BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026830
(232 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255576215|ref|XP_002529001.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
gi|223531541|gb|EEF33371.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
Length = 226
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 183/232 (78%), Positives = 200/232 (86%), Gaps = 6/232 (2%)
Query: 1 MQGVVLNPSYSRPHQTLDSPSCSRPASKSTKSFFGERVSLTRWRNPVCHSSCRLLLIRKR 60
MQ VV+NP+YSRPHQTLDS + S + S F RVSL R RN + CR + +
Sbjct: 1 MQAVVINPTYSRPHQTLDS-APSSSRPFKSSSLFSARVSLNRGRNHLRRIPCRSVRL--- 56
Query: 61 GAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQ 120
RR V++AVATP+SA+ELPLTAEN+ESVLDE+RPYLI+DGGNVALHEIDGNVVRLKLQ
Sbjct: 57 --TRRLVVRAVATPNSALELPLTAENVESVLDEVRPYLIADGGNVALHEIDGNVVRLKLQ 114
Query: 121 GACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLV 180
GACGSCPSSVMTMKMGIERRLMEKIPEIVAVE +ADEETGLELNEENIEKVLEEIRPYLV
Sbjct: 115 GACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLV 174
Query: 181 GAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
GAAGGSLELV I+EPI K+RITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL
Sbjct: 175 GAAGGSLELVAIEEPIAKIRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 226
>gi|449435134|ref|XP_004135350.1| PREDICTED: nifU-like protein 2, chloroplastic-like [Cucumis
sativus]
Length = 228
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 180/235 (76%), Positives = 198/235 (84%), Gaps = 11/235 (4%)
Query: 1 MQGVVLNPS---YSRPHQTLDSPSCSRPASKSTKSFFGERVSLTRWRNPVCHSSCRLLLI 57
MQ V+LN + Y+R QTL+SPSCSR + FF R ++ WR SCR L I
Sbjct: 1 MQAVLLNLNTSPYTRSPQTLESPSCSR--NFKVSRFFVLR-HVSPWRK-----SCRSLRI 52
Query: 58 RKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRL 117
R ++R I+AVATP+SA+ELPLT EN+ESVLDE+RPYLI+DGGNVALHEIDGNVVRL
Sbjct: 53 RLPSSSRTRFIRAVATPNSALELPLTVENVESVLDEVRPYLIADGGNVALHEIDGNVVRL 112
Query: 118 KLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRP 177
KLQGACGSCPSSV TMKMGIERRLMEKIPEIVAVE +ADEETGLELNEENIEKVLEEIRP
Sbjct: 113 KLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRP 172
Query: 178 YLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
YLVGAAGGSLELV I+EPIVKVRITGPAAGVMTVRVAVTQKLREKIP+IAAVQLL
Sbjct: 173 YLVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLL 227
>gi|224129660|ref|XP_002328771.1| predicted protein [Populus trichocarpa]
gi|222839069|gb|EEE77420.1| predicted protein [Populus trichocarpa]
Length = 234
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 179/241 (74%), Positives = 194/241 (80%), Gaps = 16/241 (6%)
Query: 1 MQGVVLNPSYSRPHQTLDSPSCSRP----ASKSTKSFFGERVSLTRW--RNPVCHSSCRL 54
MQ VV NP++ QTLD+ SCS P KS K FFG V R CHS
Sbjct: 1 MQSVVWNPTHCSAQQTLDT-SCSSPLPLLHHKSCKGFFGAHVRSANQLRRGTPCHS---- 55
Query: 55 LLIRKR---GAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEID 111
+R R RR V+KAVATPDSA+ELPLTA+N+ESVLDE+RPYLISDGGNVALHEID
Sbjct: 56 --LRARLPSFTQRRLVVKAVATPDSAVELPLTADNVESVLDEVRPYLISDGGNVALHEID 113
Query: 112 GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKV 171
GNVVRLKLQGAC SC +SV TMKMGIERRLMEKIPEIVAVE+++DEETGLEL EENIEKV
Sbjct: 114 GNVVRLKLQGACSSCSASVTTMKMGIERRLMEKIPEIVAVEAISDEETGLELKEENIEKV 173
Query: 172 LEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQL 231
LEEIRPYLVGAAGGSLELV I+EPIVK+RITGPAAGVMTVRVAVTQKLREKIPAIAAVQL
Sbjct: 174 LEEIRPYLVGAAGGSLELVAIEEPIVKIRITGPAAGVMTVRVAVTQKLREKIPAIAAVQL 233
Query: 232 L 232
L
Sbjct: 234 L 234
>gi|225448154|ref|XP_002264418.1| PREDICTED: nifU-like protein 2, chloroplastic [Vitis vinifera]
gi|297739542|emb|CBI29724.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 161/169 (95%), Positives = 165/169 (97%)
Query: 64 RRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGAC 123
R V+KAVATPDSA+ELPLTAEN+ESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGAC
Sbjct: 59 RSRVVKAVATPDSAVELPLTAENVESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGAC 118
Query: 124 GSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAA 183
GSCPSSVMTMKMGIERRLMEKIPEIVAVE +ADEETGLELNEENIEKVLEEIRPYLVGAA
Sbjct: 119 GSCPSSVMTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLEEIRPYLVGAA 178
Query: 184 GGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
GGSLELV IDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL
Sbjct: 179 GGSLELVGIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 227
>gi|449503323|ref|XP_004161945.1| PREDICTED: nifU-like protein 2, chloroplastic-like [Cucumis
sativus]
Length = 216
Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 164/200 (82%), Positives = 177/200 (88%), Gaps = 6/200 (3%)
Query: 33 FFGERVSLTRWRNPVCHSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLD 92
FF R ++ WR SCR L IR ++R I+AVATP+SA+ELPLT EN+ESVLD
Sbjct: 22 FFVLR-HVSPWRK-----SCRSLRIRLPSSSRTRFIRAVATPNSALELPLTVENVESVLD 75
Query: 93 EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
E+RPYLI+DGGNVALHEIDGNVVRLKLQGACGSCPSSV TMKMGIERRLMEKIPEIVAVE
Sbjct: 76 EVRPYLIADGGNVALHEIDGNVVRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVE 135
Query: 153 SVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVR 212
+ADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELV I+EPIVKVRITGPAAGVMTVR
Sbjct: 136 PIADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVGIEEPIVKVRITGPAAGVMTVR 195
Query: 213 VAVTQKLREKIPAIAAVQLL 232
VAVTQKLREKIP+IAAVQLL
Sbjct: 196 VAVTQKLREKIPSIAAVQLL 215
>gi|357445313|ref|XP_003592934.1| NifU-like protein [Medicago truncatula]
gi|355481982|gb|AES63185.1| NifU-like protein [Medicago truncatula]
Length = 224
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/232 (72%), Positives = 181/232 (78%), Gaps = 8/232 (3%)
Query: 1 MQGVVLNPSYSRPHQTLDSPSCSRPASKSTKSFFGERVSLTRWRNPVCHSSCRLLLIRKR 60
MQGVV+ + S L S +R K FFG + N L +
Sbjct: 1 MQGVVVLNTQSYCRTVLQPSSFTR---KVGTMFFGPNLPFRSTSNNHLLPPPSLCFHKPP 57
Query: 61 GAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQ 120
A IKAVA P+ A+ELPLTAEN+E+VLDEIRPYLISDGGNVALHEIDGNVVRLKLQ
Sbjct: 58 FA-----IKAVAIPNPAVELPLTAENVETVLDEIRPYLISDGGNVALHEIDGNVVRLKLQ 112
Query: 121 GACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLV 180
GACGSCPSSVMTMKMGIERRLMEKIPEIVAVE V DEETGLELN+ENIEKVLEE+RPYLV
Sbjct: 113 GACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPVTDEETGLELNDENIEKVLEELRPYLV 172
Query: 181 GAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
GAAGG+LELV I+EPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL
Sbjct: 173 GAAGGTLELVAIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 224
>gi|18423084|ref|NP_568715.1| NifU-like protein 2 [Arabidopsis thaliana]
gi|75163219|sp|Q93W20.1|NIFU2_ARATH RecName: Full=NifU-like protein 2, chloroplastic; Short=AtCNfu2;
Short=AtCnfU-V; Flags: Precursor
gi|13878181|gb|AAK44168.1|AF370353_1 unknown protein [Arabidopsis thaliana]
gi|16226434|gb|AAL16167.1|AF428399_1 AT5g49940/K9P8_8 [Arabidopsis thaliana]
gi|17104539|gb|AAL34158.1| unknown protein [Arabidopsis thaliana]
gi|26452324|dbj|BAC43248.1| unknown protein [Arabidopsis thaliana]
gi|28207818|emb|CAD55559.1| NFU2 protein [Arabidopsis thaliana]
gi|332008490|gb|AED95873.1| NifU-like protein 2 [Arabidopsis thaliana]
Length = 235
Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 162/236 (68%), Positives = 186/236 (78%), Gaps = 5/236 (2%)
Query: 1 MQGVVLNPS-YSR-PHQTLDSPSCSRPASKSTKSFFGERVS--LTRWRNPVCHSSCRLLL 56
MQ + LNP+ SR P Q +D S S + +R + R NP+ R L
Sbjct: 1 MQLLTLNPAAISRTPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLS 60
Query: 57 IRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVR 116
R+ R V+KAVATPD +E+PLT EN+ESVLDEIRPYL+SDGGNVALHEIDGN+VR
Sbjct: 61 SRQL-FRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVR 119
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIR 176
+KLQGACGSCPSS MTMKMGIERRLMEKIPEIVAVE++ DEETGLELNEENIEKVLEEIR
Sbjct: 120 VKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIR 179
Query: 177 PYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
PYL+G A GSL+LV I++PIVK+RITGPAAGVMTVRVAVTQKLREKIP+IAAVQL+
Sbjct: 180 PYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235
>gi|358248207|ref|NP_001239839.1| uncharacterized protein LOC100803112 [Glycine max]
gi|255637868|gb|ACU19253.1| unknown [Glycine max]
Length = 219
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/185 (82%), Positives = 165/185 (89%), Gaps = 3/185 (1%)
Query: 51 SCRLLLIRKR---GAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVAL 107
S R LL+R +R +K V TP+ A+ELPLTAEN+ESVLDEIRPYLI+DGGNVAL
Sbjct: 35 SFRRLLLRPSLGIHLSRSFALKCVVTPNPAVELPLTAENVESVLDEIRPYLIADGGNVAL 94
Query: 108 HEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEEN 167
H+IDGNVVRLKLQGACGSCPSSV TMKMGIERRLMEKIPEIVAVE +ADEETGLELNE+N
Sbjct: 95 HQIDGNVVRLKLQGACGSCPSSVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEDN 154
Query: 168 IEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIA 227
IEKVLEE+RPYLVGAA G+LELV IDEPIVKVRITGPAA V+TVRVAVTQKLREKIPAIA
Sbjct: 155 IEKVLEEMRPYLVGAADGTLELVAIDEPIVKVRITGPAASVLTVRVAVTQKLREKIPAIA 214
Query: 228 AVQLL 232
AVQLL
Sbjct: 215 AVQLL 219
>gi|226495405|ref|NP_001148901.1| NFU3 [Zea mays]
gi|195623070|gb|ACG33365.1| NFU3 [Zea mays]
Length = 226
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/168 (85%), Positives = 156/168 (92%)
Query: 65 RNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACG 124
R V++AVA PD AIELPLTAEN+E VLDE+RPYL++DGGNVALHEIDGNVVRLKLQGACG
Sbjct: 58 RQVVQAVANPDPAIELPLTAENVEMVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGACG 117
Query: 125 SCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAG 184
SCP+SV TMKMGIERRLMEKIPEIVAVE +ADEETGLELN+ENIEKVL+EIRPYL G G
Sbjct: 118 SCPASVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNQENIEKVLDEIRPYLAGTGG 177
Query: 185 GSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
G LE VTI+EPIVKVR+TGPAAGVMTVRVA+TQKLREKIP IAAVQLL
Sbjct: 178 GELEFVTIEEPIVKVRLTGPAAGVMTVRVALTQKLREKIPKIAAVQLL 225
>gi|297792273|ref|XP_002864021.1| hypothetical protein ARALYDRAFT_331396 [Arabidopsis lyrata subsp.
lyrata]
gi|297309856|gb|EFH40280.1| hypothetical protein ARALYDRAFT_331396 [Arabidopsis lyrata subsp.
lyrata]
Length = 707
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 161/235 (68%), Positives = 181/235 (77%), Gaps = 4/235 (1%)
Query: 1 MQGVVLNPS-YSR-PHQTLDSPSCSRPASKSTKSFFGERVSLTRWR-NPVCHSSCRLLLI 57
MQ + LNP+ SR P Q LD S SR + L W NP+ R L
Sbjct: 1 MQLLTLNPAAISRTPSQALDPSSSSRLLPSPQILSSQRALGLVAWPCNPLRRGLSRSLSS 60
Query: 58 RKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRL 117
R+ R V+KAVATPD +E+PLT EN+ESVLDEIRPYL+SDGGNVALHEIDGN+VR+
Sbjct: 61 RQL-FRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRV 119
Query: 118 KLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRP 177
KLQGACGSCPSS MTMKMGIERRLMEKIPEIVAVE+VADEETGLELNEENIEKVLEEIRP
Sbjct: 120 KLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEAVADEETGLELNEENIEKVLEEIRP 179
Query: 178 YLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
YL+G A GSL+LV I++PIVK+RITGPAAGVMTVRVAVTQKLREKIP + L+
Sbjct: 180 YLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPRSFSFALI 234
>gi|238014236|gb|ACR38153.1| unknown [Zea mays]
gi|413925507|gb|AFW65439.1| NFU3 [Zea mays]
Length = 226
Score = 292 bits (747), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 143/168 (85%), Positives = 156/168 (92%)
Query: 65 RNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACG 124
R V++AVA PD AIELPLTAEN+E VLDE+RPYL++DGGNVALHEIDGNVVRLKLQGACG
Sbjct: 58 RQVVQAVANPDPAIELPLTAENVEMVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGACG 117
Query: 125 SCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAG 184
SCP+SV TMKMGIERRLMEKIPEIVAVE +ADEETGLELN+ENIEKVL+EIRPYL G G
Sbjct: 118 SCPASVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNQENIEKVLDEIRPYLAGTGG 177
Query: 185 GSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
G LE VTI+EPIVKVR+TGPAAGVMTVRVA+TQKLREKIP IAAVQLL
Sbjct: 178 GELEFVTIEEPIVKVRLTGPAAGVMTVRVALTQKLREKIPKIAAVQLL 225
>gi|218185367|gb|EEC67794.1| hypothetical protein OsI_35353 [Oryza sativa Indica Group]
Length = 228
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 140/169 (82%), Positives = 156/169 (92%)
Query: 64 RRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGAC 123
++ V+KA+A PD A+ELPLTAEN+E VLDE+RPYL++DGGNVALHEIDGNVVRLKLQGAC
Sbjct: 59 QQQVVKAIANPDPAVELPLTAENVEIVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGAC 118
Query: 124 GSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAA 183
GSCP+SV TMKMGIERRLMEKIPEIVAVE +ADEETGLELN+ENIEKVL+EIRPYL G
Sbjct: 119 GSCPASVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNQENIEKVLDEIRPYLSGTG 178
Query: 184 GGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
GG LE V I+EPIVKVR+TGPAAGVMTVRVA+TQKLREKIP IAAVQLL
Sbjct: 179 GGELEFVAIEEPIVKVRLTGPAAGVMTVRVALTQKLREKIPKIAAVQLL 227
>gi|115484477|ref|NP_001065900.1| Os11g0181500 [Oryza sativa Japonica Group]
gi|108864066|gb|ABG22389.1| nitrogen fixation protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113644604|dbj|BAF27745.1| Os11g0181500 [Oryza sativa Japonica Group]
gi|215695304|dbj|BAG90495.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765607|dbj|BAG87304.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222615626|gb|EEE51758.1| hypothetical protein OsJ_33192 [Oryza sativa Japonica Group]
Length = 228
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 140/169 (82%), Positives = 156/169 (92%)
Query: 64 RRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGAC 123
++ V+KA+A PD A+ELPLTAEN+E VLDE+RPYL++DGGNVALHEIDGNVVRLKLQGAC
Sbjct: 59 QQQVVKAIANPDPAVELPLTAENVEIVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGAC 118
Query: 124 GSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAA 183
GSCP+SV TMKMGIERRLMEKIPEIVAVE +ADEETGLELN+ENIEKVL+EIRPYL G
Sbjct: 119 GSCPASVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNQENIEKVLDEIRPYLSGTG 178
Query: 184 GGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
GG LE V I+EPIVKVR+TGPAAGVMTVRVA+TQKLREKIP IAAVQLL
Sbjct: 179 GGELEFVAIEEPIVKVRLTGPAAGVMTVRVALTQKLREKIPKIAAVQLL 227
>gi|357157352|ref|XP_003577769.1| PREDICTED: nifU-like protein 2, chloroplastic-like [Brachypodium
distachyon]
Length = 223
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/167 (82%), Positives = 154/167 (92%)
Query: 66 NVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGS 125
V++A+A PD A+ELPLTAEN+E VLDE+RPYL++DGGNV LHEI+GNVVRLKLQGACGS
Sbjct: 56 QVVQAIANPDPAVELPLTAENVELVLDEVRPYLMADGGNVVLHEINGNVVRLKLQGACGS 115
Query: 126 CPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGG 185
CP+SV TMKMGIERRLMEKIPEIVAVE +ADEETGLELNEENIEKVL+EIRPYL G GG
Sbjct: 116 CPASVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLDEIRPYLSGTGGG 175
Query: 186 SLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
LE V+I+EPIVKVR+TGPAAGVMTVRVA+TQKLREKIP IAAVQLL
Sbjct: 176 ELEFVSIEEPIVKVRLTGPAAGVMTVRVALTQKLREKIPKIAAVQLL 222
>gi|62734078|gb|AAX96187.1| Similar to seven transmembrane protein Mlo4 [Oryza sativa Japonica
Group]
Length = 980
Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 136/159 (85%), Positives = 148/159 (93%)
Query: 74 PDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTM 133
PD A+ELPLTAEN+E VLDE+RPYL++DGGNVALHEIDGNVVRLKLQGACGSCP+SV TM
Sbjct: 562 PDPAVELPLTAENVEIVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTM 621
Query: 134 KMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID 193
KMGIERRLMEKIPEIVAVE +ADEETGLELN+ENIEKVL+EIRPYL G GG LE V I+
Sbjct: 622 KMGIERRLMEKIPEIVAVEPIADEETGLELNQENIEKVLDEIRPYLSGTGGGELEFVAIE 681
Query: 194 EPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
EPIVKVR+TGPAAGVMTVRVA+TQKLREKIP IAAVQLL
Sbjct: 682 EPIVKVRLTGPAAGVMTVRVALTQKLREKIPKIAAVQLL 720
>gi|326530153|dbj|BAK08356.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/162 (84%), Positives = 150/162 (92%)
Query: 71 VATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSV 130
+A PD A+ELPLTAEN+E VLDE+RPYL++DGGNV LHEIDGNVVRLKLQGACGSCP+SV
Sbjct: 65 IANPDPAVELPLTAENVELVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGACGSCPASV 124
Query: 131 MTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELV 190
TMKMGIERRLMEKIPEIVAVE +ADEETGLELNEENIEKVL+EIRPYL G GG LE V
Sbjct: 125 TTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLDEIRPYLSGTGGGELEFV 184
Query: 191 TIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
+I+EPIVKVR+TGPAAGVMTVRVA+TQKLREKIP IAAVQLL
Sbjct: 185 SIEEPIVKVRLTGPAAGVMTVRVALTQKLREKIPKIAAVQLL 226
>gi|326526691|dbj|BAK00734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/162 (84%), Positives = 150/162 (92%)
Query: 71 VATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSV 130
+A PD A+ELPLTAEN+E VLDE+RPYL++DGGNV LHEIDGNVVRLKLQGACGSCP+SV
Sbjct: 63 IANPDPAVELPLTAENVELVLDEVRPYLMADGGNVVLHEIDGNVVRLKLQGACGSCPASV 122
Query: 131 MTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELV 190
TMKMGIERRLMEKIPEIVAVE +ADEETGLELNEENIEKVL+EIRPYL G GG LE V
Sbjct: 123 TTMKMGIERRLMEKIPEIVAVEPIADEETGLELNEENIEKVLDEIRPYLSGTGGGELEFV 182
Query: 191 TIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
+I+EPIVKVR+TGPAAGVMTVRVA+TQKLREKIP IAAVQLL
Sbjct: 183 SIEEPIVKVRLTGPAAGVMTVRVALTQKLREKIPKIAAVQLL 224
>gi|242067665|ref|XP_002449109.1| hypothetical protein SORBIDRAFT_05g005270 [Sorghum bicolor]
gi|241934952|gb|EES08097.1| hypothetical protein SORBIDRAFT_05g005270 [Sorghum bicolor]
Length = 225
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/160 (85%), Positives = 149/160 (93%)
Query: 73 TPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMT 132
PD AI+LPLTAEN+E VLDE+RPYL++DGGNVALHEIDGN+VRLKLQGACGSCP+SV T
Sbjct: 65 NPDPAIKLPLTAENVEMVLDEVRPYLMADGGNVALHEIDGNMVRLKLQGACGSCPASVTT 124
Query: 133 MKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTI 192
MKMGIERRLMEKIPEIVAVE +ADEETGLELN+ENIEKVL+EIRPYL G GG LE VTI
Sbjct: 125 MKMGIERRLMEKIPEIVAVEPIADEETGLELNQENIEKVLDEIRPYLAGTGGGELEFVTI 184
Query: 193 DEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
+EPIVKVR+TGPAAGVMTVRVA+TQKLREKIP IAAVQLL
Sbjct: 185 EEPIVKVRLTGPAAGVMTVRVALTQKLREKIPKIAAVQLL 224
>gi|116783204|gb|ABK22836.1| unknown [Picea sitchensis]
Length = 248
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 137/175 (78%), Positives = 154/175 (88%)
Query: 58 RKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRL 117
R++ RR+V++A+A+P S L LT EN+E VLDE+RPYL+SDGGNV L++IDG VV+L
Sbjct: 74 RQQQRGRRHVVEAIASPPSTEGLALTEENVEMVLDEVRPYLMSDGGNVELYDIDGLVVKL 133
Query: 118 KLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRP 177
KLQGACGSCPSS+MTMKMGIERRLME+IPEIVAVE V D ETGLELNEEN+EKVL EIRP
Sbjct: 134 KLQGACGSCPSSLMTMKMGIERRLMEQIPEIVAVEQVMDGETGLELNEENVEKVLAEIRP 193
Query: 178 YLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
YLVG GG LELV I+EPIVKVRI GPAAGVMTVRVAVTQKLREKIPAIAAVQLL
Sbjct: 194 YLVGTGGGELELVEIEEPIVKVRIGGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 248
>gi|194319991|pdb|2Z51|A Chain A, Crystal Structure Of Arabidopsis Cnfu Involved In Iron-
Sulfur Cluster Biosynthesis
Length = 154
Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 134/153 (87%), Positives = 147/153 (96%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+PLT EN+ESVLDEIRPYL+SDGGNVALHEIDGNVVR+KLQGACGSCPSS MTMKMGIER
Sbjct: 2 VPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNVVRVKLQGACGSCPSSTMTMKMGIER 61
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
RLMEKIPEIVAVE++ DEETGLELNEENIEKVLEEIRPYL+G A GSL+LV I++PIVK+
Sbjct: 62 RLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKI 121
Query: 200 RITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
RITGPAAGVMTVRVAVTQKLREKIP+IAAVQL+
Sbjct: 122 RITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 154
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 11/112 (9%)
Query: 48 CHSSCRLLLIRKRGAARR------NVIKAVATPDSAIELPLTAENIESVLDEIRPYLISD 101
C S + K G RR ++ A PD L L ENIE VL+EIRPYLI
Sbjct: 45 CGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGT 104
Query: 102 G-GNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
G++ L EI+ +V++++ G + VMT+++ + ++L EKIP I AV+
Sbjct: 105 ADGSLDLVEIEDPIVKIRITGPA----AGVMTVRVAVTQKLREKIPSIAAVQ 152
>gi|8777425|dbj|BAA97015.1| unnamed protein product [Arabidopsis thaliana]
Length = 684
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 129/167 (77%), Positives = 145/167 (86%), Gaps = 1/167 (0%)
Query: 45 NPVCHSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGN 104
NP+ R L R+ R V+KAVATPD +E+PLT EN+ESVLDEIRPYL+SDGGN
Sbjct: 49 NPLRRGLSRFLSSRQL-FRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGN 107
Query: 105 VALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELN 164
VALHEIDGN+VR+KLQGACGSCPSS MTMKMGIERRLMEKIPEIVAVE++ DEETGLELN
Sbjct: 108 VALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELN 167
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTV 211
EENIEKVLEEIRPYL+G A GSL+LV I++PIVK+RITGPAAGVMTV
Sbjct: 168 EENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTV 214
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 7/88 (7%)
Query: 151 VESVADEETGLE--LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA--- 205
V++VA + LE L EEN+E VL+EIRPYL+ + GG++ L ID IV+V++ G
Sbjct: 71 VKAVATPDPILEVPLTEENVESVLDEIRPYLM-SDGGNVALHEIDGNIVRVKLQGACGSC 129
Query: 206 -AGVMTVRVAVTQKLREKIPAIAAVQLL 232
+ MT+++ + ++L EKIP I AV+ L
Sbjct: 130 PSSTMTMKMGIERRLMEKIPEIVAVEAL 157
>gi|116781227|gb|ABK22014.1| unknown [Picea sitchensis]
Length = 238
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 139/226 (61%), Positives = 167/226 (73%), Gaps = 5/226 (2%)
Query: 10 YSRPHQTLDSPSCSRPASKSTKS---FFGERVSLTRWRNPVCHSSCRLLLIRKRGAARRN 66
+S ++L++P P +KS+ S F + SL + H L + R ++
Sbjct: 15 HSSSLRSLNTPGL--PLAKSSISNPGAFAAKNSLLLGGHAPRHLVLGNTLHQSRQTRGKH 72
Query: 67 VIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSC 126
VI+A+ATP + L LT ENIE +LDE+RPYL++DGGNV LHEIDGNVV LKLQGACGSC
Sbjct: 73 VIEAIATPPTTGGLALTVENIEMILDEVRPYLMADGGNVELHEIDGNVVTLKLQGACGSC 132
Query: 127 PSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGS 186
PSS+ TMK GIE RLMEKIPEI+AV+ V D ETGLEL EEN+EK+L EIRPYL G GG
Sbjct: 133 PSSMTTMKTGIEGRLMEKIPEIIAVKQVFDMETGLELTEENVEKILAEIRPYLSGTGGGD 192
Query: 187 LELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
LE V ID+P+VKVRI+GPAA VMTVRVA+TQKLREKIPAIAAVQLL
Sbjct: 193 LEFVKIDDPVVKVRISGPAAEVMTVRVALTQKLREKIPAIAAVQLL 238
>gi|413925509|gb|AFW65441.1| hypothetical protein ZEAMMB73_197216 [Zea mays]
Length = 145
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 125/143 (87%), Positives = 135/143 (94%)
Query: 90 VLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV 149
VLDE+RPYL++DGGNVALHEIDGNVVRLKLQGACGSCP+SV TMKMGIERRLMEKIPEIV
Sbjct: 2 VLDEVRPYLMADGGNVALHEIDGNVVRLKLQGACGSCPASVTTMKMGIERRLMEKIPEIV 61
Query: 150 AVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVM 209
AVE +ADEETGLELN+ENIEKVL+EIRPYL G GG LE VTI+EPIVKVR+TGPAAGVM
Sbjct: 62 AVEPIADEETGLELNQENIEKVLDEIRPYLAGTGGGELEFVTIEEPIVKVRLTGPAAGVM 121
Query: 210 TVRVAVTQKLREKIPAIAAVQLL 232
TVRVA+TQKLREKIP IAAVQLL
Sbjct: 122 TVRVALTQKLREKIPKIAAVQLL 144
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLI-SDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTM 133
D L L ENIE VLDEIRPYL + GG + I+ +V+++L G + VMT+
Sbjct: 68 DEETGLELNQENIEKVLDEIRPYLAGTGGGELEFVTIEEPIVKVRLTGPA----AGVMTV 123
Query: 134 KMGIERRLMEKIPEIVAVE 152
++ + ++L EKIP+I AV+
Sbjct: 124 RVALTQKLREKIPKIAAVQ 142
>gi|357160726|ref|XP_003578857.1| PREDICTED: nifU-like protein 2, chloroplastic-like [Brachypodium
distachyon]
Length = 242
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 119/166 (71%), Positives = 143/166 (86%)
Query: 67 VIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSC 126
V++ +A P + PLTAEN+E VLDE+RPYLI+DGGNVA HEIDGNVVRLKLQGACGSC
Sbjct: 76 VVQPIADPTPVVHSPLTAENVELVLDEVRPYLIADGGNVAFHEIDGNVVRLKLQGACGSC 135
Query: 127 PSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGS 186
P SVMTM+MGI+RRLM+KIP+IVAVE++ D+ETGL+LNEEN+EKVLEEIRPYL GA GG
Sbjct: 136 PGSVMTMRMGIQRRLMDKIPQIVAVEAITDKETGLKLNEENVEKVLEEIRPYLAGAGGGK 195
Query: 187 LELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
L+ V ++ P KV++TGPAA V +VR AV QKLREKIP+IAAV+LL
Sbjct: 196 LKFVAVERPFAKVQLTGPAADVASVRGAVAQKLREKIPSIAAVRLL 241
>gi|168012112|ref|XP_001758746.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689883|gb|EDQ76252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 153
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/153 (81%), Positives = 134/153 (87%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT EN+E VLDE+RPYLISDGGNVALHEIDG VV+LKLQGACGSCPSS MTM+MGIER
Sbjct: 1 LELTEENVELVLDEVRPYLISDGGNVALHEIDGLVVKLKLQGACGSCPSSTMTMRMGIER 60
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
RL+E+IPEIVAVE + DEETGL L EEN+E VL EIRPYLVG GG LELV ID P+VKV
Sbjct: 61 RLIERIPEIVAVEQIMDEETGLALTEENVEAVLGEIRPYLVGTGGGELELVKIDGPVVKV 120
Query: 200 RITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
R+ GPAA VMTVRVAVTQKLREKIP IAAVQLL
Sbjct: 121 RLGGPAASVMTVRVAVTQKLREKIPMIAAVQLL 153
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLI-SDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTM 133
D L LT EN+E+VL EIRPYL+ + GG + L +IDG VV+++L G +SVMT+
Sbjct: 77 DEETGLALTEENVEAVLGEIRPYLVGTGGGELELVKIDGPVVKVRLGGPA----ASVMTV 132
Query: 134 KMGIERRLMEKIPEIVAVE 152
++ + ++L EKIP I AV+
Sbjct: 133 RVAVTQKLREKIPMIAAVQ 151
>gi|302792717|ref|XP_002978124.1| hypothetical protein SELMODRAFT_108525 [Selaginella moellendorffii]
gi|300154145|gb|EFJ20781.1| hypothetical protein SELMODRAFT_108525 [Selaginella moellendorffii]
Length = 185
Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 126/166 (75%), Positives = 139/166 (83%), Gaps = 3/166 (1%)
Query: 70 AVATPDSAIE---LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSC 126
AVAT ++A L LT EN+E VLDE+RPYL+SDGGNVAL EIDG VV+LKLQGACGSC
Sbjct: 20 AVATQETAATDDGLALTEENVEMVLDEVRPYLMSDGGNVALEEIDGLVVKLKLQGACGSC 79
Query: 127 PSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGS 186
PSS+MTMKMGIE RL EKIPEI+ VE V D ETGLEL EEN++K+L EIRPYLVG GG
Sbjct: 80 PSSLMTMKMGIEARLKEKIPEIIGVEQVQDTETGLELTEENVDKILSEIRPYLVGTGGGE 139
Query: 187 LELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
L LV ID P+VK+RI GPAAGVMTVRVAVTQKLREKIP IAAVQLL
Sbjct: 140 LTLVKIDGPVVKIRIEGPAAGVMTVRVAVTQKLREKIPMIAAVQLL 185
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
Query: 48 CHSSCRLLLIRKRGAARR------NVIKAVATPDSAIELPLTAENIESVLDEIRPYLI-S 100
C S L+ K G R +I D+ L LT EN++ +L EIRPYL+ +
Sbjct: 76 CGSCPSSLMTMKMGIEARLKEKIPEIIGVEQVQDTETGLELTEENVDKILSEIRPYLVGT 135
Query: 101 DGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
GG + L +IDG VV+++++G + VMT+++ + ++L EKIP I AV+
Sbjct: 136 GGGELTLVKIDGPVVKIRIEGPA----AGVMTVRVAVTQKLREKIPMIAAVQ 183
>gi|449461189|ref|XP_004148324.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Cucumis
sativus]
gi|449510563|ref|XP_004163700.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Cucumis
sativus]
Length = 227
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 135/226 (59%), Positives = 156/226 (69%), Gaps = 9/226 (3%)
Query: 7 NPSYSRPHQTLDSPSCSRPASKSTKSFFGERVSLTRWRNPVCHSSCRLLLIRKRGAARRN 66
P S P S S PAS S SFF + +R C R L R
Sbjct: 10 QPFKSTPIAATLYRSPSHPASPSYLSFFKS----SFFRGQFCS---RHFLRFNSSCTRIR 62
Query: 67 VIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSC 126
+ V +P LPLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSC
Sbjct: 63 HLGNVVSPSCV--LPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSC 120
Query: 127 PSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGS 186
PSS MT+KMGIE RL +KIPEI+ VE + D ETGLELNEEN+EKVL EIRPYL G GG
Sbjct: 121 PSSTMTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGI 180
Query: 187 LELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
LE++ I + +VKVR++GPAAGVMTVRVA+TQKLREKIPAIAAVQL+
Sbjct: 181 LEVIEIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLI 226
>gi|242082972|ref|XP_002441911.1| hypothetical protein SORBIDRAFT_08g004740 [Sorghum bicolor]
gi|241942604|gb|EES15749.1| hypothetical protein SORBIDRAFT_08g004740 [Sorghum bicolor]
Length = 227
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/188 (65%), Positives = 151/188 (80%), Gaps = 4/188 (2%)
Query: 45 NPVCHSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGN 104
N C + + + +RGA V +AVA ++ ++LPLT N+ESVLDE+RPYLI+DGG+
Sbjct: 43 NWECDDANWVRWMFRRGA----VARAVAGLNTMVQLPLTTGNVESVLDEVRPYLIADGGD 98
Query: 105 VALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELN 164
VALHEI+GNVVRLKLQGACGSCPSSV TMKM I+RRLME IPEI AVE VAD+E GL+LN
Sbjct: 99 VALHEINGNVVRLKLQGACGSCPSSVTTMKMRIQRRLMENIPEISAVERVADKEMGLKLN 158
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIP 224
E N++KVL EIRPYL G GG LEL+ I +VKVR+TG AAGV TVRVA+TQKLREKIP
Sbjct: 159 EANVQKVLAEIRPYLAGKGGGELELIKIVGHVVKVRLTGRAAGVKTVRVALTQKLREKIP 218
Query: 225 AIAAVQLL 232
+IAA+++L
Sbjct: 219 SIAAIRVL 226
>gi|255582605|ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
gi|223528244|gb|EEF30298.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
Length = 220
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/227 (59%), Positives = 158/227 (69%), Gaps = 8/227 (3%)
Query: 6 LNPSYSRPHQTLDSPSCSRPASKSTKSFFGERVSLTRWRNPVCHSSCRLLLIRKRGAARR 65
+NPS S +T +P S F + + R + + H S K A R
Sbjct: 1 MNPSLSLSERTHCLSLFKKPVSDFC-IFSSRKNAFLRGQFHIRHFSSI-----KLNRAPR 54
Query: 66 NVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGS 125
V +P LPLT EN+E VLDE+RP L++DGGNV LHEIDG VV LKLQGACGS
Sbjct: 55 KFAGLVVSPSCV--LPLTEENVEKVLDEVRPGLMADGGNVVLHEIDGLVVVLKLQGACGS 112
Query: 126 CPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGG 185
CPSS MT+KMGIE RL +KIPEI+AVE + D ETGLELN+EN+EKVL EIRPYL G GG
Sbjct: 113 CPSSTMTLKMGIETRLRDKIPEIMAVEQILDTETGLELNDENVEKVLAEIRPYLAGTGGG 172
Query: 186 SLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
LELV ID+ IVKVR++GPAAGVMTVRVA+TQKLR+KIPAIAAVQL+
Sbjct: 173 VLELVQIDDYIVKVRLSGPAAGVMTVRVALTQKLRDKIPAIAAVQLI 219
>gi|115469688|ref|NP_001058443.1| Os06g0694500 [Oryza sativa Japonica Group]
gi|53791826|dbj|BAD53892.1| putative Nuclear-encoded plastid gene, NifU1 [Oryza sativa Japonica
Group]
gi|53792847|dbj|BAD53880.1| putative Nuclear-encoded plastid gene, NifU1 [Oryza sativa Japonica
Group]
gi|113596483|dbj|BAF20357.1| Os06g0694500 [Oryza sativa Japonica Group]
gi|215678926|dbj|BAG96356.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695250|dbj|BAG90441.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218198813|gb|EEC81240.1| hypothetical protein OsI_24300 [Oryza sativa Indica Group]
gi|222636145|gb|EEE66277.1| hypothetical protein OsJ_22478 [Oryza sativa Japonica Group]
Length = 219
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/152 (76%), Positives = 134/152 (88%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT EN+E VLD++RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE
Sbjct: 66 LPLTEENVEMVLDQVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIET 125
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
RL +KIPEI+AVE + D ETGLELN +N++KVL+EIRPYL G GGSL+LV IDE +VKV
Sbjct: 126 RLRDKIPEILAVEQIVDTETGLELNHDNVDKVLDEIRPYLSGTGGGSLDLVQIDESVVKV 185
Query: 200 RITGPAAGVMTVRVAVTQKLREKIPAIAAVQL 231
R+TGPAAGVMTVRVAVTQKLREKIP+I AVQL
Sbjct: 186 RLTGPAAGVMTVRVAVTQKLREKIPSILAVQL 217
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLI-SDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTM 133
D+ L L +N++ VLDEIRPYL + GG++ L +ID +VV+++L G + VMT+
Sbjct: 142 DTETGLELNHDNVDKVLDEIRPYLSGTGGGSLDLVQIDESVVKVRLTGPA----AGVMTV 197
Query: 134 KMGIERRLMEKIPEIVAVE 152
++ + ++L EKIP I+AV+
Sbjct: 198 RVAVTQKLREKIPSILAVQ 216
>gi|326487760|dbj|BAK05552.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 112/167 (67%), Positives = 141/167 (84%)
Query: 66 NVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGS 125
V++ +A P+ ++ LTAEN+E VLD++RPYL++DGGNVALHEIDGNVVRLKLQGACG+
Sbjct: 52 QVVQPIADPNPVVDSSLTAENVELVLDQVRPYLMADGGNVALHEIDGNVVRLKLQGACGA 111
Query: 126 CPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGG 185
CP SVMTM+MGI+RRLM++IPEI AVE++ D E GL+L +EN+EKVL+EIRPYL GA GG
Sbjct: 112 CPGSVMTMRMGIQRRLMDEIPEIAAVEAITDNEAGLKLKKENVEKVLDEIRPYLTGAGGG 171
Query: 186 SLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
+L V I+ VKV++ GPAAGV +RVAV QKLREKIP+I+AVQLL
Sbjct: 172 NLRFVAINRFFVKVQLRGPAAGVAAIRVAVAQKLREKIPSISAVQLL 218
>gi|115487614|ref|NP_001066294.1| Os12g0176200 [Oryza sativa Japonica Group]
gi|75147032|sp|Q84LK7.1|NIFU1_ORYSJ RecName: Full=NifU-like protein 1, chloroplastic; AltName:
Full=OsNifu1; Flags: Precursor
gi|30698492|dbj|BAC76603.1| NifU1 [Oryza sativa Japonica Group]
gi|77553807|gb|ABA96603.1| nitrogen fixation protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113648801|dbj|BAF29313.1| Os12g0176200 [Oryza sativa Japonica Group]
Length = 226
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/168 (70%), Positives = 143/168 (85%), Gaps = 2/168 (1%)
Query: 67 VIKAVA--TPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACG 124
V+ A+A P +A++LPLTA N+ESVLD++RPYL +DGG+VALHEI GNVVRLKLQGACG
Sbjct: 58 VVGAIAGLDPVTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACG 117
Query: 125 SCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAG 184
SCPSS++T+K GIERRLMEKIP++ AVE V D+ETGLELNEEN+EKVL EIRPYL G G
Sbjct: 118 SCPSSLITIKRGIERRLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGG 177
Query: 185 GSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
G L+ + I PIVKVR+TGPAA V TVR+AV++KLREKIP+I VQLL
Sbjct: 178 GGLQFLMIKGPIVKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIVQLL 225
>gi|222616724|gb|EEE52856.1| hypothetical protein OsJ_35404 [Oryza sativa Japonica Group]
Length = 219
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/168 (70%), Positives = 143/168 (85%), Gaps = 2/168 (1%)
Query: 67 VIKAVA--TPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACG 124
V+ A+A P +A++LPLTA N+ESVLD++RPYL +DGG+VALHEI GNVVRLKLQGACG
Sbjct: 51 VVGAIAGLDPVTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACG 110
Query: 125 SCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAG 184
SCPSS++T+K GIERRLMEKIP++ AVE V D+ETGLELNEEN+EKVL EIRPYL G G
Sbjct: 111 SCPSSLITIKRGIERRLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGG 170
Query: 185 GSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
G L+ + I PIVKVR+TGPAA V TVR+AV++KLREKIP+I VQLL
Sbjct: 171 GGLQFLMIKGPIVKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIVQLL 218
>gi|225446006|ref|XP_002268218.1| PREDICTED: nifU-like protein 3, chloroplastic [Vitis vinifera]
gi|297735420|emb|CBI17860.3| unnamed protein product [Vitis vinifera]
Length = 237
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/153 (77%), Positives = 134/153 (87%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE
Sbjct: 83 LPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIET 142
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
RL +KIPEI AVE + D ETGLELNEEN+EKVL EIRPYL G GG LELV I++ ++KV
Sbjct: 143 RLRDKIPEIEAVEQILDTETGLELNEENVEKVLAEIRPYLAGTGGGVLELVQINDYVIKV 202
Query: 200 RITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
R++GPAAGVMTVRVA+TQKLREKIPAIAAVQL+
Sbjct: 203 RLSGPAAGVMTVRVALTQKLREKIPAIAAVQLI 235
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLISDGGNV-ALHEIDGNVVRLKLQGACGSCPSSVMTM 133
D+ L L EN+E VL EIRPYL GG V L +I+ V++++L G + VMT+
Sbjct: 159 DTETGLELNEENVEKVLAEIRPYLAGTGGGVLELVQINDYVIKVRLSGPA----AGVMTV 214
Query: 134 KMGIERRLMEKIPEIVAVE 152
++ + ++L EKIP I AV+
Sbjct: 215 RVALTQKLREKIPAIAAVQ 233
>gi|118487917|gb|ABK95780.1| unknown [Populus trichocarpa]
Length = 224
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/228 (57%), Positives = 155/228 (67%), Gaps = 5/228 (2%)
Query: 5 VLNPSYSRPHQTLDSPSCSRPASKSTKSFFGERVSLTRWRNPVCHSSCRLLLIRKRGAAR 64
+LNP S +T S A + ++ + R + HS R L K R
Sbjct: 1 MLNPFLSLAQKTQQSLLFKTDAVSDSCGLSSKQNAFLRGQFQF-HS--RHFLHFKLNRGR 57
Query: 65 RNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACG 124
V +P LPLT EN+E VLDE+RP L+ DGGNVALHEIDG VV LKLQGACG
Sbjct: 58 MKCTGVVVSPSCV--LPLTEENVEKVLDEVRPGLMRDGGNVALHEIDGLVVVLKLQGACG 115
Query: 125 SCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAG 184
SCPSS MT+KMGIE +L +KIPEI+ VE + D ETGLELNEEN+EK L EIRPYL G G
Sbjct: 116 SCPSSSMTLKMGIETKLRDKIPEIMDVEQIMDTETGLELNEENVEKALAEIRPYLAGTGG 175
Query: 185 GSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
G LELV I++ +VKVR++GPAAGVMTVRVA+TQKLRE IPAIAAVQL+
Sbjct: 176 GVLELVQINDYVVKVRLSGPAAGVMTVRVALTQKLRETIPAIAAVQLI 223
>gi|255083372|ref|XP_002504672.1| predicted protein [Micromonas sp. RCC299]
gi|226519940|gb|ACO65930.1| predicted protein [Micromonas sp. RCC299]
Length = 192
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/177 (67%), Positives = 144/177 (81%), Gaps = 2/177 (1%)
Query: 58 RKRGAARRNVIKAVATPDSAI--ELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVV 115
R G+ R ++ A +S+I +L LTA+N+E VLDE+RPYLI+DGG+V L EIDG VV
Sbjct: 15 RAAGSRVRRIVTVRAAGESSISEKLELTADNVEKVLDEVRPYLIADGGDVELVEIDGLVV 74
Query: 116 RLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEI 175
RLKL GACGSCPSS +TM+MGIE+RLMEKIPEI+ VE + DE GL+L EEN+E L+EI
Sbjct: 75 RLKLNGACGSCPSSTVTMRMGIEKRLMEKIPEIMEVEQIQDEAGGLDLTEENVEATLDEI 134
Query: 176 RPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
RPYL G GG LELV I++PIVKVR+TGPAA VMTVRVAVTQKLREK+P+IAAVQLL
Sbjct: 135 RPYLAGTGGGQLELVDIEDPIVKVRLTGPAASVMTVRVAVTQKLREKMPSIAAVQLL 191
>gi|357449361|ref|XP_003594957.1| NifU-like protein [Medicago truncatula]
gi|355484005|gb|AES65208.1| NifU-like protein [Medicago truncatula]
Length = 242
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/177 (68%), Positives = 144/177 (81%), Gaps = 4/177 (2%)
Query: 56 LIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVV 115
LI +R A RN V +P LPLT EN+E VLDE+RP L++DGGNVALHEIDG VV
Sbjct: 69 LISRR--APRNKAGFVVSPRCV--LPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVV 124
Query: 116 RLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEI 175
LKLQGACGSCPSS MT+KMGIE RL +KIPEI+ VE + D ETGLEL E+N+E VL EI
Sbjct: 125 ILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQILDTETGLELTEDNVESVLSEI 184
Query: 176 RPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
RPYL+G GG+LELV I++ IVKVR++GPAAGVMTVRVA+TQKLR+KIP+IAAVQL+
Sbjct: 185 RPYLIGTGGGTLELVEINDYIVKVRLSGPAAGVMTVRVALTQKLRDKIPSIAAVQLI 241
>gi|356556204|ref|XP_003546416.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Glycine max]
Length = 236
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/172 (69%), Positives = 138/172 (80%), Gaps = 2/172 (1%)
Query: 61 GAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQ 120
G + RN V +P LPLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQ
Sbjct: 66 GHSPRNKAGGVVSPRCG--LPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQ 123
Query: 121 GACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLV 180
GACGSCPSS MT+KMGIE RL +KIPEI+ VE + D ETGLEL EEN+E VL EIRPYLV
Sbjct: 124 GACGSCPSSAMTLKMGIETRLRDKIPEILEVEQIMDTETGLELTEENVENVLSEIRPYLV 183
Query: 181 GAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
G GG LELV I + +VKVR++GPAAGV TVRVA+TQKLR+KIPAIAAVQL+
Sbjct: 184 GTGGGILELVQIKDYVVKVRLSGPAAGVTTVRVALTQKLRDKIPAIAAVQLI 235
>gi|346467251|gb|AEO33470.1| hypothetical protein [Amblyomma maculatum]
Length = 211
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/135 (83%), Positives = 123/135 (91%)
Query: 64 RRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGAC 123
R IKA+ATPD +ELPLTAEN+ESVLDE+RPYLISDGGNVALHEIDGNVVRLKLQGAC
Sbjct: 76 RNQAIKAIATPDPVLELPLTAENVESVLDEVRPYLISDGGNVALHEIDGNVVRLKLQGAC 135
Query: 124 GSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAA 183
GSCPSSVMTMKMGI+RRLMEKIPEIVAVE V DEETGLELN ENIEKVL++IRPYLVG
Sbjct: 136 GSCPSSVMTMKMGIQRRLMEKIPEIVAVEPVTDEETGLELNNENIEKVLDKIRPYLVGTG 195
Query: 184 GGSLELVTIDEPIVK 198
GG LEL+ I+EPIV+
Sbjct: 196 GGELELIAIEEPIVE 210
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 59/91 (64%), Gaps = 7/91 (7%)
Query: 146 PEIVAVESVADEETGLEL--NEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITG 203
P A++++A + LEL EN+E VL+E+RPYL+ + GG++ L ID +V++++ G
Sbjct: 75 PRNQAIKAIATPDPVLELPLTAENVESVLDEVRPYLI-SDGGNVALHEIDGNVVRLKLQG 133
Query: 204 PA----AGVMTVRVAVTQKLREKIPAIAAVQ 230
+ VMT+++ + ++L EKIP I AV+
Sbjct: 134 ACGSCPSSVMTMKMGIQRRLMEKIPEIVAVE 164
>gi|384253504|gb|EIE26979.1| iron-sulfur cluster assembly protein [Coccomyxa subellipsoidea
C-169]
Length = 161
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 119/158 (75%), Positives = 131/158 (82%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMK 134
D L LT EN+E VLDEIRPYL++DGGNV L EIDG VV LKLQGACGSCPSS+ TM
Sbjct: 3 DVGQSLELTDENVELVLDEIRPYLMADGGNVQLVEIDGPVVYLKLQGACGSCPSSLTTMT 62
Query: 135 MGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDE 194
MGI+RRL EKIPEI+ +E + DE+TGLEL E+NIE VL+EIRPYLVG GG LELV I
Sbjct: 63 MGIKRRLQEKIPEILEIEQIMDEDTGLELTEDNIETVLDEIRPYLVGTGGGGLELVEISG 122
Query: 195 PIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
PIVKVRITGPAA VMTVRVAVTQKLREK PAIAAVQL+
Sbjct: 123 PIVKVRITGPAASVMTVRVAVTQKLREKFPAIAAVQLV 160
>gi|357123550|ref|XP_003563473.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Brachypodium
distachyon]
Length = 211
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 114/152 (75%), Positives = 131/152 (86%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+PLT EN+E VLDE+RP L++DGGNVALHEIDG VV L LQGACGSCPSS MT+KMGIE
Sbjct: 58 MPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVVLMLQGACGSCPSSTMTLKMGIET 117
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
RL +KIPEI+ VE + D ETGLELN EN+EKVL+EIRPYLVG GGSL+LV ID +VK+
Sbjct: 118 RLRDKIPEILEVEQIHDTETGLELNLENVEKVLDEIRPYLVGTGGGSLDLVQIDGFVVKI 177
Query: 200 RITGPAAGVMTVRVAVTQKLREKIPAIAAVQL 231
+I+GPAA VMTVRVAVTQKLREKIP+I AVQL
Sbjct: 178 QISGPAASVMTVRVAVTQKLREKIPSILAVQL 209
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLI-SDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTM 133
D+ L L EN+E VLDEIRPYL+ + GG++ L +IDG VV++++ G +SVMT+
Sbjct: 134 DTETGLELNLENVEKVLDEIRPYLVGTGGGSLDLVQIDGFVVKIQISGPA----ASVMTV 189
Query: 134 KMGIERRLMEKIPEIVAVE 152
++ + ++L EKIP I+AV+
Sbjct: 190 RVAVTQKLREKIPSILAVQ 208
>gi|302766397|ref|XP_002966619.1| hypothetical protein SELMODRAFT_230831 [Selaginella moellendorffii]
gi|300166039|gb|EFJ32646.1| hypothetical protein SELMODRAFT_230831 [Selaginella moellendorffii]
Length = 144
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 115/143 (80%), Positives = 125/143 (87%)
Query: 90 VLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV 149
VLDE+RPYL+SDGGNVAL EIDG VV+LKLQGACGSCPSS+MTMKMGIE RL EKIPEI+
Sbjct: 2 VLDEVRPYLMSDGGNVALEEIDGLVVKLKLQGACGSCPSSLMTMKMGIEARLKEKIPEII 61
Query: 150 AVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVM 209
VE V D ETGLEL EEN++K+L EIRPYLVG GG L LV ID P+VK+RI GPAAGVM
Sbjct: 62 GVEQVQDTETGLELTEENVDKILSEIRPYLVGTGGGELTLVKIDGPVVKIRIEGPAAGVM 121
Query: 210 TVRVAVTQKLREKIPAIAAVQLL 232
TVRVAVTQKLREKIP IAAVQLL
Sbjct: 122 TVRVAVTQKLREKIPMIAAVQLL 144
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
Query: 48 CHSSCRLLLIRKRGAARR------NVIKAVATPDSAIELPLTAENIESVLDEIRPYLI-S 100
C S L+ K G R +I D+ L LT EN++ +L EIRPYL+ +
Sbjct: 35 CGSCPSSLMTMKMGIEARLKEKIPEIIGVEQVQDTETGLELTEENVDKILSEIRPYLVGT 94
Query: 101 DGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
GG + L +IDG VV+++++G + VMT+++ + ++L EKIP I AV+
Sbjct: 95 GGGELTLVKIDGPVVKIRIEGPA----AGVMTVRVAVTQKLREKIPMIAAVQ 142
>gi|356530300|ref|XP_003533720.1| PREDICTED: nifU-like protein 3, chloroplastic-like isoform 1
[Glycine max]
gi|356530302|ref|XP_003533721.1| PREDICTED: nifU-like protein 3, chloroplastic-like isoform 2
[Glycine max]
Length = 235
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/153 (75%), Positives = 130/153 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE
Sbjct: 82 LPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSAMTLKMGIET 141
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
RL +KIPEI+ VE + D ETGLEL EEN+E VL EIRPYLVG GG LELV I + VKV
Sbjct: 142 RLRDKIPEILEVEQIMDTETGLELTEENVENVLSEIRPYLVGTGGGILELVQIKDYTVKV 201
Query: 200 RITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
R++GPAAGV TVRVA+TQKLR+KIPAIAAVQL+
Sbjct: 202 RLSGPAAGVTTVRVALTQKLRDKIPAIAAVQLI 234
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLISDGGNV-ALHEIDGNVVRLKLQGACGSCPSSVMTM 133
D+ L LT EN+E+VL EIRPYL+ GG + L +I V+++L G + V T+
Sbjct: 158 DTETGLELTEENVENVLSEIRPYLVGTGGGILELVQIKDYTVKVRLSGPA----AGVTTV 213
Query: 134 KMGIERRLMEKIPEIVAVE 152
++ + ++L +KIP I AV+
Sbjct: 214 RVALTQKLRDKIPAIAAVQ 232
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 160 GLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAV 215
GL L EEN+EKVL+E+RP L+ A GG++ L ID +V +++ G + MT+++ +
Sbjct: 81 GLPLTEENVEKVLDEVRPGLM-ADGGNVALHEIDGLVVVLKLQGACGSCPSSAMTLKMGI 139
Query: 216 TQKLREKIPAIAAVQ 230
+LR+KIP I V+
Sbjct: 140 ETRLRDKIPEILEVE 154
>gi|224126127|ref|XP_002329667.1| predicted protein [Populus trichocarpa]
gi|222870548|gb|EEF07679.1| predicted protein [Populus trichocarpa]
Length = 167
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/153 (75%), Positives = 131/153 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT EN+E VLDE+RP L+ DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE
Sbjct: 14 LPLTEENVEKVLDEVRPGLMRDGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIET 73
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
+L +KIPEI+ VE + D ETGLELNEEN+EK L EIRPYL G GG LELV I++ +VKV
Sbjct: 74 KLRDKIPEIMDVEQIMDTETGLELNEENVEKALAEIRPYLAGTGGGVLELVQINDYVVKV 133
Query: 200 RITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
R++GPAAGVMTVRVA+TQKLRE IPAIAAVQL+
Sbjct: 134 RLSGPAAGVMTVRVALTQKLRETIPAIAAVQLI 166
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLISDGGNV-ALHEIDGNVVRLKLQGACGSCPSSVMTM 133
D+ L L EN+E L EIRPYL GG V L +I+ VV+++L G + VMT+
Sbjct: 90 DTETGLELNEENVEKALAEIRPYLAGTGGGVLELVQINDYVVKVRLSGPA----AGVMTV 145
Query: 134 KMGIERRLMEKIPEIVAVE 152
++ + ++L E IP I AV+
Sbjct: 146 RVALTQKLRETIPAIAAVQ 164
>gi|226503511|ref|NP_001150793.1| NFU3 [Zea mays]
gi|195641898|gb|ACG40417.1| NFU3 [Zea mays]
Length = 213
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/152 (73%), Positives = 130/152 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE
Sbjct: 60 LPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIET 119
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
RL +KIP+I+ VE + D ETGL+L +N++KVL+EIRPYL G GGSLEL+ ID +VK+
Sbjct: 120 RLRDKIPDILEVEQIVDTETGLDLTADNVDKVLDEIRPYLSGTGGGSLELLQIDGYVVKI 179
Query: 200 RITGPAAGVMTVRVAVTQKLREKIPAIAAVQL 231
RI GPAAGVMTVRVAVTQKLREKIP+I AVQL
Sbjct: 180 RIGGPAAGVMTVRVAVTQKLREKIPSILAVQL 211
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLI-SDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTM 133
D+ L LTA+N++ VLDEIRPYL + GG++ L +IDG VV++++ G + VMT+
Sbjct: 136 DTETGLDLTADNVDKVLDEIRPYLSGTGGGSLELLQIDGYVVKIRIGGPA----AGVMTV 191
Query: 134 KMGIERRLMEKIPEIVAVE 152
++ + ++L EKIP I+AV+
Sbjct: 192 RVAVTQKLREKIPSILAVQ 210
>gi|242094042|ref|XP_002437511.1| hypothetical protein SORBIDRAFT_10g028390 [Sorghum bicolor]
gi|241915734|gb|EER88878.1| hypothetical protein SORBIDRAFT_10g028390 [Sorghum bicolor]
Length = 240
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/152 (74%), Positives = 131/152 (86%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE
Sbjct: 87 LPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIET 146
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
RL +KIP+I+ VE + D ETGL+LN +N+EKVL+EIRPYL G GGSLE + ID +VK+
Sbjct: 147 RLRDKIPDILEVEQIVDTETGLDLNADNVEKVLDEIRPYLSGTGGGSLEQLQIDGYVVKI 206
Query: 200 RITGPAAGVMTVRVAVTQKLREKIPAIAAVQL 231
RI+GPAAGVMTVRVAVTQKLREKIP+I AVQL
Sbjct: 207 RISGPAAGVMTVRVAVTQKLREKIPSILAVQL 238
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLI-SDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTM 133
D+ L L A+N+E VLDEIRPYL + GG++ +IDG VV++++ G + VMT+
Sbjct: 163 DTETGLDLNADNVEKVLDEIRPYLSGTGGGSLEQLQIDGYVVKIRISGPA----AGVMTV 218
Query: 134 KMGIERRLMEKIPEIVAVE 152
++ + ++L EKIP I+AV+
Sbjct: 219 RVAVTQKLREKIPSILAVQ 237
>gi|413943265|gb|AFW75914.1| photosystemI1 [Zea mays]
Length = 266
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/152 (73%), Positives = 130/152 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE
Sbjct: 113 LPLTEENVEKVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIET 172
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
RL +KIP+I+ VE + D ETGL+L +N++KVL+EIRPYL G GGSLEL+ ID +VK+
Sbjct: 173 RLRDKIPDILEVEQIVDTETGLDLTADNVDKVLDEIRPYLSGTGGGSLELLQIDGYVVKI 232
Query: 200 RITGPAAGVMTVRVAVTQKLREKIPAIAAVQL 231
RI GPAAGVMTVRVAVTQKLREKIP+I AVQL
Sbjct: 233 RIGGPAAGVMTVRVAVTQKLREKIPSILAVQL 264
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLI-SDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTM 133
D+ L LTA+N++ VLDEIRPYL + GG++ L +IDG VV++++ G + VMT+
Sbjct: 189 DTETGLDLTADNVDKVLDEIRPYLSGTGGGSLELLQIDGYVVKIRIGGPA----AGVMTV 244
Query: 134 KMGIERRLMEKIPEIVAVE 152
++ + ++L EKIP I+AV+
Sbjct: 245 RVAVTQKLREKIPSILAVQ 263
>gi|326534082|dbj|BAJ89391.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/152 (75%), Positives = 130/152 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT EN+E VLDE+RP L+ DGGNVALHEIDG VV L LQGACGSCPSS MT+KMGIE
Sbjct: 63 LPLTEENVERVLDEVRPSLMRDGGNVALHEIDGLVVVLMLQGACGSCPSSTMTLKMGIES 122
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
RL +KIPEI+ VE + D ETGLELN EN+EKVL+EIRPYL G GGSL+LV ID +VK+
Sbjct: 123 RLRDKIPEILEVEQIHDTETGLELNTENVEKVLDEIRPYLSGTGGGSLDLVQIDGFVVKI 182
Query: 200 RITGPAAGVMTVRVAVTQKLREKIPAIAAVQL 231
+I+GPAAGVMTVRVAVTQKLREKIP+I AV+L
Sbjct: 183 QISGPAAGVMTVRVAVTQKLREKIPSILAVEL 214
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLI-SDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTM 133
D+ L L EN+E VLDEIRPYL + GG++ L +IDG VV++++ G + VMT+
Sbjct: 139 DTETGLELNTENVEKVLDEIRPYLSGTGGGSLDLVQIDGFVVKIQISGPA----AGVMTV 194
Query: 134 KMGIERRLMEKIPEIVAVE 152
++ + ++L EKIP I+AVE
Sbjct: 195 RVAVTQKLREKIPSILAVE 213
>gi|18416645|ref|NP_567735.1| NifU-like protein 3 [Arabidopsis thaliana]
gi|75147908|sp|Q84RQ7.1|NIFU3_ARATH RecName: Full=NifU-like protein 3, chloroplastic; Short=AtCNfu3;
Short=AtCnfU-IVa; Flags: Precursor
gi|28207820|emb|CAD55560.1| NFU3 protein [Arabidopsis thaliana]
gi|88196759|gb|ABD43022.1| At4g25910 [Arabidopsis thaliana]
gi|222423670|dbj|BAH19802.1| AT4G25910 [Arabidopsis thaliana]
gi|332659732|gb|AEE85132.1| NifU-like protein 3 [Arabidopsis thaliana]
Length = 236
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/154 (74%), Positives = 131/154 (85%), Gaps = 1/154 (0%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+PLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE
Sbjct: 82 MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIES 141
Query: 140 RLMEKIPEIVAVESVADEET-GLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVK 198
RL +KIPEI++VE + ET GLELN+ENIEKVL E+RPYL G GG LELV ID +VK
Sbjct: 142 RLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVK 201
Query: 199 VRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
VR+TGPAAGVMTVRVA+TQKLRE IP+I AVQLL
Sbjct: 202 VRLTGPAAGVMTVRVALTQKLRETIPSIGAVQLL 235
>gi|297803520|ref|XP_002869644.1| hypothetical protein ARALYDRAFT_492226 [Arabidopsis lyrata subsp.
