHHHHHHH----------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT--
T ss_pred CCc-c-HHHHHHHHHhcc---cccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccc
Confidence 521 1 112322222210 000000000 000111111111000 0 000000 00001 123555666666666
Q ss_pred HHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 150 GIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 150 ~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
++........||+|++.|+.-+.. +.+..+..+.....+++..+++||=.+..|+|++. ...+.=||.
T Consensus 210 DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~kl----aea~~lFlQ 277 (283)
T PF03096_consen 210 DLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKL----AEAFKLFLQ 277 (283)
T ss_dssp ---SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHH----HHHHHHHHH
T ss_pred cchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHH----HHHHHHHHc
Confidence 777677778899999999999875 44557777776667899999999999999999874 444555554
No 72
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.42 E-value=1.2e-11 Score=97.56 Aligned_cols=134 Identities=18% Similarity=0.160 Sum_probs=82.7
Q ss_pred CCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchh
Q 026829 42 LPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKN 121 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (232)
.+++|+||||||.+|+.++.++|+.++++++++|...... ..+. .. .+.. .+.+...
T Consensus 138 ~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~---~~~~-~~---~~~~----------------~l~~~~~ 194 (275)
T TIGR02821 138 ERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVAPSR---CPWG-QK---AFSA----------------YLGADEA 194 (275)
T ss_pred CceEEEEEChhHHHHHHHHHhCcccceEEEEECCccCccc---Ccch-HH---HHHH----------------Hhccccc
Confidence 3689999999999999999999999999999998754221 1110 00 0000 1100000
Q ss_pred hhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccCh-hHHHHHHHHhc--CCCccEEEcCCC
Q 026829 122 RELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDP-SVSKALYEKAS--SKDKKCILYKDA 198 (232)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~-~~~~~~~~~~~--~~~~~~~~~~~~ 198 (232)
....+ +.. .+.... ....|+++.+|+.|+.+|. ..+..+.+.+. ....++++++|+
T Consensus 195 ------~~~~~----------~~~----~~~~~~-~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~~~~~~g~ 253 (275)
T TIGR02821 195 ------AWRSY----------DAS----LLVADG-GRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALTLRRQAGY 253 (275)
T ss_pred ------chhhc----------chH----HHHhhc-ccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeEEEEeCCC
Confidence 00000 000 111111 2467999999999999987 33334444332 245789999999
Q ss_pred ccccccCCChhHHHHHHHHHHHHHHhh
Q 026829 199 FHSLLEGEPDDMIIRVFADIISWLDDH 225 (232)
Q Consensus 199 ~H~~~~e~~~~~~~~~~~~i~~~l~~~ 225 (232)
+|.-.. ....+...++|..++
T Consensus 254 ~H~f~~------~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 254 DHSYYF------IASFIADHLRHHAER 274 (275)
T ss_pred Cccchh------HHHhHHHHHHHHHhh
Confidence 999764 234777788888776
No 73
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.42 E-value=1.3e-12 Score=113.80 Aligned_cols=165 Identities=19% Similarity=0.312 Sum_probs=103.4
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhhcC
Q 026829 22 LVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILP 101 (232)
Q Consensus 22 ~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (232)
..+|+.+.++.+.+.+......+.|.|||.||.+++.++.+.| .+++.+.+++... +.... .. .
T Consensus 453 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~--------~~~~~-----~~--~ 516 (620)
T COG1506 453 DLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVD--------WLLYF-----GE--S 516 (620)
T ss_pred cHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcch--------hhhhc-----cc--c
Confidence 4556666666554433333346899999999999999998888 6777776665432 10000 00 0
Q ss_pred CCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHH
Q 026829 102 KHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKAL 181 (232)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~ 181 (232)
.. .+...... .... .... .+.+..... .....++++|+|+|||++|..||.+.+..+
T Consensus 517 ~~----------~~~~~~~~---~~~~-----~~~~----~~~~~~~sp-~~~~~~i~~P~LliHG~~D~~v~~~q~~~~ 573 (620)
T COG1506 517 TE----------GLRFDPEE---NGGG-----PPED----REKYEDRSP-IFYADNIKTPLLLIHGEEDDRVPIEQAEQL 573 (620)
T ss_pred ch----------hhcCCHHH---hCCC-----cccC----hHHHHhcCh-hhhhcccCCCEEEEeecCCccCChHHHHHH
Confidence 00 00000000 0000 0000 001111111 134678999999999999999999999999
Q ss_pred HHHhc--CCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhhcc
Q 026829 182 YEKAS--SKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRS 228 (232)
Q Consensus 182 ~~~~~--~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~~ 228 (232)
++++. ..+++++++|+.+|.+.. |+. ..+++.++++|+.+++.+
T Consensus 574 ~~aL~~~g~~~~~~~~p~e~H~~~~--~~~-~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 574 VDALKRKGKPVELVVFPDEGHGFSR--PEN-RVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred HHHHHHcCceEEEEEeCCCCcCCCC--chh-HHHHHHHHHHHHHHHhcC
Confidence 98765 356799999999999875 444 346899999999998765
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.38 E-value=1.3e-11 Score=97.63 Aligned_cols=135 Identities=23% Similarity=0.352 Sum_probs=80.6
Q ss_pred CeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhh
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNR 122 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (232)
+++|+||||||..|+.++.++|+++++++.++|...+.. .++. .. .+... +.....
T Consensus 144 ~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~---~~~~-~~---~~~~~----------------~g~~~~- 199 (283)
T PLN02442 144 RASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPIN---CPWG-QK---AFTNY----------------LGSDKA- 199 (283)
T ss_pred ceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCccc---Cchh-hH---HHHHH----------------cCCChh-
Confidence 589999999999999999999999999999998754221 0110 00 00110 000000
Q ss_pred hhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChh-HHHHHHHHhc--CCCccEEEcCCCc
Q 026829 123 ELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPS-VSKALYEKAS--SKDKKCILYKDAF 199 (232)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~-~~~~~~~~~~--~~~~~~~~~~~~~ 199 (232)
....++ .. .....+...++|+++++|++|.+++.. .++.+.+.+. ..++++++++|.+
T Consensus 200 ~~~~~d------------------~~-~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~ 260 (283)
T PLN02442 200 DWEEYD------------------AT-ELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYD 260 (283)
T ss_pred hHHHcC------------------hh-hhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCC
Confidence 000000 00 111234567899999999999999863 2344443322 2357899999999
Q ss_pred cccccCCChhHHHHHHHHHHHHHHhhh
Q 026829 200 HSLLEGEPDDMIIRVFADIISWLDDHS 226 (232)
Q Consensus 200 H~~~~e~~~~~~~~~~~~i~~~l~~~~ 226 (232)
|..+ .+...+.+.+.|..++.
T Consensus 261 H~~~------~~~~~i~~~~~~~~~~~ 281 (283)
T PLN02442 261 HSYF------FIATFIDDHINHHAQAL 281 (283)
T ss_pred ccHH------HHHHHHHHHHHHHHHHh
Confidence 9876 23334444455555443
No 75
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.37 E-value=1.5e-11 Score=93.96 Aligned_cols=208 Identities=15% Similarity=0.148 Sum_probs=119.2
Q ss_pred CCCCCCCCC--CCccc-ccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccc
Q 026829 1 MDYPGFGLS--AGLHG-YIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 77 (232)
Q Consensus 1 ~D~~G~G~S--~~~~~-~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~ 77 (232)
+|-|||-.- .=+.+ ..+|++++++++..+++++... .++=+|--.|+.|-.++|.+||++|-|+||+++.+
T Consensus 84 V~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk------~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~ 157 (326)
T KOG2931|consen 84 VDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLK------SVIGMGVGAGAYILARFALNHPERVLGLVLINCDP 157 (326)
T ss_pred cCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcc------eEEEecccccHHHHHHHHhcChhheeEEEEEecCC
Confidence 477888432 22334 3679999999999999886421 36678888999999999999999999999999876
Q ss_pred cCCcCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhh---hh-hcccc-cccC-CcccHHHHHHHHHHHHHH
Q 026829 78 KIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNR---EL-TKYNV-IVYK-DKPRLRTALELLKTTEGI 151 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~-~~~~-~~~~l~~~~~~~~~~~~~ 151 (232)
... .+-.|...++...+-....-...+. ..+....|...... +. ..|.. .... .+..+..+++.+....++
T Consensus 158 ~a~--gwiew~~~K~~s~~l~~~Gmt~~~~-d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL 234 (326)
T KOG2931|consen 158 CAK--GWIEWAYNKVSSNLLYYYGMTQGVK-DYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDL 234 (326)
T ss_pred CCc--hHHHHHHHHHHHHHHHhhchhhhHH-HHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCc
Confidence 421 1113333333221111000000000 00111111111100 00 00100 0000 112344445554444444
Q ss_pred HHhcC----cCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 152 ERRLE----KVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 152 ~~~l~----~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
.-... .++||||++.|++-+-++ ....+..+.....+++..+.++|=.+.+++|.+. ...+.=|+.
T Consensus 235 ~~~r~~~~~tlkc~vllvvGd~Sp~~~--~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl----~ea~~~Flq 304 (326)
T KOG2931|consen 235 SIERPKLGTTLKCPVLLVVGDNSPHVS--AVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKL----AEAFKYFLQ 304 (326)
T ss_pred cccCCCcCccccccEEEEecCCCchhh--hhhhhhcccCcccceEEEEcccCCcccccCchHH----HHHHHHHHc
Confidence 32222 556999999999998763 3345555555567899999999999999999874 344544554
No 76
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.35 E-value=8.2e-12 Score=89.79 Aligned_cols=139 Identities=21% Similarity=0.282 Sum_probs=96.1
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCe-EEEecccchHHHHHHHhhCCCceeEEEEcCccccC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPS-FLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 79 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~-~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~ 79 (232)
||+||-|+|.+..++ ..-+ .+|+..+++.++.. .++.+. .|.|.|+||.|++.+|.+.|+- ...|-++|...
T Consensus 66 fNfRgVG~S~G~fD~--GiGE-~~Da~aaldW~~~~--hp~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~- 138 (210)
T COG2945 66 FNFRGVGRSQGEFDN--GIGE-LEDAAAALDWLQAR--HPDSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPIN- 138 (210)
T ss_pred ecccccccccCcccC--Ccch-HHHHHHHHHHHHhh--CCCchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCC-
Confidence 689999999987543 2223 45677777887753 345565 6899999999999999998862 33332222210
Q ss_pred CcCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCC
Q 026829 80 ADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVS 159 (232)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~ 159 (232)
.| -...+....
T Consensus 139 ---------------------------------------------------~~------------------dfs~l~P~P 149 (210)
T COG2945 139 ---------------------------------------------------AY------------------DFSFLAPCP 149 (210)
T ss_pred ---------------------------------------------------ch------------------hhhhccCCC
Confidence 00 001245567
Q ss_pred ccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 160 LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 160 ~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
+|.++|+|+.|.++++....++.+. ..-++++++++.|+.+..- ..+.+.+.+|+.
T Consensus 150 ~~~lvi~g~~Ddvv~l~~~l~~~~~---~~~~~i~i~~a~HFF~gKl-----~~l~~~i~~~l~ 205 (210)
T COG2945 150 SPGLVIQGDADDVVDLVAVLKWQES---IKITVITIPGADHFFHGKL-----IELRDTIADFLE 205 (210)
T ss_pred CCceeEecChhhhhcHHHHHHhhcC---CCCceEEecCCCceecccH-----HHHHHHHHHHhh
Confidence 9999999999999998877665543 4568999999999998632 236667778874
No 77
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.35 E-value=2.5e-11 Score=92.51 Aligned_cols=137 Identities=20% Similarity=0.262 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhh
Q 026829 20 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANI 99 (232)
Q Consensus 20 ~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~ 99 (232)
+...+++...++.++........++.++|+||||.+|+.++.+. ..+++++..-|... .
T Consensus 76 ~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~-------~------------- 134 (218)
T PF01738_consen 76 EQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP-------P------------- 134 (218)
T ss_dssp HHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS-------G-------------
T ss_pred HHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC-------C-------------
Confidence 45667777778888765433334788999999999999999876 56888875444000 0
Q ss_pred cCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHHH
Q 026829 100 LPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSK 179 (232)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~ 179 (232)
. .......++++|+|+++|++|+.++++...
T Consensus 135 -------------~------------------------------------~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~ 165 (218)
T PF01738_consen 135 -------------P------------------------------------PPLEDAPKIKAPVLILFGENDPFFPPEEVE 165 (218)
T ss_dssp -------------G------------------------------------GHHHHGGG--S-EEEEEETT-TTS-HHHHH
T ss_pred -------------C------------------------------------cchhhhcccCCCEeecCccCCCCCChHHHH
Confidence 0 000124567899999999999999988766
Q ss_pred HHHHHhc--CCCccEEEcCCCccccccCCCh----hHHHHHHHHHHHHHHhhh
Q 026829 180 ALYEKAS--SKDKKCILYKDAFHSLLEGEPD----DMIIRVFADIISWLDDHS 226 (232)
Q Consensus 180 ~~~~~~~--~~~~~~~~~~~~~H~~~~e~~~----~~~~~~~~~i~~~l~~~~ 226 (232)
.+.+.+. ....++++|+|++|--...... ...++..+.+++||++++
T Consensus 166 ~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 166 ALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp HHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 6666552 3568999999999998765433 345677888999998764
No 78
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.35 E-value=3.5e-11 Score=93.88 Aligned_cols=219 Identities=17% Similarity=0.223 Sum_probs=108.7
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccch-HHHHHHHhhCCC--ceeEEEEcCccc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGG-AVALKVHLKQPN--AWSGAILVAPMC 77 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg-~ia~~~a~~~p~--~v~~lil~ap~~ 77 (232)
++.||||.+.......++ ..+.+|+..+++.+++. .+..|++.+|.|||| ++|-.++.+.-+ .-.++++++|+-
T Consensus 110 ~~~Rgcs~~~n~~p~~yh-~G~t~D~~~~l~~l~~~--~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~D 186 (345)
T COG0429 110 FHFRGCSGEANTSPRLYH-SGETEDIRFFLDWLKAR--FPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFD 186 (345)
T ss_pred EecccccCCcccCcceec-ccchhHHHHHHHHHHHh--CCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHH
Confidence 578999988653221111 12336777777777653 456789999999999 666666544322 234566666642
Q ss_pred c------CCcCCC----ChHHHHHHHHHHHhhcCCC-ccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHH
Q 026829 78 K------IADDMV----PPFLVKQILIGIANILPKH-KLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLK 146 (232)
Q Consensus 78 ~------~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 146 (232)
. +..... ...+.......+.+.+... ...+. .... ..+.. +....++..--...-.+..+.+.++
T Consensus 187 l~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~-~~~~-~ik~~--~ti~eFD~~~Tap~~Gf~da~dYYr 262 (345)
T COG0429 187 LEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPG-TVLA-AIKRC--RTIREFDDLLTAPLHGFADAEDYYR 262 (345)
T ss_pred HHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCc-HHHH-HHHhh--chHHhccceeeecccCCCcHHHHHH
Confidence 1 111100 0001111111111111000 00000 0000 00000 0011111100000000111112222
Q ss_pred HHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCCh-hHHHHHHHHHHHHHHhh
Q 026829 147 TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPD-DMIIRVFADIISWLDDH 225 (232)
Q Consensus 147 ~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~-~~~~~~~~~i~~~l~~~ 225 (232)
.. --...+.+|.+|+|||+..+|++++++..-+.-.. .++++.+..-+.+||.-+..... ....=..+.+.+|++..
T Consensus 263 ~a-Ss~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~-~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 263 QA-SSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEM-LNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred hc-cccccccccccceEEEecCCCCCCChhhCCcchhc-CCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHH
Confidence 11 11256889999999999999999988655443322 35788999999999999887322 11011456688898876
Q ss_pred hcc
Q 026829 226 SRS 228 (232)
Q Consensus 226 ~~~ 228 (232)
.++
T Consensus 341 ~~~ 343 (345)
T COG0429 341 LEA 343 (345)
T ss_pred Hhh
Confidence 654
No 79
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.33 E-value=8.1e-12 Score=94.57 Aligned_cols=175 Identities=19% Similarity=0.223 Sum_probs=78.2
Q ss_pred HHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhhcCCCccCCCC
Q 026829 30 YSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQK 109 (232)
Q Consensus 30 ~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (232)
++.|+..+.....++-|+|.|.||-+|+.+|..+| .|+.+|.++|............... +-++. ++..
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~-------~~lp~---~~~~ 78 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSS-------KPLPY---LPFD 78 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE---------EE-------B-
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCC-------ccCCc---CCcC
Confidence 44454444444457899999999999999999999 7999999998754322110000000 00000 0000
Q ss_pred chhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhH-HHHHHHHhc--
Q 026829 110 DLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSV-SKALYEKAS-- 186 (232)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~-~~~~~~~~~-- 186 (232)
.. ....................... ..+..=.+.++++|+|+|.|++|.+.|... ++.+.+++.
T Consensus 79 -~~--~~~~~~~~~~~~~~~~~~~~~~~----------~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~ 145 (213)
T PF08840_consen 79 -IS--KFSWNEPGLLRSRYAFELADDKA----------VEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAA 145 (213)
T ss_dssp -GG--G-EE-TTS-EE-TT-B--TTTGG----------GCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCT
T ss_pred -hh--hceecCCcceehhhhhhcccccc----------cccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHh
Confidence 00 00000000000000000000000 000000256789999999999999998643 333333322
Q ss_pred -CC-CccEEEcCCCccccccC-----CC----------------h---hHHHHHHHHHHHHHHhhhcc
Q 026829 187 -SK-DKKCILYKDAFHSLLEG-----EP----------------D---DMIIRVFADIISWLDDHSRS 228 (232)
Q Consensus 187 -~~-~~~~~~~~~~~H~~~~e-----~~----------------~---~~~~~~~~~i~~~l~~~~~~ 228 (232)
.+ +.+++.|+++||.+..- .. + .-.+...+.+++||.+++.|
T Consensus 146 ~~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~~ 213 (213)
T PF08840_consen 146 GFPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLGQ 213 (213)
T ss_dssp T-----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 22 46888999999997311 10 0 12345678899999998764
No 80
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.30 E-value=7e-11 Score=90.38 Aligned_cols=71 Identities=23% Similarity=0.381 Sum_probs=54.5
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcccc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 78 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~ 78 (232)
+.+||+|.+++..+..++-.+-..-+.++++.+.. +..++.+|||.|+-.|+++|..+| ..|++|++|...
T Consensus 68 iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i-----~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 68 INYPGFGFTPGYPDQQYTNEERQNFVNALLDELGI-----KGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred eCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCC-----CCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 36899999988766655655555555556665532 236899999999999999999986 679999999764
No 81
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.29 E-value=3e-11 Score=91.69 Aligned_cols=52 Identities=15% Similarity=0.248 Sum_probs=37.5
Q ss_pred HHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcc
Q 026829 25 DVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 76 (232)
Q Consensus 25 d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~ 76 (232)
++.+.++.+.........+++|+||||||.+++.++.++|+.+.+++.++..
T Consensus 78 ~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~ 129 (212)
T TIGR01840 78 SLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGL 129 (212)
T ss_pred HHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCC
Confidence 3444444443322222347999999999999999999999999998877654
No 82
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.25 E-value=1.2e-10 Score=90.90 Aligned_cols=198 Identities=19% Similarity=0.242 Sum_probs=62.6
Q ss_pred cHHHHHHHHHHHHHhhhcCCC--CCCCCeEEEecccchHHHHHHHhhC-----CCceeEEEEcCccccCCcCCCCh---H
Q 026829 18 SFDRLVDDVIEHYSNIKEYPE--FRTLPSFLFGQSLGGAVALKVHLKQ-----PNAWSGAILVAPMCKIADDMVPP---F 87 (232)
Q Consensus 18 ~~~~~~~d~~~~~~~l~~~~~--~~~~~~~lvGhSmGg~ia~~~a~~~-----p~~v~~lil~ap~~~~~~~~~~~---~ 87 (232)
+.++=++|+.+++.+++.... ....+++|+|||.|.--++.+..+. ...|+|+||-||++....-..-. .
T Consensus 82 SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~ 161 (303)
T PF08538_consen 82 SLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGERE 161 (303)
T ss_dssp -HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH--
T ss_pred hhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchH
Confidence 455557777777777765410 1234799999999999999997654 25699999999987522111101 1
Q ss_pred HHHHHHHHHHhhcCCC---ccCCCCchhhHhh-cCchhhhhhcccccccCCcccHHHHHHHHH---HHHHHHHhcCcCCc
Q 026829 88 LVKQILIGIANILPKH---KLVPQKDLAEAAF-RDLKNRELTKYNVIVYKDKPRLRTALELLK---TTEGIERRLEKVSL 160 (232)
Q Consensus 88 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~l~~i~~ 160 (232)
...+.+.....+...- ..+|... ....+ ..+. +.+.......+. ..-+++. .-+.+.+.+..+..
T Consensus 162 ~~~~~v~~A~~~i~~g~~~~~lp~~~-~~~~~~~~Pi----TA~Rf~SL~s~~---gdDD~FSSDL~de~l~~tfG~v~~ 233 (303)
T PF08538_consen 162 AYEELVALAKELIAEGKGDEILPREF-TPLVFYDTPI----TAYRFLSLASPG---GDDDYFSSDLSDERLKKTFGKVSK 233 (303)
T ss_dssp -HHHHHHHHHHHHHCT-TT-GG-----GGTTT-SS-------HHHHHT-S-SS---HHHHTHHHHHTT-HHHHTGGG--S
T ss_pred HHHHHHHHHHHHHHcCCCCceeeccc-cccccCCCcc----cHHHHHhccCCC---CcccccCCCCCHHHHHHHhccCCC
Confidence 1222222222221100 0111100 00000 1110 000000000000 0001111 12355678899999
Q ss_pred cEEEEeeCCCCccChhHH-HHHHHHhc---CC---CccEEEcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 161 PLLILHGENDTVTDPSVS-KALYEKAS---SK---DKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 161 PvLii~G~~D~~v~~~~~-~~~~~~~~---~~---~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
|+|++.|++|..||...- +.+.++.. .+ ...-.+++|+.|.+-.+..+..++.+...+..||+
T Consensus 234 plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 234 PLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -EEEEEE--TT-----------------------------------------------------------
T ss_pred ceEEEecCCCceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 999999999999976322 22222221 11 12245899999999865444333445666666653
No 83
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.24 E-value=4.2e-10 Score=90.85 Aligned_cols=197 Identities=14% Similarity=0.189 Sum_probs=101.3
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCC---ceeEEEEcCccc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN---AWSGAILVAPMC 77 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~---~v~~lil~ap~~ 77 (232)
+..||+|.|.=......+. .+.+|+.+++++++. .++..|++.+|.||||+|.+.+..+..+ .+.++.+++|+-
T Consensus 160 fN~RG~~g~~LtTpr~f~a-g~t~Dl~~~v~~i~~--~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 160 FNHRGLGGSKLTTPRLFTA-GWTEDLREVVNHIKK--RYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWD 236 (409)
T ss_pred ECCCCCCCCccCCCceeec-CCHHHHHHHHHHHHH--hCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccch
Confidence 3579998875322211121 235577777777765 4777899999999999999999765433 466788888875
Q ss_pred cC--CcC---CCChHHHHHHH-HHHHhhcC-CCc-cCCCCchhhHhhcCchhhhhhcc-cccccCCcccHHHHHHHHHHH
Q 026829 78 KI--ADD---MVPPFLVKQIL-IGIANILP-KHK-LVPQKDLAEAAFRDLKNRELTKY-NVIVYKDKPRLRTALELLKTT 148 (232)
Q Consensus 78 ~~--~~~---~~~~~~~~~~~-~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~ 148 (232)
.+ ... ....++..+.+ ..+.++.. ... ........+...+....++.+.. ....+ .-+.... .++.
T Consensus 237 ~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~-gf~~~de---YY~~- 311 (409)
T KOG1838|consen 237 LLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMF-GFKSVDE---YYKK- 311 (409)
T ss_pred hhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhc-CCCcHHH---HHhh-
Confidence 32 100 01111111111 11111110 000 00000000001111111111100 00000 0011111 1111
Q ss_pred HHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCC
Q 026829 149 EGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGE 206 (232)
Q Consensus 149 ~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~ 206 (232)
......+.+|.+|+|+|...+|+++|++.. ...+...++++-+++-..+||.-+.|.
T Consensus 312 aSs~~~v~~I~VP~L~ina~DDPv~p~~~i-p~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 312 ASSSNYVDKIKVPLLCINAADDPVVPEEAI-PIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred cchhhhcccccccEEEEecCCCCCCCcccC-CHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 122356889999999999999999987522 222222356777888889999999876
No 84
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.23 E-value=1.4e-10 Score=92.79 Aligned_cols=167 Identities=22% Similarity=0.268 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHh
Q 026829 19 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIAN 98 (232)
Q Consensus 19 ~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~ 98 (232)
+..++.|++.+++.+.+.++..+..+.+.|.|.||.+++.+|.-.| +|++++...|... +. .. .. .
T Consensus 152 yr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~---d~--~~----~~---~- 217 (320)
T PF05448_consen 152 YRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLC---DF--RR----AL---E- 217 (320)
T ss_dssp HHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSS---SH--HH----HH---H-
T ss_pred HHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCcc---ch--hh----hh---h-
Confidence 4556778888888888766554557899999999999999999876 5999998888542 10 00 00 0
Q ss_pred hcCCCccCCCCchhhHhhc--CchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChh
Q 026829 99 ILPKHKLVPQKDLAEAAFR--DLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPS 176 (232)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~ 176 (232)
+.... .+...+ ..+++ +.. .......++.+. +-+......+|++|+++-.|-.|+++||.
T Consensus 218 ~~~~~--~~y~~~-~~~~~~~d~~--------------~~~~~~v~~~L~-Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~ 279 (320)
T PF05448_consen 218 LRADE--GPYPEI-RRYFRWRDPH--------------HEREPEVFETLS-YFDAVNFARRIKCPVLFSVGLQDPVCPPS 279 (320)
T ss_dssp HT--S--TTTHHH-HHHHHHHSCT--------------HCHHHHHHHHHH-TT-HHHHGGG--SEEEEEEETT-SSS-HH
T ss_pred cCCcc--ccHHHH-HHHHhccCCC--------------cccHHHHHHHHh-hhhHHHHHHHcCCCEEEEEecCCCCCCch
Confidence 00000 000000 11111 110 001111222221 11444567889999999999999999999
Q ss_pred HHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhh
Q 026829 177 VSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 225 (232)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~ 225 (232)
..-..+.++.. .+++++++..+|....+. -.+..++||.+|
T Consensus 280 t~fA~yN~i~~-~K~l~vyp~~~He~~~~~-------~~~~~~~~l~~~ 320 (320)
T PF05448_consen 280 TQFAAYNAIPG-PKELVVYPEYGHEYGPEF-------QEDKQLNFLKEH 320 (320)
T ss_dssp HHHHHHCC--S-SEEEEEETT--SSTTHHH-------HHHHHHHHHHH-
T ss_pred hHHHHHhccCC-CeeEEeccCcCCCchhhH-------HHHHHHHHHhcC
Confidence 88778877764 699999999999976521 245677898775
No 85
>PLN00021 chlorophyllase
Probab=99.22 E-value=2.7e-10 Score=91.05 Aligned_cols=127 Identities=15% Similarity=0.165 Sum_probs=82.1
Q ss_pred CeEEEecccchHHHHHHHhhCCC-----ceeEEEEcCccccCCcCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhc
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPN-----AWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFR 117 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~-----~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (232)
+++|+||||||.+|+.+|.++|+ ++.++|+++|......... ..
T Consensus 127 ~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~~~----------------------~~--------- 175 (313)
T PLN00021 127 KLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKGKQ----------------------TP--------- 175 (313)
T ss_pred heEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccccC----------------------CC---------
Confidence 68999999999999999998874 5788888888643210000 00
Q ss_pred CchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCC-----c----cChh-HHHHHHHHhcC
Q 026829 118 DLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDT-----V----TDPS-VSKALYEKASS 187 (232)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~-----~----v~~~-~~~~~~~~~~~ 187 (232)
+ .+ + ......-++.+|+|++.+..|. + .|+. ....++++.+
T Consensus 176 -p-----------------~i------l----~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~- 226 (313)
T PLN00021 176 -P-----------------PV------L----TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECK- 226 (313)
T ss_pred -C-----------------cc------c----ccCcccccCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcC-
Confidence 0 00 0 0001112378999999999763 2 2343 3367777654
Q ss_pred CCccEEEcCCCccccccCCC-------------------hhHHHHHHHHHHHHHHhhhccC
Q 026829 188 KDKKCILYKDAFHSLLEGEP-------------------DDMIIRVFADIISWLDDHSRSS 229 (232)
Q Consensus 188 ~~~~~~~~~~~~H~~~~e~~-------------------~~~~~~~~~~i~~~l~~~~~~~ 229 (232)
+.+.+.+++++||+-+.|.. +.....+...++.||......+
T Consensus 227 ~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~ 287 (313)
T PLN00021 227 APAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGD 287 (313)
T ss_pred CCeeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 47889999999999885443 1344455666778888766554
No 86
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.20 E-value=3.2e-10 Score=95.46 Aligned_cols=61 Identities=11% Similarity=0.148 Sum_probs=48.1
Q ss_pred cHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHH----HHhhCCC-ceeEEEEcCccccCC
Q 026829 18 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALK----VHLKQPN-AWSGAILVAPMCKIA 80 (232)
Q Consensus 18 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~----~a~~~p~-~v~~lil~ap~~~~~ 80 (232)
++++|++.+.++++.+.+.. ...++.++||||||.++.. +++++++ +|++++++++...+.
T Consensus 266 ~ldDYv~~i~~Ald~V~~~t--G~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 266 GLSTYVDALKEAVDAVRAIT--GSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred CHHHHHHHHHHHHHHHHHhc--CCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 78999988888888876531 1336899999999999997 7788886 799999887765543
No 87
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.16 E-value=2.4e-10 Score=83.33 Aligned_cols=120 Identities=20% Similarity=0.282 Sum_probs=77.4
Q ss_pred cHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHH-hhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHH
Q 026829 18 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVH-LKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGI 96 (232)
Q Consensus 18 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a-~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~ 96 (232)
+.+.|++.+.+.+.. .+.+++|||||+|+..+++++ .....+|+|++|+||...- ...
T Consensus 38 ~~~~W~~~l~~~i~~-------~~~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~-----~~~--------- 96 (171)
T PF06821_consen 38 DLDEWVQALDQAIDA-------IDEPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPD-----DPE--------- 96 (171)
T ss_dssp -HHHHHHHHHHCCHC--------TTTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCG-----CHH---------
T ss_pred CHHHHHHHHHHHHhh-------cCCCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcc-----ccc---------
Confidence 456666655544432 234789999999999999999 7788899999999996321 000
Q ss_pred HhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChh
Q 026829 97 ANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPS 176 (232)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~ 176 (232)
.. ... + . .+...+ ...+.+|..+|.+++|+.+|++
T Consensus 97 ----~~-----~~~-----~--------~-----~f~~~p------------------~~~l~~~~~viaS~nDp~vp~~ 131 (171)
T PF06821_consen 97 ----PF-----PPE-----L--------D-----GFTPLP------------------RDPLPFPSIVIASDNDPYVPFE 131 (171)
T ss_dssp ----CC-----TCG-----G--------C-----CCTTSH------------------CCHHHCCEEEEEETTBSSS-HH
T ss_pred ----ch-----hhh-----c--------c-----ccccCc------------------ccccCCCeEEEEcCCCCccCHH
Confidence 00 000 0 0 000000 1223466699999999999999
Q ss_pred HHHHHHHHhcCCCccEEEcCCCccccccCC
Q 026829 177 VSKALYEKASSKDKKCILYKDAFHSLLEGE 206 (232)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~ 206 (232)
.+..+.++. +.+++.++++||+.-.+-
T Consensus 132 ~a~~~A~~l---~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 132 RAQRLAQRL---GAELIILGGGGHFNAASG 158 (171)
T ss_dssp HHHHHHHHH---T-EEEEETS-TTSSGGGT
T ss_pred HHHHHHHHc---CCCeEECCCCCCcccccC
Confidence 999998876 679999999999986543
No 88
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.16 E-value=4.6e-10 Score=91.16 Aligned_cols=184 Identities=21% Similarity=0.280 Sum_probs=91.4
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
+|+||-|.|.... ..++.+.+...+++.+... +......+.++|.||||.+|+++|.-++.+++++|..+|.+.-.
T Consensus 224 vDmPG~G~s~~~~-l~~D~~~l~~aVLd~L~~~---p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ 299 (411)
T PF06500_consen 224 VDMPGQGESPKWP-LTQDSSRLHQAVLDYLASR---PWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHF 299 (411)
T ss_dssp E--TTSGGGTTT--S-S-CCHHHHHHHHHHHHS---TTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCG
T ss_pred EccCCCcccccCC-CCcCHHHHHHHHHHHHhcC---CccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhh
Confidence 5999999986432 2223345555665555433 33333468899999999999999988889999999998865311
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHH-Hhc--Cc
Q 026829 81 DDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIE-RRL--EK 157 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~l--~~ 157 (232)
- ...+.. .+ .| . .+.+....+..... .+...+..- +....... ..+ .+
T Consensus 300 f--t~~~~~-------~~-~P------~------my~d~LA~rlG~~~----~~~~~l~~e---l~~~SLk~qGlL~~rr 350 (411)
T PF06500_consen 300 F--TDPEWQ-------QR-VP------D------MYLDVLASRLGMAA----VSDESLRGE---LNKFSLKTQGLLSGRR 350 (411)
T ss_dssp G--H-HHHH-------TT-S-------H------HHHHHHHHHCT-SC----E-HHHHHHH---GGGGSTTTTTTTTSS-
T ss_pred h--ccHHHH-------hc-CC------H------HHHHHHHHHhCCcc----CCHHHHHHH---HHhcCcchhccccCCC
Confidence 0 000000 00 00 0 00000000000000 000001000 00000001 123 56
Q ss_pred CCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCC-CccccccCCChhHHHHHHHHHHHHHHhhhc
Q 026829 158 VSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKD-AFHSLLEGEPDDMIIRVFADIISWLDDHSR 227 (232)
Q Consensus 158 i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~ 227 (232)
..+|+|.+.|++|+++|.+.++-+++ .. .+.+...++. .=|+-+. +.+..+..||.++++
T Consensus 351 ~~~plL~i~~~~D~v~P~eD~~lia~-~s-~~gk~~~~~~~~~~~gy~--------~al~~~~~Wl~~~l~ 411 (411)
T PF06500_consen 351 CPTPLLAINGEDDPVSPIEDSRLIAE-SS-TDGKALRIPSKPLHMGYP--------QALDEIYKWLEDKLC 411 (411)
T ss_dssp BSS-EEEEEETT-SSS-HHHHHHHHH-TB-TT-EEEEE-SSSHHHHHH--------HHHHHHHHHHHHHHC
T ss_pred CCcceEEeecCCCCCCCHHHHHHHHh-cC-CCCceeecCCCccccchH--------HHHHHHHHHHHHhcC
Confidence 78999999999999999998865554 33 3556666654 4366542 478889999988753
No 89
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.14 E-value=5.8e-10 Score=98.85 Aligned_cols=206 Identities=15% Similarity=0.116 Sum_probs=109.3
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCC--------------CCCCCCeEEEecccchHHHHHHHhhCCCc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYP--------------EFRTLPSFLFGQSLGGAVALKVHLKQPNA 66 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~--------------~~~~~~~~lvGhSmGg~ia~~~a~~~p~~ 66 (232)
+|.||+|.|+|..... . .+-.+|..+.++.+..+. .-.+..+.++|.|+||.+++.+|...|..
T Consensus 285 ~D~RGtg~SeG~~~~~-~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp~ 362 (767)
T PRK05371 285 VSGIGTRGSDGCPTTG-D-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVEG 362 (767)
T ss_pred EcCCCCCCCCCcCccC-C-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCCc
Confidence 4899999999853211 1 334556666666665321 11145789999999999999999988999
Q ss_pred eeEEEEcCccccCCcCCCChHHHHHHHHHHHhhcCCCccCCCCc---hhhHhhcC----------chh-hh-hhcccccc
Q 026829 67 WSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKD---LAEAAFRD----------LKN-RE-LTKYNVIV 131 (232)
Q Consensus 67 v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----------~~~-~~-~~~~~~~~ 131 (232)
++++|-.+++.....-...... + ..+. -.+..+ +....+.. ... .. ........
T Consensus 363 LkAIVp~a~is~~yd~yr~~G~-------~--~~~~--g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (767)
T PRK05371 363 LETIIPEAAISSWYDYYRENGL-------V--RAPG--GYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAAQ 431 (767)
T ss_pred ceEEEeeCCCCcHHHHhhcCCc-------e--eccC--CcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhhh
Confidence 9999988776431100000000 0 0000 000000 00000000 000 00 00000000
Q ss_pred cCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcC--CCccEEEcCCCccccccCCChh
Q 026829 132 YKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASS--KDKKCILYKDAFHSLLEGEPDD 209 (232)
Q Consensus 132 ~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~e~~~~ 209 (232)
....+....+++ .......+.++++|+|++||..|..+++..+.++++++.. .++++.+.++ +|......+
T Consensus 432 ~~~~~~y~~fW~----~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~g-~H~~~~~~~-- 504 (767)
T PRK05371 432 DRKTGDYNDFWD----DRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQG-GHVYPNNWQ-- 504 (767)
T ss_pred hhcCCCccHHHH----hCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeCC-CccCCCchh--
Confidence 000000001111 1123345678999999999999999998888788877642 3566765554 576443222
Q ss_pred HHHHHHHHHHHHHHhhhc
Q 026829 210 MIIRVFADIISWLDDHSR 227 (232)
Q Consensus 210 ~~~~~~~~i~~~l~~~~~ 227 (232)
...+...+++||+.++.
T Consensus 505 -~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 505 -SIDFRDTMNAWFTHKLL 521 (767)
T ss_pred -HHHHHHHHHHHHHhccc
Confidence 12466778899987765
No 90
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.12 E-value=3.1e-09 Score=86.99 Aligned_cols=70 Identities=16% Similarity=0.199 Sum_probs=55.4
Q ss_pred cCcCC-ccEEEEeeCCCCccChhHHHHHHHHh---cCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhh
Q 026829 155 LEKVS-LPLLILHGENDTVTDPSVSKALYEKA---SSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 225 (232)
Q Consensus 155 l~~i~-~PvLii~G~~D~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~ 225 (232)
++.|+ +|+|.+-|++|.++++..+..+.+.. +...++.++.+++||.-..-- ....+.+.-.|.+||.++
T Consensus 333 l~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G-~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 333 PGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSG-SRFREEIYPLVREFIRRN 406 (406)
T ss_pred HHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeC-hhhhhhhchHHHHHHHhC
Confidence 56788 99999999999999999888777653 445677888889999977633 345567888899999753
No 91
>COG0400 Predicted esterase [General function prediction only]
Probab=99.11 E-value=1.3e-09 Score=81.55 Aligned_cols=105 Identities=26% Similarity=0.371 Sum_probs=77.7
Q ss_pred CCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchh
Q 026829 42 LPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKN 121 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (232)
.+++++|+|=||+|++.+.+++|+.++++|+.+|+.-... .
T Consensus 99 ~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~--------------------------~------------- 139 (207)
T COG0400 99 SRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP--------------------------E------------- 139 (207)
T ss_pred hheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC--------------------------c-------------
Confidence 4789999999999999999999999999998887542100 0
Q ss_pred hhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhc--CCCccEEEcCCCc
Q 026829 122 RELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKAS--SKDKKCILYKDAF 199 (232)
Q Consensus 122 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~ 199 (232)
..-..-..|+|++||+.|++||...+..+.+.+. ..+++...++ +|
T Consensus 140 -------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~G 187 (207)
T COG0400 140 -------------------------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GG 187 (207)
T ss_pred -------------------------------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CC
Confidence 0001235899999999999999877766655433 3467888888 88
Q ss_pred cccccCCChhHHHHHHHHHHHHHHhh
Q 026829 200 HSLLEGEPDDMIIRVFADIISWLDDH 225 (232)
Q Consensus 200 H~~~~e~~~~~~~~~~~~i~~~l~~~ 225 (232)
|.+..| .++++.+|+.+.
T Consensus 188 H~i~~e--------~~~~~~~wl~~~ 205 (207)
T COG0400 188 HEIPPE--------ELEAARSWLANT 205 (207)
T ss_pred CcCCHH--------HHHHHHHHHHhc
Confidence 998753 345566788754
No 92
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.11 E-value=2.9e-10 Score=98.08 Aligned_cols=75 Identities=19% Similarity=0.129 Sum_probs=59.3
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcccc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 78 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~ 78 (232)
+|+||||.|++..... + ...++|+.++++.+.... ..+.++.++||||||.+++.+|..+|+.++++|..++...
T Consensus 59 ~D~RG~g~S~g~~~~~-~-~~~~~D~~~~i~~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 59 QDTRGRGASEGEFDLL-G-SDEAADGYDLVDWIAKQP-WCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred EeccccccCCCceEec-C-cccchHHHHHHHHHHhCC-CCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 5999999999764332 2 456778888888776542 2345899999999999999999999999999999877654
No 93
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.06 E-value=4.3e-10 Score=92.93 Aligned_cols=77 Identities=16% Similarity=0.023 Sum_probs=56.3
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcccc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 78 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~ 78 (232)
+|+||||.|..+... .....+.+++.++++.+.....+.-.+++||||||||.||..++.+.|++|.+++++.|...
T Consensus 79 VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 79 VDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred EECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 599999988654322 23355666666666665432122223689999999999999999999999999999998643
No 94
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.06 E-value=7.5e-09 Score=76.38 Aligned_cols=54 Identities=24% Similarity=0.260 Sum_probs=38.9
Q ss_pred CCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHH
Q 026829 158 VSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWL 222 (232)
Q Consensus 158 i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l 222 (232)
-..++++++|+.|.++|.+.+...++ .+..++.+|++|.... .++.+..|++|+
T Consensus 133 ~~~~~lvll~~~DEvLd~~~a~~~~~-----~~~~~i~~ggdH~f~~------f~~~l~~i~~f~ 186 (187)
T PF05728_consen 133 NPERYLVLLQTGDEVLDYREAVAKYR-----GCAQIIEEGGDHSFQD------FEEYLPQIIAFL 186 (187)
T ss_pred CCccEEEEEecCCcccCHHHHHHHhc-----CceEEEEeCCCCCCcc------HHHHHHHHHHhh
Confidence 35789999999999999876544432 3455567888999764 134667788876
No 95
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.03 E-value=1.3e-09 Score=86.58 Aligned_cols=68 Identities=19% Similarity=0.209 Sum_probs=50.5
Q ss_pred HHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEE-EcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 151 IERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCI-LYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 151 ~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
+.+.++.++.|+|++-=+.|.+.|++..+.+.+.+....+ ++ +-...||--|..+.+. +...|..||+
T Consensus 298 l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~-~~~i~S~~GHDaFL~e~~~----~~~~i~~fL~ 366 (368)
T COG2021 298 LTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGA-LREIDSPYGHDAFLVESEA----VGPLIRKFLA 366 (368)
T ss_pred HHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCc-eEEecCCCCchhhhcchhh----hhHHHHHHhh
Confidence 3456888999999999999999999999988887754333 54 4456899999854432 4456666665
No 96
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.01 E-value=2.7e-08 Score=76.46 Aligned_cols=138 Identities=13% Similarity=0.176 Sum_probs=99.5
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHh
Q 026829 19 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIAN 98 (232)
Q Consensus 19 ~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~ 98 (232)
..+...|+...++.|..........+.++|+||||.+++.++.+.| .+++.+..-|...
T Consensus 89 ~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~-------------------- 147 (236)
T COG0412 89 PAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLI-------------------- 147 (236)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCC--------------------
Confidence 3677888888888887654323346899999999999999998877 6777764332110
Q ss_pred hcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHH
Q 026829 99 ILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVS 178 (232)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~ 178 (232)
.. . . ....++++|+|++.|+.|..+|....
T Consensus 148 --------~~-------------------~-------~----------------~~~~~~~~pvl~~~~~~D~~~p~~~~ 177 (236)
T COG0412 148 --------AD-------------------D-------T----------------ADAPKIKVPVLLHLAGEDPYIPAADV 177 (236)
T ss_pred --------CC-------------------c-------c----------------cccccccCcEEEEecccCCCCChhHH
Confidence 00 0 0 00357899999999999999998766
Q ss_pred HHHHHHhcCC--CccEEEcCCCccccccCC-------ChhHHHHHHHHHHHHHHhhhc
Q 026829 179 KALYEKASSK--DKKCILYKDAFHSLLEGE-------PDDMIIRVFADIISWLDDHSR 227 (232)
Q Consensus 179 ~~~~~~~~~~--~~~~~~~~~~~H~~~~e~-------~~~~~~~~~~~i~~~l~~~~~ 227 (232)
..+.+++... ..++++++++.|..+++. .....+...+.+++||.++..
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 178 DALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred HHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 6666655433 578999999999988652 223456788889999988764
No 97
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.97 E-value=5.7e-08 Score=76.13 Aligned_cols=77 Identities=21% Similarity=0.295 Sum_probs=56.3
Q ss_pred CCCCCCCCCCc-----ccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCC---CceeEEEEc
Q 026829 2 DYPGFGLSAGL-----HGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQP---NAWSGAILV 73 (232)
Q Consensus 2 D~~G~G~S~~~-----~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p---~~v~~lil~ 73 (232)
.+.||-.++.. .+...++++-++..+++++........++.+++|+|||+|+.|++++..+.+ .+|++++++
T Consensus 39 sh~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lL 118 (266)
T PF10230_consen 39 SHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILL 118 (266)
T ss_pred cCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEe
Confidence 35677655433 2344578888887777776664421113557999999999999999999998 789999999
Q ss_pred Ccccc
Q 026829 74 APMCK 78 (232)
Q Consensus 74 ap~~~ 78 (232)
-|...
T Consensus 119 fPTi~ 123 (266)
T PF10230_consen 119 FPTIE 123 (266)
T ss_pred CCccc
Confidence 98764
No 98
>PRK10115 protease 2; Provisional
Probab=98.93 E-value=1.9e-08 Score=88.72 Aligned_cols=167 Identities=15% Similarity=0.161 Sum_probs=96.7
Q ss_pred HHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhhcCC
Q 026829 23 VDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPK 102 (232)
Q Consensus 23 ~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (232)
.+|++++.+.+.+..-.....+.+.|-|.||.++..++.++|++++++|...|+..+..-+. . +.
T Consensus 505 ~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~------------~---~~ 569 (686)
T PRK10115 505 FNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTML------------D---ES 569 (686)
T ss_pred HHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcc------------c---CC
Confidence 34455555555443222234689999999999999999899999999999888754211000 0 00
Q ss_pred CccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCcc-EEEEeeCCCCccChhHHHHH
Q 026829 103 HKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLP-LLILHGENDTVTDPSVSKAL 181 (232)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~P-vLii~G~~D~~v~~~~~~~~ 181 (232)
.+........+.++.. ....+.+....-+ ..+.+++.| +|+++|.+|.-||+..+.++
T Consensus 570 ---~p~~~~~~~e~G~p~~-----------------~~~~~~l~~~SP~-~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~ 628 (686)
T PRK10115 570 ---IPLTTGEFEEWGNPQD-----------------PQYYEYMKSYSPY-DNVTAQAYPHLLVTTGLHDSQVQYWEPAKW 628 (686)
T ss_pred ---CCCChhHHHHhCCCCC-----------------HHHHHHHHHcCch-hccCccCCCceeEEecCCCCCcCchHHHHH
Confidence 0000000001111110 0111122111111 345677899 66779999999999999898
Q ss_pred HHHhcC--CCccEEEc---CCCccccccCCChhHHHHHHHHHHHHHHhhhc
Q 026829 182 YEKASS--KDKKCILY---KDAFHSLLEGEPDDMIIRVFADIISWLDDHSR 227 (232)
Q Consensus 182 ~~~~~~--~~~~~~~~---~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~ 227 (232)
.+++.. .+.+++++ +++||.--. +........+....|+-....
T Consensus 629 ~a~Lr~~~~~~~~vl~~~~~~~GHg~~~--~r~~~~~~~A~~~aFl~~~~~ 677 (686)
T PRK10115 629 VAKLRELKTDDHLLLLCTDMDSGHGGKS--GRFKSYEGVAMEYAFLIALAQ 677 (686)
T ss_pred HHHHHhcCCCCceEEEEecCCCCCCCCc--CHHHHHHHHHHHHHHHHHHhC
Confidence 887653 34677888 999999432 222222345556677765543
No 99
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.92 E-value=3e-08 Score=70.77 Aligned_cols=119 Identities=18% Similarity=0.209 Sum_probs=84.5
Q ss_pred ccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHH
Q 026829 17 PSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGI 96 (232)
Q Consensus 17 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~ 96 (232)
+..++|++.+...+... ..|++||+||+|+..++.++.+.-..|+|++|++|.-.-.....
T Consensus 41 P~~~dWi~~l~~~v~a~-------~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~------------ 101 (181)
T COG3545 41 PVLDDWIARLEKEVNAA-------EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIR------------ 101 (181)
T ss_pred CCHHHHHHHHHHHHhcc-------CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccc------------
Confidence 46788888877766543 34799999999999999999877668999999998532100000
Q ss_pred HhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChh
Q 026829 97 ANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPS 176 (232)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~ 176 (232)
+. .. . .+... -...+.-|.+++..++|+.++++
T Consensus 102 ----------~~-----~~---------~-----tf~~~------------------p~~~lpfps~vvaSrnDp~~~~~ 134 (181)
T COG3545 102 ----------PK-----HL---------M-----TFDPI------------------PREPLPFPSVVVASRNDPYVSYE 134 (181)
T ss_pred ----------hh-----hc---------c-----ccCCC------------------ccccCCCceeEEEecCCCCCCHH
Confidence 00 00 0 00000 01345689999999999999999
Q ss_pred HHHHHHHHhcCCCccEEEcCCCcccccc
Q 026829 177 VSKALYEKASSKDKKCILYKDAFHSLLE 204 (232)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 204 (232)
.++.+.+.. ...++....+||.--.
T Consensus 135 ~a~~~a~~w---gs~lv~~g~~GHiN~~ 159 (181)
T COG3545 135 HAEDLANAW---GSALVDVGEGGHINAE 159 (181)
T ss_pred HHHHHHHhc---cHhheecccccccchh
Confidence 999888765 5688999999998643
No 100
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.91 E-value=6e-08 Score=81.69 Aligned_cols=78 Identities=19% Similarity=0.274 Sum_probs=54.5
Q ss_pred CCCC-CCCCCCCccc-ccccHHHHHHHHHHHHHhhh-cCCCCCCCCeEEEecccchHHHHHHHhhC----------CCce
Q 026829 1 MDYP-GFGLSAGLHG-YIPSFDRLVDDVIEHYSNIK-EYPEFRTLPSFLFGQSLGGAVALKVHLKQ----------PNAW 67 (232)
Q Consensus 1 ~D~~-G~G~S~~~~~-~~~~~~~~~~d~~~~~~~l~-~~~~~~~~~~~lvGhSmGg~ia~~~a~~~----------p~~v 67 (232)
+|+| |+|.|..... ...+.++.++|+.+++.... ..+++.+.|++|+||||||.++-.+|.+- +=.+
T Consensus 127 iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inL 206 (462)
T PTZ00472 127 VDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINL 206 (462)
T ss_pred EeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeee
Confidence 4765 9998865432 23356788999888887553 23334456899999999999988876541 1147
Q ss_pred eEEEEcCcccc
Q 026829 68 SGAILVAPMCK 78 (232)
Q Consensus 68 ~~lil~ap~~~ 78 (232)
+|+++.+|...
T Consensus 207 kGi~IGNg~~d 217 (462)
T PTZ00472 207 AGLAVGNGLTD 217 (462)
T ss_pred EEEEEeccccC
Confidence 89999887653
No 101
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.89 E-value=1.8e-08 Score=74.81 Aligned_cols=200 Identities=15% Similarity=0.201 Sum_probs=103.5
Q ss_pred CCCCCCCCCCCcc--cccccHHHHHH-HHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccc
Q 026829 1 MDYPGFGLSAGLH--GYIPSFDRLVD-DVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 77 (232)
Q Consensus 1 ~D~~G~G~S~~~~--~~~~~~~~~~~-d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~ 77 (232)
+|+||-|.|.... +.-..+.||+. |+-.++..+++. .++.|.+.|||||||-+.-.+ .++| ++.+...-....
T Consensus 63 ~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~--~~~~P~y~vgHS~GGqa~gL~-~~~~-k~~a~~vfG~ga 138 (281)
T COG4757 63 FDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKA--LPGHPLYFVGHSFGGQALGLL-GQHP-KYAAFAVFGSGA 138 (281)
T ss_pred EecccccCCCccccccCccchhhhhhcchHHHHHHHHhh--CCCCceEEeeccccceeeccc-ccCc-ccceeeEecccc
Confidence 5999999997432 22236677765 666666666553 357799999999999876444 4566 444444333222
Q ss_pred cCCcCCCChHHHHHHHHHHH--hh-cCCCccCCCCchhhHhhcCch------hhhhhccc--ccccCCcccHHHHHHHHH
Q 026829 78 KIADDMVPPFLVKQILIGIA--NI-LPKHKLVPQKDLAEAAFRDLK------NRELTKYN--VIVYKDKPRLRTALELLK 146 (232)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~~l~~~~~~~~ 146 (232)
... ..+.. .+....+. .+ .+..... ...+...++.-.. .++-..+. +..|-+++.+
T Consensus 139 gws-g~m~~---~~~l~~~~l~~lv~p~lt~w-~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~-------- 205 (281)
T COG4757 139 GWS-GWMGL---RERLGAVLLWNLVGPPLTFW-KGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAM-------- 205 (281)
T ss_pred ccc-cchhh---hhcccceeeccccccchhhc-cccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhH--------
Confidence 211 11100 00000000 00 0000000 0011111111000 00000000 0011122221
Q ss_pred HHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCC----CccccccCCChhHHHHHHHHHHHHH
Q 026829 147 TTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKD----AFHSLLEGEPDDMIIRVFADIISWL 222 (232)
Q Consensus 147 ~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~----~~H~~~~e~~~~~~~~~~~~i~~~l 222 (232)
...++.++.+.+|+..+-..+|+.+|+.....+.+-..+..-+...++. .||+-...++. |...+++++|+
T Consensus 206 --~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~---Ealwk~~L~w~ 280 (281)
T COG4757 206 --RNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPF---EALWKEMLGWF 280 (281)
T ss_pred --hHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccch---HHHHHHHHHhh
Confidence 2344566778999999999999999998887777655433444555544 59998876663 24677888886
No 102
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.84 E-value=2.1e-07 Score=71.24 Aligned_cols=67 Identities=25% Similarity=0.307 Sum_probs=48.5
Q ss_pred CCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhh---CCCceeEEEEcCcc
Q 026829 2 DYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK---QPNAWSGAILVAPM 76 (232)
Q Consensus 2 D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~---~p~~v~~lil~ap~ 76 (232)
++||++..+ ....+++++++..++.+.... ++.|++|+|||+||.||.++|.+ .-..+..++++.+.
T Consensus 34 ~~~~~~~~~---~~~~si~~la~~y~~~I~~~~-----~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 34 EYPGRGDDE---PPPDSIEELASRYAEAIRARQ-----PEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp CSTTSCTTS---HEESSHHHHHHHHHHHHHHHT-----SSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred ecCCCCCCC---CCCCCHHHHHHHHHHHhhhhC-----CCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 466776222 123488999998888776542 34489999999999999999864 34558899998854
No 103
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.83 E-value=4.2e-09 Score=82.92 Aligned_cols=77 Identities=12% Similarity=0.028 Sum_probs=53.2
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcccc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 78 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~ 78 (232)
+|++|++.+... ....+...+.+++..+++.+.........+++||||||||.||..++.+.|+++++++++.|...
T Consensus 72 vD~~~~~~~~y~-~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 72 VDWGRGANPNYP-QAVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred EECccccccChH-HHHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 478887433221 11224555666676777666442112223689999999999999999999999999999998653
No 104
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.78 E-value=1.8e-08 Score=83.77 Aligned_cols=72 Identities=13% Similarity=0.124 Sum_probs=50.8
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCc----eeEEEEcCcc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNA----WSGAILVAPM 76 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~----v~~lil~ap~ 76 (232)
.|++|+|.+-+... ..+++.+++.+.+..+... ..+.|++|+||||||.+++.++..+|+. |+++|.+++.
T Consensus 126 ~dL~g~gYDwR~~~---~~~~~~~~Lk~lIe~~~~~--~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P 200 (440)
T PLN02733 126 KTLFGFGYDFRQSN---RLPETMDGLKKKLETVYKA--SGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAP 200 (440)
T ss_pred CCcccCCCCccccc---cHHHHHHHHHHHHHHHHHH--cCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCC
Confidence 38999998865421 2445555655555544332 2345899999999999999999888874 6888888765
Q ss_pred c
Q 026829 77 C 77 (232)
Q Consensus 77 ~ 77 (232)
.
T Consensus 201 ~ 201 (440)
T PLN02733 201 F 201 (440)
T ss_pred C
Confidence 3
No 105
>PRK10162 acetyl esterase; Provisional
Probab=98.75 E-value=7.6e-07 Score=71.77 Aligned_cols=66 Identities=21% Similarity=0.277 Sum_probs=46.6
Q ss_pred ccEEEEeeCCCCccChhHHHHHHHHhc--CCCccEEEcCCCccccccCC-ChhHHHHHHHHHHHHHHhhhc
Q 026829 160 LPLLILHGENDTVTDPSVSKALYEKAS--SKDKKCILYKDAFHSLLEGE-PDDMIIRVFADIISWLDDHSR 227 (232)
Q Consensus 160 ~PvLii~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~e~-~~~~~~~~~~~i~~~l~~~~~ 227 (232)
-|++|++|+.|.+.+ .+..+.+++. ...+++++++|+.|-...-. .-......+..+.+||.++..
T Consensus 249 Pp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 249 PPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred CCeEEEecCCCcCcC--hHHHHHHHHHHcCCCEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 599999999999975 3444554433 24689999999999765321 112345688899999987653
No 106
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.63 E-value=1.2e-06 Score=70.88 Aligned_cols=58 Identities=12% Similarity=0.195 Sum_probs=44.2
Q ss_pred cHHHHH-HHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCc-eeEEEEcCccc
Q 026829 18 SFDRLV-DDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNA-WSGAILVAPMC 77 (232)
Q Consensus 18 ~~~~~~-~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~-v~~lil~ap~~ 77 (232)
++++++ +.+.+.++.++.... ..++.++|+++||.++..+++.++.+ |+++++.....
T Consensus 158 ~~edYi~e~l~~aid~v~~itg--~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~ 217 (445)
T COG3243 158 NLEDYILEGLSEAIDTVKDITG--QKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPV 217 (445)
T ss_pred cHHHHHHHHHHHHHHHHHHHhC--ccccceeeEecchHHHHHHHHhhhhcccccceeeecch
Confidence 778888 777777777654311 13689999999999999998888877 99988875443
No 107
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.58 E-value=2.1e-07 Score=82.01 Aligned_cols=78 Identities=19% Similarity=0.161 Sum_probs=53.4
Q ss_pred CCCCCCCCCCCc----------c---cc---------cccHHHHHHHHHHHHHhhh------cC----CCCCCCCeEEEe
Q 026829 1 MDYPGFGLSAGL----------H---GY---------IPSFDRLVDDVIEHYSNIK------EY----PEFRTLPSFLFG 48 (232)
Q Consensus 1 ~D~~G~G~S~~~----------~---~~---------~~~~~~~~~d~~~~~~~l~------~~----~~~~~~~~~lvG 48 (232)
+|+||||+|... . ++ ..++++.+.|++.+...++ .. ..+++.|++++|
T Consensus 482 iDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lG 561 (792)
T TIGR03502 482 IDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLG 561 (792)
T ss_pred eCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEe
Confidence 699999998321 1 12 1378999999988777665 11 124566899999
Q ss_pred cccchHHHHHHHhhCCC-----------ceeEEEEcCcccc
Q 026829 49 QSLGGAVALKVHLKQPN-----------AWSGAILVAPMCK 78 (232)
Q Consensus 49 hSmGg~ia~~~a~~~p~-----------~v~~lil~ap~~~ 78 (232)
|||||.+++.++..... .++...+.+|...
T Consensus 562 HSLGgiig~~~~~~an~~~~~~~~~~l~~~~~a~l~~pgGg 602 (792)
T TIGR03502 562 HSLGGIVGTSFIAYANTPLGSPTADALYAVNAASLQNPGGG 602 (792)
T ss_pred cCHHHHHHHHHHHhcCccccCCccccccccceeeeecCCcc
Confidence 99999999999864222 3456666665443
No 108
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.58 E-value=1.9e-06 Score=60.71 Aligned_cols=95 Identities=27% Similarity=0.346 Sum_probs=67.0
Q ss_pred CCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCch
Q 026829 41 TLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLK 120 (232)
Q Consensus 41 ~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (232)
+.|.++-||||||-++..++..--..|+++++++=.+. |+ .+
T Consensus 88 ~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfh------pp---------------------GK----------- 129 (213)
T COG3571 88 EGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFH------PP---------------------GK----------- 129 (213)
T ss_pred CCceeeccccccchHHHHHHHhhcCCcceEEEecCccC------CC---------------------CC-----------
Confidence 45899999999999999998765555889987652211 00 00
Q ss_pred hhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCcc
Q 026829 121 NRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFH 200 (232)
Q Consensus 121 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H 200 (232)
+.+++ .+++..++.|+||.||+.|..-..+..... .-+...+++.++++.|
T Consensus 130 --------------Pe~~R------------t~HL~gl~tPtli~qGtrD~fGtr~~Va~y---~ls~~iev~wl~~adH 180 (213)
T COG3571 130 --------------PEQLR------------TEHLTGLKTPTLITQGTRDEFGTRDEVAGY---ALSDPIEVVWLEDADH 180 (213)
T ss_pred --------------cccch------------hhhccCCCCCeEEeecccccccCHHHHHhh---hcCCceEEEEeccCcc
Confidence 00011 145788999999999999999876544222 1235789999999999
Q ss_pred cc
Q 026829 201 SL 202 (232)
Q Consensus 201 ~~ 202 (232)
-+
T Consensus 181 DL 182 (213)
T COG3571 181 DL 182 (213)
T ss_pred cc
Confidence 87
No 109
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.56 E-value=3.7e-07 Score=71.97 Aligned_cols=75 Identities=17% Similarity=0.180 Sum_probs=53.1
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcccc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 78 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~ 78 (232)
.|.||.|.|++..... ...-.+|..+.++.+...+ -.+..|-++|.|.+|..++.+|...|..+++++...+...