lyrata]
gi|297315480|gb|EFH45903.1| hypothetical protein ARALYDRAFT_492226 [Arabidopsis lyrata subsp.
lyrata]
Length = 238
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/154 (74%), Positives = 131/154 (85%), Gaps = 1/154 (0%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+PLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE
Sbjct: 84 MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIES 143
Query: 140 RLMEKIPEIVAVESVADEET-GLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVK 198
RL +KIPEI++VE + ET GLELN+ENIEKVL E+RPYL G GG LELV ID IVK
Sbjct: 144 RLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYIVK 203
Query: 199 VRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
VR++GPAAGVMTVRVA+TQKLRE IP+I AVQLL
Sbjct: 204 VRLSGPAAGVMTVRVALTQKLRENIPSIGAVQLL 237
>gi|21554503|gb|AAM63593.1| nitrogen fixation like protein [Arabidopsis thaliana]
Length = 236
Score = 229 bits (585), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 115/154 (74%), Positives = 131/154 (85%), Gaps = 1/154 (0%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+PLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE
Sbjct: 82 MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIES 141
Query: 140 RLMEKIPEIVAVESVADEET-GLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVK 198
RL +KIPEI++VE + ET GLELN+ENIEKVL E+RPYL G GG LELV ID +VK
Sbjct: 142 RLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVK 201
Query: 199 VRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
VR+TGPAAGVMTVRVA+TQKLRE IP+I AVQLL
Sbjct: 202 VRLTGPAAGVMTVRVALTQKLRETIPSIGAVQLL 235
>gi|4538920|emb|CAB39656.1| nitrogen fixation like protein [Arabidopsis thaliana]
gi|7269442|emb|CAB79446.1| nitrogen fixation like protein [Arabidopsis thaliana]
Length = 224
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 115/154 (74%), Positives = 131/154 (85%), Gaps = 1/154 (0%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+PLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE
Sbjct: 70 MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIES 129
Query: 140 RLMEKIPEIVAVESVADEET-GLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVK 198
RL +KIPEI++VE + ET GLELN+ENIEKVL E+RPYL G GG LELV ID +VK
Sbjct: 130 RLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVK 189
Query: 199 VRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
VR+TGPAAGVMTVRVA+TQKLRE IP+I AVQLL
Sbjct: 190 VRLTGPAAGVMTVRVALTQKLRETIPSIGAVQLL 223
>gi|110738975|dbj|BAF01408.1| nitrogen fixation like protein [Arabidopsis thaliana]
gi|227206276|dbj|BAH57193.1| AT4G25910 [Arabidopsis thaliana]
Length = 155
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/154 (74%), Positives = 131/154 (85%), Gaps = 1/154 (0%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+PLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE
Sbjct: 1 MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIES 60
Query: 140 RLMEKIPEIVAVESVADEET-GLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVK 198
RL +KIPEI++VE + ET GLELN+ENIEKVL E+RPYL G GG LELV ID +VK
Sbjct: 61 RLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVK 120
Query: 199 VRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
VR+TGPAAGVMTVRVA+TQKLRE IP+I AVQLL
Sbjct: 121 VRLTGPAAGVMTVRVALTQKLRETIPSIGAVQLL 154
>gi|145351003|ref|XP_001419878.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580111|gb|ABO98171.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 213
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/152 (73%), Positives = 132/152 (86%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LTA+NIESVLDE+RPYLI+DGG+V L EIDG V+LKL+GACGSCPSS +TM+MGIE+
Sbjct: 60 LELTADNIESVLDEVRPYLIADGGDVELVEIDGLSVKLKLKGACGSCPSSTVTMRMGIEK 119
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
RL+EKIP+I+ V V ++ GL+LNEEN+E L+EIRPYL G GG LEL+ I+EPIVKV
Sbjct: 120 RLLEKIPDIMEVIQVEEKLEGLDLNEENVEATLDEIRPYLAGTGGGELELIDIEEPIVKV 179
Query: 200 RITGPAAGVMTVRVAVTQKLREKIPAIAAVQL 231
R+TGPAA VMTVRVAVTQKLREKIP+IAAVQL
Sbjct: 180 RLTGPAAKVMTVRVAVTQKLREKIPSIAAVQL 211
>gi|159474062|ref|XP_001695148.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158276082|gb|EDP01856.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 154
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 112/153 (73%), Positives = 127/153 (83%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E VLDE+RPYL++DGGNV EIDG VV+LKLQGACGSCPSS TM MGI+R
Sbjct: 2 MELTPENVEKVLDEVRPYLMADGGNVEFMEIDGLVVKLKLQGACGSCPSSTTTMTMGIKR 61
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
RLME+IPEI+ VE V +E GLELN +N+E VL EIRPYLVG GG LELV ID IVKV
Sbjct: 62 RLMERIPEILDVEQVTEESLGLELNSDNVETVLNEIRPYLVGTGGGGLELVAIDGVIVKV 121
Query: 200 RITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
+I+GPAA VMTVRVAVTQKLREKIP IAAVQL+
Sbjct: 122 KISGPAANVMTVRVAVTQKLREKIPGIAAVQLV 154
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLI-SDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTM 133
+ ++ L L ++N+E+VL+EIRPYL+ + GG + L IDG +V++K+ G ++VMT+
Sbjct: 78 EESLGLELNSDNVETVLNEIRPYLVGTGGGGLELVAIDGVIVKVKISGPA----ANVMTV 133
Query: 134 KMGIERRLMEKIPEIVAVESV 154
++ + ++L EKIP I AV+ V
Sbjct: 134 RVAVTQKLREKIPGIAAVQLV 154
>gi|218186519|gb|EEC68946.1| hypothetical protein OsI_37662 [Oryza sativa Indica Group]
Length = 221
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 120/168 (71%), Positives = 143/168 (85%), Gaps = 2/168 (1%)
Query: 67 VIKAVA--TPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACG 124
V+ A+A P +A++LPLTA N+ESVLD++RPYL +DGG+VALHEI GNVVRLKLQGACG
Sbjct: 53 VVGAIAGLDPVTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACG 112
Query: 125 SCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAG 184
SCPSS++T+K GIERRLMEKIP++ AVE V D+ETGLELNEEN+EKVL EIRPYL G G
Sbjct: 113 SCPSSLITIKRGIERRLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGG 172
Query: 185 GSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
G L+ + I PIVKVR+TGPAA V TVRVAV++KLREKIP+I VQLL
Sbjct: 173 GGLQFLMIKGPIVKVRLTGPAAVVRTVRVAVSKKLREKIPSIQIVQLL 220
>gi|308808272|ref|XP_003081446.1| NifU-like domain-containing proteins (ISS) [Ostreococcus tauri]
gi|116059909|emb|CAL55968.1| NifU-like domain-containing proteins (ISS) [Ostreococcus tauri]
Length = 203
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/161 (70%), Positives = 135/161 (83%), Gaps = 1/161 (0%)
Query: 73 TPDSAIE-LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVM 131
T D A++ L LTA+NIE VLDE+RPYLI+DGG+V L EIDG V+LKL+GACGSCPSS +
Sbjct: 42 TSDGALDTLELTADNIEKVLDEVRPYLIADGGDVELVEIDGLSVKLKLKGACGSCPSSTV 101
Query: 132 TMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVT 191
TM+MGIE+RL+EKIP+I+ V + DE GL L EEN+E+ L EIRPYL G GG LEL+
Sbjct: 102 TMRMGIEKRLLEKIPDIMEVIQIEDEIEGLPLTEENVEQTLNEIRPYLAGTGGGVLELLD 161
Query: 192 IDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
I+EPIVKVR+TGPAA VMTVRVAVTQKLREKIP+IAAVQL+
Sbjct: 162 IEEPIVKVRLTGPAAKVMTVRVAVTQKLREKIPSIAAVQLV 202
>gi|412992744|emb|CCO18724.1| NifU-like protein [Bathycoccus prasinos]
Length = 227
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 140/176 (79%), Gaps = 2/176 (1%)
Query: 59 KRGAARRNVIKAVATPDSAIE--LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVR 116
K+ ++ +A P S+I L LT +N+E VLDE+RPYLISDGGNV L EIDG VV+
Sbjct: 52 KKSSSSPTTTRAAGEPASSINETLELTGDNVEKVLDEVRPYLISDGGNVELVEIDGLVVK 111
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIR 176
L+LQGACGSCPSS +TM+MGIERRLMEKIPEI V + DEE GLEL EENIE L+EIR
Sbjct: 112 LRLQGACGSCPSSTVTMRMGIERRLMEKIPEIQEVMQLVDEEEGLELTEENIEATLDEIR 171
Query: 177 PYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
PYL G GG LELV +D PIVKV++TGPAA VMTVRVAVTQKLREKIP+IAAVQL+
Sbjct: 172 PYLAGTGGGELELVEVDAPIVKVKLTGPAAKVMTVRVAVTQKLREKIPSIAAVQLI 227
>gi|224126131|ref|XP_002329668.1| predicted protein [Populus trichocarpa]
gi|222870549|gb|EEF07680.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/145 (74%), Positives = 123/145 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT EN+E VLDE+RP L+ DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE
Sbjct: 5 LPLTEENVEKVLDEVRPGLMRDGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIET 64
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
+L +KIPEI+ VE + D ETGLELNEEN+EK L EIRPYL G GG LELV I++ +VKV
Sbjct: 65 KLRDKIPEIMDVEQIMDTETGLELNEENVEKALAEIRPYLAGTGGGVLELVQINDYVVKV 124
Query: 200 RITGPAAGVMTVRVAVTQKLREKIP 224
R++GPAAGVMTVRVA+TQKLRE IP
Sbjct: 125 RLSGPAAGVMTVRVALTQKLRETIP 149
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGV----MTVRVAVT 216
L L EEN+EKVL+E+RP L+ GG++ L ID +V +++ G MT+++ +
Sbjct: 5 LPLTEENVEKVLDEVRPGLM-RDGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIE 63
Query: 217 QKLREKIPAIAAVQ 230
KLR+KIP I V+
Sbjct: 64 TKLRDKIPEIMDVE 77
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLISDGGNV-ALHEIDGNVVRLKLQGACGSCPSSVMTM 133
D+ L L EN+E L EIRPYL GG V L +I+ VV+++L G + VMT+
Sbjct: 81 DTETGLELNEENVEKALAEIRPYLAGTGGGVLELVQINDYVVKVRLSGPA----AGVMTV 136
Query: 134 KMGIERRLMEKIP 146
++ + ++L E IP
Sbjct: 137 RVALTQKLRETIP 149
>gi|303290897|ref|XP_003064735.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453761|gb|EEH51069.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 153
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/153 (74%), Positives = 132/153 (86%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LTAEN+E VLDE+RPYLI+DGG+V L EIDG VVRLKL GACGSCPSS +TM+MGIER
Sbjct: 1 LELTAENVEKVLDEVRPYLIADGGDVELVEIDGLVVRLKLNGACGSCPSSTVTMRMGIER 60
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
RL+E IPEI+ VE V +EE GLELNE N+E L+EIRPYL G GG LELV I+EPIVK+
Sbjct: 61 RLLEVIPEIMEVEQVTEEEVGLELNEANVEATLDEIRPYLKGTGGGELELVDIEEPIVKI 120
Query: 200 RITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
+++GPAA VMTVRVAVTQKLREK+P+IAAVQLL
Sbjct: 121 KLSGPAASVMTVRVAVTQKLREKMPSIAAVQLL 153
>gi|357449363|ref|XP_003594958.1| NifU-like protein [Medicago truncatula]
gi|355484006|gb|AES65209.1| NifU-like protein [Medicago truncatula]
Length = 135
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 100/134 (74%), Positives = 118/134 (88%)
Query: 99 ISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEE 158
++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE RL +KIPEI+ VE + D E
Sbjct: 1 MADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQILDTE 60
Query: 159 TGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQK 218
TGLEL E+N+E VL EIRPYL+G GG+LELV I++ IVKVR++GPAAGVMTVRVA+TQK
Sbjct: 61 TGLELTEDNVESVLSEIRPYLIGTGGGTLELVEINDYIVKVRLSGPAAGVMTVRVALTQK 120
Query: 219 LREKIPAIAAVQLL 232
LR+KIP+IAAVQL+
Sbjct: 121 LRDKIPSIAAVQLI 134
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLI-SDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTM 133
D+ L LT +N+ESVL EIRPYLI + GG + L EI+ +V+++L G + VMT+
Sbjct: 58 DTETGLELTEDNVESVLSEIRPYLIGTGGGTLELVEINDYIVKVRLSGPA----AGVMTV 113
Query: 134 KMGIERRLMEKIPEIVAVESV 154
++ + ++L +KIP I AV+ +
Sbjct: 114 RVALTQKLRDKIPSIAAVQLI 134
>gi|302825922|ref|XP_002994529.1| hypothetical protein SELMODRAFT_48861 [Selaginella moellendorffii]
gi|300137483|gb|EFJ04406.1| hypothetical protein SELMODRAFT_48861 [Selaginella moellendorffii]
Length = 126
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/126 (77%), Positives = 108/126 (85%)
Query: 107 LHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEE 166
+ EIDG VV+LKLQGACGSCPSS+MTMKMGIE RL EKIPEI+ VE V D ETGLEL EE
Sbjct: 1 MEEIDGLVVKLKLQGACGSCPSSLMTMKMGIEARLKEKIPEIIGVEQVQDTETGLELTEE 60
Query: 167 NIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAI 226
N++K+L EIRPYLVG GG L LV ID P+VK+RI GPAAGVMTVRVAVTQKLREKIP I
Sbjct: 61 NVDKILSEIRPYLVGTGGGELTLVKIDGPVVKIRIEGPAAGVMTVRVAVTQKLREKIPMI 120
Query: 227 AAVQLL 232
AAVQL+
Sbjct: 121 AAVQLV 126
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 11/114 (9%)
Query: 48 CHSSCRLLLIRKRGAARR------NVIKAVATPDSAIELPLTAENIESVLDEIRPYLI-S 100
C S L+ K G R +I D+ L LT EN++ +L EIRPYL+ +
Sbjct: 17 CGSCPSSLMTMKMGIEARLKEKIPEIIGVEQVQDTETGLELTEENVDKILSEIRPYLVGT 76
Query: 101 DGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 154
GG + L +IDG VV+++++G + VMT+++ + ++L EKIP I AV+ V
Sbjct: 77 GGGELTLVKIDGPVVKIRIEGPA----AGVMTVRVAVTQKLREKIPMIAAVQLV 126
>gi|145334787|ref|NP_001078739.1| NifU-like protein 2 [Arabidopsis thaliana]
gi|222422967|dbj|BAH19468.1| AT5G49940 [Arabidopsis thaliana]
gi|332008491|gb|AED95874.1| NifU-like protein 2 [Arabidopsis thaliana]
Length = 185
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 128/175 (73%), Gaps = 5/175 (2%)
Query: 1 MQGVVLNPS-YSR-PHQTLDSPSCSRPASKSTKSFFGERVS--LTRWRNPVCHSSCRLLL 56
MQ + LNP+ SR P Q +D S S + +R + R NP+ R L
Sbjct: 1 MQLLTLNPAAISRTPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLS 60
Query: 57 IRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVR 116
R+ R V+KAVATPD +E+PLT EN+ESVLDEIRPYL+SDGGNVALHEIDGN+VR
Sbjct: 61 SRQL-FRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVR 119
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKV 171
+KLQGACGSCPSS MTMKMGIERRLMEKIPEIVAVE++ DEETGLELNEENIEKV
Sbjct: 120 VKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKV 174
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 7/88 (7%)
Query: 151 VESVADEETGLE--LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA--- 205
V++VA + LE L EEN+E VL+EIRPYL+ + GG++ L ID IV+V++ G
Sbjct: 71 VKAVATPDPILEVPLTEENVESVLDEIRPYLM-SDGGNVALHEIDGNIVRVKLQGACGSC 129
Query: 206 -AGVMTVRVAVTQKLREKIPAIAAVQLL 232
+ MT+++ + ++L EKIP I AV+ L
Sbjct: 130 PSSTMTMKMGIERRLMEKIPEIVAVEAL 157
>gi|413925508|gb|AFW65440.1| hypothetical protein ZEAMMB73_197216 [Zea mays]
Length = 184
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/107 (85%), Positives = 101/107 (94%)
Query: 65 RNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACG 124
R V++AVA PD AIELPLTAEN+E VLDE+RPYL++DGGNVALHEIDGNVVRLKLQGACG
Sbjct: 58 RQVVQAVANPDPAIELPLTAENVEMVLDEVRPYLMADGGNVALHEIDGNVVRLKLQGACG 117
Query: 125 SCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKV 171
SCP+SV TMKMGIERRLMEKIPEIVAVE +ADEETGLELN+ENIEKV
Sbjct: 118 SCPASVTTMKMGIERRLMEKIPEIVAVEPIADEETGLELNQENIEKV 164
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 57/86 (66%), Gaps = 7/86 (8%)
Query: 151 VESVADEETGLEL--NEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA--- 205
V++VA+ + +EL EN+E VL+E+RPYL+ A GG++ L ID +V++++ G
Sbjct: 61 VQAVANPDPAIELPLTAENVEMVLDEVRPYLM-ADGGNVALHEIDGNVVRLKLQGACGSC 119
Query: 206 -AGVMTVRVAVTQKLREKIPAIAAVQ 230
A V T+++ + ++L EKIP I AV+
Sbjct: 120 PASVTTMKMGIERRLMEKIPEIVAVE 145
>gi|307108673|gb|EFN56913.1| hypothetical protein CHLNCDRAFT_144603 [Chlorella variabilis]
Length = 149
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/153 (61%), Positives = 106/153 (69%), Gaps = 22/153 (14%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT EN+E+VLDE+RPYL++DGGNV EIDG VV L+L GACGSCPSS+ TM MGI+R
Sbjct: 18 LELTEENVETVLDEVRPYLMADGGNVEFVEIDGPVVYLRLAGACGSCPSSLTTMTMGIKR 77
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
RLME+IP PYLVG GG LELV +D PI KV
Sbjct: 78 RLMERIP----------------------LGGWSRAWPYLVGTGGGGLELVELDGPIAKV 115
Query: 200 RITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
RITGPAA VMTVRVAVTQKLRE+IPAIAAVQL+
Sbjct: 116 RITGPAANVMTVRVAVTQKLRERIPAIAAVQLV 148
>gi|388500200|gb|AFK38166.1| unknown [Medicago truncatula]
Length = 199
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 98/129 (75%), Gaps = 4/129 (3%)
Query: 56 LIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVV 115
LI +R A RN V +P LPLT EN+E VLDE+RP L++DGGNVALHEIDG VV
Sbjct: 69 LISRR--APRNKAGFVVSPRCV--LPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVV 124
Query: 116 RLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEI 175
LKLQGACGSCPSS MT+KMGIE RL +KIPEI+ VE + D ETGLEL E+N+E VL EI
Sbjct: 125 ILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQILDTETGLELTEDNVESVLSEI 184
Query: 176 RPYLVGAAG 184
RPYL+G G
Sbjct: 185 RPYLIGTGG 193
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EEN+EKVL+E+RP L+ A GG++ L ID +V +++ G + MT+++ +
Sbjct: 89 LPLTEENVEKVLDEVRPGLM-ADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIE 147
Query: 217 QKLREKIPAIAAVQ 230
+LR+KIP I V+
Sbjct: 148 TRLRDKIPEILEVE 161
>gi|449017164|dbj|BAM80566.1| similar to iron-sulfur cluster scaffold protein [Cyanidioschyzon
merolae strain 10D]
Length = 214
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 131/202 (64%), Gaps = 8/202 (3%)
Query: 33 FFGERVSLTRWRNPVCHSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLD 92
FFG + R C SC + AR + + V ++ L L+ ++E VLD
Sbjct: 13 FFGAASKSSPARRARCLRSCPTVRRPALQTARHDGVALVQMSATSEPLTLSEASVEVVLD 72
Query: 93 EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
E+RPYL++DGGNV++ EIDG VRLKL+GACGSCPSS MTMKMGIE+RL E+IPEI +V
Sbjct: 73 ELRPYLMADGGNVSIVEIDGATVRLKLEGACGSCPSSTMTMKMGIEKRLRERIPEIESV- 131
Query: 153 SVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDE-----PIVKVRITGPAAG 207
VA E+ G + + E +E+VL+++RP+L AGGS+ELV++ P+V +R+ G A
Sbjct: 132 -VAVEDAGEQPSSEGVEQVLDQVRPFL-KIAGGSIELVSMTNIDGPAPVVNLRLMGTGAA 189
Query: 208 VMTVRVAVTQKLREKIPAIAAV 229
+ +V+V ++ ++R + P IA +
Sbjct: 190 IQSVKVEISSRIRRRFPRIAQI 211
>gi|452819457|gb|EME26515.1| iron-sulfur cluster scaffold protein [Galdieria sulphuraria]
Length = 203
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 114/163 (69%), Gaps = 10/163 (6%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMK 134
DSA LPLT EN+E VL+E+RPYLI+DGGNV+L IDG VRL L+GACGSCPSS +T++
Sbjct: 44 DSA--LPLTKENVEQVLEELRPYLIADGGNVSLTGIDGATVRLTLEGACGSCPSSTVTLR 101
Query: 135 MGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTI-- 192
MGIE RL EKIPEI AV V +E G ELNE+NI+ VL+E+RP+L AGG ++LV I
Sbjct: 102 MGIETRLKEKIPEIEAV--VQEETMGPELNEQNIDSVLDEVRPFL-KIAGGKIDLVGIYG 158
Query: 193 ---DEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
P V ++++G A V +VR+ + +L+ P + V +
Sbjct: 159 TDSPSPSVSLKMSGGGAAVDSVRLEIIHRLKRNFPKLVNVHYV 201
>gi|428179555|gb|EKX48426.1| lysyl-tRNA synthetase [Guillardia theta CCMP2712]
Length = 639
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 110/150 (73%), Gaps = 9/150 (6%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT EN+E VLD +RPYL+SDGGNV + +IDG +VRLKL+GACG+CPSS MTMKMG+ER
Sbjct: 482 LPLTWENVEKVLDTMRPYLMSDGGNVKIADIDGGIVRLKLEGACGTCPSSTMTMKMGLER 541
Query: 140 RLMEKIPEIV-AVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID----- 193
L EKIPEIV V+ + D G EL+ +++EKVL+ +RP+L AGGS+EL +
Sbjct: 542 GLREKIPEIVDVVQDLGD--GGPELSPDSVEKVLDTVRPFL-KVAGGSIELFDLRGVGGM 598
Query: 194 EPIVKVRITGPAAGVMTVRVAVTQKLREKI 223
+P++ +++TG +A + +V+ + Q+L+
Sbjct: 599 QPVIILKMTGTSAALRSVKNEIVQRLQRNF 628
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 152 ESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AG 207
ES D + L L EN+EKVL+ +RPYL+ + GG++++ ID IV++++ G +
Sbjct: 473 ESPTDLDGPLPLTWENVEKVLDTMRPYLM-SDGGNVKIADIDGGIVRLKLEGACGTCPSS 531
Query: 208 VMTVRVAVTQKLREKIPAIAAV 229
MT+++ + + LREKIP I V
Sbjct: 532 TMTMKMGLERGLREKIPEIVDV 553
>gi|298708751|emb|CBJ30713.1| NifU-like protein 2, chloroplast precursor (AtCNfu2) (AtCnfU-V)
[Ectocarpus siliculosus]
Length = 276
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 111/149 (74%), Gaps = 8/149 (5%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT EN+E+VLDE+RPYL+SDGGNV + EIDG VVRL+L+GACGSCPSS MTMKMG+ER
Sbjct: 120 LTLTLENVETVLDEMRPYLMSDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTMKMGLER 179
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID-----E 194
RL+++IPEI E V G EL EN+EKVL+ +RP+L AGGS+ + ++ +
Sbjct: 180 RLVQRIPEI--SEVVQSIPNGPELTVENVEKVLDGVRPFL-SVAGGSINIQSLTGVSSIQ 236
Query: 195 PIVKVRITGPAAGVMTVRVAVTQKLREKI 223
P++ +++TG +A + ++R+ + Q+++ +
Sbjct: 237 PVITLKMTGSSASLKSIRMEIMQRIQREF 265
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Query: 156 DEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTV 211
D E L L EN+E VL+E+RPYL+ + GG++ +V ID P+V++ + G + MT+
Sbjct: 115 DPEALLTLTLENVETVLDEMRPYLM-SDGGNVRVVEIDGPVVRLELEGACGSCPSSTMTM 173
Query: 212 RVAVTQKLREKIPAIAAV 229
++ + ++L ++IP I+ V
Sbjct: 174 KMGLERRLVQRIPEISEV 191
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 48 CHSSCRLLLIRKRGAARRNVIKAVATPDSAIELP----LTAENIESVLDEIRPYLISDGG 103
C S + K G RR V + + +P LT EN+E VLD +RP+L GG
Sbjct: 163 CGSCPSSTMTMKMGLERRLVQRIPEISEVVQSIPNGPELTVENVEKVLDGVRPFLSVAGG 222
Query: 104 NVALHEIDG-----NVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
++ + + G V+ LK+ G+ S S M + I+R M
Sbjct: 223 SINIQSLTGVSSIQPVITLKMTGSSASLKSIRMEIMQRIQREFM 266
>gi|163310812|pdb|2JNV|A Chain A, Solution Structure Of C-Terminal Domain Of Nifu-Like
Protein From Oryza Sativa
Length = 91
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/83 (78%), Positives = 76/83 (91%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLTA N+ESVLD++RPYL +DGG+VALHEI GNVVRLKLQGACGSCPSS++T+K GIER
Sbjct: 3 LPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIER 62
Query: 140 RLMEKIPEIVAVESVADEETGLE 162
RLMEKIP++ AVE V D+ETGLE
Sbjct: 63 RLMEKIPDVAAVEPVTDKETGLE 85
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 160 GLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAV 215
GL L N+E VL+++RPYL A GG + L I +V++++ G + ++T++ +
Sbjct: 2 GLPLTAGNVESVLDQVRPYLT-ADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGI 60
Query: 216 TQKLREKIPAIAAVQ 230
++L EKIP +AAV+
Sbjct: 61 ERRLMEKIPDVAAVE 75
>gi|397620240|gb|EJK65619.1| hypothetical protein THAOC_13500 [Thalassiosira oceanica]
Length = 227
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 106/150 (70%), Gaps = 10/150 (6%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT +N++ VLDE+RPYL+ DGGNVA+ EIDG VVRL+LQG CG+CPSS TMKMG+ER
Sbjct: 72 LDLTWDNVDMVLDEMRPYLLQDGGNVAISEIDGPVVRLELQGECGTCPSSTQTMKMGLER 131
Query: 140 RLMEKIPEIV-AVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID----- 193
+LME+IPEI V+++ D +L E+ I VL+ +RP+L AGG++++ +I
Sbjct: 132 KLMERIPEIQEVVQALPDSP---DLTEDQINVVLDSVRPFL-SVAGGTIDIDSISGEGGL 187
Query: 194 EPIVKVRITGPAAGVMTVRVAVTQKLREKI 223
+P + +++ G AA + +V++ + Q+L+
Sbjct: 188 QPTITLKMDGSAASLNSVKLEIAQRLQRHF 217
>gi|219120702|ref|XP_002181084.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407800|gb|EEC47736.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 225
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 101/145 (69%), Gaps = 8/145 (5%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT +N+E+VLDE+RPYLI DGGNV + +IDG VV+L+LQGACG+CPSS TMKMG+ER
Sbjct: 69 LDLTWDNVEAVLDEMRPYLIQDGGNVIISDIDGPVVKLELQGACGTCPSSTQTMKMGLER 128
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID-----E 194
L EKIPEI V E G EL E ++ VL+ +RP+L AGGS+ + ID +
Sbjct: 129 GLREKIPEIQEVIQAMPE--GPELTSEQVDVVLDGVRPFL-QVAGGSINMDRIDGVDGLQ 185
Query: 195 PIVKVRITGPAAGVMTVRVAVTQKL 219
P + +++ G +A + +V++ + Q+L
Sbjct: 186 PTIWLKMEGSSASLNSVKLEIAQRL 210
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L+L +N+E VL+E+RPYL+ GG++ + ID P+VK+ + G + T+++ +
Sbjct: 69 LDLTWDNVEAVLDEMRPYLI-QDGGNVIISDIDGPVVKLELQGACGTCPSSTQTMKMGLE 127
Query: 217 QKLREKIPAIAAV 229
+ LREKIP I V
Sbjct: 128 RGLREKIPEIQEV 140
>gi|223993177|ref|XP_002286272.1| nifU like protein [Thalassiosira pseudonana CCMP1335]
gi|220977587|gb|EED95913.1| nifU like protein [Thalassiosira pseudonana CCMP1335]
Length = 237
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 107/150 (71%), Gaps = 10/150 (6%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT EN++ VL+E+RP+L+ DGGNVA+ EIDG +V+L+LQGACG+CPSS TMKMG+ER
Sbjct: 82 LDLTWENVDMVLEEMRPFLLQDGGNVAISEIDGPIVKLELQGACGTCPSSTQTMKMGLER 141
Query: 140 RLMEKIPEIVAV-ESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID----- 193
+L E+IPEI V +++ D +LNE+ I VL+ +RP+L AGG++++ +I
Sbjct: 142 KLRERIPEIQEVIQALPDTP---DLNEDQINIVLDSVRPFLQ-VAGGTIDVASITGEGGL 197
Query: 194 EPIVKVRITGPAAGVMTVRVAVTQKLREKI 223
+P + +++ G AA + +V++ + Q+L+
Sbjct: 198 QPTITLKMGGSAASLNSVKLEIAQRLQRHF 227
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 153 SVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGV 208
S+ ++ L+L EN++ VLEE+RP+L+ GG++ + ID PIVK+ + G +
Sbjct: 74 SLGSDDEPLDLTWENVDMVLEEMRPFLL-QDGGNVAISEIDGPIVKLELQGACGTCPSST 132
Query: 209 MTVRVAVTQKLREKIPAIAAV 229
T+++ + +KLRE+IP I V
Sbjct: 133 QTMKMGLERKLRERIPEIQEV 153
>gi|255546045|ref|XP_002514082.1| hypothetical protein RCOM_1046230 [Ricinus communis]
gi|223546538|gb|EEF48036.1| hypothetical protein RCOM_1046230 [Ricinus communis]
Length = 85
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 73/84 (86%)
Query: 149 VAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGV 208
+AVE + D ETGLELN+EN+EKVL EIRPYL G GG LELV ID+ +VKVR++ PAAGV
Sbjct: 1 MAVEQILDTETGLELNDENVEKVLAEIRPYLAGTGGGVLELVQIDDYVVKVRLSRPAAGV 60
Query: 209 MTVRVAVTQKLREKIPAIAAVQLL 232
MTVRVA+TQKLR+KIPAIAAVQL+
Sbjct: 61 MTVRVALTQKLRDKIPAIAAVQLI 84
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 7/82 (8%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLISDGGNV-ALHEIDGNVVRLKLQGACGSCPSS-VMT 132
D+ L L EN+E VL EIRPYL GG V L +ID VV+++L S P++ VMT
Sbjct: 8 DTETGLELNDENVEKVLAEIRPYLAGTGGGVLELVQIDDYVVKVRL-----SRPAAGVMT 62
Query: 133 MKMGIERRLMEKIPEIVAVESV 154
+++ + ++L +KIP I AV+ +
Sbjct: 63 VRVALTQKLRDKIPAIAAVQLI 84
>gi|323453984|gb|EGB09855.1| hypothetical protein AURANDRAFT_6483, partial [Aureococcus
anophagefferens]
Length = 114
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 90/115 (78%), Gaps = 5/115 (4%)
Query: 79 ELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 138
+ PLT EN+E +LDE+RPYL+SDGGNV + I+G VV+L+L+GACG+CPSS MTMKMG+E
Sbjct: 2 QFPLTWENVELILDELRPYLMSDGGNVRIAGIEGPVVKLELEGACGTCPSSTMTMKMGLE 61
Query: 139 RRLMEKIPEIV-AVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTI 192
RRL E IPEI V+ + D +++E ++++VLE +RP+L AGG+++LV++
Sbjct: 62 RRLKEAIPEISDVVQYLPDTP---DMDEASVDEVLEGVRPFL-SVAGGTVDLVSL 112
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQK 218
L EN+E +L+E+RPYL+ + GG++ + I+ P+VK+ + G + MT+++ + ++
Sbjct: 5 LTWENVELILDELRPYLM-SDGGNVRIAGIEGPVVKLELEGACGTCPSSTMTMKMGLERR 63
Query: 219 LREKIPAIAAV 229
L+E IP I+ V
Sbjct: 64 LKEAIPEISDV 74
>gi|443327268|ref|ZP_21055897.1| thioredoxin-like protein [Xenococcus sp. PCC 7305]
gi|442793136|gb|ELS02594.1| thioredoxin-like protein [Xenococcus sp. PCC 7305]
Length = 78
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/75 (76%), Positives = 66/75 (88%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT +N+E+VLDE+RPYL+SDGGNV L EI+G +V+LKLQGACGSCPSS MT+KMGIER
Sbjct: 3 LALTTDNVETVLDELRPYLMSDGGNVDLVEIEGPIVKLKLQGACGSCPSSAMTLKMGIER 62
Query: 140 RLMEKIPEIVAVESV 154
RL EKIPEIV VE V
Sbjct: 63 RLREKIPEIVEVEQV 77
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L +N+E VL+E+RPYL+ + GG+++LV I+ PIVK+++ G + MT+++ +
Sbjct: 3 LALTTDNVETVLDELRPYLM-SDGGNVDLVEIEGPIVKLKLQGACGSCPSSAMTLKMGIE 61
Query: 217 QKLREKIPAIAAVQ 230
++LREKIP I V+
Sbjct: 62 RRLREKIPEIVEVE 75
>gi|409993648|ref|ZP_11276782.1| nitrogen-fixing NifU domain-containing protein [Arthrospira
platensis str. Paraca]
gi|291566311|dbj|BAI88583.1| iron-sulfur cluster assembly factor [Arthrospira platensis NIES-39]
gi|409935493|gb|EKN77023.1| nitrogen-fixing NifU domain-containing protein [Arthrospira
platensis str. Paraca]
Length = 79
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 66/75 (88%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT EN+E+VLDE+RPYL++DGGNV + E+DG +VRL+LQGACGSCPSS MT+KMGIER
Sbjct: 4 LALTPENVETVLDELRPYLMADGGNVEIVELDGPIVRLRLQGACGSCPSSTMTLKMGIER 63
Query: 140 RLMEKIPEIVAVESV 154
RL EKIPEI VESV
Sbjct: 64 RLREKIPEIAEVESV 78
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 54/76 (71%), Gaps = 5/76 (6%)
Query: 159 TGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVA 214
T L L EN+E VL+E+RPYL+ A GG++E+V +D PIV++R+ G + MT+++
Sbjct: 2 TTLALTPENVETVLDELRPYLM-ADGGNVEIVELDGPIVRLRLQGACGSCPSSTMTLKMG 60
Query: 215 VTQKLREKIPAIAAVQ 230
+ ++LREKIP IA V+
Sbjct: 61 IERRLREKIPEIAEVE 76
>gi|218438992|ref|YP_002377321.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
7424]
gi|218171720|gb|ACK70453.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7424]
Length = 81
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 63/74 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT EN+E VLDE+RPYL++DGGNV L EIDG +V+L+LQGACGSCPSS MT+KMGIER
Sbjct: 6 LPLTTENVEQVLDELRPYLMADGGNVELVEIDGPIVKLRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAVES 153
RL E IPEI VE
Sbjct: 66 RLREYIPEIAEVEQ 79
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EN+E+VL+E+RPYL+ A GG++ELV ID PIVK+R+ G + MT+++ +
Sbjct: 6 LPLTTENVEQVLDELRPYLM-ADGGNVELVEIDGPIVKLRLQGACGSCPSSTMTLKMGIE 64
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 65 RRLREYIPEIAEVE 78
>gi|254415273|ref|ZP_05029035.1| hypothetical protein MC7420_2699 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196178079|gb|EDX73081.1| hypothetical protein MC7420_2699 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 84
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 66/75 (88%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT+EN+E+VLDE+RPYL++DGGNV L EIDG +V+L+LQGACGSCPSS MT+KMGIER
Sbjct: 9 LALTSENVEAVLDELRPYLMADGGNVDLVEIDGPIVKLRLQGACGSCPSSAMTLKMGIER 68
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEIV VE V
Sbjct: 69 RLREFIPEIVEVEQV 83
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EN+E VL+E+RPYL+ A GG+++LV ID PIVK+R+ G + MT+++ +
Sbjct: 9 LALTSENVEAVLDELRPYLM-ADGGNVDLVEIDGPIVKLRLQGACGSCPSSAMTLKMGIE 67
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP I V+
Sbjct: 68 RRLREFIPEIVEVE 81
>gi|209523451|ref|ZP_03272006.1| nitrogen-fixing NifU domain protein [Arthrospira maxima CS-328]
gi|376006464|ref|ZP_09783734.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|423064651|ref|ZP_17053441.1| nitrogen-fixing NifU domain protein [Arthrospira platensis C1]
gi|209496193|gb|EDZ96493.1| nitrogen-fixing NifU domain protein [Arthrospira maxima CS-328]
gi|375325168|emb|CCE19487.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|406713894|gb|EKD09062.1| nitrogen-fixing NifU domain protein [Arthrospira platensis C1]
Length = 79
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 66/75 (88%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT EN+E+VLDE+RPYL++DGGNV + E+DG +VRL+LQGACGSCPSS MT+KMGIER
Sbjct: 4 LALTPENVETVLDELRPYLMADGGNVEVVELDGPIVRLRLQGACGSCPSSTMTLKMGIER 63
Query: 140 RLMEKIPEIVAVESV 154
RL E+IPEI VESV
Sbjct: 64 RLRERIPEIAEVESV 78
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 54/76 (71%), Gaps = 5/76 (6%)
Query: 159 TGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVA 214
T L L EN+E VL+E+RPYL+ A GG++E+V +D PIV++R+ G + MT+++
Sbjct: 2 TTLALTPENVETVLDELRPYLM-ADGGNVEVVELDGPIVRLRLQGACGSCPSSTMTLKMG 60
Query: 215 VTQKLREKIPAIAAVQ 230
+ ++LRE+IP IA V+
Sbjct: 61 IERRLRERIPEIAEVE 76
>gi|307153189|ref|YP_003888573.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
7822]
gi|306983417|gb|ADN15298.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7822]
Length = 78
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 66/75 (88%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT++N+E+VLDE+RPYL++DGGNV L EIDG +V+L+LQGACGSCPSS MT+KMGIER
Sbjct: 3 LALTSDNVETVLDEMRPYLMADGGNVELVEIDGPIVKLRLQGACGSCPSSTMTLKMGIER 62
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEIV VE V
Sbjct: 63 RLREYIPEIVEVEQV 77
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L +N+E VL+E+RPYL+ A GG++ELV ID PIVK+R+ G + MT+++ +
Sbjct: 3 LALTSDNVETVLDEMRPYLM-ADGGNVELVEIDGPIVKLRLQGACGSCPSSTMTLKMGIE 61
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP I V+
Sbjct: 62 RRLREYIPEIVEVE 75
>gi|119493943|ref|ZP_01624504.1| putative NifU-like protein [Lyngbya sp. PCC 8106]
gi|119452300|gb|EAW33495.1| putative NifU-like protein [Lyngbya sp. PCC 8106]
Length = 79
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 67/77 (87%)
Query: 79 ELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 138
+L LT EN+E+VLDE+RPYL++DGGNV + E+DG +VRL+LQGACGSCPSS MT+KMGIE
Sbjct: 3 DLALTPENVETVLDELRPYLMADGGNVEIVELDGPIVRLRLQGACGSCPSSTMTLKMGIE 62
Query: 139 RRLMEKIPEIVAVESVA 155
RRL EKIPEI V +VA
Sbjct: 63 RRLREKIPEIAEVVAVA 79
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 53/75 (70%), Gaps = 5/75 (6%)
Query: 159 TGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVA 214
T L L EN+E VL+E+RPYL+ A GG++E+V +D PIV++R+ G + MT+++
Sbjct: 2 TDLALTPENVETVLDELRPYLM-ADGGNVEIVELDGPIVRLRLQGACGSCPSSTMTLKMG 60
Query: 215 VTQKLREKIPAIAAV 229
+ ++LREKIP IA V
Sbjct: 61 IERRLREKIPEIAEV 75
>gi|428304593|ref|YP_007141418.1| nitrogen-fixing NifU domain-containing protein [Crinalium
epipsammum PCC 9333]
gi|428246128|gb|AFZ11908.1| nitrogen-fixing NifU domain-containing protein [Crinalium
epipsammum PCC 9333]
Length = 82
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E VLD++RPYL+SDGGNV L EI+G +V+L+LQGACGSCPSS MT+KMGIER
Sbjct: 7 MELTTENVEKVLDDLRPYLMSDGGNVELVEIEGPIVKLRLQGACGSCPSSAMTLKMGIER 66
Query: 140 RLMEKIPEIVAVESV 154
RLME IPEI +E V
Sbjct: 67 RLMEFIPEIAEIEQV 81
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL EN+EKVL+++RPYL+ + GG++ELV I+ PIVK+R+ G + MT+++ +
Sbjct: 7 MELTTENVEKVLDDLRPYLM-SDGGNVELVEIEGPIVKLRLQGACGSCPSSAMTLKMGIE 65
Query: 217 QKLREKIPAIAAVQ 230
++L E IP IA ++
Sbjct: 66 RRLMEFIPEIAEIE 79
>gi|334118117|ref|ZP_08492207.1| nitrogen-fixing NifU domain-containing protein [Microcoleus
vaginatus FGP-2]
gi|428317713|ref|YP_007115595.1| nitrogen-fixing NifU domain-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|333460102|gb|EGK88712.1| nitrogen-fixing NifU domain-containing protein [Microcoleus
vaginatus FGP-2]
gi|428241393|gb|AFZ07179.1| nitrogen-fixing NifU domain-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 78
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 63/75 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT +N+E+VLDE+RPYLISDGGNV L EIDG VV L+LQGACGSCPSS MT++MGIER
Sbjct: 3 LALTRDNVETVLDEMRPYLISDGGNVELVEIDGPVVHLRLQGACGSCPSSTMTLRMGIER 62
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 63 RLREAIPEIAEVEQV 77
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L +N+E VL+E+RPYL+ + GG++ELV ID P+V +R+ G + MT+R+ +
Sbjct: 3 LALTRDNVETVLDEMRPYLI-SDGGNVELVEIDGPVVHLRLQGACGSCPSSTMTLRMGIE 61
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 62 RRLREAIPEIAEVE 75
>gi|354567091|ref|ZP_08986261.1| nitrogen-fixing NifU domain-containing protein [Fischerella sp.
JSC-11]
gi|353543392|gb|EHC12850.1| nitrogen-fixing NifU domain-containing protein [Fischerella sp.
JSC-11]
Length = 76
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 65/75 (86%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LTA+N+E+VLDE+RPYL+SDGGNV L E+DG +V+L+LQGACGSCPSS MT++MGIER
Sbjct: 1 MELTADNVETVLDEMRPYLMSDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 61 RLKEMIPEIAEVEQV 75
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL +N+E VL+E+RPYL+ + GG++ELV +D PIVK+R+ G + MT+R+ +
Sbjct: 1 MELTADNVETVLDEMRPYLM-SDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
++L+E IP IA V+
Sbjct: 60 RRLKEMIPEIAEVE 73
>gi|357112515|ref|XP_003558054.1| PREDICTED: nifU-like protein 1, chloroplastic-like isoform 1
[Brachypodium distachyon]
gi|357112517|ref|XP_003558055.1| PREDICTED: nifU-like protein 1, chloroplastic-like isoform 2
[Brachypodium distachyon]
Length = 222
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 110/199 (55%), Gaps = 19/199 (9%)
Query: 40 LTRWRNPVCHSSCRLLLIRKRGAARRNVIKAVATPDS-------AIELPLTAENIESVLD 92
L WR+ S IR G R + +TP + A LTA+N++ VLD
Sbjct: 30 LPLWRHHFGASK-----IRTAGFRRHRAAASSSTPPTPGGGLYEAATYELTADNVDRVLD 84
Query: 93 EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPE-IVAV 151
++RPYLI+DGG+VA+ ++ VV L+L+GACGSCPSS TMKMGIER L EK + I+ +
Sbjct: 85 DVRPYLIADGGDVAVVSVEDGVVSLRLEGACGSCPSSTTTMKMGIERVLNEKFGDAIMEI 144
Query: 152 ESVAD-EETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMT 210
V D +++ E E + + L+ +RP + GGS+E++ +D V+ GP +
Sbjct: 145 RQVFDGDQSPAETTPEAVNRHLDILRP-AIANYGGSVEVLAVDGEDCLVKYDGPE----S 199
Query: 211 VRVAVTQKLREKIPAIAAV 229
+ V ++EK P I V
Sbjct: 200 IGSGVKAAIKEKFPDITNV 218
>gi|440682790|ref|YP_007157585.1| nitrogen-fixing NifU domain-containing protein [Anabaena cylindrica
PCC 7122]
gi|428679909|gb|AFZ58675.1| nitrogen-fixing NifU domain-containing protein [Anabaena cylindrica
PCC 7122]
Length = 79
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT EN+E+VLDE+RPYL+SDGGNV L E+DG +V+L+LQGACGSCPSS MT++MGIER
Sbjct: 4 LELTTENVETVLDELRPYLMSDGGNVELVELDGPIVKLRLQGACGSCPSSAMTLRMGIER 63
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI +E V
Sbjct: 64 RLKEMIPEISEIEQV 78
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
LEL EN+E VL+E+RPYL+ + GG++ELV +D PIVK+R+ G + MT+R+ +
Sbjct: 4 LELTTENVETVLDELRPYLM-SDGGNVELVELDGPIVKLRLQGACGSCPSSAMTLRMGIE 62
Query: 217 QKLREKIPAIAAVQ 230
++L+E IP I+ ++
Sbjct: 63 RRLKEMIPEISEIE 76
>gi|428301489|ref|YP_007139795.1| nitrogen-fixing NifU domain-containing protein [Calothrix sp. PCC
6303]
gi|428238033|gb|AFZ03823.1| nitrogen-fixing NifU domain-containing protein [Calothrix sp. PCC
6303]
Length = 85
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 66/82 (80%)
Query: 73 TPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMT 132
TP + + LT +N+E VLDE+RPYL+SDGGNV L E+DG +V+L+LQGACG+CPSS MT
Sbjct: 3 TPKNLKTMELTTDNVEQVLDEMRPYLMSDGGNVELVELDGPIVKLRLQGACGTCPSSAMT 62
Query: 133 MKMGIERRLMEKIPEIVAVESV 154
++MGIERRL E IPEI VE V
Sbjct: 63 LRMGIERRLREMIPEIAEVEQV 84
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 54/74 (72%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL +N+E+VL+E+RPYL+ + GG++ELV +D PIVK+R+ G + MT+R+ +
Sbjct: 10 MELTTDNVEQVLDEMRPYLM-SDGGNVELVELDGPIVKLRLQGACGTCPSSAMTLRMGIE 68
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 69 RRLREMIPEIAEVE 82
>gi|411119169|ref|ZP_11391549.1| thioredoxin-like protein [Oscillatoriales cyanobacterium JSC-12]
gi|410711032|gb|EKQ68539.1| thioredoxin-like protein [Oscillatoriales cyanobacterium JSC-12]
Length = 80
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT EN+E+VLDE+RPYL++DGGNV L EIDG +V+L+LQGACGSCPSS MT++MGIER
Sbjct: 5 LTLTPENVETVLDEMRPYLMADGGNVELVEIDGPIVKLRLQGACGSCPSSTMTLRMGIER 64
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 65 RLREFIPEIAEVEQV 79
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EN+E VL+E+RPYL+ A GG++ELV ID PIVK+R+ G + MT+R+ +
Sbjct: 5 LTLTPENVETVLDEMRPYLM-ADGGNVELVEIDGPIVKLRLQGACGSCPSSTMTLRMGIE 63
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 64 RRLREFIPEIAEVE 77
>gi|428205137|ref|YP_007089490.1| nitrogen-fixing NifU domain-containing protein [Chroococcidiopsis
thermalis PCC 7203]
gi|428007058|gb|AFY85621.1| nitrogen-fixing NifU domain protein [Chroococcidiopsis thermalis
PCC 7203]
Length = 76
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT +N+E+VLDE+RPYL+SDGGNV L E+DG +VRL+LQGACGSCPSS MT++MGIER
Sbjct: 1 MELTTDNVETVLDEMRPYLMSDGGNVELVELDGPIVRLRLQGACGSCPSSTMTLRMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 61 RLREMIPEIAEVEQV 75
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL +N+E VL+E+RPYL+ + GG++ELV +D PIV++R+ G + MT+R+ +
Sbjct: 1 MELTTDNVETVLDEMRPYLM-SDGGNVELVELDGPIVRLRLQGACGSCPSSTMTLRMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 60 RRLREMIPEIAEVE 73
>gi|300867628|ref|ZP_07112276.1| nitrogen-fixing NifU-like [Oscillatoria sp. PCC 6506]
gi|300334389|emb|CBN57446.1| nitrogen-fixing NifU-like [Oscillatoria sp. PCC 6506]
Length = 79
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/75 (73%), Positives = 63/75 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT EN+E VLDE+RPYL+SDGGNV L EI+G VV+L+LQGACGSCPSS MT++MGIER
Sbjct: 4 LALTRENVEQVLDELRPYLMSDGGNVELVEIEGPVVQLRLQGACGSCPSSAMTLRMGIER 63
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 64 RLRETIPEIAEVEQV 78
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 54/76 (71%), Gaps = 5/76 (6%)
Query: 159 TGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVA 214
T L L EN+E+VL+E+RPYL+ + GG++ELV I+ P+V++R+ G + MT+R+
Sbjct: 2 TTLALTRENVEQVLDELRPYLM-SDGGNVELVEIEGPVVQLRLQGACGSCPSSAMTLRMG 60
Query: 215 VTQKLREKIPAIAAVQ 230
+ ++LRE IP IA V+
Sbjct: 61 IERRLRETIPEIAEVE 76
>gi|428774789|ref|YP_007166576.1| nitrogen-fixing NifU domain-containing protein [Halothece sp. PCC
7418]
gi|428689068|gb|AFZ42362.1| nitrogen-fixing NifU domain protein [Halothece sp. PCC 7418]
Length = 82
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 64/76 (84%)
Query: 79 ELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 138
+L LT EN+E VLDE+RPYL++DGGNV L EI+G +V+LKLQGACGSCPSS MT+KMGIE
Sbjct: 5 KLALTPENVEKVLDELRPYLMADGGNVDLVEIEGPIVKLKLQGACGSCPSSAMTLKMGIE 64
Query: 139 RRLMEKIPEIVAVESV 154
RRL E IPEI VE V
Sbjct: 65 RRLREFIPEIAEVEQV 80
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
Query: 158 ETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRV 213
+T L L EN+EKVL+E+RPYL+ A GG+++LV I+ PIVK+++ G + MT+++
Sbjct: 3 DTKLALTPENVEKVLDELRPYLM-ADGGNVDLVEIEGPIVKLKLQGACGSCPSSAMTLKM 61
Query: 214 AVTQKLREKIPAIAAVQ 230
+ ++LRE IP IA V+
Sbjct: 62 GIERRLREFIPEIAEVE 78
>gi|33860975|ref|NP_892536.1| NifU-like protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
gi|33639707|emb|CAE18877.1| NifU-like protein [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 81
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT EN+E+VLDE+RP+LISDGGNV + EIDG +V+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 LPLTNENVETVLDELRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAVESV 154
+L E IPEI V V
Sbjct: 66 KLKEMIPEISEVVQV 80
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EN+E VL+E+RP+L+ + GG++E+ ID PIVKVR+ G + MT+++ +
Sbjct: 6 LPLTNENVETVLDELRPFLI-SDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMGIE 64
Query: 217 QKLREKIPAIAAV 229
+KL+E IP I+ V
Sbjct: 65 RKLKEMIPEISEV 77
>gi|225437626|ref|XP_002278510.1| PREDICTED: nifU-like protein 1, chloroplastic [Vitis vinifera]
gi|297744011|emb|CBI36981.3| unnamed protein product [Vitis vinifera]
Length = 213
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 98/155 (63%), Gaps = 7/155 (4%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA + LTA+N++ VL+++RPYLISDGGNV + ++ V+ LKLQGACGSCPSS TM M
Sbjct: 61 SAHKFELTAKNVDLVLEDVRPYLISDGGNVDVVSVEDGVISLKLQGACGSCPSSTTTMTM 120
Query: 136 GIERRLMEKIPEIVA-VESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDE 194
GIER L EK + V + V DE+TG E E + + L+ +RP + G S+++++I+
Sbjct: 121 GIERVLKEKFGDAVKDIRQVYDEQTG-ETTVEAVNRHLDILRP-AIKNYGSSVDVLSIEG 178
Query: 195 PIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAV 229
V+ TGP + ++ A+ +EK P I V
Sbjct: 179 GDCLVKYTGPESIGSGIKAAI----KEKFPDIVNV 209
>gi|224064633|ref|XP_002301529.1| predicted protein [Populus trichocarpa]
gi|222843255|gb|EEE80802.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 114/196 (58%), Gaps = 22/196 (11%)
Query: 50 SSCRLLLIRKR----GAARR----NVIKAVA-----TPD--SAIELPLTAENIESVLDEI 94
+S + L I++R G RR IKA A +P SA + L +N++ VL+E+
Sbjct: 23 NSPQSLTIKQRTLLPGTGRRIFHKTAIKATAPTGSSSPGLYSAQQFELNPQNVDLVLEEV 82
Query: 95 RPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPE-IVAVES 153
RPYLI+DGGNV + ++ V+ LKLQGACG CPSS TMKMGIER L EK + I +
Sbjct: 83 RPYLIADGGNVDVVSVEDGVISLKLQGACGDCPSSTTTMKMGIERVLKEKFGDAIKDIRQ 142
Query: 154 VADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRV 213
V+DEE+ E E + L+ +RP + GGS+E+++++ +V+ TGP + ++
Sbjct: 143 VSDEESK-ETTVERVNGHLDILRPAITN-FGGSVEVLSVENGECRVQYTGPESIASGIKA 200
Query: 214 AVTQKLREKIPAIAAV 229
A+ +EK P I V
Sbjct: 201 AI----KEKFPDIVDV 212
>gi|427708116|ref|YP_007050493.1| nitrogen-fixing NifU domain-containing protein [Nostoc sp. PCC
7107]
gi|427360621|gb|AFY43343.1| nitrogen-fixing NifU domain-containing protein [Nostoc sp. PCC
7107]
Length = 76
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT +N+E+VLDE+RPYLISDGGNV + E+DG VVRL+LQGACGSCPSS MT++MGIER
Sbjct: 1 MELTLDNVETVLDEMRPYLISDGGNVEVVELDGPVVRLRLQGACGSCPSSTMTLRMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 61 RLREMIPEIAEVEQV 75
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL +N+E VL+E+RPYL+ + GG++E+V +D P+V++R+ G + MT+R+ +
Sbjct: 1 MELTLDNVETVLDEMRPYLI-SDGGNVEVVELDGPVVRLRLQGACGSCPSSTMTLRMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 60 RRLREMIPEIAEVE 73
>gi|443314802|ref|ZP_21044333.1| thioredoxin-like protein [Leptolyngbya sp. PCC 6406]
gi|442785597|gb|ELR95406.1| thioredoxin-like protein [Leptolyngbya sp. PCC 6406]
Length = 79
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 63/75 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E VLDE+RPYL++DGGNV L E+DG VVRL+LQGACGSCPSS MT++MGIER
Sbjct: 4 MALTDENVEKVLDEMRPYLMADGGNVELVELDGPVVRLRLQGACGSCPSSAMTLRMGIER 63
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 64 RLREFIPEIAEVEQV 78
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 54/74 (72%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+ L +EN+EKVL+E+RPYL+ A GG++ELV +D P+V++R+ G + MT+R+ +
Sbjct: 4 MALTDENVEKVLDEMRPYLM-ADGGNVELVELDGPVVRLRLQGACGSCPSSAMTLRMGIE 62
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 63 RRLREFIPEIAEVE 76
>gi|119511776|ref|ZP_01630878.1| Nitrogen-fixing NifU-like protein [Nodularia spumigena CCY9414]
gi|119463549|gb|EAW44484.1| Nitrogen-fixing NifU-like protein [Nodularia spumigena CCY9414]
Length = 76
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E+VLDE+RPYL+SDGGNV L E+DG +V+L+LQGACGSCPSS MT++MGIER
Sbjct: 1 MELTTENVETVLDEMRPYLMSDGGNVELVELDGPIVKLRLQGACGSCPSSAMTLRMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI +E V
Sbjct: 61 RLKEMIPEIAEIEQV 75
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL EN+E VL+E+RPYL+ + GG++ELV +D PIVK+R+ G + MT+R+ +
Sbjct: 1 MELTTENVETVLDEMRPYLM-SDGGNVELVELDGPIVKLRLQGACGSCPSSAMTLRMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
++L+E IP IA ++
Sbjct: 60 RRLKEMIPEIAEIE 73
>gi|443321007|ref|ZP_21050076.1| thioredoxin-like protein [Gloeocapsa sp. PCC 73106]
gi|442789286|gb|ELR98950.1| thioredoxin-like protein [Gloeocapsa sp. PCC 73106]
Length = 79
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 62/74 (83%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT +N+E VLDE+RPYL++DGGNV L EIDG +VRL+LQGACGSCPSS MT+KMGIER
Sbjct: 4 LALTPDNVEKVLDEMRPYLMADGGNVELVEIDGPIVRLRLQGACGSCPSSTMTLKMGIER 63
Query: 140 RLMEKIPEIVAVES 153
RL E IPEI VE
Sbjct: 64 RLREFIPEIAEVEQ 77
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L +N+EKVL+E+RPYL+ A GG++ELV ID PIV++R+ G + MT+++ +
Sbjct: 4 LALTPDNVEKVLDEMRPYLM-ADGGNVELVEIDGPIVRLRLQGACGSCPSSTMTLKMGIE 62
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 63 RRLREFIPEIAEVE 76
>gi|170078022|ref|YP_001734660.1| NifU-like protein [Synechococcus sp. PCC 7002]
gi|169885691|gb|ACA99404.1| NifU like protein [Synechococcus sp. PCC 7002]
Length = 78
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/75 (72%), Positives = 62/75 (82%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT EN+E+ LDE+RPYL +DGGNV L EIDG VV+L+LQGACGSCPSS MT++MGIER
Sbjct: 3 LALTTENVEATLDELRPYLKADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLRMGIER 62
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 63 RLRENIPEIAEVEQV 77
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EN+E L+E+RPYL A GG++ELV ID P+VK+R+ G + MT+R+ +
Sbjct: 3 LALTTENVEATLDELRPYL-KADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLRMGIE 61
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 62 RRLRENIPEIAEVE 75
>gi|434400564|ref|YP_007134568.1| nitrogen-fixing NifU domain-containing protein [Stanieria
cyanosphaera PCC 7437]
gi|428271661|gb|AFZ37602.1| nitrogen-fixing NifU domain-containing protein [Stanieria
cyanosphaera PCC 7437]
Length = 78
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 63/74 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT +N+E VLDE+RPYL++DGGNV L EI+G +V+L+LQGACGSCPSS MT+KMGIER
Sbjct: 3 LALTEQNVEEVLDEMRPYLMADGGNVELVEIEGPIVKLRLQGACGSCPSSTMTLKMGIER 62
Query: 140 RLMEKIPEIVAVES 153
RL EKIPEI VE
Sbjct: 63 RLREKIPEIAEVEQ 76
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 55/74 (74%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L E+N+E+VL+E+RPYL+ A GG++ELV I+ PIVK+R+ G + MT+++ +
Sbjct: 3 LALTEQNVEEVLDEMRPYLM-ADGGNVELVEIEGPIVKLRLQGACGSCPSSTMTLKMGIE 61
Query: 217 QKLREKIPAIAAVQ 230
++LREKIP IA V+
Sbjct: 62 RRLREKIPEIAEVE 75
>gi|218192692|gb|EEC75119.1| hypothetical protein OsI_11301 [Oryza sativa Indica Group]
Length = 288
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 7/159 (4%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA LTAEN++ VLD++RPYLI+DGG+V + ++ V+ LKL+GACGSCPSS TMKM
Sbjct: 70 SAETYELTAENVDRVLDDVRPYLIADGGDVTVASVEDGVISLKLEGACGSCPSSTTTMKM 129
Query: 136 GIERRLMEKIPEIVAV--ESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID 193
GIER L EK + V + D++ E + + L+ +RP + GGS+E+V +D
Sbjct: 130 GIERVLKEKFGDAVKDIRQVFDDDQQPAETTPQAVNGHLDILRP-AIANYGGSVEVVAVD 188
Query: 194 EPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
VR GP + ++ A+ +EK P I V L
Sbjct: 189 GEDCLVRYEGPESIGSGIKAAI----KEKFPDITNVVFL 223
>gi|17228804|ref|NP_485352.1| hypothetical protein asr1309 [Nostoc sp. PCC 7120]
gi|75909243|ref|YP_323539.1| nitrogen-fixing NifU-like protein [Anabaena variabilis ATCC 29413]
gi|17130656|dbj|BAB73266.1| asr1309 [Nostoc sp. PCC 7120]
gi|75702968|gb|ABA22644.1| Nitrogen-fixing NifU-like protein [Anabaena variabilis ATCC 29413]
Length = 76
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT +N+E+VLDE+RPYLISDGGNV L E+DG +V+L+LQGACGSCPSS MT++MGIER
Sbjct: 1 MELTIDNVETVLDEMRPYLISDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 61 RLREMIPEIAEVEQV 75
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL +N+E VL+E+RPYL+ + GG++ELV +D PIVK+R+ G + MT+R+ +
Sbjct: 1 MELTIDNVETVLDEMRPYLI-SDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 60 RRLREMIPEIAEVE 73
>gi|428769088|ref|YP_007160878.1| nitrogen-fixing NifU domain-containing protein [Cyanobacterium
aponinum PCC 10605]
gi|428683367|gb|AFZ52834.1| nitrogen-fixing NifU domain-containing protein [Cyanobacterium
aponinum PCC 10605]
Length = 78
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 63/77 (81%)
Query: 78 IELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
+ L LT EN+E VLDE+RPYL++DGGNV L EIDG V+L+LQGACGSCPSS MT++MGI
Sbjct: 1 MSLALTPENVEQVLDELRPYLMADGGNVELVEIDGPTVKLRLQGACGSCPSSTMTLRMGI 60
Query: 138 ERRLMEKIPEIVAVESV 154
ERRL E IPEI VE V
Sbjct: 61 ERRLREYIPEIAEVEQV 77
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EN+E+VL+E+RPYL+ A GG++ELV ID P VK+R+ G + MT+R+ +
Sbjct: 3 LALTPENVEQVLDELRPYLM-ADGGNVELVEIDGPTVKLRLQGACGSCPSSTMTLRMGIE 61
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 62 RRLREYIPEIAEVE 75
>gi|123965714|ref|YP_001010795.1| NifU-like protein [Prochlorococcus marinus str. MIT 9515]
gi|123200080|gb|ABM71688.1| NifU-like protein [Prochlorococcus marinus str. MIT 9515]
Length = 81
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 63/75 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT EN+E VLDE+RP+LISDGGNV + EIDG +V+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 LPLTNENVEKVLDELRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAVESV 154
+L E IPEI V V
Sbjct: 66 KLKEMIPEISEVVQV 80
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 51/73 (69%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EN+EKVL+E+RP+L+ + GG++E+ ID PIVKVR+ G + MT+++ +
Sbjct: 6 LPLTNENVEKVLDELRPFLI-SDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMGIE 64
Query: 217 QKLREKIPAIAAV 229
+KL+E IP I+ V
Sbjct: 65 RKLKEMIPEISEV 77
>gi|255548369|ref|XP_002515241.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
gi|223545721|gb|EEF47225.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
Length = 210
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 99/158 (62%), Gaps = 7/158 (4%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA + LT EN++ VL+++RPYLI+DGGNV + ++ V+ L+LQGACGSCPSS TMKM
Sbjct: 58 SAQKFELTPENVDLVLEDVRPYLIADGGNVDVVSVEDGVISLQLQGACGSCPSSTTTMKM 117
Query: 136 GIERRLMEKIPEIVA-VESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDE 194
GIER L EK + V + V DEE E E + + L+ +RP + GGS+E+V+I+
Sbjct: 118 GIERVLKEKFGDSVKDIRQVNDEEVK-ETTPEAVNRHLDILRP-AIKNYGGSVEVVSIES 175
Query: 195 PIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
V+ +GP + ++ A+ +EK P I V L+
Sbjct: 176 GECLVKYSGPESIGSGIKAAI----KEKFPEITNVVLV 209
>gi|428201125|ref|YP_007079714.1| thioredoxin-like protein [Pleurocapsa sp. PCC 7327]
gi|427978557|gb|AFY76157.1| thioredoxin-like protein [Pleurocapsa sp. PCC 7327]
Length = 78
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 63/76 (82%)
Query: 78 IELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
+ L LT +N+E VLDE+RPYL++DGGNV L EIDG +VRL+LQGACGSCPSS MT+KMGI
Sbjct: 1 MSLALTPDNVEQVLDEMRPYLMADGGNVELVEIDGPIVRLRLQGACGSCPSSTMTLKMGI 60
Query: 138 ERRLMEKIPEIVAVES 153
ERRL E IPEI VE
Sbjct: 61 ERRLREIIPEIAEVEQ 76
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L +N+E+VL+E+RPYL+ A GG++ELV ID PIV++R+ G + MT+++ +
Sbjct: 3 LALTPDNVEQVLDEMRPYLM-ADGGNVELVEIDGPIVRLRLQGACGSCPSSTMTLKMGIE 61
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 62 RRLREIIPEIAEVE 75
>gi|427420653|ref|ZP_18910836.1| thioredoxin-like protein [Leptolyngbya sp. PCC 7375]
gi|425756530|gb|EKU97384.1| thioredoxin-like protein [Leptolyngbya sp. PCC 7375]
Length = 79
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 64/76 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT +N+E VLDE+RPYL++DGGNV L +IDG VV+L+LQGACGSCPSS MT++MGIER
Sbjct: 4 LALTNDNVEKVLDELRPYLMADGGNVELVDIDGPVVKLRLQGACGSCPSSAMTLRMGIER 63
Query: 140 RLMEKIPEIVAVESVA 155
RL E IPEI +E VA
Sbjct: 64 RLREFIPEIAEIEQVA 79
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L +N+EKVL+E+RPYL+ A GG++ELV ID P+VK+R+ G + MT+R+ +
Sbjct: 4 LALTNDNVEKVLDELRPYLM-ADGGNVELVDIDGPVVKLRLQGACGSCPSSAMTLRMGIE 62
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA ++
Sbjct: 63 RRLREFIPEIAEIE 76
>gi|428312577|ref|YP_007123554.1| thioredoxin-like protein [Microcoleus sp. PCC 7113]
gi|428254189|gb|AFZ20148.1| thioredoxin-like protein [Microcoleus sp. PCC 7113]
Length = 80
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E+VLD++RPYL++DGGNV L E+DG +VRL+LQGACGSCPSS MT++MGIER
Sbjct: 5 MALTPENVETVLDDLRPYLMADGGNVELVELDGPIVRLRLQGACGSCPSSTMTLRMGIER 64
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 65 RLREFIPEIAEVEQV 79
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+ L EN+E VL+++RPYL+ A GG++ELV +D PIV++R+ G + MT+R+ +
Sbjct: 5 MALTPENVETVLDDLRPYLM-ADGGNVELVELDGPIVRLRLQGACGSCPSSTMTLRMGIE 63
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 64 RRLREFIPEIAEVE 77
>gi|428781577|ref|YP_007173363.1| thioredoxin-like protein [Dactylococcopsis salina PCC 8305]
gi|428695856|gb|AFZ52006.1| thioredoxin-like protein [Dactylococcopsis salina PCC 8305]
Length = 82
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 64/76 (84%)
Query: 79 ELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 138
+L LT EN+E VLD++RPYL++DGGNV L EI+G +V+LKLQGACGSCPSS MT+KMGIE
Sbjct: 5 KLALTPENVEKVLDDLRPYLMADGGNVDLVEIEGPIVKLKLQGACGSCPSSAMTLKMGIE 64
Query: 139 RRLMEKIPEIVAVESV 154
RRL E IPEI VE V
Sbjct: 65 RRLREFIPEIAEVEQV 80
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
Query: 158 ETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRV 213
+T L L EN+EKVL+++RPYL+ A GG+++LV I+ PIVK+++ G + MT+++
Sbjct: 3 DTKLALTPENVEKVLDDLRPYLM-ADGGNVDLVEIEGPIVKLKLQGACGSCPSSAMTLKM 61
Query: 214 AVTQKLREKIPAIAAVQ 230
+ ++LRE IP IA V+
Sbjct: 62 GIERRLREFIPEIAEVE 78
>gi|390440776|ref|ZP_10228979.1| Similar to tr|Q8YXA6|Q8YXA6 [Microcystis sp. T1-4]
gi|422303845|ref|ZP_16391196.1| Similar to tr|Q8YXA6|Q8YXA6 [Microcystis aeruginosa PCC 9806]
gi|389791130|emb|CCI13042.1| Similar to tr|Q8YXA6|Q8YXA6 [Microcystis aeruginosa PCC 9806]
gi|389835907|emb|CCI33105.1| Similar to tr|Q8YXA6|Q8YXA6 [Microcystis sp. T1-4]
Length = 78
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 63/76 (82%)
Query: 78 IELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
+ L LT +N+E VLDE+RPYL+SDGGNV L EIDG VV+++LQGACGSCPSS MT+KMGI
Sbjct: 1 MSLTLTPDNVEKVLDEMRPYLMSDGGNVELVEIDGPVVKVRLQGACGSCPSSTMTLKMGI 60
Query: 138 ERRLMEKIPEIVAVES 153
ERRL E IPEI VE
Sbjct: 61 ERRLREMIPEIAEVEQ 76
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L +N+EKVL+E+RPYL+ + GG++ELV ID P+VKVR+ G + MT+++ +
Sbjct: 3 LTLTPDNVEKVLDEMRPYLM-SDGGNVELVEIDGPVVKVRLQGACGSCPSSTMTLKMGIE 61
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 62 RRLREMIPEIAEVE 75
>gi|443310785|ref|ZP_21040425.1| thioredoxin-like protein [Synechocystis sp. PCC 7509]
gi|442779139|gb|ELR89392.1| thioredoxin-like protein [Synechocystis sp. PCC 7509]
Length = 76
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT +N+E+VLDE+RPYLISDGGNV L E+DG +V+L+LQGACGSCPSS MT++MGIER
Sbjct: 1 MELTIDNVETVLDEMRPYLISDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE +
Sbjct: 61 RLREMIPEIAEVEQI 75
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL +N+E VL+E+RPYL+ + GG++ELV +D PIVK+R+ G + MT+R+ +
Sbjct: 1 MELTIDNVETVLDEMRPYLI-SDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 60 RRLREMIPEIAEVE 73
>gi|443658650|ref|ZP_21132193.1| nifU-like domain protein [Microcystis aeruginosa DIANCHI905]
gi|443669660|ref|ZP_21134859.1| nifU-like domain protein [Microcystis aeruginosa DIANCHI905]
gi|159028416|emb|CAO89859.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330062|gb|ELS44811.1| nifU-like domain protein [Microcystis aeruginosa DIANCHI905]
gi|443332884|gb|ELS47468.1| nifU-like domain protein [Microcystis aeruginosa DIANCHI905]
Length = 78
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 63/76 (82%)
Query: 78 IELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
+ L LT +N+E VLDE+RPYL+SDGGNV L EIDG VV+++LQGACGSCPSS MT+KMGI
Sbjct: 1 MSLTLTPDNVEKVLDEMRPYLMSDGGNVELVEIDGPVVKVRLQGACGSCPSSTMTLKMGI 60
Query: 138 ERRLMEKIPEIVAVES 153
ERRL E IPEI VE
Sbjct: 61 ERRLREMIPEIAEVEQ 76
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L +N+EKVL+E+RPYL+ + GG++ELV ID P+VKVR+ G + MT+++ +
Sbjct: 3 LTLTPDNVEKVLDEMRPYLM-SDGGNVELVEIDGPVVKVRLQGACGSCPSSTMTLKMGIE 61
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 62 RRLREMIPEIAEVE 75
>gi|425443541|ref|ZP_18823663.1| NifU-like protein [Microcystis aeruginosa PCC 9717]
gi|425453174|ref|ZP_18832977.1| NifU-like protein [Microcystis aeruginosa PCC 7941]
gi|425471242|ref|ZP_18850102.1| NifU-like protein [Microcystis aeruginosa PCC 9701]
gi|389715106|emb|CCI00440.1| NifU-like protein [Microcystis aeruginosa PCC 9717]
gi|389764585|emb|CCI09229.1| NifU-like protein [Microcystis aeruginosa PCC 7941]
gi|389882894|emb|CCI36666.1| NifU-like protein [Microcystis aeruginosa PCC 9701]
Length = 78
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 63/76 (82%)
Query: 78 IELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
+ L LT +N+E VLDE+RPYL++DGGNV L EIDG VV+L+LQGACGSCPSS MT+KMGI
Sbjct: 1 MSLTLTPDNVEQVLDEMRPYLMADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLKMGI 60
Query: 138 ERRLMEKIPEIVAVES 153
ERRL E IPEI VE
Sbjct: 61 ERRLREVIPEIAEVEQ 76
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L +N+E+VL+E+RPYL+ A GG++ELV ID P+VK+R+ G + MT+++ +
Sbjct: 3 LTLTPDNVEQVLDEMRPYLM-ADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLKMGIE 61
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 62 RRLREVIPEIAEVE 75
>gi|428772315|ref|YP_007164103.1| nitrogen-fixing NifU domain-containing protein [Cyanobacterium
stanieri PCC 7202]
gi|428686594|gb|AFZ46454.1| nitrogen-fixing NifU domain protein [Cyanobacterium stanieri PCC
7202]
Length = 78
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 62/75 (82%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT +N+E VLDE+RPYL++DGGNV L EIDG V+L+LQGACGSCPSS MT++MGIER
Sbjct: 3 LALTNDNVEQVLDELRPYLMADGGNVELVEIDGPTVKLRLQGACGSCPSSTMTLRMGIER 62
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 63 RLRENIPEIAEVEQV 77
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L +N+E+VL+E+RPYL+ A GG++ELV ID P VK+R+ G + MT+R+ +
Sbjct: 3 LALTNDNVEQVLDELRPYLM-ADGGNVELVEIDGPTVKLRLQGACGSCPSSTMTLRMGIE 61
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 62 RRLRENIPEIAEVE 75
>gi|427738810|ref|YP_007058354.1| thioredoxin-like protein [Rivularia sp. PCC 7116]
gi|427373851|gb|AFY57807.1| thioredoxin-like protein [Rivularia sp. PCC 7116]
Length = 76
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT +N+E+VLDE+RPYL+SDGGNV L E+DG VV+L+LQGACGSCPSS MT++MGIER
Sbjct: 1 MELTNKNVETVLDELRPYLMSDGGNVELVELDGPVVKLRLQGACGSCPSSAMTLRMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 61 RLREMIPEIAEVEQV 75
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL +N+E VL+E+RPYL+ + GG++ELV +D P+VK+R+ G + MT+R+ +
Sbjct: 1 MELTNKNVETVLDELRPYLM-SDGGNVELVELDGPVVKLRLQGACGSCPSSAMTLRMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 60 RRLREMIPEIAEVE 73
>gi|428210559|ref|YP_007083703.1| thioredoxin-like protein [Oscillatoria acuminata PCC 6304]
gi|427998940|gb|AFY79783.1| thioredoxin-like protein [Oscillatoria acuminata PCC 6304]
Length = 80
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 65/75 (86%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT+EN+E+VLDE+RPYL++DGGNV L E++G +V+L+LQGACGSCPSS MT++MGIER
Sbjct: 5 LALTSENVETVLDELRPYLMADGGNVELVELEGPIVKLRLQGACGSCPSSAMTLRMGIER 64
Query: 140 RLMEKIPEIVAVESV 154
+L E IPEI VE V
Sbjct: 65 KLRESIPEIAEVEQV 79
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EN+E VL+E+RPYL+ A GG++ELV ++ PIVK+R+ G + MT+R+ +
Sbjct: 5 LALTSENVETVLDELRPYLM-ADGGNVELVELEGPIVKLRLQGACGSCPSSAMTLRMGIE 63
Query: 217 QKLREKIPAIAAVQ 230
+KLRE IP IA V+
Sbjct: 64 RKLRESIPEIAEVE 77
>gi|434395293|ref|YP_007130240.1| nitrogen-fixing NifU domain-containing protein [Gloeocapsa sp. PCC
7428]
gi|428267134|gb|AFZ33080.1| nitrogen-fixing NifU domain-containing protein [Gloeocapsa sp. PCC
7428]
Length = 76
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT +N+E+VLDE+RPYL+SDGGNV L E+DG VV+L+LQGACG+CPSS MT++MGIER
Sbjct: 1 MELTVDNVETVLDELRPYLMSDGGNVELVELDGPVVKLRLQGACGACPSSTMTLRMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 61 RLREMIPEIAEVEQV 75
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL +N+E VL+E+RPYL+ + GG++ELV +D P+VK+R+ G + MT+R+ +
Sbjct: 1 MELTVDNVETVLDELRPYLM-SDGGNVELVELDGPVVKLRLQGACGACPSSTMTLRMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 60 RRLREMIPEIAEVE 73
>gi|186681985|ref|YP_001865181.1| NifU domain-containing protein [Nostoc punctiforme PCC 73102]
gi|186464437|gb|ACC80238.1| nitrogen-fixing NifU domain protein [Nostoc punctiforme PCC 73102]
Length = 76
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT +N+E+VLDE+RPYL+SDGGNV L E+DG VV+L+LQGACGSCPSS MT++MGIER
Sbjct: 1 MELTIDNVETVLDEMRPYLMSDGGNVELVELDGPVVKLRLQGACGSCPSSAMTLRMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI +E V
Sbjct: 61 RLKEMIPEIAEIEQV 75
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL +N+E VL+E+RPYL+ + GG++ELV +D P+VK+R+ G + MT+R+ +
Sbjct: 1 MELTIDNVETVLDEMRPYLM-SDGGNVELVELDGPVVKLRLQGACGSCPSSAMTLRMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
++L+E IP IA ++
Sbjct: 60 RRLKEMIPEIAEIE 73
>gi|332707425|ref|ZP_08427474.1| thioredoxin-like protein [Moorea producens 3L]
gi|332353776|gb|EGJ33267.1| thioredoxin-like protein [Moorea producens 3L]
Length = 80
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E+VLDE+RPYL++DGGNV L E+DG V+L+LQGACGSCPSS MT++MGIER
Sbjct: 5 MALTPENVETVLDEMRPYLMADGGNVELVELDGPTVKLRLQGACGSCPSSTMTLRMGIER 64
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI+ VE V
Sbjct: 65 RLKEFIPEILEVEQV 79
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+ L EN+E VL+E+RPYL+ A GG++ELV +D P VK+R+ G + MT+R+ +
Sbjct: 5 MALTPENVETVLDEMRPYLM-ADGGNVELVELDGPTVKLRLQGACGSCPSSTMTLRMGIE 63
Query: 217 QKLREKIPAIAAVQ 230
++L+E IP I V+
Sbjct: 64 RRLKEFIPEILEVE 77
>gi|414076676|ref|YP_006995994.1| NifU domain-containing protein [Anabaena sp. 90]
gi|413970092|gb|AFW94181.1| NifU domain-containing protein [Anabaena sp. 90]
Length = 76
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E+VLDE+RPYLISDGGNV + E+DG +V+L+LQGACGSCPSS MT++MGIER
Sbjct: 1 MELTLENVETVLDEMRPYLISDGGNVEIVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI +E +
Sbjct: 61 RLKEMIPEISEIEQI 75
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL EN+E VL+E+RPYL+ + GG++E+V +D PIVK+R+ G + MT+R+ +
Sbjct: 1 MELTLENVETVLDEMRPYLI-SDGGNVEIVELDGPIVKLRLQGACGSCPSSTMTLRMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
++L+E IP I+ ++
Sbjct: 60 RRLKEMIPEISEIE 73
>gi|282900620|ref|ZP_06308562.1| Nitrogen-fixing NifU-like protein [Cylindrospermopsis raciborskii
CS-505]
gi|281194420|gb|EFA69375.1| Nitrogen-fixing NifU-like protein [Cylindrospermopsis raciborskii
CS-505]
Length = 76
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E+VLDE+RPYLISDGGNV + E+DG +V+L+LQGACGSCPSS MT++MGIER
Sbjct: 1 MELTLENVETVLDEMRPYLISDGGNVEVVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 61 RLKEMIPEIGEVEQV 75
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL EN+E VL+E+RPYL+ + GG++E+V +D PIVK+R+ G + MT+R+ +
Sbjct: 1 MELTLENVETVLDEMRPYLI-SDGGNVEVVELDGPIVKLRLQGACGSCPSSTMTLRMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
++L+E IP I V+
Sbjct: 60 RRLKEMIPEIGEVE 73
>gi|427728580|ref|YP_007074817.1| thioredoxin-like protein [Nostoc sp. PCC 7524]
gi|427364499|gb|AFY47220.1| thioredoxin-like protein [Nostoc sp. PCC 7524]
Length = 76
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 63/75 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E VLDE+RPYL+SDGGNV L E+DG +V+L+LQGACGSCPSS MT++MG+ER
Sbjct: 1 MELTVENVEKVLDEMRPYLMSDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGLER 60
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE +
Sbjct: 61 RLREMIPEIAEVEQI 75
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 54/74 (72%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL EN+EKVL+E+RPYL+ + GG++ELV +D PIVK+R+ G + MT+R+ +
Sbjct: 1 MELTVENVEKVLDEMRPYLM-SDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGLE 59
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 60 RRLREMIPEIAEVE 73
>gi|428222573|ref|YP_007106743.1| thioredoxin-like protein [Synechococcus sp. PCC 7502]
gi|427995913|gb|AFY74608.1| thioredoxin-like protein [Synechococcus sp. PCC 7502]
Length = 78
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 65/75 (86%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT+EN+E+VLDE+RPYL+SDGGNV L EI+G VV+L+LQGACGSCPSS MT++MGIER
Sbjct: 3 LDLTSENVETVLDELRPYLLSDGGNVELVEIEGPVVKLRLQGACGSCPSSAMTLRMGIER 62
Query: 140 RLMEKIPEIVAVESV 154
+L E IP+I VE V
Sbjct: 63 KLRESIPDIGEVEQV 77
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L+L EN+E VL+E+RPYL+ + GG++ELV I+ P+VK+R+ G + MT+R+ +
Sbjct: 3 LDLTSENVETVLDELRPYLL-SDGGNVELVEIEGPVVKLRLQGACGSCPSSAMTLRMGIE 61
Query: 217 QKLREKIPAIAAVQ 230
+KLRE IP I V+
Sbjct: 62 RKLRESIPDIGEVE 75
>gi|427713184|ref|YP_007061808.1| thioredoxin-like protein [Synechococcus sp. PCC 6312]
gi|427377313|gb|AFY61265.1| thioredoxin-like protein [Synechococcus sp. PCC 6312]
Length = 80
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 64/78 (82%)
Query: 77 AIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMG 136
A L LT ENIE VLDE+RPYL++DGGNV + E++G +VRL+LQGACGSCPSS MT++MG
Sbjct: 2 AATLELTHENIEKVLDELRPYLMADGGNVEVVEVEGPIVRLRLQGACGSCPSSTMTLRMG 61
Query: 137 IERRLMEKIPEIVAVESV 154
IER+L E IPEI VE V
Sbjct: 62 IERKLKESIPEIAEVEQV 79
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 54/74 (72%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
LEL ENIEKVL+E+RPYL+ A GG++E+V ++ PIV++R+ G + MT+R+ +
Sbjct: 5 LELTHENIEKVLDELRPYLM-ADGGNVEVVEVEGPIVRLRLQGACGSCPSSTMTLRMGIE 63
Query: 217 QKLREKIPAIAAVQ 230
+KL+E IP IA V+
Sbjct: 64 RKLKESIPEIAEVE 77
>gi|427725038|ref|YP_007072315.1| nitrogen-fixing NifU domain-containing protein [Leptolyngbya sp.
PCC 7376]
gi|427356758|gb|AFY39481.1| nitrogen-fixing NifU domain-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 78
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 63/75 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT EN+E+ LDE+RPYL++DGGNV L EIDG +V+L+LQGACGSCPSS MT++MGIER
Sbjct: 3 LALTTENVETTLDELRPYLMADGGNVELVEIDGPIVKLRLQGACGSCPSSAMTLRMGIER 62
Query: 140 RLMEKIPEIVAVESV 154
+L E IPEI +E V
Sbjct: 63 KLREVIPEIAEIEQV 77
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EN+E L+E+RPYL+ A GG++ELV ID PIVK+R+ G + MT+R+ +
Sbjct: 3 LALTTENVETTLDELRPYLM-ADGGNVELVEIDGPIVKLRLQGACGSCPSSAMTLRMGIE 61
Query: 217 QKLREKIPAIAAVQ 230
+KLRE IP IA ++
Sbjct: 62 RKLREVIPEIAEIE 75
>gi|148907013|gb|ABR16650.1| unknown [Picea sitchensis]
Length = 465
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 96/157 (61%), Gaps = 6/157 (3%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA+ LT EN++ VL+++RPYL++DGGNV + ++ V+ L+LQGACG+CPSS TMKM
Sbjct: 313 SAVTHDLTPENVDLVLNDVRPYLVADGGNVEVASVEDGVISLRLQGACGTCPSSTTTMKM 372
Query: 136 GIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEP 195
GIER L EK +++ D++ + ++ L+ +RP + GGS+E+++I+
Sbjct: 373 GIERVLKEKFGDVLKEIRQVDQQN-IHATVVSVNSHLDMLRP-AIHNYGGSVEVISIEGE 430
Query: 196 IVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
I V+ GP + V + +++K P I V LL
Sbjct: 431 ICHVKYNGPDQ----IGVGIQAAIKDKFPEITNVVLL 463
>gi|166364297|ref|YP_001656570.1| NifU-like protein [Microcystis aeruginosa NIES-843]
gi|425435916|ref|ZP_18816360.1| NifU-like protein [Microcystis aeruginosa PCC 9432]
gi|425444839|ref|ZP_18824880.1| NifU-like protein [Microcystis aeruginosa PCC 9443]
gi|425454316|ref|ZP_18834062.1| NifU-like protein [Microcystis aeruginosa PCC 9807]
gi|440753706|ref|ZP_20932908.1| nitrogen fixation protein NifU [Microcystis aeruginosa TAIHU98]
gi|166086670|dbj|BAG01378.1| NifU-like protein [Microcystis aeruginosa NIES-843]
gi|389679464|emb|CCH91748.1| NifU-like protein [Microcystis aeruginosa PCC 9432]
gi|389735314|emb|CCI01150.1| NifU-like protein [Microcystis aeruginosa PCC 9443]
gi|389805050|emb|CCI15454.1| NifU-like protein [Microcystis aeruginosa PCC 9807]
gi|440173912|gb|ELP53281.1| nitrogen fixation protein NifU [Microcystis aeruginosa TAIHU98]
Length = 78
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 62/76 (81%)
Query: 78 IELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
+ L LT N+E VLDE+RPYL++DGGNV L EIDG VV+L+LQGACGSCPSS MT+KMGI
Sbjct: 1 MSLTLTPNNVEQVLDEMRPYLMADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLKMGI 60
Query: 138 ERRLMEKIPEIVAVES 153
ERRL E IPEI VE
Sbjct: 61 ERRLREVIPEIAEVEQ 76
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L N+E+VL+E+RPYL+ A GG++ELV ID P+VK+R+ G + MT+++ +
Sbjct: 3 LTLTPNNVEQVLDEMRPYLM-ADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLKMGIE 61
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 62 RRLREVIPEIAEVE 75
>gi|218245975|ref|YP_002371346.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
8801]
gi|257059024|ref|YP_003136912.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
8802]
gi|218166453|gb|ACK65190.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8801]
gi|256589190|gb|ACV00077.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 8802]
Length = 79
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT +N+E+VLDE+RPYL++DGGNV L E+DG VV+L+LQGACGSCPSS MT++MGIER
Sbjct: 4 MELTPDNVETVLDEMRPYLMADGGNVELVELDGPVVKLRLQGACGSCPSSTMTLRMGIER 63
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 64 RLREMIPEIAEVEQV 78
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL +N+E VL+E+RPYL+ A GG++ELV +D P+VK+R+ G + MT+R+ +
Sbjct: 4 MELTPDNVETVLDEMRPYLM-ADGGNVELVELDGPVVKLRLQGACGSCPSSTMTLRMGIE 62
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 63 RRLREMIPEIAEVE 76
>gi|222624810|gb|EEE58942.1| hypothetical protein OsJ_10617 [Oryza sativa Japonica Group]
Length = 224
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 93/159 (58%), Gaps = 7/159 (4%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA LTAEN++ VLD++RPYLI+DGG+V + ++ V+ LKL+GACGSCPSS TMKM
Sbjct: 70 SAETYELTAENVDRVLDDVRPYLIADGGDVTVASVEDGVISLKLEGACGSCPSSTTTMKM 129
Query: 136 GIERRLMEKIPEIVAV--ESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID 193
GIER L EK + V + D++ E + + L+ +RP + GGS+E+V +D
Sbjct: 130 GIERVLKEKFGDAVKDIRQVFDDDQQPAEPTPQAVNGHLDILRP-AIANYGGSVEVVAVD 188
Query: 194 EPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
VR GP ++ + ++EK P I V L
Sbjct: 189 GEDCLVRYEGPE----SIGSGIKAAIKEKFPDITNVVFL 223
>gi|284929666|ref|YP_003422188.1| thioredoxin-like protein [cyanobacterium UCYN-A]
gi|284810110|gb|ADB95807.1| thioredoxin-like protein [cyanobacterium UCYN-A]
Length = 76
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/74 (70%), Positives = 61/74 (82%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT N+E VLDE+RPYLI+DGGNV L EIDG +V+L+LQGACGSCPSS MT+KMGIER
Sbjct: 1 MALTPTNVEQVLDELRPYLIADGGNVELVEIDGAIVKLRLQGACGSCPSSTMTLKMGIER 60
Query: 140 RLMEKIPEIVAVES 153
RL E IPE+ VE
Sbjct: 61 RLKEMIPEVSEVEQ 74
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+ L N+E+VL+E+RPYL+ A GG++ELV ID IVK+R+ G + MT+++ +
Sbjct: 1 MALTPTNVEQVLDELRPYLI-ADGGNVELVEIDGAIVKLRLQGACGSCPSSTMTLKMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
++L+E IP ++ V+
Sbjct: 60 RRLKEMIPEVSEVE 73
>gi|298492022|ref|YP_003722199.1| nitrogen-fixing NifU domain-containing protein ['Nostoc azollae'
0708]
gi|298233940|gb|ADI65076.1| nitrogen-fixing NifU domain protein ['Nostoc azollae' 0708]
Length = 79
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E+VLDE+RPYL+SDGGNV + E+DG +V+L+LQGACGSCPSS MT++MGIER
Sbjct: 4 MELTLENVETVLDEMRPYLMSDGGNVEVVELDGPIVKLRLQGACGSCPSSAMTLRMGIER 63
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI +E V
Sbjct: 64 RLKELIPEIAEIEQV 78
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL EN+E VL+E+RPYL+ + GG++E+V +D PIVK+R+ G + MT+R+ +
Sbjct: 4 MELTLENVETVLDEMRPYLM-SDGGNVEVVELDGPIVKLRLQGACGSCPSSAMTLRMGIE 62
Query: 217 QKLREKIPAIAAVQ 230
++L+E IP IA ++
Sbjct: 63 RRLKELIPEIAEIE 76
>gi|427720145|ref|YP_007068139.1| nitrogen-fixing NifU domain-containing protein [Calothrix sp. PCC
7507]
gi|427352581|gb|AFY35305.1| nitrogen-fixing NifU domain-containing protein [Calothrix sp. PCC
7507]
Length = 76
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT +N+E+VLDE+RPYL+SDGGNV + E+DG VV+L+LQGACGSCPSS MT++MGIER
Sbjct: 1 MELTIDNVETVLDEMRPYLMSDGGNVEVVELDGPVVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 61 RLREMIPEIAEVEQV 75
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL +N+E VL+E+RPYL+ + GG++E+V +D P+VK+R+ G + MT+R+ +
Sbjct: 1 MELTIDNVETVLDEMRPYLM-SDGGNVEVVELDGPVVKLRLQGACGSCPSSTMTLRMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 60 RRLREMIPEIAEVE 73
>gi|56751077|ref|YP_171778.1| NifU-like protein [Synechococcus elongatus PCC 6301]
gi|81299261|ref|YP_399469.1| NifU-like protein [Synechococcus elongatus PCC 7942]
gi|24414813|emb|CAD55626.1| putative NifU-like protein [Synechococcus elongatus PCC 7942]
gi|56686036|dbj|BAD79258.1| putative NifU-like protein [Synechococcus elongatus PCC 6301]
gi|81168142|gb|ABB56482.1| putative NifU-like protein [Synechococcus elongatus PCC 7942]
Length = 81
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 63/75 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT EN+E+VLDE+RPYLI+DGGNV L E+DG +V+L+L GACGSCPSS MT++MGIER
Sbjct: 6 LALTPENVETVLDELRPYLIADGGNVELVELDGPIVKLRLNGACGSCPSSTMTLRMGIER 65
Query: 140 RLMEKIPEIVAVESV 154
+L E IPEI VE V
Sbjct: 66 KLRESIPEISEVEQV 80
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EN+E VL+E+RPYL+ A GG++ELV +D PIVK+R+ G + MT+R+ +
Sbjct: 6 LALTPENVETVLDELRPYLI-ADGGNVELVELDGPIVKLRLNGACGSCPSSTMTLRMGIE 64
Query: 217 QKLREKIPAIAAVQ 230
+KLRE IP I+ V+
Sbjct: 65 RKLRESIPEISEVE 78
>gi|115452669|ref|NP_001049935.1| Os03g0314700 [Oryza sativa Japonica Group]
gi|108707815|gb|ABF95610.1| NifU-like domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113548406|dbj|BAF11849.1| Os03g0314700 [Oryza sativa Japonica Group]
gi|215697309|dbj|BAG91303.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/159 (40%), Positives = 93/159 (58%), Gaps = 7/159 (4%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA LTAEN++ VLD++RPYLI+DGG+V + ++ V+ LKL+GACGSCPSS TMKM
Sbjct: 70 SAETYELTAENVDRVLDDVRPYLIADGGDVTVASVEDGVISLKLEGACGSCPSSTTTMKM 129
Query: 136 GIERRLMEKIPEIVAV--ESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID 193
GIER L EK + V + D++ E + + L+ +RP + GGS+E+V +D
Sbjct: 130 GIERVLKEKFGDAVKDIRQVFDDDQQPAEPTPQAVNGHLDILRP-AIANYGGSVEVVAVD 188
Query: 194 EPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
VR GP ++ + ++EK P I V L
Sbjct: 189 GEDCLVRYEGPE----SIGSGIKAAIKEKFPDITNVVFL 223
>gi|226493520|ref|NP_001152596.1| LOC100286236 [Zea mays]
gi|195657915|gb|ACG48425.1| NFU3 [Zea mays]
Length = 221
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 92/158 (58%), Gaps = 7/158 (4%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA LT EN++ VLD++RPYLISDGGNV + ++ V+ LKL+GACGSCPSS TM M
Sbjct: 67 SAATYELTPENVDRVLDDVRPYLISDGGNVTVVAVEDGVISLKLEGACGSCPSSTTTMNM 126
Query: 136 GIERRLMEKIPEIVA-VESVAD-EETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID 193
GIER L EK + + V D ++ E E + + L+ +RP + GGS++++ +D
Sbjct: 127 GIERVLKEKFGDAFKEIRQVFDGDQPAAETTAEAVNRHLDILRP-AIAXYGGSVDVLXVD 185
Query: 194 EPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQL 231
VR GP ++ + ++EK P I +V
Sbjct: 186 GEDCLVRYDGPE----SIGSGIKAAIKEKFPDITSVXF 219
>gi|434404846|ref|YP_007147731.1| thioredoxin-like protein [Cylindrospermum stagnale PCC 7417]
gi|428259101|gb|AFZ25051.1| thioredoxin-like protein [Cylindrospermum stagnale PCC 7417]
Length = 76
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 63/75 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT N+E+VLDE+RPYLISDGGNV L E+DG +V+L+LQGACGSCPSS MT++MGIER
Sbjct: 1 MELTIVNVETVLDEMRPYLISDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE +
Sbjct: 61 RLKEMIPEIAEVEQI 75
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL N+E VL+E+RPYL+ + GG++ELV +D PIVK+R+ G + MT+R+ +
Sbjct: 1 MELTIVNVETVLDEMRPYLI-SDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
++L+E IP IA V+
Sbjct: 60 RRLKEMIPEIAEVE 73
>gi|282898150|ref|ZP_06306143.1| Nitrogen-fixing NifU-like protein [Raphidiopsis brookii D9]
gi|281196974|gb|EFA71877.1| Nitrogen-fixing NifU-like protein [Raphidiopsis brookii D9]
Length = 76
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E+VLDE+RPYL+SDGGNV + E+DG +V+L+LQGACGSCPSS MT++MGIER
Sbjct: 1 MELTLENVETVLDEMRPYLMSDGGNVEVVELDGPIVKLRLQGACGSCPSSTMTLRMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 61 RLKEMIPEIGEVEQV 75
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL EN+E VL+E+RPYL+ + GG++E+V +D PIVK+R+ G + MT+R+ +
Sbjct: 1 MELTLENVETVLDEMRPYLM-SDGGNVEVVELDGPIVKLRLQGACGSCPSSTMTLRMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
++L+E IP I V+
Sbjct: 60 RRLKEMIPEIGEVE 73
>gi|425463273|ref|ZP_18842625.1| NifU-like protein [Microcystis aeruginosa PCC 9808]
gi|389823394|emb|CCI28440.1| NifU-like protein [Microcystis aeruginosa PCC 9808]
Length = 78
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 62/76 (81%)
Query: 78 IELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
+ L LT N+E VLDE+RPYL++DGGNV L EIDG VV+L+LQGACGSCPSS MT+KMGI
Sbjct: 1 MSLTLTPNNVEQVLDEMRPYLMADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLKMGI 60
Query: 138 ERRLMEKIPEIVAVES 153
ERRL E IP+I VE
Sbjct: 61 ERRLREMIPDIAEVEQ 76
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L N+E+VL+E+RPYL+ A GG++ELV ID P+VK+R+ G + MT+++ +
Sbjct: 3 LTLTPNNVEQVLDEMRPYLM-ADGGNVELVEIDGPVVKLRLQGACGSCPSSTMTLKMGIE 61
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 62 RRLREMIPDIAEVE 75
>gi|86605616|ref|YP_474379.1| NifU domain-containing protein [Synechococcus sp. JA-3-3Ab]
gi|86554158|gb|ABC99116.1| NifU domain protein [Synechococcus sp. JA-3-3Ab]
Length = 80
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LTAEN+E VL+E+RPYL +DGGNV L EIDG VV+L+LQGACG+CPSS +T+KMGIER
Sbjct: 5 LELTAENVEKVLNELRPYLQADGGNVELVEIDGPVVKLRLQGACGACPSSTLTLKMGIER 64
Query: 140 RLMEKIPEIVAVESV 154
+L E IP+I+ VE V
Sbjct: 65 KLRESIPDILEVEQV 79
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
LEL EN+EKVL E+RPYL A GG++ELV ID P+VK+R+ G + +T+++ +
Sbjct: 5 LELTAENVEKVLNELRPYL-QADGGNVELVEIDGPVVKLRLQGACGACPSSTLTLKMGIE 63
Query: 217 QKLREKIPAIAAVQ 230
+KLRE IP I V+
Sbjct: 64 RKLRESIPDILEVE 77
>gi|22298836|ref|NP_682083.1| NifU protein [Thermosynechococcus elongatus BP-1]
gi|22295017|dbj|BAC08845.1| tsl1293 [Thermosynechococcus elongatus BP-1]
Length = 89
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/78 (66%), Positives = 64/78 (82%)
Query: 77 AIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMG 136
A L L+ EN+E VLDE+RPYL++DGGNV L EI+G VVRL+LQGACG+CPSS MT++MG
Sbjct: 11 AATLELSQENVEKVLDELRPYLMADGGNVELVEIEGPVVRLRLQGACGACPSSTMTLRMG 70
Query: 137 IERRLMEKIPEIVAVESV 154
IER+L E IPEI V+ V
Sbjct: 71 IERKLKESIPEIAEVQQV 88
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 56/74 (75%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
LEL++EN+EKVL+E+RPYL+ A GG++ELV I+ P+V++R+ G + MT+R+ +
Sbjct: 14 LELSQENVEKVLDELRPYLM-ADGGNVELVEIEGPVVRLRLQGACGACPSSTMTLRMGIE 72
Query: 217 QKLREKIPAIAAVQ 230
+KL+E IP IA VQ
Sbjct: 73 RKLKESIPEIAEVQ 86
>gi|126660171|ref|ZP_01731289.1| putative NifU-like protein [Cyanothece sp. CCY0110]
gi|126618536|gb|EAZ89287.1| putative NifU-like protein [Cyanothece sp. CCY0110]
Length = 80
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 63/74 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT +N+E+VLDE+RPYL++DGGNV L EI+G +V+L+LQGACGSCPSS MT+KMGIER
Sbjct: 5 MALTPDNVETVLDEMRPYLMADGGNVELVEIEGPIVKLRLQGACGSCPSSTMTLKMGIER 64
Query: 140 RLMEKIPEIVAVES 153
RL E IPEI VE
Sbjct: 65 RLREMIPEIAEVEQ 78
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+ L +N+E VL+E+RPYL+ A GG++ELV I+ PIVK+R+ G + MT+++ +
Sbjct: 5 MALTPDNVETVLDEMRPYLM-ADGGNVELVEIEGPIVKLRLQGACGSCPSSTMTLKMGIE 63
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 64 RRLREMIPEIAEVE 77
>gi|223948699|gb|ACN28433.1| unknown [Zea mays]
gi|414866514|tpg|DAA45071.1| TPA: NFU3 [Zea mays]
Length = 221
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 92/156 (58%), Gaps = 7/156 (4%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA LT EN++ VLD++RPYLISDGGNV + ++ V+ LKL+GACGSCPSS TM M
Sbjct: 67 SAATYELTPENVDRVLDDVRPYLISDGGNVTVVAVEDGVISLKLEGACGSCPSSTTTMNM 126
Query: 136 GIERRLMEKIPEIVA-VESVAD-EETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID 193
GIER L EK + + V D ++ E E + + L+ +RP + GGS++++ +D
Sbjct: 127 GIERVLKEKFGDAFKEIRQVFDGDQPAAETTAEAVNRHLDILRP-AIANYGGSVDVLAVD 185
Query: 194 EPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAV 229
VR GP ++ + ++EK P I +V
Sbjct: 186 GEDCLVRYDGPE----SIGSGIKAAIKEKFPDITSV 217
>gi|88809237|ref|ZP_01124746.1| NifU-like protein [Synechococcus sp. WH 7805]
gi|88787179|gb|EAR18337.1| NifU-like protein [Synechococcus sp. WH 7805]
Length = 81
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT+EN+E VLDE+RP+L++DGGNV + EIDG VV+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 LPLTSENVEKVLDELRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAVESV 154
++ E IPE+ V V
Sbjct: 66 KMRETIPEVSEVVQV 80
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EN+EKVL+E+RP+L+ A GG++E+V ID P+VKVR+ G + MT+++ +
Sbjct: 6 LPLTSENVEKVLDELRPFLM-ADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMGIE 64
Query: 217 QKLREKIPAIAAV 229
+K+RE IP ++ V
Sbjct: 65 RKMRETIPEVSEV 77
>gi|116073290|ref|ZP_01470552.1| NifU-like protein [Synechococcus sp. RS9916]
gi|116068595|gb|EAU74347.1| NifU-like protein [Synechococcus sp. RS9916]
Length = 81
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT+EN+E VLDE+RP+L++DGGNV + EIDG VV+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 LPLTSENVEKVLDELRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAVESV 154
++ E IPE+ V V
Sbjct: 66 KMREAIPEVSEVVQV 80
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EN+EKVL+E+RP+L+ A GG++E+V ID P+VKVR+ G + MT+++ +
Sbjct: 6 LPLTSENVEKVLDELRPFLM-ADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMGIE 64
Query: 217 QKLREKIPAIAAV 229
+K+RE IP ++ V
Sbjct: 65 RKMREAIPEVSEV 77
>gi|428224320|ref|YP_007108417.1| nitrogen-fixing NifU domain-containing protein [Geitlerinema sp.
PCC 7407]
gi|427984221|gb|AFY65365.1| nitrogen-fixing NifU domain protein [Geitlerinema sp. PCC 7407]
Length = 80
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 63/75 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E VLD++RPYL++DGGNV L +I+G +V+L+LQGACGSCPSS MT+KMGIER
Sbjct: 5 MELTPENVEKVLDDLRPYLMADGGNVELADIEGPIVKLRLQGACGSCPSSAMTLKMGIER 64
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 65 RLREMIPEIAEVEQV 79
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL EN+EKVL+++RPYL+ A GG++EL I+ PIVK+R+ G + MT+++ +
Sbjct: 5 MELTPENVEKVLDDLRPYLM-ADGGNVELADIEGPIVKLRLQGACGSCPSSAMTLKMGIE 63
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 64 RRLREMIPEIAEVE 77
>gi|172035933|ref|YP_001802434.1| NifU-like protein [Cyanothece sp. ATCC 51142]
gi|354556021|ref|ZP_08975319.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. ATCC
51472]
gi|171697387|gb|ACB50368.1| NifU-like protein [Cyanothece sp. ATCC 51142]
gi|353552020|gb|EHC21418.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. ATCC
51472]
Length = 80
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 62/74 (83%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT +N+E VLDE+RPYL++DGGNV L EI+G +V+L+LQGACGSCPSS MT+KMGIER
Sbjct: 5 MALTPDNVEQVLDEMRPYLMADGGNVELVEIEGPIVKLRLQGACGSCPSSTMTLKMGIER 64
Query: 140 RLMEKIPEIVAVES 153
RL E IPEI VE
Sbjct: 65 RLREMIPEIAEVEQ 78
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+ L +N+E+VL+E+RPYL+ A GG++ELV I+ PIVK+R+ G + MT+++ +
Sbjct: 5 MALTPDNVEQVLDEMRPYLM-ADGGNVELVEIEGPIVKLRLQGACGSCPSSTMTLKMGIE 63
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA V+
Sbjct: 64 RRLREMIPEIAEVE 77
>gi|168037489|ref|XP_001771236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677477|gb|EDQ63947.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 98/159 (61%), Gaps = 14/159 (8%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA T EN++ VLDE+RPYLI+DGGNV + + VV L+LQGACG+CPSS TMKM
Sbjct: 16 SAETYEFTVENVDKVLDEVRPYLIADGGNVEVVAVKDGVVSLRLQGACGTCPSSTSTMKM 75
Query: 136 GIERRLMEKIPEIVA-VESVADEETGLEL--NEENIEKVLEEIRPYLVGAAGGSLELVTI 192
GIER LMEK +++ V V ++ G + +E++E + IR Y GGS+E+V++
Sbjct: 76 GIERVLMEKFGDVLKEVVQVDKQDIGASVLAVDEHLEMLRPAIRNY-----GGSVEVVSV 130
Query: 193 D--EPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAV 229
D + +V+ GPA M ++ A+ ++K P I V
Sbjct: 131 DTVKGECQVKYHGPAPIGMGIQAAI----KDKFPDIQVV 165
>gi|78778799|ref|YP_396911.1| NifU-like protein [Prochlorococcus marinus str. MIT 9312]
gi|123968006|ref|YP_001008864.1| NifU-like protein [Prochlorococcus marinus str. AS9601]
gi|126695776|ref|YP_001090662.1| NifU-like protein [Prochlorococcus marinus str. MIT 9301]
gi|157412831|ref|YP_001483697.1| NifU-like protein [Prochlorococcus marinus str. MIT 9215]
gi|254525524|ref|ZP_05137576.1| NifU domain protein [Prochlorococcus marinus str. MIT 9202]
gi|78712298|gb|ABB49475.1| NifU-like protein [Prochlorococcus marinus str. MIT 9312]
gi|91070321|gb|ABE11238.1| NifU-like protein [uncultured Prochlorococcus marinus clone
HF10-88F10]
gi|123198116|gb|ABM69757.1| NifU-like protein [Prochlorococcus marinus str. AS9601]
gi|126542819|gb|ABO17061.1| NifU-like protein [Prochlorococcus marinus str. MIT 9301]
gi|157387406|gb|ABV50111.1| NifU-like protein [Prochlorococcus marinus str. MIT 9215]
gi|221536948|gb|EEE39401.1| NifU domain protein [Prochlorococcus marinus str. MIT 9202]
Length = 81
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 62/75 (82%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT EN+E VLDE+RP+LISDGGNV + EIDG +V+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 LSLTNENVEKVLDELRPFLISDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAVESV 154
+L E IPEI V V
Sbjct: 66 KLKEMIPEISEVVQV 80
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 51/73 (69%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EN+EKVL+E+RP+L+ + GG++E+ ID PIVKVR+ G + MT+++ +
Sbjct: 6 LSLTNENVEKVLDELRPFLI-SDGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMGIE 64
Query: 217 QKLREKIPAIAAV 229
+KL+E IP I+ V
Sbjct: 65 RKLKEMIPEISEV 77
>gi|254422508|ref|ZP_05036226.1| hypothetical protein S7335_2660 [Synechococcus sp. PCC 7335]
gi|196189997|gb|EDX84961.1| hypothetical protein S7335_2660 [Synechococcus sp. PCC 7335]
Length = 79
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 62/75 (82%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT N+E VLDE+RPYL++DGGNV L E+DG +V+L+LQGACGSCPSS MT++MGIER
Sbjct: 4 LALTKPNVEKVLDELRPYLMADGGNVELVELDGPIVKLRLQGACGSCPSSAMTLRMGIER 63
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI +E V
Sbjct: 64 RLREFIPEIAEIEQV 78
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L + N+EKVL+E+RPYL+ A GG++ELV +D PIVK+R+ G + MT+R+ +
Sbjct: 4 LALTKPNVEKVLDELRPYLM-ADGGNVELVELDGPIVKLRLQGACGSCPSSAMTLRMGIE 62
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP IA ++
Sbjct: 63 RRLREFIPEIAEIE 76
>gi|220907447|ref|YP_002482758.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
7425]
gi|219864058|gb|ACL44397.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7425]
Length = 76
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 63/75 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT +N+E VLDE+RPYL++DGGNV L E++G +VRL+LQGACGSCPSS MT++MGIER
Sbjct: 1 MELTTDNVEKVLDELRPYLMADGGNVELVELEGPIVRLRLQGACGSCPSSTMTLRMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
+L E IPEI VE V
Sbjct: 61 KLRESIPEIAEVEQV 75
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 54/74 (72%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL +N+EKVL+E+RPYL+ A GG++ELV ++ PIV++R+ G + MT+R+ +
Sbjct: 1 MELTTDNVEKVLDELRPYLM-ADGGNVELVELEGPIVRLRLQGACGSCPSSTMTLRMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
+KLRE IP IA V+
Sbjct: 60 RKLRESIPEIAEVE 73
>gi|86608468|ref|YP_477230.1| NifU domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557010|gb|ABD01967.1| NifU domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 80
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 63/75 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L L EN+E VL+E+RPYL++DGGNV L EIDG VV+L+LQGACG+CPSS MT+KMGIER
Sbjct: 5 LELNTENVEKVLNELRPYLMADGGNVELVEIDGPVVKLRLQGACGACPSSTMTLKMGIER 64
Query: 140 RLMEKIPEIVAVESV 154
+L E IP+I+ VE V
Sbjct: 65 KLRESIPDILEVEQV 79
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 53/74 (71%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
LELN EN+EKVL E+RPYL+ A GG++ELV ID P+VK+R+ G + MT+++ +
Sbjct: 5 LELNTENVEKVLNELRPYLM-ADGGNVELVEIDGPVVKLRLQGACGACPSSTMTLKMGIE 63
Query: 217 QKLREKIPAIAAVQ 230
+KLRE IP I V+
Sbjct: 64 RKLRESIPDILEVE 77
>gi|158334696|ref|YP_001515868.1| NifU domain-containing protein [Acaryochloris marina MBIC11017]
gi|359463262|ref|ZP_09251825.1| NifU domain-containing protein [Acaryochloris sp. CCMEE 5410]
gi|158304937|gb|ABW26554.1| NifU domain protein [Acaryochloris marina MBIC11017]
Length = 80
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 63/75 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L L EN+E+VLDE+RPYL++DGGNV L E++G VV+L+LQGACGSCPSS MT+KMGIER
Sbjct: 5 LELNPENVETVLDELRPYLMADGGNVELVEVEGPVVKLRLQGACGSCPSSAMTLKMGIER 64
Query: 140 RLMEKIPEIVAVESV 154
+L + IPEI VE V
Sbjct: 65 KLRDTIPEIAEVEQV 79
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 54/74 (72%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
LELN EN+E VL+E+RPYL+ A GG++ELV ++ P+VK+R+ G + MT+++ +
Sbjct: 5 LELNPENVETVLDELRPYLM-ADGGNVELVEVEGPVVKLRLQGACGSCPSSAMTLKMGIE 63
Query: 217 QKLREKIPAIAAVQ 230
+KLR+ IP IA V+
Sbjct: 64 RKLRDTIPEIAEVE 77
>gi|148238937|ref|YP_001224324.1| NifU-like protein [Synechococcus sp. WH 7803]
gi|147847476|emb|CAK23027.1| NifU-like protein [Synechococcus sp. WH 7803]
Length = 81
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+PLT+EN+E VLDE+RP+L++DGGNV + EIDG VV+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 MPLTSENVEKVLDELRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAVESV 154
++ E IPE+ V V
Sbjct: 66 KMREAIPEVSEVVQV 80
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQK 218
L EN+EKVL+E+RP+L+ A GG++E+V ID P+VKVR+ G + MT+++ + +K
Sbjct: 8 LTSENVEKVLDELRPFLM-ADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMGIERK 66
Query: 219 LREKIPAIAAV 229
+RE IP ++ V
Sbjct: 67 MREAIPEVSEV 77
>gi|357511421|ref|XP_003625999.1| NifU-like protein [Medicago truncatula]
gi|355501014|gb|AES82217.1| NifU-like protein [Medicago truncatula]
gi|388517667|gb|AFK46895.1| unknown [Medicago truncatula]
Length = 216
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 93/157 (59%), Gaps = 6/157 (3%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA + LTA N++ VL+++RPYLISDGGNV + ++ VV LKLQGAC SCPSS TMKM
Sbjct: 63 SAQKFELTASNVDLVLEDVRPYLISDGGNVDVVSVENGVVSLKLQGACESCPSSTTTMKM 122
Query: 136 GIERRLMEKIPE-IVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDE 194
GIER L EK + I + V D++ E E + LE +RP + GGS+++++++
Sbjct: 123 GIERVLKEKFGDSIEDIVQVFDDDQARETTVEAVNNHLEILRP-AIKNYGGSVQVLSVEG 181
Query: 195 PIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQL 231
V GP + V+ A+ +EK P I V
Sbjct: 182 GDCVVEYVGPESIGSGVKAAI----KEKFPDILNVTF 214
>gi|87125583|ref|ZP_01081428.1| NifU-like protein [Synechococcus sp. RS9917]
gi|86166883|gb|EAQ68145.1| NifU-like protein [Synechococcus sp. RS9917]
Length = 81
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 64/75 (85%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPL++EN+E VLDE+RP+L++DGGNV + EIDG VV+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 LPLSSENVEKVLDELRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAVESV 154
+L E IPE+ V V
Sbjct: 66 KLREMIPEVSEVVQV 80
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 53/73 (72%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L+ EN+EKVL+E+RP+L+ A GG++E+V ID P+VKVR+ G + MT+++ +
Sbjct: 6 LPLSSENVEKVLDELRPFLM-ADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMGIE 64
Query: 217 QKLREKIPAIAAV 229
+KLRE IP ++ V
Sbjct: 65 RKLREMIPEVSEV 77
>gi|242041121|ref|XP_002467955.1| hypothetical protein SORBIDRAFT_01g037130 [Sorghum bicolor]
gi|241921809|gb|EER94953.1| hypothetical protein SORBIDRAFT_01g037130 [Sorghum bicolor]
Length = 222
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 91/156 (58%), Gaps = 7/156 (4%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA LT EN++ VLD++RPYLISDGGNV + ++ V+ LKL+GACGSCPSS TM M
Sbjct: 68 SAATYELTPENVDRVLDDVRPYLISDGGNVTVVAVEDGVISLKLEGACGSCPSSTTTMNM 127
Query: 136 GIERRLMEKIPEIVA-VESVADEET-GLELNEENIEKVLEEIRPYLVGAAGGSLELVTID 193
GIER L EK + + V DE+ E E + + L+ +RP + GGS++++ +D
Sbjct: 128 GIERVLKEKFGDAFKEIRQVFDEDQPPAETTPEAVNRHLDILRP-AIANYGGSVDVLAVD 186
Query: 194 EPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAV 229
VR GP ++ + ++EK P I V
Sbjct: 187 GEDCLVRYDGPE----SIGSGIKAAIKEKFPDITNV 218
>gi|87303149|ref|ZP_01085947.1| NifU-like protein [Synechococcus sp. WH 5701]
gi|87282316|gb|EAQ74276.1| NifU-like protein [Synechococcus sp. WH 5701]
Length = 97
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 67/85 (78%), Gaps = 8/85 (9%)
Query: 72 ATPDSA--IELP------LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGAC 123
ATPD++ +E P LT EN+E VLDE+RPYL++DGGNV + EIDG V+++LQGAC
Sbjct: 6 ATPDTSASVEAPISDPRALTVENVERVLDELRPYLMADGGNVEIVEIDGPTVKVRLQGAC 65
Query: 124 GSCPSSVMTMKMGIERRLMEKIPEI 148
GSCPSS MT+KMGIER+L E IPE+
Sbjct: 66 GSCPSSTMTLKMGIERKLREAIPEV 90
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%), Gaps = 6/75 (8%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQK 218
L EN+E+VL+E+RPYL+ A GG++E+V ID P VKVR+ G + MT+++ + +K
Sbjct: 24 LTVENVERVLDELRPYLM-ADGGNVEIVEIDGPTVKVRLQGACGSCPSSTMTLKMGIERK 82
Query: 219 LREKIPAI-AAVQLL 232
LRE IP + VQ+L
Sbjct: 83 LREAIPEVNEVVQVL 97
>gi|428216612|ref|YP_007101077.1| nitrogen-fixing NifU domain-containing protein [Pseudanabaena sp.