T Consensus 63 ~D~RG~g~S~G~~~~~--~~~e~~D~~d~I~W~~~Qp-ws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 63 QDVRGTGGSEGEFDPM--SPNEAQDGYDTIEWIAAQP-WSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp EE-TTSTTS-S-B-TT--SHHHHHHHHHHHHHHHHCT-TEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred ECCcccccCCCccccC--ChhHHHHHHHHHHHHHhCC-CCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 4889999999865331 4455677777777776542 2344788999999999999999988889999998776554
No 110
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.54 E-value=1.6e-06 Score=67.13 Aligned_cols=156 Identities=15% Similarity=0.123 Sum_probs=81.9
Q ss_pred cHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCC-----ceeEEEEcCccccCCcCCCChHHHHHH
Q 026829 18 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN-----AWSGAILVAPMCKIADDMVPPFLVKQI 92 (232)
Q Consensus 18 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~-----~v~~lil~ap~~~~~~~~~~~~~~~~~ 92 (232)
++...+..+..++..|+.. +.=..+.+|||||||++++.++..+.. +++++|.++..+.-......
T Consensus 81 ~~~~qa~wl~~vl~~L~~~--Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~------- 151 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKKK--YHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMND------- 151 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHC--C--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-------
T ss_pred CHHHHHHHHHHHHHHHHHh--cCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccc-------
Confidence 4455555556666666543 211246799999999999999876432 48999988754321110000
Q ss_pred HHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHH-HHhcCcCCccEEEEeeC---
Q 026829 93 LIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGI-ERRLEKVSLPLLILHGE--- 168 (232)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~l~~i~~PvLii~G~--- 168 (232)
..... .... .. +.... .++..+... +..++ -++.||-|.|.
T Consensus 152 ---------------~~~~~-~~~~---------~g------p~~~~---~~y~~l~~~~~~~~p-~~i~VLnI~G~~~~ 196 (255)
T PF06028_consen 152 ---------------DQNQN-DLNK---------NG------PKSMT---PMYQDLLKNRRKNFP-KNIQVLNIYGDLED 196 (255)
T ss_dssp ----------------TTTT--CST---------T-------BSS-----HHHHHHHHTHGGGST-TT-EEEEEEEESBT
T ss_pred ---------------cchhh-hhcc---------cC------CcccC---HHHHHHHHHHHhhCC-CCeEEEEEecccCC
Confidence 00000 0000 00 00000 111111111 12222 26889999999
Q ss_pred ---CCCccChhHHHHHHHHhcC--CCccEEEcCC--CccccccCCChhHHHHHHHHHHHHH
Q 026829 169 ---NDTVTDPSVSKALYEKASS--KDKKCILYKD--AFHSLLEGEPDDMIIRVFADIISWL 222 (232)
Q Consensus 169 ---~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~--~~H~~~~e~~~~~~~~~~~~i~~~l 222 (232)
.|.+||...+..+.-.+.. ...+-+++.| +.|.-..|+++ |.+.|.+||
T Consensus 197 g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~-----V~~~I~~FL 252 (255)
T PF06028_consen 197 GSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQ-----VDKLIIQFL 252 (255)
T ss_dssp TCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCHH-----HHHHHHHHH
T ss_pred CCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCHH-----HHHHHHHHh
Confidence 8999988766544333322 2334556655 68998877653 677788887
No 111
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.53 E-value=1.1e-06 Score=78.11 Aligned_cols=154 Identities=19% Similarity=0.218 Sum_probs=93.4
Q ss_pred HHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEE-EEcCccccCCcCCCChHHHHHHHHHHHhhcCCC
Q 026829 25 DVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGA-ILVAPMCKIADDMVPPFLVKQILIGIANILPKH 103 (232)
Q Consensus 25 d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~l-il~ap~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (232)
|.+.++..+....-.....+.|+|||.||.+++.+....|+.+.++ +.++|+..+. ..... .
T Consensus 591 D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~---~yds~----------~---- 653 (755)
T KOG2100|consen 591 DQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL---YYDST----------Y---- 653 (755)
T ss_pred HHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee---eeccc----------c----
Confidence 4444444443333222236889999999999999999988665555 8889976432 00000 0
Q ss_pred ccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccE-EEEeeCCCCccChhHHHHHH
Q 026829 104 KLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPL-LILHGENDTVTDPSVSKALY 182 (232)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~Pv-Lii~G~~D~~v~~~~~~~~~ 182 (232)
.+.....+. .+ ... +.. ..+...+..++.|. |+|||+.|..|+.+.+..+.
T Consensus 654 --------terymg~p~------~~---------~~~----y~e-~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~ 705 (755)
T KOG2100|consen 654 --------TERYMGLPS------EN---------DKG----YEE-SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILI 705 (755)
T ss_pred --------cHhhcCCCc------cc---------cch----hhh-ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHH
Confidence 000000000 00 000 000 01223445566665 99999999999999888888
Q ss_pred HHhcC--CCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhh
Q 026829 183 EKASS--KDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 226 (232)
Q Consensus 183 ~~~~~--~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~ 226 (232)
+++.. -..++.++|+..|.+..-... ..+...+..|+....
T Consensus 706 ~aL~~~gv~~~~~vypde~H~is~~~~~---~~~~~~~~~~~~~~~ 748 (755)
T KOG2100|consen 706 KALQNAGVPFRLLVYPDENHGISYVEVI---SHLYEKLDRFLRDCF 748 (755)
T ss_pred HHHHHCCCceEEEEeCCCCcccccccch---HHHHHHHHHHHHHHc
Confidence 76543 337899999999999863322 347888999998443
No 112
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.43 E-value=5.6e-05 Score=60.07 Aligned_cols=64 Identities=28% Similarity=0.411 Sum_probs=47.6
Q ss_pred CccEEEEeeCCCCccChhHHHHHHHHhc--C-CCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhhccC
Q 026829 159 SLPLLILHGENDTVTDPSVSKALYEKAS--S-KDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRSS 229 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~~~~~~~~~~--~-~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~~~ 229 (232)
+.|++|.||..|.++|+.....+.++.- . .+.+++.+++.+|....-. -....++||.++.+-.
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~-------~~~~a~~Wl~~rf~G~ 285 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFA-------SAPDALAWLDDRFAGK 285 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhc-------CcHHHHHHHHHHHCCC
Confidence 7999999999999999988877776532 3 3578888999999864311 2245568998887643
No 113
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.43 E-value=4.8e-07 Score=68.61 Aligned_cols=47 Identities=34% Similarity=0.446 Sum_probs=31.1
Q ss_pred CcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCcccccc
Q 026829 156 EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE 204 (232)
Q Consensus 156 ~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 204 (232)
..|++|+|.++|++|.+++++.++.+.+..... .+++..+|+ |.+..
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~-~~v~~h~gG-H~vP~ 204 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPERSEALAEMFDPD-ARVIEHDGG-HHVPR 204 (212)
T ss_dssp TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH-EEEEEESSS-SS---
T ss_pred ccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC-cEEEEECCC-CcCcC
Confidence 467999999999999999988888888876432 677777765 66654
No 114
>PRK04940 hypothetical protein; Provisional
Probab=98.43 E-value=8e-06 Score=59.44 Aligned_cols=115 Identities=13% Similarity=0.159 Sum_probs=71.9
Q ss_pred CeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhh
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNR 122 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (232)
++.|||+||||..|..+|.++.- +.||+||.... ...+.. .... ..
T Consensus 61 ~~~liGSSLGGyyA~~La~~~g~---~aVLiNPAv~P------~~~L~~-------~ig~-----~~------------- 106 (180)
T PRK04940 61 RPLICGVGLGGYWAERIGFLCGI---RQVIFNPNLFP------EENMEG-------KIDR-----PE------------- 106 (180)
T ss_pred CcEEEEeChHHHHHHHHHHHHCC---CEEEECCCCCh------HHHHHH-------HhCC-----Cc-------------
Confidence 68999999999999999988762 58888997642 111111 0000 00
Q ss_pred hhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCcc--EEEEeeCCCCccChhHHHHHHHHhcCCCc-cEEEcCCCc
Q 026829 123 ELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLP--LLILHGENDTVTDPSVSKALYEKASSKDK-KCILYKDAF 199 (232)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~P--vLii~G~~D~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~ 199 (232)
+ |. .+. -+. .++++ ++.| .+++..+.|.+.+.+.+...++ ++ .+.+.+|+.
T Consensus 107 -----~---y~---~~~--~~h---~~eL~-----~~~p~r~~vllq~gDEvLDyr~a~~~y~-----~~y~~~v~~GGd 160 (180)
T PRK04940 107 -----E---YA---DIA--TKC---VTNFR-----EKNRDRCLVILSRNDEVLDSQRTAEELH-----PYYEIVWDEEQT 160 (180)
T ss_pred -----c---hh---hhh--HHH---HHHhh-----hcCcccEEEEEeCCCcccCHHHHHHHhc-----cCceEEEECCCC
Confidence 0 00 000 000 11221 3344 5999999999999987765553 34 678889988
Q ss_pred cccccCCChhHHHHHHHHHHHHHH
Q 026829 200 HSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 200 H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
|..-. .++.+..|++|++
T Consensus 161 H~f~~------fe~~l~~I~~F~~ 178 (180)
T PRK04940 161 HKFKN------ISPHLQRIKAFKT 178 (180)
T ss_pred CCCCC------HHHHHHHHHHHHh
Confidence 88653 2357788889884
No 115
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.42 E-value=2.6e-06 Score=71.62 Aligned_cols=121 Identities=18% Similarity=0.241 Sum_probs=79.7
Q ss_pred cHHHHHHHHHHHHH--hhhcCCCCCCCCeEEEecccchHHHHHHHhhCCC-ceeEEEEcCccccCCcCCCChHHHHHHHH
Q 026829 18 SFDRLVDDVIEHYS--NIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN-AWSGAILVAPMCKIADDMVPPFLVKQILI 94 (232)
Q Consensus 18 ~~~~~~~d~~~~~~--~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~-~v~~lil~ap~~~~~~~~~~~~~~~~~~~ 94 (232)
+...-++..+.+.+ .++...+++..+++|+|.|||+.++..++...-+ .|+++|.++=...-.
T Consensus 224 nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~v-------------- 289 (784)
T KOG3253|consen 224 NIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTV-------------- 289 (784)
T ss_pred chHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCC--------------
Confidence 34444555555544 2333445677799999999998888777654332 377777644111000
Q ss_pred HHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccC
Q 026829 95 GIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTD 174 (232)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~ 174 (232)
... . . ...+.+-.++.|+|++.|.+|..++
T Consensus 290 ------------dgp----------r----------g------------------irDE~Lldmk~PVLFV~Gsnd~mcs 319 (784)
T KOG3253|consen 290 ------------DGP----------R----------G------------------IRDEALLDMKQPVLFVIGSNDHMCS 319 (784)
T ss_pred ------------Ccc----------c----------C------------------CcchhhHhcCCceEEEecCCcccCC
Confidence 000 0 0 0002234578999999999999999
Q ss_pred hhHHHHHHHHhcCCCccEEEcCCCccccc
Q 026829 175 PSVSKALYEKASSKDKKCILYKDAFHSLL 203 (232)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 203 (232)
++..+.+.++... +.+++++++++|.+-
T Consensus 320 pn~ME~vreKMqA-~~elhVI~~adhsma 347 (784)
T KOG3253|consen 320 PNSMEEVREKMQA-EVELHVIGGADHSMA 347 (784)
T ss_pred HHHHHHHHHHhhc-cceEEEecCCCcccc
Confidence 9999988887654 789999999999974
No 116
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.41 E-value=1e-05 Score=60.63 Aligned_cols=68 Identities=28% Similarity=0.350 Sum_probs=47.0
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhh---CCCceeEEEEcCcc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK---QPNAWSGAILVAPM 76 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~---~p~~v~~lil~ap~ 76 (232)
+|+||+|.++... .+++.+++...+.+... ....|++++||||||.++..++.+ .++.+.+++++.+.
T Consensus 31 ~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~-----~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 31 LPLPGFGPGEPLP---ASADALVEAQAEAVLRA-----AGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred ecCCCCCCCCCCC---CCHHHHHHHHHHHHHHh-----cCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccC
Confidence 4788888765432 25666666555444322 124578999999999999988875 45678899888654
No 117
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.41 E-value=1.4e-06 Score=64.67 Aligned_cols=71 Identities=23% Similarity=0.365 Sum_probs=54.3
Q ss_pred CcCCccEEEEeeCCCCccChhHHHHHHHHhcCCC---ccEEEcCCCcccccc-----CCCh--hHHHHHHHHHHHHHHhh
Q 026829 156 EKVSLPLLILHGENDTVTDPSVSKALYEKASSKD---KKCILYKDAFHSLLE-----GEPD--DMIIRVFADIISWLDDH 225 (232)
Q Consensus 156 ~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~H~~~~-----e~~~--~~~~~~~~~i~~~l~~~ 225 (232)
.++++|+|++-|+.|.++|+.....+.+.+.... .++++++|.+|--.. +.|| ...+...+.+++||+..
T Consensus 161 ~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 161 ANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred hcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 4677999999999999999988777666654322 369999999998763 3343 34566788899999876
Q ss_pred h
Q 026829 226 S 226 (232)
Q Consensus 226 ~ 226 (232)
.
T Consensus 241 ~ 241 (242)
T KOG3043|consen 241 L 241 (242)
T ss_pred h
Confidence 5
No 118
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.39 E-value=1.4e-05 Score=75.99 Aligned_cols=68 Identities=18% Similarity=0.187 Sum_probs=52.9
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhh---CCCceeEEEEcCcc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK---QPNAWSGAILVAPM 76 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~---~p~~v~~lil~ap~ 76 (232)
+|+||||.+.. ...+++++++++.+.++.+. +..|++++||||||.+|.++|.+ .++++..++++++.
T Consensus 1100 ~~~~g~~~~~~---~~~~l~~la~~~~~~i~~~~-----~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1100 IQSPRPDGPMQ---TATSLDEVCEAHLATLLEQQ-----PHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred EECCCCCCCCC---CCCCHHHHHHHHHHHHHhhC-----CCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCC
Confidence 46889986532 22488999999888776532 23489999999999999999885 58889999998764
No 119
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.33 E-value=1.5e-06 Score=65.68 Aligned_cols=62 Identities=26% Similarity=0.426 Sum_probs=46.4
Q ss_pred cHHHHHHHHHHHHHhhhcCC---CCCCCCeEEEecccchHHHHHHHhhCCC----ceeEEEEcCccccC
Q 026829 18 SFDRLVDDVIEHYSNIKEYP---EFRTLPSFLFGQSLGGAVALKVHLKQPN----AWSGAILVAPMCKI 79 (232)
Q Consensus 18 ~~~~~~~d~~~~~~~l~~~~---~~~~~~~~lvGhSmGg~ia~~~a~~~p~----~v~~lil~ap~~~~ 79 (232)
.+.+.++|+.++++.+.+.. .....+++|+|+|-||.+|+.++.+..+ .++++++++|+...
T Consensus 44 ~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 44 PFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp STTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred cccccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 56788888888888876541 1222368999999999999999874332 48999999997543
No 120
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.31 E-value=7.2e-06 Score=60.40 Aligned_cols=58 Identities=19% Similarity=0.252 Sum_probs=43.1
Q ss_pred CccEEEEeeCCCCccChhHHHHHHHHhc--CCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHh
Q 026829 159 SLPLLILHGENDTVTDPSVSKALYEKAS--SKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 224 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~ 224 (232)
..|++..||+.|++||....+...+.+. ...++.+.|+|.+|.... + -+.++..|+++
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~---~-----e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSP---Q-----ELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccH---H-----HHHHHHHHHHH
Confidence 7899999999999999876555444332 123899999999999864 2 34566778765
No 121
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.27 E-value=8.8e-06 Score=62.27 Aligned_cols=147 Identities=20% Similarity=0.240 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhhc
Q 026829 21 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANIL 100 (232)
Q Consensus 21 ~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (232)
....|+..+++.+.+........+.+-|.|-||.||+.+++-.| ++++++..-|...-. +.++ .+
T Consensus 155 ~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df----~r~i---------~~- 219 (321)
T COG3458 155 GVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDF----PRAI---------EL- 219 (321)
T ss_pred eehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccc----hhhe---------ee-
Confidence 44556655555554433333446889999999999999988776 688888777754211 0000 00
Q ss_pred CCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHH--HHHHHHhcCcCCccEEEEeeCCCCccChhHH
Q 026829 101 PKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKT--TEGIERRLEKVSLPLLILHGENDTVTDPSVS 178 (232)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~ 178 (232)
+... +...+ ..+++.. .+.. .+.+.+ +-++.....++++|+|+..|--|+++||...
T Consensus 220 ~~~~--~ydei-~~y~k~h--------------~~~e----~~v~~TL~yfD~~n~A~RiK~pvL~svgL~D~vcpPstq 278 (321)
T COG3458 220 ATEG--PYDEI-QTYFKRH--------------DPKE----AEVFETLSYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQ 278 (321)
T ss_pred cccC--cHHHH-HHHHHhc--------------CchH----HHHHHHHhhhhhhhHHHhhccceEEeecccCCCCCChhh
Confidence 0000 00000 0011000 0000 011111 1234455678999999999999999999876
Q ss_pred HHHHHHhcCCCccEEEcCCCcccccc
Q 026829 179 KALYEKASSKDKKCILYKDAFHSLLE 204 (232)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~H~~~~ 204 (232)
-..+.+.. ..+++.+++--.|+-..
T Consensus 279 FA~yN~l~-~~K~i~iy~~~aHe~~p 303 (321)
T COG3458 279 FAAYNALT-TSKTIEIYPYFAHEGGP 303 (321)
T ss_pred HHHhhccc-CCceEEEeeccccccCc
Confidence 55565554 47888888887788654
No 122
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.26 E-value=2.2e-05 Score=59.50 Aligned_cols=36 Identities=19% Similarity=0.313 Sum_probs=31.9
Q ss_pred CCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcc
Q 026829 41 TLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 76 (232)
Q Consensus 41 ~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~ 76 (232)
...+|+.|+|.||+.+..+++.+|+.|.++.+.+..
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~ 131 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGV 131 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeeccc
Confidence 447999999999999999999999999998876654
No 123
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.23 E-value=3.8e-06 Score=64.18 Aligned_cols=38 Identities=21% Similarity=0.205 Sum_probs=29.6
Q ss_pred CCCCeEEEecccchHHHHHHHhhCC---CceeEEEEcCccc
Q 026829 40 RTLPSFLFGQSLGGAVALKVHLKQP---NAWSGAILVAPMC 77 (232)
Q Consensus 40 ~~~~~~lvGhSmGg~ia~~~a~~~p---~~v~~lil~ap~~ 77 (232)
+..+++||||||||.+|..+....+ +.|+++|.++++.
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 3457999999999999988875433 4799999887643
No 124
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.20 E-value=1.2e-06 Score=55.36 Aligned_cols=30 Identities=43% Similarity=0.603 Sum_probs=27.3
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHH
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHY 30 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~ 30 (232)
+|+||||+|++.++++.+|+++++|+..++
T Consensus 49 ~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 49 YDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred ECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 599999999998999999999999998765
No 125
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.10 E-value=7.4e-06 Score=64.71 Aligned_cols=68 Identities=28% Similarity=0.364 Sum_probs=47.2
Q ss_pred CCCCCCCCCCCccccccc---HHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcc
Q 026829 1 MDYPGFGLSAGLHGYIPS---FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 76 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~---~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~ 76 (232)
+.+|||+.|.+..-...+ .+..++-++..+ .++...++|+|||.||.-+..+|..+|+ |+++||-+++
T Consensus 274 wNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~L-------gf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 274 WNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVL-------GFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred cCCCCccccCCCCCcccchHHHHHHHHHHHHHc-------CCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 579999999875321111 222222222222 3445579999999999999999999997 8999998875
No 126
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.07 E-value=0.00014 Score=54.22 Aligned_cols=63 Identities=21% Similarity=0.225 Sum_probs=47.1
Q ss_pred cCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhh
Q 026829 155 LEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 226 (232)
Q Consensus 155 l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~ 226 (232)
...+++|.|.|.|+.|.++|...+..+++... +.+++.-+ +||++.+-. . ..+.|.+||.+..
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~--~a~vl~Hp-ggH~VP~~~--~----~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQLAESFK--DATVLEHP-GGHIVPNKA--K----YKEKIADFIQSFL 221 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHHHHHhcC--CCeEEecC-CCccCCCch--H----HHHHHHHHHHHHH
Confidence 35789999999999999999999999998764 55555555 569998743 2 4556667776544
No 127
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.02 E-value=3.6e-05 Score=59.63 Aligned_cols=58 Identities=26% Similarity=0.316 Sum_probs=46.1
Q ss_pred cccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhh---CCCceeEEEEcCcccc
Q 026829 16 IPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK---QPNAWSGAILVAPMCK 78 (232)
Q Consensus 16 ~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~---~p~~v~~lil~ap~~~ 78 (232)
..+++++++..++.+..+. +..|++|+|||+||.+|..+|.+ .-+.|.-++++-+...
T Consensus 44 ~~~l~~~a~~yv~~Ir~~Q-----P~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 44 FASLDDMAAAYVAAIRRVQ-----PEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cCCHHHHHHHHHHHHHHhC-----CCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 3488999998888877653 45699999999999999999864 3456888999876554
No 128
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.98 E-value=0.00013 Score=62.22 Aligned_cols=155 Identities=20% Similarity=0.195 Sum_probs=89.6
Q ss_pred HHHHHHHhhhcCCCCCCC-CeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhhcCCC
Q 026829 25 DVIEHYSNIKEYPEFRTL-PSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKH 103 (232)
Q Consensus 25 d~~~~~~~l~~~~~~~~~-~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (232)
|-++.++.|.+...+.+. .+.|-|||.||.+++....++|+-++..|--||+.... ....... .+
T Consensus 709 DQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~--~YDTgYT-------ER----- 774 (867)
T KOG2281|consen 709 DQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWR--LYDTGYT-------ER----- 774 (867)
T ss_pred hhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeee--eecccch-------hh-----
Confidence 333444554443333333 47899999999999999999999999888777754210 0000000 00
Q ss_pred ccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHH
Q 026829 104 KLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYE 183 (232)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~ 183 (232)
+..-+. .+...|.. . +.......+..-..-.|++||--|.-|...+...+..
T Consensus 775 -----------YMg~P~------~nE~gY~a-g----------SV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs 826 (867)
T KOG2281|consen 775 -----------YMGYPD------NNEHGYGA-G----------SVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVS 826 (867)
T ss_pred -----------hcCCCc------cchhcccc-h----------hHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHH
Confidence 000000 00001110 0 0112224455545668999999999998887766665
Q ss_pred Hhc--CCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHh
Q 026829 184 KAS--SKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 224 (232)
Q Consensus 184 ~~~--~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~ 224 (232)
++- .+.-++++||+-.|.+=+-+... -.-..++.|+.+
T Consensus 827 ~lvkagKpyeL~IfP~ERHsiR~~es~~---~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 827 ALVKAGKPYELQIFPNERHSIRNPESGI---YYEARLLHFLQE 866 (867)
T ss_pred HHHhCCCceEEEEccccccccCCCccch---hHHHHHHHHHhh
Confidence 532 35579999999999996532222 234556677654
No 129
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=97.97 E-value=0.00023 Score=58.73 Aligned_cols=60 Identities=18% Similarity=0.168 Sum_probs=45.8
Q ss_pred cHHHHHH-HHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCC---ceeEEEEcCccccC
Q 026829 18 SFDRLVD-DVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN---AWSGAILVAPMCKI 79 (232)
Q Consensus 18 ~~~~~~~-d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~---~v~~lil~ap~~~~ 79 (232)
+|+++.. |+-+.++++.+.. ...+++.+|||-|+.+...+...+|+ +|+..+++||....
T Consensus 138 S~~Em~~yDLPA~IdyIL~~T--~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 138 SWHEMGTYDLPAMIDYILEKT--GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred chhhhhhcCHHHHHHHHHHhc--cccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhh
Confidence 5677665 6766677665432 12368999999999999988888876 69999999998753
No 130
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.96 E-value=6.6e-05 Score=62.75 Aligned_cols=78 Identities=24% Similarity=0.451 Sum_probs=51.0
Q ss_pred CCCC-CCCCCCCccc--ccccHHHHHHHHHHHHHhh-hcCCCCCCCCeEEEecccchHHHHHHHh----hC------CCc
Q 026829 1 MDYP-GFGLSAGLHG--YIPSFDRLVDDVIEHYSNI-KEYPEFRTLPSFLFGQSLGGAVALKVHL----KQ------PNA 66 (232)
Q Consensus 1 ~D~~-G~G~S~~~~~--~~~~~~~~~~d~~~~~~~l-~~~~~~~~~~~~lvGhSmGg~ia~~~a~----~~------p~~ 66 (232)
+|+| |-|.|..... ...+-++.++++.+++... ...+++.+.|++|.|-|.||.-+-.+|. .. +=.
T Consensus 91 iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~in 170 (415)
T PF00450_consen 91 IDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKIN 170 (415)
T ss_dssp E--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSE
T ss_pred EeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccc
Confidence 4766 8999865433 2346788888888777654 3345555669999999999987666553 22 335
Q ss_pred eeEEEEcCcccc
Q 026829 67 WSGAILVAPMCK 78 (232)
Q Consensus 67 v~~lil~ap~~~ 78 (232)
++|+++.+|...
T Consensus 171 LkGi~IGng~~d 182 (415)
T PF00450_consen 171 LKGIAIGNGWID 182 (415)
T ss_dssp EEEEEEESE-SB
T ss_pred cccceecCcccc
Confidence 889999988754
No 131
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.96 E-value=3.5e-05 Score=51.31 Aligned_cols=59 Identities=20% Similarity=0.260 Sum_probs=47.3
Q ss_pred CccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 159 SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
..|+|++.++.|+++|.+.++.+.+.+. +..++++++.||..+. ..... +.+.+.+||.
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~--~s~lvt~~g~gHg~~~-~~s~C---~~~~v~~yl~ 92 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP--GSRLVTVDGAGHGVYA-GGSPC---VDKAVDDYLL 92 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC--CceEEEEeccCcceec-CCChH---HHHHHHHHHH
Confidence 5999999999999999999999988764 6899999999999985 33333 4455556664
No 132
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.94 E-value=2.7e-05 Score=57.44 Aligned_cols=119 Identities=24% Similarity=0.334 Sum_probs=69.9
Q ss_pred CeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhhcCCCccCCCCchhhHhhcCchhh
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANILPKHKLVPQKDLAEAAFRDLKNR 122 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (232)
++-|+||||||.=|+..+++.|.+.+++--.+|...... . ||-.. .+.. ++.+ .+
T Consensus 142 k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~--c-pWGqK----Af~g----------------YLG~-~k- 196 (283)
T KOG3101|consen 142 KVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPIN--C-PWGQK----AFTG----------------YLGD-NK- 196 (283)
T ss_pred hcceeccccCCCceEEEEEcCcccccceeccccccCccc--C-cchHH----Hhhc----------------ccCC-Ch-
Confidence 568999999999999999999999999988888765321 1 22100 0111 1111 00
Q ss_pred hhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhH-HHHHHHHhcC---CCccEEEcCCC
Q 026829 123 ELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSV-SKALYEKASS---KDKKCILYKDA 198 (232)
Q Consensus 123 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~-~~~~~~~~~~---~~~~~~~~~~~ 198 (232)
..++.+... .+.........-+||=+|+.|+..+-+. -+.+.++... ....+..-+|-
T Consensus 197 -----------------a~W~~yDat-~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~~gy 258 (283)
T KOG3101|consen 197 -----------------AQWEAYDAT-HLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQEGY 258 (283)
T ss_pred -----------------HHHhhcchH-HHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhccccccEEEEeecCC
Confidence 011111111 3335566677779999999999875211 1223333221 23455567888
Q ss_pred cccccc
Q 026829 199 FHSLLE 204 (232)
Q Consensus 199 ~H~~~~ 204 (232)
.|....
T Consensus 259 DHSYyf 264 (283)
T KOG3101|consen 259 DHSYYF 264 (283)
T ss_pred Ccceee
Confidence 888765
No 133
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.94 E-value=0.0012 Score=50.08 Aligned_cols=171 Identities=18% Similarity=0.170 Sum_probs=78.3
Q ss_pred CCCCC-CCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCC
Q 026829 2 DYPGF-GLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIA 80 (232)
Q Consensus 2 D~~G~-G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~ 80 (232)
|..-| |+|+|....+ ++....+++..+++.++... ...+-|+.-|+-|.||+..|.+ ++ +.=+|.......
T Consensus 64 Dsl~HvGlSsG~I~ef-tms~g~~sL~~V~dwl~~~g---~~~~GLIAaSLSaRIAy~Va~~-i~-lsfLitaVGVVn-- 135 (294)
T PF02273_consen 64 DSLNHVGLSSGDINEF-TMSIGKASLLTVIDWLATRG---IRRIGLIAASLSARIAYEVAAD-IN-LSFLITAVGVVN-- 135 (294)
T ss_dssp ---B--------------HHHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTT-S---SEEEEES--S---
T ss_pred cccccccCCCCChhhc-chHHhHHHHHHHHHHHHhcC---CCcchhhhhhhhHHHHHHHhhc-cC-cceEEEEeeeee--
Confidence 33334 7777654433 78888889888888887532 1246799999999999999874 33 444444332211
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCc-cCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHH----HHHHHHhc
Q 026829 81 DDMVPPFLVKQILIGIANILPKHK-LVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKT----TEGIERRL 155 (232)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~l 155 (232)
++..+ .+...... ..+...+.+ +. ... .+. -..-....++++. ..-....+
T Consensus 136 --------lr~TL---e~al~~Dyl~~~i~~lp~----dl---dfe-----Gh~-l~~~vFv~dc~e~~w~~l~ST~~~~ 191 (294)
T PF02273_consen 136 --------LRDTL---EKALGYDYLQLPIEQLPE----DL---DFE-----GHN-LGAEVFVTDCFEHGWDDLDSTINDM 191 (294)
T ss_dssp --------HHHHH---HHHHSS-GGGS-GGG--S----EE---EET-----TEE-EEHHHHHHHHHHTT-SSHHHHHHHH
T ss_pred --------HHHHH---HHHhccchhhcchhhCCC----cc---ccc-----ccc-cchHHHHHHHHHcCCccchhHHHHH
Confidence 11111 11111000 000000000 00 000 000 0000111111111 11223456
Q ss_pred CcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCcccccc
Q 026829 156 EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE 204 (232)
Q Consensus 156 ~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 204 (232)
..+++|++..++.+|.+|.......+...+.+..++++.++|+.|-+-+
T Consensus 192 k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~e 240 (294)
T PF02273_consen 192 KRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLGE 240 (294)
T ss_dssp TT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TTS
T ss_pred hhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhhh
Confidence 7889999999999999999888888888777778999999999999864
No 134
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.93 E-value=0.00037 Score=55.85 Aligned_cols=51 Identities=16% Similarity=0.018 Sum_probs=37.3
Q ss_pred HHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcc
Q 026829 23 VDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 76 (232)
Q Consensus 23 ~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~ 76 (232)
+.+....+..+... . -.|+.|.|-||||.+|..+|...|..+.-+-.+++.