PCC 7367]
gi|427988394|gb|AFY68649.1| nitrogen-fixing NifU domain-containing protein [Pseudanabaena sp.
PCC 7367]
Length = 78
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 64/73 (87%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
LT +N+E+VLDE+RPYL++DGGNV L E++G +VRL+LQGACGSCPSS MT++MGIER+L
Sbjct: 5 LTMDNVENVLDELRPYLLADGGNVELVEVEGPIVRLRLQGACGSCPSSAMTLRMGIERKL 64
Query: 142 MEKIPEIVAVESV 154
E+IP+I VE V
Sbjct: 65 REEIPDIGEVEQV 77
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 5/73 (6%)
Query: 162 ELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQ 217
EL +N+E VL+E+RPYL+ A GG++ELV ++ PIV++R+ G + MT+R+ + +
Sbjct: 4 ELTMDNVENVLDELRPYLL-ADGGNVELVEVEGPIVRLRLQGACGSCPSSAMTLRMGIER 62
Query: 218 KLREKIPAIAAVQ 230
KLRE+IP I V+
Sbjct: 63 KLREEIPDIGEVE 75
>gi|16332125|ref|NP_442853.1| NifU protein [Synechocystis sp. PCC 6803]
gi|383323868|ref|YP_005384722.1| NifU protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383327037|ref|YP_005387891.1| NifU protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492921|ref|YP_005410598.1| NifU protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384438189|ref|YP_005652914.1| NifU protein [Synechocystis sp. PCC 6803]
gi|451816277|ref|YP_007452729.1| NifU protein [Synechocystis sp. PCC 6803]
gi|1653754|dbj|BAA18665.1| NifU protein [Synechocystis sp. PCC 6803]
gi|339275222|dbj|BAK51709.1| NifU protein [Synechocystis sp. PCC 6803]
gi|359273188|dbj|BAL30707.1| NifU protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276358|dbj|BAL33876.1| NifU protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279528|dbj|BAL37045.1| NifU protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960233|dbj|BAM53473.1| NifU protein [Synechocystis sp. PCC 6803]
gi|451782246|gb|AGF53215.1| NifU protein [Synechocystis sp. PCC 6803]
Length = 76
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 63/75 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT N+E+VLDE+RPYL++DGGNV + E+DG +V+++LQGACGSCPSS MT+KMGIER
Sbjct: 1 MELTLNNVETVLDELRPYLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
+L E IPEI VE V
Sbjct: 61 KLREMIPEIAEVEQV 75
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+EL N+E VL+E+RPYL+ A GG++E+V +D PIVKVR+ G + MT+++ +
Sbjct: 1 MELTLNNVETVLDELRPYLM-ADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMGIE 59
Query: 217 QKLREKIPAIAAVQ 230
+KLRE IP IA V+
Sbjct: 60 RKLREMIPEIAEVE 73
>gi|113476915|ref|YP_722976.1| nitrogen-fixing NifU-like protein [Trichodesmium erythraeum IMS101]
gi|110167963|gb|ABG52503.1| nitrogen-fixing NifU-like [Trichodesmium erythraeum IMS101]
Length = 80
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 62/73 (84%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
LT EN+E VLDE+RPYL +DGGNV L +I+G +V+L+LQGAC SCPSS MT+KMGIER+L
Sbjct: 7 LTNENVEIVLDELRPYLAADGGNVELVDIEGPIVKLRLQGACSSCPSSTMTLKMGIERKL 66
Query: 142 MEKIPEIVAVESV 154
E+IPEI VESV
Sbjct: 67 REEIPEIAEVESV 79
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 5/72 (6%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQK 218
L EN+E VL+E+RPYL A GG++ELV I+ PIVK+R+ G + MT+++ + +K
Sbjct: 7 LTNENVEIVLDELRPYL-AADGGNVELVDIEGPIVKLRLQGACSSCPSSTMTLKMGIERK 65
Query: 219 LREKIPAIAAVQ 230
LRE+IP IA V+
Sbjct: 66 LREEIPEIAEVE 77
>gi|427702706|ref|YP_007045928.1| thioredoxin-like protein [Cyanobium gracile PCC 6307]
gi|427345874|gb|AFY28587.1| thioredoxin-like protein [Cyanobium gracile PCC 6307]
Length = 95
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/70 (70%), Positives = 60/70 (85%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
LT EN+E VLDE+RPYL++DGGNV + EIDG VV+++LQGACGSCPSS MT+KMGIER+L
Sbjct: 22 LTIENVERVLDELRPYLMADGGNVEIVEIDGPVVKVRLQGACGSCPSSTMTLKMGIERKL 81
Query: 142 MEKIPEIVAV 151
E IPE+ V
Sbjct: 82 REAIPEVSEV 91
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQK 218
L EN+E+VL+E+RPYL+ A GG++E+V ID P+VKVR+ G + MT+++ + +K
Sbjct: 22 LTIENVERVLDELRPYLM-ADGGNVEIVEIDGPVVKVRLQGACGSCPSSTMTLKMGIERK 80
Query: 219 LREKIPAIAAV 229
LRE IP ++ V
Sbjct: 81 LREAIPEVSEV 91
>gi|159902957|ref|YP_001550301.1| NifU-like protein [Prochlorococcus marinus str. MIT 9211]
gi|159888133|gb|ABX08347.1| NifU-like protein [Prochlorococcus marinus str. MIT 9211]
Length = 81
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 62/72 (86%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+PLT +N+E VLDE+RP+L++DGGNV + EIDG +V+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 MPLTKDNVEKVLDELRPFLMADGGNVEIVEIDGPIVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAV 151
+L E IPE+ V
Sbjct: 66 KLREMIPEVSEV 77
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 55/75 (73%), Gaps = 6/75 (8%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQK 218
L ++N+EKVL+E+RP+L+ A GG++E+V ID PIVKVR+ G + MT+++ + +K
Sbjct: 8 LTKDNVEKVLDELRPFLM-ADGGNVEIVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERK 66
Query: 219 LREKIPAIA-AVQLL 232
LRE IP ++ VQ+L
Sbjct: 67 LREMIPEVSEVVQIL 81
>gi|72383588|ref|YP_292943.1| NifU-like protein [Prochlorococcus marinus str. NATL2A]
gi|124025184|ref|YP_001014300.1| NifU-like protein [Prochlorococcus marinus str. NATL1A]
gi|72003438|gb|AAZ59240.1| NifU-like protein [Prochlorococcus marinus str. NATL2A]
gi|123960252|gb|ABM75035.1| NifU-like protein [Prochlorococcus marinus str. NATL1A]
Length = 81
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 61/72 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT EN+E VLDE+RP+L++DGGNV + EIDG +V+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 LALTTENVEKVLDELRPFLMADGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAV 151
+L E IPE+ V
Sbjct: 66 KLREMIPEVSEV 77
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 51/73 (69%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EN+EKVL+E+RP+L+ A GG++E+ ID PIVKVR+ G + MT+++ +
Sbjct: 6 LALTTENVEKVLDELRPFLM-ADGGNVEIAEIDGPIVKVRLQGACGSCPSSTMTLKMGIE 64
Query: 217 QKLREKIPAIAAV 229
+KLRE IP ++ V
Sbjct: 65 RKLREMIPEVSEV 77
>gi|194476553|ref|YP_002048732.1| NifU-like protein [Paulinella chromatophora]
gi|171191560|gb|ACB42522.1| NifU-like protein [Paulinella chromatophora]
Length = 81
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 62/72 (86%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L LT EN+E+VL+E+RP+LI+DGGNV + EIDG VV+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 LALTLENVETVLNELRPFLIADGGNVEVAEIDGPVVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAV 151
+L E IPE+ V
Sbjct: 66 KLREAIPEVSEV 77
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 49/73 (67%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L L EN+E VL E+RP+L+ A GG++E+ ID P+VKVR+ G + MT+++ +
Sbjct: 6 LALTLENVETVLNELRPFLI-ADGGNVEVAEIDGPVVKVRLQGACGSCPSSTMTLKMGIE 64
Query: 217 QKLREKIPAIAAV 229
+KLRE IP ++ V
Sbjct: 65 RKLREAIPEVSEV 77
>gi|33862527|ref|NP_894087.1| NifU-like protein [Prochlorococcus marinus str. MIT 9313]
gi|124023791|ref|YP_001018098.1| NifU-like protein [Prochlorococcus marinus str. MIT 9303]
gi|33640640|emb|CAE20429.1| NifU-like protein [Prochlorococcus marinus str. MIT 9313]
gi|123964077|gb|ABM78833.1| NifU-like protein [Prochlorococcus marinus str. MIT 9303]
Length = 81
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 63/75 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E+VLDE+RP+L++DGGNV + EIDG VV+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 MALTNENVETVLDELRPFLMADGGNVEIVEIDGPVVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAVESV 154
+L E IPE+ V V
Sbjct: 66 KLREMIPEVSEVVQV 80
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+ L EN+E VL+E+RP+L+ A GG++E+V ID P+VKVR+ G + MT+++ +
Sbjct: 6 MALTNENVETVLDELRPFLM-ADGGNVEIVEIDGPVVKVRLQGACGSCPSSTMTLKMGIE 64
Query: 217 QKLREKIPAIAAV 229
+KLRE IP ++ V
Sbjct: 65 RKLREMIPEVSEV 77
>gi|67921653|ref|ZP_00515171.1| Nitrogen-fixing NifU, C-terminal [Crocosphaera watsonii WH 8501]
gi|416385495|ref|ZP_11684792.1| nitrogen-fixing NifU domain protein [Crocosphaera watsonii WH 0003]
gi|67856765|gb|EAM52006.1| Nitrogen-fixing NifU, C-terminal [Crocosphaera watsonii WH 8501]
gi|357264875|gb|EHJ13707.1| nitrogen-fixing NifU domain protein [Crocosphaera watsonii WH 0003]
Length = 80
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 63/75 (84%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L L +N+E+VLDE+RPYL++DGGNV L +I+G VV+L+LQGACGSCPSS MT++MGIER
Sbjct: 5 LVLNPDNVETVLDEMRPYLMADGGNVELVDIEGPVVKLRLQGACGSCPSSTMTLRMGIER 64
Query: 140 RLMEKIPEIVAVESV 154
RL E IPEI VE V
Sbjct: 65 RLREMIPEIGEVEQV 79
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L LN +N+E VL+E+RPYL+ A GG++ELV I+ P+VK+R+ G + MT+R+ +
Sbjct: 5 LVLNPDNVETVLDEMRPYLM-ADGGNVELVDIEGPVVKLRLQGACGSCPSSTMTLRMGIE 63
Query: 217 QKLREKIPAIAAVQ 230
++LRE IP I V+
Sbjct: 64 RRLREMIPEIGEVE 77
>gi|434389342|ref|YP_007099953.1| thioredoxin-like protein [Chamaesiphon minutus PCC 6605]
gi|428020332|gb|AFY96426.1| thioredoxin-like protein [Chamaesiphon minutus PCC 6605]
Length = 80
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 61/75 (81%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L L N+E+VLD +RPYL++DGGNV L +IDG +V+L+LQGACGSCPSS MT+KMGIER
Sbjct: 5 LTLNPANVETVLDTLRPYLMADGGNVELVDIDGPIVKLRLQGACGSCPSSTMTLKMGIER 64
Query: 140 RLMEKIPEIVAVESV 154
+L + IPEI VE V
Sbjct: 65 KLCDMIPEISGVEQV 79
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
L LN N+E VL+ +RPYL+ A GG++ELV ID PIVK+R+ G + MT+++ +
Sbjct: 5 LTLNPANVETVLDTLRPYLM-ADGGNVELVDIDGPIVKLRLQGACGSCPSSTMTLKMGIE 63
Query: 217 QKLREKIPAIAAVQ 230
+KL + IP I+ V+
Sbjct: 64 RKLCDMIPEISGVE 77
>gi|317967928|ref|ZP_07969318.1| NifU-like protein [Synechococcus sp. CB0205]
Length = 92
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 65/85 (76%)
Query: 70 AVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSS 129
A A ++A LT EN+E LDE+RPYL++DGGNV + EIDG +V+++LQGACGSCPSS
Sbjct: 7 AAAATENADPRALTIENVERTLDELRPYLMADGGNVEVVEIDGPIVKVRLQGACGSCPSS 66
Query: 130 VMTMKMGIERRLMEKIPEIVAVESV 154
MT+KMGIER+L E IPE+ V V
Sbjct: 67 TMTLKMGIERKLREAIPEVSEVVQV 91
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQK 218
L EN+E+ L+E+RPYL+ A GG++E+V ID PIVKVR+ G + MT+++ + +K
Sbjct: 19 LTIENVERTLDELRPYLM-ADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERK 77
Query: 219 LREKIPAIAAV 229
LRE IP ++ V
Sbjct: 78 LREAIPEVSEV 88
>gi|388492810|gb|AFK34471.1| unknown [Lotus japonicus]
Length = 225
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 92/157 (58%), Gaps = 7/157 (4%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA + LTA N++ VL+++RPYLISDGGNV + ++ V+ LKLQGAC SCPSS TMK+
Sbjct: 65 SAAKFDLTAPNVDLVLEDVRPYLISDGGNVEVVSVENGVISLKLQGACESCPSSTTTMKL 124
Query: 136 GIERRLMEKIPEIVA-VESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDE 194
GIER L EK + V + V DEE E E + LE +RP + GGS+++++++
Sbjct: 125 GIERVLKEKFGDAVKDIVQVYDEEPK-ETTVEAVNNHLEILRP-AIKNFGGSVQVLSVEG 182
Query: 195 PIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQL 231
V GP + + + ++EK P I V
Sbjct: 183 SDCHVDYVGPDS----IGSGIKAAIKEKFPDILNVTF 215
>gi|452824119|gb|EME31124.1| iron-sulfur cluster scaffold protein [Galdieria sulphuraria]
Length = 450
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 7/142 (4%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERR 140
LT EN+ VLDE+RPYL SDGGNV + +D N V L LQGACG+CPSS TMK+GIER
Sbjct: 303 LTVENVNLVLDEVRPYLESDGGNVKVLSVDTNRNVVLLLQGACGTCPSSTTTMKLGIERI 362
Query: 141 LMEKIP---EIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIV 197
L ++ P EIVA VA T + L EE E +LEEIRP ++G GGS+ + ++ V
Sbjct: 363 LRQRFPNIGEIVAQSEVA-SVTTIPL-EERCESLLEEIRPAIIG-LGGSISVSRVENNQV 419
Query: 198 KVRITGPAAGVMTVRVAVTQKL 219
+ GP + +A+ +KL
Sbjct: 420 FLLYQGPDKIKYGIELALKEKL 441
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 147 EIVAVESVADE-------ETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKV 199
E+VA + DE E+G L EN+ VL+E+RPYL + GG+++++++D V
Sbjct: 280 EVVANNNRVDERSNSNTAESGSFLTVENVNLVLDEVRPYL-ESDGGNVKVLSVDTNRNVV 338
Query: 200 RITGPAAG-----VMTVRVAVTQKLREKIPAIAAV 229
+ A G T+++ + + LR++ P I +
Sbjct: 339 LLLQGACGTCPSSTTTMKLGIERILRQRFPNIGEI 373
>gi|113954347|ref|YP_729865.1| NifU domain-containing protein [Synechococcus sp. CC9311]
gi|113881698|gb|ABI46656.1| NifU domain protein [Synechococcus sp. CC9311]
Length = 81
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 62/75 (82%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E VLDE+RP+L++DGGNV + EIDG VV+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 MALTNENVEKVLDELRPFLMADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAVESV 154
++ E IPE+ V V
Sbjct: 66 KMRESIPEVSEVVQV 80
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 52/73 (71%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+ L EN+EKVL+E+RP+L+ A GG++E+V ID P+VKVR+ G + MT+++ +
Sbjct: 6 MALTNENVEKVLDELRPFLM-ADGGNVEVVEIDGPVVKVRLQGACGSCPSSTMTLKMGIE 64
Query: 217 QKLREKIPAIAAV 229
+K+RE IP ++ V
Sbjct: 65 RKMRESIPEVSEV 77
>gi|298706477|emb|CBJ29464.1| iron-sulfur cluster assembly protein, similar to nifU [Ectocarpus
siliculosus]
Length = 494
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 85/130 (65%), Gaps = 7/130 (5%)
Query: 79 ELPLTAENIESVLDEIRPYLISDGGNVALH--EIDGNVVRLKLQGACGSCPSSVMTMKMG 136
+L T EN++ VLDE+RPYLI+DGGNV + +ID VV+L LQGACGSCPSS TMKMG
Sbjct: 340 DLEFTLENVDKVLDEVRPYLIADGGNVRVMGVDIDRRVVKLALQGACGSCPSSTTTMKMG 399
Query: 137 IERRLMEKIPEIVAVESVADEETGLELNEEN---IEKVLEEIRPYLVGAAGGSLELVTID 193
IER L E + VE V DE +G + E +E +LE +RP +V A +E++++
Sbjct: 400 IERVLNENFLNMGGVEQV-DEASGNAMAEATTAVVEAILEPLRPAMV-AMRAKVEVLSVL 457
Query: 194 EPIVKVRITG 203
+ VK+ +G
Sbjct: 458 DGHVKLTYSG 467
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLEL--VTIDEPIVKVRITGPA----AGVMTVRVA 214
LE EN++KVL+E+RPYL+ A GG++ + V ID +VK+ + G + T+++
Sbjct: 341 LEFTLENVDKVLDEVRPYLI-ADGGNVRVMGVDIDRRVVKLALQGACGSCPSSTTTMKMG 399
Query: 215 VTQKLREKIPAIAAVQ 230
+ + L E + V+
Sbjct: 400 IERVLNENFLNMGGVE 415
>gi|116072270|ref|ZP_01469537.1| NifU-like protein [Synechococcus sp. BL107]
gi|116064792|gb|EAU70551.1| NifU-like protein [Synechococcus sp. BL107]
Length = 81
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 62/73 (84%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
LT EN+E+VLDE+RP+L++DGGNV + EIDG +V+++LQGACGSCPSS MT+KMGIER++
Sbjct: 8 LTLENVETVLDELRPFLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKM 67
Query: 142 MEKIPEIVAVESV 154
E IPE+ V V
Sbjct: 68 RESIPEVSEVVQV 80
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQK 218
L EN+E VL+E+RP+L+ A GG++E+V ID PIVKVR+ G + MT+++ + +K
Sbjct: 8 LTLENVETVLDELRPFLM-ADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERK 66
Query: 219 LREKIPAIAAV 229
+RE IP ++ V
Sbjct: 67 MRESIPEVSEV 77
>gi|326494232|dbj|BAJ90385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 224
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 92/156 (58%), Gaps = 7/156 (4%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA LT +N++ VLD++RPYLISDGG+VA+ ++ VV L+L+GAC SCPSS TM M
Sbjct: 70 SAATYELTPDNVDRVLDDVRPYLISDGGDVAVVSVEDGVVSLRLEGACSSCPSSTTTMNM 129
Query: 136 GIERRLMEKIPE-IVAVESVAD-EETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID 193
GIER L EK + I + V D ++ E E + + L+ +RP + GGS+E++ +D
Sbjct: 130 GIERVLKEKFGDAIKDIRQVFDGDQQPEETTPEAVNRHLDILRP-AIANYGGSVEVLAVD 188
Query: 194 EPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAV 229
V+ GP ++ V ++EK P I V
Sbjct: 189 GEDCLVKYDGPE----SIGSGVKAAIKEKFPDITNV 220
>gi|18411785|ref|NP_567219.1| NifU-like protein 1 [Arabidopsis thaliana]
gi|75163233|sp|Q93W77.1|NIFU1_ARATH RecName: Full=NifU-like protein 1, chloroplastic; Short=AtCNfu1;
Short=AtCnfU-IVb; Flags: Precursor
gi|14517434|gb|AAK62607.1| AT4g01940/T7B11_20 [Arabidopsis thaliana]
gi|15215670|gb|AAK91380.1| AT4g01940/T7B11_20 [Arabidopsis thaliana]
gi|20908090|gb|AAM26728.1| AT4g01940/T7B11_20 [Arabidopsis thaliana]
gi|28207816|emb|CAD55558.1| NFU1 protein [Arabidopsis thaliana]
gi|332656703|gb|AEE82103.1| NifU-like protein 1 [Arabidopsis thaliana]
Length = 231
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 92/147 (62%), Gaps = 3/147 (2%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA LT +N++ VL+++RP+LISDGGNV + ++ VV LKLQGAC SCPSS TM M
Sbjct: 79 SAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTM 138
Query: 136 GIERRLMEKIPEIVA-VESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDE 194
GIER L EK + + + V DEE ++ E + L+ +RP + GGS+E+++++
Sbjct: 139 GIERVLKEKFGDALKDIRQVFDEEVK-QITVEAVNAHLDILRP-AIKNYGGSVEVLSVEG 196
Query: 195 PIVKVRITGPAAGVMTVRVAVTQKLRE 221
V+ GP + M ++ A+ +K ++
Sbjct: 197 EDCVVKYVGPESIGMGIQAAIKEKFKD 223
>gi|254430627|ref|ZP_05044330.1| NifU domain protein [Cyanobium sp. PCC 7001]
gi|197625080|gb|EDY37639.1| NifU domain protein [Cyanobium sp. PCC 7001]
Length = 88
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 60/73 (82%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
LT EN+E LDE+RPYL++DGGNV + EIDG +V+++LQGACGSCPSS MT+KMGIER+L
Sbjct: 15 LTIENVERTLDELRPYLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKL 74
Query: 142 MEKIPEIVAVESV 154
E IPE+ V V
Sbjct: 75 REAIPEVSEVVQV 87
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQK 218
L EN+E+ L+E+RPYL+ A GG++E+V ID PIVKVR+ G + MT+++ + +K
Sbjct: 15 LTIENVERTLDELRPYLM-ADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERK 73
Query: 219 LREKIPAIAAV 229
LRE IP ++ V
Sbjct: 74 LREAIPEVSEV 84
>gi|352096338|ref|ZP_08957218.1| nitrogen-fixing NifU domain-containing protein [Synechococcus sp.
WH 8016]
gi|351677032|gb|EHA60183.1| nitrogen-fixing NifU domain-containing protein [Synechococcus sp.
WH 8016]
Length = 81
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 62/75 (82%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E VLDE+RP+L++DGGNV + EIDG +V+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 MALTNENVEKVLDELRPFLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAVESV 154
++ E IPE+ V V
Sbjct: 66 KMRESIPEVSEVVQV 80
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+ L EN+EKVL+E+RP+L+ A GG++E+V ID PIVKVR+ G + MT+++ +
Sbjct: 6 MALTNENVEKVLDELRPFLM-ADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIE 64
Query: 217 QKLREKIPAIAAV 229
+K+RE IP ++ V
Sbjct: 65 RKMRESIPEVSEV 77
>gi|318040472|ref|ZP_07972428.1| NifU-like protein [Synechococcus sp. CB0101]
Length = 96
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 60/73 (82%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
LT EN+E LDE+RPYL++DGGNV + EIDG +V+++LQGACGSCPSS MT+KMGIER+L
Sbjct: 23 LTIENVERTLDELRPYLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKL 82
Query: 142 MEKIPEIVAVESV 154
E IPE+ V V
Sbjct: 83 REAIPEVSEVVQV 95
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQK 218
L EN+E+ L+E+RPYL+ A GG++E+V ID PIVKVR+ G + MT+++ + +K
Sbjct: 23 LTIENVERTLDELRPYLM-ADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERK 81
Query: 219 LREKIPAIAAV 229
LRE IP ++ V
Sbjct: 82 LREAIPEVSEV 92
>gi|384249933|gb|EIE23413.1| NifU-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 420
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 105/174 (60%), Gaps = 14/174 (8%)
Query: 63 ARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGA 122
AR +V +++ A LT E++ + LDE+RPYLI+DGGNV + I VV L+LQGA
Sbjct: 256 ARASVHRSIGDSAPAETPDLTPESVNAALDEVRPYLIADGGNVEVASISDGVVYLRLQGA 315
Query: 123 CGSCPSSVMTMKMGIERRLM----EKIPEIVAVESVADEETGLELNEENIEKVLEEIRPY 178
CG+CPSS TMKMGIER L +K+ ++ V++ + T +L +++ L+ +RP
Sbjct: 316 CGTCPSSAGTMKMGIERALQGAFGDKLKGVLQVDATS---TASDL--ASVDAHLDMLRP- 369
Query: 179 LVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
+ + G S++++++ + KV+ GP M V+ A+ ++K P I V+L+
Sbjct: 370 AIASYGASVQVLSVSGGVCKVQFGGPPPIGMGVQAAI----KDKFPDIKTVELV 419
>gi|33866219|ref|NP_897778.1| NifU-like protein [Synechococcus sp. WH 8102]
gi|78212340|ref|YP_381119.1| NifU-like protein [Synechococcus sp. CC9605]
gi|33639194|emb|CAE08202.1| NifU-like protein [Synechococcus sp. WH 8102]
gi|78196799|gb|ABB34564.1| NifU-like protein [Synechococcus sp. CC9605]
Length = 81
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 62/75 (82%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E VLDE+RP+L++DGGNV + E+DG +V+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 MALTLENVEKVLDELRPFLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAVESV 154
++ E IPE+ V V
Sbjct: 66 KMRESIPEVSEVVQV 80
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 52/73 (71%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+ L EN+EKVL+E+RP+L+ A GG++E+V +D PIVKVR+ G + MT+++ +
Sbjct: 6 MALTLENVEKVLDELRPFLM-ADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMGIE 64
Query: 217 QKLREKIPAIAAV 229
+K+RE IP ++ V
Sbjct: 65 RKMRESIPEVSEV 77
>gi|90655381|gb|ABD96222.1| NifU-like protein [uncultured marine type-A Synechococcus GOM 3M9]
Length = 81
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 62/75 (82%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E VLDE+RP+L++DGGNV + E+DG +V+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 MALTHENVEKVLDELRPFLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAVESV 154
++ E IPE+ V V
Sbjct: 66 KMREAIPEVSEVVQV 80
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 52/73 (71%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+ L EN+EKVL+E+RP+L+ A GG++E+V +D PIVKVR+ G + MT+++ +
Sbjct: 6 MALTHENVEKVLDELRPFLM-ADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMGIE 64
Query: 217 QKLREKIPAIAAV 229
+K+RE IP ++ V
Sbjct: 65 RKMREAIPEVSEV 77
>gi|148241647|ref|YP_001226804.1| NifU-like protein [Synechococcus sp. RCC307]
gi|147849957|emb|CAK27451.1| NifU-like protein [Synechococcus sp. RCC307]
Length = 88
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 60/73 (82%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
LT EN+E LDE+RP+L++DGGNV + EIDG +V+++LQGACGSCPSS MT+KMGIER+L
Sbjct: 15 LTLENVERTLDELRPFLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERKL 74
Query: 142 MEKIPEIVAVESV 154
E IPE+ V V
Sbjct: 75 REAIPEVSEVVQV 87
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 5/71 (7%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQK 218
L EN+E+ L+E+RP+L+ A GG++E+V ID PIVKVR+ G + MT+++ + +K
Sbjct: 15 LTLENVERTLDELRPFLM-ADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIERK 73
Query: 219 LREKIPAIAAV 229
LRE IP ++ V
Sbjct: 74 LREAIPEVSEV 84
>gi|78185152|ref|YP_377587.1| NifU-like protein [Synechococcus sp. CC9902]
gi|78169446|gb|ABB26543.1| NifU-like protein [Synechococcus sp. CC9902]
Length = 81
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 62/75 (82%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT +N+E VLDE+RP+L++DGGNV + EIDG +V+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 MALTLDNVEKVLDELRPFLMADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAVESV 154
++ E IPE+ V V
Sbjct: 66 KMRESIPEVSEVVQV 80
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 52/73 (71%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+ L +N+EKVL+E+RP+L+ A GG++E+V ID PIVKVR+ G + MT+++ +
Sbjct: 6 MALTLDNVEKVLDELRPFLM-ADGGNVEVVEIDGPIVKVRLQGACGSCPSSTMTLKMGIE 64
Query: 217 QKLREKIPAIAAV 229
+K+RE IP ++ V
Sbjct: 65 RKMRESIPEVSEV 77
>gi|449436401|ref|XP_004135981.1| PREDICTED: nifU-like protein 1, chloroplastic-like [Cucumis
sativus]
gi|449515245|ref|XP_004164660.1| PREDICTED: nifU-like protein 1, chloroplastic-like [Cucumis
sativus]
Length = 220
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 92/155 (59%), Gaps = 7/155 (4%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA + LT N++ VL+++RPYLI+DGGNV + ++ VV LKL GACGSCPSS TMKM
Sbjct: 68 SAQKFELTIGNVDLVLEDVRPYLIADGGNVDVVSVEDGVVSLKLVGACGSCPSSTTTMKM 127
Query: 136 GIERRLMEKIPEIVA-VESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDE 194
GIER L EK + V + V DEE E E + L+ +RP + GGS+E+++I+
Sbjct: 128 GIERVLKEKFGDSVKEICQVYDEEPK-ETTPEAVNSHLDILRP-AIRNYGGSVEVISING 185
Query: 195 PIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAV 229
V+ GP ++ V ++E+ P I V
Sbjct: 186 GDCLVKYEGPE----SIGTGVKAAIKERFPDITNV 216
>gi|260436644|ref|ZP_05790614.1| NifU domain protein [Synechococcus sp. WH 8109]
gi|260414518|gb|EEX07814.1| NifU domain protein [Synechococcus sp. WH 8109]
Length = 76
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 62/75 (82%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT EN+E VLDE+RP+L++DGGNV + E+DG +V+++LQGACGSCPSS MT+KMGIER
Sbjct: 1 MALTLENVEKVLDELRPFLMADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMGIER 60
Query: 140 RLMEKIPEIVAVESV 154
++ E IPE+ V V
Sbjct: 61 KMRESIPEVSEVVQV 75
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 52/73 (71%), Gaps = 5/73 (6%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+ L EN+EKVL+E+RP+L+ A GG++E+V +D PIVKVR+ G + MT+++ +
Sbjct: 1 MALTLENVEKVLDELRPFLM-ADGGNVEVVELDGPIVKVRLQGACGSCPSSTMTLKMGIE 59
Query: 217 QKLREKIPAIAAV 229
+K+RE IP ++ V
Sbjct: 60 RKMRESIPEVSEV 72
>gi|33239869|ref|NP_874811.1| NifU-like protein [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33237395|gb|AAP99463.1| Thioredoxin family protein [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 81
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 60/72 (83%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ LT N+E VLDE+RP+L++DGGNV + EIDG +V+++LQGACGSCPSS MT+KMGIER
Sbjct: 6 MALTHANVEKVLDELRPFLMADGGNVEIVEIDGPIVKVRLQGACGSCPSSTMTLKMGIER 65
Query: 140 RLMEKIPEIVAV 151
+L E IPE+ V
Sbjct: 66 KLCEMIPEVSEV 77
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
Query: 157 EETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVR 212
E + L N+EKVL+E+RP+L+ A GG++E+V ID PIVKVR+ G + MT++
Sbjct: 2 ENQTMALTHANVEKVLDELRPFLM-ADGGNVEIVEIDGPIVKVRLQGACGSCPSSTMTLK 60
Query: 213 VAVTQKLREKIPAIAAV 229
+ + +KL E IP ++ V
Sbjct: 61 MGIERKLCEMIPEVSEV 77
>gi|302784600|ref|XP_002974072.1| hypothetical protein SELMODRAFT_58377 [Selaginella moellendorffii]
gi|300158404|gb|EFJ25027.1| hypothetical protein SELMODRAFT_58377 [Selaginella moellendorffii]
Length = 162
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 93/157 (59%), Gaps = 10/157 (6%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA TAEN++ VLDE+RPYL++DGGNVA+ + V L+LQGACG+CPSS TMKM
Sbjct: 13 SAETYDFTAENVDKVLDEVRPYLVADGGNVAVVSVADGTVSLELQGACGTCPSSTSTMKM 72
Query: 136 GIERRLMEKIPEIVAVESVAD-EETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID- 193
GIER L EK + AV+ V D + L E + ++ +R + G GG ++L T+D
Sbjct: 73 GIERVLREKFGD--AVKEVVDINRPSVTLTFEALNGQIDMLRSAIEG-YGGVVQLATVDP 129
Query: 194 -EPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAV 229
+ +++ GP + ++ A+ R+K P + V
Sbjct: 130 AKGECQIKYKGPVPLGLGIKAAI----RDKFPELNVV 162
>gi|388501170|gb|AFK38651.1| unknown [Lotus japonicus]
Length = 211
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 93/157 (59%), Gaps = 7/157 (4%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA ++ LTA N++ VL+++RPYLISDGGNV + ++ V+ LKLQ AC SCPSS TMK+
Sbjct: 57 SAAKIDLTAPNVDLVLEDVRPYLISDGGNVEVVSVENGVISLKLQRACESCPSSTTTMKL 116
Query: 136 GIERRLMEKIPEIVA-VESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDE 194
GIER L EK + V + V DEE E E + LE +RP + GGS+++++++
Sbjct: 117 GIERVLKEKFGDAVKDIVQVYDEEPK-ETTVEAVNNHLEILRP-AIKNFGGSVQVLSVEG 174
Query: 195 PIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQL 231
V GP + ++ A+ +EK P I V
Sbjct: 175 SDCHVDYVGPDSIGSGIKAAI----KEKFPDILNVTF 207
>gi|308807973|ref|XP_003081297.1| nitrogen fixation NifU-like family protein (ISS) [Ostreococcus
tauri]
gi|116059759|emb|CAL55466.1| nitrogen fixation NifU-like family protein (ISS) [Ostreococcus
tauri]
Length = 186
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 98/164 (59%), Gaps = 16/164 (9%)
Query: 68 IKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCP 127
+ AV + D A L LT EN+++ LDE+RPYLI+DGGNV L ID ++ ++L GACG+C
Sbjct: 25 MDAVESAD-APTLELTMENVDAALDEVRPYLIADGGNVELVTIDDGMIVVRLNGACGTCA 83
Query: 128 SSVMTMKMGIERRLMEK----IPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAA 183
SS TMK GIE+ L +K + E+V V A+E T +E E ++EK+ + I Y
Sbjct: 84 SSTATMKGGIEKLLKQKFGAAVDEVVNVSGDAEEMT-VETLEAHLEKLRKSITSY----- 137
Query: 184 GGSLELVTIDE-PIVKVRITGPAAGVMTVRVAVTQKLREKIPAI 226
GG + + ++D I +R GP A + ++ Q L++K P +
Sbjct: 138 GGEVSVESLDSRGICILRFKGPQA----LAFSIAQALKQKFPLV 177
>gi|37522446|ref|NP_925823.1| hypothetical protein gsl2877 [Gloeobacter violaceus PCC 7421]
gi|35213447|dbj|BAC90818.1| gsl2877 [Gloeobacter violaceus PCC 7421]
Length = 85
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 60/75 (80%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L L +N+E VLDE+RPYL+SDGGNV L EI+G +V+L+LQGACGSCPSS T+K+GIER
Sbjct: 10 LELNRDNVELVLDELRPYLMSDGGNVELVEIEGPIVKLRLQGACGSCPSSTYTLKLGIER 69
Query: 140 RLMEKIPEIVAVESV 154
R+ E IP + VE V
Sbjct: 70 RMRELIPAVAEVEQV 84
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 56/78 (71%), Gaps = 5/78 (6%)
Query: 157 EETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVR 212
E+ LELN +N+E VL+E+RPYL+ + GG++ELV I+ PIVK+R+ G + T++
Sbjct: 6 EDEVLELNRDNVELVLDELRPYLM-SDGGNVELVEIEGPIVKLRLQGACGSCPSSTYTLK 64
Query: 213 VAVTQKLREKIPAIAAVQ 230
+ + +++RE IPA+A V+
Sbjct: 65 LGIERRMRELIPAVAEVE 82
>gi|78100772|pdb|1TH5|A Chain A, Solution Structure Of C-Terminal Domain Of Nifu-Like
Protein From Oryza Sativa
Length = 74
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 59/72 (81%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLR 220
LELNEEN+EKVL EIRPYL G GG L+ + I PIVKVR+TGPAA V TVR+AV++KLR
Sbjct: 2 LELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKVRLTGPAAVVRTVRIAVSKKLR 61
Query: 221 EKIPAIAAVQLL 232
EKIP+I VQLL
Sbjct: 62 EKIPSIQIVQLL 73
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 7/75 (9%)
Query: 80 LPLTAENIESVLDEIRPYLI-SDGGNVALHEIDGNVVRLKLQGACGSCPSSVM-TMKMGI 137
L L EN+E VL+EIRPYL + GG + I G +V+++L G P++V+ T+++ +
Sbjct: 2 LELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKVRLTG-----PAAVVRTVRIAV 56
Query: 138 ERRLMEKIPEIVAVE 152
++L EKIP I V+
Sbjct: 57 SKKLREKIPSIQIVQ 71
>gi|351727691|ref|NP_001238705.1| uncharacterized protein LOC100527356 [Glycine max]
gi|255632161|gb|ACU16433.1| unknown [Glycine max]
Length = 221
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 13/160 (8%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA + LTA N++ VLD++RPYLI+DGGNV + ++ VV L+L+GAC SCPSS TM M
Sbjct: 67 SAKKFDLTASNVDLVLDDVRPYLIADGGNVDVVSVEDGVVSLRLEGACESCPSSTTTMTM 126
Query: 136 GIERRLMEK----IPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVT 191
GIER L EK + +I V ET +E ++E + I+ Y GGS+E+V+
Sbjct: 127 GIERVLKEKFGDAVKDIRQVYLTEPRETTVEAVNNHLEILRPAIKNY-----GGSVEVVS 181
Query: 192 IDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQL 231
++ +V+ GP + + + ++EK P I V
Sbjct: 182 VEGGECEVKYVGPDS----IGSGIKATIKEKFPDILNVTF 217
>gi|224130940|ref|XP_002320962.1| predicted protein [Populus trichocarpa]
gi|222861735|gb|EEE99277.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA + L +N++ VL+E+RPYLISDGGNV + ++ V+ LKLQGACG+C SS TMKM
Sbjct: 68 SAQQFELNPQNVDLVLEEVRPYLISDGGNVDVVSVEDGVITLKLQGACGNCASSETTMKM 127
Query: 136 GIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEP 195
GIER L EK + V E E E I L+ +RP + GGS+E+++++
Sbjct: 128 GIERVLKEKFGDAVQDIRQLSFEEPKETTVEAINDHLDILRPA-IKNFGGSVEVLSVENG 186
Query: 196 IVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAV 229
+V TGP + ++ A+ +EK P I V
Sbjct: 187 GCRVEYTGPESIGSGIKAAI----KEKFPDIVDV 216
>gi|302770961|ref|XP_002968899.1| hypothetical protein SELMODRAFT_16556 [Selaginella moellendorffii]
gi|300163404|gb|EFJ30015.1| hypothetical protein SELMODRAFT_16556 [Selaginella moellendorffii]
Length = 170
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 87/143 (60%), Gaps = 6/143 (4%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
TAEN++ VLDE+RPYL++DGGNVA+ + V L+LQGACG+CPSS TMKMGIER L
Sbjct: 30 FTAENVDKVLDEVRPYLVADGGNVAVVSVADGTVSLELQGACGTCPSSTSTMKMGIERVL 89
Query: 142 MEKIPEIVAVESVAD-EETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID--EPIVK 198
EK + AV+ V D + L E + ++ +R + G GG ++L T+D + +
Sbjct: 90 REKFGD--AVKEVVDINRPSVTLTFEALNGQIDMLRSAIEG-YGGVVQLATVDPAKGECQ 146
Query: 199 VRITGPAAGVMTVRVAVTQKLRE 221
++ GP + ++ A+ K E
Sbjct: 147 IKYKGPVPLGLGIKAAIRDKFPE 169
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+ EN++KVL+E+RPYLV A GG++ +V++ + V + + G + T+++ +
Sbjct: 28 YDFTAENVDKVLDEVRPYLV-ADGGNVAVVSVADGTVSLELQGACGTCPSSTSTMKMGIE 86
Query: 217 QKLREKI 223
+ LREK
Sbjct: 87 RVLREKF 93
>gi|302784594|ref|XP_002974069.1| hypothetical protein SELMODRAFT_16558 [Selaginella moellendorffii]
gi|300158401|gb|EFJ25024.1| hypothetical protein SELMODRAFT_16558 [Selaginella moellendorffii]
Length = 170
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 6/149 (4%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA TAEN++ VLDE+RPYL++DGGNVA+ + V L+LQ ACG+CPSS TMKM
Sbjct: 24 SAETYDFTAENVDKVLDEVRPYLVADGGNVAVVSVADGTVSLELQRACGTCPSSTSTMKM 83
Query: 136 GIERRLMEKIPEIVAVESVAD-EETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID- 193
GIER L EK + AV+ V D + L E + ++ +R + G GG ++L T+D
Sbjct: 84 GIERVLREKFGD--AVKEVVDINRPSVTLTFEALNGQIDMLRSAIEG-YGGVVQLATVDP 140
Query: 194 -EPIVKVRITGPAAGVMTVRVAVTQKLRE 221
+ +++ GP + ++ A+ K E
Sbjct: 141 AKGECQIKYKGPVPLSLGIKAAIRDKFPE 169
>gi|443476908|ref|ZP_21066789.1| nitrogen-fixing NifU domain-containing protein [Pseudanabaena
biceps PCC 7429]
gi|443018038|gb|ELS32358.1| nitrogen-fixing NifU domain-containing protein [Pseudanabaena
biceps PCC 7429]
Length = 78
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 55/60 (91%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
LT EN+E+VLDE+RPYL+SDGGNV L +I+G +VRL+LQGACGSCPSS MT++MGIER+L
Sbjct: 5 LTRENVENVLDELRPYLMSDGGNVELVDIEGPIVRLRLQGACGSCPSSAMTLRMGIERKL 64
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 5/62 (8%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQK 218
L EN+E VL+E+RPYL+ + GG++ELV I+ PIV++R+ G + MT+R+ + +K
Sbjct: 5 LTRENVENVLDELRPYLM-SDGGNVELVDIEGPIVRLRLQGACGSCPSSAMTLRMGIERK 63
Query: 219 LR 220
L+
Sbjct: 64 LK 65
>gi|242067733|ref|XP_002449143.1| hypothetical protein SORBIDRAFT_05g005735 [Sorghum bicolor]
gi|241934986|gb|EES08131.1| hypothetical protein SORBIDRAFT_05g005735 [Sorghum bicolor]
Length = 60
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Query: 110 IDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVA-DEETGLELN 164
IDGNVVRLKLQ ACGSCP+SV TMKMGIERRL EKIPEIVAVE +A DEETGLEL
Sbjct: 3 IDGNVVRLKLQEACGSCPASVTTMKMGIERRLKEKIPEIVAVEPIADDEETGLELK 58
>gi|307105277|gb|EFN53527.1| hypothetical protein CHLNCDRAFT_58507 [Chlorella variabilis]
Length = 496
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 91/154 (59%), Gaps = 7/154 (4%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L +T E +++ LD++RPYLI+DGGNV + ++ V L+LQGACG+CPSS TMKMGIER
Sbjct: 337 LEMTVEAVDAALDDVRPYLIADGGNVDVVAVEDGRVFLQLQGACGTCPSSTATMKMGIER 396
Query: 140 RLMEKI-PEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVK 198
L ++V V V +E E ++ L +R VGA GGS+E+V +++ +
Sbjct: 397 SLKAAFGKQLVEVLQVGGQEDN-RATAEGVDMHLNMLRG-AVGAYGGSVEVVGVEQGVCT 454
Query: 199 VRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
+ GP A +R AV R+K P + V ++
Sbjct: 455 LHYKGPEAIGYGLRAAV----RDKFPDLVEVLMM 484
>gi|325105698|ref|YP_004275352.1| nitrogen-fixing NifU domain-containing protein [Pedobacter saltans
DSM 12145]
gi|324974546|gb|ADY53530.1| nitrogen-fixing NifU domain protein [Pedobacter saltans DSM 12145]
Length = 89
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
+E LD IRPYL++DGGNV++ EI + NVV+LKL GACGSCP S MT+K GIE+ + + +
Sbjct: 11 VERALDTIRPYLVADGGNVSVEEITNDNVVKLKLLGACGSCPMSFMTLKAGIEQAVKKAV 70
Query: 146 PEIVAVESVADEETG 160
P I AVE++ EE G
Sbjct: 71 PSITAVEAINLEEAG 85
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 168 IEKVLEEIRPYLVGAAGG-SLELVTIDEPIVKVRITGPAA----GVMTVRVAVTQKLREK 222
+E+ L+ IRPYLV G S+E +T D +VK+++ G MT++ + Q +++
Sbjct: 11 VERALDTIRPYLVADGGNVSVEEITNDN-VVKLKLLGACGSCPMSFMTLKAGIEQAVKKA 69
Query: 223 IPAIAAVQ 230
+P+I AV+
Sbjct: 70 VPSITAVE 77
>gi|452991063|emb|CCQ97689.1| Nitrogen-fixing NifU domain protein [Clostridium ultunense Esp]
Length = 75
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 55/67 (82%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E +E VLD++RP++ SDGG+V L +++ +V+L+L GACGSCPSS +T+K GIER LMEK
Sbjct: 5 EKVEEVLDKLRPFIQSDGGDVELLDVEDGIVKLRLLGACGSCPSSTITLKAGIERALMEK 64
Query: 145 IPEIVAV 151
+PE+V V
Sbjct: 65 VPEVVEV 71
Score = 43.1 bits (100), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
E +E+VL+++RP+ + + GG +EL+ +++ IVK+R+ G + +T++ + + L E
Sbjct: 5 EKVEEVLDKLRPF-IQSDGGDVELLDVEDGIVKLRLLGACGSCPSSTITLKAGIERALME 63
Query: 222 KIPAIAAV 229
K+P + V
Sbjct: 64 KVPEVVEV 71
>gi|4558563|gb|AAD22656.1|AC007138_20 putative NifU-like metallocluster assembly factor [Arabidopsis
thaliana]
gi|7268578|emb|CAB80687.1| putative NifU-like metallocluster assembly factor [Arabidopsis
thaliana]
Length = 174
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA LT +N++ VL+++RP+LISDGGNV + ++ VV LKLQGAC SCPSS TM M
Sbjct: 78 SAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTM 137
Query: 136 GIERRLMEKIPEIVA-VESVADEE 158
GIER L EK + + + V DEE
Sbjct: 138 GIERVLKEKFGDALKDIRQVFDEE 161
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVT 216
+L +N++ VLE++RP+L+ + GG++++V++++ +V +++ G + T+ + +
Sbjct: 82 FDLTPQNVDLVLEDVRPFLI-SDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIE 140
Query: 217 QKLREKI 223
+ L+EK
Sbjct: 141 RVLKEKF 147
>gi|219113897|ref|XP_002176135.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402927|gb|EEC42886.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 77
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 83 TAENIESVLDEIRPYLISDGGNVALHEIDGN--VVRLKLQGACGSCPSSVMTMKMGIERR 140
T + ++ VLDE+RPYLISDGGNV++ +D + V LKL+GACGSC SS +TM+MGIER
Sbjct: 1 TIDGVDKVLDEVRPYLISDGGNVSVESVDADSQTVYLKLEGACGSCSSSTVTMQMGIERV 60
Query: 141 LMEKIPEIVAVESVADE 157
L EK P + V V D+
Sbjct: 61 LKEKYPNLREVLQVEDD 77
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGG-SLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLR 220
+ ++KVL+E+RPYL+ G S+E V D V +++ G ++ +T+++ + + L+
Sbjct: 3 DGVDKVLDEVRPYLISDGGNVSVESVDADSQTVYLKLEGACGSCSSSTVTMQMGIERVLK 62
Query: 221 EKIPAIAAV 229
EK P + V
Sbjct: 63 EKYPNLREV 71
>gi|224145825|ref|XP_002325778.1| predicted protein [Populus trichocarpa]
gi|222862653|gb|EEF00160.1| predicted protein [Populus trichocarpa]
Length = 55
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/50 (90%), Positives = 48/50 (96%)
Query: 183 AGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
+GGSLELV I+EPIVKVR+TGPAAGVMTVRVAVTQKLREKIPAIAAV LL
Sbjct: 6 SGGSLELVAIEEPIVKVRLTGPAAGVMTVRVAVTQKLREKIPAIAAVHLL 55
>gi|65316943|ref|ZP_00389902.1| COG0694: Thioredoxin-like proteins and domains [Bacillus anthracis
str. A2012]
Length = 95
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 61/83 (73%)
Query: 78 IELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
+E P E + VLD++RP+L+ DGG+V L +I+ +V+L+L GACGSCPSS +T+K GI
Sbjct: 1 MENPHMQEQVLEVLDKLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGI 60
Query: 138 ERRLMEKIPEIVAVESVADEETG 160
ER L+E++P ++ VE V ++G
Sbjct: 61 ERALLEEVPGVIEVEQVFXSKSG 83
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLR 220
+E + +VL+++RP+L+ GG +ELV I+E IVK+R+ G + +T++ + + L
Sbjct: 7 QEQVLEVLDKLRPFLL-RDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGIERALL 65
Query: 221 EKIPAIAAVQ 230
E++P + V+
Sbjct: 66 EEVPGVIEVE 75
>gi|255529963|ref|YP_003090335.1| nitrogen-fixing NifU domain-containing protein [Pedobacter
heparinus DSM 2366]
gi|255342947|gb|ACU02273.1| nitrogen-fixing NifU domain protein [Pedobacter heparinus DSM 2366]
Length = 81
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEID-GNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E L+ IRPYLI+DGG+VA+ EI NVVRLKL G CGSC S MTMK GIE+ +M+
Sbjct: 5 EQVEQALETIRPYLIADGGDVAIEEITPENVVRLKLLGNCGSCKMSFMTMKAGIEQAIMK 64
Query: 144 KIPEIVAVESV 154
+P+I AVE+V
Sbjct: 65 SVPQITAVEAV 75
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTID-EPIVKVRITGPAA----GVMTVRVAVTQKLR 220
E +E+ LE IRPYL+ A GG + + I E +V++++ G MT++ + Q +
Sbjct: 5 EQVEQALETIRPYLI-ADGGDVAIEEITPENVVRLKLLGNCGSCKMSFMTMKAGIEQAIM 63
Query: 221 EKIPAIAAVQ 230
+ +P I AV+
Sbjct: 64 KSVPQITAVE 73
>gi|365155028|ref|ZP_09351422.1| putative nitrogen fixation protein yutI [Bacillus smithii
7_3_47FAA]
gi|363628815|gb|EHL79522.1| putative nitrogen fixation protein yutI [Bacillus smithii
7_3_47FAA]
Length = 78
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 55/70 (78%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E ++ VLD++RP+L+ DGG+ L +++ +V+L+L GACGSCPSS +T+K GIER L+E+
Sbjct: 8 EQVQEVLDKLRPFLLRDGGDCQLMDVEDGIVKLRLLGACGSCPSSTITLKAGIERALLEE 67
Query: 145 IPEIVAVESV 154
+P IV VE V
Sbjct: 68 VPGIVEVEQV 77
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLR 220
+E +++VL+++RP+L+ GG +L+ +++ IVK+R+ G + +T++ + + L
Sbjct: 7 KEQVQEVLDKLRPFLL-RDGGDCQLMDVEDGIVKLRLLGACGSCPSSTITLKAGIERALL 65
Query: 221 EKIPAIAAVQ 230
E++P I V+
Sbjct: 66 EEVPGIVEVE 75
>gi|2688826|gb|AAB88877.1| putative NifU protein [Prunus armeniaca]
Length = 76
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
LT N++ VL+++RPYLI+DGG+V + ++ VV LKLQGACGSCPSS TMKMGIER L
Sbjct: 2 LTVPNVDLVLEDVRPYLIADGGDVDVVSVEDGVVSLKLQGACGSCPSSTTTMKMGIERVL 61
Query: 142 MEKIPE 147
EK +
Sbjct: 62 KEKFGD 67
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 162 ELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQ 217
EL N++ VLE++RPYL+ A GG +++V++++ +V +++ G + T+++ + +
Sbjct: 1 ELTVPNVDLVLEDVRPYLI-ADGGDVDVVSVEDGVVSLKLQGACGSCPSSTTTMKMGIER 59
Query: 218 KLREKI 223
L+EK
Sbjct: 60 VLKEKF 65
>gi|152977236|ref|YP_001376753.1| NifU domain-containing protein [Bacillus cytotoxicus NVH 391-98]
gi|152025988|gb|ABS23758.1| nitrogen-fixing NifU domain protein [Bacillus cytotoxicus NVH
391-98]
Length = 78
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 58/77 (75%)
Query: 78 IELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
+E P E + VLD++RP+L+ DGG+V L +I+ +V+L+L GACGSCPSS +T+K GI
Sbjct: 1 MENPNMQEQVLEVLDKLRPFLLRDGGDVELVDIEDGIVKLRLMGACGSCPSSTITLKAGI 60
Query: 138 ERRLMEKIPEIVAVESV 154
ER L+E++P ++ VE V
Sbjct: 61 ERALLEEVPGVIEVEQV 77
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLR 220
+E + +VL+++RP+L+ GG +ELV I++ IVK+R+ G + +T++ + + L
Sbjct: 7 QEQVLEVLDKLRPFLL-RDGGDVELVDIEDGIVKLRLMGACGSCPSSTITLKAGIERALL 65
Query: 221 EKIPAIAAVQ 230
E++P + V+
Sbjct: 66 EEVPGVIEVE 75
>gi|189426530|ref|YP_001953707.1| nitrogen-fixing NifU domain-containing protein [Geobacter lovleyi
SZ]
gi|189422789|gb|ACD97187.1| nitrogen-fixing NifU domain protein [Geobacter lovleyi SZ]
Length = 74
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +++VLD++RP L DGG+V L E+ + +V++KLQGACGSCP S MT+KMGIE+ + E
Sbjct: 3 EKVQAVLDQVRPMLQRDGGDVELIEVTADGIVKVKLQGACGSCPMSTMTLKMGIEKAIKE 62
Query: 144 KIPEIVAVESV 154
+IPEIV V+ V
Sbjct: 63 QIPEIVEVQQV 73
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTID-EPIVKVRITGPAA----GVMTVRVAVTQKLR 220
E ++ VL+++RP L GG +EL+ + + IVKV++ G MT+++ + + ++
Sbjct: 3 EKVQAVLDQVRPML-QRDGGDVELIEVTADGIVKVKLQGACGSCPMSTMTLKMGIEKAIK 61
Query: 221 EKIPAIAAVQ 230
E+IP I VQ
Sbjct: 62 EQIPEIVEVQ 71
>gi|392957154|ref|ZP_10322679.1| nitrogen fixation protein NifU [Bacillus macauensis ZFHKF-1]
gi|391877056|gb|EIT85651.1| nitrogen fixation protein NifU [Bacillus macauensis ZFHKF-1]
Length = 79
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 56/70 (80%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E +E VLD++RP+L+ DGG+V L +I+ +V+++L GACGSCPSS +T+K GIER L+E+
Sbjct: 9 EQVEEVLDKLRPFLLRDGGDVELVDIEEGIVKVRLMGACGSCPSSTITLKAGIERALLEE 68
Query: 145 IPEIVAVESV 154
+P +V +E V
Sbjct: 69 VPGVVELEQV 78
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
E +E+VL+++RP+L+ GG +ELV I+E IVKVR+ G + +T++ + + L E
Sbjct: 9 EQVEEVLDKLRPFLL-RDGGDVELVDIEEGIVKVRLMGACGSCPSSTITLKAGIERALLE 67
Query: 222 KIPAIAAVQ 230
++P + ++
Sbjct: 68 EVPGVVELE 76
>gi|30022992|ref|NP_834623.1| NifU protein [Bacillus cereus ATCC 14579]
gi|30264992|ref|NP_847369.1| NifU domain-containing protein [Bacillus anthracis str. Ames]
gi|42784132|ref|NP_981379.1| NifU domain-containing protein [Bacillus cereus ATCC 10987]
gi|47530492|ref|YP_021841.1| NifU domain-containing protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|47566983|ref|ZP_00237700.1| NifU protein-related protein [Bacillus cereus G9241]
gi|49187811|ref|YP_031064.1| NifU domain-containing protein [Bacillus anthracis str. Sterne]
gi|49481022|ref|YP_038969.1| NifU domain-containing protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52140580|ref|YP_086250.1| NifU domain-containing protein [Bacillus cereus E33L]
gi|75758910|ref|ZP_00739021.1| NifU protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|118480036|ref|YP_897187.1| NifU-like domain-containing protein [Bacillus thuringiensis str. Al
Hakam]
gi|163942665|ref|YP_001647549.1| NifU domain-containing protein [Bacillus weihenstephanensis KBAB4]
gi|165870953|ref|ZP_02215605.1| nifU domain protein [Bacillus anthracis str. A0488]
gi|167634861|ref|ZP_02393179.1| nifU domain protein [Bacillus anthracis str. A0442]
gi|167639907|ref|ZP_02398175.1| nifU domain protein [Bacillus anthracis str. A0193]
gi|170685656|ref|ZP_02876879.1| nifU domain protein [Bacillus anthracis str. A0465]
gi|170706993|ref|ZP_02897450.1| nifU domain protein [Bacillus anthracis str. A0389]
gi|177652329|ref|ZP_02934832.1| nifU domain protein [Bacillus anthracis str. A0174]
gi|190567150|ref|ZP_03020065.1| nifU domain protein [Bacillus anthracis str. Tsiankovskii-I]
gi|196033148|ref|ZP_03100561.1| nifU domain protein [Bacillus cereus W]
gi|196040592|ref|ZP_03107892.1| nifU domain protein [Bacillus cereus NVH0597-99]
gi|196043939|ref|ZP_03111176.1| nifU domain protein [Bacillus cereus 03BB108]
gi|206970391|ref|ZP_03231344.1| nifU domain protein [Bacillus cereus AH1134]
gi|206976476|ref|ZP_03237383.1| nifU domain protein [Bacillus cereus H3081.97]
gi|217962417|ref|YP_002340989.1| nifU domain-containing protein [Bacillus cereus AH187]
gi|218235090|ref|YP_002369752.1| nifU domain protein [Bacillus cereus B4264]
gi|218900105|ref|YP_002448516.1| nifU domain protein [Bacillus cereus G9842]
gi|218906144|ref|YP_002453978.1| nifU domain protein [Bacillus cereus AH820]
gi|222098402|ref|YP_002532460.1| nitrogen-fixing nifu domain protein [Bacillus cereus Q1]
gi|225866921|ref|YP_002752299.1| nifU domain protein [Bacillus cereus 03BB102]
gi|227817723|ref|YP_002817732.1| nifU domain protein [Bacillus anthracis str. CDC 684]
gi|228903455|ref|ZP_04067581.1| hypothetical protein bthur0014_46170 [Bacillus thuringiensis IBL
4222]
gi|228910790|ref|ZP_04074599.1| hypothetical protein bthur0013_49320 [Bacillus thuringiensis IBL
200]
gi|228917578|ref|ZP_04081122.1| hypothetical protein bthur0012_47840 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228923687|ref|ZP_04086965.1| hypothetical protein bthur0011_46620 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228929976|ref|ZP_04092987.1| hypothetical protein bthur0010_46580 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228936248|ref|ZP_04099047.1| hypothetical protein bthur0009_46860 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228942118|ref|ZP_04104658.1| hypothetical protein bthur0008_47490 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228948675|ref|ZP_04110953.1| hypothetical protein bthur0007_47990 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228955216|ref|ZP_04117224.1| hypothetical protein bthur0006_45740 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228961200|ref|ZP_04122821.1| hypothetical protein bthur0005_46480 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228968061|ref|ZP_04129067.1| hypothetical protein bthur0004_48450 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228975048|ref|ZP_04135607.1| hypothetical protein bthur0003_47960 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981687|ref|ZP_04141982.1| hypothetical protein bthur0002_48460 [Bacillus thuringiensis Bt407]
gi|228988194|ref|ZP_04148291.1| hypothetical protein bthur0001_48520 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229014137|ref|ZP_04171258.1| hypothetical protein bmyco0001_45420 [Bacillus mycoides DSM 2048]
gi|229020189|ref|ZP_04176962.1| hypothetical protein bcere0030_46810 [Bacillus cereus AH1273]
gi|229026415|ref|ZP_04182772.1| hypothetical protein bcere0029_46920 [Bacillus cereus AH1272]
gi|229049643|ref|ZP_04194200.1| hypothetical protein bcere0027_46010 [Bacillus cereus AH676]
gi|229062619|ref|ZP_04199928.1| hypothetical protein bcere0026_46850 [Bacillus cereus AH603]
gi|229072441|ref|ZP_04205643.1| hypothetical protein bcere0025_46020 [Bacillus cereus F65185]
gi|229076327|ref|ZP_04209292.1| hypothetical protein bcere0024_46310 [Bacillus cereus Rock4-18]
gi|229082198|ref|ZP_04214662.1| hypothetical protein bcere0023_48160 [Bacillus cereus Rock4-2]
gi|229094055|ref|ZP_04225139.1| hypothetical protein bcere0021_47700 [Bacillus cereus Rock3-42]
gi|229099409|ref|ZP_04230339.1| hypothetical protein bcere0020_46280 [Bacillus cereus Rock3-29]
gi|229105568|ref|ZP_04236202.1| hypothetical protein bcere0019_46970 [Bacillus cereus Rock3-28]
gi|229112395|ref|ZP_04241933.1| hypothetical protein bcere0018_46350 [Bacillus cereus Rock1-15]
gi|229118422|ref|ZP_04247776.1| hypothetical protein bcere0017_46890 [Bacillus cereus Rock1-3]
gi|229124488|ref|ZP_04253673.1| hypothetical protein bcere0016_47720 [Bacillus cereus 95/8201]
gi|229130213|ref|ZP_04259172.1| hypothetical protein bcere0015_46490 [Bacillus cereus BDRD-Cer4]
gi|229141670|ref|ZP_04270200.1| hypothetical protein bcere0013_47600 [Bacillus cereus BDRD-ST26]
gi|229147497|ref|ZP_04275844.1| hypothetical protein bcere0012_46260 [Bacillus cereus BDRD-ST24]
gi|229153141|ref|ZP_04281320.1| hypothetical protein bcere0011_46710 [Bacillus cereus m1550]
gi|229158547|ref|ZP_04286606.1| hypothetical protein bcere0010_47200 [Bacillus cereus ATCC 4342]
gi|229163931|ref|ZP_04291871.1| hypothetical protein bcere0009_46940 [Bacillus cereus R309803]
gi|229169674|ref|ZP_04297374.1| hypothetical protein bcere0007_46180 [Bacillus cereus AH621]