T Consensus 159 i~E~~~Ll~Wl~~~-G--~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~ 209 (348)
T PF09752_consen 159 ILESRALLHWLERE-G--YGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWS 209 (348)
T ss_pred HHHHHHHHHHHHhc-C--CCceEEEEechhHhhHHhhhhcCCCceeEEEeeccc
Confidence 34445556666553 2 248899999999999999999999887766666554
No 135
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.93 E-value=2.7e-05 Score=61.74 Aligned_cols=59 Identities=31% Similarity=0.448 Sum_probs=43.7
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCC-CCeEEEecccchHHHHHHHhhC
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRT-LPSFLFGQSLGGAVALKVHLKQ 63 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~-~~~~lvGhSmGg~ia~~~a~~~ 63 (232)
|.+||-|.|.|.. +-++++.|-.+.+++++....-++ ..+++.|||+||+|+..+..++
T Consensus 177 fNYpGVg~S~G~~----s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 177 FNYPGVGSSTGPP----SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred ECCCccccCCCCC----CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 4689999998753 458899998888888874321111 2589999999999998765443
No 136
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.92 E-value=2.1e-05 Score=56.47 Aligned_cols=56 Identities=20% Similarity=0.221 Sum_probs=35.8
Q ss_pred cHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCC----ceeEEEEcCc
Q 026829 18 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN----AWSGAILVAP 75 (232)
Q Consensus 18 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~----~v~~lil~ap 75 (232)
.+..+...+...+..... .+++.+++++||||||.+|..++...+. ....++..+|
T Consensus 6 ~~~~~~~~i~~~~~~~~~--~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~ 65 (153)
T cd00741 6 AARSLANLVLPLLKSALA--QYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGP 65 (153)
T ss_pred HHHHHHHHHHHHHHHHHH--HCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCC
Confidence 344455555555544332 1345679999999999999999876544 3445555554
No 137
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.91 E-value=0.00053 Score=55.16 Aligned_cols=174 Identities=18% Similarity=0.220 Sum_probs=90.6
Q ss_pred cHHHHHHHHHHHHHhhhcCCC---CCCCCeEEEecccchHHHHHHHhhCCC----ceeEEEEcCccccCCcCCCChHHHH
Q 026829 18 SFDRLVDDVIEHYSNIKEYPE---FRTLPSFLFGQSLGGAVALKVHLKQPN----AWSGAILVAPMCKIADDMVPPFLVK 90 (232)
Q Consensus 18 ~~~~~~~d~~~~~~~l~~~~~---~~~~~~~lvGhSmGg~ia~~~a~~~p~----~v~~lil~ap~~~~~~~~~~~~~~~ 90 (232)
.|..-++|+.+.+..+.+... .....+++.|+|.||.+|+.++..-.+ ...+.++++|+..... ..+..
T Consensus 125 ~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~--- 200 (312)
T COG0657 125 PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASL--- 200 (312)
T ss_pred CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccch---
Confidence 556667777777776654321 123468999999999999999875443 4678999999865432 11100
Q ss_pred HHHHHHHhhcCCCccCCCCchhhHhhcCchhhhhhcccccc-cCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCC
Q 026829 91 QILIGIANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIV-YKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGEN 169 (232)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~ 169 (232)
..... ...+....... .+....... ..+... +.. + + ....+.. --|+++++|+.
T Consensus 201 ------~~~~~-~~~~~~~~~~~-~~~~~~~~~--~~~~~~p~~s-p-l------------~~~~~~~-lPP~~i~~a~~ 255 (312)
T COG0657 201 ------PGYGE-ADLLDAAAILA-WFADLYLGA--APDREDPEAS-P-L------------ASDDLSG-LPPTLIQTAEF 255 (312)
T ss_pred ------hhcCC-ccccCHHHHHH-HHHHHhCcC--ccccCCCccC-c-c------------ccccccC-CCCEEEEecCC
Confidence 00000 00000000000 000000000 000000 000 0 0 0011334 56799999999
Q ss_pred CCccChhHHHHHHHHhc--CCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 170 DTVTDPSVSKALYEKAS--SKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 170 D~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
|.+.+ .+..+.+++. ...++++.++++.|....-...+ ....+..+.+|+.
T Consensus 256 D~l~~--~~~~~a~~L~~agv~~~~~~~~g~~H~f~~~~~~~-a~~~~~~~~~~l~ 308 (312)
T COG0657 256 DPLRD--EGEAYAERLRAAGVPVELRVYPGMIHGFDLLTGPE-ARSALRQIAAFLR 308 (312)
T ss_pred Ccchh--HHHHHHHHHHHcCCeEEEEEeCCcceeccccCcHH-HHHHHHHHHHHHH
Confidence 99997 3334444432 34578999999999653323222 3345777888876
No 138
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.91 E-value=0.00018 Score=52.73 Aligned_cols=58 Identities=16% Similarity=0.230 Sum_probs=40.6
Q ss_pred cHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCC----CceeEEEEcCccc
Q 026829 18 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQP----NAWSGAILVAPMC 77 (232)
Q Consensus 18 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p----~~v~~lil~ap~~ 77 (232)
+=++.+.|+.+.++..... -....++|+|.|+|+-|.-....+-| ++|+.++|++|..
T Consensus 46 tP~~~a~Dl~~~i~~y~~~--w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRAR--WGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred CHHHHHHHHHHHHHHHHHH--hCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 3356677776666655432 11336899999999988877766666 4688999999854
No 139
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.89 E-value=2.1e-05 Score=61.09 Aligned_cols=55 Identities=20% Similarity=0.260 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcccc
Q 026829 21 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 78 (232)
Q Consensus 21 ~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~ 78 (232)
.+.++++..++.--.. ...+..|.|+||||..|+.+++++|+.+.+++..||...
T Consensus 97 ~l~~el~p~i~~~~~~---~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 97 FLTEELIPYIEANYRT---DPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp HHHTHHHHHHHHHSSE---EECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred ehhccchhHHHHhccc---ccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 3445666665542111 112379999999999999999999999999999998654
No 140
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.80 E-value=0.00031 Score=57.91 Aligned_cols=34 Identities=32% Similarity=0.467 Sum_probs=24.1
Q ss_pred CeEEEecccchHHHHHHHhhCCCceeEEEEcCccc
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 77 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~ 77 (232)
.+.++|||+||+.++.++.+. .++++.|++.|+.
T Consensus 229 ~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W~ 262 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQD-TRFKAGILLDPWM 262 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH--TT--EEEEES---
T ss_pred heeeeecCchHHHHHHHHhhc-cCcceEEEeCCcc
Confidence 468999999999999887665 6789888877753
No 141
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.77 E-value=3.5e-05 Score=59.13 Aligned_cols=59 Identities=19% Similarity=0.296 Sum_probs=39.0
Q ss_pred ccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhC-----CCceeEEEEcCccc
Q 026829 17 PSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQ-----PNAWSGAILVAPMC 77 (232)
Q Consensus 17 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~-----p~~v~~lil~ap~~ 77 (232)
..+..+.+++...+..+.. .+++.++++.||||||++|..++... +..+..+...+|..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~--~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 105 SAYKSLYNQVLPELKSALK--QYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHHHHHHh--hCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 3455555555555544433 24566899999999999999987642 34566666666644
No 142
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.76 E-value=6e-05 Score=62.43 Aligned_cols=54 Identities=15% Similarity=0.086 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCC------ceeEEEEcCccc
Q 026829 21 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN------AWSGAILVAPMC 77 (232)
Q Consensus 21 ~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~------~v~~lil~ap~~ 77 (232)
++...+...+..+... .+.+++||||||||.++..+....+. .|+++|.+++..
T Consensus 101 ~~~~~lk~~ie~~~~~---~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKK---NGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred HHHHHHHHHHHHHHHh---cCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 3444444444444322 25689999999999999998776643 489999998654
No 143
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.76 E-value=0.00033 Score=53.19 Aligned_cols=56 Identities=16% Similarity=0.061 Sum_probs=39.6
Q ss_pred hcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhH
Q 026829 154 RLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDM 210 (232)
Q Consensus 154 ~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~ 210 (232)
...+-.+-+-+..|++|.++|.+....+-+..+..+.++-+ ++..|.-...+.+..
T Consensus 237 ~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~m 292 (301)
T KOG3975|consen 237 YCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYM 292 (301)
T ss_pred HHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeecccHHH
Confidence 34555677889999999999988777766665544455555 778888766555543
No 144
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.73 E-value=0.0032 Score=50.89 Aligned_cols=67 Identities=22% Similarity=0.383 Sum_probs=46.5
Q ss_pred cCCcc-EEEEeeCCCCccChhHHHHHHHHhc--CCCccEEEcCCCccccccCCCh-hHHHHHHHHHHHHHHhh
Q 026829 157 KVSLP-LLILHGENDTVTDPSVSKALYEKAS--SKDKKCILYKDAFHSLLEGEPD-DMIIRVFADIISWLDDH 225 (232)
Q Consensus 157 ~i~~P-vLii~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~H~~~~e~~~-~~~~~~~~~i~~~l~~~ 225 (232)
...+| +|++.++.|.+.+-. ..+.+++. ...+++..++++.|..+.=.|. ....++++.|..|+++.
T Consensus 265 ~~~lp~tlv~~ag~D~L~D~~--~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 265 GLGLPPTLVVVAGYDVLRDEG--LAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred ccCCCceEEEEeCchhhhhhh--HHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 34455 999999999998543 22333332 3456777899999998765553 45567889999998753
No 145
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.65 E-value=0.0027 Score=51.86 Aligned_cols=64 Identities=20% Similarity=0.341 Sum_probs=53.9
Q ss_pred CcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhhc
Q 026829 156 EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSR 227 (232)
Q Consensus 156 ~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~ 227 (232)
.++++|-++|-|+.|....++.+..++..++. .+.+.++||++|..-. ..+...+..|+.....
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G-~K~lr~vPN~~H~~~~-------~~~~~~l~~f~~~~~~ 322 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDSSNFYYDKLPG-EKYLRYVPNAGHSLIG-------SDVVQSLRAFYNRIQN 322 (367)
T ss_pred HhcCccEEEEecCCCceeccCchHHHHhhCCC-CeeEEeCCCCCcccch-------HHHHHHHHHHHHHHHc
Confidence 56799999999999999999999999998875 7899999999999876 2367778888876543
No 146
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.62 E-value=0.0021 Score=53.99 Aligned_cols=59 Identities=15% Similarity=0.273 Sum_probs=43.7
Q ss_pred cHHHHHHHHHHHHHhhhcCCCCCCC-CeEEEecccchHHHHHHHhhCCCceeEEEEcC-cccc
Q 026829 18 SFDRLVDDVIEHYSNIKEYPEFRTL-PSFLFGQSLGGAVALKVHLKQPNAWSGAILVA-PMCK 78 (232)
Q Consensus 18 ~~~~~~~d~~~~~~~l~~~~~~~~~-~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~a-p~~~ 78 (232)
|+.+.......++..+.+. .++. +.+|+|+.=||..++.+|+.+|+.+..+|+.+ |+..
T Consensus 117 Tl~DV~~ae~~Fv~~V~~~--hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 117 TLEDVMRAEAAFVEEVAER--HPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSY 177 (581)
T ss_pred cHHHHHHHHHHHHHHHHHh--CCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccc
Confidence 6666666556666665443 2333 67999999999999999999999998888864 5543
No 147
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.59 E-value=0.0002 Score=59.65 Aligned_cols=34 Identities=26% Similarity=0.374 Sum_probs=31.6
Q ss_pred CeEEEecccchHHHHHHHhhCCCceeEEEEcCcc
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 76 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~ 76 (232)
..+|.|+||||..|+.+++++|+.|.+++..||.
T Consensus 289 ~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 289 RTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred ceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 4789999999999999999999999999988875
No 148
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.58 E-value=0.00018 Score=55.29 Aligned_cols=53 Identities=15% Similarity=0.180 Sum_probs=35.4
Q ss_pred HHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhh----CC-----CceeEEEEcCccc
Q 026829 23 VDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK----QP-----NAWSGAILVAPMC 77 (232)
Q Consensus 23 ~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~----~p-----~~v~~lil~ap~~ 77 (232)
...+.+++..+... .....++|++||||+.+.+.+... .+ .++..+||.+|-.
T Consensus 76 ~~~l~~~L~~L~~~--~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 76 GPALARFLRDLARA--PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred HHHHHHHHHHHHhc--cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 33455555555432 123479999999999999987432 22 3678899988854
No 149
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.56 E-value=0.00025 Score=55.96 Aligned_cols=71 Identities=30% Similarity=0.465 Sum_probs=55.0
Q ss_pred cCcCC-ccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhh
Q 026829 155 LEKVS-LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 226 (232)
Q Consensus 155 l~~i~-~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~ 226 (232)
+..+. +|+|++||.+|.++|...+..+++......++..++++++|......+. ..++.+..+.+|+.++.
T Consensus 227 ~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~-~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 227 AEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPP-AVEQALDKLAEFLERHL 298 (299)
T ss_pred HhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccH-HHHHHHHHHHHHHHHhc
Confidence 34444 8999999999999999999888887654357888899999998864333 23457888999998764
No 150
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.48 E-value=0.0042 Score=47.46 Aligned_cols=56 Identities=14% Similarity=0.089 Sum_probs=36.2
Q ss_pred cHHHHHHHHHHHHHhhhcCCCCCCCC-eEEEecccchHHHHHHHhhCCC-----ceeEEEEcCcc
Q 026829 18 SFDRLVDDVIEHYSNIKEYPEFRTLP-SFLFGQSLGGAVALKVHLKQPN-----AWSGAILVAPM 76 (232)
Q Consensus 18 ~~~~~~~d~~~~~~~l~~~~~~~~~~-~~lvGhSmGg~ia~~~a~~~p~-----~v~~lil~ap~ 76 (232)
+..++..-+..++.+|.++ + +.| +..|||||||.-..+++..+.. .++++|.++..
T Consensus 114 s~~~~s~wlk~~msyL~~~--Y-~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gp 175 (288)
T COG4814 114 SGLDQSKWLKKAMSYLQKH--Y-NIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGP 175 (288)
T ss_pred chhhHHHHHHHHHHHHHHh--c-CCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccc
Confidence 3444455555566666653 2 344 5699999999999998876432 26677766543
No 151
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.47 E-value=0.00023 Score=50.08 Aligned_cols=53 Identities=23% Similarity=0.320 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhC-------CCceeEEEEcCcc
Q 026829 22 LVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQ-------PNAWSGAILVAPM 76 (232)
Q Consensus 22 ~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~-------p~~v~~lil~ap~ 76 (232)
+.+.+.+.+..+.+. +++..+++.||||||++|..++... +..++.+..-+|.
T Consensus 46 ~~~~~~~~l~~~~~~--~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~ 105 (140)
T PF01764_consen 46 LYDQILDALKELVEK--YPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPR 105 (140)
T ss_dssp HHHHHHHHHHHHHHH--STTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S-
T ss_pred HHHHHHHHHHHHHhc--ccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCcc
Confidence 333444444443332 2345689999999999999987642 1345555555553
No 152
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.47 E-value=0.00016 Score=63.04 Aligned_cols=27 Identities=33% Similarity=0.470 Sum_probs=20.3
Q ss_pred CeEEEecccchHHHHHHHhhCCCceeEE
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPNAWSGA 70 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~~v~~l 70 (232)
.++|+||||||.||..++ ..|+.++|.
T Consensus 183 sVILVGHSMGGiVAra~~-tlkn~~~~s 209 (973)
T KOG3724|consen 183 SVILVGHSMGGIVARATL-TLKNEVQGS 209 (973)
T ss_pred eEEEEeccchhHHHHHHH-hhhhhccch
Confidence 389999999999997664 456555543
No 153
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.46 E-value=0.0003 Score=54.18 Aligned_cols=35 Identities=29% Similarity=0.469 Sum_probs=32.7
Q ss_pred CeEEEecccchHHHHHHHhhCCCceeEEEEcCccc
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 77 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~ 77 (232)
+..|+||||||.+++...+.+|+.|...+++||..
T Consensus 138 ~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 138 RTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred cceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 57899999999999999999999999999999965
No 154
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.39 E-value=0.0031 Score=47.43 Aligned_cols=37 Identities=16% Similarity=0.159 Sum_probs=28.6
Q ss_pred EEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCcccccc
Q 026829 163 LILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE 204 (232)
Q Consensus 163 Lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 204 (232)
..+-|++|.++|++..+..++. .+.+..++ ++|+++.
T Consensus 169 ~aiIg~~D~IFpp~nQ~~~W~~----~~~~~~~~-~~Hy~F~ 205 (213)
T PF04301_consen 169 KAIIGKKDRIFPPENQKRAWQG----RCTIVEID-APHYPFF 205 (213)
T ss_pred EEEEcCCCEEeCHHHHHHHHhC----cCcEEEec-CCCcCch
Confidence 4788999999999988877753 24566664 7899975
No 155
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.32 E-value=0.00089 Score=51.05 Aligned_cols=34 Identities=18% Similarity=0.114 Sum_probs=26.9
Q ss_pred CCeEEEecccchHHHHHHHhhCC----CceeEEEEcCc
Q 026829 42 LPSFLFGQSLGGAVALKVHLKQP----NAWSGAILVAP 75 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~~~p----~~v~~lil~ap 75 (232)
.++++.|||.||.+|..++...+ ++|.++.....
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 36999999999999999988743 46777776544
No 156
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.29 E-value=0.00035 Score=51.56 Aligned_cols=137 Identities=15% Similarity=0.206 Sum_probs=80.1
Q ss_pred cHHHHHHHHHHHHHhhhcCCCCCCC-CeEEEecccchHHHHHHHhh-CCCceeEEEEcCccccCCcCCCChHHHHHHHHH
Q 026829 18 SFDRLVDDVIEHYSNIKEYPEFRTL-PSFLFGQSLGGAVALKVHLK-QPNAWSGAILVAPMCKIADDMVPPFLVKQILIG 95 (232)
Q Consensus 18 ~~~~~~~d~~~~~~~l~~~~~~~~~-~~~lvGhSmGg~ia~~~a~~-~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~ 95 (232)
+.++.+.++...++.+... +++. .+.+-|||.|+-+|.++..+ +.-+|.|++|++....+. .
T Consensus 113 tL~qt~~~~~~gv~filk~--~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~----------E---- 176 (270)
T KOG4627|consen 113 TLEQTMTQFTHGVNFILKY--TENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLR----------E---- 176 (270)
T ss_pred cHHHHHHHHHHHHHHHHHh--cccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHH----------H----
Confidence 7777888887777765432 2333 36689999999999988654 223566776655433210 0
Q ss_pred HHhhcCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccCh
Q 026829 96 IANILPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDP 175 (232)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~ 175 (232)
+... . .. .+. .+...+. .....-...+..++.|+|++.|..|.-.-.
T Consensus 177 L~~t----e------~g----~dl---gLt~~~a----------------e~~Scdl~~~~~v~~~ilVv~~~~espkli 223 (270)
T KOG4627|consen 177 LSNT----E------SG----NDL---GLTERNA----------------ESVSCDLWEYTDVTVWILVVAAEHESPKLI 223 (270)
T ss_pred HhCC----c------cc----ccc---Ccccchh----------------hhcCccHHHhcCceeeeeEeeecccCcHHH
Confidence 0000 0 00 000 0000000 000000123567889999999999986556
Q ss_pred hHHHHHHHHhcCCCccEEEcCCCccccccC
Q 026829 176 SVSKALYEKASSKDKKCILYKDAFHSLLEG 205 (232)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e 205 (232)
+..+.+..... ...+..++|.+|+-..|
T Consensus 224 eQnrdf~~q~~--~a~~~~f~n~~hy~I~~ 251 (270)
T KOG4627|consen 224 EQNRDFADQLR--KASFTLFKNYDHYDIIE 251 (270)
T ss_pred HhhhhHHHHhh--hcceeecCCcchhhHHH
Confidence 77777776653 57888999999986543
No 157
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.23 E-value=0.012 Score=47.47 Aligned_cols=67 Identities=15% Similarity=0.137 Sum_probs=44.0
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILV 73 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ 73 (232)
+-+||+|-|+++....-+--..+.-+...+-.+ .+ .+.+|-|-.||+.|+..+|.-+|++|.|+=+.
T Consensus 194 PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRL----g~--nkffiqGgDwGSiI~snlasLyPenV~GlHln 260 (469)
T KOG2565|consen 194 PSLPGYGWSDAPSKTGFNAAATARVMRKLMLRL----GY--NKFFIQGGDWGSIIGSNLASLYPENVLGLHLN 260 (469)
T ss_pred cCCCCcccCcCCccCCccHHHHHHHHHHHHHHh----Cc--ceeEeecCchHHHHHHHHHhhcchhhhHhhhc
Confidence 358999999876422002222232223332222 22 25789999999999999999999999987654
No 158
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.19 E-value=0.0016 Score=54.99 Aligned_cols=77 Identities=22% Similarity=0.275 Sum_probs=53.3
Q ss_pred CCCCCCCCCCccc------ccccHHHHHHHHHHHHHhhhcCC-CCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcC
Q 026829 2 DYPGFGLSAGLHG------YIPSFDRLVDDVIEHYSNIKEYP-EFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVA 74 (232)
Q Consensus 2 D~~G~G~S~~~~~------~~~~~~~~~~d~~~~~~~l~~~~-~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~a 74 (232)
.||-+|+|-+-.. ..-+.++-++|+..++..++... ...+.|++++|=|.||++|..+-.++|+.|.|.+-+|
T Consensus 66 EHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASS 145 (434)
T PF05577_consen 66 EHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASS 145 (434)
T ss_dssp --TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET
T ss_pred ehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecc
Confidence 5899999963211 12377899999999998887432 2345689999999999999999999999999998876
Q ss_pred cccc
Q 026829 75 PMCK 78 (232)
Q Consensus 75 p~~~ 78 (232)
.+..
T Consensus 146 apv~ 149 (434)
T PF05577_consen 146 APVQ 149 (434)
T ss_dssp --CC
T ss_pred ceee
Confidence 5443
No 159
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.15 E-value=0.00084 Score=52.38 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=31.2
Q ss_pred CCCeEEEecccchHHHHHHHhhCCCceeEEEEcCc
Q 026829 41 TLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAP 75 (232)
Q Consensus 41 ~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap 75 (232)
...+|++|.||||+-++.++.++|+.+.+.++++.
T Consensus 268 ~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 268 RSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred cceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 44799999999999999999999999999987654
No 160
>PLN02454 triacylglycerol lipase
Probab=97.14 E-value=0.0015 Score=53.86 Aligned_cols=54 Identities=15% Similarity=0.254 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhhhcCCCCCCC--CeEEEecccchHHHHHHHhhC------C--CceeEEEEcCccc
Q 026829 22 LVDDVIEHYSNIKEYPEFRTL--PSFLFGQSLGGAVALKVHLKQ------P--NAWSGAILVAPMC 77 (232)
Q Consensus 22 ~~~d~~~~~~~l~~~~~~~~~--~~~lvGhSmGg~ia~~~a~~~------p--~~v~~lil~ap~~ 77 (232)
..+++...+..+.+ .+++. .+++.||||||++|+.+|..- + -.|..++.-+|-.
T Consensus 208 ~r~qvl~~V~~l~~--~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRV 271 (414)
T PLN02454 208 ARSQLLAKIKELLE--RYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQV 271 (414)
T ss_pred HHHHHHHHHHHHHH--hCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcc
Confidence 44556666665543 23333 489999999999999988531 1 1255555556643
No 161
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.13 E-value=0.014 Score=43.88 Aligned_cols=58 Identities=24% Similarity=0.258 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHh--hCCCceeEEEEcCcccc
Q 026829 19 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHL--KQPNAWSGAILVAPMCK 78 (232)
Q Consensus 19 ~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~--~~p~~v~~lil~ap~~~ 78 (232)
+.+=++|+..+++++... ++.. .++|+|||.|..=.+.+.. ..|..++..|+-||++.
T Consensus 86 lk~D~edl~~l~~Hi~~~-~fSt-~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 86 LKDDVEDLKCLLEHIQLC-GFST-DVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred ccccHHHHHHHHHHhhcc-Cccc-ceEEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 344466666666655332 2222 6999999999987777752 34677888999999864
No 162
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.09 E-value=0.001 Score=54.04 Aligned_cols=51 Identities=16% Similarity=0.107 Sum_probs=33.4
Q ss_pred HHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcc
Q 026829 25 DVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 76 (232)
Q Consensus 25 d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~ 76 (232)
|....++.|...+......|-++|+||||..++.+|+..+ +|+..|.++-+
T Consensus 209 ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~~l 259 (390)
T PF12715_consen 209 DDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANGYL 259 (390)
T ss_dssp HHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES-B
T ss_pred HHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhhhhhh
Confidence 3345667776554444446889999999999999998764 68877765543
No 163
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.08 E-value=0.0012 Score=50.17 Aligned_cols=20 Identities=30% Similarity=0.278 Sum_probs=16.5
Q ss_pred CCeEEEecccchHHHHHHHh
Q 026829 42 LPSFLFGQSLGGAVALKVHL 61 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~ 61 (232)
.++.+|||||||.|+-.+..
T Consensus 78 ~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALG 97 (217)
T ss_pred ccceEEEecccHHHHHHHHH
Confidence 47899999999999966543
No 164
>PLN02571 triacylglycerol lipase
Probab=97.00 E-value=0.0018 Score=53.42 Aligned_cols=21 Identities=29% Similarity=0.395 Sum_probs=18.4
Q ss_pred CCeEEEecccchHHHHHHHhh
Q 026829 42 LPSFLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~~ 62 (232)
.++++.||||||++|+..|..
T Consensus 226 ~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 226 ISITICGHSLGAALATLNAVD 246 (413)
T ss_pred ccEEEeccchHHHHHHHHHHH
Confidence 368999999999999998764
No 165
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.88 E-value=0.0023 Score=52.16 Aligned_cols=77 Identities=27% Similarity=0.382 Sum_probs=56.1
Q ss_pred CCCCCCCCCCc----------ccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEE
Q 026829 2 DYPGFGLSAGL----------HGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAI 71 (232)
Q Consensus 2 D~~G~G~S~~~----------~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~li 71 (232)
.||=+|+|-+- .++. +-++-+.|..+.+..++........|++.+|-|.|||+|..+-.++|.-|.|.+
T Consensus 118 EHRyYGeS~PFG~~s~k~~~hlgyL-tseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAl 196 (492)
T KOG2183|consen 118 EHRYYGESLPFGSQSYKDARHLGYL-TSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGAL 196 (492)
T ss_pred ehhccccCCCCcchhccChhhhccc-cHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhh
Confidence 46778887421 1222 556777788888888876544445699999999999999999999999888765
Q ss_pred E-cCccccC
Q 026829 72 L-VAPMCKI 79 (232)
Q Consensus 72 l-~ap~~~~ 79 (232)
- +||...+
T Consensus 197 AaSAPvl~f 205 (492)
T KOG2183|consen 197 AASAPVLYF 205 (492)
T ss_pred hccCceEee
Confidence 4 4565543
No 166
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.88 E-value=0.017 Score=49.97 Aligned_cols=57 Identities=18% Similarity=0.240 Sum_probs=41.4
Q ss_pred cHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcccc
Q 026829 18 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 78 (232)
Q Consensus 18 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~ 78 (232)
||+|+++ +.++|.+..-.....+++.|-|.||++.-.++...|+.++++|.-.|+..
T Consensus 507 Tf~DFIa----~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 507 TFTDFIA----AARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred cHHHHHH----HHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 5555554 44444332111223589999999999999999999999999998888764
No 167
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=96.84 E-value=0.048 Score=42.06 Aligned_cols=54 Identities=20% Similarity=0.159 Sum_probs=41.8
Q ss_pred CcCCccEEEEeeCCCCccChhHHHHHHHHhcC--CCccEEEcCCCcccccc-CCChh
Q 026829 156 EKVSLPLLILHGENDTVTDPSVSKALYEKASS--KDKKCILYKDAFHSLLE-GEPDD 209 (232)
Q Consensus 156 ~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~H~~~~-e~~~~ 209 (232)
....+|-|.|.++.|.+++.+..+...+.... ..++.+.++++.|+-|. .+|++
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~ 231 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDR 231 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHH
Confidence 34579999999999999999877776655432 34788889999999987 45554
No 168
>COG0627 Predicted esterase [General function prediction only]
Probab=96.80 E-value=0.001 Score=53.26 Aligned_cols=37 Identities=30% Similarity=0.414 Sum_probs=32.9
Q ss_pred CeEEEecccchHHHHHHHhhCCCceeEEEEcCccccC
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKI 79 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~ 79 (232)
...|+||||||.=|+.+|+++|++++.+.-.+|....
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~ 189 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSP 189 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceeccccccccc
Confidence 5799999999999999999999999999887776543
No 169
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=96.70 E-value=0.0078 Score=48.68 Aligned_cols=57 Identities=21% Similarity=0.138 Sum_probs=42.9
Q ss_pred HhcCcCCccEEEEeeCCCCccChh-HHHHHHHHhcCCCccEEEcCCCccccccCCChh
Q 026829 153 RRLEKVSLPLLILHGENDTVTDPS-VSKALYEKASSKDKKCILYKDAFHSLLEGEPDD 209 (232)
Q Consensus 153 ~~l~~i~~PvLii~G~~D~~v~~~-~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~ 209 (232)
+.+.++++|++++-|..|...|+. .....+..+....+.+..++++.|.-+.|-.++
T Consensus 245 tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 245 TGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred ccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 457889999999999999987654 223334445545568889999999999876554
No 170
>PLN02847 triacylglycerol lipase
Probab=96.65 E-value=0.0024 Score=54.68 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhh
Q 026829 19 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 19 ~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~ 62 (232)
+..+.+.+...+..+.. .+++.+++++||||||++|..++..
T Consensus 230 ArwI~~~i~~~L~kal~--~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 230 ARWIAKLSTPCLLKALD--EYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHHHHHH--HCCCCeEEEeccChHHHHHHHHHHH
Confidence 33444444333333322 3456689999999999999988753
No 171
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.58 E-value=0.005 Score=50.09 Aligned_cols=36 Identities=17% Similarity=0.070 Sum_probs=31.3
Q ss_pred CCeEEEecccchHHHHHHHhhCC--CceeEEEEcCccc
Q 026829 42 LPSFLFGQSLGGAVALKVHLKQP--NAWSGAILVAPMC 77 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~~~p--~~v~~lil~ap~~ 77 (232)
.++.|+||||||.++..++...+ .+|+.++.+++.-
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred CceEEEeecccchhhHHHHhhcCccceEEEEEEeccCC
Confidence 37899999999999998888877 7899999988754
No 172
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=96.57 E-value=0.0031 Score=47.84 Aligned_cols=36 Identities=17% Similarity=0.243 Sum_probs=24.0
Q ss_pred HHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHh
Q 026829 23 VDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHL 61 (232)
Q Consensus 23 ~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~ 61 (232)
+.++.++++.+.+.. +.++.||||||||+++-.+..
T Consensus 59 ~~~l~~fI~~Vl~~T---GakVDIVgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 59 AKQLRAFIDAVLAYT---GAKVDIVGHSMGGTIARYYIK 94 (219)
T ss_dssp HHHHHHHHHHHHHHH---T--EEEEEETCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh---CCEEEEEEcCCcCHHHHHHHH
Confidence 345666666554321 337899999999999987754
No 173
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.57 E-value=0.0041 Score=50.39 Aligned_cols=57 Identities=16% Similarity=0.019 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCC--ceeEEEEcCcccc
Q 026829 22 LVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN--AWSGAILVAPMCK 78 (232)
Q Consensus 22 ~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~--~v~~lil~ap~~~ 78 (232)
+.+.+..++..|......+-..++|||||+||-||-.++.+... ++..++-+.|...
T Consensus 130 vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 130 VGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 33344455555542112222368999999999999998877666 7888888877643
No 174
>PLN02162 triacylglycerol lipase
Probab=96.53 E-value=0.0077 Score=50.29 Aligned_cols=22 Identities=41% Similarity=0.543 Sum_probs=18.6
Q ss_pred CCCCeEEEecccchHHHHHHHh
Q 026829 40 RTLPSFLFGQSLGGAVALKVHL 61 (232)
Q Consensus 40 ~~~~~~lvGhSmGg~ia~~~a~ 61 (232)
++.++++.|||+||++|+.+|.
T Consensus 276 p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 276 KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred CCceEEEEecChHHHHHHHHHH
Confidence 4557999999999999998754
No 175
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=96.49 E-value=0.0076 Score=46.74 Aligned_cols=36 Identities=33% Similarity=0.411 Sum_probs=31.9
Q ss_pred CeEEEecccchHHHHHHHhhC-----CCceeEEEEcCcccc
Q 026829 43 PSFLFGQSLGGAVALKVHLKQ-----PNAWSGAILVAPMCK 78 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~-----p~~v~~lil~ap~~~ 78 (232)
.+.|.|||=||-+|..+++.+ +.+++++|++.|+-+
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 578999999999999999887 568999999999753
No 176
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.46 E-value=0.099 Score=40.51 Aligned_cols=65 Identities=11% Similarity=0.136 Sum_probs=40.6
Q ss_pred hcCcCCcc-----EEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCcccc-ccCCChhHHHHHHHHHHHHHHhh
Q 026829 154 RLEKVSLP-----LLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSL-LEGEPDDMIIRVFADIISWLDDH 225 (232)
Q Consensus 154 ~l~~i~~P-----vLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~-~~e~~~~~~~~~~~~i~~~l~~~ 225 (232)
.+..+.+| +.++++++|.-+|...... ++++ -|++++..++ +||.. +.-+.+.++ ..|.+-|+..
T Consensus 296 ~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~-lQ~~-WPg~eVr~~e-gGHVsayl~k~dlfR----R~I~d~L~R~ 366 (371)
T KOG1551|consen 296 HVANFPVPVDPSLIIVVQAKEDAYIPRTGVRS-LQEI-WPGCEVRYLE-GGHVSAYLFKQDLFR----RAIVDGLDRL 366 (371)
T ss_pred hhhcCCCCCCCCeEEEEEecCCccccccCcHH-HHHh-CCCCEEEEee-cCceeeeehhchHHH----HHHHHHHHhh
Confidence 44555555 5778899999998755544 4443 4789999999 56764 333445543 3444544443
No 177
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.45 E-value=0.0054 Score=50.95 Aligned_cols=24 Identities=21% Similarity=0.158 Sum_probs=21.8
Q ss_pred CCeEEEecccchHHHHHHHhhCCC
Q 026829 42 LPSFLFGQSLGGAVALKVHLKQPN 65 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~~~p~ 65 (232)
.|++||+|||||.+.+.+...+++
T Consensus 182 kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 182 KKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred CceEEEecCCccHHHHHHHhcccc
Confidence 689999999999999999877776
No 178
>PLN00413 triacylglycerol lipase
Probab=96.43 E-value=0.0055 Score=51.28 Aligned_cols=23 Identities=39% Similarity=0.411 Sum_probs=19.6
Q ss_pred CCCCCeEEEecccchHHHHHHHh
Q 026829 39 FRTLPSFLFGQSLGGAVALKVHL 61 (232)
Q Consensus 39 ~~~~~~~lvGhSmGg~ia~~~a~ 61 (232)
+++.++++.|||+||++|..+|.
T Consensus 281 ~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 281 NPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred CCCCeEEEEecCHHHHHHHHHHH
Confidence 34567999999999999998874
No 179
>PLN02408 phospholipase A1
Probab=96.43 E-value=0.0048 Score=50.22 Aligned_cols=20 Identities=30% Similarity=0.346 Sum_probs=17.8
Q ss_pred CeEEEecccchHHHHHHHhh
Q 026829 43 PSFLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~ 62 (232)
.+++.||||||++|+.+|..
T Consensus 201 sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYD 220 (365)
T ss_pred eEEEeccchHHHHHHHHHHH
Confidence 58999999999999998764
No 180
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.43 E-value=0.0039 Score=53.51 Aligned_cols=36 Identities=11% Similarity=0.021 Sum_probs=26.8
Q ss_pred CCCeEEEecccchHHHHHHHhhC-----------CC----ceeEEEEcCcc
Q 026829 41 TLPSFLFGQSLGGAVALKVHLKQ-----------PN----AWSGAILVAPM 76 (232)
Q Consensus 41 ~~~~~lvGhSmGg~ia~~~a~~~-----------p~----~v~~lil~ap~ 76 (232)
+.+++|+||||||.+++.+...- ++ .|++.|.+++.
T Consensus 212 gkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 45899999999999999875421 11 37788888764
No 181
>PLN02310 triacylglycerol lipase
Probab=96.38 E-value=0.0055 Score=50.48 Aligned_cols=21 Identities=38% Similarity=0.499 Sum_probs=18.1
Q ss_pred CCeEEEecccchHHHHHHHhh
Q 026829 42 LPSFLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~~ 62 (232)
..+.+.||||||++|+.+|..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHH
Confidence 468999999999999988753
No 182
>PLN02324 triacylglycerol lipase
Probab=96.36 E-value=0.0091 Score=49.30 Aligned_cols=20 Identities=20% Similarity=0.328 Sum_probs=17.7
Q ss_pred CCeEEEecccchHHHHHHHh
Q 026829 42 LPSFLFGQSLGGAVALKVHL 61 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~ 61 (232)
..+++.||||||++|+..|.
T Consensus 215 ~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 215 ISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred ceEEEecCcHHHHHHHHHHH
Confidence 35889999999999999875
No 183
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.31 E-value=0.006 Score=51.57 Aligned_cols=21 Identities=38% Similarity=0.515 Sum_probs=18.1
Q ss_pred CCeEEEecccchHHHHHHHhh
Q 026829 42 LPSFLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~~ 62 (232)
..++|.||||||++|+..|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 468999999999999988753
No 184
>PLN02934 triacylglycerol lipase
Probab=96.23 E-value=0.008 Score=50.72 Aligned_cols=23 Identities=30% Similarity=0.442 Sum_probs=19.7
Q ss_pred CCCCCeEEEecccchHHHHHHHh
Q 026829 39 FRTLPSFLFGQSLGGAVALKVHL 61 (232)
Q Consensus 39 ~~~~~~~lvGhSmGg~ia~~~a~ 61 (232)
+++.++++.|||+||++|..++.
T Consensus 318 ~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 318 HKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred CCCCeEEEeccccHHHHHHHHHH
Confidence 45668999999999999998874
No 185
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.21 E-value=0.021 Score=41.79 Aligned_cols=53 Identities=11% Similarity=0.051 Sum_probs=36.8
Q ss_pred HHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcc
Q 026829 23 VDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 76 (232)
Q Consensus 23 ~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~ 76 (232)
..++..+++-|.... .++..+.++|||+|+.++-..+...+-.++-+|++++.
T Consensus 91 a~~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 91 APRLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 334555555554432 23446789999999999988876657788888887653
No 186
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.18 E-value=0.0042 Score=48.77 Aligned_cols=35 Identities=29% Similarity=0.437 Sum_probs=31.2
Q ss_pred CeEEEecccchHHHHHHHhhCCCceeEEEEcCccc
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 77 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~ 77 (232)
..+|.|-||||.+++..++++|+.|-.++.-||..
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 35899999999999999999999999888877754
No 187
>PLN02802 triacylglycerol lipase
Probab=96.16 E-value=0.0077 Score=50.80 Aligned_cols=21 Identities=43% Similarity=0.468 Sum_probs=18.1
Q ss_pred CCeEEEecccchHHHHHHHhh
Q 026829 42 LPSFLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~~ 62 (232)
..+++.||||||++|+.+|..
T Consensus 330 ~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADE 350 (509)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 368999999999999988753
No 188
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=96.15 E-value=0.011 Score=46.03 Aligned_cols=53 Identities=23% Similarity=0.412 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCc
Q 026829 19 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAP 75 (232)
Q Consensus 19 ~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap 75 (232)
++.+..++++.+..+++ .+++..+.|-|||+||++|..+..++. +-.+...+|
T Consensus 255 ~dryySa~ldI~~~v~~--~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 255 FDRYYSAALDILGAVRR--IYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred hcchhHHHHHHHHHHHH--hCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 33444555555555543 467778999999999999999887764 334555555
No 189
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=96.15 E-value=0.011 Score=46.03 Aligned_cols=53 Identities=23% Similarity=0.412 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCc
Q 026829 19 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAP 75 (232)
Q Consensus 19 ~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap 75 (232)
++.+..++++.+..+++ .+++..+.|-|||+||++|..+..++. +-.+...+|
T Consensus 255 ~dryySa~ldI~~~v~~--~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 255 FDRYYSAALDILGAVRR--IYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred hcchhHHHHHHHHHHHH--hCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 33444555555555543 467778999999999999999887764 334555555
No 190
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.10 E-value=0.019 Score=49.18 Aligned_cols=168 Identities=15% Similarity=0.144 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccccCCcCCCChHHHHHHHHHHHhh
Q 026829 20 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCKIADDMVPPFLVKQILIGIANI 99 (232)
Q Consensus 20 ~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~~~~~~~~~~~~~~~~~~~~~~ 99 (232)
+...+|.+++...|.++.-.....+-|-|-|=||.+.-.+..++||.+.++|.-.|...... +..+
T Consensus 478 q~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlR--------------Yh~l 543 (648)
T COG1505 478 QNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLR--------------YHLL 543 (648)
T ss_pred hhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhh--------------hccc
Confidence 44566666666666543211112467999999999998888899999999987766532100 0000
Q ss_pred cCCCccCCCCchhhHhhcCchhhhhhcccccccCCcccHHHHHHHHHHHHHHHHhcCcCCccEEEEeeCCCCccChhHHH
Q 026829 100 LPKHKLVPQKDLAEAAFRDLKNRELTKYNVIVYKDKPRLRTALELLKTTEGIERRLEKVSLPLLILHGENDTVTDPSVSK 179 (232)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~ 179 (232)
.. ....+ .-+.++.+ |.-+..+.-+.-+.++. ..+.=-|+||=.|..|.-|.|.+++
T Consensus 544 ~a-----G~sW~--~EYG~Pd~--------------P~d~~~l~~YSPy~nl~--~g~kYP~~LITTs~~DDRVHPaHar 600 (648)
T COG1505 544 TA-----GSSWI--AEYGNPDD--------------PEDRAFLLAYSPYHNLK--PGQKYPPTLITTSLHDDRVHPAHAR 600 (648)
T ss_pred cc-----chhhH--hhcCCCCC--------------HHHHHHHHhcCchhcCC--ccccCCCeEEEcccccccccchHHH
Confidence 00 00000 01112211 11111111111111111 1122368999999999999999999
Q ss_pred HHHHHhcCCCcc--EEEcCCCccccccCCChhHHHHHHHHHHHHHHhhh
Q 026829 180 ALYEKASSKDKK--CILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 226 (232)
Q Consensus 180 ~~~~~~~~~~~~--~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~ 226 (232)
+++.++...... +.+=.++||.---+. .........+..||.+.+
T Consensus 601 Kfaa~L~e~~~pv~~~e~t~gGH~g~~~~--~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 601 KFAAKLQEVGAPVLLREETKGGHGGAAPT--AEIARELADLLAFLLRTL 647 (648)
T ss_pred HHHHHHHhcCCceEEEeecCCcccCCCCh--HHHHHHHHHHHHHHHHhh
Confidence 998876543333 333355899976433 333345667778887654
No 191
>PLN02761 lipase class 3 family protein
Probab=95.96 E-value=0.0095 Score=50.42 Aligned_cols=20 Identities=30% Similarity=0.429 Sum_probs=17.6
Q ss_pred CCeEEEecccchHHHHHHHh
Q 026829 42 LPSFLFGQSLGGAVALKVHL 61 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~ 61 (232)
..+++.||||||++|+..|.
T Consensus 294 ~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAY 313 (527)
T ss_pred ceEEEeccchHHHHHHHHHH
Confidence 36899999999999998874
No 192
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.96 E-value=0.02 Score=46.15 Aligned_cols=53 Identities=15% Similarity=0.174 Sum_probs=34.8
Q ss_pred HHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHh----h----CCCceeEEEEcCccc
Q 026829 23 VDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHL----K----QPNAWSGAILVAPMC 77 (232)
Q Consensus 23 ~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~----~----~p~~v~~lil~ap~~ 77 (232)
..++..+++.+.... +-..++|++||||..+++.... + -+.+++-+||-+|-.
T Consensus 174 r~aLe~~lr~La~~~--~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 174 RPALERLLRYLATDK--PVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred HHHHHHHHHHHHhCC--CCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 334555566665432 2236899999999999988642 2 234677788888754
No 193
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=95.88 E-value=0.019 Score=47.19 Aligned_cols=52 Identities=27% Similarity=0.396 Sum_probs=39.1
Q ss_pred HHHHHHHhhhcC-CCCC-CCCeEEEecccchHHHHHHHhhCCCceeEEEEcCcc
Q 026829 25 DVIEHYSNIKEY-PEFR-TLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 76 (232)
Q Consensus 25 d~~~~~~~l~~~-~~~~-~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~ 76 (232)
|++.++..++.. .... +.|++++|+|-||.+|..+|--.|..++++|=-|..
T Consensus 165 D~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 165 DIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSY 218 (403)
T ss_pred HHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcc
Confidence 666666666543 1222 369999999999999999998899999998865544
No 194
>PLN02753 triacylglycerol lipase
Probab=95.83 E-value=0.015 Score=49.38 Aligned_cols=21 Identities=38% Similarity=0.520 Sum_probs=18.5
Q ss_pred CCCeEEEecccchHHHHHHHh
Q 026829 41 TLPSFLFGQSLGGAVALKVHL 61 (232)
Q Consensus 41 ~~~~~lvGhSmGg~ia~~~a~ 61 (232)
+..+++.||||||++|+..|.
T Consensus 311 ~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred CceEEEEccCHHHHHHHHHHH
Confidence 457899999999999999875
No 195
>PLN02719 triacylglycerol lipase
Probab=95.79 E-value=0.013 Score=49.61 Aligned_cols=20 Identities=40% Similarity=0.529 Sum_probs=17.7
Q ss_pred CCeEEEecccchHHHHHHHh
Q 026829 42 LPSFLFGQSLGGAVALKVHL 61 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~ 61 (232)
..+++.||||||++|+.+|.
T Consensus 298 ~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred ceEEEecCcHHHHHHHHHHH
Confidence 36899999999999999874
No 196
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=95.60 E-value=0.021 Score=49.04 Aligned_cols=74 Identities=19% Similarity=0.126 Sum_probs=50.8
Q ss_pred CCCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccc
Q 026829 1 MDYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 77 (232)
Q Consensus 1 ~D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~ 77 (232)
.|.||.|.|+|......+ + =++|-.+.+..+.+- .-.+..+-.+|-|.+|...+.+|+..|-.++.++-.++..
T Consensus 86 qDvRG~~~SeG~~~~~~~-~-E~~Dg~D~I~Wia~Q-pWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~ 159 (563)
T COG2936 86 QDVRGRGGSEGVFDPESS-R-EAEDGYDTIEWLAKQ-PWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLV 159 (563)
T ss_pred ecccccccCCcccceecc-c-cccchhHHHHHHHhC-CccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccc
Confidence 389999999986543223 2 233444444444332 2346689999999999999999998887778777665544
No 197
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=95.57 E-value=0.12 Score=44.89 Aligned_cols=55 Identities=20% Similarity=0.216 Sum_probs=39.6
Q ss_pred HHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCccc
Q 026829 23 VDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 77 (232)
Q Consensus 23 ~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~ 77 (232)
.+|.+....+|.+..-.......+.|-|-||.++-.++-.+|+.+.++|+-.|+.
T Consensus 530 f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 530 FDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred HHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 3344444455544322223357899999999999999999999999999877754
No 198
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=95.41 E-value=0.036 Score=44.61 Aligned_cols=34 Identities=18% Similarity=0.271 Sum_probs=29.4
Q ss_pred CeEEEecccchHHHHHHHhhCCC-ceeEEEEcCcc
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPN-AWSGAILVAPM 76 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~-~v~~lil~ap~ 76 (232)
.++|+||++|+..++++..+.+. .++++|+++|-
T Consensus 194 ~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 194 NIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred eEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 48999999999999999887664 48999999884
No 199
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.28 E-value=0.064 Score=42.18 Aligned_cols=35 Identities=23% Similarity=0.367 Sum_probs=31.1
Q ss_pred CCeEEEecccchHHHHHHHhhCCCceeEEEEcCcc
Q 026829 42 LPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 76 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~ 76 (232)
..+|+.|.|-||.++.++++++|+.+.++..++..
T Consensus 144 ~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~ 178 (312)
T COG3509 144 ARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGL 178 (312)
T ss_pred ceEEEEeeCcHHHHHHHHHhcCcccccceeeeecc
Confidence 36999999999999999999999999988777644
No 200
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=95.06 E-value=0.052 Score=42.00 Aligned_cols=36 Identities=28% Similarity=0.367 Sum_probs=29.0
Q ss_pred CeEEEecccchHHHHHHHhhCCC--ceeEEEEcCcccc
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPN--AWSGAILVAPMCK 78 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~--~v~~lil~ap~~~ 78 (232)
++.|+|||.||-.|..+|+.+.- .+.+||-+.|+.+
T Consensus 121 klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 121 KLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred eEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 57899999999999999987642 3667888888754
No 201
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=95.06 E-value=0.036 Score=45.13 Aligned_cols=23 Identities=35% Similarity=0.572 Sum_probs=19.7
Q ss_pred CCCCCeEEEecccchHHHHHHHh
Q 026829 39 FRTLPSFLFGQSLGGAVALKVHL 61 (232)
Q Consensus 39 ~~~~~~~lvGhSmGg~ia~~~a~ 61 (232)
+++..+++-||||||++|..+|.
T Consensus 168 ~~~~~i~vTGHSLGgAlA~laa~ 190 (336)
T KOG4569|consen 168 YPNYSIWVTGHSLGGALASLAAL 190 (336)
T ss_pred cCCcEEEEecCChHHHHHHHHHH
Confidence 45667999999999999998875
No 202
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.99 E-value=0.046 Score=40.31 Aligned_cols=66 Identities=20% Similarity=0.262 Sum_probs=48.0
Q ss_pred CccEEEEeeCCCCccChhH---HHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhh
Q 026829 159 SLPLLILHGENDTVTDPSV---SKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 225 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~---~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~ 225 (232)
++++|-|=|+.|.++.+-. +..++..++...+..++.+|+||+-.+. -..+.+.+.-.|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~-G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFN-GSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeeccc-chhhhhhhhHHHHHHHHhC
Confidence 5788889999999997643 3444444444456778899999997763 3456777888888888753
No 203
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=94.82 E-value=0.037 Score=40.78 Aligned_cols=39 Identities=15% Similarity=0.054 Sum_probs=30.2
Q ss_pred CCCCCeEEEecccchHHHHHHHhh------CCCceeEEEEcCccc
Q 026829 39 FRTLPSFLFGQSLGGAVALKVHLK------QPNAWSGAILVAPMC 77 (232)
Q Consensus 39 ~~~~~~~lvGhSmGg~ia~~~a~~------~p~~v~~lil~ap~~ 77 (232)
.++.+++|+|+|.||.|+..++.. ..++|.+++|.+-..
T Consensus 78 CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 78 CPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp STTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred CCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 456689999999999999999766 235788988876433
No 204
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=94.56 E-value=0.11 Score=42.28 Aligned_cols=36 Identities=25% Similarity=0.323 Sum_probs=27.1
Q ss_pred CCCeEEEecccchHHHHHHHhhCCCc-----eeEEEEcCcc
Q 026829 41 TLPSFLFGQSLGGAVALKVHLKQPNA-----WSGAILVAPM 76 (232)
Q Consensus 41 ~~~~~lvGhSmGg~ia~~~a~~~p~~-----v~~lil~ap~ 76 (232)
+.|+.|||||||+.+...+...-+++ |+-++|++.+
T Consensus 219 ~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gap 259 (345)
T PF05277_consen 219 ERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAP 259 (345)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCC
Confidence 44899999999999998876543333 7788887643
No 205
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=94.51 E-value=0.11 Score=39.87 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=25.7
Q ss_pred CCeEEEecccchHHHHHHHhhCCCceeEEEEcC
Q 026829 42 LPSFLFGQSLGGAVALKVHLKQPNAWSGAILVA 74 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~a 74 (232)
.|++=+|||||+.+-+.+....+..-+|-|+++
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccCcccceEEEe
Confidence 589999999999998888766654446767665
No 206
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=94.43 E-value=0.077 Score=39.81 Aligned_cols=38 Identities=21% Similarity=0.220 Sum_probs=26.3
Q ss_pred HHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhh
Q 026829 24 DDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 24 ~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~ 62 (232)
.|+.+++++-.++.. .+.|++|+|||=|+++.+++..+
T Consensus 78 ~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 78 SDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHH
Confidence 355555554433211 24599999999999999999755
No 207
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.30 E-value=0.16 Score=41.16 Aligned_cols=78 Identities=21% Similarity=0.282 Sum_probs=48.9
Q ss_pred CCCC-CCCCCCCccc-ccccHHHHHHHHHHHHHhh-hcCCCCCCCCeEEEecccchHHHHHHHhh----C------CCce
Q 026829 1 MDYP-GFGLSAGLHG-YIPSFDRLVDDVIEHYSNI-KEYPEFRTLPSFLFGQSLGGAVALKVHLK----Q------PNAW 67 (232)
Q Consensus 1 ~D~~-G~G~S~~~~~-~~~~~~~~~~d~~~~~~~l-~~~~~~~~~~~~lvGhSmGg~ia~~~a~~----~------p~~v 67 (232)
+|.| |-|.|..... ...+=+..++|+..++... ...+++.+.|.+|.|=|.||..+-.+|.+ . +=.+
T Consensus 7 iDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inL 86 (319)
T PLN02213 7 LDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINL 86 (319)
T ss_pred ecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceee
Confidence 4888 8898864322 1112123346666665443 34455667799999999999766555432 2 1258
Q ss_pred eEEEEcCcccc
Q 026829 68 SGAILVAPMCK 78 (232)
Q Consensus 68 ~~lil~ap~~~ 78 (232)
+|+++-+|+..
T Consensus 87 kGi~IGNg~t~ 97 (319)
T PLN02213 87 QGYMLGNPVTY 97 (319)
T ss_pred eEEEeCCCCCC
Confidence 89999888653
No 208
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=94.07 E-value=0.19 Score=41.20 Aligned_cols=58 Identities=28% Similarity=0.441 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHh--hCCC---ceeEEEEcCccccCC
Q 026829 21 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHL--KQPN---AWSGAILVAPMCKIA 80 (232)
Q Consensus 21 ~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~--~~p~---~v~~lil~ap~~~~~ 80 (232)
.-+.++++.++.+.+... ...++|+|-|.||.+++.+.+ ++++ .-+++||+||+..+.
T Consensus 176 tQL~qlv~~Y~~Lv~~~G--~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 176 TQLRQLVATYDYLVESEG--NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred hHHHHHHHHHHHHHhccC--CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 344566677777763222 346899999999999998754 2211 257999999998754
No 209
>COG3150 Predicted esterase [General function prediction only]
Probab=94.02 E-value=0.16 Score=36.52 Aligned_cols=58 Identities=21% Similarity=0.287 Sum_probs=37.7
Q ss_pred cCcCCcc-EEEEeeCC-CCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHH
Q 026829 155 LEKVSLP-LLILHGEN-DTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD 223 (232)
Q Consensus 155 l~~i~~P-vLii~G~~-D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~ 223 (232)
...++.| .++++... |.+.+.+.+...+. .+...+++|+.|-... .+.-++.|+.|+.
T Consensus 128 ~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~-----~~~~~V~dgg~H~F~~------f~~~l~~i~aF~g 187 (191)
T COG3150 128 FRELNRPRCLVLLSQTGDEVLDYRQAVAYYH-----PCYEIVWDGGDHKFKG------FSRHLQRIKAFKG 187 (191)
T ss_pred ccccCCCcEEEeecccccHHHHHHHHHHHhh-----hhhheeecCCCccccc------hHHhHHHHHHHhc
Confidence 3455555 56666666 99988776554442 4667788998887643 2346677777764
No 210
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=93.69 E-value=0.19 Score=40.61 Aligned_cols=61 Identities=16% Similarity=0.239 Sum_probs=44.6
Q ss_pred CccEEEEeeCCCCccChhHHHHHHHHhcC----------------------CC-ccEEEcCCCccccccCCChhHHHHHH
Q 026829 159 SLPLLILHGENDTVTDPSVSKALYEKASS----------------------KD-KKCILYKDAFHSLLEGEPDDMIIRVF 215 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~~~~~~~~~~~----------------------~~-~~~~~~~~~~H~~~~e~~~~~~~~~~ 215 (232)
.++|||..|..|.+++....+.+.+++.- .+ -+++++.||||+++ .+|+. .+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~----al 307 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNE----TF 307 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHH----HH
Confidence 48999999999999998877777766431 12 45667779999996 58875 44
Q ss_pred HHHHHHHHh
Q 026829 216 ADIISWLDD 224 (232)
Q Consensus 216 ~~i~~~l~~ 224 (232)
.-+-+|+..
T Consensus 308 ~m~~~fi~~ 316 (319)
T PLN02213 308 IMFQRWISG 316 (319)
T ss_pred HHHHHHHcC
Confidence 555667643
No 211
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.43 E-value=0.15 Score=43.92 Aligned_cols=37 Identities=24% Similarity=0.275 Sum_probs=24.1
Q ss_pred HHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhh
Q 026829 26 VIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 26 ~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~ 62 (232)
..+++..+.......+.|++.+||||||..+=.+.++
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLld 546 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLD 546 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHH
Confidence 3344444443323335699999999999988776543
No 212
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=93.31 E-value=0.35 Score=40.95 Aligned_cols=62 Identities=16% Similarity=0.179 Sum_probs=45.5
Q ss_pred CccEEEEeeCCCCccChhHHHHHHHHhcC-----------------------CCccEEEcCCCccccccCCChhHHHHHH
Q 026829 159 SLPLLILHGENDTVTDPSVSKALYEKASS-----------------------KDKKCILYKDAFHSLLEGEPDDMIIRVF 215 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~H~~~~e~~~~~~~~~~ 215 (232)
..++||..|+.|-+||.-..+.+.++... .+.++.++.|+||++..++|+. ..
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~----al 438 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPES----AL 438 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHH----HH
Confidence 48999999999999998877765443210 0134577889999999999875 44
Q ss_pred HHHHHHHHh
Q 026829 216 ADIISWLDD 224 (232)
Q Consensus 216 ~~i~~~l~~ 224 (232)
.-+.+||+.
T Consensus 439 ~m~~~fl~g 447 (454)
T KOG1282|consen 439 IMFQRFLNG 447 (454)
T ss_pred HHHHHHHcC
Confidence 556678764
No 213
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.25 E-value=0.17 Score=43.28 Aligned_cols=64 Identities=17% Similarity=0.332 Sum_probs=49.8
Q ss_pred CccEEEEeeCCCCccChhHHHHHHHHhcC----C------CccEEEcCCCccccccCCChhHHHHHHHHHHHHHHh
Q 026829 159 SLPLLILHGENDTVTDPSVSKALYEKASS----K------DKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDD 224 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~~~~~~~~~~~----~------~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~ 224 (232)
.-.+++.||..|++|++..+..++++... . -.++..+||.+|+.-..-+..+ .++..+.+|+.+
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~--d~l~aL~~WVE~ 426 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPF--DALTALVDWVEN 426 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCC--CHHHHHHHHHhC
Confidence 47799999999999999988888876431 1 2478999999999876534433 588999999863
No 214
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=92.40 E-value=0.41 Score=40.50 Aligned_cols=61 Identities=16% Similarity=0.239 Sum_probs=45.1
Q ss_pred CccEEEEeeCCCCccChhHHHHHHHHhcC----------------------CC-ccEEEcCCCccccccCCChhHHHHHH
Q 026829 159 SLPLLILHGENDTVTDPSVSKALYEKASS----------------------KD-KKCILYKDAFHSLLEGEPDDMIIRVF 215 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~~~~~~~~~~~----------------------~~-~~~~~~~~~~H~~~~e~~~~~~~~~~ 215 (232)
.++|||..|..|-++|....+.+.+++.- .+ -+++++-||||++. .+|+. ++
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~----al 421 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNE----TF 421 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHH----HH
Confidence 58999999999999998887777665431 12 45677889999996 57875 55
Q ss_pred HHHHHHHHh
Q 026829 216 ADIISWLDD 224 (232)
Q Consensus 216 ~~i~~~l~~ 224 (232)
.-+.+|++.
T Consensus 422 ~m~~~Fi~~ 430 (433)
T PLN03016 422 IMFQRWISG 430 (433)
T ss_pred HHHHHHHcC
Confidence 556667753
No 215
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.23 E-value=1.3 Score=31.76 Aligned_cols=31 Identities=23% Similarity=0.049 Sum_probs=23.3
Q ss_pred eEEEecccchHHHHHHHhhCCCceeEEEEcCcc
Q 026829 44 SFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 76 (232)
Q Consensus 44 ~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~ 76 (232)
+.||.+|||=.||=++....+ +++.+-++..
T Consensus 59 irlvAwSMGVwvAeR~lqg~~--lksatAiNGT 89 (214)
T COG2830 59 IRLVAWSMGVWVAERVLQGIR--LKSATAINGT 89 (214)
T ss_pred hhhhhhhHHHHHHHHHHhhcc--ccceeeecCC
Confidence 689999999999999875543 5666666543
No 216
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=91.89 E-value=0.59 Score=39.58 Aligned_cols=76 Identities=17% Similarity=0.159 Sum_probs=56.9
Q ss_pred CCCCCCCCCCccc------ccccHHHHHHHHHHHHHhhhcCCCCCCC-CeEEEecccchHHHHHHHhhCCCceeEEEEcC
Q 026829 2 DYPGFGLSAGLHG------YIPSFDRLVDDVIEHYSNIKEYPEFRTL-PSFLFGQSLGGAVALKVHLKQPNAWSGAILVA 74 (232)
Q Consensus 2 D~~G~G~S~~~~~------~~~~~~~~~~d~~~~~~~l~~~~~~~~~-~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~a 74 (232)
.||=+|+|..... ..-+.++.+.|+++++..++....+.+. |-+.+|=|.-|.++..+-..+|+.+-|.|-++
T Consensus 125 EHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASS 204 (514)
T KOG2182|consen 125 EHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASS 204 (514)
T ss_pred eeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccc
Confidence 4788898853221 1225678888999998888765444444 78899999999999999999999988887765
Q ss_pred ccc
Q 026829 75 PMC 77 (232)
Q Consensus 75 p~~ 77 (232)
.+.
T Consensus 205 apv 207 (514)
T KOG2182|consen 205 APV 207 (514)
T ss_pred cce
Confidence 433
No 217
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=91.82 E-value=0.41 Score=38.24 Aligned_cols=73 Identities=29% Similarity=0.492 Sum_probs=51.4
Q ss_pred CCCCC--CCcccccccHHHHHHHHHHHHHhhh-cCCCCCCCCeEEEecccchHHHHHHHhh------CC---CceeEEEE
Q 026829 5 GFGLS--AGLHGYIPSFDRLVDDVIEHYSNIK-EYPEFRTLPSFLFGQSLGGAVALKVHLK------QP---NAWSGAIL 72 (232)
Q Consensus 5 G~G~S--~~~~~~~~~~~~~~~d~~~~~~~l~-~~~~~~~~~~~lvGhSmGg~ia~~~a~~------~p---~~v~~lil 72 (232)
|-|.| ++...+..+..+.+.|+.+.++.+- ..+++...|.+|++-|.||-+|..+++. +. -.+.+++|
T Consensus 82 GaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaL 161 (414)
T KOG1283|consen 82 GAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVAL 161 (414)
T ss_pred cCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEc
Confidence 56666 3433445567888889888887653 4566777899999999999999887653 22 23678888
Q ss_pred cCccc
Q 026829 73 VAPMC 77 (232)
Q Consensus 73 ~ap~~ 77 (232)
-.|+.