gi|229175651|ref|ZP_04303159.1| hypothetical protein bcere0006_47280 [Bacillus cereus MM3]
gi|229181250|ref|ZP_04308580.1| hypothetical protein bcere0005_45920 [Bacillus cereus 172560W]
gi|229187187|ref|ZP_04314332.1| hypothetical protein bcere0004_47230 [Bacillus cereus BGSC 6E1]
gi|229193231|ref|ZP_04320182.1| hypothetical protein bcere0002_48780 [Bacillus cereus ATCC 10876]
gi|229199099|ref|ZP_04325782.1| hypothetical protein bcere0001_46120 [Bacillus cereus m1293]
gi|229604077|ref|YP_002869195.1| nifU domain protein [Bacillus anthracis str. A0248]
gi|254687285|ref|ZP_05151142.1| nifU domain protein [Bacillus anthracis str. CNEVA-9066]
gi|254725297|ref|ZP_05187080.1| nifU domain protein [Bacillus anthracis str. A1055]
gi|254735378|ref|ZP_05193086.1| nifU domain protein [Bacillus anthracis str. Western North America
USA6153]
gi|254740645|ref|ZP_05198336.1| nifU domain protein [Bacillus anthracis str. Kruger B]
gi|254753093|ref|ZP_05205129.1| nifU domain protein [Bacillus anthracis str. Vollum]
gi|254761435|ref|ZP_05213456.1| nifU domain protein [Bacillus anthracis str. Australia 94]
gi|296505392|ref|YP_003667092.1| NifU protein [Bacillus thuringiensis BMB171]
gi|301056437|ref|YP_003794648.1| nitrogen-fixing NifU domain-containing protein [Bacillus cereus
biovar anthracis str. CI]
gi|365163077|ref|ZP_09359200.1| hypothetical protein HMPREF1014_04663 [Bacillus sp. 7_6_55CFAA_CT2]
gi|375286942|ref|YP_005107381.1| nifU domain-containing protein [Bacillus cereus NC7401]
gi|376268854|ref|YP_005121566.1| NifU-like domain-containing protein [Bacillus cereus F837/76]
gi|384182798|ref|YP_005568560.1| nitrogen-fixing NifU domain-containing protein [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|384189060|ref|YP_005574956.1| NifU protein [Bacillus thuringiensis serovar chinensis CT-43]
gi|386738824|ref|YP_006212005.1| NifU-like domain-containing protein [Bacillus anthracis str. H9401]
gi|402554939|ref|YP_006596210.1| NifU-like domain-containing protein [Bacillus cereus FRI-35]
gi|402563541|ref|YP_006606265.1| NifU-like domain-containing protein [Bacillus thuringiensis HD-771]
gi|407707451|ref|YP_006831036.1| HTH-type transcriptional regulator lrpB [Bacillus thuringiensis
MC28]
gi|410677392|ref|YP_006929763.1| putative nitrogen fixation protein YutI [Bacillus thuringiensis
Bt407]
gi|421507897|ref|ZP_15954814.1| NifU-like domain-containing protein [Bacillus anthracis str. UR-1]
gi|421640015|ref|ZP_16080603.1| NifU-like domain-containing protein [Bacillus anthracis str. BF1]
gi|423355421|ref|ZP_17333045.1| hypothetical protein IAU_03494 [Bacillus cereus IS075]
gi|423363462|ref|ZP_17340960.1| hypothetical protein IC1_05437 [Bacillus cereus VD022]
gi|423368949|ref|ZP_17346380.1| hypothetical protein IC3_04049 [Bacillus cereus VD142]
gi|423375477|ref|ZP_17352814.1| hypothetical protein IC5_04530 [Bacillus cereus AND1407]
gi|423377219|ref|ZP_17354503.1| hypothetical protein IC9_00572 [Bacillus cereus BAG1O-2]
gi|423386457|ref|ZP_17363712.1| hypothetical protein ICE_04202 [Bacillus cereus BAG1X1-2]
gi|423388748|ref|ZP_17365974.1| hypothetical protein ICG_00596 [Bacillus cereus BAG1X1-3]
gi|423394817|ref|ZP_17372018.1| hypothetical protein ICU_00511 [Bacillus cereus BAG2X1-1]
gi|423405676|ref|ZP_17382825.1| hypothetical protein ICY_00361 [Bacillus cereus BAG2X1-3]
gi|423411269|ref|ZP_17388389.1| hypothetical protein IE1_00573 [Bacillus cereus BAG3O-2]
gi|423417125|ref|ZP_17394214.1| hypothetical protein IE3_00597 [Bacillus cereus BAG3X2-1]
gi|423427073|ref|ZP_17404104.1| hypothetical protein IE5_04762 [Bacillus cereus BAG3X2-2]
gi|423432946|ref|ZP_17409950.1| hypothetical protein IE7_04762 [Bacillus cereus BAG4O-1]
gi|423438368|ref|ZP_17415349.1| hypothetical protein IE9_04549 [Bacillus cereus BAG4X12-1]
gi|423440331|ref|ZP_17417237.1| hypothetical protein IEA_00661 [Bacillus cereus BAG4X2-1]
gi|423449520|ref|ZP_17426399.1| hypothetical protein IEC_04128 [Bacillus cereus BAG5O-1]
gi|423451760|ref|ZP_17428613.1| hypothetical protein IEE_00504 [Bacillus cereus BAG5X1-1]
gi|423463394|ref|ZP_17440162.1| hypothetical protein IEK_00581 [Bacillus cereus BAG6O-1]
gi|423471132|ref|ZP_17447876.1| hypothetical protein IEM_02438 [Bacillus cereus BAG6O-2]
gi|423484980|ref|ZP_17461669.1| hypothetical protein IEQ_04757 [Bacillus cereus BAG6X1-2]
gi|423490108|ref|ZP_17466790.1| hypothetical protein IEU_04731 [Bacillus cereus BtB2-4]
gi|423495832|ref|ZP_17472476.1| hypothetical protein IEW_04730 [Bacillus cereus CER057]
gi|423497374|ref|ZP_17473991.1| hypothetical protein IEY_00601 [Bacillus cereus CER074]
gi|423507546|ref|ZP_17484114.1| hypothetical protein IG1_05088 [Bacillus cereus HD73]
gi|423513581|ref|ZP_17490111.1| hypothetical protein IG3_05077 [Bacillus cereus HuA2-1]
gi|423519630|ref|ZP_17496111.1| hypothetical protein IG7_04700 [Bacillus cereus HuA2-4]
gi|423521178|ref|ZP_17497651.1| hypothetical protein IGC_00561 [Bacillus cereus HuA4-10]
gi|423527214|ref|ZP_17503659.1| hypothetical protein IGE_00766 [Bacillus cereus HuB1-1]
gi|423532747|ref|ZP_17509165.1| hypothetical protein IGI_00579 [Bacillus cereus HuB2-9]
gi|423541990|ref|ZP_17518380.1| hypothetical protein IGK_04081 [Bacillus cereus HuB4-10]
gi|423548223|ref|ZP_17524581.1| hypothetical protein IGO_04658 [Bacillus cereus HuB5-5]
gi|423554578|ref|ZP_17530904.1| hypothetical protein IGW_05208 [Bacillus cereus ISP3191]
gi|423557488|ref|ZP_17533791.1| hypothetical protein II3_02693 [Bacillus cereus MC67]
gi|423566161|ref|ZP_17542436.1| hypothetical protein II5_05564 [Bacillus cereus MSX-A1]
gi|423571842|ref|ZP_17548080.1| hypothetical protein II7_05056 [Bacillus cereus MSX-A12]
gi|423573373|ref|ZP_17549492.1| hypothetical protein II9_00594 [Bacillus cereus MSX-D12]
gi|423583146|ref|ZP_17559257.1| hypothetical protein IIA_04661 [Bacillus cereus VD014]
gi|423588806|ref|ZP_17564892.1| hypothetical protein IIE_04217 [Bacillus cereus VD045]
gi|423595844|ref|ZP_17571874.1| hypothetical protein IIG_04711 [Bacillus cereus VD048]
gi|423597765|ref|ZP_17573765.1| hypothetical protein III_00567 [Bacillus cereus VD078]
gi|423608701|ref|ZP_17584593.1| hypothetical protein IIK_05281 [Bacillus cereus VD102]
gi|423619332|ref|ZP_17595165.1| hypothetical protein IIO_04657 [Bacillus cereus VD115]
gi|423621984|ref|ZP_17597762.1| hypothetical protein IK3_00582 [Bacillus cereus VD148]
gi|423631658|ref|ZP_17607405.1| hypothetical protein IK5_04508 [Bacillus cereus VD154]
gi|423634174|ref|ZP_17609827.1| hypothetical protein IK7_00583 [Bacillus cereus VD156]
gi|423644144|ref|ZP_17619761.1| hypothetical protein IK9_04088 [Bacillus cereus VD166]
gi|423650829|ref|ZP_17626399.1| hypothetical protein IKA_04616 [Bacillus cereus VD169]
gi|423657887|ref|ZP_17633186.1| hypothetical protein IKG_04875 [Bacillus cereus VD200]
gi|423660215|ref|ZP_17635384.1| hypothetical protein IKM_00612 [Bacillus cereus VDM022]
gi|423670511|ref|ZP_17645540.1| hypothetical protein IKO_04208 [Bacillus cereus VDM034]
gi|434378101|ref|YP_006612745.1| NifU-like domain-containing protein [Bacillus thuringiensis HD-789]
gi|449091975|ref|YP_007424416.1| nifU domain protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|452201467|ref|YP_007481548.1| NifU-like domain protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|29898552|gb|AAP11824.1| NifU protein [Bacillus cereus ATCC 14579]
gi|30259669|gb|AAP28855.1| nifU domain protein [Bacillus anthracis str. Ames]
gi|42740063|gb|AAS43987.1| nifU domain protein [Bacillus cereus ATCC 10987]
gi|47505640|gb|AAT34316.1| nifU domain protein [Bacillus anthracis str. 'Ames Ancestor']
gi|47556301|gb|EAL14635.1| NifU protein-related protein [Bacillus cereus G9241]
gi|49181738|gb|AAT57114.1| nifU domain protein [Bacillus anthracis str. Sterne]
gi|49332578|gb|AAT63224.1| nitrogen-fixing NifU domain protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51974049|gb|AAU15599.1| nitrogen-fixing NifU domain protein [Bacillus cereus E33L]
gi|74493584|gb|EAO56689.1| NifU protein [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|118419261|gb|ABK87680.1| NifU-like domain protein [Bacillus thuringiensis str. Al Hakam]
gi|163864862|gb|ABY45921.1| nitrogen-fixing NifU domain protein [Bacillus weihenstephanensis
KBAB4]
gi|164713462|gb|EDR18987.1| nifU domain protein [Bacillus anthracis str. A0488]
gi|167511988|gb|EDR87366.1| nifU domain protein [Bacillus anthracis str. A0193]
gi|167529611|gb|EDR92360.1| nifU domain protein [Bacillus anthracis str. A0442]
gi|170128096|gb|EDS96966.1| nifU domain protein [Bacillus anthracis str. A0389]
gi|170670120|gb|EDT20860.1| nifU domain protein [Bacillus anthracis str. A0465]
gi|172082335|gb|EDT67401.1| nifU domain protein [Bacillus anthracis str. A0174]
gi|190561654|gb|EDV15624.1| nifU domain protein [Bacillus anthracis str. Tsiankovskii-I]
gi|195994577|gb|EDX58532.1| nifU domain protein [Bacillus cereus W]
gi|196025275|gb|EDX63945.1| nifU domain protein [Bacillus cereus 03BB108]
gi|196028724|gb|EDX67331.1| nifU domain protein [Bacillus cereus NVH0597-99]
gi|206734968|gb|EDZ52137.1| nifU domain protein [Bacillus cereus AH1134]
gi|206745400|gb|EDZ56800.1| nifU domain protein [Bacillus cereus H3081.97]
gi|217063374|gb|ACJ77624.1| nifU domain protein [Bacillus cereus AH187]
gi|218163047|gb|ACK63039.1| nifU domain protein [Bacillus cereus B4264]
gi|218538404|gb|ACK90802.1| nifU domain protein [Bacillus cereus AH820]
gi|218541315|gb|ACK93709.1| nifU domain protein [Bacillus cereus G9842]
gi|221242461|gb|ACM15171.1| nitrogen-fixing NifU domain protein [Bacillus cereus Q1]
gi|225790034|gb|ACO30251.1| nifU domain protein [Bacillus cereus 03BB102]
gi|227002453|gb|ACP12196.1| nifU domain protein [Bacillus anthracis str. CDC 684]
gi|228584370|gb|EEK42505.1| hypothetical protein bcere0001_46120 [Bacillus cereus m1293]
gi|228590208|gb|EEK48076.1| hypothetical protein bcere0002_48780 [Bacillus cereus ATCC 10876]
gi|228596197|gb|EEK53872.1| hypothetical protein bcere0004_47230 [Bacillus cereus BGSC 6E1]
gi|228602143|gb|EEK59634.1| hypothetical protein bcere0005_45920 [Bacillus cereus 172560W]
gi|228607792|gb|EEK65106.1| hypothetical protein bcere0006_47280 [Bacillus cereus MM3]
gi|228613713|gb|EEK70838.1| hypothetical protein bcere0007_46180 [Bacillus cereus AH621]
gi|228619552|gb|EEK76438.1| hypothetical protein bcere0009_46940 [Bacillus cereus R309803]
gi|228624861|gb|EEK81629.1| hypothetical protein bcere0010_47200 [Bacillus cereus ATCC 4342]
gi|228630240|gb|EEK86890.1| hypothetical protein bcere0011_46710 [Bacillus cereus m1550]
gi|228635923|gb|EEK92406.1| hypothetical protein bcere0012_46260 [Bacillus cereus BDRD-ST24]
gi|228641738|gb|EEK98039.1| hypothetical protein bcere0013_47600 [Bacillus cereus BDRD-ST26]
gi|228653146|gb|EEL09025.1| hypothetical protein bcere0015_46490 [Bacillus cereus BDRD-Cer4]
gi|228658828|gb|EEL14483.1| hypothetical protein bcere0016_47720 [Bacillus cereus 95/8201]
gi|228664992|gb|EEL20480.1| hypothetical protein bcere0017_46890 [Bacillus cereus Rock1-3]
gi|228671043|gb|EEL26349.1| hypothetical protein bcere0018_46350 [Bacillus cereus Rock1-15]
gi|228677838|gb|EEL32081.1| hypothetical protein bcere0019_46970 [Bacillus cereus Rock3-28]
gi|228684033|gb|EEL37981.1| hypothetical protein bcere0020_46280 [Bacillus cereus Rock3-29]
gi|228689267|gb|EEL43086.1| hypothetical protein bcere0021_47700 [Bacillus cereus Rock3-42]
gi|228701116|gb|EEL53638.1| hypothetical protein bcere0023_48160 [Bacillus cereus Rock4-2]
gi|228706762|gb|EEL58970.1| hypothetical protein bcere0024_46310 [Bacillus cereus Rock4-18]
gi|228710417|gb|EEL62390.1| hypothetical protein bcere0025_46020 [Bacillus cereus F65185]
gi|228716589|gb|EEL68286.1| hypothetical protein bcere0026_46850 [Bacillus cereus AH603]
gi|228722556|gb|EEL73944.1| hypothetical protein bcere0027_46010 [Bacillus cereus AH676]
gi|228734878|gb|EEL85516.1| hypothetical protein bcere0029_46920 [Bacillus cereus AH1272]
gi|228741085|gb|EEL91310.1| hypothetical protein bcere0030_46810 [Bacillus cereus AH1273]
gi|228747091|gb|EEL96973.1| hypothetical protein bmyco0001_45420 [Bacillus mycoides DSM 2048]
gi|228771491|gb|EEM19960.1| hypothetical protein bthur0001_48520 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228777799|gb|EEM26071.1| hypothetical protein bthur0002_48460 [Bacillus thuringiensis Bt407]
gi|228784569|gb|EEM32589.1| hypothetical protein bthur0003_47960 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228791616|gb|EEM39212.1| hypothetical protein bthur0004_48450 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228798494|gb|EEM45486.1| hypothetical protein bthur0005_46480 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228804349|gb|EEM50960.1| hypothetical protein bthur0006_45740 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228810982|gb|EEM57325.1| hypothetical protein bthur0007_47990 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228817452|gb|EEM63537.1| hypothetical protein bthur0008_47490 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228823364|gb|EEM69197.1| hypothetical protein bthur0009_46860 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228829656|gb|EEM75282.1| hypothetical protein bthur0010_46580 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228835816|gb|EEM81179.1| hypothetical protein bthur0011_46620 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228842058|gb|EEM87161.1| hypothetical protein bthur0012_47840 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228848741|gb|EEM93586.1| hypothetical protein bthur0013_49320 [Bacillus thuringiensis IBL
200]
gi|228856185|gb|EEN00719.1| hypothetical protein bthur0014_46170 [Bacillus thuringiensis IBL
4222]
gi|229268485|gb|ACQ50122.1| nifU domain protein [Bacillus anthracis str. A0248]
gi|296326444|gb|ADH09372.1| NifU protein [Bacillus thuringiensis BMB171]
gi|300378606|gb|ADK07510.1| nitrogen-fixing NifU domain protein [Bacillus cereus biovar
anthracis str. CI]
gi|324328882|gb|ADY24142.1| nitrogen-fixing NifU domain-containing protein [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|326942769|gb|AEA18665.1| NifU protein [Bacillus thuringiensis serovar chinensis CT-43]
gi|358355469|dbj|BAL20641.1| nifU domain protein [Bacillus cereus NC7401]
gi|363617362|gb|EHL68761.1| hypothetical protein HMPREF1014_04663 [Bacillus sp. 7_6_55CFAA_CT2]
gi|364514654|gb|AEW58053.1| NifU-like domain protein [Bacillus cereus F837/76]
gi|384388676|gb|AFH86337.1| NifU-like domain protein [Bacillus anthracis str. H9401]
gi|401075281|gb|EJP83664.1| hypothetical protein IC1_05437 [Bacillus cereus VD022]
gi|401079063|gb|EJP87367.1| hypothetical protein IC3_04049 [Bacillus cereus VD142]
gi|401083753|gb|EJP92008.1| hypothetical protein IAU_03494 [Bacillus cereus IS075]
gi|401092163|gb|EJQ00297.1| hypothetical protein IC5_04530 [Bacillus cereus AND1407]
gi|401108285|gb|EJQ16217.1| hypothetical protein IE1_00573 [Bacillus cereus BAG3O-2]
gi|401108543|gb|EJQ16474.1| hypothetical protein IE3_00597 [Bacillus cereus BAG3X2-1]
gi|401109688|gb|EJQ17610.1| hypothetical protein IE5_04762 [Bacillus cereus BAG3X2-2]
gi|401113197|gb|EJQ21067.1| hypothetical protein IE7_04762 [Bacillus cereus BAG4O-1]
gi|401117821|gb|EJQ25656.1| hypothetical protein IE9_04549 [Bacillus cereus BAG4X12-1]
gi|401127801|gb|EJQ35508.1| hypothetical protein IEC_04128 [Bacillus cereus BAG5O-1]
gi|401136380|gb|EJQ43970.1| hypothetical protein IEQ_04757 [Bacillus cereus BAG6X1-2]
gi|401143964|gb|EJQ51497.1| hypothetical protein IEE_00504 [Bacillus cereus BAG5X1-1]
gi|401149668|gb|EJQ57135.1| hypothetical protein IEW_04730 [Bacillus cereus CER057]
gi|401157771|gb|EJQ65167.1| hypothetical protein IG7_04700 [Bacillus cereus HuA2-4]
gi|401163094|gb|EJQ70447.1| hypothetical protein IEY_00601 [Bacillus cereus CER074]
gi|401169327|gb|EJQ76573.1| hypothetical protein IGK_04081 [Bacillus cereus HuB4-10]
gi|401176252|gb|EJQ83448.1| hypothetical protein IGO_04658 [Bacillus cereus HuB5-5]
gi|401179549|gb|EJQ86720.1| hypothetical protein IGC_00561 [Bacillus cereus HuA4-10]
gi|401180874|gb|EJQ88030.1| hypothetical protein IGW_05208 [Bacillus cereus ISP3191]
gi|401192475|gb|EJQ99490.1| hypothetical protein II5_05564 [Bacillus cereus MSX-A1]
gi|401192894|gb|EJQ99902.1| hypothetical protein II3_02693 [Bacillus cereus MC67]
gi|401199437|gb|EJR06339.1| hypothetical protein II7_05056 [Bacillus cereus MSX-A12]
gi|401209206|gb|EJR15965.1| hypothetical protein IIA_04661 [Bacillus cereus VD014]
gi|401214920|gb|EJR21641.1| hypothetical protein II9_00594 [Bacillus cereus MSX-D12]
gi|401221738|gb|EJR28352.1| hypothetical protein IIG_04711 [Bacillus cereus VD048]
gi|401225194|gb|EJR31743.1| hypothetical protein IIE_04217 [Bacillus cereus VD045]
gi|401237336|gb|EJR43791.1| hypothetical protein IIK_05281 [Bacillus cereus VD102]
gi|401239297|gb|EJR45729.1| hypothetical protein III_00567 [Bacillus cereus VD078]
gi|401251657|gb|EJR57931.1| hypothetical protein IIO_04657 [Bacillus cereus VD115]
gi|401262652|gb|EJR68793.1| hypothetical protein IK3_00582 [Bacillus cereus VD148]
gi|401263501|gb|EJR69625.1| hypothetical protein IK5_04508 [Bacillus cereus VD154]
gi|401271209|gb|EJR77226.1| hypothetical protein IK9_04088 [Bacillus cereus VD166]
gi|401280762|gb|EJR86679.1| hypothetical protein IKA_04616 [Bacillus cereus VD169]
gi|401281535|gb|EJR87443.1| hypothetical protein IK7_00583 [Bacillus cereus VD156]
gi|401288621|gb|EJR94367.1| hypothetical protein IKG_04875 [Bacillus cereus VD200]
gi|401296197|gb|EJS01817.1| hypothetical protein IKO_04208 [Bacillus cereus VDM034]
gi|401303876|gb|EJS09437.1| hypothetical protein IKM_00612 [Bacillus cereus VDM022]
gi|401632424|gb|EJS50211.1| hypothetical protein ICE_04202 [Bacillus cereus BAG1X1-2]
gi|401639821|gb|EJS57558.1| hypothetical protein IC9_00572 [Bacillus cereus BAG1O-2]
gi|401642823|gb|EJS60529.1| hypothetical protein ICG_00596 [Bacillus cereus BAG1X1-3]
gi|401656288|gb|EJS73809.1| hypothetical protein ICU_00511 [Bacillus cereus BAG2X1-1]
gi|401660888|gb|EJS78361.1| hypothetical protein ICY_00361 [Bacillus cereus BAG2X1-3]
gi|401792193|gb|AFQ18232.1| NifU-like domain-containing protein [Bacillus thuringiensis HD-771]
gi|401796149|gb|AFQ10008.1| NifU-like domain-containing protein [Bacillus cereus FRI-35]
gi|401822003|gb|EJT21156.1| NifU-like domain-containing protein [Bacillus anthracis str. UR-1]
gi|401876658|gb|AFQ28825.1| NifU-like domain-containing protein [Bacillus thuringiensis HD-789]
gi|402420102|gb|EJV52374.1| hypothetical protein IEA_00661 [Bacillus cereus BAG4X2-1]
gi|402422265|gb|EJV54507.1| hypothetical protein IEK_00581 [Bacillus cereus BAG6O-1]
gi|402429787|gb|EJV61869.1| hypothetical protein IEU_04731 [Bacillus cereus BtB2-4]
gi|402432612|gb|EJV64668.1| hypothetical protein IEM_02438 [Bacillus cereus BAG6O-2]
gi|402443827|gb|EJV75721.1| hypothetical protein IG1_05088 [Bacillus cereus HD73]
gi|402445246|gb|EJV77119.1| hypothetical protein IG3_05077 [Bacillus cereus HuA2-1]
gi|402454377|gb|EJV86170.1| hypothetical protein IGE_00766 [Bacillus cereus HuB1-1]
gi|402464724|gb|EJV96413.1| hypothetical protein IGI_00579 [Bacillus cereus HuB2-9]
gi|403392848|gb|EJY90096.1| NifU-like domain-containing protein [Bacillus anthracis str. BF1]
gi|409176521|gb|AFV20826.1| putative nitrogen fixation protein YutI [Bacillus thuringiensis
Bt407]
gi|449025732|gb|AGE80895.1| nifU domain protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|452106860|gb|AGG03800.1| NifU-like domain protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 78
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 58/77 (75%)
Query: 78 IELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
+E P E + VLD++RP+L+ DGG+V L +I+ +V+L+L GACGSCPSS +T+K GI
Sbjct: 1 MENPHMQEQVLEVLDKLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGI 60
Query: 138 ERRLMEKIPEIVAVESV 154
ER L+E++P ++ VE V
Sbjct: 61 ERALLEEVPGVIEVEQV 77
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLR 220
+E + +VL+++RP+L+ GG +ELV I+E IVK+R+ G + +T++ + + L
Sbjct: 7 QEQVLEVLDKLRPFLL-RDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGIERALL 65
Query: 221 EKIPAIAAVQ 230
E++P + V+
Sbjct: 66 EEVPGVIEVE 75
>gi|312109659|ref|YP_003987975.1| nitrogen-fixing NifU domain-containing protein [Geobacillus sp.
Y4.1MC1]
gi|336234077|ref|YP_004586693.1| nitrogen-fixing NifU domain-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|423718775|ref|ZP_17692957.1| nifU-like domain protein [Geobacillus thermoglucosidans TNO-09.020]
gi|311214760|gb|ADP73364.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y4.1MC1]
gi|335360932|gb|AEH46612.1| nitrogen-fixing NifU domain-containing protein [Geobacillus
thermoglucosidasius C56-YS93]
gi|383368377|gb|EID45650.1| nifU-like domain protein [Geobacillus thermoglucosidans TNO-09.020]
Length = 78
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 55/70 (78%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E ++ VLD++RP+L+ DGG+ L +++ VV+L+L GACGSCPSS +T+K GIER L+E+
Sbjct: 8 EQVQEVLDKLRPFLLRDGGDCELIDVEDGVVKLRLLGACGSCPSSTITLKAGIERALLEE 67
Query: 145 IPEIVAVESV 154
+P IV VE V
Sbjct: 68 VPGIVEVEQV 77
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLR 220
+E +++VL+++RP+L+ GG EL+ +++ +VK+R+ G + +T++ + + L
Sbjct: 7 KEQVQEVLDKLRPFLL-RDGGDCELIDVEDGVVKLRLLGACGSCPSSTITLKAGIERALL 65
Query: 221 EKIPAIAAVQ 230
E++P I V+
Sbjct: 66 EEVPGIVEVE 75
>gi|229032593|ref|ZP_04188558.1| hypothetical protein bcere0028_46300 [Bacillus cereus AH1271]
gi|229135778|ref|ZP_04264548.1| hypothetical protein bcere0014_46610 [Bacillus cereus BDRD-ST196]
gi|423400200|ref|ZP_17377373.1| hypothetical protein ICW_00598 [Bacillus cereus BAG2X1-2]
gi|423462241|ref|ZP_17439037.1| hypothetical protein IEI_05380 [Bacillus cereus BAG5X2-1]
gi|423479106|ref|ZP_17455821.1| hypothetical protein IEO_04564 [Bacillus cereus BAG6X1-1]
gi|423673287|ref|ZP_17648226.1| hypothetical protein IKS_00830 [Bacillus cereus VDM062]
gi|228647644|gb|EEL03709.1| hypothetical protein bcere0014_46610 [Bacillus cereus BDRD-ST196]
gi|228728778|gb|EEL79789.1| hypothetical protein bcere0028_46300 [Bacillus cereus AH1271]
gi|401133512|gb|EJQ41141.1| hypothetical protein IEI_05380 [Bacillus cereus BAG5X2-1]
gi|401310915|gb|EJS16224.1| hypothetical protein IKS_00830 [Bacillus cereus VDM062]
gi|401655949|gb|EJS73474.1| hypothetical protein ICW_00598 [Bacillus cereus BAG2X1-2]
gi|402425978|gb|EJV58118.1| hypothetical protein IEO_04564 [Bacillus cereus BAG6X1-1]
Length = 78
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 58/77 (75%)
Query: 78 IELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
+E P E + VLD++RP+L+ DGG+V L +I+ +V+L+L GACGSCPSS +T+K GI
Sbjct: 1 MENPHMEEQVLEVLDKLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGI 60
Query: 138 ERRLMEKIPEIVAVESV 154
ER L+E++P ++ VE V
Sbjct: 61 ERALLEEVPGVIEVEQV 77
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLR 220
EE + +VL+++RP+L+ GG +ELV I+E IVK+R+ G + +T++ + + L
Sbjct: 7 EEQVLEVLDKLRPFLL-RDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGIERALL 65
Query: 221 EKIPAIAAVQ 230
E++P + V+
Sbjct: 66 EEVPGVIEVE 75
>gi|228993673|ref|ZP_04153580.1| hypothetical protein bpmyx0001_43990 [Bacillus pseudomycoides DSM
12442]
gi|228999709|ref|ZP_04159285.1| hypothetical protein bmyco0003_42630 [Bacillus mycoides Rock3-17]
gi|229007266|ref|ZP_04164867.1| hypothetical protein bmyco0002_41480 [Bacillus mycoides Rock1-4]
gi|229087461|ref|ZP_04219595.1| hypothetical protein bcere0022_40270 [Bacillus cereus Rock3-44]
gi|423613112|ref|ZP_17588972.1| hypothetical protein IIM_03826 [Bacillus cereus VD107]
gi|228695883|gb|EEL48734.1| hypothetical protein bcere0022_40270 [Bacillus cereus Rock3-44]
gi|228754020|gb|EEM03457.1| hypothetical protein bmyco0002_41480 [Bacillus mycoides Rock1-4]
gi|228760071|gb|EEM09041.1| hypothetical protein bmyco0003_42630 [Bacillus mycoides Rock3-17]
gi|228766102|gb|EEM14749.1| hypothetical protein bpmyx0001_43990 [Bacillus pseudomycoides DSM
12442]
gi|401242674|gb|EJR49047.1| hypothetical protein IIM_03826 [Bacillus cereus VD107]
Length = 78
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 58/77 (75%)
Query: 78 IELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
+E P E + VLD++RP+L+ DGG+V L +I+ +V+L+L GACGSCPSS +T+K GI
Sbjct: 1 MENPNMQEQVLEVLDKLRPFLLRDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGI 60
Query: 138 ERRLMEKIPEIVAVESV 154
ER L+E++P ++ VE V
Sbjct: 61 ERALLEEVPGVIEVEQV 77
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLR 220
+E + +VL+++RP+L+ GG +ELV I+E IVK+R+ G + +T++ + + L
Sbjct: 7 QEQVLEVLDKLRPFLL-RDGGDVELVDIEEGIVKLRLMGACGSCPSSTITLKAGIERALL 65
Query: 221 EKIPAIAAVQ 230
E++P + V+
Sbjct: 66 EEVPGVIEVE 75
>gi|398308156|ref|ZP_10511630.1| (Fe-S)-binding protein [Bacillus mojavensis RO-H-1]
Length = 78
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 55/70 (78%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E ++ VLD++RP+L+ DGG+ L ++D +V+L+L GACGSCPSS +T+K GIER L+E+
Sbjct: 8 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALLEE 67
Query: 145 IPEIVAVESV 154
+P ++ VE V
Sbjct: 68 VPGVIEVEQV 77
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
E +++VL+++RP+L+ GG ELV +DE IVK+R+ G + +T++ + + L E
Sbjct: 8 EQVQEVLDKLRPFLL-RDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALLE 66
Query: 222 KIPAIAAVQ 230
++P + V+
Sbjct: 67 EVPGVIEVE 75
>gi|229916513|ref|YP_002885159.1| nitrogen-fixing NifU domain-containing protein [Exiguobacterium sp.
AT1b]
gi|229467942|gb|ACQ69714.1| nitrogen-fixing NifU domain protein [Exiguobacterium sp. AT1b]
Length = 75
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 56/70 (80%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ ++ VLD++RP+L+ DGG+V L +++ +V+L+L GACGSCPSS +T+K GIER L+E+
Sbjct: 5 DQVQEVLDKLRPFLLRDGGDVELVDVEEGIVKLRLMGACGSCPSSTITLKAGIERALIEE 64
Query: 145 IPEIVAVESV 154
+P IV VE V
Sbjct: 65 VPGIVEVEQV 74
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ +++VL+++RP+L+ GG +ELV ++E IVK+R+ G + +T++ + + L E
Sbjct: 5 DQVQEVLDKLRPFLL-RDGGDVELVDVEEGIVKLRLMGACGSCPSSTITLKAGIERALIE 63
Query: 222 KIPAIAAVQ 230
++P I V+
Sbjct: 64 EVPGIVEVE 72
>gi|387793238|ref|YP_006258303.1| thioredoxin-like protein [Solitalea canadensis DSM 3403]
gi|379656071|gb|AFD09127.1| thioredoxin-like protein [Solitalea canadensis DSM 3403]
Length = 97
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
+E L++IRPYL +DGGNV + E+ D N+++LKL G+CGSCP S+MT+K GIE+ +M ++
Sbjct: 10 VEGALNQIRPYLEADGGNVEVLEVTDDNILKLKLLGSCGSCPMSIMTLKAGIEQAVMREV 69
Query: 146 PEIVAVES 153
PEIV+VE+
Sbjct: 70 PEIVSVEA 77
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
Query: 168 IEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKLREK 222
+E L +IRPYL A GG++E++ + D+ I+K+++ G +MT++ + Q + +
Sbjct: 10 VEGALNQIRPYL-EADGGNVEVLEVTDDNILKLKLLGSCGSCPMSIMTLKAGIEQAVMRE 68
Query: 223 IPAIAAVQ 230
+P I +V+
Sbjct: 69 VPEIVSVE 76
>gi|302848639|ref|XP_002955851.1| hypothetical protein VOLCADRAFT_96828 [Volvox carteri f.
nagariensis]
gi|300258819|gb|EFJ43052.1| hypothetical protein VOLCADRAFT_96828 [Volvox carteri f.
nagariensis]
Length = 540
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 84/147 (57%), Gaps = 4/147 (2%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
S+ + LT E +++ L+E+RPYL++DGG+V + E+ +V L+LQGAC SCPS TMK
Sbjct: 389 SSGSVALTVEAVQAALEEVRPYLMADGGDVEVVEVKDGIVYLRLQGACSSCPSQSATMKG 448
Query: 136 GIERRLMEKI-PEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDE 194
GIER + + +++ + + E+ G E ++ L +R + GGS E+V ++
Sbjct: 449 GIERVIRQTFGDQVIDILQLESEDPG--ATAERVDAALNMLRG-AISNLGGSAEVVGVEG 505
Query: 195 PIVKVRITGPAAGVMTVRVAVTQKLRE 221
+ +R GP A V+ A+ ++
Sbjct: 506 GVCTIRYRGPPAIGKGVQGAIKDTFKD 532
>gi|126652035|ref|ZP_01724224.1| nitrogen fixation protein (NifU protein) [Bacillus sp. B14905]
gi|169826170|ref|YP_001696328.1| NifU-like protein [Lysinibacillus sphaericus C3-41]
gi|299536342|ref|ZP_07049655.1| NifU-like protein [Lysinibacillus fusiformis ZC1]
gi|424738370|ref|ZP_18166808.1| nitrogen fixation protein (NifU protein) [Lysinibacillus fusiformis
ZB2]
gi|126591125|gb|EAZ85235.1| nitrogen fixation protein (NifU protein) [Bacillus sp. B14905]
gi|168990658|gb|ACA38198.1| NifU-like protein [Lysinibacillus sphaericus C3-41]
gi|298728328|gb|EFI68890.1| NifU-like protein [Lysinibacillus fusiformis ZC1]
gi|422947575|gb|EKU41967.1| nitrogen fixation protein (NifU protein) [Lysinibacillus fusiformis
ZB2]
Length = 78
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 55/70 (78%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ ++ VLD++RP+L+ DGG+ L +++ VV+L+L GACGSCPSS +T+K GIER L+E+
Sbjct: 8 DQVQEVLDKLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGIERALLEE 67
Query: 145 IPEIVAVESV 154
+P IV VE V
Sbjct: 68 VPGIVEVEQV 77
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ +++VL+++RP+L+ GG ELV +++ +VK+R+ G + +T++ + + L E
Sbjct: 8 DQVQEVLDKLRPFLL-RDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGIERALLE 66
Query: 222 KIPAIAAVQ 230
++P I V+
Sbjct: 67 EVPGIVEVE 75
>gi|373954769|ref|ZP_09614729.1| nitrogen-fixing NifU domain-containing protein [Mucilaginibacter
paludis DSM 18603]
gi|373891369|gb|EHQ27266.1| nitrogen-fixing NifU domain-containing protein [Mucilaginibacter
paludis DSM 18603]
Length = 92
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ +E+ LD IRPYL +DGGNV++ EI NVV+LKL G+CGSCP S+MT+K GIE+ + +
Sbjct: 5 DQVEAALDTIRPYLETDGGNVSVEEITADNVVKLKLLGSCGSCPMSIMTLKAGIEQAIKK 64
Query: 144 KIPEIVAVESV 154
+PE+ VE++
Sbjct: 65 AVPEVTGVEAI 75
>gi|56964703|ref|YP_176434.1| nitrogen fixation protein [Bacillus clausii KSM-K16]
gi|56910946|dbj|BAD65473.1| nitrogen fixation protein [Bacillus clausii KSM-K16]
Length = 79
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 55/70 (78%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E ++ VLD++RP+L+ DGG+V L +++ VV+++L GACGSCPSS +T+K GIER L+E+
Sbjct: 9 EQVQEVLDKLRPFLLRDGGDVELIDVEDGVVKVRLLGACGSCPSSTITLKAGIERALLEE 68
Query: 145 IPEIVAVESV 154
+P I +E V
Sbjct: 69 VPGITEIEQV 78
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 50/77 (64%), Gaps = 6/77 (7%)
Query: 158 ETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRV 213
ET EL E+ +++VL+++RP+L+ GG +EL+ +++ +VKVR+ G + +T++
Sbjct: 2 ETSTELMEQ-VQEVLDKLRPFLL-RDGGDVELIDVEDGVVKVRLLGACGSCPSSTITLKA 59
Query: 214 AVTQKLREKIPAIAAVQ 230
+ + L E++P I ++
Sbjct: 60 GIERALLEEVPGITEIE 76
>gi|221482460|gb|EEE20808.1| hypothetical protein TGGT1_065730 [Toxoplasma gondii GT1]
Length = 483
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 91/160 (56%), Gaps = 9/160 (5%)
Query: 71 VATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDG--NVVRLKLQGACGSCPS 128
+++P ++ E+ L + +E VL+ +RPYL GGNV L E+D +VRL +GAC +CPS
Sbjct: 247 MSSPSASSEVGLNSTMVEQVLESVRPYLRGHGGNVKLVELDSEKKIVRLAFKGACSTCPS 306
Query: 129 SVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEI---RPYLVGAAGG 185
+ T+ G++ L E P++ E+ D EL IE VLE + RP + G
Sbjct: 307 AHQTLYEGLQGALREVWPDLSVEEAKDDGVWEEELQPLTIESVLEALKGTRPA-IERLGA 365
Query: 186 SLELVTID-EPIVKVRITGPAAGVMTVRVAVTQKLREKIP 224
+LE++++ + +R GP A T+R+ V +LR+K+P
Sbjct: 366 TLEVLSVSPNGDIVLRYRGPNA--QTIRIGVEMELRDKLP 403
>gi|149183085|ref|ZP_01861537.1| YutI [Bacillus sp. SG-1]
gi|148849214|gb|EDL63412.1| YutI [Bacillus sp. SG-1]
Length = 78
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
++ VLD++RP+L+ DGG+ L +I+ +V+L+L GACGSCPSS +T+K GIER L+E++
Sbjct: 9 QVQEVLDKLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGIERALLEEV 68
Query: 146 PEIVAVESV 154
P IV VE V
Sbjct: 69 PGIVEVEQV 77
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 167 NIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLREK 222
+++VL+++RP+L+ GG ELV I++ IVK+R+ G + +T++ + + L E+
Sbjct: 9 QVQEVLDKLRPFLL-RDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGIERALLEE 67
Query: 223 IPAIAAVQ 230
+P I V+
Sbjct: 68 VPGIVEVE 75
>gi|452973206|gb|EME73028.1| iron-sulfur scaffold protein YutI [Bacillus sonorensis L12]
Length = 79
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 55/70 (78%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E ++ VLD++RP+L+ DGG+ L +++ +V+L+L GACGSCPSS +T+K GIER L+E+
Sbjct: 9 EQVQEVLDKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERALLEE 68
Query: 145 IPEIVAVESV 154
+P ++ VE V
Sbjct: 69 VPGVIEVEQV 78
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
E +++VL+++RP+L+ GG ELV +++ IVK+R+ G + +T++ + + L E
Sbjct: 9 EQVQEVLDKLRPFLL-RDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERALLE 67
Query: 222 KIPAIAAVQ 230
++P + V+
Sbjct: 68 EVPGVIEVE 76
>gi|52081716|ref|YP_080507.1| hypothetical protein BL02118 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319647633|ref|ZP_08001851.1| nitrogen fixation protein [Bacillus sp. BT1B_CT2]
gi|404490599|ref|YP_006714705.1| iron-sulfur scaffold protein YutI [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423683712|ref|ZP_17658551.1| hypothetical protein MUY_03565 [Bacillus licheniformis WX-02]
gi|52004927|gb|AAU24869.1| Conserved protein YutI [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52349604|gb|AAU42238.1| putative iron-sulfur scaffold protein YutI [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|317389974|gb|EFV70783.1| nitrogen fixation protein [Bacillus sp. BT1B_CT2]
gi|383440486|gb|EID48261.1| hypothetical protein MUY_03565 [Bacillus licheniformis WX-02]
Length = 79
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 55/70 (78%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E ++ VLD++RP+L+ DGG+ L +++ +V+L+L GACGSCPSS +T+K GIER L+E+
Sbjct: 9 EQVQEVLDKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERALLEE 68
Query: 145 IPEIVAVESV 154
+P ++ VE V
Sbjct: 69 VPGVIEVEQV 78
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
E +++VL+++RP+L+ GG ELV +++ IVK+R+ G + +T++ + + L E
Sbjct: 9 EQVQEVLDKLRPFLL-RDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERALLE 67
Query: 222 KIPAIAAVQ 230
++P + V+
Sbjct: 68 EVPGVIEVE 76
>gi|335039700|ref|ZP_08532851.1| nitrogen-fixing NifU domain-containing protein [Caldalkalibacillus
thermarum TA2.A1]
gi|334180403|gb|EGL83017.1| nitrogen-fixing NifU domain-containing protein [Caldalkalibacillus
thermarum TA2.A1]
Length = 75
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
++ VLD++RP+L DGG+ L ++ VV+L+L GACGSCP+S MT+K GIER LME+I
Sbjct: 6 RVQEVLDKLRPFLQRDGGDCELVAVEDGVVKLRLLGACGSCPASTMTLKAGIERALMEEI 65
Query: 146 PEIVAVESV 154
PEI VE V
Sbjct: 66 PEIKEVEQV 74
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLR 220
E +++VL+++RP+L GG ELV +++ +VK+R+ G A MT++ + + L
Sbjct: 4 EARVQEVLDKLRPFL-QRDGGDCELVAVEDGVVKLRLLGACGSCPASTMTLKAGIERALM 62
Query: 221 EKIPAIAAVQ 230
E+IP I V+
Sbjct: 63 EEIPEIKEVE 72
>gi|393199792|ref|YP_006461634.1| thioredoxin-like protein [Solibacillus silvestris StLB046]
gi|406668318|ref|ZP_11076052.1| Fe-S cluster assembly protein NifU [Bacillus isronensis B3W22]
gi|327439123|dbj|BAK15488.1| thioredoxin-like protein [Solibacillus silvestris StLB046]
gi|405383845|gb|EKB43310.1| Fe-S cluster assembly protein NifU [Bacillus isronensis B3W22]
Length = 78
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
++ VLD++RP+L+ DGG+ L +I+ +V+L+L GACGSCPSS +T+K GIER L+E++
Sbjct: 9 QVQEVLDKLRPFLLRDGGDCELVDIEEGIVKLRLLGACGSCPSSTITLKAGIERALLEEV 68
Query: 146 PEIVAVESV 154
P IV VE V
Sbjct: 69 PGIVEVEQV 77
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 167 NIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLREK 222
+++VL+++RP+L+ GG ELV I+E IVK+R+ G + +T++ + + L E+
Sbjct: 9 QVQEVLDKLRPFLL-RDGGDCELVDIEEGIVKLRLLGACGSCPSSTITLKAGIERALLEE 67
Query: 223 IPAIAAVQ 230
+P I V+
Sbjct: 68 VPGIVEVE 75
>gi|288553995|ref|YP_003425930.1| hypothetical protein BpOF4_04870 [Bacillus pseudofirmus OF4]
gi|288545155|gb|ADC49038.1| hypothetical protein with NifU domain [Bacillus pseudofirmus OF4]
Length = 79
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 55/70 (78%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E ++ VLD++RP+L+ DGG+V L E++ +V+++L GACGSCPSS +T+K GIER L+E+
Sbjct: 9 EQVQEVLDKLRPFLLRDGGDVELVEVEDGIVKVRLLGACGSCPSSTITLKAGIERALLEE 68
Query: 145 IPEIVAVESV 154
+P + +E V
Sbjct: 69 VPGVKEIEQV 78
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
E +++VL+++RP+L+ GG +ELV +++ IVKVR+ G + +T++ + + L E
Sbjct: 9 EQVQEVLDKLRPFLL-RDGGDVELVEVEDGIVKVRLLGACGSCPSSTITLKAGIERALLE 67
Query: 222 KIPAIAAVQ 230
++P + ++
Sbjct: 68 EVPGVKEIE 76
>gi|389815642|ref|ZP_10206905.1| NifU-like protein [Planococcus antarcticus DSM 14505]
gi|388465848|gb|EIM08162.1| NifU-like protein [Planococcus antarcticus DSM 14505]
Length = 78
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 55/73 (75%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
L + + VLD++RP+L+ DGG+ L +I+ +V+L+L GACGSCPSS +T+K GIER L
Sbjct: 5 LVEDQVMEVLDKLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGIERAL 64
Query: 142 MEKIPEIVAVESV 154
+E++P IV VE V
Sbjct: 65 VEEVPGIVEVEQV 77
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQK 218
L E+ + +VL+++RP+L+ GG ELV I++ IVK+R+ G + +T++ + +
Sbjct: 5 LVEDQVMEVLDKLRPFLL-RDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGIERA 63
Query: 219 LREKIPAIAAVQ 230
L E++P I V+
Sbjct: 64 LVEEVPGIVEVE 75
>gi|297583473|ref|YP_003699253.1| nitrogen-fixing NifU domain-containing protein [Bacillus
selenitireducens MLS10]
gi|297141930|gb|ADH98687.1| nitrogen-fixing NifU domain protein [Bacillus selenitireducens
MLS10]
Length = 78
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 82 LTAENIES----VLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
+T E +ES VLD++RP+L+ DGG+V L +++ VV+++L GACGSCPSS +T+K GI
Sbjct: 1 MTTETMESQVQEVLDKLRPFLLRDGGDVELVDVEDGVVKVRLMGACGSCPSSTITLKAGI 60
Query: 138 ERRLMEKIPEIVAVESV 154
ER L+E++P + +E V
Sbjct: 61 ERALLEEVPGVTELEQV 77
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 162 ELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQ 217
E E +++VL+++RP+L+ GG +ELV +++ +VKVR+ G + +T++ + +
Sbjct: 4 ETMESQVQEVLDKLRPFLL-RDGGDVELVDVEDGVVKVRLMGACGSCPSSTITLKAGIER 62
Query: 218 KLREKIPAIAAVQ 230
L E++P + ++
Sbjct: 63 ALLEEVPGVTELE 75
>gi|386813085|ref|ZP_10100310.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386405355|dbj|GAB63191.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 72
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 55/68 (80%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E +E L+ IRP L +DGG++ L +I+G VV+++L+GACG+CPS++MT+K G+E RL E+
Sbjct: 3 EKVEEALNHIRPALQADGGDIELVDIEGGVVKVRLRGACGTCPSALMTLKYGVEERLKEE 62
Query: 145 IPEIVAVE 152
IPE+ +VE
Sbjct: 63 IPEVESVE 70
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
E +E+ L IRP L A GG +ELV I+ +VKVR+ G + +MT++ V ++L+E
Sbjct: 3 EKVEEALNHIRPAL-QADGGDIELVDIEGGVVKVRLRGACGTCPSALMTLKYGVEERLKE 61
Query: 222 KIPAIAAVQL 231
+IP + +V+L
Sbjct: 62 EIPEVESVEL 71
>gi|323488633|ref|ZP_08093875.1| NifU-like protein [Planococcus donghaensis MPA1U2]
gi|323397651|gb|EGA90455.1| NifU-like protein [Planococcus donghaensis MPA1U2]
gi|456012978|gb|EMF46659.1| NifU-like domain protein [Planococcus halocryophilus Or1]
Length = 78
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 55/73 (75%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
L + + VLD++RP+L+ DGG+ L +I+ +V+L+L GACGSCPSS +T+K GIER L
Sbjct: 5 LLEDQVMEVLDKLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGIERAL 64
Query: 142 MEKIPEIVAVESV 154
+E++P IV VE V
Sbjct: 65 VEEVPGIVEVEQV 77
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQK 218
L E+ + +VL+++RP+L+ GG ELV I++ IVK+R+ G + +T++ + +
Sbjct: 5 LLEDQVMEVLDKLRPFLL-RDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGIERA 63
Query: 219 LREKIPAIAAVQ 230
L E++P I V+
Sbjct: 64 LVEEVPGIVEVE 75
>gi|347752687|ref|YP_004860252.1| nitrogen-fixing NifU domain-containing protein [Bacillus coagulans
36D1]
gi|347585205|gb|AEP01472.1| nitrogen-fixing NifU domain-containing protein [Bacillus coagulans
36D1]
Length = 78
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 54/71 (76%)
Query: 84 AENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ VLD++RP+L+ DGG+ L +++ +V+L+L GACGSCPSS +T+K GIER L E
Sbjct: 7 TEQVQEVLDKLRPFLLRDGGDCELIDVEDGIVKLRLLGACGSCPSSTITLKAGIERALFE 66
Query: 144 KIPEIVAVESV 154
++P ++ VE V
Sbjct: 67 EVPGVMEVEQV 77
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
E +++VL+++RP+L+ GG EL+ +++ IVK+R+ G + +T++ + + L E
Sbjct: 8 EQVQEVLDKLRPFLL-RDGGDCELIDVEDGIVKLRLLGACGSCPSSTITLKAGIERALFE 66
Query: 222 KIPAIAAVQ 230
++P + V+
Sbjct: 67 EVPGVMEVE 75
>gi|374709976|ref|ZP_09714410.1| hypothetical protein SinuC_07103 [Sporolactobacillus inulinus CASD]
Length = 73
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 54/70 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ +E VL+++RPYL+ DGG+V L E++ VVR++L GACG+CPSS +T+K GIER L+E
Sbjct: 3 QQVEEVLEKLRPYLLRDGGDVELLEVEDGVVRVRLLGACGNCPSSTLTLKAGIERALIEN 62
Query: 145 IPEIVAVESV 154
+P I +E V
Sbjct: 63 VPGIKELEQV 72
Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ +E+VLE++RPYL+ GG +EL+ +++ +V+VR+ G + +T++ + + L E
Sbjct: 3 QQVEEVLEKLRPYLL-RDGGDVELLEVEDGVVRVRLLGACGNCPSSTLTLKAGIERALIE 61
Query: 222 KIPAIAAVQ 230
+P I ++
Sbjct: 62 NVPGIKELE 70
>gi|255069975|ref|XP_002507069.1| iron-sulfur cluster scaffold protein, plastid precursor [Micromonas
sp. RCC299]
gi|226522344|gb|ACO68327.1| iron-sulfur cluster scaffold protein, plastid precursor [Micromonas
sp. RCC299]
Length = 393
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 85/148 (57%), Gaps = 15/148 (10%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
LT EN+++ L+E+RP+L +DGG+V + I+ +V +++ GACG+C SS T+K GIE L
Sbjct: 240 LTVENVDAALNEVRPFLAADGGDVEVVGIEDGIVAVRMFGACGTCSSSTATLKGGIEATL 299
Query: 142 M-----EKIPEIVAVESVADEETG-----LELNEENIEKVLEEIRPYLVGAAGGSLELVT 191
E I E+V ++ + G +E EE+++K+ I Y GGS+++V
Sbjct: 300 FKVFGREAIKEVVNLDQGGEGGKGPMSLSVEKMEEHLKKLEGAIHNY-----GGSVKVVE 354
Query: 192 IDEPIVKVRITGPAAGVMTVRVAVTQKL 219
++ +V + +GP A +V ++ K
Sbjct: 355 VESGVVTLAFSGPLALAQSVASSIKGKF 382
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 162 ELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITG 203
EL EN++ L E+RP+L A GG +E+V I++ IV VR+ G
Sbjct: 239 ELTVENVDAALNEVRPFLA-ADGGDVEVVGIEDGIVAVRMFG 279
>gi|433546960|ref|ZP_20503251.1| iron-sulfur cluster assembly protein [Brevibacillus agri BAB-2500]
gi|432181747|gb|ELK39357.1| iron-sulfur cluster assembly protein [Brevibacillus agri BAB-2500]
Length = 73
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 54/70 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ ++ VLD++RPYL DGG+V L +++ +V+L+L GACGSCPSS +T+K GIER L+E+
Sbjct: 3 DQVQEVLDKLRPYLQRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEE 62
Query: 145 IPEIVAVESV 154
IP I V+ V
Sbjct: 63 IPGIKEVQQV 72
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ +++VL+++RPYL GG ++LV +++ IVK+R+ G + +T++ + + L E
Sbjct: 3 DQVQEVLDKLRPYL-QRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVE 61
Query: 222 KIPAIAAVQ 230
+IP I VQ
Sbjct: 62 EIPGIKEVQ 70
>gi|145350853|ref|XP_001419810.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580042|gb|ABO98103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 73
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 83 TAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
T EN++ LDE+RPYL++DGGNV L +I+G ++ ++L GACG+C SS TMK GIE+ L
Sbjct: 1 TMENVDEALDEVRPYLVADGGNVELVKIEGKIIVVRLNGACGTCASSSATMKGGIEKLLK 60
Query: 143 EKIPEIVAVESVAD 156
+K + AVE V D
Sbjct: 61 QKFGD--AVEEVVD 72
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLRE 221
EN+++ L+E+RPYLV A GG++ELV I+ I+ VR+ G A+ T++ + + L++
Sbjct: 3 ENVDEALDEVRPYLV-ADGGNVELVKIEGKIIVVRLNGACGTCASSSATMKGGIEKLLKQ 61
Query: 222 KI 223
K
Sbjct: 62 KF 63
>gi|258405531|ref|YP_003198273.1| nitrogen-fixing NifU domain-containing protein [Desulfohalobium
retbaense DSM 5692]
gi|257797758|gb|ACV68695.1| nitrogen-fixing NifU domain protein [Desulfohalobium retbaense DSM
5692]
Length = 73
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E IE+ LD++RP L +DGG++ L EI D N+VR++LQGAC CP S MT+K G+ER L++
Sbjct: 3 EKIEAALDKVRPVLQADGGDIELVEITDNNIVRVRLQGACKGCPMSQMTLKNGVERVLLK 62
Query: 144 KIPEIVAVESV 154
++PEI VESV
Sbjct: 63 EVPEIKGVESV 73
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVTQKLR 220
E IE L+++RP L A GG +ELV I D IV+VR+ G G MT++ V + L
Sbjct: 3 EKIEAALDKVRPVL-QADGGDIELVEITDNNIVRVRLQGACKGCPMSQMTLKNGVERVLL 61
Query: 221 EKIPAIAAVQ 230
+++P I V+
Sbjct: 62 KEVPEIKGVE 71
>gi|399047236|ref|ZP_10739332.1| thioredoxin-like protein [Brevibacillus sp. CF112]
gi|398054843|gb|EJL46949.1| thioredoxin-like protein [Brevibacillus sp. CF112]
Length = 75
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 54/70 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ ++ VLD++RPYL DGG+V L +++ +V+L+L GACGSCPSS +T+K GIER L+E+
Sbjct: 5 DQVQEVLDKLRPYLQRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEE 64
Query: 145 IPEIVAVESV 154
IP I V+ V
Sbjct: 65 IPGIKEVQQV 74
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ +++VL+++RPYL GG ++LV +++ IVK+R+ G + +T++ + + L E
Sbjct: 5 DQVQEVLDKLRPYL-QRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVE 63
Query: 222 KIPAIAAVQ 230
+IP I VQ
Sbjct: 64 EIPGIKEVQ 72
>gi|237841427|ref|XP_002370011.1| hypothetical protein TGME49_021920 [Toxoplasma gondii ME49]
gi|211967675|gb|EEB02871.1| hypothetical protein TGME49_021920 [Toxoplasma gondii ME49]
Length = 517
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 90/160 (56%), Gaps = 9/160 (5%)
Query: 71 VATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDG--NVVRLKLQGACGSCPS 128
+++P ++ E+ L + +E VL+ +RPYL GGNV L E+D VRL +GAC +CPS
Sbjct: 281 MSSPSASSEVGLNSTMVEQVLESVRPYLRGHGGNVKLVELDSEKKTVRLAFKGACSTCPS 340
Query: 129 SVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEI---RPYLVGAAGG 185
+ T+ G++ L E P++ E+ D EL IE VLE + RP + G
Sbjct: 341 AHQTLYEGLQGALREVWPDLSVEEAKDDGVWEEELQPLTIESVLEALKGTRP-AIERLGA 399
Query: 186 SLELVTID-EPIVKVRITGPAAGVMTVRVAVTQKLREKIP 224
+LE++++ + +R GP A T+R+ V +LR+K+P
Sbjct: 400 TLEVLSVSPNGDIVLRYRGPNA--QTIRIGVEMELRDKLP 437
>gi|311031755|ref|ZP_07709845.1| NifU-like protein [Bacillus sp. m3-13]
Length = 78
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 55/74 (74%)
Query: 81 PLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERR 140
P ++ VLD++RP+L+ DGG+ L +++ +V+L+L GACGSCPSS +T+K GIER
Sbjct: 4 PEINAQVQEVLDKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERA 63
Query: 141 LMEKIPEIVAVESV 154
L+E++P I+ VE V
Sbjct: 64 LLEEVPGIIEVEQV 77
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 167 NIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLREK 222
+++VL+++RP+L+ GG ELV +++ IVK+R+ G + +T++ + + L E+
Sbjct: 9 QVQEVLDKLRPFLL-RDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERALLEE 67
Query: 223 IPAIAAVQ 230
+P I V+
Sbjct: 68 VPGIIEVE 75
>gi|398812977|ref|ZP_10571683.1| thioredoxin-like protein [Brevibacillus sp. BC25]
gi|398039967|gb|EJL33089.1| thioredoxin-like protein [Brevibacillus sp. BC25]
Length = 75
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 54/70 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ ++ VLD++RPYL DGG+V L +++ +V+L+L GACGSCPSS +T+K GIER L+E+
Sbjct: 5 DQVQEVLDKLRPYLQRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEE 64
Query: 145 IPEIVAVESV 154
IP I V+ V
Sbjct: 65 IPGIKEVQQV 74
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ +++VL+++RPYL GG ++LV +++ IVK+R+ G + +T++ + + L E
Sbjct: 5 DQVQEVLDKLRPYL-QRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVE 63
Query: 222 KIPAIAAVQ 230
+IP I VQ
Sbjct: 64 EIPGIKEVQ 72
>gi|333373977|ref|ZP_08465871.1| NifU domain protein [Desmospora sp. 8437]
gi|332968729|gb|EGK07781.1| NifU domain protein [Desmospora sp. 8437]
Length = 73
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 53/70 (75%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E ++ VLD++RP++ DGG+V L ++ VV+++L GACGSCPSS +T+K GIER LME+
Sbjct: 3 EQVQEVLDKLRPFIQRDGGDVELVNVEDGVVKVRLLGACGSCPSSTITLKAGIERALMEE 62
Query: 145 IPEIVAVESV 154
IP + VE V
Sbjct: 63 IPGVTEVEQV 72
Score = 43.1 bits (100), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLR 220
+E +++VL+++RP+ + GG +ELV +++ +VKVR+ G + +T++ + + L
Sbjct: 2 KEQVQEVLDKLRPF-IQRDGGDVELVNVEDGVVKVRLLGACGSCPSSTITLKAGIERALM 60
Query: 221 EKIPAIAAVQ 230
E+IP + V+
Sbjct: 61 EEIPGVTEVE 70
>gi|226314372|ref|YP_002774268.1| iron-sulfur cluster assembly protein [Brevibacillus brevis NBRC
100599]
gi|226097322|dbj|BAH45764.1| putative iron-sulfur cluster assembly protein [Brevibacillus brevis
NBRC 100599]
Length = 89
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 54/70 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ ++ VLD++RPYL DGG+V L +++ +V+L+L GACGSCPSS +T+K GIER L+E+
Sbjct: 19 DQVQEVLDKLRPYLQRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEE 78
Query: 145 IPEIVAVESV 154
IP I V+ V
Sbjct: 79 IPGIKEVQQV 88
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ +++VL+++RPYL GG ++LV +++ IVK+R+ G + +T++ + + L E
Sbjct: 19 DQVQEVLDKLRPYL-QRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVE 77
Query: 222 KIPAIAAVQ 230
+IP I VQ
Sbjct: 78 EIPGIKEVQ 86
>gi|417363|sp|P33179.1|NIFU_ANASL RecName: Full=Nitrogen fixation protein NifU
gi|2126543|pir||I39609 nifU protein - Anabaena sp. (fragment)
gi|142056|gb|AAA22013.1| NifU [Anabaena sp. L-31]
Length = 112
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSCPSS T+K+ IE RL ++I
Sbjct: 44 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRI 103
Query: 146 PEIVAVESV 154
+ VE+V
Sbjct: 104 NPSLVVEAV 112
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 168 IEKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLREK 222
I+KVL EE+RP L+ A GG +EL +D IVKV + G + T+++A+ +LR++
Sbjct: 44 IQKVLDEEVRPVLI-ADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDR 102
Query: 223 I 223
I
Sbjct: 103 I 103
>gi|395216626|ref|ZP_10401427.1| nitrogen-fixing NifU domain-containing protein [Pontibacter sp.