T Consensus 162 GDSWI 166 (414)
T KOG1283|consen 162 GDSWI 166 (414)
T ss_pred cCccc
Confidence 65554
No 218
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=91.55 E-value=0.12 Score=41.11 Aligned_cols=34 Identities=21% Similarity=0.362 Sum_probs=26.2
Q ss_pred CeEEEecccchHHHHHHHhhCCCceeEEEEcCccc
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMC 77 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~ 77 (232)
.+.++|||+||+.++.....+- .+++.|+...+-
T Consensus 242 ~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~WM 275 (399)
T KOG3847|consen 242 QAAVIGHSFGGATSIASSSSHT-DFRCAIALDAWM 275 (399)
T ss_pred hhhheeccccchhhhhhhcccc-ceeeeeeeeeee
Confidence 4689999999999998876654 588887765543
No 219
>PLN02209 serine carboxypeptidase
Probab=91.46 E-value=0.58 Score=39.61 Aligned_cols=60 Identities=15% Similarity=0.192 Sum_probs=44.6
Q ss_pred CccEEEEeeCCCCccChhHHHHHHHHhcC----------------------CC-ccEEEcCCCccccccCCChhHHHHHH
Q 026829 159 SLPLLILHGENDTVTDPSVSKALYEKASS----------------------KD-KKCILYKDAFHSLLEGEPDDMIIRVF 215 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~~~~~~~~~~~----------------------~~-~~~~~~~~~~H~~~~e~~~~~~~~~~ 215 (232)
.++||+..|..|-+++.-..+.+.+.+.- .+ -+++++-||||++. .+|++ ++
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~----al 425 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEE----SS 425 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHH----HH
Confidence 58999999999999998877777665431 12 56677889999996 58875 45
Q ss_pred HHHHHHHH
Q 026829 216 ADIISWLD 223 (232)
Q Consensus 216 ~~i~~~l~ 223 (232)
.-+.+|+.
T Consensus 426 ~m~~~fi~ 433 (437)
T PLN02209 426 IMFQRWIS 433 (437)
T ss_pred HHHHHHHc
Confidence 55566764
No 220
>PLN02633 palmitoyl protein thioesterase family protein
Probab=90.61 E-value=1.3 Score=35.36 Aligned_cols=33 Identities=21% Similarity=0.029 Sum_probs=29.0
Q ss_pred CeEEEecccchHHHHHHHhhCCC--ceeEEEEcCc
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPN--AWSGAILVAP 75 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~--~v~~lil~ap 75 (232)
-+.++|+|=||.++-.++.+.|+ .|+.+|-++.
T Consensus 95 G~naIGfSQGGlflRa~ierc~~~p~V~nlISlgg 129 (314)
T PLN02633 95 GYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAG 129 (314)
T ss_pred cEEEEEEccchHHHHHHHHHCCCCCCcceEEEecC
Confidence 48899999999999999999887 4999998764
No 221
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=90.47 E-value=0.76 Score=38.89 Aligned_cols=73 Identities=19% Similarity=0.290 Sum_probs=43.7
Q ss_pred CCCCCCCCccc--ccccHHHHHHHHHHHHHhh-hcCCCCCCCCeEEEecccchHHHHHHHhh----C------CCceeEE
Q 026829 4 PGFGLSAGLHG--YIPSFDRLVDDVIEHYSNI-KEYPEFRTLPSFLFGQSLGGAVALKVHLK----Q------PNAWSGA 70 (232)
Q Consensus 4 ~G~G~S~~~~~--~~~~~~~~~~d~~~~~~~l-~~~~~~~~~~~~lvGhSmGg~ia~~~a~~----~------p~~v~~l 70 (232)
-|.|.|..... ...+.+ -++++.+++... ...+++.+.|++|+|.|.||..+-.+|.+ . +=.++|+
T Consensus 125 vGtGfSy~~~~~~~~~d~~-~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi 203 (433)
T PLN03016 125 VGSGFSYSKTPIDKTGDIS-EVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGY 203 (433)
T ss_pred CCCCccCCCCCCCccCCHH-HHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceee
Confidence 48888853321 111222 235555555443 33445556789999999999865555432 1 1258899
Q ss_pred EEcCccc
Q 026829 71 ILVAPMC 77 (232)
Q Consensus 71 il~ap~~ 77 (232)
++-+|..
T Consensus 204 ~iGNg~t 210 (433)
T PLN03016 204 MLGNPVT 210 (433)
T ss_pred EecCCCc
Confidence 9988864
No 222
>PLN02209 serine carboxypeptidase
Probab=90.25 E-value=0.79 Score=38.83 Aligned_cols=75 Identities=21% Similarity=0.278 Sum_probs=45.3
Q ss_pred CCCCCCCCccc-ccccHHHHHHHHHHHHHhh-hcCCCCCCCCeEEEecccchHHHHHHHh----hC------CCceeEEE
Q 026829 4 PGFGLSAGLHG-YIPSFDRLVDDVIEHYSNI-KEYPEFRTLPSFLFGQSLGGAVALKVHL----KQ------PNAWSGAI 71 (232)
Q Consensus 4 ~G~G~S~~~~~-~~~~~~~~~~d~~~~~~~l-~~~~~~~~~~~~lvGhSmGg~ia~~~a~----~~------p~~v~~li 71 (232)
.|.|.|..... ...+-++-++++..++... ...+++...|++|.|.|.||.-+-.+|. .. +=.++|++
T Consensus 127 vGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~ 206 (437)
T PLN02209 127 VGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYV 206 (437)
T ss_pred CCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEE
Confidence 47888753221 1122234456776666543 3344555668999999999975555542 11 12478999
Q ss_pred EcCcccc
Q 026829 72 LVAPMCK 78 (232)
Q Consensus 72 l~ap~~~ 78 (232)
+.+|...
T Consensus 207 igng~td 213 (437)
T PLN02209 207 LGNPITH 213 (437)
T ss_pred ecCcccC
Confidence 9888653
No 223
>PLN02606 palmitoyl-protein thioesterase
Probab=90.18 E-value=0.93 Score=36.15 Aligned_cols=54 Identities=17% Similarity=0.058 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCC--ceeEEEEcCc
Q 026829 21 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPN--AWSGAILVAP 75 (232)
Q Consensus 21 ~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~--~v~~lil~ap 75 (232)
.+.+++..+.+.++..+...+ -+.++|+|=||.++-.++.+.|+ .|+.+|-++.
T Consensus 75 ~~~~Qv~~vce~l~~~~~L~~-G~naIGfSQGglflRa~ierc~~~p~V~nlISlgg 130 (306)
T PLN02606 75 PLRQQASIACEKIKQMKELSE-GYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGG 130 (306)
T ss_pred CHHHHHHHHHHHHhcchhhcC-ceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecC
Confidence 334444444444444333332 48899999999999999999887 4999988754
No 224
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.64 E-value=1.4 Score=33.19 Aligned_cols=33 Identities=21% Similarity=0.395 Sum_probs=26.6
Q ss_pred CeEEEecccchHHHHHHHhhCCC--ceeEEEEcCc
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPN--AWSGAILVAP 75 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~--~v~~lil~ap 75 (232)
.++++.||.||...+.+..++|+ +|-++.|...
T Consensus 191 sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs 225 (297)
T KOG3967|consen 191 SVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDS 225 (297)
T ss_pred eEEEEEeccCChhHHHHHHhcCCccceEEEEeecc
Confidence 58999999999999999999885 4556665533
No 225
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=88.99 E-value=0.2 Score=43.04 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=27.0
Q ss_pred CeEEEecccchHHHHHHHhh--CCCceeEEEEcCcc
Q 026829 43 PSFLFGQSLGGAVALKVHLK--QPNAWSGAILVAPM 76 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~--~p~~v~~lil~ap~ 76 (232)
++.|+|||.||..+..++.. .+..++++|+.+..
T Consensus 177 ~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~ 212 (493)
T cd00312 177 SVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGS 212 (493)
T ss_pred eEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCC
Confidence 68999999999999888765 34468888887653
No 226
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=88.01 E-value=1.2 Score=34.17 Aligned_cols=23 Identities=35% Similarity=0.416 Sum_probs=19.2
Q ss_pred CCCCeEEEecccchHHHHHHHhh
Q 026829 40 RTLPSFLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 40 ~~~~~~lvGhSmGg~ia~~~a~~ 62 (232)
.+.+++++|+|.|+.|+...+.+
T Consensus 46 ~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 46 AGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CCCCEEEEEECHHHHHHHHHHHH
Confidence 35689999999999999887643
No 227
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=87.75 E-value=0.45 Score=40.74 Aligned_cols=35 Identities=29% Similarity=0.476 Sum_probs=32.8
Q ss_pred eEEEecccchHHHHHHHhhCCCceeEEEEcCcccc
Q 026829 44 SFLFGQSLGGAVALKVHLKQPNAWSGAILVAPMCK 78 (232)
Q Consensus 44 ~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~~~ 78 (232)
-|..|-|-||.-++..|.++|+.++|+|..+|...
T Consensus 117 sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 117 SYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred eEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHH
Confidence 58999999999999999999999999999999754
No 228
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=87.17 E-value=2.3 Score=33.63 Aligned_cols=33 Identities=15% Similarity=0.017 Sum_probs=26.2
Q ss_pred CeEEEecccchHHHHHHHhhCCC-ceeEEEEcCc
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPN-AWSGAILVAP 75 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~-~v~~lil~ap 75 (232)
-+.++|+|=||.+.-.++.+.|+ .|+-+|-++.
T Consensus 81 G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlgg 114 (279)
T PF02089_consen 81 GFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGG 114 (279)
T ss_dssp -EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES-
T ss_pred ceeeeeeccccHHHHHHHHHCCCCCceeEEEecC
Confidence 48999999999999999988775 5888888764
No 229
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.33 E-value=0.24 Score=35.89 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=29.2
Q ss_pred eEEEecccchHHHHHHHhhCCCceeEEEEcCcc
Q 026829 44 SFLFGQSLGGAVALKVHLKQPNAWSGAILVAPM 76 (232)
Q Consensus 44 ~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap~ 76 (232)
..+-|-||||.-|..+..++|+.+.|+|-++..
T Consensus 103 ~~~sgcsmGayhA~nfvfrhP~lftkvialSGv 135 (227)
T COG4947 103 TIVSGCSMGAYHAANFVFRHPHLFTKVIALSGV 135 (227)
T ss_pred ccccccchhhhhhhhhheeChhHhhhheeecce
Confidence 467899999999999999999999999976654
No 230
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=82.51 E-value=1.6 Score=37.68 Aligned_cols=52 Identities=25% Similarity=0.205 Sum_probs=33.0
Q ss_pred HHHHHHHhhhcCCC-CCCC--CeEEEecccchHHHHHHHhh--CCCceeEEEEcCcc
Q 026829 25 DVIEHYSNIKEYPE-FRTL--PSFLFGQSLGGAVALKVHLK--QPNAWSGAILVAPM 76 (232)
Q Consensus 25 d~~~~~~~l~~~~~-~~~~--~~~lvGhSmGg~ia~~~a~~--~p~~v~~lil~ap~ 76 (232)
|.+.+|+.+++... +.+. .|.|+|||-||..+..+... ....++++|+.|..
T Consensus 188 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 188 DQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 44445555544322 3333 47899999999988877654 23579999998764
No 231
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=82.23 E-value=4 Score=34.10 Aligned_cols=73 Identities=21% Similarity=0.114 Sum_probs=50.5
Q ss_pred CCCCCCCCCCcccc--cccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEE-cCccc
Q 026829 2 DYPGFGLSAGLHGY--IPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAIL-VAPMC 77 (232)
Q Consensus 2 D~~G~G~S~~~~~~--~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil-~ap~~ 77 (232)
.+|=||.|...... .-++.+-+.|....+..++. -+ ..+=+=-|-|=||+.++.+-.-+|+-|++.|- +||..
T Consensus 95 EhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~--iY-~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 95 EHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKP--IY-PGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred EEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHh--hc-cCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 35667877543221 12667778888777777754 23 23456779999999999887779999998665 67754
No 232
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=82.19 E-value=1.7 Score=35.61 Aligned_cols=48 Identities=19% Similarity=0.376 Sum_probs=41.1
Q ss_pred CcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCcccccc
Q 026829 156 EKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE 204 (232)
Q Consensus 156 ~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 204 (232)
.++.+|-.|+-|..|...+++.+...+..++. .+-+..+||..|..-+
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG-~kaLrmvPN~~H~~~n 373 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPG-EKALRMVPNDPHNLIN 373 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCC-ceeeeeCCCCcchhhH
Confidence 46789999999999999999988888887754 6789999999998765
No 233
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=80.27 E-value=3 Score=33.15 Aligned_cols=70 Identities=17% Similarity=0.247 Sum_probs=51.7
Q ss_pred CccEEEEeeCCCCccC---hhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhhccC
Q 026829 159 SLPLLILHGENDTVTD---PSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHSRSS 229 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~---~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~~~~ 229 (232)
++-.+-+-|++|.+.- ...+.+++..++..-++.+.=+++||.-.. .-.++.+.+.-.|.+|+.++.++.
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVF-nGsrfr~eIvPri~dFI~~~d~~~ 411 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVF-NGSRFREEIVPRIRDFIRRYDRSN 411 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCcccee-ccchHHHHHHHHHHHHHHHhCccc
Confidence 4667889999999874 345566666665444567788999999766 334677788888999998877654
No 234
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=80.04 E-value=1.9 Score=36.66 Aligned_cols=53 Identities=26% Similarity=0.318 Sum_probs=33.5
Q ss_pred HHHHHHHhhhcCCC-CCCC--CeEEEecccchHHHHHHHhhCCC---ceeEEEEcCcccc
Q 026829 25 DVIEHYSNIKEYPE-FRTL--PSFLFGQSLGGAVALKVHLKQPN---AWSGAILVAPMCK 78 (232)
Q Consensus 25 d~~~~~~~l~~~~~-~~~~--~~~lvGhSmGg~ia~~~a~~~p~---~v~~lil~ap~~~ 78 (232)
|.+.+++.++.+.+ +.+. .|.|+|+|-||+.++.+.+ -|. .++++|+.|+...
T Consensus 160 DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla-~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 160 DQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLA-VPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhc-CccchHHHHHHHHhCCCCC
Confidence 44445555543321 2222 4789999999998887753 343 5778888877653
No 235
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=76.98 E-value=5.9 Score=34.77 Aligned_cols=47 Identities=17% Similarity=0.210 Sum_probs=33.2
Q ss_pred CcC-CccEEEEeeCCCCccChhHHHHHHHHh-c---C--CCccEEEcCCCcccc
Q 026829 156 EKV-SLPLLILHGENDTVTDPSVSKALYEKA-S---S--KDKKCILYKDAFHSL 202 (232)
Q Consensus 156 ~~i-~~PvLii~G~~D~~v~~~~~~~~~~~~-~---~--~~~~~~~~~~~~H~~ 202 (232)
.++ .+|++|+||..|.++|+.+..+-|-.. . . ....++.++++-|+-
T Consensus 551 g~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfD 604 (690)
T PF10605_consen 551 GNLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFD 604 (690)
T ss_pred CCcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeech
Confidence 455 799999999999999976543333221 1 1 235788899999984
No 236
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=76.05 E-value=11 Score=29.73 Aligned_cols=32 Identities=25% Similarity=0.132 Sum_probs=25.5
Q ss_pred CeEEEecccchHHHHHHHhhCCC-ceeEEEEcC
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPN-AWSGAILVA 74 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~-~v~~lil~a 74 (232)
-+.++|.|=||.++-.++..-|+ .|+.+|-++
T Consensus 93 Gynivg~SQGglv~Raliq~cd~ppV~n~ISL~ 125 (296)
T KOG2541|consen 93 GYNIVGYSQGGLVARALIQFCDNPPVKNFISLG 125 (296)
T ss_pred ceEEEEEccccHHHHHHHHhCCCCCcceeEecc
Confidence 48899999999999988876544 477777765
No 237
>COG0218 Predicted GTPase [General function prediction only]
Probab=72.64 E-value=2 Score=32.11 Aligned_cols=24 Identities=13% Similarity=0.349 Sum_probs=18.7
Q ss_pred hcCcCCccEEEEeeCCCCccChhH
Q 026829 154 RLEKVSLPLLILHGENDTVTDPSV 177 (232)
Q Consensus 154 ~l~~i~~PvLii~G~~D~~v~~~~ 177 (232)
.+....+|++++.-+.|++-..+.
T Consensus 130 ~l~~~~i~~~vv~tK~DKi~~~~~ 153 (200)
T COG0218 130 FLLELGIPVIVVLTKADKLKKSER 153 (200)
T ss_pred HHHHcCCCeEEEEEccccCChhHH
Confidence 345678999999999999876444
No 238
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=72.57 E-value=11 Score=36.28 Aligned_cols=67 Identities=21% Similarity=0.268 Sum_probs=40.8
Q ss_pred CCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhh--CCCceeEEEEcC
Q 026829 3 YPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLK--QPNAWSGAILVA 74 (232)
Q Consensus 3 ~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~--~p~~v~~lil~a 74 (232)
.|-||..--..-...+++..+.-.+..++.+ -+..|.-|+|.|.|+.++..+|.. ..+....+||+.
T Consensus 2148 ~PaYglQ~T~~vP~dSies~A~~yirqirkv-----QP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillD 2216 (2376)
T KOG1202|consen 2148 IPAYGLQCTEAVPLDSIESLAAYYIRQIRKV-----QPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLD 2216 (2376)
T ss_pred CcchhhhccccCCcchHHHHHHHHHHHHHhc-----CCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEec
Confidence 3556643211112235666665555555543 245688899999999999998743 333345688864
No 239
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=72.02 E-value=19 Score=30.75 Aligned_cols=74 Identities=18% Similarity=0.266 Sum_probs=47.3
Q ss_pred CCCCCCCcc--cccccHHHHHHHHHHHHH-hhhcCCCCCCCCeEEEecccchHHHHHHHh----hC------CCceeEEE
Q 026829 5 GFGLSAGLH--GYIPSFDRLVDDVIEHYS-NIKEYPEFRTLPSFLFGQSLGGAVALKVHL----KQ------PNAWSGAI 71 (232)
Q Consensus 5 G~G~S~~~~--~~~~~~~~~~~d~~~~~~-~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~----~~------p~~v~~li 71 (232)
|-|.|-... ....+-+..++|..+++. .+.+.+++.+.+++|.|-|.+|...-.+|. .. +-.++|++
T Consensus 128 GvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~ 207 (454)
T KOG1282|consen 128 GVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYA 207 (454)
T ss_pred cCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEE
Confidence 667664221 122244566777766653 345566677789999999999965555543 22 12588999
Q ss_pred EcCcccc
Q 026829 72 LVAPMCK 78 (232)
Q Consensus 72 l~ap~~~ 78 (232)
+-+|...
T Consensus 208 IGNg~td 214 (454)
T KOG1282|consen 208 IGNGLTD 214 (454)
T ss_pred ecCcccC
Confidence 9888765
No 240
>COG5023 Tubulin [Cytoskeleton]
Probab=61.31 E-value=15 Score=30.32 Aligned_cols=63 Identities=24% Similarity=0.286 Sum_probs=38.7
Q ss_pred cccccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHH--------HHhhCCCceeEEEEcCcccc
Q 026829 14 GYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALK--------VHLKQPNAWSGAILVAPMCK 78 (232)
Q Consensus 14 ~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~--------~a~~~p~~v~~lil~ap~~~ 78 (232)
||..-=..+++|+.+.++..... ..++.=|++=||+||....- +..++|.++.--.-+-|...
T Consensus 104 GhYtvG~e~~ddvmd~IrreAd~--cD~LqGF~l~HS~gGGTGSG~GslLLerl~~eypkK~~~tfSV~P~p~ 174 (443)
T COG5023 104 GHYTVGKEIIDDVMDMIRREADG--CDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPKKIKLTFSVFPAPK 174 (443)
T ss_pred cccchhHHHHHHHHHHHHHHhhc--CccccceeeeeeccCcCcccHHHHHHHHHHHhcchhheeEEEeccCCc
Confidence 44323367888888888765432 33556699999998765433 34567876554444445433
No 241
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=61.07 E-value=6.7 Score=31.70 Aligned_cols=18 Identities=33% Similarity=0.532 Sum_probs=16.3
Q ss_pred EEEecccchHHHHHHHhh
Q 026829 45 FLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 45 ~lvGhSmGg~ia~~~a~~ 62 (232)
++.|-|+||.||..++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 699999999999999864
No 242
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=59.27 E-value=5.5 Score=32.17 Aligned_cols=18 Identities=39% Similarity=0.562 Sum_probs=15.2
Q ss_pred CeEEEecccchHHHHHHH
Q 026829 43 PSFLFGQSLGGAVALKVH 60 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a 60 (232)
|-+++|||+|=..|+.++
T Consensus 85 P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 85 PDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp ESEEEESTTHHHHHHHHT
T ss_pred cceeeccchhhHHHHHHC
Confidence 678999999988887665
No 243
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=58.36 E-value=7 Score=30.91 Aligned_cols=18 Identities=44% Similarity=0.597 Sum_probs=15.6
Q ss_pred CeEEEecccchHHHHHHH
Q 026829 43 PSFLFGQSLGGAVALKVH 60 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a 60 (232)
|..++|||+|=..|+.++
T Consensus 84 p~~v~GhS~GE~aAa~~a 101 (290)
T TIGR00128 84 PDFAAGHSLGEYSALVAA 101 (290)
T ss_pred CCEEeecCHHHHHHHHHh
Confidence 778999999998887765
No 244
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=58.15 E-value=64 Score=25.40 Aligned_cols=49 Identities=12% Similarity=0.142 Sum_probs=33.9
Q ss_pred CCccEEEEeeCCCC---------ccCh-hHHHHHHHHhcCCCccEEEcCCCccccccCCC
Q 026829 158 VSLPLLILHGENDT---------VTDP-SVSKALYEKASSKDKKCILYKDAFHSLLEGEP 207 (232)
Q Consensus 158 i~~PvLii~G~~D~---------~v~~-~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~ 207 (232)
..+|+++|-.+.+. ..|. .....++.+.. +.+-..+..+.||+=+.+..
T Consensus 153 ~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~-~p~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 153 FSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECK-PPSWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred CCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcC-CCEEEEEeCCCCchHhhcCC
Confidence 56999999888885 2232 24456777654 35666778999999887654
No 245
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=58.10 E-value=13 Score=29.95 Aligned_cols=20 Identities=15% Similarity=0.225 Sum_probs=17.2
Q ss_pred eEEEecccchHHHHHHHhhC
Q 026829 44 SFLFGQSLGGAVALKVHLKQ 63 (232)
Q Consensus 44 ~~lvGhSmGg~ia~~~a~~~ 63 (232)
-.++|-|||+.++..++...
T Consensus 45 d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 45 DMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred CEEEEECHHHHHHHHHHcCC
Confidence 36999999999999998653
No 246
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=58.07 E-value=34 Score=25.92 Aligned_cols=54 Identities=19% Similarity=0.282 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHH--------hhCCCceeEEEEcCcc
Q 026829 21 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVH--------LKQPNAWSGAILVAPM 76 (232)
Q Consensus 21 ~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a--------~~~p~~v~~lil~ap~ 76 (232)
...+++.+.++...+.. .+.+.+++-|||||....-++ ..+|......+.+-|.
T Consensus 105 ~~~~~~~~~ir~~~e~~--d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~~~~~~~~ilP~ 166 (216)
T PF00091_consen 105 EALEEILEQIRKEIEKC--DSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPKKPIISFSILPF 166 (216)
T ss_dssp HHHHHHHHHHHHHHHTS--TTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTTSEEEEEEEE-C
T ss_pred ccccccccccchhhccc--cccccceecccccceeccccccccchhhhccccccceeecccccc
Confidence 34555555555544321 245689999999987544332 3466655555544554
No 247
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=58.03 E-value=29 Score=30.07 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=24.1
Q ss_pred CCCeEEEecccchHHHHHHHhh-----CCCceeEEEEcC
Q 026829 41 TLPSFLFGQSLGGAVALKVHLK-----QPNAWSGAILVA 74 (232)
Q Consensus 41 ~~~~~lvGhSmGg~ia~~~a~~-----~p~~v~~lil~a 74 (232)
..|+.|||+|+|+.+-..+... .-.-|.-++|.+
T Consensus 446 ~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~G 484 (633)
T KOG2385|consen 446 NRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFG 484 (633)
T ss_pred CCceeEeeeccchHHHHHHHHHHhhcccccceeeeeecc
Confidence 4589999999999999866542 122355677764
No 248
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=57.47 E-value=8.2 Score=33.09 Aligned_cols=35 Identities=26% Similarity=0.360 Sum_probs=24.0
Q ss_pred CeEEEecccchHHHHHHHhhCC---CceeEEEEcCccc
Q 026829 43 PSFLFGQSLGGAVALKVHLKQP---NAWSGAILVAPMC 77 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p---~~v~~lil~ap~~ 77 (232)
|.+|+|-|.||.-+-.+|..-- ...+++|++++..
T Consensus 199 ~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 199 PKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred ceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 7899999999987777764322 2345666665543
No 249
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=57.18 E-value=17 Score=28.02 Aligned_cols=55 Identities=15% Similarity=0.333 Sum_probs=31.7
Q ss_pred CCCCCCCCCCcccccccHHHHHHHHHHHHHhhhcCCCCCCCCeE--EEecccchH-HHHHHHhh
Q 026829 2 DYPGFGLSAGLHGYIPSFDRLVDDVIEHYSNIKEYPEFRTLPSF--LFGQSLGGA-VALKVHLK 62 (232)
Q Consensus 2 D~~G~G~S~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~--lvGhSmGg~-ia~~~a~~ 62 (232)
|-||...|.+.. .-.+......+...+...+. .+.|++ |+|++|+|. +|.-+..+
T Consensus 72 D~~sQa~grreE--llGi~~alAhla~a~a~AR~----~GHpvI~Lv~G~A~SGaFLA~GlqA~ 129 (234)
T PF06833_consen 72 DVPSQAYGRREE--LLGINQALAHLAKAYALARL----AGHPVIGLVYGKAMSGAFLAHGLQAN 129 (234)
T ss_pred eCCccccchHHH--HhhHHHHHHHHHHHHHHHHH----cCCCeEEEEecccccHHHHHHHHHhc
Confidence 556665554322 22455555556666655543 256875 999999754 55555443
No 250
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=57.08 E-value=17 Score=31.15 Aligned_cols=36 Identities=28% Similarity=0.259 Sum_probs=27.1
Q ss_pred CCCCeEEEecccchHHHHHHHhhC-CCceeEEEEcCcccc
Q 026829 40 RTLPSFLFGQSLGGAVALKVHLKQ-PNAWSGAILVAPMCK 78 (232)
Q Consensus 40 ~~~~~~lvGhSmGg~ia~~~a~~~-p~~v~~lil~ap~~~ 78 (232)
....++|-|-|||..=|+.++++. | .++|+.=|...
T Consensus 355 ~~~qLILSGlSMGTfgAlYYga~l~P---~AIiVgKPL~N 391 (511)
T TIGR03712 355 DHDQLILSGLSMGTFGALYYGAKLSP---HAIIVGKPLVN 391 (511)
T ss_pred CHHHeeeccccccchhhhhhcccCCC---ceEEEcCcccc
Confidence 334689999999999999998764 4 46776556544
No 251
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=57.07 E-value=7.8 Score=30.84 Aligned_cols=19 Identities=37% Similarity=0.343 Sum_probs=16.1
Q ss_pred CCeEEEecccchHHHHHHH
Q 026829 42 LPSFLFGQSLGGAVALKVH 60 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a 60 (232)
.|..++|||+|=..|..++
T Consensus 76 ~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred CCcEEeecCHHHHHHHHHh
Confidence 3789999999988888765
No 252
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=56.28 E-value=30 Score=27.50 Aligned_cols=36 Identities=25% Similarity=0.321 Sum_probs=26.2
Q ss_pred CeEEEecccchHHHHHHHh---hCCCceeEEEEcCcccc
Q 026829 43 PSFLFGQSLGGAVALKVHL---KQPNAWSGAILVAPMCK 78 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~---~~p~~v~~lil~ap~~~ 78 (232)
+++|.|-|+|+.-+..... ..-++++|.++++|...
T Consensus 110 kL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 110 KLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred eEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 4899999999876655432 23356999999998653
No 253
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=56.01 E-value=14 Score=29.14 Aligned_cols=22 Identities=23% Similarity=0.208 Sum_probs=18.0
Q ss_pred CCCe-EEEecccchHHHHHHHhh
Q 026829 41 TLPS-FLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 41 ~~~~-~lvGhSmGg~ia~~~a~~ 62 (232)
+.|+ ++.|-|||+.++..+|..
T Consensus 36 gi~~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 36 GIPIDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred CCCccEEEEECHHHHHHHHHHcC
Confidence 3443 699999999999999865
No 254
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=55.06 E-value=9 Score=30.43 Aligned_cols=18 Identities=39% Similarity=0.528 Sum_probs=15.6
Q ss_pred CeEEEecccchHHHHHHH
Q 026829 43 PSFLFGQSLGGAVALKVH 60 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a 60 (232)
|-+++|||+|-..|+.++
T Consensus 83 p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 83 PDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred ccEEEecCHHHHHHHHHh
Confidence 678999999998887765
No 255
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=53.58 E-value=7.1 Score=30.54 Aligned_cols=12 Identities=33% Similarity=0.736 Sum_probs=10.2
Q ss_pred CeEEEecccchH
Q 026829 43 PSFLFGQSLGGA 54 (232)
Q Consensus 43 ~~~lvGhSmGg~ 54 (232)
.++++|||+|..
T Consensus 236 ~I~i~GhSl~~~ 247 (270)
T PF14253_consen 236 EIIIYGHSLGEV 247 (270)
T ss_pred EEEEEeCCCchh
Confidence 588999999964
No 256
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=52.96 E-value=16 Score=31.86 Aligned_cols=33 Identities=27% Similarity=0.324 Sum_probs=23.1
Q ss_pred CeEEEecccchHHHHHHHhh--CCCceeEEEEcCc
Q 026829 43 PSFLFGQSLGGAVALKVHLK--QPNAWSGAILVAP 75 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~--~p~~v~~lil~ap 75 (232)
++.|+|||-||+.+..+... ....++++|..+.
T Consensus 196 ~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG 230 (545)
T KOG1516|consen 196 NVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSG 230 (545)
T ss_pred eEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcc
Confidence 58899999999999887653 1234666665543
No 257
>PRK10279 hypothetical protein; Provisional
Probab=48.63 E-value=21 Score=28.76 Aligned_cols=21 Identities=19% Similarity=0.229 Sum_probs=17.8
Q ss_pred CeEEEecccchHHHHHHHhhC
Q 026829 43 PSFLFGQSLGGAVALKVHLKQ 63 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~ 63 (232)
+-.+.|-|||+.++..+|...