BAB1700]
gi|394455289|gb|EJF09780.1| nitrogen-fixing NifU domain-containing protein [Pontibacter sp.
BAB1700]
Length = 88
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
IES LD+IRPYL +DGGNV + E+ D ++L+L GACG+CP S MT+K G+E+ +++ I
Sbjct: 14 IESALDQIRPYLEADGGNVKVLEVTDDMTLKLELLGACGTCPMSTMTLKAGVEQSVLKAI 73
Query: 146 PEIVAVESV 154
PEI AVE+V
Sbjct: 74 PEIKAVEAV 82
>gi|95929342|ref|ZP_01312085.1| nitrogen-fixing NifU-like [Desulfuromonas acetoxidans DSM 684]
gi|95134458|gb|EAT16114.1| nitrogen-fixing NifU-like [Desulfuromonas acetoxidans DSM 684]
Length = 74
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E IE+ LDE+RP L++DGGNV L ++ D VV +KL GACGSCP S +T+KMGIER L+E
Sbjct: 3 EQIEAALDEVRPTLLADGGNVELVDVSDDGVVSVKLVGACGSCPMSTVTLKMGIERILLE 62
Query: 144 KIPEI 148
K+P +
Sbjct: 63 KVPGV 67
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKL 219
+E IE L+E+RP L+ A GG++ELV + D+ +V V++ G +T+++ + + L
Sbjct: 2 KEQIEAALDEVRPTLL-ADGGNVELVDVSDDGVVSVKLVGACGSCPMSTVTLKMGIERIL 60
Query: 220 REKIPAIAAV 229
EK+P + V
Sbjct: 61 LEKVPGVKEV 70
>gi|300771723|ref|ZP_07081598.1| NifU family protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300761712|gb|EFK58533.1| NifU family protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 93
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEID-GNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E LD IRPYL +DGGNV+L EI NVV+LKL GAC SC S+MT K G+E+ + +
Sbjct: 5 ERVEQALDTIRPYLETDGGNVSLEEITPENVVKLKLTGACASCSMSIMTFKAGLEQAIKK 64
Query: 144 KIPEIVAVESV 154
+PEI +VE++
Sbjct: 65 AVPEITSVEAL 75
Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGG-SLELVTIDEPIVKVRITGPAA----GVMTVRVAVTQKLR 220
E +E+ L+ IRPYL G SLE +T E +VK+++TG A +MT + + Q ++
Sbjct: 5 ERVEQALDTIRPYLETDGGNVSLEEIT-PENVVKLKLTGACASCSMSIMTFKAGLEQAIK 63
Query: 221 EKIPAIAAVQLL 232
+ +P I +V+ L
Sbjct: 64 KAVPEITSVEAL 75
>gi|433461579|ref|ZP_20419187.1| hypothetical protein D479_08361 [Halobacillus sp. BAB-2008]
gi|432189911|gb|ELK46967.1| hypothetical protein D479_08361 [Halobacillus sp. BAB-2008]
Length = 73
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 54/70 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E ++ VL+++RP+L+ DGG+V L +++ +VRL+L GACG+CPSS +T+K GIER L ++
Sbjct: 3 EQVQEVLNKLRPFLLRDGGDVELVDVEDGIVRLRLMGACGNCPSSTITLKAGIERALAQE 62
Query: 145 IPEIVAVESV 154
IP I VE V
Sbjct: 63 IPGIYEVEQV 72
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
E +++VL ++RP+L+ GG +ELV +++ IV++R+ G + +T++ + + L +
Sbjct: 3 EQVQEVLNKLRPFLL-RDGGDVELVDVEDGIVRLRLMGACGNCPSSTITLKAGIERALAQ 61
Query: 222 KIPAIAAVQ 230
+IP I V+
Sbjct: 62 EIPGIYEVE 70
>gi|15615981|ref|NP_244286.1| nitrogen fixation protein NifU [Bacillus halodurans C-125]
gi|10176042|dbj|BAB07138.1| nitrogen fixation protein (NifU protein) [Bacillus halodurans
C-125]
Length = 79
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 55/70 (78%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E ++ VLD++RP+L+ DGG+V L +++ +V+++L GACGSCPSS +T+K GIER L+E+
Sbjct: 9 EQVKEVLDKLRPFLLRDGGDVELVDVEDGIVKVRLLGACGSCPSSTITLKAGIERALLEE 68
Query: 145 IPEIVAVESV 154
+P + +E V
Sbjct: 69 VPGVKEIEQV 78
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 51/77 (66%), Gaps = 6/77 (7%)
Query: 158 ETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRV 213
ET E++E+ +++VL+++RP+L+ GG +ELV +++ IVKVR+ G + +T++
Sbjct: 2 ETSTEMHEQ-VKEVLDKLRPFLL-RDGGDVELVDVEDGIVKVRLLGACGSCPSSTITLKA 59
Query: 214 AVTQKLREKIPAIAAVQ 230
+ + L E++P + ++
Sbjct: 60 GIERALLEEVPGVKEIE 76
>gi|227536025|ref|ZP_03966074.1| NifU family protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227244138|gb|EEI94153.1| NifU family protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 93
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEID-GNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E LD IRPYL +DGGNV+L EI NVV+LKL GAC SC S+MT K G+E+ + +
Sbjct: 5 ERVEQALDTIRPYLETDGGNVSLEEITPENVVKLKLTGACASCSMSIMTFKAGLEQAIKK 64
Query: 144 KIPEIVAVESV 154
+PEI +VE++
Sbjct: 65 AVPEITSVEAL 75
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGG-SLELVTIDEPIVKVRITGPAA----GVMTVRVAVTQKLR 220
E +E+ L+ IRPYL G SLE +T E +VK+++TG A +MT + + Q ++
Sbjct: 5 ERVEQALDTIRPYLETDGGNVSLEEIT-PENVVKLKLTGACASCSMSIMTFKAGLEQAIK 63
Query: 221 EKIPAIAAVQLL 232
+ +P I +V+ L
Sbjct: 64 KAVPEITSVEAL 75
>gi|149278153|ref|ZP_01884291.1| hypothetical protein PBAL39_11367 [Pedobacter sp. BAL39]
gi|149230919|gb|EDM36300.1| hypothetical protein PBAL39_11367 [Pedobacter sp. BAL39]
Length = 100
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ +E L+ IRPYLI+DGGNV + EI NVV+LKL G CGSC S MTMK GIE+ +++
Sbjct: 24 QQVEQALETIRPYLIADGGNVEIEEITAENVVKLKLLGNCGSCKMSFMTMKAGIEQAILK 83
Query: 144 KIPEIVAVESV 154
+P+I +V +V
Sbjct: 84 AVPQITSVVAV 94
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
Query: 159 TGLELNEENIEKVLEEIRPYLVGAAGGSLELVTID-EPIVKVRITGPAA----GVMTVRV 213
T ++L ++ +E+ LE IRPYL+ A GG++E+ I E +VK+++ G MT++
Sbjct: 18 TKMDLTQQ-VEQALETIRPYLI-ADGGNVEIEEITAENVVKLKLLGNCGSCKMSFMTMKA 75
Query: 214 AVTQKLREKIPAIAAV 229
+ Q + + +P I +V
Sbjct: 76 GIEQAILKAVPQITSV 91
>gi|386715202|ref|YP_006181525.1| hypothetical protein HBHAL_3909 [Halobacillus halophilus DSM 2266]
gi|384074758|emb|CCG46251.1| conserved hypothetical protein [Halobacillus halophilus DSM 2266]
Length = 73
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 54/70 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E ++ VL+++RP+L+ DGG+V L +++ +VRL+L GACG+CPSS +T+K GIER L ++
Sbjct: 3 EQVQEVLNKLRPFLLRDGGDVELVDVEDGIVRLRLMGACGNCPSSTITLKAGIERALAQE 62
Query: 145 IPEIVAVESV 154
+P I VE V
Sbjct: 63 VPGIYEVEQV 72
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
E +++VL ++RP+L+ GG +ELV +++ IV++R+ G + +T++ + + L +
Sbjct: 3 EQVQEVLNKLRPFLL-RDGGDVELVDVEDGIVRLRLMGACGNCPSSTITLKAGIERALAQ 61
Query: 222 KIPAIAAVQ 230
++P I V+
Sbjct: 62 EVPGIYEVE 70
>gi|410461170|ref|ZP_11314822.1| hypothetical protein BAZO_17911 [Bacillus azotoformans LMG 9581]
gi|409925955|gb|EKN63153.1| hypothetical protein BAZO_17911 [Bacillus azotoformans LMG 9581]
Length = 73
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 54/70 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ +E VL+++RP+L DGG+ L +++ +V+L+L GACGSCPSS +T+K GIER L+E+
Sbjct: 3 QQVEEVLNKLRPFLQRDGGDCELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEE 62
Query: 145 IPEIVAVESV 154
+P IV VE V
Sbjct: 63 VPGIVEVEQV 72
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ +E+VL ++RP+L GG ELV +++ IVK+R+ G + +T++ + + L E
Sbjct: 3 QQVEEVLNKLRPFL-QRDGGDCELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVE 61
Query: 222 KIPAIAAVQ 230
++P I V+
Sbjct: 62 EVPGIVEVE 70
>gi|836637|emb|CAA83509.1| nifU [Nostoc sp. PCC 6720]
gi|1091584|prf||2021269A dinitrogenase reductase
Length = 87
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%), Gaps = 2/70 (2%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC SS T+K+ IE RL ++I
Sbjct: 18 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRI 77
Query: 146 -PEIVAVESV 154
P +V VE+V
Sbjct: 78 NPSLVVVEAV 87
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 7/69 (10%)
Query: 168 IEKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREK 222
I+KVL EE+RP L+ A GG +EL +D IVKV + G ++ T+++A+ +LR++
Sbjct: 18 IQKVLDEEVRPVLI-ADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDR 76
Query: 223 I-PAIAAVQ 230
I P++ V+
Sbjct: 77 INPSLVVVE 85
>gi|407795445|ref|ZP_11142404.1| hypothetical protein MJ3_01045 [Salimicrobium sp. MJ3]
gi|407020330|gb|EKE33043.1| hypothetical protein MJ3_01045 [Salimicrobium sp. MJ3]
Length = 73
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 54/70 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E ++ VL+++RP+L+ DGG+V L +++ +VRL+L GACG+CPSS +T+K GIER L ++
Sbjct: 3 EQVQEVLNKLRPFLLRDGGDVELVDVEDGIVRLRLMGACGNCPSSTITLKAGIERALSQE 62
Query: 145 IPEIVAVESV 154
+P I VE V
Sbjct: 63 VPGIYEVEQV 72
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
E +++VL ++RP+L+ GG +ELV +++ IV++R+ G + +T++ + + L +
Sbjct: 3 EQVQEVLNKLRPFLL-RDGGDVELVDVEDGIVRLRLMGACGNCPSSTITLKAGIERALSQ 61
Query: 222 KIPAIAAVQ 230
++P I V+
Sbjct: 62 EVPGIYEVE 70
>gi|317130102|ref|YP_004096384.1| nitrogen-fixing NifU domain-containing protein [Bacillus
cellulosilyticus DSM 2522]
gi|315475050|gb|ADU31653.1| nitrogen-fixing NifU domain protein [Bacillus cellulosilyticus DSM
2522]
Length = 78
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 54/69 (78%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
++ VLD++RP+L+ DGG+V L +++ +V+++L GACGSCPSS +T+K GIER L+E++
Sbjct: 9 QVQEVLDKLRPFLLRDGGDVELVDVEDGIVKVRLMGACGSCPSSTITLKAGIERALLEEV 68
Query: 146 PEIVAVESV 154
P + +E V
Sbjct: 69 PGVKELEQV 77
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLR 220
E +++VL+++RP+L+ GG +ELV +++ IVKVR+ G + +T++ + + L
Sbjct: 7 ESQVQEVLDKLRPFLL-RDGGDVELVDVEDGIVKVRLMGACGSCPSSTITLKAGIERALL 65
Query: 221 EKIPAIAAVQ 230
E++P + ++
Sbjct: 66 EEVPGVKELE 75
>gi|111608856|gb|ABH10986.1| Fe-S cluster assembly protein NifU [Polytomella parva]
Length = 168
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 14/146 (9%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
L+ EN+ LD IRP L++DGG+V + +I V L+ QG+C +C S TMK GIE L
Sbjct: 32 LSIENVNKSLDYIRPVLMNDGGDVEIVKIQNGKVFLRFQGSCSTCTSQEDTMKGGIETTL 91
Query: 142 M----EKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIV 197
E + EI+ V+ + DE N NI+ L IR + G GG +E+++++ +
Sbjct: 92 RSSFGELLKEIIQVDKLQDEA-----NVINIDAHLNLIRNAIAG-LGGKVEVISVENGVC 145
Query: 198 KVRITGPAAGVMTVRVAVTQKLREKI 223
K+R GP VR V +RE+
Sbjct: 146 KLRYNGPKG----VRKGVDGVIRERF 167
>gi|302392635|ref|YP_003828455.1| nitrogen-fixing NifU domain-containing protein [Acetohalobium
arabaticum DSM 5501]
gi|302204712|gb|ADL13390.1| nitrogen-fixing NifU domain protein [Acetohalobium arabaticum DSM
5501]
Length = 72
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E +E+ LD+IRP L +DGG V L +++ VV++KL GACG CP S MT+K GIER L E+
Sbjct: 3 EEVEAALDKIRPSLEADGGGVELIDVEEGVVKVKLTGACGGCPMSQMTLKNGIERVLKEE 62
Query: 145 IPEIVAVESV 154
IPE+ VESV
Sbjct: 63 IPEVEKVESV 72
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGV----MTVRVAVTQKLRE 221
E +E L++IRP L A GG +EL+ ++E +VKV++TG G MT++ + + L+E
Sbjct: 3 EEVEAALDKIRPSLE-ADGGGVELIDVEEGVVKVKLTGACGGCPMSQMTLKNGIERVLKE 61
Query: 222 KIPAIAAVQ 230
+IP + V+
Sbjct: 62 EIPEVEKVE 70
>gi|323450669|gb|EGB06549.1| hypothetical protein AURANDRAFT_9527, partial [Aureococcus
anophagefferens]
Length = 69
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVAL--HEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ EN++ VLD++RPYL++DGGNVA+ + D V L L+GACGSCPSS TMKMGIER
Sbjct: 2 FSLENVDKVLDQVRPYLVADGGNVAVVSADPDSKDVILHLEGACGSCPSSTQTMKMGIER 61
Query: 140 RLMEKIPE 147
L E+ +
Sbjct: 62 VLRERWAD 69
>gi|392968034|ref|ZP_10333450.1| nitrogen-fixing NifU domain protein [Fibrisoma limi BUZ 3]
gi|387842396|emb|CCH55504.1| nitrogen-fixing NifU domain protein [Fibrisoma limi BUZ 3]
Length = 88
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
IE LD +RPYL +DGGNV + E+ + NVVRL+L G+CGSCP S MT K G+E +++ +
Sbjct: 14 IERALDSMRPYLEADGGNVKILEVTNDNVVRLELMGSCGSCPMSAMTFKGGLEEAILKAV 73
Query: 146 PEIVAVESV 154
PEI VE+V
Sbjct: 74 PEIAKVEAV 82
>gi|312132200|ref|YP_003999540.1| nitrogen-fixing protein NifU domain-containing protein
[Leadbetterella byssophila DSM 17132]
gi|311908746|gb|ADQ19187.1| nitrogen-fixing NifU domain protein [Leadbetterella byssophila DSM
17132]
Length = 83
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
+E LD IRPYLI+DGGNV + EI + VV+L+ G+CGSCP S MT K G+E +++ +
Sbjct: 8 VEQALDNIRPYLIADGGNVKVLEITEDKVVKLEFTGSCGSCPMSSMTFKAGLEEAILKNV 67
Query: 146 PEIVAVESV 154
PEI +VE+V
Sbjct: 68 PEIKSVEAV 76
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 168 IEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAGV----MTVRVAVTQKLREK 222
+E+ L+ IRPYL+ A GG+++++ I E +VK+ TG MT + + + + +
Sbjct: 8 VEQALDNIRPYLI-ADGGNVKVLEITEDKVVKLEFTGSCGSCPMSSMTFKAGLEEAILKN 66
Query: 223 IPAIAAVQ 230
+P I +V+
Sbjct: 67 VPEIKSVE 74
>gi|75910119|ref|YP_324415.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
gi|7387938|sp|Q43885.1|NIFU_ANAAZ RecName: Full=Nitrogen fixation protein NifU
gi|762779|gb|AAA87250.1| NifU gene product [Trichormus azollae]
gi|75703844|gb|ABA23520.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
Length = 300
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 5/86 (5%)
Query: 74 PDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPS 128
P+S + PLT I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC S
Sbjct: 215 PNSGQKRPLTNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSS 274
Query: 129 SVMTMKMGIERRLMEKIPEIVAVESV 154
S T+K+ IE RL ++I + VE+V
Sbjct: 275 STATLKIAIESRLRDRINPSLVVEAV 300
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Query: 168 IEKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREK 222
I+KVL EE+RP L+ A GG +EL +D IVKV + G ++ T+++A+ +LR++
Sbjct: 232 IQKVLDEEVRPVLI-ADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDR 290
Query: 223 I 223
I
Sbjct: 291 I 291
>gi|17228950|ref|NP_485498.1| nitrogen fixation protein [Nostoc sp. PCC 7120]
gi|128316|sp|P20628.1|NIFU_NOSS1 RecName: Full=Nitrogen fixation protein NifU
gi|97707|pir||D34443 nitrogen fixation protein nifU - Anabaena sp
gi|142038|gb|AAA22007.1| nifU [Nostoc sp. PCC 7120]
gi|17130802|dbj|BAB73412.1| nitrogen fixation protein [Nostoc sp. PCC 7120]
Length = 300
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 5/86 (5%)
Query: 74 PDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPS 128
P+S + PLT I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC S
Sbjct: 215 PNSGQKRPLTNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSS 274
Query: 129 SVMTMKMGIERRLMEKIPEIVAVESV 154
S T+K+ IE RL ++I + VE+V
Sbjct: 275 STATLKIAIESRLRDRINPSLVVEAV 300
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Query: 168 IEKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREK 222
I+KVL EE+RP L+ A GG +EL +D IVKV + G ++ T+++A+ +LR++
Sbjct: 232 IQKVLDEEVRPVLI-ADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDR 290
Query: 223 I 223
I
Sbjct: 291 I 291
>gi|239799267|dbj|BAH70563.1| ACYPI005854 [Acyrthosiphon pisum]
Length = 254
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ D +V+LKLQG+C SCPSSV+T+K G++ L I
Sbjct: 159 IKELLDSRIRPTVQEDGGDILFIGYDAGIVKLKLQGSCTSCPSSVVTLKGGVQNMLQFYI 218
Query: 146 PEIVAVESVADE-ETGLELNEENIEKVLEE 174
PE++AVE V DE E ++ E EK LEE
Sbjct: 219 PEVIAVEQVEDEIEIRTKVEFEKFEKKLEE 248
>gi|193599106|ref|XP_001949519.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Acyrthosiphon pisum]
Length = 254
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Query: 83 TAENIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
T I+ +LD IRP + DGG++ D +V+LKLQG+C SCPSSV+T+K G++ L
Sbjct: 155 TVMMIKELLDSRIRPTVQEDGGDILFIGYDAGIVKLKLQGSCTSCPSSVVTLKGGVQYML 214
Query: 142 MEKIPEIVAVESVADE-ETGLELNEENIEKVLEE 174
IPE++AVE V DE E ++ E EK LEE
Sbjct: 215 QFYIPEVIAVEQVEDEIEIRTKVEFEKFEKKLEE 248
>gi|337287610|ref|YP_004627082.1| nitrogen-fixing NifU domain-containing protein
[Thermodesulfobacterium sp. OPB45]
gi|334901348|gb|AEH22154.1| nitrogen-fixing NifU domain-containing protein
[Thermodesulfobacterium geofontis OPF15]
Length = 74
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERR 140
+ + +E L ++RPYL +DGG+V L E+ + VV++KL+GACGSCP ++MT+KMGIER
Sbjct: 1 MLKDEVEKALSKVRPYLQADGGDVELVEVTEDGVVKVKLKGACGSCPMALMTLKMGIERY 60
Query: 141 LMEKIPEIVAVESV 154
L ++IPE+ V +V
Sbjct: 61 LKKEIPEVTEVIAV 74
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAA----GVMTVRVAVTQKL 219
++ +EK L ++RPYL A GG +ELV + E +VKV++ G +MT+++ + + L
Sbjct: 3 KDEVEKALSKVRPYL-QADGGDVELVEVTEDGVVKVKLKGACGSCPMALMTLKMGIERYL 61
Query: 220 REKIPAIAAV 229
+++IP + V
Sbjct: 62 KKEIPEVTEV 71
>gi|27467548|ref|NP_764185.1| nitrogen fixation protein NifU [Staphylococcus epidermidis ATCC
12228]
gi|57866465|ref|YP_188114.1| NifU domain-containing protein [Staphylococcus epidermidis RP62A]
gi|242242226|ref|ZP_04796671.1| NifU family protein [Staphylococcus epidermidis W23144]
gi|251810309|ref|ZP_04824782.1| NifU family protein [Staphylococcus epidermidis BCM-HMP0060]
gi|293368312|ref|ZP_06614940.1| NifU domain protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|416123938|ref|ZP_11595124.1| nifU-like domain protein [Staphylococcus epidermidis FRI909]
gi|417646565|ref|ZP_12296420.1| NifU-like protein [Staphylococcus epidermidis VCU144]
gi|417656361|ref|ZP_12306048.1| NifU-like protein [Staphylococcus epidermidis VCU028]
gi|417658592|ref|ZP_12308216.1| NifU-like protein [Staphylococcus epidermidis VCU045]
gi|417910032|ref|ZP_12553764.1| NifU-like protein [Staphylococcus epidermidis VCU037]
gi|417911758|ref|ZP_12555458.1| NifU-like protein [Staphylococcus epidermidis VCU105]
gi|417913515|ref|ZP_12557181.1| NifU-like protein [Staphylococcus epidermidis VCU109]
gi|418326502|ref|ZP_12937686.1| NifU-like protein [Staphylococcus epidermidis VCU071]
gi|418327576|ref|ZP_12938728.1| NifU-like protein [Staphylococcus epidermidis 14.1.R1.SE]
gi|418411392|ref|ZP_12984660.1| hypothetical protein HMPREF9281_00264 [Staphylococcus epidermidis
BVS058A4]
gi|418604240|ref|ZP_13167600.1| NifU-like protein [Staphylococcus epidermidis VCU041]
gi|418608258|ref|ZP_13171463.1| NifU-like protein [Staphylococcus epidermidis VCU057]
gi|418609294|ref|ZP_13172451.1| NifU-like protein [Staphylococcus epidermidis VCU065]
gi|418611357|ref|ZP_13174447.1| NifU-like protein [Staphylococcus epidermidis VCU117]
gi|418615864|ref|ZP_13178799.1| NifU-like protein [Staphylococcus epidermidis VCU118]
gi|418617222|ref|ZP_13180126.1| NifU-like protein [Staphylococcus epidermidis VCU120]
gi|418620997|ref|ZP_13183787.1| NifU-like protein [Staphylococcus epidermidis VCU123]
gi|418624320|ref|ZP_13186996.1| NifU-like protein [Staphylococcus epidermidis VCU125]
gi|418626693|ref|ZP_13189290.1| NifU-like protein [Staphylococcus epidermidis VCU126]
gi|418628890|ref|ZP_13191410.1| NifU-like protein [Staphylococcus epidermidis VCU127]
gi|418632584|ref|ZP_13195014.1| NifU-like protein [Staphylococcus epidermidis VCU128]
gi|418633465|ref|ZP_13195880.1| NifU-like protein [Staphylococcus epidermidis VCU129]
gi|418663803|ref|ZP_13225310.1| NifU-like protein [Staphylococcus epidermidis VCU081]
gi|419770088|ref|ZP_14296174.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-250]
gi|419770753|ref|ZP_14296820.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-K]
gi|420162795|ref|ZP_14669550.1| NifU domain protein [Staphylococcus epidermidis NIHLM095]
gi|420166875|ref|ZP_14673553.1| NifU domain protein [Staphylococcus epidermidis NIHLM088]
gi|420167238|ref|ZP_14673899.1| NifU domain protein [Staphylococcus epidermidis NIHLM087]
gi|420171327|ref|ZP_14677871.1| NifU domain protein [Staphylococcus epidermidis NIHLM070]
gi|420172172|ref|ZP_14678687.1| NifU domain protein [Staphylococcus epidermidis NIHLM067]
gi|420175305|ref|ZP_14681745.1| NifU domain protein [Staphylococcus epidermidis NIHLM061]
gi|420177632|ref|ZP_14683968.1| NifU domain protein [Staphylococcus epidermidis NIHLM057]
gi|420179415|ref|ZP_14685708.1| NifU domain protein [Staphylococcus epidermidis NIHLM053]
gi|420182565|ref|ZP_14688701.1| NifU domain protein [Staphylococcus epidermidis NIHLM049]
gi|420185272|ref|ZP_14691367.1| NifU domain protein [Staphylococcus epidermidis NIHLM040]
gi|420187836|ref|ZP_14693852.1| NifU domain protein [Staphylococcus epidermidis NIHLM039]
gi|420189209|ref|ZP_14695193.1| NifU domain protein [Staphylococcus epidermidis NIHLM037]
gi|420193303|ref|ZP_14699157.1| NifU domain protein [Staphylococcus epidermidis NIHLM023]
gi|420194397|ref|ZP_14700211.1| NifU domain protein [Staphylococcus epidermidis NIHLM021]
gi|420198256|ref|ZP_14703971.1| NifU domain protein [Staphylococcus epidermidis NIHLM020]
gi|420199649|ref|ZP_14705320.1| NifU domain protein [Staphylococcus epidermidis NIHLM031]
gi|420203131|ref|ZP_14708715.1| NifU domain protein [Staphylococcus epidermidis NIHLM018]
gi|420203845|ref|ZP_14709406.1| NifU domain protein [Staphylococcus epidermidis NIHLM015]
gi|420206726|ref|ZP_14712231.1| NifU domain protein [Staphylococcus epidermidis NIHLM008]
gi|420210365|ref|ZP_14715793.1| NifU domain protein [Staphylococcus epidermidis NIHLM003]
gi|420212027|ref|ZP_14717382.1| NifU domain protein [Staphylococcus epidermidis NIHLM001]
gi|420215565|ref|ZP_14720830.1| NifU domain protein [Staphylococcus epidermidis NIH05005]
gi|420218289|ref|ZP_14723385.1| NifU domain protein [Staphylococcus epidermidis NIH05001]
gi|420221133|ref|ZP_14726086.1| NifU domain protein [Staphylococcus epidermidis NIH04008]
gi|420222248|ref|ZP_14727170.1| NifU-like protein [Staphylococcus epidermidis NIH08001]
gi|420225174|ref|ZP_14730009.1| NifU-like protein [Staphylococcus epidermidis NIH06004]
gi|420226753|ref|ZP_14731531.1| NifU-like protein [Staphylococcus epidermidis NIH05003]
gi|420229073|ref|ZP_14733783.1| NifU-like protein [Staphylococcus epidermidis NIH04003]
gi|420231435|ref|ZP_14736085.1| NifU-like protein [Staphylococcus epidermidis NIH051668]
gi|420234099|ref|ZP_14738671.1| NifU-like protein [Staphylococcus epidermidis NIH051475]
gi|421607554|ref|ZP_16048793.1| NifU domain-containing protein [Staphylococcus epidermidis AU12-03]
gi|27315092|gb|AAO04227.1|AE016746_17 nitrogen fixation protein NifU [Staphylococcus epidermidis ATCC
12228]
gi|57637123|gb|AAW53911.1| NifU domain protein [Staphylococcus epidermidis RP62A]
gi|242234321|gb|EES36633.1| NifU family protein [Staphylococcus epidermidis W23144]
gi|251806191|gb|EES58848.1| NifU family protein [Staphylococcus epidermidis BCM-HMP0060]
gi|291317559|gb|EFE57977.1| NifU domain protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|319401786|gb|EFV89994.1| nifU-like domain protein [Staphylococcus epidermidis FRI909]
gi|329726827|gb|EGG63287.1| NifU-like protein [Staphylococcus epidermidis VCU144]
gi|329736812|gb|EGG73077.1| NifU-like protein [Staphylococcus epidermidis VCU028]
gi|329737604|gb|EGG73850.1| NifU-like protein [Staphylococcus epidermidis VCU045]
gi|341651914|gb|EGS75705.1| NifU-like protein [Staphylococcus epidermidis VCU037]
gi|341652269|gb|EGS76058.1| NifU-like protein [Staphylococcus epidermidis VCU105]
gi|341655325|gb|EGS79054.1| NifU-like protein [Staphylococcus epidermidis VCU109]
gi|365225423|gb|EHM66667.1| NifU-like protein [Staphylococcus epidermidis VCU071]
gi|365232829|gb|EHM73805.1| NifU-like protein [Staphylococcus epidermidis 14.1.R1.SE]
gi|374402135|gb|EHQ73177.1| NifU-like protein [Staphylococcus epidermidis VCU057]
gi|374405462|gb|EHQ76396.1| NifU-like protein [Staphylococcus epidermidis VCU041]
gi|374408074|gb|EHQ78913.1| NifU-like protein [Staphylococcus epidermidis VCU065]
gi|374411128|gb|EHQ81847.1| NifU-like protein [Staphylococcus epidermidis VCU081]
gi|374816049|gb|EHR80265.1| NifU-like protein [Staphylococcus epidermidis VCU118]
gi|374819069|gb|EHR83200.1| NifU-like protein [Staphylococcus epidermidis VCU120]
gi|374823443|gb|EHR87439.1| NifU-like protein [Staphylococcus epidermidis VCU117]
gi|374827838|gb|EHR91695.1| NifU-like protein [Staphylococcus epidermidis VCU125]
gi|374830856|gb|EHR94616.1| NifU-like protein [Staphylococcus epidermidis VCU123]
gi|374831467|gb|EHR95207.1| NifU-like protein [Staphylococcus epidermidis VCU126]
gi|374832154|gb|EHR95874.1| NifU-like protein [Staphylococcus epidermidis VCU128]
gi|374835270|gb|EHR98889.1| NifU-like protein [Staphylococcus epidermidis VCU127]
gi|374839310|gb|EHS02825.1| NifU-like protein [Staphylococcus epidermidis VCU129]
gi|383357551|gb|EID35020.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-250]
gi|383363099|gb|EID40444.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-K]
gi|394232088|gb|EJD77707.1| NifU domain protein [Staphylococcus epidermidis NIHLM088]
gi|394235792|gb|EJD81342.1| NifU domain protein [Staphylococcus epidermidis NIHLM095]
gi|394238200|gb|EJD83678.1| NifU domain protein [Staphylococcus epidermidis NIHLM070]
gi|394238867|gb|EJD84324.1| NifU domain protein [Staphylococcus epidermidis NIHLM087]
gi|394243643|gb|EJD89005.1| NifU domain protein [Staphylococcus epidermidis NIHLM067]
gi|394243767|gb|EJD89128.1| NifU domain protein [Staphylococcus epidermidis NIHLM061]
gi|394248016|gb|EJD93258.1| NifU domain protein [Staphylococcus epidermidis NIHLM057]
gi|394250110|gb|EJD95312.1| NifU domain protein [Staphylococcus epidermidis NIHLM049]
gi|394253930|gb|EJD98918.1| NifU domain protein [Staphylococcus epidermidis NIHLM053]
gi|394255006|gb|EJD99966.1| NifU domain protein [Staphylococcus epidermidis NIHLM040]
gi|394255681|gb|EJE00628.1| NifU domain protein [Staphylococcus epidermidis NIHLM039]
gi|394260155|gb|EJE04975.1| NifU domain protein [Staphylococcus epidermidis NIHLM023]
gi|394262848|gb|EJE07603.1| NifU domain protein [Staphylococcus epidermidis NIHLM037]
gi|394264642|gb|EJE09317.1| NifU domain protein [Staphylococcus epidermidis NIHLM020]
gi|394264787|gb|EJE09458.1| NifU domain protein [Staphylococcus epidermidis NIHLM021]
gi|394268462|gb|EJE13019.1| NifU domain protein [Staphylococcus epidermidis NIHLM018]
gi|394271399|gb|EJE15892.1| NifU domain protein [Staphylococcus epidermidis NIHLM031]
gi|394274427|gb|EJE18848.1| NifU domain protein [Staphylococcus epidermidis NIHLM015]
gi|394276417|gb|EJE20757.1| NifU domain protein [Staphylococcus epidermidis NIHLM003]
gi|394276829|gb|EJE21162.1| NifU domain protein [Staphylococcus epidermidis NIHLM008]
gi|394280294|gb|EJE24578.1| NifU domain protein [Staphylococcus epidermidis NIHLM001]
gi|394282063|gb|EJE26276.1| NifU domain protein [Staphylococcus epidermidis NIH05005]
gi|394284580|gb|EJE28688.1| NifU domain protein [Staphylococcus epidermidis NIH05001]
gi|394285092|gb|EJE29178.1| NifU domain protein [Staphylococcus epidermidis NIH04008]
gi|394289484|gb|EJE33365.1| NifU-like protein [Staphylococcus epidermidis NIH08001]
gi|394293918|gb|EJE37615.1| NifU-like protein [Staphylococcus epidermidis NIH06004]
gi|394298202|gb|EJE41782.1| NifU-like protein [Staphylococcus epidermidis NIH05003]
gi|394299598|gb|EJE43137.1| NifU-like protein [Staphylococcus epidermidis NIH04003]
gi|394302661|gb|EJE46099.1| NifU-like protein [Staphylococcus epidermidis NIH051668]
gi|394304596|gb|EJE47994.1| NifU-like protein [Staphylococcus epidermidis NIH051475]
gi|406656759|gb|EKC83159.1| NifU domain-containing protein [Staphylococcus epidermidis AU12-03]
gi|410892936|gb|EKS40727.1| hypothetical protein HMPREF9281_00264 [Staphylococcus epidermidis
BVS058A4]
Length = 80
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 54/76 (71%)
Query: 79 ELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 138
E P + + V++ +RP+L+ DGG+ L +++ +V+L+L GACG+CPSS +T+K GIE
Sbjct: 4 ENPTMFDQVAEVIERLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIE 63
Query: 139 RRLMEKIPEIVAVESV 154
R L E++P ++ VE V
Sbjct: 64 RALHEEVPGVIEVEQV 79
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ + +V+E +RP+L+ GG LV +++ IVK+++ G + +T++ + + L E
Sbjct: 10 DQVAEVIERLRPFLL-RDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHE 68
Query: 222 KIPAIAAVQ 230
++P + V+
Sbjct: 69 EVPGVIEVE 77
>gi|58177342|pdb|1XHJ|A Chain A, Solution Structure Of The Staphylococcus Epidermidis
Protein Se0630. Northest Structural Genomics Consortium
Target Ser8
Length = 88
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 54/76 (71%)
Query: 79 ELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 138
E P + + V++ +RP+L+ DGG+ L +++ +V+L+L GACG+CPSS +T+K GIE
Sbjct: 4 ENPTMFDQVAEVIERLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIE 63
Query: 139 RRLMEKIPEIVAVESV 154
R L E++P ++ VE V
Sbjct: 64 RALHEEVPGVIEVEQV 79
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ + +V+E +RP+L+ GG LV +++ IVK+++ G + +T++ + + L E
Sbjct: 10 DQVAEVIERLRPFLL-RDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHE 68
Query: 222 KIPAIAAVQ 230
++P + V+
Sbjct: 69 EVPGVIEVE 77
>gi|435853944|ref|YP_007315263.1| thioredoxin-like protein [Halobacteroides halobius DSM 5150]
gi|433670355|gb|AGB41170.1| thioredoxin-like protein [Halobacteroides halobius DSM 5150]
Length = 73
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E VL+EIRP L +DGG+V L E+ D +V+++LQGAC CP S MT+K GIE+RL +
Sbjct: 3 EKVEKVLNEIRPSLQADGGDVELVEVTDEGIVKVELQGACAGCPMSQMTLKNGIEKRLKK 62
Query: 144 KIPEIVAVESV 154
+IPE+ V+SV
Sbjct: 63 EIPEVKEVQSV 73
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVTQKLR 220
E +EKVL EIRP L A GG +ELV + DE IVKV + G AG MT++ + ++L+
Sbjct: 3 EKVEKVLNEIRPSL-QADGGDVELVEVTDEGIVKVELQGACAGCPMSQMTLKNGIEKRLK 61
Query: 221 EKIPAIAAVQ 230
++IP + VQ
Sbjct: 62 KEIPEVKEVQ 71
>gi|401423674|ref|XP_003876323.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492565|emb|CBZ27842.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 281
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 54/81 (66%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP L +DGGNV ++D V L L+GAC SCPSS +T+K GIER LM IPE+V +
Sbjct: 193 IRPMLRADGGNVRFIDMDEGTVFLLLEGACKSCPSSHITLKSGIERMLMHWIPEVVEAQE 252
Query: 154 VADEETGLELNEENIEKVLEE 174
V+DE L+E+ + K L+E
Sbjct: 253 VSDEVAADILSEKRLRKQLKE 273
>gi|154339123|ref|XP_001562253.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062836|emb|CAM39281.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 282
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 55/81 (67%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP L +DGGNV ++D V L L+GAC SCPSS +T+K GIER LM IPE+V V+
Sbjct: 194 IRPMLRADGGNVRFIDMDEGTVFLLLEGACKSCPSSHITLKSGIERMLMHWIPEVVEVQE 253
Query: 154 VADEETGLELNEENIEKVLEE 174
V+DE L+E+ + K ++E
Sbjct: 254 VSDEVAADILSEKRLRKQMKE 274
>gi|313675047|ref|YP_004053043.1| nitrogen-fixing nifu domain protein [Marivirga tractuosa DSM 4126]
gi|312941745|gb|ADR20935.1| nitrogen-fixing NifU domain protein [Marivirga tractuosa DSM 4126]
Length = 91
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 52/70 (74%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ IE LD IRPYL +DGGNV + +++ V+RL+L GACG+CP S MT+K G+E + +
Sbjct: 5 DRIEKALDSIRPYLEADGGNVRILDLNEGVLRLELLGACGNCPMSTMTLKAGVEEAVKKS 64
Query: 145 IPEIVAVESV 154
+PE+ +VE+V
Sbjct: 65 VPEVTSVEAV 74
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAG----VMTVRVAVTQKLRE 221
+ IEK L+ IRPYL A GG++ ++ ++E ++++ + G MT++ V + +++
Sbjct: 5 DRIEKALDSIRPYL-EADGGNVRILDLNEGVLRLELLGACGNCPMSTMTLKAGVEEAVKK 63
Query: 222 KIPAIAAVQ 230
+P + +V+
Sbjct: 64 SVPEVTSVE 72
>gi|401397593|ref|XP_003880092.1| at4g25910 protein, related [Neospora caninum Liverpool]
gi|325114501|emb|CBZ50057.1| at4g25910 protein, related [Neospora caninum Liverpool]
Length = 285
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 82/148 (55%), Gaps = 8/148 (5%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGN--VVRLKLQGACGSCPSSVMTMKMGIER 139
L + +E VL+ +RPYL S GGNV L E+D + RL +GAC CPS+ T+ G++
Sbjct: 59 LNSTMVEQVLESVRPYLRSHGGNVKLVELDSENRIARLAFKGACSGCPSAQQTLYEGLQG 118
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPY--LVGAAGGSLELVTIDEP-I 196
L E P+I VE D+ EL+ I+ V E +R + G SLE++++
Sbjct: 119 ALREVWPDI-RVEEAQDDGVWEELSSLTIDSVNEALRGTRPAIERLGASLEVLSVSPSGD 177
Query: 197 VKVRITGPAAGVMTVRVAVTQKLREKIP 224
+ +R GP A T+R+ V +LR+K+P
Sbjct: 178 IVIRYQGPNA--QTIRIGVEMELRDKLP 203
>gi|157167461|ref|XP_001654807.1| hypothetical protein AaeL_AAEL002148 [Aedes aegypti]
gi|108882432|gb|EAT46657.1| AAEL002148-PA [Aedes aegypti]
Length = 263
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 83 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
T + I+ +LD +IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L
Sbjct: 166 TVQMIKELLDSKIRPTVQEDGGDIIFMAFEDGVVKLKMQGSCSSCPSSIVTLKNGVQNML 225
Query: 142 MEKIPEIVAVESVADEETGLELNEENIEKVLEEIR 176
IPE+VAVE V D+ E+ E EK ++I+
Sbjct: 226 QFYIPEVVAVEQVFDKVD--EVTETEFEKFEKQIK 258
>gi|298528227|ref|ZP_07015631.1| nitrogen-fixing NifU domain protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511879|gb|EFI35781.1| nitrogen-fixing NifU domain protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 73
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ VL++IRP L +DGG+V L E+ + NVV+++LQGAC CP S MT+K GIER +M+
Sbjct: 3 EQVQEVLEKIRPSLQADGGDVELVEVTEDNVVKVQLQGACKGCPMSQMTLKNGIERLIMQ 62
Query: 144 KIPEIVAVESV 154
++P+I +VESV
Sbjct: 63 ELPQIKSVESV 73
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAGV----MTVRVAVTQKLR 220
E +++VLE+IRP L A GG +ELV + E +VKV++ G G MT++ + + +
Sbjct: 3 EQVQEVLEKIRPSL-QADGGDVELVEVTEDNVVKVQLQGACKGCPMSQMTLKNGIERLIM 61
Query: 221 EKIPAIAAVQ 230
+++P I +V+
Sbjct: 62 QELPQIKSVE 71
>gi|301064688|ref|ZP_07205077.1| NifU-like protein [delta proteobacterium NaphS2]
gi|300441230|gb|EFK05606.1| NifU-like protein [delta proteobacterium NaphS2]
Length = 75
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ L+++RP L +DGG+V L ++D N +V++KL GACG CP S MT+KMGIE+ L +
Sbjct: 5 EKVQDALEKVRPSLQADGGDVQLVDVDANGLVKVKLTGACGGCPMSQMTLKMGIEKVLKQ 64
Query: 144 KIPEIVAVES 153
+PE+ +VES
Sbjct: 65 NVPEVTSVES 74
>gi|427708715|ref|YP_007051092.1| Modular FeS cluster scaffolding protein NifU [Nostoc sp. PCC 7107]
gi|427361220|gb|AFY43942.1| Modular FeS cluster scaffolding protein NifU [Nostoc sp. PCC 7107]
Length = 306
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L++I+GN V++ LQGACGSC SS T+K+ IE RL ++I
Sbjct: 234 IQKVLDEEVRPVLIADGGDVELYDIEGNTVKVILQGACGSCSSSTATLKIAIESRLRDRI 293
Query: 146 PEIVAVESV 154
+ + V++V
Sbjct: 294 SKDIVVQAV 302
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 15/128 (11%)
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLM---------EKIPEIVAVESVADEETGLELNEEN 167
+K G CGSC + + + +++ + ++ PEI+ +A +
Sbjct: 174 VKAGGGCGSCLTKIDDIIKEVKQEVATASKNGNNGKQNPEILNSGQIATKPLTNVQKIAL 233
Query: 168 IEKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREK 222
I+KVL EE+RP L+ A GG +EL I+ VKV + G ++ T+++A+ +LR++
Sbjct: 234 IQKVLDEEVRPVLI-ADGGDVELYDIEGNTVKVILQGACGSCSSSTATLKIAIESRLRDR 292
Query: 223 IPAIAAVQ 230
I VQ
Sbjct: 293 ISKDIVVQ 300
>gi|402300060|ref|ZP_10819612.1| nitrogen fixation protein [Bacillus alcalophilus ATCC 27647]
gi|401724783|gb|EJS98113.1| nitrogen fixation protein [Bacillus alcalophilus ATCC 27647]
Length = 80
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 83 TAENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
T + + VLD++RP+L+ DGG+V L ++ + +V+++L GACGSCPSS +T+K GIER L
Sbjct: 7 TFDQVREVLDKLRPFLLRDGGDVELVDVSEDGIVQVRLLGACGSCPSSTITLKAGIERAL 66
Query: 142 MEKIPEIVAVESV 154
+E++P I +E V
Sbjct: 67 LEEVPGITEIEQV 79
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPA----AGVMTVRVAVTQKLR 220
+ + +VL+++RP+L+ GG +ELV + E IV+VR+ G + +T++ + + L
Sbjct: 9 DQVREVLDKLRPFLL-RDGGDVELVDVSEDGIVQVRLLGACGSCPSSTITLKAGIERALL 67
Query: 221 EKIPAIAAVQ 230
E++P I ++
Sbjct: 68 EEVPGITEIE 77
>gi|428297141|ref|YP_007135447.1| Fe-S cluster assembly protein NifU [Calothrix sp. PCC 6303]
gi|428233685|gb|AFY99474.1| Fe-S cluster assembly protein NifU [Calothrix sp. PCC 6303]
Length = 302
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC SS T+K+ IE RL ++I
Sbjct: 228 IQKVLDEEVRPVLIADGGDVELYDVDGDIVQVLLQGACGSCSSSTATLKIAIEARLRDRI 287
Query: 146 PEIVAVESVA 155
+ V+SV
Sbjct: 288 SPNIVVQSVG 297
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 17/126 (13%)
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEK-------IPEIVAVESVADEETGLELNEENIE 169
+K G CGSC +++ + I+ + EK IP I E T ++ I+
Sbjct: 174 VKAGGGCGSCLATIDDI---IQSVINEKPVSITANIPSINTTEVTPRPLTNVQ-KIALIQ 229
Query: 170 KVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREKIP 224
KVL EE+RP L+ A GG +EL +D IV+V + G ++ T+++A+ +LR++I
Sbjct: 230 KVLDEEVRPVLI-ADGGDVELYDVDGDIVQVLLQGACGSCSSSTATLKIAIEARLRDRIS 288
Query: 225 AIAAVQ 230
VQ
Sbjct: 289 PNIVVQ 294
>gi|408356206|ref|YP_006844737.1| hypothetical protein AXY_08430 [Amphibacillus xylanus NBRC 15112]
gi|407726977|dbj|BAM46975.1| hypothetical protein AXY_08430 [Amphibacillus xylanus NBRC 15112]
Length = 73
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 53/70 (75%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E ++ L+++RP+L+ DGG+V L E++ +VRL+L GACGSCPSS++T+K GIER L+
Sbjct: 3 EQVQEALNKLRPFLLRDGGDVELVEVNDGIVRLRLLGACGSCPSSMITLKAGIERALVSA 62
Query: 145 IPEIVAVESV 154
+P + +E +
Sbjct: 63 VPGVREIEQI 72
>gi|73663148|ref|YP_301929.1| hypothetical protein SSP1839 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|392971566|ref|ZP_10336960.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
equorum subsp. equorum Mu2]
gi|403047117|ref|ZP_10902585.1| hypothetical protein SOJ_21940 [Staphylococcus sp. OJ82]
gi|418576726|ref|ZP_13140859.1| hypothetical protein SSME_19150 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|72495663|dbj|BAE18984.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|379324883|gb|EHY92028.1| hypothetical protein SSME_19150 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|392510453|emb|CCI60246.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
equorum subsp. equorum Mu2]
gi|402762651|gb|EJX16745.1| hypothetical protein SOJ_21940 [Staphylococcus sp. OJ82]
Length = 80
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 54/70 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + V++++RP+L+ DGG+ +L +++ +V+L+L GACG+CPSS +T+K GIER L E+
Sbjct: 10 DQVAEVIEKLRPFLLRDGGDCSLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEE 69
Query: 145 IPEIVAVESV 154
+P ++ VE V
Sbjct: 70 VPGVIEVEQV 79
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ + +V+E++RP+L+ GG LV +++ IVK+++ G + +T++ + + L E
Sbjct: 10 DQVAEVIEKLRPFLL-RDGGDCSLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHE 68
Query: 222 KIPAIAAVQ 230
++P + V+
Sbjct: 69 EVPGVIEVE 77
>gi|347964133|ref|XP_310479.5| AGAP000598-PA [Anopheles gambiae str. PEST]
gi|333466873|gb|EAA06366.5| AGAP000598-PA [Anopheles gambiae str. PEST]
Length = 273
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 83 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
T + I+ +LD IRP + DGG++ D VV+LK+QG+C SCPSS++T+K G++ L
Sbjct: 169 TVQMIKELLDTRIRPTVQEDGGDIIFMGFDDGVVKLKMQGSCSSCPSSIVTLKNGVQNML 228
Query: 142 MEKIPEIVAVESVADEETGLELNEENIEKVLEEIR 176
IPE+V+VE V DE ++ E+ ++ ++IR
Sbjct: 229 QFYIPEVVSVEQVTDEAD--KVAEQEFSRLEKQIR 261
>gi|427728484|ref|YP_007074721.1| Fe-S cluster assembly protein NifU [Nostoc sp. PCC 7524]
gi|427364403|gb|AFY47124.1| Fe-S cluster assembly protein NifU [Nostoc sp. PCC 7524]
Length = 300
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC SS T+K+ IE RL ++I
Sbjct: 232 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRI 291
Query: 146 PEIVAVESV 154
+ VE+V
Sbjct: 292 NPSLVVEAV 300
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Query: 168 IEKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREK 222
I+KVL EE+RP L+ A GG +EL +D IVKV + G ++ T+++A+ +LR++
Sbjct: 232 IQKVLDEEVRPVLI-ADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDR 290
Query: 223 I 223
I
Sbjct: 291 I 291
>gi|119509287|ref|ZP_01628437.1| nitrogen fixation protein [Nodularia spumigena CCY9414]
gi|119466129|gb|EAW47016.1| nitrogen fixation protein [Nodularia spumigena CCY9414]
Length = 312
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 63/91 (69%), Gaps = 5/91 (5%)
Query: 70 AVATPDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACG 124
+VA +S PLT I+ VLDE +RP LI+DGG+V L++++G+ V++ LQGACG
Sbjct: 221 SVAVANSQQSKPLTNVQRIALIQKVLDEEVRPVLIADGGDVELYDVEGDKVKVVLQGACG 280
Query: 125 SCPSSVMTMKMGIERRLMEKIPEIVAVESVA 155
SC SS T+K+ IE RL +++ + + VE+VA
Sbjct: 281 SCSSSTATLKIAIEARLQDRVSKNLVVEAVA 311
>gi|440749103|ref|ZP_20928352.1| hypothetical protein C943_0916 [Mariniradius saccharolyticus AK6]
gi|436482464|gb|ELP38579.1| hypothetical protein C943_0916 [Mariniradius saccharolyticus AK6]
Length = 83
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E IE+ LD IRPYL +DGGNV + ++ D V+RL+L GAC SCP S MT+K G+E +
Sbjct: 8 ERIETALDSIRPYLEADGGNVKIVDLTDDMVLRLELMGACSSCPMSTMTLKAGVEEAIKR 67
Query: 144 KIPEIVAVESV 154
IPEI VE+V
Sbjct: 68 AIPEITRVEAV 78
>gi|15923926|ref|NP_371460.1| hypothetical protein SAV0936 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926525|ref|NP_374058.1| hypothetical protein SA0797 [Staphylococcus aureus subsp. aureus
N315]
gi|21282547|ref|NP_645635.1| hypothetical protein MW0818 [Staphylococcus aureus subsp. aureus
MW2]
gi|49483096|ref|YP_040320.1| hypothetical protein SAR0898 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49485712|ref|YP_042933.1| hypothetical protein SAS0806 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82750551|ref|YP_416292.1| hypothetical protein SAB0802c [Staphylococcus aureus RF122]
gi|87159950|ref|YP_493539.1| hypothetical protein SAUSA300_0839 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194630|ref|YP_499426.1| hypothetical protein SAOUHSC_00873 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148267370|ref|YP_001246313.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
JH9]
gi|150393423|ref|YP_001316098.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
JH1]
gi|151221019|ref|YP_001331841.1| hypothetical protein NWMN_0807 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156979262|ref|YP_001441521.1| hypothetical protein SAHV_0931 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161509138|ref|YP_001574797.1| hypothetical protein USA300HOU_0897 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221141927|ref|ZP_03566420.1| hypothetical protein SauraJ_09890 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253316824|ref|ZP_04840037.1| hypothetical protein SauraC_11885 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253731543|ref|ZP_04865708.1| NifU family protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253732709|ref|ZP_04866874.1| NifU family protein [Staphylococcus aureus subsp. aureus TCH130]
gi|255005726|ref|ZP_05144327.2| hypothetical protein SauraM_04635 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257424985|ref|ZP_05601412.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427651|ref|ZP_05604050.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257430286|ref|ZP_05606669.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257432983|ref|ZP_05609343.1| nitrogen fixation protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435887|ref|ZP_05611935.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|257795329|ref|ZP_05644308.1| nitrogen fixation protein NifU [Staphylococcus aureus A9781]
gi|258406978|ref|ZP_05680131.1| nitrogen fixation protein NifU [Staphylococcus aureus A9763]
gi|258421946|ref|ZP_05684867.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|258424377|ref|ZP_05687257.1| nitrogen fixation protein [Staphylococcus aureus A9635]
gi|258435343|ref|ZP_05689082.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|258441555|ref|ZP_05690915.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus A8115]
gi|258447254|ref|ZP_05695403.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|258450014|ref|ZP_05698112.1| nitrogen fixation protein NifU [Staphylococcus aureus A6224]
gi|258452112|ref|ZP_05700128.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|258455527|ref|ZP_05703486.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|262049630|ref|ZP_06022498.1| hypothetical protein SAD30_1213 [Staphylococcus aureus D30]
gi|262052935|ref|ZP_06025116.1| hypothetical protein SA930_0147 [Staphylococcus aureus 930918-3]
gi|269202551|ref|YP_003281820.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
ED98]
gi|282893963|ref|ZP_06302194.1| thioredoxin [Staphylococcus aureus A8117]
gi|282903473|ref|ZP_06311364.1| NifU domain protein [Staphylococcus aureus subsp. aureus C160]
gi|282905251|ref|ZP_06313108.1| thioredoxin-family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908231|ref|ZP_06316062.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282910512|ref|ZP_06318316.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282913708|ref|ZP_06321497.1| NifU domain protein [Staphylococcus aureus subsp. aureus M899]
gi|282916186|ref|ZP_06323948.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus D139]
gi|282918634|ref|ZP_06326371.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C427]
gi|282922215|ref|ZP_06329910.1| thioredoxin-like protein [Staphylococcus aureus A9765]
gi|282923624|ref|ZP_06331304.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C101]
gi|282927159|ref|ZP_06334781.1| thioredoxin-like protein [Staphylococcus aureus A10102]
gi|283770001|ref|ZP_06342893.1| thioredoxin protein [Staphylococcus aureus subsp. aureus H19]
gi|283957674|ref|ZP_06375127.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284023863|ref|ZP_06378261.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
132]
gi|293500750|ref|ZP_06666601.1| thioredoxin protein [Staphylococcus aureus subsp. aureus 58-424]
gi|293509700|ref|ZP_06668411.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus M809]
gi|293524288|ref|ZP_06670975.1| NifU domain protein [Staphylococcus aureus subsp. aureus M1015]
gi|294850211|ref|ZP_06790947.1| thioredoxin-like protein [Staphylococcus aureus A9754]
gi|295405741|ref|ZP_06815550.1| thioredoxin-like protein [Staphylococcus aureus A8819]
gi|295427419|ref|ZP_06820054.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275869|ref|ZP_06858376.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
MR1]
gi|297208429|ref|ZP_06924859.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297245332|ref|ZP_06929203.1| hypothetical protein SLAG_01427 [Staphylococcus aureus A8796]
gi|297590221|ref|ZP_06948860.1| NifU domain protein [Staphylococcus aureus subsp. aureus MN8]
gi|300912505|ref|ZP_07129948.1| NifU domain protein [Staphylococcus aureus subsp. aureus TCH70]
gi|304381511|ref|ZP_07364161.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|379014132|ref|YP_005290368.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
VC40]
gi|379795313|ref|YP_005325311.1| NifU family protein [Staphylococcus aureus subsp. aureus MSHR1132]
gi|384547126|ref|YP_005736379.1| nitrogen fixation protein [Staphylococcus aureus subsp. aureus
ED133]
gi|384549700|ref|YP_005738952.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus JKD6159]
gi|384861535|ref|YP_005744255.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|384864166|ref|YP_005749525.1| nifU-like domain protein [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|384868197|ref|YP_005748393.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
TCH60]
gi|384869468|ref|YP_005752182.1| Nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus T0131]
gi|385781166|ref|YP_005757337.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
11819-97]
gi|386830479|ref|YP_006237133.1| hypothetical protein SAEMRSA15_07660 [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387142555|ref|YP_005730948.1| hypothetical protein SATW20_09360 [Staphylococcus aureus subsp.