T Consensus 34 ~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 34 IDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred cCEEEEEcHHHHHHHHHHcCC
Confidence 357999999999999998654
No 258
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=48.60 E-value=5.6 Score=33.05 Aligned_cols=17 Identities=41% Similarity=0.481 Sum_probs=14.5
Q ss_pred CeEEEecccchHHHHHH
Q 026829 43 PSFLFGQSLGGAVALKV 59 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~ 59 (232)
.+..+|||+||.++..+
T Consensus 151 kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 151 KISFVGHSLGGLVARYA 167 (405)
T ss_pred eeeeeeeecCCeeeeEE
Confidence 57899999999998654
No 259
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=45.69 E-value=16 Score=27.59 Aligned_cols=22 Identities=23% Similarity=0.415 Sum_probs=18.9
Q ss_pred CeEEEecccchHHHHHHHhhCC
Q 026829 43 PSFLFGQSLGGAVALKVHLKQP 64 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p 64 (232)
+-.+.|-|+|+.+|..++...+
T Consensus 27 ~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 27 PDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred CCEEEEECHHHHHHHHHHcCCc
Confidence 3479999999999999998764
No 260
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=45.33 E-value=46 Score=27.17 Aligned_cols=38 Identities=21% Similarity=0.076 Sum_probs=25.6
Q ss_pred HHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHh
Q 026829 23 VDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHL 61 (232)
Q Consensus 23 ~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~ 61 (232)
.+.+.+++..|...- .++..||++|+|=|+.+|--+|.
T Consensus 104 ~~nI~~AYrFL~~~y-epGD~Iy~FGFSRGAf~aRVlag 141 (423)
T COG3673 104 VQNIREAYRFLIFNY-EPGDEIYAFGFSRGAFSARVLAG 141 (423)
T ss_pred HHHHHHHHHHHHHhc-CCCCeEEEeeccchhHHHHHHHH
Confidence 334445555554421 24667999999999999977764
No 261
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=44.47 E-value=18 Score=26.65 Aligned_cols=21 Identities=24% Similarity=0.176 Sum_probs=17.8
Q ss_pred CeEEEecccchHHHHHHHhhC
Q 026829 43 PSFLFGQSLGGAVALKVHLKQ 63 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~ 63 (232)
+-++.|-|+||.+|..++...
T Consensus 28 ~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 28 KKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred cceEEEECHHHHHHHHHHcCC
Confidence 358999999999999998643
No 262
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=44.13 E-value=34 Score=28.76 Aligned_cols=50 Identities=12% Similarity=0.214 Sum_probs=29.1
Q ss_pred ccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHH
Q 026829 160 LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWL 222 (232)
Q Consensus 160 ~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l 222 (232)
.-+.||+|.+|+-.. +-. ...++.+++.+||+.|+ .+..+. +.+.|++=+
T Consensus 397 ~~v~CiYG~~e~d~~---Cp~----l~~~~~~~v~lpGgHHF--d~dy~~----la~~il~~~ 446 (456)
T COG3946 397 ARVQCIYGQEEKDTA---CPS----LKAKGVDTVKLPGGHHF--DGDYEK----LAKAILQGM 446 (456)
T ss_pred ceeEEEecCcccccc---CCc----chhhcceeEecCCCccc--CccHHH----HHHHHHHHH
Confidence 348899998776321 111 12246788899998776 334444 444454443
No 263
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=42.50 E-value=8.1 Score=13.89 Aligned_cols=6 Identities=83% Similarity=1.298 Sum_probs=2.6
Q ss_pred ecccch
Q 026829 48 GQSLGG 53 (232)
Q Consensus 48 GhSmGg 53 (232)
|+||||
T Consensus 1 gf~l~G 6 (10)
T PF08250_consen 1 GFSLGG 6 (10)
T ss_pred Cccccc
Confidence 344443
No 264
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=42.24 E-value=21 Score=27.95 Aligned_cols=22 Identities=23% Similarity=0.190 Sum_probs=18.7
Q ss_pred eEEEecccchHHHHHHHhhCCC
Q 026829 44 SFLFGQSLGGAVALKVHLKQPN 65 (232)
Q Consensus 44 ~~lvGhSmGg~ia~~~a~~~p~ 65 (232)
-.++|-|.||.+|..++...+.
T Consensus 29 d~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 29 DLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred CEEEEECHHHHhHHHHHhCCcc
Confidence 3799999999999999876554
No 265
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=42.14 E-value=17 Score=31.78 Aligned_cols=19 Identities=32% Similarity=0.335 Sum_probs=16.1
Q ss_pred CeEEEecccchHHHHHHHh
Q 026829 43 PSFLFGQSLGGAVALKVHL 61 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~ 61 (232)
|-+++|||||=..|+..|-
T Consensus 266 Pdav~GHSlGE~aAa~aAG 284 (538)
T TIGR02816 266 PDFALGYSKGEASMWASLG 284 (538)
T ss_pred CCEEeecCHHHHHHHHHhC
Confidence 7799999999888887763
No 266
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=42.10 E-value=83 Score=20.68 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=24.2
Q ss_pred CCCCCeEEEecccch--HHHHHHHhhCCCceeEEEE
Q 026829 39 FRTLPSFLFGQSLGG--AVALKVHLKQPNAWSGAIL 72 (232)
Q Consensus 39 ~~~~~~~lvGhSmGg--~ia~~~a~~~p~~v~~lil 72 (232)
+++.+.++||-|=-. -+-..+|.++|++|.++.+
T Consensus 62 fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 62 FPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred CCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 567788999988653 3344467789999887753
No 267
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=41.76 E-value=17 Score=29.68 Aligned_cols=17 Identities=35% Similarity=0.307 Sum_probs=14.0
Q ss_pred eEEEecccchHHHHHHH
Q 026829 44 SFLFGQSLGGAVALKVH 60 (232)
Q Consensus 44 ~~lvGhSmGg~ia~~~a 60 (232)
-+++|||+|=..|+.++
T Consensus 126 ~~~~GHSlGE~aA~~~A 142 (343)
T PLN02752 126 DVCAGLSLGEYTALVFA 142 (343)
T ss_pred CeeeeccHHHHHHHHHh
Confidence 46899999988887765
No 268
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=40.95 E-value=6.7 Score=33.59 Aligned_cols=30 Identities=27% Similarity=0.400 Sum_probs=25.2
Q ss_pred CCeEEEecccchHHHHHHHhhCCCceeEEE
Q 026829 42 LPSFLFGQSLGGAVALKVHLKQPNAWSGAI 71 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~~~p~~v~~li 71 (232)
.|-+|-|-|+||.||..++.+..+.++++.
T Consensus 202 lP~IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 202 LPNIISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred cchhhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 378999999999999999988777666654
No 269
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=40.74 E-value=59 Score=25.77 Aligned_cols=22 Identities=27% Similarity=0.190 Sum_probs=18.5
Q ss_pred CCCCeEEEecccchHHHHHHHh
Q 026829 40 RTLPSFLFGQSLGGAVALKVHL 61 (232)
Q Consensus 40 ~~~~~~lvGhSmGg~ia~~~a~ 61 (232)
++..++|+|.|=|+.+|-.++-
T Consensus 90 ~gd~I~lfGFSRGA~~AR~~a~ 111 (277)
T PF09994_consen 90 PGDRIYLFGFSRGAYTARAFAN 111 (277)
T ss_pred CcceEEEEecCccHHHHHHHHH
Confidence 3456899999999999988874
No 270
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=40.55 E-value=52 Score=27.80 Aligned_cols=64 Identities=13% Similarity=0.199 Sum_probs=33.5
Q ss_pred CccEEEEeeCCCCccChhHHHHHHHHhcCCC--ccEEEcCCCccccccC-CChhHHHHHHHHHHHHHHhh
Q 026829 159 SLPLLILHGENDTVTDPSVSKALYEKASSKD--KKCILYKDAFHSLLEG-EPDDMIIRVFADIISWLDDH 225 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~H~~~~e-~~~~~~~~~~~~i~~~l~~~ 225 (232)
..||+|+.|.-|.+-+ +....+.+.+...+ .=.+-+||.|+..... .++. +.+.+.+++||.+.
T Consensus 189 p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~--~~l~~aVLd~L~~~ 255 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDS--SRLHQAVLDYLASR 255 (411)
T ss_dssp -EEEEEEE--TTS-GG-GGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-C--CHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCcchhHH-HHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCH--HHHHHHHHHHHhcC
Confidence 5799999999999873 33322222221122 2344578999875321 2332 35788999999753
No 271
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=40.50 E-value=24 Score=25.56 Aligned_cols=22 Identities=23% Similarity=0.220 Sum_probs=18.5
Q ss_pred CeEEEecccchHHHHHHHhhCC
Q 026829 43 PSFLFGQSLGGAVALKVHLKQP 64 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p 64 (232)
+-.+.|-|+|+.+|..++...+
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred CCEEEEECHHHHHHHHHHcCCC
Confidence 4579999999999999987543
No 272
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=40.03 E-value=25 Score=29.70 Aligned_cols=28 Identities=21% Similarity=0.247 Sum_probs=22.7
Q ss_pred CeEEEecccchHHHHHHHhhCCCceeEE
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPNAWSGA 70 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~~v~~l 70 (232)
|-++.|-|.|+.+|..++...++.+..+
T Consensus 96 p~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 96 PNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred CCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 6689999999999999998766655444
No 273
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=39.92 E-value=21 Score=28.67 Aligned_cols=17 Identities=29% Similarity=0.548 Sum_probs=15.6
Q ss_pred EEEecccchHHHHHHHh
Q 026829 45 FLFGQSLGGAVALKVHL 61 (232)
Q Consensus 45 ~lvGhSmGg~ia~~~a~ 61 (232)
.+.|-|.||.||+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 59999999999999975
No 274
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=39.65 E-value=71 Score=28.36 Aligned_cols=32 Identities=22% Similarity=0.488 Sum_probs=24.6
Q ss_pred CeEEEec------ccchHHHHHHHhhCCCceeEEEEcCc
Q 026829 43 PSFLFGQ------SLGGAVALKVHLKQPNAWSGAILVAP 75 (232)
Q Consensus 43 ~~~lvGh------SmGg~ia~~~a~~~p~~v~~lil~ap 75 (232)
.++|+|| ++|++|++...+..-.+ .+.+++.|
T Consensus 339 ~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp 376 (655)
T COG3887 339 NVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDP 376 (655)
T ss_pred cEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECc
Confidence 6999999 89999999876655444 56666665
No 275
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=39.38 E-value=23 Score=29.10 Aligned_cols=18 Identities=33% Similarity=0.445 Sum_probs=16.1
Q ss_pred EEEecccchHHHHHHHhh
Q 026829 45 FLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 45 ~lvGhSmGg~ia~~~a~~ 62 (232)
++.|-|+||.||..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 699999999999999853
No 276
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=39.30 E-value=19 Score=29.12 Aligned_cols=19 Identities=42% Similarity=0.604 Sum_probs=15.9
Q ss_pred CCeEEEecccchHHHHHHH
Q 026829 42 LPSFLFGQSLGGAVALKVH 60 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a 60 (232)
.|.++.|||+|=.-|+.++
T Consensus 85 ~p~~~aGHSlGEysAl~~a 103 (310)
T COG0331 85 KPDFVAGHSLGEYSALAAA 103 (310)
T ss_pred CCceeecccHhHHHHHHHc
Confidence 4789999999988887765
No 277
>cd02188 gamma_tubulin Gamma-tubulin is a ubiquitous phylogenetically conserved member of tubulin superfamily. Gamma is a low abundance protein present within the cells in both various types of microtubule-organizing centers and cytoplasmic protein complexes. Gamma-tubulin recruits the alpha/beta-tubulin dimers that form the minus ends of microtubules and is thought to be involved in microtubule nucleation and capping.
Probab=38.26 E-value=1.3e+02 Score=25.75 Aligned_cols=35 Identities=11% Similarity=0.352 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHH
Q 026829 19 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAV 55 (232)
Q Consensus 19 ~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~i 55 (232)
-.++.+.+.+.++...+..+ ...-+++=||+||..
T Consensus 109 g~~~~d~i~d~ir~~~E~cd--~l~gf~i~~SlgGGT 143 (431)
T cd02188 109 GEEVQEEILDIIDREADGSD--SLEGFVLCHSIAGGT 143 (431)
T ss_pred HHHHHHHHHHHHHHHHhcCC--CcceeEEEecCCCCc
Confidence 45666777777776554332 345689999999744
No 278
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=37.37 E-value=1.4e+02 Score=21.19 Aligned_cols=24 Identities=33% Similarity=0.769 Sum_probs=18.1
Q ss_pred HHHHHHHHHhcCcCCccEEEEeeC
Q 026829 145 LKTTEGIERRLEKVSLPLLILHGE 168 (232)
Q Consensus 145 ~~~~~~~~~~l~~i~~PvLii~G~ 168 (232)
+.+..++...+.+.++|.+++.|.
T Consensus 52 ~~sL~~L~~~L~~~g~~L~v~~g~ 75 (165)
T PF00875_consen 52 LESLADLQESLRKLGIPLLVLRGD 75 (165)
T ss_dssp HHHHHHHHHHHHHTTS-EEEEESS
T ss_pred HHHHHHHHHHHHhcCcceEEEecc
Confidence 344557777888899999999998
No 279
>PRK14759 potassium-transporting ATPase subunit F; Provisional
Probab=36.46 E-value=27 Score=17.15 Aligned_cols=8 Identities=25% Similarity=0.588 Sum_probs=5.1
Q ss_pred HhhCCCce
Q 026829 60 HLKQPNAW 67 (232)
Q Consensus 60 a~~~p~~v 67 (232)
|+-+||++
T Consensus 22 ALlrPErF 29 (29)
T PRK14759 22 ALLRPERF 29 (29)
T ss_pred HHhCcccC
Confidence 55677764
No 280
>cd00286 Tubulin_FtsZ Tubulin/FtsZ: Family includes tubulin alpha-, beta-, gamma-, delta-, and epsilon-tubulins as well as FtsZ, all of which are involved in polymer formation. Tubulin is the major component of microtubules, but also exists as a heterodimer and as a curved oligomer. Microtubules exist in all eukaryotic cells and are responsible for many functions, including cellular transport, cell motility, and mitosis. FtsZ forms a ring-shaped septum at the site of bacterial cell division, which is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ can polymerize into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria, archaea, and chloroplasts.
Probab=36.18 E-value=1.7e+02 Score=23.69 Aligned_cols=31 Identities=23% Similarity=0.465 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCeEEEecccch
Q 026829 21 RLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGG 53 (232)
Q Consensus 21 ~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg 53 (232)
++.+++.+.++...+..+ ....+++=|||||
T Consensus 70 ~~~e~i~~~ir~~~E~cD--~~~gf~i~~slgG 100 (328)
T cd00286 70 EYQEEILDIIRKEAEECD--SLQGFFITHSLGG 100 (328)
T ss_pred HHHHHHHHHHHHHHHhCC--CccceEEEeecCC
Confidence 355666666665544332 3457899999987
No 281
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=35.47 E-value=46 Score=28.73 Aligned_cols=54 Identities=19% Similarity=0.108 Sum_probs=29.4
Q ss_pred CccEEEEeeCCCCccChhHHHHHHHHhcC----CCccEEEcCCCccccccCCChhHHH
Q 026829 159 SLPLLILHGENDTVTDPSVSKALYEKASS----KDKKCILYKDAFHSLLEGEPDDMII 212 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~H~~~~e~~~~~~~ 212 (232)
+.+++..+|-.|..+++-....-.+.... .+-.+..+=.+|||+..++|+..++
T Consensus 425 ~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~aGHMvp~d~P~~~~~ 482 (498)
T COG2939 425 KLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYEAGHMVPYDRPESSLE 482 (498)
T ss_pred cceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEecCcceeecCChHHHHH
Confidence 45556666666666654433222232221 1223344445789999999987554
No 282
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=35.31 E-value=20 Score=30.41 Aligned_cols=25 Identities=24% Similarity=0.310 Sum_probs=21.0
Q ss_pred CeEEEecccchHHHHHHHhhCCCce
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPNAW 67 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~~v 67 (232)
|-+|.|-|+|+.+|..++...++.+
T Consensus 102 p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 102 PRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred CCEEEEECHHHHHHHHHHcCCHHHH
Confidence 5689999999999999988766553
No 283
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=34.92 E-value=32 Score=24.93 Aligned_cols=22 Identities=18% Similarity=0.190 Sum_probs=18.2
Q ss_pred CeEEEecccchHHHHHHHhhCC
Q 026829 43 PSFLFGQSLGGAVALKVHLKQP 64 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p 64 (232)
+-.+.|-|.|+.+|..++...+
T Consensus 29 ~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 29 IDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred eeEEEEeCHHHHHHHHHHcCCC
Confidence 3479999999999999887543
No 284
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=34.12 E-value=33 Score=26.13 Aligned_cols=21 Identities=29% Similarity=0.202 Sum_probs=17.7
Q ss_pred CeEEEecccchHHHHHHHhhC
Q 026829 43 PSFLFGQSLGGAVALKVHLKQ 63 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~ 63 (232)
+-.+.|-|+|+.+|..+|...
T Consensus 29 ~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 29 PSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred ceEEEEeCHHHHHHHHHHcCC
Confidence 347999999999999998643
No 285
>cd02189 delta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. Delta-tubulin plays an essential role in forming the triplet microtubules of centrioles and basal bodies.
Probab=33.58 E-value=1.1e+02 Score=26.21 Aligned_cols=34 Identities=21% Similarity=0.371 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHH
Q 026829 20 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAV 55 (232)
Q Consensus 20 ~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~i 55 (232)
.++.+++.+.++...+..+ ...-+++=||+||..
T Consensus 106 ~~~~~~~~d~ir~~~E~cd--~~~gf~~~~sl~GGt 139 (446)
T cd02189 106 PQIKEDILDLIRKEVEKCD--SFEGFLVLHSLAGGT 139 (446)
T ss_pred hhhHHHHHHHHHHHHHhCC--CccceEEEecCCCCc
Confidence 4566677777766655433 345688999999754
No 286
>COG4099 Predicted peptidase [General function prediction only]
Probab=33.54 E-value=21 Score=28.69 Aligned_cols=27 Identities=33% Similarity=0.612 Sum_probs=23.0
Q ss_pred CccEEEEeeCCCCccChhHHHHHHHHh
Q 026829 159 SLPLLILHGENDTVTDPSVSKALYEKA 185 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~~~~~~~~~ 185 (232)
+.|+-++|+.+|+++|.+.++-.+++.
T Consensus 315 ~~piWvfhs~dDkv~Pv~nSrv~y~~l 341 (387)
T COG4099 315 KAPIWVFHSSDDKVIPVSNSRVLYERL 341 (387)
T ss_pred cCceEEEEecCCCccccCcceeehHHH
Confidence 699999999999999988876666554
No 287
>PRK03482 phosphoglycerate mutase; Provisional
Probab=33.46 E-value=1.7e+02 Score=21.96 Aligned_cols=39 Identities=21% Similarity=0.176 Sum_probs=24.8
Q ss_pred ccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHH
Q 026829 17 PSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKV 59 (232)
Q Consensus 17 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~ 59 (232)
+++.++.+.+..+++.+... ..+..+.||+| ||.|...+
T Consensus 120 Es~~~~~~Rv~~~l~~~~~~--~~~~~vliVsH--g~~i~~l~ 158 (215)
T PRK03482 120 ESMQELSDRMHAALESCLEL--PQGSRPLLVSH--GIALGCLV 158 (215)
T ss_pred ccHHHHHHHHHHHHHHHHHh--CCCCeEEEEeC--cHHHHHHH
Confidence 47888888777777765432 12335789999 45554443
No 288
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=33.36 E-value=69 Score=24.91 Aligned_cols=20 Identities=25% Similarity=0.220 Sum_probs=17.3
Q ss_pred EEEecccchHHHHHHHhhCC
Q 026829 45 FLFGQSLGGAVALKVHLKQP 64 (232)
Q Consensus 45 ~lvGhSmGg~ia~~~a~~~p 64 (232)
.+.|-|+|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999987644
No 289
>PLN00222 tubulin gamma chain; Provisional
Probab=32.80 E-value=1.3e+02 Score=25.88 Aligned_cols=55 Identities=13% Similarity=0.256 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHH--------HHHHhhCCCceeEEEEcCc
Q 026829 19 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVA--------LKVHLKQPNAWSGAILVAP 75 (232)
Q Consensus 19 ~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia--------~~~a~~~p~~v~~lil~ap 75 (232)
-.++.+.+.+.++...+..+ ...-+++=||+||..+ -.+..++|..+.--+.+-|
T Consensus 111 g~~~~d~i~d~ir~~~E~cd--~l~gf~i~~sl~GGTGSGlgs~lle~L~d~y~~~~~~~~~v~P 173 (454)
T PLN00222 111 GEQVEEDIMDMIDREADGSD--SLEGFVLCHSIAGGTGSGMGSYLLEALNDRYSKKLVQTYSVFP 173 (454)
T ss_pred HHHHHHHHHHHHHHHHHhCC--CccceEEeecCCCCccchHHHHHHHHHHhhcCCcceeeEEecC
Confidence 45666777777766544322 3456888999997532 2233456765443333344
No 290
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=32.70 E-value=35 Score=27.16 Aligned_cols=18 Identities=33% Similarity=0.508 Sum_probs=16.3
Q ss_pred EEEecccchHHHHHHHhh
Q 026829 45 FLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 45 ~lvGhSmGg~ia~~~a~~ 62 (232)
++.|-|.||.+|..++..
T Consensus 37 ~i~GTSaGaiia~~la~g 54 (288)
T cd07213 37 LFAGTSAGSLIALGLALG 54 (288)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 699999999999999864
No 291
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=32.35 E-value=25 Score=29.48 Aligned_cols=27 Identities=19% Similarity=0.302 Sum_probs=21.7
Q ss_pred CeEEEecccchHHHHHHHhhCCCceeE
Q 026829 43 PSFLFGQSLGGAVALKVHLKQPNAWSG 69 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~p~~v~~ 69 (232)
|-+|.|-|+|+.||..+|...++.+..
T Consensus 112 p~~i~GtS~Gaivaa~~a~~~~~e~~~ 138 (391)
T cd07229 112 PRIITGTATGALIAALVGVHTDEELLR 138 (391)
T ss_pred CceEEEecHHHHHHHHHHcCCHHHHHH
Confidence 668999999999999999865554443
No 292
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=31.92 E-value=1.6e+02 Score=23.33 Aligned_cols=63 Identities=13% Similarity=0.200 Sum_probs=45.0
Q ss_pred CccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhhh
Q 026829 159 SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDHS 226 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~~ 226 (232)
+.|++++=+.=-.+. ..+.+.+++ |+.+++.+-+..+++.-+.+++.+.+...++++||.++.
T Consensus 5 ~~~IgvFDSGVGGLs---Vlrei~~~L--P~e~~iY~~D~a~~PYG~ks~e~I~~~~~~i~~~l~~~~ 67 (269)
T COG0796 5 QPPIGVFDSGVGGLS---VLREIRRQL--PDEDIIYVGDTARFPYGEKSEEEIRERTLEIVDFLLERG 67 (269)
T ss_pred CCeEEEEECCCCcHH---HHHHHHHHC--CCCcEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 456666655444432 334444444 578888888888999999998888788888899987664
No 293
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=31.90 E-value=38 Score=24.29 Aligned_cols=20 Identities=25% Similarity=0.187 Sum_probs=16.7
Q ss_pred CeEEEecccchHHHHHHHhh
Q 026829 43 PSFLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~ 62 (232)
.-.+.|-|.||.+|+.++..
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALG 47 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC
T ss_pred ccEEEEcChhhhhHHHHHhC
Confidence 34799999999999888765
No 294
>KOG2308 consensus Phosphatidic acid-preferring phospholipase A1, contains DDHD domain [Lipid transport and metabolism; Intracellular trafficking, secretion, and vesicular transport]
Probab=31.64 E-value=36 Score=30.87 Aligned_cols=20 Identities=20% Similarity=0.270 Sum_probs=16.9
Q ss_pred CCeEEEecccchHHHHHHHh
Q 026829 42 LPSFLFGQSLGGAVALKVHL 61 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~ 61 (232)
+.+.|+|||+|..|..-...
T Consensus 417 G~Vsi~gHSLGSvit~Dil~ 436 (741)
T KOG2308|consen 417 GKVSIAGHSLGSVITYDILS 436 (741)
T ss_pred CceeeccCCCCceEEEeecc
Confidence 56899999999999877654
No 295
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=31.59 E-value=81 Score=24.22 Aligned_cols=21 Identities=24% Similarity=0.080 Sum_probs=17.9
Q ss_pred eEEEecccchHHHHHHHhhCC
Q 026829 44 SFLFGQSLGGAVALKVHLKQP 64 (232)
Q Consensus 44 ~~lvGhSmGg~ia~~~a~~~p 64 (232)
-.+.|-|+|+.+|..++...+
T Consensus 31 ~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 31 TPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred CEEEEEcHHHHHHHHHHcCCC
Confidence 379999999999999987543
No 296
>PF07578 LAB_N: Lipid A Biosynthesis N-terminal domain; InterPro: IPR011499 This domain is found at the N terminus of a group of Chlamydial lipid A biosynthesis proteins. It is also found by itself in a family of proteins of unknown function.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=31.40 E-value=11 Score=23.13 Aligned_cols=17 Identities=35% Similarity=0.671 Sum_probs=14.6
Q ss_pred CCeEEEecccchHHHHH
Q 026829 42 LPSFLFGQSLGGAVALK 58 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~ 58 (232)
.|++++||++|..+.++
T Consensus 52 DpV~ilgq~~gl~iy~R 68 (72)
T PF07578_consen 52 DPVFILGQSFGLFIYIR 68 (72)
T ss_pred ChHHHHHHhcChHHHHH
Confidence 48999999999998765
No 297
>PHA02595 tk.4 hypothetical protein; Provisional
Probab=31.38 E-value=33 Score=24.53 Aligned_cols=17 Identities=18% Similarity=0.389 Sum_probs=15.3
Q ss_pred cccchHHHHHHHhhCCC
Q 026829 49 QSLGGAVALKVHLKQPN 65 (232)
Q Consensus 49 hSmGg~ia~~~a~~~p~ 65 (232)
.+||+.||..+..++|+
T Consensus 29 g~mG~GIA~~~k~~~P~ 45 (154)
T PHA02595 29 HTMGSGIAGQLAKAFPQ 45 (154)
T ss_pred CcCChHHHHHHHHHcCh
Confidence 38999999999999986
No 298
>PF13124 DUF3963: Protein of unknown function (DUF3963)
Probab=30.97 E-value=76 Score=16.38 Aligned_cols=16 Identities=38% Similarity=0.806 Sum_probs=12.9
Q ss_pred hHHHHHHHHHHHHHHh
Q 026829 209 DMIIRVFADIISWLDD 224 (232)
Q Consensus 209 ~~~~~~~~~i~~~l~~ 224 (232)
.++++.+.+|..|+.+
T Consensus 7 ~fieryfddiqkwirn 22 (40)
T PF13124_consen 7 AFIERYFDDIQKWIRN 22 (40)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4677889999999865
No 299
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=30.26 E-value=43 Score=24.16 Aligned_cols=20 Identities=20% Similarity=0.139 Sum_probs=17.2
Q ss_pred CeEEEecccchHHHHHHHhh
Q 026829 43 PSFLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~ 62 (232)
+-.+.|-|.|+.+|..++..
T Consensus 29 ~d~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 29 IDIVSGTSAGAIVGALYAAG 48 (175)
T ss_pred eeEEEEECHHHHHHHHHHcC
Confidence 34799999999999998854
No 300
>PLN00220 tubulin beta chain; Provisional
Probab=29.28 E-value=2.3e+02 Score=24.34 Aligned_cols=54 Identities=26% Similarity=0.362 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHH--------HHHHhhCCCceeEEEEcCc
Q 026829 20 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVA--------LKVHLKQPNAWSGAILVAP 75 (232)
Q Consensus 20 ~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia--------~~~a~~~p~~v~~lil~ap 75 (232)
..+.+.+.+.++...+..+ ...-+++=|||||..+ -.+.-++|..+.--+.+-|
T Consensus 110 ~~~~~~~~d~ir~~~E~cd--~l~gf~~~~sl~GGTGSG~gs~l~~~l~~~y~~~~~~~~~v~P 171 (447)
T PLN00220 110 AELIDSVLDVVRKEAENCD--CLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFP 171 (447)
T ss_pred HHHHHHHHHHHHHHHHhCc--CcCceEEEEecCCCccccHHHHHHHHHHHhccccceeeeEEEC
Confidence 4556666666666655433 3456888999986442 2234457765433333344
No 301
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=29.06 E-value=26 Score=28.47 Aligned_cols=21 Identities=24% Similarity=0.466 Sum_probs=17.6
Q ss_pred CeEEEecccchHHHHHHHhhC
Q 026829 43 PSFLFGQSLGGAVALKVHLKQ 63 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~ 63 (232)
|-++.|-|.|+.+|..++...
T Consensus 97 p~~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 97 PRVIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred CCEEEEECHHHHHHHHHHcCC
Confidence 568999999999999887643
No 302
>PRK10673 acyl-CoA esterase; Provisional
Probab=28.83 E-value=2.4e+02 Score=21.22 Aligned_cols=63 Identities=19% Similarity=0.233 Sum_probs=34.6
Q ss_pred CccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhh
Q 026829 159 SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 225 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~ 225 (232)
..|++++||-.+..... ..+...+. ++..++.++--||--....+....+...+++..+++..
T Consensus 16 ~~~iv~lhG~~~~~~~~---~~~~~~l~-~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l 78 (255)
T PRK10673 16 NSPIVLVHGLFGSLDNL---GVLARDLV-NDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDAL 78 (255)
T ss_pred CCCEEEECCCCCchhHH---HHHHHHHh-hCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHc
Confidence 57899999977664322 22333332 35677777776664322112222344566676776643
No 303
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=28.78 E-value=2.2e+02 Score=20.44 Aligned_cols=47 Identities=13% Similarity=0.062 Sum_probs=24.9
Q ss_pred HHHHHHHhhhcCCCCCCCCeEEEecccchHHHHHHHhhCCCceeEEEEcCc
Q 026829 25 DVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALKVHLKQPNAWSGAILVAP 75 (232)
Q Consensus 25 d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ap 75 (232)
++.+.+..++.. +..++++|=|..|.+-+.++--.++.+..++=.+|
T Consensus 56 ~l~~~L~~~~~~----gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 56 ELREFLEKLKAE----GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHT----T--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHc----CCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 344444444432 44689999999999998887666777777765555
No 304
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.40 E-value=36 Score=27.40 Aligned_cols=16 Identities=31% Similarity=0.551 Sum_probs=14.8
Q ss_pred EEEecccchHHHHHHH
Q 026829 45 FLFGQSLGGAVALKVH 60 (232)
Q Consensus 45 ~lvGhSmGg~ia~~~a 60 (232)
.+.|-|.||.||+.++
T Consensus 45 li~GTStGgiiA~~l~ 60 (309)
T cd07216 45 LIGGTSTGGLIAIMLG 60 (309)
T ss_pred eeeeccHHHHHHHHhc
Confidence 6999999999999886
No 305
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=28.23 E-value=39 Score=27.18 Aligned_cols=21 Identities=29% Similarity=0.379 Sum_probs=17.8
Q ss_pred CeEEEecccchHHHHHHHhhC
Q 026829 43 PSFLFGQSLGGAVALKVHLKQ 63 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~~ 63 (232)
|-++.|-|.|+.+|..++...