aureus TW20]
gi|387150076|ref|YP_005741640.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus
04-02981]
gi|387602197|ref|YP_005733718.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
ST398]
gi|387780056|ref|YP_005754854.1| hypothetical protein SARLGA251_08540 [Staphylococcus aureus subsp.
aureus LGA251]
gi|404478247|ref|YP_006709677.1| hypothetical protein C248_0935 [Staphylococcus aureus 08BA02176]
gi|415683676|ref|ZP_11448892.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|415688006|ref|ZP_11451785.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|415692112|ref|ZP_11454178.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|416839551|ref|ZP_11902937.1| NifU domain-containing protein [Staphylococcus aureus O11]
gi|416844945|ref|ZP_11905581.1| NifU domain-containing protein [Staphylococcus aureus O46]
gi|417649853|ref|ZP_12299643.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21189]
gi|417650551|ref|ZP_12300319.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21172]
gi|417653125|ref|ZP_12302861.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21193]
gi|417795268|ref|ZP_12442492.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21305]
gi|417799484|ref|ZP_12446623.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21310]
gi|417800544|ref|ZP_12447660.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21318]
gi|417888472|ref|ZP_12532582.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21195]
gi|417892079|ref|ZP_12536136.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21200]
gi|417893082|ref|ZP_12537118.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21201]
gi|417895186|ref|ZP_12539187.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21235]
gi|417898807|ref|ZP_12542724.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21259]
gi|417901579|ref|ZP_12545455.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21266]
gi|417902948|ref|ZP_12546808.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21269]
gi|418278153|ref|ZP_12892280.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21178]
gi|418283210|ref|ZP_12895965.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21202]
gi|418285905|ref|ZP_12898568.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21209]
gi|418308275|ref|ZP_12919911.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21194]
gi|418311305|ref|ZP_12922831.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21331]
gi|418312440|ref|ZP_12923949.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21334]
gi|418318050|ref|ZP_12929465.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21232]
gi|418321536|ref|ZP_12932876.1| NifU-like protein [Staphylococcus aureus subsp. aureus VCU006]
gi|418424076|ref|ZP_12997203.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS1]
gi|418426964|ref|ZP_12999982.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS2]
gi|418429911|ref|ZP_13002832.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS3a]
gi|418432877|ref|ZP_13005660.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS4]
gi|418436540|ref|ZP_13008346.1| hypothetical protein MQI_02396 [Staphylococcus aureus subsp. aureus
VRS5]
gi|418439417|ref|ZP_13011127.1| hypothetical protein MQK_00272 [Staphylococcus aureus subsp. aureus
VRS6]
gi|418442464|ref|ZP_13014068.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS7]
gi|418448475|ref|ZP_13019870.1| hypothetical protein MQQ_00482 [Staphylococcus aureus subsp. aureus
VRS9]
gi|418451282|ref|ZP_13022619.1| hypothetical protein MQS_01325 [Staphylococcus aureus subsp. aureus
VRS10]
gi|418454357|ref|ZP_13025622.1| hypothetical protein MQU_01203 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457233|ref|ZP_13028439.1| hypothetical protein MQW_01483 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418560859|ref|ZP_13125365.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21252]
gi|418561670|ref|ZP_13126152.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21262]
gi|418565686|ref|ZP_13130081.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21264]
gi|418569198|ref|ZP_13133535.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21272]
gi|418571797|ref|ZP_13136019.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21283]
gi|418574131|ref|ZP_13138308.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21333]
gi|418578767|ref|ZP_13142862.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418581566|ref|ZP_13145646.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418596131|ref|ZP_13159709.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21342]
gi|418598210|ref|ZP_13161721.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21343]
gi|418601813|ref|ZP_13165229.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21345]
gi|418639651|ref|ZP_13201892.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-3]
gi|418642543|ref|ZP_13204729.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-24]
gi|418643637|ref|ZP_13205799.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-55]
gi|418647876|ref|ZP_13209933.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-88]
gi|418649442|ref|ZP_13211470.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-91]
gi|418653985|ref|ZP_13215907.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-99]
gi|418657694|ref|ZP_13219456.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-105]
gi|418659104|ref|ZP_13220796.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-111]
gi|418662393|ref|ZP_13223944.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-122]
gi|418872229|ref|ZP_13426574.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-125]
gi|418874863|ref|ZP_13429128.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC93]
gi|418877778|ref|ZP_13432014.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418880614|ref|ZP_13434833.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418883541|ref|ZP_13437738.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418886196|ref|ZP_13440346.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1150]
gi|418888736|ref|ZP_13442872.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1524]
gi|418891482|ref|ZP_13445599.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1176]
gi|418894391|ref|ZP_13448489.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418897257|ref|ZP_13451330.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418901650|ref|ZP_13455699.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418903142|ref|ZP_13457183.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418905872|ref|ZP_13459899.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418908633|ref|ZP_13462641.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG149]
gi|418911544|ref|ZP_13465527.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG547]
gi|418914031|ref|ZP_13468003.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418916720|ref|ZP_13470680.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1267]
gi|418919785|ref|ZP_13473726.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC348]
gi|418922508|ref|ZP_13476425.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418925105|ref|ZP_13479008.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418928190|ref|ZP_13482076.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1612]
gi|418930923|ref|ZP_13484770.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1750]
gi|418933773|ref|ZP_13487597.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418947745|ref|ZP_13500089.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-157]
gi|418952668|ref|ZP_13504684.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-189]
gi|418981758|ref|ZP_13529472.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418983812|ref|ZP_13531510.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1500]
gi|418987760|ref|ZP_13535433.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1835]
gi|418990799|ref|ZP_13538460.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1096]
gi|418993553|ref|ZP_13541190.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG290]
gi|419775762|ref|ZP_14301691.1| NifU-like protein [Staphylococcus aureus subsp. aureus CO-23]
gi|419785871|ref|ZP_14311616.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-M]
gi|421149615|ref|ZP_15609273.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|422743674|ref|ZP_16797658.1| NifU-like domain protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|422745832|ref|ZP_16799771.1| NifU-like domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|424767243|ref|ZP_18194572.1| NifU-like protein [Staphylococcus aureus subsp. aureus CM05]
gi|424784761|ref|ZP_18211564.1| NifU-like domain protein [Staphylococcus aureus CN79]
gi|440708465|ref|ZP_20889129.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21282]
gi|440734388|ref|ZP_20914000.1| hypothetical protein SASA_03980 [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|443636350|ref|ZP_21120464.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21236]
gi|443640075|ref|ZP_21124073.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21196]
gi|448741342|ref|ZP_21723308.1| NifU-like protein [Staphylococcus aureus KT/314250]
gi|448744837|ref|ZP_21726717.1| NifU-like protein [Staphylococcus aureus KT/Y21]
gi|13700740|dbj|BAB42036.1| SA0797 [Staphylococcus aureus subsp. aureus N315]
gi|14246705|dbj|BAB57098.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
Mu50]
gi|21203984|dbj|BAB94683.1| MW0818 [Staphylococcus aureus subsp. aureus MW2]
gi|49241225|emb|CAG39904.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49244155|emb|CAG42581.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82656082|emb|CAI80490.1| nitrogen fixation protein [Staphylococcus aureus RF122]
gi|87125924|gb|ABD20438.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202188|gb|ABD29998.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147740439|gb|ABQ48737.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus JH9]
gi|149945875|gb|ABR51811.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus JH1]
gi|150373819|dbj|BAF67079.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|156721397|dbj|BAF77814.1| hypothetical protein SAHV_0931 [Staphylococcus aureus subsp. aureus
Mu3]
gi|160367947|gb|ABX28918.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724786|gb|EES93515.1| NifU family protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253729320|gb|EES98049.1| NifU family protein [Staphylococcus aureus subsp. aureus TCH130]
gi|257272555|gb|EEV04678.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275844|gb|EEV07317.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus 65-1322]
gi|257279063|gb|EEV09674.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257282398|gb|EEV12533.1| nitrogen fixation protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257285078|gb|EEV15197.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|257789301|gb|EEV27641.1| nitrogen fixation protein NifU [Staphylococcus aureus A9781]
gi|257841517|gb|EEV65958.1| nitrogen fixation protein NifU [Staphylococcus aureus A9763]
gi|257842279|gb|EEV66707.1| conserved hypothetical protein [Staphylococcus aureus A9719]
gi|257845390|gb|EEV69424.1| nitrogen fixation protein [Staphylococcus aureus A9635]
gi|257849004|gb|EEV72987.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257852345|gb|EEV76271.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus A8115]
gi|257854002|gb|EEV76956.1| conserved hypothetical protein [Staphylococcus aureus A6300]
gi|257856934|gb|EEV79837.1| nitrogen fixation protein NifU [Staphylococcus aureus A6224]
gi|257860327|gb|EEV83159.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|257862345|gb|EEV85114.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|259159186|gb|EEW44249.1| hypothetical protein SA930_0147 [Staphylococcus aureus 930918-3]
gi|259162272|gb|EEW46846.1| hypothetical protein SAD30_1213 [Staphylococcus aureus D30]
gi|262074841|gb|ACY10814.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
ED98]
gi|269940438|emb|CBI48815.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282314492|gb|EFB44882.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C101]
gi|282317768|gb|EFB48140.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus C427]
gi|282319626|gb|EFB49974.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus D139]
gi|282322740|gb|EFB53062.1| NifU domain protein [Staphylococcus aureus subsp. aureus M899]
gi|282325904|gb|EFB56212.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282327896|gb|EFB58178.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282331658|gb|EFB61170.1| thioredoxin-family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282590848|gb|EFB95923.1| thioredoxin-like protein [Staphylococcus aureus A10102]
gi|282593505|gb|EFB98499.1| thioredoxin-like protein [Staphylococcus aureus A9765]
gi|282596428|gb|EFC01389.1| NifU domain protein [Staphylococcus aureus subsp. aureus C160]
gi|282763449|gb|EFC03578.1| thioredoxin [Staphylococcus aureus A8117]
gi|283460148|gb|EFC07238.1| thioredoxin protein [Staphylococcus aureus subsp. aureus H19]
gi|283470135|emb|CAQ49346.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
ST398]
gi|283791125|gb|EFC29940.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285816615|gb|ADC37102.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus
04-02981]
gi|290921251|gb|EFD98312.1| NifU domain protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095755|gb|EFE26016.1| thioredoxin protein [Staphylococcus aureus subsp. aureus 58-424]
gi|291467797|gb|EFF10312.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
aureus subsp. aureus M809]
gi|294822985|gb|EFG39418.1| thioredoxin-like protein [Staphylococcus aureus A9754]
gi|294969176|gb|EFG45196.1| thioredoxin-like protein [Staphylococcus aureus A8819]
gi|295128807|gb|EFG58438.1| thioredoxin-like protein [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296887168|gb|EFH26071.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297177635|gb|EFH36885.1| hypothetical protein SLAG_01427 [Staphylococcus aureus A8796]
gi|297576520|gb|EFH95235.1| NifU domain protein [Staphylococcus aureus subsp. aureus MN8]
gi|298694175|gb|ADI97397.1| nitrogen fixation protein [Staphylococcus aureus subsp. aureus
ED133]
gi|300886751|gb|EFK81953.1| NifU domain protein [Staphylococcus aureus subsp. aureus TCH70]
gi|302332549|gb|ADL22742.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302750764|gb|ADL64941.1| nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304339874|gb|EFM05818.1| NifU domain protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312438702|gb|ADQ77773.1| NifU domain protein [Staphylococcus aureus subsp. aureus TCH60]
gi|312829333|emb|CBX34175.1| nifU-like domain protein [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315130484|gb|EFT86471.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194468|gb|EFU24860.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS00]
gi|315197289|gb|EFU27627.1| possible NifU family protein [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141247|gb|EFW33094.1| NifU-like domain protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143019|gb|EFW34810.1| NifU-like domain protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323440910|gb|EGA98618.1| NifU domain-containing protein [Staphylococcus aureus O11]
gi|323443798|gb|EGB01410.1| NifU domain-containing protein [Staphylococcus aureus O46]
gi|329313603|gb|AEB88016.1| Nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus T0131]
gi|329726251|gb|EGG62721.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21189]
gi|329728166|gb|EGG64605.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21172]
gi|329733972|gb|EGG70294.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21193]
gi|334271782|gb|EGL90163.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21305]
gi|334273591|gb|EGL91933.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21310]
gi|334277878|gb|EGL96094.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21318]
gi|341841938|gb|EGS83376.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21235]
gi|341845418|gb|EGS86620.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21266]
gi|341847766|gb|EGS88940.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21259]
gi|341850481|gb|EGS91600.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21269]
gi|341851365|gb|EGS92294.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21200]
gi|341855172|gb|EGS96024.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21195]
gi|341856184|gb|EGS97026.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21201]
gi|344177158|emb|CCC87622.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|356872303|emb|CCE58642.1| NifU family protein [Staphylococcus aureus subsp. aureus MSHR1132]
gi|364522155|gb|AEW64905.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
11819-97]
gi|365168171|gb|EHM59527.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21202]
gi|365168797|gb|EHM60133.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21209]
gi|365172679|gb|EHM63351.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21178]
gi|365224794|gb|EHM66055.1| NifU-like protein [Staphylococcus aureus subsp. aureus VCU006]
gi|365234716|gb|EHM75644.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21331]
gi|365238085|gb|EHM78922.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21334]
gi|365240308|gb|EHM81089.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21194]
gi|365244742|gb|EHM85399.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21232]
gi|371970873|gb|EHO88288.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21252]
gi|371972597|gb|EHO89971.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21264]
gi|371976868|gb|EHO94154.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21262]
gi|371977855|gb|EHO95114.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21272]
gi|371978649|gb|EHO95891.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21283]
gi|371980228|gb|EHO97442.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21333]
gi|374362829|gb|AEZ36934.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
VC40]
gi|374397624|gb|EHQ68833.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21345]
gi|374399040|gb|EHQ70190.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21342]
gi|374399912|gb|EHQ71044.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21343]
gi|375015656|gb|EHS09300.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-24]
gi|375016663|gb|EHS10298.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-3]
gi|375017551|gb|EHS11164.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-99]
gi|375028334|gb|EHS21680.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-88]
gi|375028412|gb|EHS21757.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-55]
gi|375029524|gb|EHS22850.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-105]
gi|375029815|gb|EHS23140.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-91]
gi|375036517|gb|EHS29585.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-122]
gi|375036615|gb|EHS29681.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-111]
gi|375367417|gb|EHS71379.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-125]
gi|375374475|gb|EHS78103.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-157]
gi|375376382|gb|EHS79917.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-189]
gi|377695392|gb|EHT19753.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377695744|gb|EHT20101.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377696794|gb|EHT21149.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377700600|gb|EHT24936.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377706357|gb|EHT30654.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377710246|gb|EHT34487.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377711116|gb|EHT35349.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377715275|gb|EHT39465.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377715760|gb|EHT39946.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377719548|gb|EHT43718.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377722921|gb|EHT47046.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377724922|gb|EHT49037.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG547]
gi|377727494|gb|EHT51601.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377731507|gb|EHT55560.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1213]
gi|377732439|gb|EHT56490.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377735831|gb|EHT59861.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377738102|gb|EHT62111.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377742157|gb|EHT66142.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377746400|gb|EHT70371.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377746712|gb|EHT70682.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG290]
gi|377750872|gb|EHT74808.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1267]
gi|377754246|gb|EHT78155.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG1524]
gi|377755972|gb|EHT79870.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIG149]
gi|377757533|gb|EHT81421.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377762036|gb|EHT85905.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|377765172|gb|EHT89022.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377767001|gb|EHT90822.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC348]
gi|377771206|gb|EHT94961.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC93]
gi|377771553|gb|EHT95307.1| nitrogen fixation protein NifU [Staphylococcus aureus subsp. aureus
CIGC128]
gi|383361912|gb|EID39275.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-M]
gi|383970368|gb|EID86471.1| NifU-like protein [Staphylococcus aureus subsp. aureus CO-23]
gi|385195871|emb|CCG15482.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|387719725|gb|EIK07659.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS3a]
gi|387719900|gb|EIK07827.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS2]
gi|387721128|gb|EIK09012.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS1]
gi|387726113|gb|EIK13695.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS4]
gi|387728656|gb|EIK16139.1| hypothetical protein MQI_02396 [Staphylococcus aureus subsp. aureus
VRS5]
gi|387730904|gb|EIK18244.1| hypothetical protein MQK_00272 [Staphylococcus aureus subsp. aureus
VRS6]
gi|387738056|gb|EIK25109.1| putative nitrogen fixation protein yutI [Staphylococcus aureus
subsp. aureus VRS7]
gi|387738434|gb|EIK25472.1| hypothetical protein MQQ_00482 [Staphylococcus aureus subsp. aureus
VRS9]
gi|387745543|gb|EIK32294.1| hypothetical protein MQS_01325 [Staphylococcus aureus subsp. aureus
VRS10]
gi|387746436|gb|EIK33167.1| hypothetical protein MQU_01203 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387748076|gb|EIK34771.1| hypothetical protein MQW_01483 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|394330532|gb|EJE56624.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|402349189|gb|EJU84151.1| NifU-like protein [Staphylococcus aureus subsp. aureus CM05]
gi|404439736|gb|AFR72929.1| hypothetical protein C248_0935 [Staphylococcus aureus 08BA02176]
gi|421956171|gb|EKU08500.1| NifU-like domain protein [Staphylococcus aureus CN79]
gi|436431416|gb|ELP28769.1| hypothetical protein SASA_03980 [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436504803|gb|ELP40772.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21282]
gi|443405951|gb|ELS64540.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21196]
gi|443407873|gb|ELS66405.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21236]
gi|445547917|gb|ELY16177.1| NifU-like protein [Staphylococcus aureus KT/314250]
gi|445561806|gb|ELY17994.1| NifU-like protein [Staphylococcus aureus KT/Y21]
Length = 80
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 53/70 (75%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + V++ +RP+L+ DGG+ +L +++ +V+L+L GACG+CPSS +T+K GIER L E+
Sbjct: 10 DQVAEVIERLRPFLLRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEE 69
Query: 145 IPEIVAVESV 154
+P ++ VE V
Sbjct: 70 VPGVIEVEQV 79
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ + +V+E +RP+L+ GG L+ +++ IVK+++ G + +T++ + + L E
Sbjct: 10 DQVAEVIERLRPFLL-RDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHE 68
Query: 222 KIPAIAAVQ 230
++P + V+
Sbjct: 69 EVPGVIEVE 77
>gi|326798778|ref|YP_004316597.1| nitrogen-fixing NifU domain-containing protein [Sphingobacterium
sp. 21]
gi|326549542|gb|ADZ77927.1| nitrogen-fixing NifU domain-containing protein [Sphingobacterium
sp. 21]
Length = 92
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E L+ +RPYL +DGGNV + EI NVVRL+L G+C SC S+MT K G+E+ + +
Sbjct: 5 ERVEEALNTLRPYLEADGGNVTIEEITSENVVRLRLLGSCASCSMSIMTFKAGLEQAIQK 64
Query: 144 KIPEIVAVESV 154
+PEI AVE++
Sbjct: 65 AVPEITAVEAI 75
>gi|379020635|ref|YP_005297297.1| Nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus M013]
gi|418952071|ref|ZP_13504119.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-160]
gi|359829944|gb|AEV77922.1| Nitrogen-fixing NifU domain protein [Staphylococcus aureus subsp.
aureus M013]
gi|375369983|gb|EHS73826.1| NifU-like protein [Staphylococcus aureus subsp. aureus IS-160]
Length = 80
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 53/70 (75%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + V++ +RP+L+ DGG+ +L +++ +V+L+L GACG+CPSS +T+K GIER L E+
Sbjct: 10 DQVAEVIERLRPFLLRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEE 69
Query: 145 IPEIVAVESV 154
+P ++ VE V
Sbjct: 70 VPGVIEVEQV 79
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ + +V+E +RP+L+ GG L+ +++ IVK+++ G + +T++ + + L E
Sbjct: 10 DQVAEVIERLRPFLL-RDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHE 68
Query: 222 KIPAIAAVQ 230
++P + V+
Sbjct: 69 EVPGVIEVE 77
>gi|358053201|ref|ZP_09146977.1| nitrogen-fixing NifU domain protein [Staphylococcus simiae CCM
7213]
gi|404416815|ref|ZP_10998629.1| hypothetical protein SARL_03061 [Staphylococcus arlettae CVD059]
gi|357257326|gb|EHJ07607.1| nitrogen-fixing NifU domain protein [Staphylococcus simiae CCM
7213]
gi|403490823|gb|EJY96354.1| hypothetical protein SARL_03061 [Staphylococcus arlettae CVD059]
Length = 80
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 53/70 (75%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + V++ +RP+L+ DGG+ +L +++ +V+L+L GACG+CPSS +T+K GIER L E+
Sbjct: 10 DQVAEVIERLRPFLLRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEE 69
Query: 145 IPEIVAVESV 154
+P ++ VE V
Sbjct: 70 VPGVIEVEQV 79
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ + +V+E +RP+L+ GG L+ +++ IVK+++ G + +T++ + + L E
Sbjct: 10 DQVAEVIERLRPFLL-RDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHE 68
Query: 222 KIPAIAAVQ 230
++P + V+
Sbjct: 69 EVPGVIEVE 77
>gi|157870953|ref|XP_001684026.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127094|emb|CAJ04535.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 240
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP L +DGGNV ++D V L L+G+C SCPSS +T+K GIER LM IPE+V +
Sbjct: 152 IRPMLRADGGNVRFIDMDEGTVFLLLEGSCKSCPSSHITLKSGIERMLMHWIPEVVEAQE 211
Query: 154 VADEETGLELNEENIEKVLEE 174
V+DE L+E+ + K L+E
Sbjct: 212 VSDEVAADILSEKQLRKQLKE 232
>gi|418445527|ref|ZP_13017007.1| hypothetical protein MQO_00553 [Staphylococcus aureus subsp. aureus
VRS8]
gi|387736513|gb|EIK23602.1| hypothetical protein MQO_00553 [Staphylococcus aureus subsp. aureus
VRS8]
Length = 80
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 52/70 (74%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + V++ +RP+L DGG+ +L +++ +V+L+L GACG+CPSS +T+K GIER L E+
Sbjct: 10 DQVAEVIERLRPFLFRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEE 69
Query: 145 IPEIVAVESV 154
+P ++ VE V
Sbjct: 70 VPGVIEVEQV 79
Score = 36.6 bits (83), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ + +V+E +RP+L GG L+ +++ IVK+++ G + +T++ + + L E
Sbjct: 10 DQVAEVIERLRPFLF-RDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHE 68
Query: 222 KIPAIAAVQ 230
++P + V+
Sbjct: 69 EVPGVIEVE 77
>gi|386728614|ref|YP_006194997.1| nifU-like protein [Staphylococcus aureus subsp. aureus 71193]
gi|418978823|ref|ZP_13526623.1| NifU-like protein [Staphylococcus aureus subsp. aureus DR10]
gi|379993647|gb|EIA15093.1| NifU-like protein [Staphylococcus aureus subsp. aureus DR10]
gi|384229907|gb|AFH69154.1| NifU-like protein [Staphylococcus aureus subsp. aureus 71193]
Length = 107
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 53/70 (75%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + V++ +RP+L+ DGG+ +L +++ +V+L+L GACG+CPSS +T+K GIER L E+
Sbjct: 37 DQVAEVIERLRPFLLRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEE 96
Query: 145 IPEIVAVESV 154
+P ++ VE V
Sbjct: 97 VPGVIEVEQV 106
>gi|57651628|ref|YP_185809.1| NifU domain-containing protein [Staphylococcus aureus subsp. aureus
COL]
gi|57285814|gb|AAW37908.1| NifU domain protein [Staphylococcus aureus subsp. aureus COL]
Length = 73
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 53/70 (75%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + V++ +RP+L+ DGG+ +L +++ +V+L+L GACG+CPSS +T+K GIER L E+
Sbjct: 3 DQVAEVIERLRPFLLRDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEE 62
Query: 145 IPEIVAVESV 154
+P ++ VE V
Sbjct: 63 VPGVIEVEQV 72
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ + +V+E +RP+L+ GG L+ +++ IVK+++ G + +T++ + + L E
Sbjct: 3 DQVAEVIERLRPFLL-RDGGDCSLIDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHE 61
Query: 222 KIPAIAAVQ 230
++P + V+
Sbjct: 62 EVPGVIEVE 70
>gi|70727016|ref|YP_253930.1| nitrogen fixation protein NifU [Staphylococcus haemolyticus
JCSC1435]
gi|223043066|ref|ZP_03613114.1| nitrogen fixation protein NifU [Staphylococcus capitis SK14]
gi|228474235|ref|ZP_04058970.1| nitrogen fixation protein NifU [Staphylococcus hominis SK119]
gi|239636541|ref|ZP_04677543.1| nitrogen fixation protein NifU [Staphylococcus warneri L37603]
gi|242373103|ref|ZP_04818677.1| nitrogen fixation protein NifU [Staphylococcus epidermidis
M23864:W1]
gi|289551248|ref|YP_003472152.1| nitrogen-fixing NifU domain protein [Staphylococcus lugdunensis
HKU09-01]
gi|314933148|ref|ZP_07840513.1| NifU domain protein [Staphylococcus caprae C87]
gi|314936844|ref|ZP_07844191.1| NifU domain protein [Staphylococcus hominis subsp. hominis C80]
gi|315658750|ref|ZP_07911619.1| NifU domain protein [Staphylococcus lugdunensis M23590]
gi|385784864|ref|YP_005761037.1| hypothetical protein SLUG_19290 [Staphylococcus lugdunensis
N920143]
gi|417644323|ref|ZP_12294324.1| NifU-like protein [Staphylococcus warneri VCU121]
gi|417907504|ref|ZP_12551276.1| NifU-like protein [Staphylococcus capitis VCU116]
gi|418414543|ref|ZP_12987758.1| hypothetical protein HMPREF9308_00923 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|418619382|ref|ZP_13182210.1| NifU-like protein [Staphylococcus hominis VCU122]
gi|418636078|ref|ZP_13198432.1| NifU-like protein [Staphylococcus lugdunensis VCU139]
gi|445060165|ref|YP_007385569.1| hypothetical protein A284_09050 [Staphylococcus warneri SG1]
gi|68447740|dbj|BAE05324.1| nitrogen fixation protein NifU [Staphylococcus haemolyticus
JCSC1435]
gi|222443920|gb|EEE50017.1| nitrogen fixation protein NifU [Staphylococcus capitis SK14]
gi|228271594|gb|EEK12941.1| nitrogen fixation protein NifU [Staphylococcus hominis SK119]
gi|239597896|gb|EEQ80391.1| nitrogen fixation protein NifU [Staphylococcus warneri L37603]
gi|242349257|gb|EES40858.1| nitrogen fixation protein NifU [Staphylococcus epidermidis
M23864:W1]
gi|289180780|gb|ADC88025.1| nitrogen-fixing NifU domain protein [Staphylococcus lugdunensis
HKU09-01]
gi|313653298|gb|EFS17055.1| NifU domain protein [Staphylococcus caprae C87]
gi|313655463|gb|EFS19208.1| NifU domain protein [Staphylococcus hominis subsp. hominis C80]
gi|315496205|gb|EFU84531.1| NifU domain protein [Staphylococcus lugdunensis M23590]
gi|330684919|gb|EGG96601.1| NifU-like protein [Staphylococcus epidermidis VCU121]
gi|339895120|emb|CCB54437.1| conserved hypothetical protein [Staphylococcus lugdunensis N920143]
gi|341596090|gb|EGS38721.1| NifU-like protein [Staphylococcus capitis VCU116]
gi|374824428|gb|EHR88386.1| NifU-like protein [Staphylococcus hominis VCU122]
gi|374841237|gb|EHS04714.1| NifU-like protein [Staphylococcus lugdunensis VCU139]
gi|410877150|gb|EKS25047.1| hypothetical protein HMPREF9308_00923 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|443426222|gb|AGC91125.1| hypothetical protein A284_09050 [Staphylococcus warneri SG1]
Length = 80
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 52/70 (74%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + V++ +RP+L+ DGG+ L +++ +V+L+L GACG+CPSS +T+K GIER L E+
Sbjct: 10 DQVAEVIERLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEE 69
Query: 145 IPEIVAVESV 154
+P ++ VE V
Sbjct: 70 VPGVIEVEQV 79
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ + +V+E +RP+L+ GG LV +++ IVK+++ G + +T++ + + L E
Sbjct: 10 DQVAEVIERLRPFLL-RDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHE 68
Query: 222 KIPAIAAVQ 230
++P + V+
Sbjct: 69 EVPGVIEVE 77
>gi|124009117|ref|ZP_01693800.1| conserved domain protein [Microscilla marina ATCC 23134]
gi|123985331|gb|EAY25251.1| conserved domain protein [Microscilla marina ATCC 23134]
Length = 84
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 58/81 (71%), Gaps = 4/81 (4%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTM 133
D+ I++ E +++ LD IRPYL +DGG+V + E+ + VV+L+L G+CGSCP S MT+
Sbjct: 2 DTTIDM---IERVDNALDTIRPYLKTDGGDVKVLEVSEDGVVKLELMGSCGSCPMSAMTL 58
Query: 134 KMGIERRLMEKIPEIVAVESV 154
K GIE + + +PEI AVE++
Sbjct: 59 KAGIEESIRKAVPEITAVEAI 79
>gi|282875569|ref|ZP_06284440.1| NifU-like protein [Staphylococcus epidermidis SK135]
gi|281295596|gb|EFA88119.1| NifU-like protein [Staphylococcus epidermidis SK135]
Length = 80
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 52/70 (74%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + V++ +RP+L+ DGG+ L +++ +V+L+L GACG+CPSS +T+K GIER L E+
Sbjct: 10 DQVAEVIERLRPFLLRDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEE 69
Query: 145 IPEIVAVESV 154
+P ++ VE V
Sbjct: 70 VPGVIEVEQV 79
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ + +V+E +RP+L+ GG LV +++ IVK+++ G + +T++ + + L E
Sbjct: 10 DQVAEVIERLRPFLL-RDGGDCTLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHE 68
Query: 222 KIPAIAAVQ 230
++P + V+
Sbjct: 69 EVPGVIEVE 77
>gi|441501101|ref|ZP_20983232.1| hypothetical protein C900_00264 [Fulvivirga imtechensis AK7]
gi|441435110|gb|ELR68523.1| hypothetical protein C900_00264 [Fulvivirga imtechensis AK7]
Length = 101
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I++ LD IRPYL +DGG+V + EI D VV+L+L GACGSCP S MT+K G+E + +
Sbjct: 14 QKIDAALDNIRPYLRTDGGDVKILEITDDMVVKLELMGACGSCPMSTMTLKAGVEEAIRK 73
Query: 144 KIPEIVAVESV 154
+P+I +VE++
Sbjct: 74 SVPQIKSVEAI 84
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKLR 220
+ I+ L+ IRPYL GG ++++ I D+ +VK+ + G MT++ V + +R
Sbjct: 14 QKIDAALDNIRPYL-RTDGGDVKILEITDDMVVKLELMGACGSCPMSTMTLKAGVEEAIR 72
Query: 221 EKIPAIAAVQ 230
+ +P I +V+
Sbjct: 73 KSVPQIKSVE 82
>gi|312384995|gb|EFR29592.1| hypothetical protein AND_01304 [Anopheles darlingi]
Length = 214
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 83 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
T + I+ +LD IRP + DGG++ D VV+LK+QG+C SCPSS++T+K G++ L
Sbjct: 112 TVQMIKELLDTRIRPTVQEDGGDIIFMGFDDGVVKLKMQGSCSSCPSSIVTLKNGVQNML 171
Query: 142 MEKIPEIVAVESVADEETGLELNEENIEKVLEEIR 176
IPE+V+VE V DE ++ E K+ ++IR
Sbjct: 172 QFYIPEVVSVEQVTDEVD--KMAETEFSKLEKQIR 204
>gi|325954760|ref|YP_004238420.1| nitrogen-fixing NifU domain-containing protein [Weeksella virosa
DSM 16922]
gi|323437378|gb|ADX67842.1| nitrogen-fixing NifU domain-containing protein [Weeksella virosa
DSM 16922]
Length = 93
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 54/78 (69%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+N+ LDEIRP+L SDGG++ L E+ NVV+++L+GAC SC + MT+K G+E + +
Sbjct: 7 DNVHKALDEIRPFLNSDGGDIELVEVKDNVVKVRLKGACTSCSVNQMTLKAGVETTVKKF 66
Query: 145 IPEIVAVESVADEETGLE 162
+PEI+ V V+ +E E
Sbjct: 67 VPEIIKVIDVSSQENAGE 84
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLRE 221
+N+ K L+EIRP+L + GG +ELV + + +VKVR+ G + MT++ V +++
Sbjct: 7 DNVHKALDEIRPFL-NSDGGDIELVEVKDNVVKVRLKGACTSCSVNQMTLKAGVETTVKK 65
Query: 222 KIPAIAAV 229
+P I V
Sbjct: 66 FVPEIIKV 73
>gi|418315960|ref|ZP_12927409.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21340]
gi|365242187|gb|EHM82907.1| NifU-like protein [Staphylococcus aureus subsp. aureus 21340]
Length = 80
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 52/70 (74%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + V++ +RP+L+ DGG+ + +++ +V+L+L GACG+CPSS +T+K GIER L E+
Sbjct: 10 DQVAEVIERLRPFLLRDGGDCSFIDVEDGIVKLQLHGACGTCPSSTITLKAGIERALHEE 69
Query: 145 IPEIVAVESV 154
+P ++ VE V
Sbjct: 70 VPGVIEVEQV 79
>gi|75910444|ref|YP_324740.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
gi|1236928|gb|AAA93019.1| NifU2 [Anabaena variabilis ATCC 29413]
gi|75704169|gb|ABA23845.1| Fe-S cluster assembly protein NifU [Anabaena variabilis ATCC 29413]
Length = 309
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG++ L+++ G+ V++ LQGACGSCPSS T+K+ +E +L E++
Sbjct: 231 IQKVLDEEVRPLLIADGGDIELYDVQGDNVQVVLQGACGSCPSSTATLKVAVEAKLQERV 290
Query: 146 PEIVAVESV 154
+ + VE+V
Sbjct: 291 SQSLRVEAV 299
>gi|222054851|ref|YP_002537213.1| nitrogen-fixing NifU domain-containing protein [Geobacter daltonii
FRC-32]
gi|221564140|gb|ACM20112.1| nitrogen-fixing NifU domain protein [Geobacter daltonii FRC-32]
Length = 73
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E+++ VLD IRP L +DGG+V L E+ + VV++KL GACG CP S MT+KMGIER L E
Sbjct: 3 EDVKKVLDTIRPNLQADGGDVELVEVGEDGVVKVKLVGACGHCPMSTMTLKMGIERTLKE 62
Query: 144 KIPEIVAVESV 154
K+P + V SV
Sbjct: 63 KVPGVKEVISV 73
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAA----GVMTVRVAVTQKLR 220
E+++KVL+ IRP L A GG +ELV + E +VKV++ G MT+++ + + L+
Sbjct: 3 EDVKKVLDTIRPNL-QADGGDVELVEVGEDGVVKVKLVGACGHCPMSTMTLKMGIERTLK 61
Query: 221 EKIPAIAAV 229
EK+P + V
Sbjct: 62 EKVPGVKEV 70
>gi|406836083|ref|ZP_11095677.1| nitrogen-fixing NifU domain-containing protein [Schlesneria
paludicola DSM 18645]
Length = 290
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%)
Query: 91 LDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVA 150
L+++RPYL S GGNV L EID +VRL+LQG+C CPSS MT+KM IE + E P+++
Sbjct: 97 LEQVRPYLKSHGGNVELLEIDEGLVRLQLQGSCHGCPSSAMTLKMAIEEAISEHAPDVLG 156
Query: 151 VE 152
+E
Sbjct: 157 LE 158
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 168 IEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAG----VMTVRVAVTQKLREKI 223
+ + LE++RPYL + GG++EL+ IDE +V++++ G G MT+++A+ + + E
Sbjct: 93 VGRALEQVRPYL-KSHGGNVELLEIDEGLVRLQLQGSCHGCPSSAMTLKMAIEEAISEHA 151
Query: 224 PAIAAVQL 231
P + +++
Sbjct: 152 PDVLGLEV 159
>gi|282901488|ref|ZP_06309413.1| Fe-S cluster assembly protein NifU [Cylindrospermopsis raciborskii
CS-505]
gi|281193767|gb|EFA68739.1| Fe-S cluster assembly protein NifU [Cylindrospermopsis raciborskii
CS-505]
Length = 308
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L++I+GN V++ L+GACGSC SS T+K+ IE RL E++
Sbjct: 240 IQKVLDEEVRPVLIADGGDVELYDIEGNKVKVILKGACGSCSSSTATLKIAIESRLRERV 299
Query: 146 PEIVAVESV 154
+ + VE+V
Sbjct: 300 NKEIIVEAV 308
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 168 IEKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREK 222
I+KVL EE+RP L+ A GG +EL I+ VKV + G ++ T+++A+ +LRE+
Sbjct: 240 IQKVLDEEVRPVLI-ADGGDVELYDIEGNKVKVILKGACGSCSSSTATLKIAIESRLRER 298
Query: 223 I 223
+
Sbjct: 299 V 299
>gi|428209492|ref|YP_007093845.1| Modular FeS cluster scaffolding protein NifU [Chroococcidiopsis
thermalis PCC 7203]
gi|428011413|gb|AFY89976.1| Modular FeS cluster scaffolding protein NifU [Chroococcidiopsis
thermalis PCC 7203]
Length = 295
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L+++DG+ V++ LQGACGSC SS T+K+ IE +L E++
Sbjct: 227 IQKVLDEEVRPLLIADGGDVELYDVDGDRVQVLLQGACGSCSSSTATLKVAIEAKLQERV 286
Query: 146 PEIVAVESV 154
+ + VE+V
Sbjct: 287 NQNLLVEAV 295
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENI---EKVL- 172
+K G CGSC + + + ++R + + + + ++ N + I +KVL
Sbjct: 173 VKAGGGCGSCLADIDDLIAAVQREPVVGVQVATGIAATKEQPQRPLTNVQKIALIQKVLD 232
Query: 173 EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREKI 223
EE+RP L+ A GG +EL +D V+V + G ++ T++VA+ KL+E++
Sbjct: 233 EEVRPLLI-ADGGDVELYDVDGDRVQVLLQGACGSCSSSTATLKVAIEAKLQERV 286
>gi|409097879|ref|ZP_11217903.1| nitrogen-fixing NifU domain-containing protein [Pedobacter agri
PB92]
Length = 81
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E L+ IRPYL +DGG+V++ EI V+LKL G CGSCP S MTMK GIE+ +M+
Sbjct: 5 EQVEQALETIRPYLKADGGDVSVEEITSEGTVKLKLLGNCGSCPMSFMTMKSGIEQAIMK 64
Query: 144 KIPEIVAVESV 154
+P I +V +V
Sbjct: 65 AVPSITSVVAV 75
>gi|403068019|ref|ZP_10909351.1| nitrogen fixation protein [Oceanobacillus sp. Ndiop]
Length = 74
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ VL+++RP+L+ DGG+V L ++D + VV L+L GACG+CPSS +T+K GIER LM
Sbjct: 3 EQVQEVLNKLRPFLLRDGGDVELIDVDDDGVVLLRLMGACGNCPSSTITLKAGIERALMA 62
Query: 144 KIPEIVAVESV 154
++P + +E V
Sbjct: 63 EVPGVREIEQV 73
>gi|390944855|ref|YP_006408616.1| thioredoxin-like protein [Belliella baltica DSM 15883]
gi|390418283|gb|AFL85861.1| thioredoxin-like protein [Belliella baltica DSM 15883]
Length = 80
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ IE LD IRPYL +DGGNV + E+ D V+RL+L GAC SCP S MT+K G+E +
Sbjct: 5 DKIEQALDNIRPYLEADGGNVRVVELTDEMVLRLELTGACSSCPMSTMTLKAGVEEAIKR 64
Query: 144 KIPEIVAVESV 154
IPEI+ VE++
Sbjct: 65 AIPEIIRVEAI 75
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAV 215
+E+N++ IE+ L+ IRPYL A GG++ +V + DE ++++ +TG + MT++ V
Sbjct: 1 MEMNDK-IEQALDNIRPYL-EADGGNVRVVELTDEMVLRLELTGACSSCPMSTMTLKAGV 58
Query: 216 TQKLREKIPAIAAVQ 230
+ ++ IP I V+
Sbjct: 59 EEAIKRAIPEIIRVE 73
>gi|398016839|ref|XP_003861607.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499834|emb|CBZ34907.1| hypothetical protein, conserved [Leishmania donovani]
Length = 284
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP L +DGGNV ++D V L L+G+C SCPSS +T+K GIER LM IPE+V +
Sbjct: 196 IRPMLRADGGNVRFIDMDEGTVFLLLEGSCKSCPSSHVTLKSGIERMLMHWIPEVVEAQE 255
Query: 154 VADEETGLELNEENIEKVLEE 174
V+DE L+E+ + K L+E
Sbjct: 256 VSDEVAVDILSEKRLRKQLKE 276
>gi|260574570|ref|ZP_05842574.1| Scaffold protein Nfu/NifU [Rhodobacter sp. SW2]
gi|259023466|gb|EEW26758.1| Scaffold protein Nfu/NifU [Rhodobacter sp. SW2]
Length = 186
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 74 PDSAIELPLTAENIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMT 132
PDS I I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T
Sbjct: 108 PDSDI-----VRQIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLT 162
Query: 133 MKMGIERRLMEKIPEIVAVESVA 155
+KMGIE L IPE++ V SVA
Sbjct: 163 LKMGIENLLRHYIPEVLEVRSVA 185
>gi|298490557|ref|YP_003720734.1| Fe-S cluster assembly protein NifU ['Nostoc azollae' 0708]
gi|298232475|gb|ADI63611.1| Fe-S cluster assembly protein NifU ['Nostoc azollae' 0708]
Length = 306
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L++++G+ V++ LQGACGSC SS T+K+ IE RL ++I
Sbjct: 236 IQKVLDEEVRPVLIADGGDVELYDVEGDKVKVVLQGACGSCSSSTATLKIAIESRLRDRI 295
Query: 146 PEIVAVESV 154
+ + VE+V
Sbjct: 296 SKEIIVEAV 304
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 168 IEKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREK 222
I+KVL EE+RP L+ A GG +EL ++ VKV + G ++ T+++A+ +LR++
Sbjct: 236 IQKVLDEEVRPVLI-ADGGDVELYDVEGDKVKVVLQGACGSCSSSTATLKIAIESRLRDR 294
Query: 223 I 223
I
Sbjct: 295 I 295
>gi|39995588|ref|NP_951539.1| thioredoxin/NifU-like domain-containing protein [Geobacter
sulfurreducens PCA]
gi|409911045|ref|YP_006889510.1| thioredoxin/NifU-like domain-containing protein [Geobacter
sulfurreducens KN400]
gi|39982351|gb|AAR33812.1| thioredoxin/NifU-like domain protein [Geobacter sulfurreducens PCA]
gi|298504607|gb|ADI83330.1| thioredoxin/NifU-like domain protein [Geobacter sulfurreducens
KN400]
Length = 74
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E+++ VLD +RP L +DGG+V L E+ + VV++KL GACG CP S MT+KMGIER L E
Sbjct: 3 EDVKKVLDLVRPALQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERTLKE 62
Query: 144 KIPEIVAVESV 154
K+P + V SV
Sbjct: 63 KVPGVKEVVSV 73
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAA----GVMTVRVAVTQKLR 220
E+++KVL+ +RP L A GG +ELV + E +VKV++ G MT+++ + + L+
Sbjct: 3 EDVKKVLDLVRPAL-QADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERTLK 61
Query: 221 EKIPAIAAV 229
EK+P + V
Sbjct: 62 EKVPGVKEV 70
>gi|338213103|ref|YP_004657158.1| nitrogen-fixing NifU domain-containing protein [Runella
slithyformis DSM 19594]
gi|336306924|gb|AEI50026.1| nitrogen-fixing NifU domain-containing protein [Runella
slithyformis DSM 19594]
Length = 87
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 78 IELPLTAENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMG 136
++ L +E+ L+ IRPYL +DGGNVA+ EI D VRL+L G+C SCP S MT K G
Sbjct: 4 LQADLLKSRVETALNSIRPYLEADGGNVAVKEITDDMTVRLELIGSCSSCPMSTMTFKAG 63
Query: 137 IERRLMEKIPEIVAVESV 154
+E +++ +PEI VE++
Sbjct: 64 LEEAILKSVPEIRKVEAI 81
>gi|51892183|ref|YP_074874.1| NifU-like nitrogen fixation protein [Symbiobacterium thermophilum
IAM 14863]
gi|51855872|dbj|BAD40030.1| NifU-like nitrogen fixation protein [Symbiobacterium thermophilum
IAM 14863]
Length = 77
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E +E LD IRP + DGG V L ++ V R+++ GACG CP S MT+KMGIER + ++
Sbjct: 8 ERVERALDLIRPAIRMDGGEVELVAVEDGVARIRMVGACGGCPMSTMTLKMGIERAVRQQ 67
Query: 145 IPEIVAVESV 154
+PEI AVE+V
Sbjct: 68 VPEIRAVEAV 77
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAG----VMTVRVAVTQKLRE 221
E +E+ L+ IRP + GG +ELV +++ + ++R+ G G MT+++ + + +R+
Sbjct: 8 ERVERALDLIRPA-IRMDGGEVELVAVEDGVARIRMVGACGGCPMSTMTLKMGIERAVRQ 66
Query: 222 KIPAIAAVQ 230
++P I AV+
Sbjct: 67 QVPEIRAVE 75
>gi|91089707|ref|XP_974909.1| PREDICTED: similar to AGAP000598-PA [Tribolium castaneum]
gi|270011317|gb|EFA07765.1| hypothetical protein TcasGA2_TC005319 [Tribolium castaneum]
Length = 244
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ D +V+LKLQGAC SCPSS++T+K G++ L I
Sbjct: 165 IKELLDTRIRPTVQEDGGDIIFMGYDDGIVKLKLQGACTSCPSSIVTLKNGVQNMLQFYI 224
Query: 146 PEIVAVESVADEE 158
PE++ VE V DEE
Sbjct: 225 PEVLGVEQVQDEE 237
>gi|146089377|ref|XP_001470367.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070400|emb|CAM68738.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 284
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP L +DGGNV ++D V L L+G+C SCPSS +T+K GIER LM IPE+V +
Sbjct: 196 IRPMLRADGGNVRFIDMDEGTVFLLLEGSCKSCPSSHVTLKSGIERMLMHWIPEVVEAQE 255
Query: 154 VADEETGLELNEENIEKVLEE 174
V+DE L+E+ + K L+E
Sbjct: 256 VSDEVAVDILSEKRLRKQLKE 276
>gi|374602839|ref|ZP_09675827.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus
dendritiformis C454]
gi|374391598|gb|EHQ62932.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus
dendritiformis C454]
Length = 81
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 52/72 (72%)
Query: 83 TAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
T + + VLD++RP+L DGG+V L +++ +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 9 TYDEVLEVLDKLRPFLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALV 68
Query: 143 EKIPEIVAVESV 154
E++ I V V
Sbjct: 69 EEVEGITEVVQV 80
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ + +VL+++RP+L GG +ELV +++ IVK+R+ G + +T++ + + L E
Sbjct: 11 DEVLEVLDKLRPFL-QRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVE 69
Query: 222 KIPAIAAV 229
++ I V
Sbjct: 70 EVEGITEV 77
>gi|345020858|ref|ZP_08784471.1| nitrogen fixation protein [Ornithinibacillus scapharcae TW25]
Length = 74
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ VL+++RP+L+ DGG+V L ++D + +V L+L GACG+CPSS +T+K GIER LM
Sbjct: 3 EQVQEVLNKLRPFLLRDGGDVELIDVDDDGIVLLRLMGACGNCPSSTITLKAGIERALMA 62
Query: 144 KIPEIVAVESV 154
++P + +E V
Sbjct: 63 EVPGVKEIEQV 73
>gi|91200475|emb|CAJ73523.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 72
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 50/68 (73%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E IE L IRP L +DGG++ L + + +V+++L+GACGSCPSS+ T+K G+E RL E
Sbjct: 3 EKIEEALKGIRPALQADGGDIELVDYEDGIVKVRLKGACGSCPSSLATLKYGVEARLKEI 62
Query: 145 IPEIVAVE 152
IPEI +VE
Sbjct: 63 IPEIESVE 70
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLR 220
+E IE+ L+ IRP L A GG +ELV ++ IVKVR+ G + + T++ V +L+
Sbjct: 2 KEKIEEALKGIRPALQ-ADGGDIELVDYEDGIVKVRLKGACGSCPSSLATLKYGVEARLK 60
Query: 221 EKIPAIAAVQL 231
E IP I +V+L
Sbjct: 61 EIIPEIESVEL 71
>gi|404497924|ref|YP_006722030.1| thioredoxin/NifU-like domain-containing protein [Geobacter
metallireducens GS-15]
gi|418067008|ref|ZP_12704362.1| nitrogen-fixing NifU domain protein [Geobacter metallireducens
RCH3]
gi|78195527|gb|ABB33294.1| thioredoxin/NifU-like domain protein [Geobacter metallireducens
GS-15]
gi|373559579|gb|EHP85872.1| nitrogen-fixing NifU domain protein [Geobacter metallireducens
RCH3]
Length = 74
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ VLD +RP L +DGG+V L E+ + VV++KL GACG CP S MT+KMGIER L E
Sbjct: 3 EEVKKVLDTVRPALQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERTLKE 62
Query: 144 KIPEIVAVESV 154
K+P + V SV
Sbjct: 63 KVPGVKEVISV 73
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAA----GVMTVRVAVTQKLR 220
E ++KVL+ +RP L A GG +ELV + E +VKV++ G MT+++ + + L+
Sbjct: 3 EEVKKVLDTVRPAL-QADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERTLK 61
Query: 221 EKIPAIAAV 229
EK+P + V
Sbjct: 62 EKVPGVKEV 70
>gi|337285384|ref|YP_004624857.1| nitrogen-fixing NifU domain-containing protein [Thermodesulfatator
indicus DSM 15286]
gi|335358212|gb|AEH43893.1| nitrogen-fixing NifU domain protein [Thermodesulfatator indicus DSM
15286]
Length = 74
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E L ++RP L +DGG+V L E+ + +V+L+LQGAC CP S T+KMGIER L +