T Consensus 98 ~~~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 98 PRVISGSSAGAIVAALLGTHT 118 (298)
T ss_pred CCEEEEEcHHHHHHHHHHcCC
Confidence 568999999999999988654
No 306
>cd02190 epsilon_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The epsilon-tubulins which are widespread but not ubiquitous among eukaryotes play a role in basal body/centriole morphogenesis.
Probab=28.21 E-value=2.3e+02 Score=23.73 Aligned_cols=34 Identities=29% Similarity=0.533 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHH
Q 026829 20 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAV 55 (232)
Q Consensus 20 ~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~i 55 (232)
.++.+++.+.++...+..+ ...-+++=|||||..
T Consensus 79 ~~~~~~~~d~ir~~~E~cd--~l~gf~i~~sl~GGT 112 (379)
T cd02190 79 HQYIDSILEKIRKAAEKCD--SLQSFFILHSLGGGT 112 (379)
T ss_pred hhHHHHHHHHHHHHHhhCc--CcceEEEEeecCCCc
Confidence 4555666666665544333 334588899999744
No 307
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=27.62 E-value=50 Score=26.55 Aligned_cols=20 Identities=25% Similarity=0.180 Sum_probs=17.6
Q ss_pred CeEEEecccchHHHHHHHhh
Q 026829 43 PSFLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a~~ 62 (232)
+-.|.|-|||+.++..+|..
T Consensus 40 ~~~iaGtS~GAiva~l~A~g 59 (306)
T COG1752 40 IDVIAGTSAGAIVAALYAAG 59 (306)
T ss_pred ccEEEecCHHHHHHHHHHcC
Confidence 45799999999999999874
No 308
>COG3621 Patatin [General function prediction only]
Probab=27.16 E-value=43 Score=27.35 Aligned_cols=20 Identities=35% Similarity=0.609 Sum_probs=16.8
Q ss_pred EEEecccchHHHHHHHhhCC
Q 026829 45 FLFGQSLGGAVALKVHLKQP 64 (232)
Q Consensus 45 ~lvGhSmGg~ia~~~a~~~p 64 (232)
++-|.|.||.+++.+|+..+
T Consensus 45 l~~GTSiGgilal~La~~ks 64 (394)
T COG3621 45 LIGGTSIGGILALGLALGKS 64 (394)
T ss_pred eecCccHHHHHHHHHhcCCC
Confidence 48899999999999986543
No 309
>TIGR00065 ftsZ cell division protein FtsZ. This family consists of cell division protein FtsZ, a GTPase found in bacteria, the chloroplast of plants, and in archaebacteria. Structurally similar to tubulin, FtsZ undergoes GTP-dependent polymerization into filaments that form a cytoskeleton involved in septum synthesis.
Probab=26.87 E-value=2.2e+02 Score=23.53 Aligned_cols=13 Identities=15% Similarity=0.427 Sum_probs=10.1
Q ss_pred CeEEEecccchHH
Q 026829 43 PSFLFGQSLGGAV 55 (232)
Q Consensus 43 ~~~lvGhSmGg~i 55 (232)
..+++-|||||..
T Consensus 103 D~vfI~aglGGGT 115 (349)
T TIGR00065 103 DMVFITAGMGGGT 115 (349)
T ss_pred CEEEEEEeccCcc
Confidence 4678889999754
No 310
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=26.59 E-value=55 Score=25.35 Aligned_cols=20 Identities=30% Similarity=0.197 Sum_probs=17.6
Q ss_pred EEEecccchHHHHHHHhhCC
Q 026829 45 FLFGQSLGGAVALKVHLKQP 64 (232)
Q Consensus 45 ~lvGhSmGg~ia~~~a~~~p 64 (232)
.++|-|+|+.+|..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999987543
No 311
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=26.31 E-value=45 Score=24.91 Aligned_cols=48 Identities=21% Similarity=0.270 Sum_probs=29.5
Q ss_pred hcCcCCccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCcccccc
Q 026829 154 RLEKVSLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE 204 (232)
Q Consensus 154 ~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~ 204 (232)
....+++|+....-..|+ .+......++....+.++++++.+|+.+..
T Consensus 51 ~a~~l~vp~~~~~~~~~~---~~~~~~~l~~~~~~~~D~vlIDT~Gr~~~d 98 (196)
T PF00448_consen 51 YAEILGVPFYVARTESDP---AEIAREALEKFRKKGYDLVLIDTAGRSPRD 98 (196)
T ss_dssp HHHHHTEEEEESSTTSCH---HHHHHHHHHHHHHTTSSEEEEEE-SSSSTH
T ss_pred HHHHhccccchhhcchhh---HHHHHHHHHHHhhcCCCEEEEecCCcchhh
Confidence 344567998886655555 333333344333346789999999988764
No 312
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=26.27 E-value=38 Score=28.59 Aligned_cols=70 Identities=17% Similarity=0.254 Sum_probs=48.5
Q ss_pred HHHHHHhcCcCCccEEEEeeCCCCccChhHHHHHHHHh-cCCCccEEEcCCCccccccC-CChhHHHHHHHHHHHHH
Q 026829 148 TEGIERRLEKVSLPLLILHGENDTVTDPSVSKALYEKA-SSKDKKCILYKDAFHSLLEG-EPDDMIIRVFADIISWL 222 (232)
Q Consensus 148 ~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~H~~~~e-~~~~~~~~~~~~i~~~l 222 (232)
+.++...+.+-.--+|+|.|++|+..... +..- ...+..+.+.||+.|-.... -|+.....+...|.+|-
T Consensus 340 m~dI~~Wvr~~~~rmlFVYG~nDPW~A~~-----f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 340 MRDIDRWVRNNGPRMLFVYGENDPWSAEP-----FRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred HHHHHHHHHhCCCeEEEEeCCCCCcccCc-----cccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 34566666777778999999999987321 1111 22467788889999987642 35556677888888895
No 313
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=25.93 E-value=46 Score=25.90 Aligned_cols=18 Identities=39% Similarity=0.643 Sum_probs=16.3
Q ss_pred EEEecccchHHHHHHHhh
Q 026829 45 FLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 45 ~lvGhSmGg~ia~~~a~~ 62 (232)
.+.|-|.||.||+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 699999999999999865
No 314
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=25.65 E-value=1.8e+02 Score=18.21 Aligned_cols=39 Identities=15% Similarity=0.157 Sum_probs=21.4
Q ss_pred HHHHHHhhhcCCCCCCC-CeEEEecccchHHHHHHHhhCC
Q 026829 26 VIEHYSNIKEYPEFRTL-PSFLFGQSLGGAVALKVHLKQP 64 (232)
Q Consensus 26 ~~~~~~~l~~~~~~~~~-~~~lvGhSmGg~ia~~~a~~~p 64 (232)
+.+.+++++......+- .+-++|-|-|=.+|.+.++.+.
T Consensus 23 V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 23 VENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHhc
Confidence 33344444443333332 3669999999888877776553
No 315
>PTZ00335 tubulin alpha chain; Provisional
Probab=25.42 E-value=2.8e+02 Score=23.85 Aligned_cols=55 Identities=15% Similarity=0.239 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHHHH--------HHhhCCCceeEEEEcCcc
Q 026829 20 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVALK--------VHLKQPNAWSGAILVAPM 76 (232)
Q Consensus 20 ~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia~~--------~a~~~p~~v~~lil~ap~ 76 (232)
.++.+++.+.++...+..+ ...-+++=||+||..+.. +..++|....--+.+-|.
T Consensus 112 ~~~~d~i~d~ir~~~E~cD--~l~gf~i~~Sl~GGTGSGlgs~l~e~l~d~yp~~~~~~~~v~P~ 174 (448)
T PTZ00335 112 KEIVDLCLDRIRKLADNCT--GLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPS 174 (448)
T ss_pred hhHhHHHHHHHHHhHHhcc--CccceeEeeccCCCccchHHHHHHHHHHHhccccceeeEEecCC
Confidence 4456666666666555433 334588889999744222 233567654433334453
No 316
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=25.33 E-value=1e+02 Score=25.74 Aligned_cols=21 Identities=29% Similarity=0.782 Sum_probs=17.6
Q ss_pred HhcCcCCccEEEEeeCCCCcc
Q 026829 153 RRLEKVSLPLLILHGENDTVT 173 (232)
Q Consensus 153 ~~l~~i~~PvLii~G~~D~~v 173 (232)
..+...++|+++|+|..|..-
T Consensus 69 ~~l~~~~Ipv~~I~GNHD~~~ 89 (390)
T COG0420 69 RRLKDAGIPVVVIAGNHDSPS 89 (390)
T ss_pred HHhccCCCcEEEecCCCCchh
Confidence 445668899999999999865
No 317
>KOG2088 consensus Predicted lipase/calmodulin-binding heat-shock protein [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=24.68 E-value=56 Score=29.16 Aligned_cols=21 Identities=29% Similarity=0.249 Sum_probs=18.1
Q ss_pred CCCCeEEEecccchHHHHHHH
Q 026829 40 RTLPSFLFGQSLGGAVALKVH 60 (232)
Q Consensus 40 ~~~~~~lvGhSmGg~ia~~~a 60 (232)
++.+..+.|||.||.++...+
T Consensus 250 p~~~~~~~ghslg~~~~~l~~ 270 (596)
T KOG2088|consen 250 PSYKLTGVGHSLGGLSASLLA 270 (596)
T ss_pred CCCceeEEecccccchhhhhh
Confidence 456889999999999998876
No 318
>PF10555 MraY_sig1: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ; InterPro: IPR018480 Phospho-N-acetylmuramoyl-pentapeptide-transferase (2.7.8.13 from EC) (MraY) is a bacterial enzyme responsible for the formation of the first lipid intermediate of the cell wall peptidoglycan synthesis []. It catalyses the formation of undecaprenyl-pyrophosphoryl-N-acetylmuramoyl-pentapeptide from UDP-MurNAc-pentapeptide and undecaprenyl-phosphate. MraY is an integral membrane protein with probably ten transmembrane domains. It belongs to family 4 of glycosyl transferases. Homologues of MraY have been found in archaebacteria Methanobacterium thermoautotrophicum and in Arabidopsis thaliana (Mouse-ear cress). This entry represents two conserved sites found in these proteins. The first site is located at the end of the first cytoplasmic loop and the beginning of the second transmembrane domain. The second site is located in the third cytoplasmic loop.
Probab=24.11 E-value=11 Score=14.70 Aligned_cols=6 Identities=50% Similarity=1.115 Sum_probs=3.4
Q ss_pred ccchHH
Q 026829 50 SLGGAV 55 (232)
Q Consensus 50 SmGg~i 55 (232)
.|||.+
T Consensus 6 TMGGi~ 11 (13)
T PF10555_consen 6 TMGGIV 11 (13)
T ss_pred cceeEE
Confidence 566643
No 319
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=23.87 E-value=59 Score=25.23 Aligned_cols=21 Identities=29% Similarity=0.305 Sum_probs=17.4
Q ss_pred EEEecccchHHHHHHHhhCCCc
Q 026829 45 FLFGQSLGGAVALKVHLKQPNA 66 (232)
Q Consensus 45 ~lvGhSmGg~ia~~~a~~~p~~ 66 (232)
.+.|-|+|+.+|..++. .|++
T Consensus 34 ~i~GtSaGAl~aa~~a~-~~~~ 54 (246)
T cd07222 34 RFAGASAGSLVAAVLLT-APEK 54 (246)
T ss_pred EEEEECHHHHHHHHHhc-ChHH
Confidence 79999999999999983 4543
No 320
>PF02044 Bombesin: Bombesin-like peptide; InterPro: IPR000874 Bombesin-like peptides comprise a large family of peptides which were initially isolated from amphibian skin, where they stimulate smooth muscle contraction. They were later found to be widely distributed in mammalian neural and endocrine cells. The amphibian peptides which belong to this family are currently classified into three subfamilies [, ]; the Bombesin group, which includes bombesin and alytesin; the Ranatensin group, which includes ranatensins, litorin, and Rohdei litorin; and the Phyllolitorin group, which includes Leu(8)- and Phe(8)-phyllolitorins. In mammals and birds two categories of bombesin-like peptides are known [, ], gastrin-releasing peptide (GRP), which stimulates the release of gastrin as well as other gastrointestinal hormones, and neuromedin B (NMB), a neuropeptide whose function is not yet clear. Bombesin-like peptides, like many other active peptides, are synthesized as larger protein precursors that are enzymatically converted to their mature forms. The final peptides are eight to fourteen residues long.; GO: 0007218 neuropeptide signaling pathway; PDB: 1C9A_A 1C98_A.
Probab=23.64 E-value=15 Score=14.52 Aligned_cols=8 Identities=25% Similarity=0.704 Sum_probs=3.7
Q ss_pred EEEecccc
Q 026829 45 FLFGQSLG 52 (232)
Q Consensus 45 ~lvGhSmG 52 (232)
.-+||=||
T Consensus 4 WAvGh~Mg 11 (14)
T PF02044_consen 4 WAVGHFMG 11 (14)
T ss_dssp CHHHCT--
T ss_pred cceeeeec
Confidence 44677776
No 321
>PRK13938 phosphoheptose isomerase; Provisional
Probab=23.57 E-value=1.8e+02 Score=21.74 Aligned_cols=24 Identities=17% Similarity=0.109 Sum_probs=20.3
Q ss_pred CCCeEEEecccchHHHHHHHhhCC
Q 026829 41 TLPSFLFGQSLGGAVALKVHLKQP 64 (232)
Q Consensus 41 ~~~~~lvGhSmGg~ia~~~a~~~p 64 (232)
+..++++|.+=.|.+|..++.+..
T Consensus 45 g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 45 GARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred CCEEEEEeCcHHHHHHHHHHHHcC
Confidence 457999999999999999987653
No 322
>PRK13690 hypothetical protein; Provisional
Probab=23.37 E-value=1.8e+02 Score=21.47 Aligned_cols=32 Identities=13% Similarity=0.264 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCeEEEecc
Q 026829 19 FDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQS 50 (232)
Q Consensus 19 ~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhS 50 (232)
++++-+++...+..+.+...+....++++|-|
T Consensus 3 ~~~i~~~~~~~~~El~~~a~l~~g~i~VvGcS 34 (184)
T PRK13690 3 LEEIKKQTRQILEELLEQANLKPGQIFVLGCS 34 (184)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCEEEEecc
Confidence 34455555555555544334445578999988
No 323
>PRK00865 glutamate racemase; Provisional
Probab=23.31 E-value=2.8e+02 Score=21.70 Aligned_cols=61 Identities=15% Similarity=0.178 Sum_probs=41.6
Q ss_pred ccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCccccccCCChhHHHHHHHHHHHHHHhh
Q 026829 160 LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLDDH 225 (232)
Q Consensus 160 ~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~~~ 225 (232)
.|+.++=+.--.+. ..+.+.+.. |+.+++.+-+..|.|.-+++++.+.....++++||.+.
T Consensus 6 ~~IgvfDSGiGGLt---vl~~i~~~l--p~~~~iY~~D~~~~PYG~ks~~~i~~~~~~~~~~L~~~ 66 (261)
T PRK00865 6 APIGVFDSGVGGLT---VLREIRRLL--PDEHIIYVGDTARFPYGEKSEEEIRERTLEIVEFLLEY 66 (261)
T ss_pred CeEEEEECCccHHH---HHHHHHHHC--CCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 45555544443332 233444433 57788888888999999888888888888888888764
No 324
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=22.89 E-value=61 Score=26.72 Aligned_cols=18 Identities=22% Similarity=0.388 Sum_probs=16.3
Q ss_pred EEEecccchHHHHHHHhh
Q 026829 45 FLFGQSLGGAVALKVHLK 62 (232)
Q Consensus 45 ~lvGhSmGg~ia~~~a~~ 62 (232)
.+.|-|.||.||+.++..
T Consensus 46 liaGTStGgiiA~~la~~ 63 (349)
T cd07214 46 VIAGTSTGGLITAMLTAP 63 (349)
T ss_pred EEeeCCHHHHHHHHHhcC
Confidence 599999999999999864
No 325
>COG2201 CheB Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]
Probab=22.89 E-value=1.2e+02 Score=25.00 Aligned_cols=28 Identities=29% Similarity=0.440 Sum_probs=22.1
Q ss_pred CCeEEEecccchHHHHHHHh-hCCCceeE
Q 026829 42 LPSFLFGQSLGGAVALKVHL-KQPNAWSG 69 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~-~~p~~v~~ 69 (232)
.+++++|-|.||.-|++..+ ..|..+..
T Consensus 157 ~~iV~IGaStGGp~AL~~il~~lP~~~p~ 185 (350)
T COG2201 157 RKIVAIGASTGGPAALRAVLPALPADFPA 185 (350)
T ss_pred ccEEEEEeCCCCHHHHHHHHHhCCCCCCC
Confidence 36789999999999999765 46766653
No 326
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=22.64 E-value=49 Score=26.16 Aligned_cols=31 Identities=23% Similarity=0.110 Sum_probs=25.0
Q ss_pred CCeE-EEecccchHHHHHHHhhCCCceeEEEE
Q 026829 42 LPSF-LFGQSLGGAVALKVHLKQPNAWSGAIL 72 (232)
Q Consensus 42 ~~~~-lvGhSmGg~ia~~~a~~~p~~v~~lil 72 (232)
.|+. ++|-|+|+.-+..+..+.+.+-+++++
T Consensus 39 ~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 39 NPFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred CCcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 3554 999999999999998888887666654
No 327
>cd06149 ISG20 DEDDh 3'-5' exonuclease domain of Interferon Stimulated Gene product of 20 kDa, and similar proteins. Interferon (IFN) Stimulated Gene product of 20 kDa (ISG20) is an IFN-induced antiviral exonuclease with a strong preference for single-stranded RNA and minor activity towards single-stranded DNA. It was also independently identified by its response to estrogen and was called HEM45 (human estrogen regulated transcript). ISG20 is a DEDDh-type DnaQ-like 3'-5' exonuclease containing three conserved sequence motifs termed ExoI, ExoII and ExoIII with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. ISG20 may be a major effector of innate immunity against pathogens including viruses, bacteria, and parasites. It is located in promyelocytic leukemia (PML) nuclear bodies, sites for oncogenic DNA viral transcription and repli
Probab=22.59 E-value=67 Score=22.90 Aligned_cols=24 Identities=8% Similarity=0.320 Sum_probs=14.7
Q ss_pred ccHHHHHHHHHHHHHhhhcCCCCCCCCeEEEeccc
Q 026829 17 PSFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSL 51 (232)
Q Consensus 17 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSm 51 (232)
+++++....+.+++. ..+||||++
T Consensus 62 ~~~~~v~~~l~~~l~-----------~~vlV~Hn~ 85 (157)
T cd06149 62 TPFAVAQKEILKILK-----------GKVVVGHAI 85 (157)
T ss_pred CCHHHHHHHHHHHcC-----------CCEEEEeCc
Confidence 456666555554431 258999994
No 328
>COG0813 DeoD Purine-nucleoside phosphorylase [Nucleotide transport and metabolism]
Probab=22.58 E-value=2e+02 Score=22.18 Aligned_cols=40 Identities=10% Similarity=0.150 Sum_probs=26.4
Q ss_pred CCCCCCeEEEecccc----hHHHHHHHhhCCCceeEEEEcCccccC
Q 026829 38 EFRTLPSFLFGQSLG----GAVALKVHLKQPNAWSGAILVAPMCKI 79 (232)
Q Consensus 38 ~~~~~~~~lvGhSmG----g~ia~~~a~~~p~~v~~lil~ap~~~~ 79 (232)
.+.+.++.|.||.|| +.-+-++... ..|+.+|-+++...+
T Consensus 52 tYKGk~iSvmg~GmGipS~sIY~~ELi~~--y~Vk~iIRvGt~Gal 95 (236)
T COG0813 52 TYKGKKISVMGHGMGIPSISIYSRELITD--YGVKKIIRVGTCGAL 95 (236)
T ss_pred eecCcEEEEEEecCCCccHHHHHHHHHHH--hCcceEEEEEccccc
Confidence 345678999999999 3333334333 358889888775543
No 329
>PTZ00387 epsilon tubulin; Provisional
Probab=22.50 E-value=2.1e+02 Score=24.72 Aligned_cols=35 Identities=31% Similarity=0.514 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHHH
Q 026829 20 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAVA 56 (232)
Q Consensus 20 ~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~ia 56 (232)
..+.+.+.+.++...+..+ ...-+++=|||||..+
T Consensus 111 ~~~~d~~~d~Ir~~~E~cD--~l~gf~i~~slgGGTG 145 (465)
T PTZ00387 111 DKYIDSISESVRRQVEQCD--SLQSFFLMHSLGGGTG 145 (465)
T ss_pred HHHHHHHHHHHHHHHHhcc--CcceEEEEeecCCCcc
Confidence 4555666666655554333 3345788999997553
No 330
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=22.42 E-value=1.8e+02 Score=22.66 Aligned_cols=38 Identities=13% Similarity=0.288 Sum_probs=31.7
Q ss_pred CCccEEEcCCCccccccCCChhHHHHHHHHHHHHHH-hh
Q 026829 188 KDKKCILYKDAFHSLLEGEPDDMIIRVFADIISWLD-DH 225 (232)
Q Consensus 188 ~~~~~~~~~~~~H~~~~e~~~~~~~~~~~~i~~~l~-~~ 225 (232)
|+.+++.+-+..|+|.-+++++.+......+++||. +.
T Consensus 22 p~~~~iy~~D~~~~PYG~ks~~~i~~~~~~~~~~L~~~~ 60 (251)
T TIGR00067 22 PKEHYIYVGDTKRFPYGEKSPEFILEYVLELLTFLKERH 60 (251)
T ss_pred CCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 577889998899999998888877778888888887 54
No 331
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=22.28 E-value=2.1e+02 Score=21.42 Aligned_cols=39 Identities=13% Similarity=0.031 Sum_probs=23.4
Q ss_pred cHHHHHHHHHHHHHhhhcCCCCCCCCeEEEeccc----chHHHHHHHhhC
Q 026829 18 SFDRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSL----GGAVALKVHLKQ 63 (232)
Q Consensus 18 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSm----Gg~ia~~~a~~~ 63 (232)
+.+.+++.+.+.+... +-.++|+|||- |..++-++|.+.
T Consensus 92 ~~e~~a~al~~~i~~~-------~p~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 92 DTLATAKALAAAIKKI-------GVDLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred ChHHHHHHHHHHHHHh-------CCCEEEEcCCcccCCcCcHHHHHHHHh
Confidence 3455555554444321 12478888888 778888877653
No 332
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=22.11 E-value=86 Score=26.55 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=22.3
Q ss_pred ccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCcccc
Q 026829 160 LPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSL 202 (232)
Q Consensus 160 ~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~ 202 (232)
.-|++..|..|+.-... ..+.. ......++|+|++|+.
T Consensus 377 tnviFtNG~~DPW~~lg----v~~~~-~~~~~~~~I~g~~Hc~ 414 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALG----VTSDS-SDSVPAIVIPGGAHCS 414 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-S-SSSEEEEEETT--TTG
T ss_pred CeEEeeCCCCCCccccc----CCCCC-CCCcccEEECCCeeec
Confidence 56999999999986543 12222 2344567899999995
No 333
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=22.05 E-value=70 Score=22.72 Aligned_cols=18 Identities=33% Similarity=0.348 Sum_probs=16.2
Q ss_pred CeEEEecccchHHHHHHH
Q 026829 43 PSFLFGQSLGGAVALKVH 60 (232)
Q Consensus 43 ~~~lvGhSmGg~ia~~~a 60 (232)
.-++.|-|.|+.++..++
T Consensus 29 ~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 29 VTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCEEEEEcHHHHHHHHHh
Confidence 458999999999999998
No 334
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=21.60 E-value=3.6e+02 Score=21.06 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=14.3
Q ss_pred EEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCC
Q 026829 164 ILHGENDTVTDPSVSKALYEKASSKDKKCILYKDA 198 (232)
Q Consensus 164 ii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (232)
+|-|..|+.-....-+.+.+....++.++.++|.+
T Consensus 3 ~iGG~~~~~~~~~i~~~~~~lag~~~~rI~~iptA 37 (250)
T TIGR02069 3 IIGGAEDKVGDREILREFVSRAGGEDAIIVIITSA 37 (250)
T ss_pred EEeCccccCChHHHHHHHHHHhCCCCceEEEEeCC
Confidence 44444444333333333333333233344455544
No 335
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=21.29 E-value=2.1e+02 Score=25.00 Aligned_cols=63 Identities=14% Similarity=0.205 Sum_probs=39.4
Q ss_pred CccEEEEeeCCCCccChhHHHHHHHHhcCCCccEEEcCCCcccccc------CCCh--hHHHHHHHHHHHHHHhhh
Q 026829 159 SLPLLILHGENDTVTDPSVSKALYEKASSKDKKCILYKDAFHSLLE------GEPD--DMIIRVFADIISWLDDHS 226 (232)
Q Consensus 159 ~~PvLii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~------e~~~--~~~~~~~~~i~~~l~~~~ 226 (232)
..-|++..|..|+.-. .-. .. ........++|+|++||.=. |-|. ..+..+.+.+..||....
T Consensus 433 atnVvf~NG~~DPWh~---LG~-~~-st~~~~~~~li~gtsHCaDMyp~~~sD~~~L~~aR~~i~~~l~~wl~~~~ 503 (514)
T KOG2182|consen 433 ATNVVFPNGSLDPWHA---LGL-QN-STDSSVVSILINGTSHCADMYPARDSDSPSLKAARNRIDQNLARWLHQQP 503 (514)
T ss_pred cceEEecCCCCCchhh---hcc-cc-CCCCCceEEEecCCccccccCCCCCCccHHHHHHHHHHHHHHHHHhhhcc
Confidence 5789999999999542 211 11 23356788899999999632 1121 123445666677776544
No 336
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.88 E-value=64 Score=26.26 Aligned_cols=17 Identities=24% Similarity=0.309 Sum_probs=14.8
Q ss_pred EEEecccchHHHHHHHh
Q 026829 45 FLFGQSLGGAVALKVHL 61 (232)
Q Consensus 45 ~lvGhSmGg~ia~~~a~ 61 (232)
.+.|-|.||.||+.++.
T Consensus 43 li~GTStGgiia~~l~~ 59 (329)
T cd07215 43 LVAGTSTGGILTCLYLC 59 (329)
T ss_pred eeeccCHHHHHHHHHhC
Confidence 69999999999988753
No 337
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=20.59 E-value=68 Score=29.47 Aligned_cols=17 Identities=24% Similarity=0.376 Sum_probs=15.4
Q ss_pred EEEecccchHHHHHHHh
Q 026829 45 FLFGQSLGGAVALKVHL 61 (232)
Q Consensus 45 ~lvGhSmGg~ia~~~a~ 61 (232)
+|.|.|+||.++..+|.
T Consensus 69 ~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 69 VISGTSAGGINGVLLAY 85 (739)
T ss_pred eEEeeCHHHHHHHHHHc
Confidence 69999999999988885
No 338
>cd02186 alpha_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino
Probab=20.53 E-value=4.9e+02 Score=22.29 Aligned_cols=34 Identities=24% Similarity=0.456 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHH
Q 026829 20 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAV 55 (232)
Q Consensus 20 ~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~i 55 (232)
.++.+++.+.++...+..+ ...-+++=||+||..
T Consensus 111 ~~~~~~i~d~ir~~~E~cD--~l~gf~i~~sl~GGT 144 (434)
T cd02186 111 KEIIDLVLDRIRKLADNCT--GLQGFLIFHSFGGGT 144 (434)
T ss_pred HHHHHHHHHHHHHHHhcCC--CcceeEEEeccCCCc
Confidence 4566677777666655433 345688889999754
No 339
>PRK14046 malate--CoA ligase subunit beta; Provisional
Probab=20.46 E-value=82 Score=26.47 Aligned_cols=31 Identities=16% Similarity=0.217 Sum_probs=27.6
Q ss_pred CCeEEEecccchHHHHHHHhhCCCceeEEEE
Q 026829 42 LPSFLFGQSLGGAVALKVHLKQPNAWSGAIL 72 (232)
Q Consensus 42 ~~~~lvGhSmGg~ia~~~a~~~p~~v~~lil 72 (232)
.|++++|.+.||+-.=..+.++|+.+.++.+
T Consensus 119 g~~v~~~s~~GGv~iEe~~~~~p~~i~~~~i 149 (392)
T PRK14046 119 ERVRVIASARGGMEIEEIAAKEPEAIIQVVV 149 (392)
T ss_pred CcEEEEEeCCCCCchHHHhhhChhheEEEEc
Confidence 4778999999999999999999999988876
No 340
>cd02187 beta_tubulin The tubulin superfamily includes five distinct families, the alpha-, beta-, gamma-, delta-, and epsilon-tubulins and a sixth family (zeta-tubulin) which is present only in kinetoplastid protozoa. The alpha- and beta-tubulins are the major components of microtubules, while gamma-tubulin plays a major role in the nucleation of microtubule assembly. The delta- and epsilon-tubulins are widespread but unlike the alpha, beta, and gamma-tubulins they are not ubiquitous among eukaryotes. The alpha/beta-tubulin heterodimer is the structural subunit of microtubules. The alpha- and beta-tubulins share 40% amino-acid sequence identity, exist in several isotype forms, and undergo a variety of posttranslational modifications. The structures of alpha- and beta-tubulin are basically identical: each monomer is formed by a core of two beta-sheets surrounded by alpha-helices. The monomer structure is very compact, but can be divided into three regions based on function: the amino-
Probab=20.35 E-value=2.3e+02 Score=24.13 Aligned_cols=34 Identities=29% Similarity=0.472 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHH
Q 026829 20 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAV 55 (232)
Q Consensus 20 ~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~i 55 (232)
..+.+.+.+.++...+..+ ...-+++=||+||..
T Consensus 109 ~~~~e~i~d~ir~~~E~cD--~l~gf~~~~sl~GGT 142 (425)
T cd02187 109 AELIDSVLDVVRKEAESCD--CLQGFQLTHSLGGGT 142 (425)
T ss_pred HHHHHHHHHHHHHhhccCC--CcceEEEEeecCCCc
Confidence 3566667766666554333 345588889988644
No 341
>PLN00221 tubulin alpha chain; Provisional
Probab=20.33 E-value=3.1e+02 Score=23.60 Aligned_cols=34 Identities=21% Similarity=0.399 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCeEEEecccchHH
Q 026829 20 DRLVDDVIEHYSNIKEYPEFRTLPSFLFGQSLGGAV 55 (232)
Q Consensus 20 ~~~~~d~~~~~~~l~~~~~~~~~~~~lvGhSmGg~i 55 (232)
.++.+.+.+.++...+..+ ...-+++=||+||..
T Consensus 112 ~~~~~~i~d~ir~~~E~cD--~l~gf~i~~Sl~GGt 145 (450)
T PLN00221 112 KEIVDLCLDRIRKLADNCT--GLQGFLVFNAVGGGT 145 (450)
T ss_pred HHHHHHHHHHHHHHHHhcc--CccceeEeeccCCCc
Confidence 4566666666766655433 345588889999744
No 342
>PRK02399 hypothetical protein; Provisional
Probab=20.29 E-value=4e+02 Score=22.66 Aligned_cols=30 Identities=20% Similarity=0.112 Sum_probs=26.1
Q ss_pred eEEEecccchHHHHHHHhhCCCceeEEEEc
Q 026829 44 SFLFGQSLGGAVALKVHLKQPNAWSGAILV 73 (232)
Q Consensus 44 ~~lvGhSmGg~ia~~~a~~~p~~v~~lil~ 73 (232)
++-+|=|+|..++..+...-|=-+-|++++
T Consensus 99 viglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 99 VIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred EEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 678999999999999988888878888875
Done!