Sbjct: 3 EEVEKALQKVRPMLQADGGDVELVEVTEDGIVKLRLQGACKGCPMSTYTLKMGIERFLKK 62
Query: 144 KIPEIVAVESVA 155
++PE+ AVE V+
Sbjct: 63 EVPEVKAVEEVS 74
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAG----VMTVRVAVTQKLR 220
E +EK L+++RP L A GG +ELV + E IVK+R+ G G T+++ + + L+
Sbjct: 3 EEVEKALQKVRPML-QADGGDVELVEVTEDGIVKLRLQGACKGCPMSTYTLKMGIERFLK 61
Query: 221 EKIPAIAAVQ 230
+++P + AV+
Sbjct: 62 KEVPEVKAVE 71
>gi|83815451|ref|YP_444955.1| hypothetical protein SRU_0820 [Salinibacter ruber DSM 13855]
gi|294506813|ref|YP_003570871.1| hypothetical protein SRM_00998 [Salinibacter ruber M8]
gi|83756845|gb|ABC44958.1| conserved domain protein [Salinibacter ruber DSM 13855]
gi|294343141|emb|CBH23919.1| conserved hypothetical protein [Salinibacter ruber M8]
Length = 101
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+NIE LD IRPYL++DGG+V L + + VV L+L GACGSCP S MT++ GIE+ L
Sbjct: 25 DNIEEALDTIRPYLMADGGSVRLLNVTADYVVELELLGACGSCPMSTMTLRAGIEQALKR 84
Query: 144 KIPEIVAVESV 154
+P++ VE+V
Sbjct: 85 SVPKVKRVEAV 95
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTID-EPIVKVRITGPAA----GVMTVRVAVTQKLR 220
+NIE+ L+ IRPYL+ A GGS+ L+ + + +V++ + G MT+R + Q L+
Sbjct: 25 DNIEEALDTIRPYLM-ADGGSVRLLNVTADYVVELELLGACGSCPMSTMTLRAGIEQALK 83
Query: 221 EKIPAIAAVQ 230
+P + V+
Sbjct: 84 RSVPKVKRVE 93
>gi|157804286|gb|ABV79889.1| NifU [Anabaena siamensis TISTR 8012]
Length = 195
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +R LI+DGG+V L++I+G+ V++KLQGACGSC SS T+K+ IE RL ++I
Sbjct: 127 IQKVLDEEVRLVLIADGGDVELYDIEGDKVKVKLQGACGSCSSSTATLKIAIEARLRDRI 186
Query: 146 PEIVAVESV 154
+ + VE+V
Sbjct: 187 SKDIIVEAV 195
>gi|427715432|ref|YP_007063426.1| Fe-S cluster assembly protein NifU [Calothrix sp. PCC 7507]
gi|427347868|gb|AFY30592.1| Fe-S cluster assembly protein NifU [Calothrix sp. PCC 7507]
Length = 305
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L++I+G+ V++ LQGACGSC SS T+K+ IE RL +++
Sbjct: 233 IQKVLDEEVRPVLIADGGDVELYDIEGDRVKVLLQGACGSCSSSTATLKIAIEARLRDRV 292
Query: 146 PEIVAVESV 154
+ + VE+V
Sbjct: 293 SQNLVVEAV 301
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 14/120 (11%)
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEI---VAVESV-ADEETGLELNEEN----I 168
+K G CGSC +++ + +++ + VA + V A ++T L I
Sbjct: 174 VKAGGGCGSCLANIDDIIKDVQQSATPALNNYGVKVATDIVTAKQQTQRPLTNVQRIALI 233
Query: 169 EKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREKI 223
+KVL EE+RP L+ A GG +EL I+ VKV + G ++ T+++A+ +LR+++
Sbjct: 234 QKVLDEEVRPVLI-ADGGDVELYDIEGDRVKVLLQGACGSCSSSTATLKIAIEARLRDRV 292
>gi|284036029|ref|YP_003385959.1| nitrogen-fixing NifU domain-containing protein [Spirosoma linguale
DSM 74]
gi|283815322|gb|ADB37160.1| nitrogen-fixing NifU domain protein [Spirosoma linguale DSM 74]
Length = 88
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
+E LD +RPYL +DGGNV + EI + VRL+L G+CGSCP S MT K G+E +++ +
Sbjct: 14 VERALDSMRPYLAADGGNVKVLEITEDKTVRLELVGSCGSCPMSAMTFKGGLEEAILKAV 73
Query: 146 PEIVAVESV 154
PEI VE+V
Sbjct: 74 PEITKVEAV 82
>gi|261409236|ref|YP_003245477.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|315649387|ref|ZP_07902475.1| nitrogen-fixing NifU domain protein [Paenibacillus vortex V453]
gi|329926903|ref|ZP_08281306.1| NifU-like protein [Paenibacillus sp. HGF5]
gi|261285699|gb|ACX67670.1| nitrogen-fixing NifU domain protein [Paenibacillus sp. Y412MC10]
gi|315275163|gb|EFU38533.1| nitrogen-fixing NifU domain protein [Paenibacillus vortex V453]
gi|328938890|gb|EGG35263.1| NifU-like protein [Paenibacillus sp. HGF5]
Length = 81
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 52/70 (74%), Gaps = 3/70 (4%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + VLD++RP+L DGG+V L +++ +V+LKL GACGSCPSS +T+K GIER L+E+
Sbjct: 11 DEVAEVLDKLRPFLQRDGGDVELVDVEDGIVKLKLMGACGSCPSSTITLKAGIERALVEE 70
Query: 145 ---IPEIVAV 151
I E+V V
Sbjct: 71 VEGIQEVVQV 80
>gi|354584833|ref|ZP_09003725.1| nitrogen-fixing NifU domain protein [Paenibacillus lactis 154]
gi|353191384|gb|EHB56891.1| nitrogen-fixing NifU domain protein [Paenibacillus lactis 154]
Length = 81
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 52/70 (74%), Gaps = 3/70 (4%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + VLD++RP+L DGG+V L +++ +V+LKL GACGSCPSS +T+K GIER L+E+
Sbjct: 11 DEVAEVLDKLRPFLQRDGGDVELVDVEDGIVKLKLMGACGSCPSSTITLKAGIERALVEE 70
Query: 145 ---IPEIVAV 151
I E+V V
Sbjct: 71 VEGIQEVVQV 80
>gi|117924033|ref|YP_864650.1| NifU domain-containing protein [Magnetococcus marinus MC-1]
gi|117607789|gb|ABK43244.1| nitrogen-fixing NifU domain protein [Magnetococcus marinus MC-1]
Length = 76
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E I +VL EIRP L DGG+V ++ + NVV+++L+GACGSCP ++MT+K GIER + E
Sbjct: 3 EKILAVLAEIRPMLQRDGGDVEFVDLTEDNVVQVRLRGACGSCPGAMMTLKGGIERLMKE 62
Query: 144 KIPEIVAVESV 154
+IPE+ +VE+V
Sbjct: 63 RIPEVHSVENV 73
>gi|434407222|ref|YP_007150107.1| Modular FeS cluster scaffolding protein NifU [Cylindrospermum
stagnale PCC 7417]
gi|428261477|gb|AFZ27427.1| Modular FeS cluster scaffolding protein NifU [Cylindrospermum
stagnale PCC 7417]
Length = 303
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L++++G+ V++ LQGACGSC SS T+K+ IE RL +++
Sbjct: 231 IQKVLDEEVRPVLIADGGDVELYDVEGDRVKVILQGACGSCSSSTATLKIAIEARLQDRV 290
Query: 146 PEIVAVESVA 155
+ + VE+V+
Sbjct: 291 SKNLVVEAVS 300
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 13/119 (10%)
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEET-GLELNEEN------IE 169
+K G CGSC +++ + +++ + + V++ D T G + N I+
Sbjct: 173 VKAGGGCGSCLANIDDIIKEVQQEVATSLLNNNGVKTTTDISTSGKQKPLTNVQRIALIQ 232
Query: 170 KVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREKI 223
KVL EE+RP L+ A GG +EL ++ VKV + G ++ T+++A+ +L++++
Sbjct: 233 KVLDEEVRPVLI-ADGGDVELYDVEGDRVKVILQGACGSCSSSTATLKIAIEARLQDRV 290
>gi|186680943|ref|YP_001864139.1| Fe-S cluster assembly protein NifU [Nostoc punctiforme PCC 73102]
gi|186463395|gb|ACC79196.1| Fe-S cluster assembly protein NifU [Nostoc punctiforme PCC 73102]
Length = 299
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L++++G+ V++ LQGACGSC SS T+K+ IE RL +++
Sbjct: 231 IQKVLDEEVRPVLIADGGDVELYDVEGDRVKVVLQGACGSCSSSTATLKIAIEARLQDRV 290
Query: 146 PEIVAVESV 154
+ + VE+V
Sbjct: 291 SKSLVVEAV 299
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 14/120 (11%)
Query: 117 LKLQGACGSCPSSVMTMKMGIERRL----MEKIPEIVAVESVADEETGLELNEENI---E 169
+K G CGSC +++ + +++ + VA E V +E L N + I +
Sbjct: 174 VKAGGGCGSCLANIDDIIRSVQQEYASPALNNYGVQVATEIVTSKERSL-TNVQKIALIQ 232
Query: 170 KVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREKIP 224
KVL EE+RP L+ A GG +EL ++ VKV + G ++ T+++A+ +L++++
Sbjct: 233 KVLDEEVRPVLI-ADGGDVELYDVEGDRVKVVLQGACGSCSSSTATLKIAIEARLQDRVS 291
>gi|414078579|ref|YP_006997897.1| Fe-S cluster assembly protein NifU [Anabaena sp. 90]
gi|413971995|gb|AFW96084.1| Fe-S cluster assembly protein NifU [Anabaena sp. 90]
Length = 299
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 10/106 (9%)
Query: 59 KRGAARRNVIKAVAT-----PDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALH 108
K+ AA +N+ A P S + PLT I+ VLDE +RP LI+DGG+V L+
Sbjct: 194 KQEAANKNLYSYKAKAKTEIPSSEPQKPLTTVQKIALIQKVLDEEVRPVLIADGGDVELY 253
Query: 109 EIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 154
+++G+ +++ L+GACGSC SS T+K+ IE RL ++I + + VE+V
Sbjct: 254 DVEGDKIKVILKGACGSCSSSTATLKIAIEARLRDRISKEIIVEAV 299
>gi|406660704|ref|ZP_11068833.1| Fe/S biogenesis protein nfuA [Cecembia lonarensis LW9]
gi|405555429|gb|EKB50459.1| Fe/S biogenesis protein nfuA [Cecembia lonarensis LW9]
Length = 82
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E L+ IRPYL +DGGNV + EI D ++RL+L G C SCP S MT+K G+E +
Sbjct: 7 EKVEKALNSIRPYLEADGGNVKIVEITDDMILRLELTGTCSSCPMSSMTLKAGVEEAIKR 66
Query: 144 KIPEIVAVESV 154
IPEIV VE++
Sbjct: 67 DIPEIVKVEAI 77
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVTQKLR 220
E +EK L IRPYL A GG++++V I D+ I+++ +TG + MT++ V + ++
Sbjct: 7 EKVEKALNSIRPYL-EADGGNVKIVEITDDMILRLELTGTCSSCPMSSMTLKAGVEEAIK 65
Query: 221 EKIPAIAAVQ 230
IP I V+
Sbjct: 66 RDIPEIVKVE 75
>gi|375310171|ref|ZP_09775447.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
Aloe-11]
gi|375077764|gb|EHS55996.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
Aloe-11]
Length = 81
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 48/61 (78%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + VLD++RP+L DGG+V L +++ +V+LKL GACGSCPSS +T+K GIER L+E+
Sbjct: 11 DEVADVLDKLRPFLQRDGGDVELVDVEDGIVKLKLVGACGSCPSSTITLKAGIERALLEE 70
Query: 145 I 145
+
Sbjct: 71 V 71
>gi|308070638|ref|YP_003872243.1| thioredoxin-like protein [Paenibacillus polymyxa E681]
gi|374320176|ref|YP_005073305.1| thioredoxin-like protein [Paenibacillus terrae HPL-003]
gi|305859917|gb|ADM71705.1| Thioredoxin-like protein [Paenibacillus polymyxa E681]
gi|357199185|gb|AET57082.1| thioredoxin-like protein [Paenibacillus terrae HPL-003]
Length = 81
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 48/61 (78%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + VLD++RP+L DGG+V L +++ +V+LKL GACGSCPSS +T+K GIER L+E+
Sbjct: 11 DEVADVLDKLRPFLQRDGGDVELVDVEDGIVKLKLVGACGSCPSSTITLKAGIERALLEE 70
Query: 145 I 145
+
Sbjct: 71 V 71
>gi|440681698|ref|YP_007156493.1| Fe-S cluster assembly protein NifU [Anabaena cylindrica PCC 7122]
gi|428678817|gb|AFZ57583.1| Fe-S cluster assembly protein NifU [Anabaena cylindrica PCC 7122]
Length = 304
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L++I+GN V++ L+GACGSC SS T+K+ IE RL ++I
Sbjct: 236 IQKVLDEEVRPVLIADGGDVELYDIEGNKVQVILKGACGSCSSSTATLKVAIEARLRDRI 295
Query: 146 PEIVAVESV 154
+ + VE+V
Sbjct: 296 NKEIIVEAV 304
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 19/124 (15%)
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEEN--------- 167
+K G CGSC + + + +++ ++ V++ + + + NE
Sbjct: 174 VKAGGGCGSCLTKIDDIIREVKQETAKQTLNTNGVKATTEIASSM-FNEGQQRPLTNVQR 232
Query: 168 ---IEKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKL 219
I+KVL EE+RP L+ A GG +EL I+ V+V + G ++ T++VA+ +L
Sbjct: 233 IALIQKVLDEEVRPVLI-ADGGDVELYDIEGNKVQVILKGACGSCSSSTATLKVAIEARL 291
Query: 220 REKI 223
R++I
Sbjct: 292 RDRI 295
>gi|379719077|ref|YP_005311208.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus
mucilaginosus 3016]
gi|386721668|ref|YP_006187993.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus
mucilaginosus K02]
gi|378567749|gb|AFC28059.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus
mucilaginosus 3016]
gi|384088792|gb|AFH60228.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus
mucilaginosus K02]
Length = 84
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 52/72 (72%)
Query: 83 TAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
T + + VLD++RP+L DGG+V L +++ +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 12 TYDEVLEVLDKLRPFLQRDGGDVELVDVEDGIVKLRLVGACGSCPSSTITLKAGIERALL 71
Query: 143 EKIPEIVAVESV 154
E++ I V V
Sbjct: 72 EEVEGIQEVMQV 83
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ + +VL+++RP+L GG +ELV +++ IVK+R+ G + +T++ + + L E
Sbjct: 14 DEVLEVLDKLRPFL-QRDGGDVELVDVEDGIVKLRLVGACGSCPSSTITLKAGIERALLE 72
Query: 222 KIPAIAAV 229
++ I V
Sbjct: 73 EVEGIQEV 80
>gi|405971247|gb|EKC36093.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Crassostrea gigas]
gi|405971248|gb|EKC36094.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Crassostrea gigas]
Length = 210
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + +V+LK+QG+C SCPSSV+T+K G++ L I
Sbjct: 116 IKELLDTRIRPTVQEDGGDIVYMGFEDGIVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYI 175
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVLEEIRP 177
PE++ VE + DE + E E +EK LEE P
Sbjct: 176 PEVMGVEQIEDEVDDVNKTEFEKLEKSLEEKSP 208
>gi|337747979|ref|YP_004642141.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus
mucilaginosus KNP414]
gi|336299168|gb|AEI42271.1| nitrogen-fixing NifU domain protein [Paenibacillus mucilaginosus
KNP414]
Length = 82
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 52/72 (72%)
Query: 83 TAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
T + + VLD++RP+L DGG+V L +++ +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 10 TYDEVLEVLDKLRPFLQRDGGDVELVDVEDGIVKLRLVGACGSCPSSTITLKAGIERALL 69
Query: 143 EKIPEIVAVESV 154
E++ I V V
Sbjct: 70 EEVEGIQEVMQV 81
Score = 36.6 bits (83), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
+ + +VL+++RP+L GG +ELV +++ IVK+R+ G + +T++ + + L E
Sbjct: 12 DEVLEVLDKLRPFL-QRDGGDVELVDVEDGIVKLRLVGACGSCPSSTITLKAGIERALLE 70
Query: 222 KIPAIAAV 229
++ I V
Sbjct: 71 EVEGIQEV 78
>gi|197119169|ref|YP_002139596.1| thioredoxin/NifU-like domain-containing protein [Geobacter
bemidjiensis Bem]
gi|197088529|gb|ACH39800.1| thioredoxin/NifU-like domain protein [Geobacter bemidjiensis Bem]
Length = 73
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++++L++IRP L +DGG+V L E+ D +V+++L GACG CP S MT+KMGIER + E
Sbjct: 3 EEVKAILEQIRPALQADGGDVELVEVTDDGIVKVRLVGACGHCPMSTMTLKMGIERTIKE 62
Query: 144 KIP---EIVAV 151
K+P E+VAV
Sbjct: 63 KVPGIKEVVAV 73
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKLR 220
E ++ +LE+IRP L A GG +ELV + D+ IVKVR+ G MT+++ + + ++
Sbjct: 3 EEVKAILEQIRPAL-QADGGDVELVEVTDDGIVKVRLVGACGHCPMSTMTLKMGIERTIK 61
Query: 221 EKIPAIAAV 229
EK+P I V
Sbjct: 62 EKVPGIKEV 70
>gi|308174916|ref|YP_003921621.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens DSM 7]
gi|384160835|ref|YP_005542908.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens TA208]
gi|384165679|ref|YP_005547058.1| nitrogen fixation protein yutI [Bacillus amyloliquefaciens LL3]
gi|384169911|ref|YP_005551289.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens XH7]
gi|398306234|ref|ZP_10509820.1| (Fe-S)-binding protein [Bacillus vallismortis DV1-F-3]
gi|307607780|emb|CBI44151.1| putative iron-sulfur scaffold protein [Bacillus amyloliquefaciens
DSM 7]
gi|328554923|gb|AEB25415.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens TA208]
gi|328913234|gb|AEB64830.1| Putative nitrogen fixation protein yutI [Bacillus amyloliquefaciens
LL3]
gi|341829190|gb|AEK90441.1| putative iron-sulfur scaffold protein [Bacillus amyloliquefaciens
XH7]
Length = 78
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ VLD++RP+L+ DGG+ L +ID +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 8 EQVQEVLDKLRPFLLRDGGDCELVDIDEGIVKLRLLGACGSCPSSTITLKAGIERALL 65
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAA 206
+E +++VL+++RP+L+ GG ELV IDE IVK+R+ G
Sbjct: 7 KEQVQEVLDKLRPFLL-RDGGDCELVDIDEGIVKLRLLGACG 47
>gi|410030430|ref|ZP_11280260.1| thioredoxin-like protein [Marinilabilia sp. AK2]
Length = 82
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERR 140
L E +E L+ IRPYL +DGGNV + EI D V++L+L G C SCP S MT+K G+E
Sbjct: 4 LLLEKVEKALNTIRPYLEADGGNVKVVEITDEMVLKLELTGTCSSCPMSTMTLKAGVEEA 63
Query: 141 LMEKIPEIVAVESV 154
+ IPEIV VE++
Sbjct: 64 IKRDIPEIVKVEAI 77
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKLR 220
E +EK L IRPYL A GG++++V I DE ++K+ +TG + MT++ V + ++
Sbjct: 7 EKVEKALNTIRPYL-EADGGNVKVVEITDEMVLKLELTGTCSSCPMSTMTLKAGVEEAIK 65
Query: 221 EKIPAIAAVQ 230
IP I V+
Sbjct: 66 RDIPEIVKVE 75
>gi|426404273|ref|YP_007023244.1| nifU related protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425860941|gb|AFY01977.1| nifU related protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 186
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 84 AENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
A NI+SVL+ EIRP + DGG++ H+ + NV+ + ++GAC CPSS +T+K GIE R+
Sbjct: 115 ARNIKSVLNREIRPVVALDGGDIVFHKYENNVLYIHMKGACSGCPSSTVTLKEGIEVRMK 174
Query: 143 EKIPEIVAVESV 154
E PEI+ V SV
Sbjct: 175 ELFPEIIEVVSV 186
>gi|303245787|ref|ZP_07332070.1| nitrogen-fixing NifU domain protein [Desulfovibrio fructosovorans
JJ]
gi|302493050|gb|EFL52915.1| nitrogen-fixing NifU domain protein [Desulfovibrio fructosovorans
JJ]
Length = 73
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E+ L +IRP L +DGG+V L E+ DG +V+++L GAC CP S MT+K GIER LM+
Sbjct: 3 EKVEAALAKIRPSLQADGGDVELVEVTDGGIVKVRLTGACKGCPMSQMTLKNGIERILMQ 62
Query: 144 KIPEIVAVESV 154
+P + AVE+V
Sbjct: 63 SVPGVKAVEAV 73
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVTQKL 219
+E +E L +IRP L A GG +ELV + D IVKVR+TG G MT++ + + L
Sbjct: 2 QEKVEAALAKIRPSLQ-ADGGDVELVEVTDGGIVKVRLTGACKGCPMSQMTLKNGIERIL 60
Query: 220 REKIPAIAAVQ 230
+ +P + AV+
Sbjct: 61 MQSVPGVKAVE 71
>gi|148263012|ref|YP_001229718.1| NifU domain-containing protein [Geobacter uraniireducens Rf4]
gi|146396512|gb|ABQ25145.1| nitrogen-fixing NifU domain protein [Geobacter uraniireducens Rf4]
Length = 73
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ VLD IRP L +DGG+V L E+ + VV++KL GACG CP S MT+KMGIER L E
Sbjct: 3 EEVKKVLDLIRPNLQADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERTLKE 62
Query: 144 KIPEIVAVESV 154
K+P + V SV
Sbjct: 63 KVPGVKEVISV 73
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAA----GVMTVRVAVTQKLR 220
E ++KVL+ IRP L A GG +ELV + E +VKV++ G MT+++ + + L+
Sbjct: 3 EEVKKVLDLIRPNL-QADGGDVELVEVTEDGVVKVKLVGACGHCPMSTMTLKMGIERTLK 61
Query: 221 EKIPAIAAV 229
EK+P + V
Sbjct: 62 EKVPGVKEV 70
>gi|322420167|ref|YP_004199390.1| nitrogen-fixing NifU domain-containing protein [Geobacter sp. M18]
gi|320126554|gb|ADW14114.1| nitrogen-fixing NifU domain protein [Geobacter sp. M18]
Length = 73
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++++L+ IRP L +DGG+V L E+ D VV+++L GACG CP S MT+KMGIER + E
Sbjct: 3 EEVKAILENIRPALQADGGDVELVEVTDDGVVKVRLVGACGHCPMSTMTLKMGIERTIKE 62
Query: 144 KIPEIVAVESV 154
KIP + V SV
Sbjct: 63 KIPGVKEVVSV 73
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKLR 220
E ++ +LE IRP L A GG +ELV + D+ +VKVR+ G MT+++ + + ++
Sbjct: 3 EEVKAILENIRPAL-QADGGDVELVEVTDDGVVKVRLVGACGHCPMSTMTLKMGIERTIK 61
Query: 221 EKIPAIAAV 229
EKIP + V
Sbjct: 62 EKIPGVKEV 70
>gi|110637337|ref|YP_677544.1| hypothetical protein CHU_0925 [Cytophaga hutchinsonii ATCC 33406]
gi|110280018|gb|ABG58204.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 86
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ +E L+ IRPYLI+DGGNV L EI + +V+L+L GACG+CP S MT+K G+E + +
Sbjct: 12 DRVEQALESIRPYLITDGGNVRLVEITEDMIVKLELLGACGTCPMSAMTLKAGVEESIRK 71
Query: 144 KIPEIVAVESVADEE 158
+PEI V ++ E+
Sbjct: 72 AVPEIKGVFAINAEQ 86
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAA----GVMTVRVAVTQKLR 220
+ +E+ LE IRPYL+ GG++ LV I E IVK+ + G MT++ V + +R
Sbjct: 12 DRVEQALESIRPYLI-TDGGNVRLVEITEDMIVKLELLGACGTCPMSAMTLKAGVEESIR 70
Query: 221 EKIPAIAAV 229
+ +P I V
Sbjct: 71 KAVPEIKGV 79
>gi|407799894|ref|ZP_11146762.1| nifU domain protein [Oceaniovalibus guishaninsula JLT2003]
gi|407057886|gb|EKE43854.1| nifU domain protein [Oceaniovalibus guishaninsula JLT2003]
Length = 187
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 74 PDSAIELPLTAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMT 132
PD+AI I+ +LD +RP + DGG++ H D +V L +QGAC CPSS +T
Sbjct: 109 PDAAI-----VGQIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLT 163
Query: 133 MKMGIERRLMEKIPEIVAVESVA 155
+KMGIE L IPE+V V VA
Sbjct: 164 LKMGIENLLRHYIPEVVEVRPVA 186
>gi|354568530|ref|ZP_08987694.1| Fe-S cluster assembly protein NifU [Fischerella sp. JSC-11]
gi|353540253|gb|EHC09730.1| Fe-S cluster assembly protein NifU [Fischerella sp. JSC-11]
Length = 297
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L +++G+ V++ LQGACGSC SS+ T+K+ IE RL +++
Sbjct: 229 IQRVLDEEVRPILIADGGDVELFDVEGDHVKVILQGACGSCSSSIATLKIAIESRLRDRV 288
Query: 146 PEIVAVESV 154
+ + VE+V
Sbjct: 289 SKDIVVEAV 297
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 34/128 (26%)
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEEN--------- 167
+K G CGSC +S+ + +++ E +V +V++ L++ N
Sbjct: 174 VKAGGGCGSCLASIDDIIASVQK-------EKASVTTVSNS-----LSQTNGKSAVKTLT 221
Query: 168 -------IEKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAV 215
I++VL EE+RP L+ A GG +EL ++ VKV + G ++ + T+++A+
Sbjct: 222 PVQKIALIQRVLDEEVRPILI-ADGGDVELFDVEGDHVKVILQGACGSCSSSIATLKIAI 280
Query: 216 TQKLREKI 223
+LR+++
Sbjct: 281 ESRLRDRV 288
>gi|88801953|ref|ZP_01117481.1| NifU-like protein [Polaribacter irgensii 23-P]
gi|88782611|gb|EAR13788.1| NifU-like protein [Polaribacter irgensii 23-P]
Length = 78
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 52/73 (71%)
Query: 83 TAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
T EN+E L+EIRP+L+SDGGN+ L I+ VV+++L+GAC C + MT+K G+E +
Sbjct: 6 TLENVEKALEEIRPFLMSDGGNIKLLSIEDGVVKVQLEGACTGCSVNQMTLKNGVEATIK 65
Query: 143 EKIPEIVAVESVA 155
+ P+IV V +VA
Sbjct: 66 KYAPQIVEVINVA 78
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 5/68 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGV----MTVRVAVTQKLRE 221
EN+EK LEEIRP+L+ + GG+++L++I++ +VKV++ G G MT++ V +++
Sbjct: 8 ENVEKALEEIRPFLM-SDGGNIKLLSIEDGVVKVQLEGACTGCSVNQMTLKNGVEATIKK 66
Query: 222 KIPAIAAV 229
P I V
Sbjct: 67 YAPQIVEV 74
>gi|23099811|ref|NP_693277.1| nitrogen fixation protein [Oceanobacillus iheyensis HTE831]
gi|22778042|dbj|BAC14312.1| nitrogen fixation protein (NifU protein) [Oceanobacillus iheyensis
HTE831]
Length = 74
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ VL+++RP+L+ DGG+V L ++D VV L+L GACG+CPSS +T+K GIER LM
Sbjct: 3 EQVQEVLNKLRPFLLRDGGDVELIDVDEEGVVLLRLMGACGNCPSSTITLKAGIERALMA 62
Query: 144 KIPEIVAVESV 154
++P + +E V
Sbjct: 63 EVPGVREIEQV 73
>gi|430749156|ref|YP_007212064.1| thioredoxin-like protein [Thermobacillus composti KWC4]
gi|430733121|gb|AGA57066.1| thioredoxin-like protein [Thermobacillus composti KWC4]
Length = 81
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 50/67 (74%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + VLD++RP+L DGG+V L +++ VV+L+L GACGSCPSS +T+K GIER L+E+
Sbjct: 11 DEVLDVLDKLRPFLQRDGGDVELVDVEDGVVKLRLMGACGSCPSSTITLKAGIERALLEE 70
Query: 145 IPEIVAV 151
+ I V
Sbjct: 71 VEGIQEV 77
>gi|418031576|ref|ZP_12670061.1| iron-sulfur scaffold protein [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|449095663|ref|YP_007428154.1| putative iron-sulfur scaffold protein [Bacillus subtilis XF-1]
gi|351472635|gb|EHA32748.1| iron-sulfur scaffold protein [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|449029578|gb|AGE64817.1| putative iron-sulfur scaffold protein [Bacillus subtilis XF-1]
Length = 86
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ VLD++RP+L+ DGG+ L ++D +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 16 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALL 73
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAA 206
+E +++VL+++RP+L+ GG ELV +DE IVK+R+ G
Sbjct: 15 KEQVQEVLDKLRPFLL-RDGGDCELVDVDEGIVKLRLLGACG 55
>gi|427739702|ref|YP_007059246.1| Modular FeS cluster scaffolding protein NifU [Rivularia sp. PCC
7116]
gi|427374743|gb|AFY58699.1| Modular FeS cluster scaffolding protein NifU [Rivularia sp. PCC
7116]
Length = 301
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE IRP LI+DGG+V L++++ + +R+ L+GACGSC SS+ T+K IE +L E+I
Sbjct: 231 IQKVLDEEIRPILIADGGDVELYDVESDTIRVILKGACGSCSSSLATLKNAIEAKLKERI 290
Query: 146 PEIVAVESVA 155
+ VESV+
Sbjct: 291 SNNITVESVS 300
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 168 IEKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREK 222
I+KVL EEIRP L+ A GG +EL ++ ++V + G ++ + T++ A+ KL+E+
Sbjct: 231 IQKVLDEEIRPILI-ADGGDVELYDVESDTIRVILKGACGSCSSSLATLKNAIEAKLKER 289
Query: 223 I 223
I
Sbjct: 290 I 290
>gi|253700042|ref|YP_003021231.1| nitrogen-fixing NifU domain-containing protein [Geobacter sp. M21]
gi|251774892|gb|ACT17473.1| nitrogen-fixing NifU domain protein [Geobacter sp. M21]
Length = 73
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++++L++IRP L +DGG+V L E+ D +V+++L GACG CP S MT+KMGIER + +
Sbjct: 3 EEVKAILEQIRPALQADGGDVELVEVTDDGIVKVRLVGACGHCPMSTMTLKMGIERTIKD 62
Query: 144 KIP---EIVAV 151
KIP E+VAV
Sbjct: 63 KIPGIKEVVAV 73
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKLR 220
E ++ +LE+IRP L A GG +ELV + D+ IVKVR+ G MT+++ + + ++
Sbjct: 3 EEVKAILEQIRPAL-QADGGDVELVEVTDDGIVKVRLVGACGHCPMSTMTLKMGIERTIK 61
Query: 221 EKIPAIAAV 229
+KIP I V
Sbjct: 62 DKIPGIKEV 70
>gi|299755866|ref|XP_001828936.2| NifU-like protein c [Coprinopsis cinerea okayama7#130]
gi|298411416|gb|EAU92943.2| NifU-like protein c [Coprinopsis cinerea okayama7#130]
Length = 291
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Query: 94 IRPYLISDGGNVALHEIDGN--VVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
+RP ++ DGG++ D N +VR+KL+G+C C SS +T+K GIER LM +PE+ V
Sbjct: 193 VRPAIMEDGGDIEYRGFDENDGIVRVKLKGSCRGCESSSVTLKSGIERMLMHYVPEVKGV 252
Query: 152 ESVADEETGLELNE-ENIEKVLEE 174
E + DEE + L+E E +EK L E
Sbjct: 253 EQILDEEEQIALDEFEKLEKRLAE 276
>gi|221311164|ref|ZP_03593011.1| hypothetical protein Bsubs1_17486 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315491|ref|ZP_03597296.1| hypothetical protein BsubsN3_17402 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320406|ref|ZP_03601700.1| hypothetical protein BsubsJ_17365 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324690|ref|ZP_03605984.1| hypothetical protein BsubsS_17516 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|296331794|ref|ZP_06874261.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675816|ref|YP_003867488.1| iron-sulfur scaffold protein [Bacillus subtilis subsp. spizizenii
str. W23]
gi|311069717|ref|YP_003974640.1| iron-sulfur scaffold protein [Bacillus atrophaeus 1942]
gi|321312766|ref|YP_004205053.1| putative iron-sulfur scaffold protein [Bacillus subtilis BSn5]
gi|350267417|ref|YP_004878724.1| hypothetical protein GYO_3515 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|375363652|ref|YP_005131691.1| Fe/S biogenesis protein nfuA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|384176826|ref|YP_005558211.1| hypothetical protein I33_3321 [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|384266752|ref|YP_005422459.1| Fe/S biogenesis protein nfuA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|394992629|ref|ZP_10385404.1| iron-sulfur scaffold protein [Bacillus sp. 916]
gi|419821917|ref|ZP_14345506.1| (Fe-S)-binding protein [Bacillus atrophaeus C89]
gi|421730387|ref|ZP_16169516.1| (Fe-S)-binding protein [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|428280729|ref|YP_005562464.1| hypothetical protein BSNT_04769 [Bacillus subtilis subsp. natto
BEST195]
gi|429506498|ref|YP_007187682.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|443634273|ref|ZP_21118448.1| iron-sulfur scaffold protein [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|451345641|ref|YP_007444272.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens IT-45]
gi|452856838|ref|YP_007498521.1| Putative nitrogen fixation protein yutI [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|452913781|ref|ZP_21962409.1| nifU-like domain protein [Bacillus subtilis MB73/2]
gi|291485686|dbj|BAI86761.1| hypothetical protein BSNT_04769 [Bacillus subtilis subsp. natto
BEST195]
gi|296151119|gb|EFG92001.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414060|gb|ADM39179.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|310870234|gb|ADP33709.1| putative iron-sulfur scaffold protein [Bacillus atrophaeus 1942]
gi|320019040|gb|ADV94026.1| putative iron-sulfur scaffold protein [Bacillus subtilis BSn5]
gi|349596050|gb|AEP92237.1| conserved domain protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349600304|gb|AEP88092.1| conserved domain protein [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|371569646|emb|CCF06496.1| Fe/S biogenesis protein nfuA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|380500105|emb|CCG51143.1| Fe/S biogenesis protein nfuA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|388473992|gb|EIM10726.1| (Fe-S)-binding protein [Bacillus atrophaeus C89]
gi|393806666|gb|EJD68010.1| iron-sulfur scaffold protein [Bacillus sp. 916]
gi|407076353|gb|EKE49337.1| (Fe-S)-binding protein [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|407962051|dbj|BAM55291.1| (Fe-S)-binding protein [Bacillus subtilis BEST7613]
gi|407966065|dbj|BAM59304.1| (Fe-S)-binding protein [Bacillus subtilis BEST7003]
gi|429488088|gb|AFZ92012.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|443345949|gb|ELS60011.1| iron-sulfur scaffold protein [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|449849399|gb|AGF26391.1| iron-sulfur scaffold protein [Bacillus amyloliquefaciens IT-45]
gi|452081098|emb|CCP22865.1| Putative nitrogen fixation protein yutI [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|452118809|gb|EME09203.1| nifU-like domain protein [Bacillus subtilis MB73/2]
Length = 78
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ VLD++RP+L+ DGG+ L ++D +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 8 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALL 65
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAA 206
+E +++VL+++RP+L+ GG ELV +DE IVK+R+ G
Sbjct: 7 KEQVQEVLDKLRPFLL-RDGGDCELVDVDEGIVKLRLLGACG 47
>gi|24643765|ref|NP_728443.1| CG32857 [Drosophila melanogaster]
gi|45551492|ref|NP_728447.2| CG32500 [Drosophila melanogaster]
gi|45556188|ref|NP_996529.1| CG33502 [Drosophila melanogaster]
gi|74866115|sp|Q8SY96.1|NFU1_DROME RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|17946577|gb|AAL49319.1| RH16335p [Drosophila melanogaster]
gi|22831388|gb|AAG22462.2| CG33502 [Drosophila melanogaster]
gi|22831391|gb|AAN09001.1| CG32857 [Drosophila melanogaster]
gi|45446754|gb|AAN09005.2| CG32500 [Drosophila melanogaster]
gi|220949278|gb|ACL87182.1| CG32500-PA [synthetic construct]
gi|220958368|gb|ACL91727.1| CG32500-PA [synthetic construct]
Length = 283
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 7/97 (7%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ +G VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 146 PEIVAVESVADE-----ETGLELNEENIEKVLEEIRP 177
PE+ +VE V DE E+ E E+N+ K L++ P
Sbjct: 242 PEVESVEQVFDEADRMIESEFERFEKNL-KTLKQQEP 277
>gi|6760408|gb|AAF28338.1|AF213379_1 r10h10-like protein TO42 [Drosophila melanogaster]
gi|6554171|gb|AAF16622.1| TO42 [Drosophila melanogaster]
Length = 286
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 7/97 (7%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ +G VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 185 IKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 244
Query: 146 PEIVAVESVADE-----ETGLELNEENIEKVLEEIRP 177
PE+ +VE V DE E+ E E+N+ K L++ P
Sbjct: 245 PEVESVEQVFDEADRMIESEFERFEKNL-KTLKQQEP 280
>gi|42523787|ref|NP_969167.1| nifU related protein [Bdellovibrio bacteriovorus HD100]
gi|39575994|emb|CAE80160.1| nifU related protein [Bdellovibrio bacteriovorus HD100]
Length = 186
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
NI+SVL+ EIRP + DGG++ H+ + NV+ + ++GAC CPSS +T+K GIE R+ E
Sbjct: 117 NIKSVLNREIRPVVALDGGDIVFHKYENNVLYIHMKGACSGCPSSTVTLKEGIEVRMKEL 176
Query: 145 IPEIVAVESV 154
PEIV V SV
Sbjct: 177 FPEIVEVVSV 186
>gi|47212055|emb|CAF90173.1| unnamed protein product [Tetraodon nigroviridis]
Length = 196
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V +G VV+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 117 IKELLDTRIRPTVQEDGGDVLYRGFEGGVVKLKLQGSCTSCPSSIITLKSGIQNMLQFYI 176
Query: 146 PEIVAVESVADEE 158
PE+ +VE V D+E
Sbjct: 177 PEVESVEQVKDDE 189
>gi|404329556|ref|ZP_10970004.1| nitrogen fixation protein NifU [Sporolactobacillus vineae DSM 21990
= SL153]
Length = 73
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E +E V++++RP+LI DGG+V L + +VR++L GAC +CPSS +T+K GIE+ LME
Sbjct: 3 EQVEEVIEKLRPFLIRDGGDVELLGVHDGIVRVRLLGACQNCPSSTLTLKAGIEQALMEN 62
Query: 145 IPEIVAVESV 154
+P + +E V
Sbjct: 63 VPGVRELEQV 72
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 41/65 (63%), Gaps = 5/65 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLRE 221
E +E+V+E++RP+L+ GG +EL+ + + IV+VR+ G + +T++ + Q L E
Sbjct: 3 EQVEEVIEKLRPFLI-RDGGDVELLGVHDGIVRVRLLGACQNCPSSTLTLKAGIEQALME 61
Query: 222 KIPAI 226
+P +
Sbjct: 62 NVPGV 66
>gi|336323908|ref|YP_004603875.1| nitrogen-fixing NifU domain-containing protein [Flexistipes
sinusarabici DSM 4947]
gi|336107489|gb|AEI15307.1| nitrogen-fixing NifU domain-containing protein [Flexistipes
sinusarabici DSM 4947]
Length = 73
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E VL ++RP L +DGG+V L ++ D VV+++L GACGSCP S MT+K GIE RL E
Sbjct: 3 ERVEEVLQKVRPSLQADGGDVELIDVSDDGVVKVQLTGACGSCPFSTMTLKHGIEMRLKE 62
Query: 144 KIPEI 148
IPE+
Sbjct: 63 AIPEV 67
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKL 219
+E +E+VL+++RP L A GG +EL+ + D+ +VKV++TG MT++ + +L
Sbjct: 2 KERVEEVLQKVRPSL-QADGGDVELIDVSDDGVVKVQLTGACGSCPFSTMTLKHGIEMRL 60
Query: 220 REKIPAIAAV 229
+E IP + V
Sbjct: 61 KEAIPEVKEV 70
>gi|16080275|ref|NP_391102.1| (Fe-S)-binding protein [Bacillus subtilis subsp. subtilis str. 168]
gi|386759807|ref|YP_006233024.1| (Fe-S)-binding protein [Bacillus sp. JS]
gi|402777379|ref|YP_006631323.1| iron-sulfur scaffold protein [Bacillus subtilis QB928]
gi|81342154|sp|O32119.1|YUTI_BACSU RecName: Full=Putative nitrogen fixation protein YutI
gi|2635719|emb|CAB15212.1| putative iron-sulfur scaffold protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|384933090|gb|AFI29768.1| (Fe-S)-binding protein [Bacillus sp. JS]
gi|402482558|gb|AFQ59067.1| Putative iron-sulfur scaffold protein [Bacillus subtilis QB928]
Length = 111
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ VLD++RP+L+ DGG+ L ++D +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 41 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALL 98
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAA 206
+E +++VL+++RP+L+ GG ELV +DE IVK+R+ G
Sbjct: 40 KEQVQEVLDKLRPFLL-RDGGDCELVDVDEGIVKLRLLGACG 80
>gi|218246615|ref|YP_002371986.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8801]
gi|218167093|gb|ACK65830.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8801]
Length = 294
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LDE I+P L DGG+V L +++G++V++ LQGACGSC SS T+KMGIE RL E++
Sbjct: 226 IQQILDEEIKPALAKDGGDVELFDVEGDLVKVILQGACGSCASSTQTLKMGIEARLRERV 285
Query: 146 -PEIVAV 151
PE+ +
Sbjct: 286 SPELTVI 292
>gi|421859298|ref|ZP_16291533.1| thioredoxin-like protein [Paenibacillus popilliae ATCC 14706]
gi|410831182|dbj|GAC41970.1| thioredoxin-like protein [Paenibacillus popilliae ATCC 14706]
Length = 81
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 90 VLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV 149
VLD++RP+L DGG+V L +++ +V+L+L GACGSCPSS +T+K GIER L+E++ I
Sbjct: 16 VLDKLRPFLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEEVEGIT 75
Query: 150 AVESV 154
V V
Sbjct: 76 EVVQV 80
Score = 37.0 bits (84), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 157 EETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVR 212
E+T + +E +E VL+++RP+L GG +ELV +++ IVK+R+ G + +T++
Sbjct: 3 EQTQNSMYDEVLE-VLDKLRPFL-QRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLK 60
Query: 213 VAVTQKLREKIPAIAAV 229
+ + L E++ I V
Sbjct: 61 AGIERALVEEVEGITEV 77
>gi|406907827|gb|EKD48534.1| Nitrogen-fixing NifU protein [uncultured bacterium]
Length = 100
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 84 AENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
A+ IE LDEIRPYL S GG++ + + + + +K +GAC CP S+ T+K+G+E ++ E
Sbjct: 19 AQTIEKALDEIRPYLHSHGGDITVMSVQDSKLYVKFKGACVGCPISLYTLKLGVEEKIKE 78
Query: 144 KIPEIVAVESV-ADEETGLEL 163
+IPEI V +V D E G +
Sbjct: 79 RIPEIKQVIAVEHDHEVGADF 99
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 8/78 (10%)
Query: 159 TGLELNE---ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAG----VMTV 211
G +L E + IEK L+EIRPYL + GG + ++++ + + V+ G G + T+
Sbjct: 10 NGYKLKETLAQTIEKALDEIRPYL-HSHGGDITVMSVQDSKLYVKFKGACVGCPISLYTL 68
Query: 212 RVAVTQKLREKIPAIAAV 229
++ V +K++E+IP I V
Sbjct: 69 KLGVEEKIKERIPEIKQV 86
>gi|402817925|ref|ZP_10867511.1| NifU-like protein [Paenibacillus alvei DSM 29]
gi|402504437|gb|EJW14966.1| NifU-like protein [Paenibacillus alvei DSM 29]
Length = 81
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 90 VLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV 149
VLD++RP+L DGG+V L +++ +V+L+L GACGSCPSS +T+K GIER L+E++ I
Sbjct: 16 VLDKLRPFLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEEVEGIT 75
Query: 150 AVESV 154
V V
Sbjct: 76 EVVQV 80
>gi|154687334|ref|YP_001422495.1| hypothetical protein RBAM_029330 [Bacillus amyloliquefaciens FZB42]
gi|385266112|ref|ZP_10044199.1| NifU-like domain-containing protein [Bacillus sp. 5B6]
gi|387899822|ref|YP_006330118.1| thioredoxin-like protein [Bacillus amyloliquefaciens Y2]
gi|154353185|gb|ABS75264.1| YutI [Bacillus amyloliquefaciens FZB42]
gi|385150608|gb|EIF14545.1| NifU-like domain-containing protein [Bacillus sp. 5B6]
gi|387173932|gb|AFJ63393.1| thioredoxin-like protein [Bacillus amyloliquefaciens Y2]
Length = 86
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ VLD++RP+L+ DGG+ L ++D +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 16 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALL 73
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAA 206
+E +++VL+++RP+L+ GG ELV +DE IVK+R+ G
Sbjct: 15 KEQVQEVLDKLRPFLL-RDGGDCELVDVDEGIVKLRLLGACG 55
>gi|383449496|ref|YP_005356217.1| NifU-like protein [Flavobacterium indicum GPTSA100-9]
gi|380501118|emb|CCG52160.1| NifU-like protein [Flavobacterium indicum GPTSA100-9]
Length = 79
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
N+E LDEIRP+L SDGGN++L EI + V+++L+GAC SC S+ TMK G+E + +
Sbjct: 9 NVEKALDEIRPFLNSDGGNISLVEIIEDKHVKVRLEGACTSCSLSISTMKAGVETTIKKY 68
Query: 145 IPEIVAVESVA 155
+P+I VE++A
Sbjct: 69 VPQIETVENIA 79
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 167 NIEKVLEEIRPYLVGAAGGSLELV-TIDEPIVKVRITGPAA----GVMTVRVAVTQKLRE 221
N+EK L+EIRP+L + GG++ LV I++ VKVR+ G + T++ V +++
Sbjct: 9 NVEKALDEIRPFL-NSDGGNISLVEIIEDKHVKVRLEGACTSCSLSISTMKAGVETTIKK 67
Query: 222 KIPAIAAVQ 230
+P I V+
Sbjct: 68 YVPQIETVE 76
>gi|257059658|ref|YP_003137546.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8802]
gi|256589824|gb|ACV00711.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 8802]
Length = 294
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LDE I+P L DGG+V L +++G++V++ LQGACGSC SS T+KMGIE RL E++
Sbjct: 226 IQQILDEEIKPALAKDGGDVELFDVEGDLVKVILQGACGSCASSTQTLKMGIEARLRERV 285
Query: 146 -PEIVAV 151
PE+ +
Sbjct: 286 SPELTVI 292
>gi|2183204|gb|AAC33371.1| NifU [Cyanothece sp. PCC 8801]
Length = 294
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LDE I+P L DGG+V L +++G++V++ LQGACGSC SS T+KMGIE RL E++
Sbjct: 226 IQQILDEEIKPALAKDGGDVELFDVEGDLVKVILQGACGSCASSTQTLKMGIEARLRERV 285
Query: 146 -PEIVAV 151
PE+ +
Sbjct: 286 SPELTVI 292
>gi|89068101|ref|ZP_01155518.1| Nitrogen-fixing NifU [Oceanicola granulosus HTCC2516]
gi|89046340|gb|EAR52397.1| Nitrogen-fixing NifU [Oceanicola granulosus HTCC2516]
Length = 186
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 145 IPEIVAVESVA 155
IPE+V V VA
Sbjct: 175 IPEVVEVRPVA 185
>gi|411120957|ref|ZP_11393329.1| Modular FeS cluster scaffolding protein NifU [Oscillatoriales
cyanobacterium JSC-12]
gi|410709626|gb|EKQ67141.1| Modular FeS cluster scaffolding protein NifU [Oscillatoriales
cyanobacterium JSC-12]
Length = 293
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 53/68 (77%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
I++VL E+RP L++DGG+V L++I+G+VV++ L+GACGSC SS T+K IE R+ E++
Sbjct: 225 IQAVLHEVRPVLLADGGDVELYDIEGDVVKVVLKGACGSCESSTATLKNAIEVRIKERVS 284
Query: 147 EIVAVESV 154
+ VE+V
Sbjct: 285 PSLVVEAV 292
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 20/119 (16%)
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNE--------ENI 168
+K G CGSC + + IE+ I A E GL N I
Sbjct: 173 VKAGGGCGSCLVDIEDILFAIEQEKEATAARITA-------EVGLNPNRPLTTVQKIALI 225
Query: 169 EKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLREKI 223
+ VL E+RP L+ A GG +EL I+ +VKV + G + T++ A+ +++E++
Sbjct: 226 QAVLHEVRPVLL-ADGGDVELYDIEGDVVKVVLKGACGSCESSTATLKNAIEVRIKERV 283
>gi|328954876|ref|YP_004372209.1| nitrogen-fixing NifU domain-containing protein [Coriobacterium
glomerans PW2]
gi|328455200|gb|AEB06394.1| nitrogen-fixing NifU domain protein [Coriobacterium glomerans PW2]
Length = 92
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 9/100 (9%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIE 138
+ + E+++ VLDEIRP L +DGG++ +D + VV+L+LQGAC CP S MT+ MGIE
Sbjct: 1 MAVNEEHLKRVLDEIRPNLQADGGDLTFVGVDDDGVVQLELQGACAGCPMSSMTLSMGIE 60
Query: 139 RRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPY 178
R L E + + VE+V D TG ++++ +E P+
Sbjct: 61 RVLKEHVAGVTRVEAVND--TG------GMDELYDEYAPF 92
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAGV----MTVRVAV 215
+ +NEE++++VL+EIRP L A GG L V +D+ +V++ + G AG MT+ + +
Sbjct: 1 MAVNEEHLKRVLDEIRPNLQ-ADGGDLTFVGVDDDGVVQLELQGACAGCPMSSMTLSMGI 59
Query: 216 TQKLREKIPAIAAVQ 230
+ L+E + + V+
Sbjct: 60 ERVLKEHVAGVTRVE 74
>gi|254510570|ref|ZP_05122637.1| NifU domain protein [Rhodobacteraceae bacterium KLH11]
gi|221534281|gb|EEE37269.1| NifU domain protein [Rhodobacteraceae bacterium KLH11]
Length = 187
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 85 ENIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I+ +LD +RP + DGG++ H D +V L +QGAC CPSS +T+KMGIE L
Sbjct: 115 DQIKDLLDSRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTITLKMGIENLLRH 174
Query: 144 KIPEIVAVESVA 155
IPE+V V VA
Sbjct: 175 YIPEVVEVRPVA 186
>gi|343086121|ref|YP_004775416.1| nitrogen-fixing NifU domain-containing protein [Cyclobacterium
marinum DSM 745]
gi|342354655|gb|AEL27185.1| nitrogen-fixing NifU domain-containing protein [Cyclobacterium
marinum DSM 745]
Length = 82
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ IE LD IRPYL +DGGNV + ++ + V++L+L GAC SCP S MT+K G+E + +
Sbjct: 7 DQIEKALDTIRPYLEADGGNVKIVDLSEDMVLQLELTGACSSCPMSTMTLKAGVEEAIKK 66
Query: 144 KIPEIVAVESV 154
IPEI+ VE+V
Sbjct: 67 AIPEIIRVEAV 77
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIV-KVRITGPAA----GVMTVRVAV 215
L+ ++ IEK L+ IRPYL A GG++++V + E +V ++ +TG + MT++ V
Sbjct: 2 LDQYKDQIEKALDTIRPYL-EADGGNVKIVDLSEDMVLQLELTGACSSCPMSTMTLKAGV 60
Query: 216 TQKLREKIPAIAAVQ 230
+ +++ IP I V+
Sbjct: 61 EEAIKKAIPEIIRVE 75
>gi|407787731|ref|ZP_11134870.1| hypothetical protein B30_16838 [Celeribacter baekdonensis B30]
gi|407199010|gb|EKE69034.1| hypothetical protein B30_16838 [Celeribacter baekdonensis B30]
Length = 187
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 74 PDSAIELPLTAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMT 132
PDS I + I+ +LD +RP + DGG++ H D +V L +QGAC CPSS +T
Sbjct: 109 PDSEI-----VKQIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLT 163
Query: 133 MKMGIERRLMEKIPEIVAVESVA 155
+KMGIE L IPE++ V VA
Sbjct: 164 LKMGIENLLRHYIPEVLEVRPVA 186
>gi|195447128|ref|XP_002071076.1| GK25604 [Drosophila willistoni]
gi|263505026|sp|B4NE93.1|NFU1_DROWI RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194167161|gb|EDW82062.1| GK25604 [Drosophila willistoni]
Length = 289
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ D VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 183 IKELLDTRIRPTVQEDGGDIVFMSYDNGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 242
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVLEE 174
PE+ +VE V DE + E E E+ L++
Sbjct: 243 PEVESVEQVFDEADKMADKEFERFERNLKQ 272
>gi|328953813|ref|YP_004371147.1| nitrogen-fixing NifU domain-containing protein [Desulfobacca
acetoxidans DSM 11109]
gi|328454137|gb|AEB09966.1| nitrogen-fixing NifU domain-containing protein [Desulfobacca
acetoxidans DSM 11109]
Length = 72
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E +E L +IRP L DGG+V L E++ VV++KL GAC CP S MT+K GIER L ++
Sbjct: 3 EAVEKSLAKIRPMLQRDGGDVELVEVEHGVVKVKLTGACKGCPMSQMTLKNGIERLLKQE 62
Query: 145 IPEIVAVESV 154
+P IV+VESV
Sbjct: 63 VPGIVSVESV 72
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGV----MTVRVAVTQKLR 220
+E +EK L +IRP L GG +ELV ++ +VKV++TG G MT++ + + L+
Sbjct: 2 KEAVEKSLAKIRPML-QRDGGDVELVEVEHGVVKVKLTGACKGCPMSQMTLKNGIERLLK 60
Query: 221 EKIPAIAAVQ 230
+++P I +V+
Sbjct: 61 QEVPGIVSVE 70
>gi|225711844|gb|ACO11768.1| NFU1 iron-sulfur cluster scaffold homolog [Lepeophtheirus salmonis]
Length = 238
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 88/159 (55%), Gaps = 22/159 (13%)
Query: 33 FFG-ERVSLTR-------WR--NPVCHSSCRLLLIRKRGAARRNVIKAVATPDSAIELPL 82
FFG + +++T+ W+ P+ +++ I A+ ++ A P S E+
Sbjct: 85 FFGPDFITITKEEEVNAEWKLMKPLIYAT-----IMDFFASGLPIVNEDAKPHSDTEIHE 139
Query: 83 TAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
++ I+ +LD IRP + DGG++ D VV+LK+QG+C SCPSS++T+K G+
Sbjct: 140 DDDDTVAMIKELLDSRIRPTVQEDGGDIVFMGFDDGVVKLKMQGSCTSCPSSIVTLKNGV 199
Query: 138 ERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIR 176
+ L IPE++ VE + DE E+++ +K+ E+++
Sbjct: 200 QNMLQFYIPEVLEVEQIFDEVD--EVSKSQFKKLEEKLK 236
>gi|390348426|ref|XP_798698.3| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Strongylocentrotus purpuratus]
Length = 209
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LKLQGAC SCPSS++T+K G++ L +
Sbjct: 117 IKELLDTRIRPTVQEDGGDIVYMGFEEGVVKLKLQGACTSCPSSIVTLKHGVQNMLQFYV 176
Query: 146 PEIVAVESVADEETGLELNEENIEKVLEEI 175
PE+++VE+V DE +++ E ++K+ E+I
Sbjct: 177 PEVLSVEAVEDERD--DISNEQLKKLEEKI 204
>gi|89053356|ref|YP_508807.1| nitrogen-fixing NifU-like protein [Jannaschia sp. CCS1]
gi|88862905|gb|ABD53782.1| nitrogen-fixing NifU-like protein [Jannaschia sp. CCS1]
Length = 187
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+S+LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKSLLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESV 154
IPE+V V V
Sbjct: 176 IPEVVEVRPV 185
>gi|393218959|gb|EJD04447.1| HIRA-interacting protein 5 [Fomitiporia mediterranea MF3/22]
Length = 298
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 94 IRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
+RP ++ DGG++ E D +V+LKL+G+C C SS +T+K GIER +M IPE+ VE
Sbjct: 197 VRPAIMEDGGDIEYCEFSDDGIVKLKLKGSCRGCSSSTVTLKTGIERMMMHYIPEVKGVE 256
Query: 153 SVADEETGLELNE-ENIEKVLE 173
V DEE + L E + +EK L
Sbjct: 257 QVVDEEEKIALEEFQKLEKRLH 278
>gi|357009423|ref|ZP_09074422.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus elgii
B69]
Length = 82
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 90 VLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV 149
VLD++RP+L DGG+V L +++ +V+L+L GACGSCPSS +T+K GIER L+E++ +
Sbjct: 17 VLDKLRPFLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALLEEVEGVQ 76
Query: 150 AVESV 154
V V
Sbjct: 77 EVMQV 81
>gi|300867915|ref|ZP_07112555.1| Fe-S cluster assembly protein NifU [Oscillatoria sp. PCC 6506]
gi|300334052|emb|CBN57731.1| Fe-S cluster assembly protein NifU [Oscillatoria sp. PCC 6506]
Length = 298
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI- 145
I+ VL+E+RP LI+DGG+V L++++G++V++ L+GACGSCPSS T+K IE L EK+
Sbjct: 231 IQKVLEEVRPLLIADGGDVELYDVEGDIVKVLLKGACGSCPSSTSTLKGLIETTLKEKVL 290
Query: 146 PEIV 149
P +V
Sbjct: 291 PSLV 294
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 117 LKLQGACGSC--PSSVMTMKMGIERRLMEKIP-EIVAVESVADEETGLELNEEN----IE 169
+K G CGSC P + ++ E+ + K+ EI + ++ L I+
Sbjct: 173 IKAGGGCGSCLYPIDDLIAEVFKEKANITKVATEIAFAKETKNQSPTQPLTPIQKISLIQ 232
Query: 170 KVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLREKIPA 225
KVLEE+RP L+ A GG +EL ++ IVKV + G + T++ + L+EK+
Sbjct: 233 KVLEEVRPLLI-ADGGDVELYDVEGDIVKVLLKGACGSCPSSTSTLKGLIETTLKEKVLP 291
Query: 226 IAAVQLL 232
VQ L
Sbjct: 292 SLVVQAL 298
>gi|86138949|ref|ZP_01057520.1| nifU domain protein [Roseobacter sp. MED193]
gi|85824180|gb|EAQ44384.1| nifU domain protein [Roseobacter sp. MED193]
Length = 187
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 85 ENIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 115 DQIKDLLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRH 174
Query: 144 KIPEIVAVESVA 155
IPE+ V VA
Sbjct: 175 YIPEVTEVRPVA 186
>gi|310815348|ref|YP_003963312.1| NifU domain-containing protein [Ketogulonicigenium vulgare Y25]
gi|385232885|ref|YP_005794227.1| NifU-like domain-containing protein [Ketogulonicigenium vulgare
WSH-001]
gi|308754083|gb|ADO42012.1| NifU domain protein [Ketogulonicigenium vulgare Y25]
gi|343461796|gb|AEM40231.1| NifU-like protein domain protein [Ketogulonicigenium vulgare
WSH-001]
Length = 185
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E I+ +LD +RP + DGG++ H D VV L +QG+C CPSS +T+KMGIE L
Sbjct: 113 EQIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGSCAGCPSSTLTLKMGIENLLRH 172
Query: 144 KIPEIVAVESVA 155
IPE++ V VA
Sbjct: 173 YIPEVLEVRPVA 184
>gi|239828215|ref|YP_002950839.1| nitrogen-fixing NifU domain-containing protein [Geobacillus sp.
WCH70]
gi|239808508|gb|ACS25573.1| nitrogen-fixing NifU domain protein [Geobacillus sp. WCH70]
Length = 78
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ VLD++RP+L+ DGG+ L +++ VV+L+L GACGSCPSS +T+K GIER L+
Sbjct: 8 EQVQEVLDKLRPFLLRDGGDCELIDVEDGVVKLRLLGACGSCPSSTITLKAGIERALL 65
>gi|376296445|ref|YP_005167675.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
desulfuricans ND132]
gi|323459006|gb|EGB14871.1| nitrogen-fixing NifU domain protein [Desulfovibrio desulfuricans
ND132]
Length = 73
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ +E+VLD++RP L DGG+V L E+ D +V+++L GAC CP S MT+K GIER +++
Sbjct: 3 KKVEAVLDKVRPMLQGDGGDVELVEVTDNGIVKVRLTGACKGCPMSQMTLKNGIERIILK 62
Query: 144 KIPEIVAVESV 154
+IPE+ VE+V
Sbjct: 63 EIPEVKGVEAV 73
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVTQKL 219
++ +E VL+++RP L G GG +ELV + D IVKVR+TG G MT++ + + +
Sbjct: 2 QKKVEAVLDKVRPMLQGD-GGDVELVEVTDNGIVKVRLTGACKGCPMSQMTLKNGIERII 60
Query: 220 REKIPAIAAVQ 230
++IP + V+
Sbjct: 61 LKEIPEVKGVE 71
>gi|254453730|ref|ZP_05067167.1| NifU domain protein [Octadecabacter arcticus 238]
gi|198268136|gb|EDY92406.1| NifU domain protein [Octadecabacter arcticus 238]
Length = 186
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 145 IPEIVAVESVA 155
IPE+V V VA
Sbjct: 175 IPEVVEVRPVA 185
>gi|126725029|ref|ZP_01740872.1| nifU domain protein [Rhodobacterales bacterium HTCC2150]
gi|126706193|gb|EBA05283.1| nifU domain protein [Rhodobacteraceae bacterium HTCC2150]
Length = 187
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D +V L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+V V VA
Sbjct: 176 IPEVVEVRPVA 186
>gi|268317872|ref|YP_003291591.1| nitrogen-fixing NifU domain-containing protein [Rhodothermus
marinus DSM 4252]
gi|345304151|ref|YP_004826053.1| nitrogen-fixing NifU domain-containing protein [Rhodothermus
marinus SG0.5JP17-172]
gi|262335406|gb|ACY49203.1| nitrogen-fixing NifU domain protein [Rhodothermus marinus DSM 4252]
gi|345113384|gb|AEN74216.1| nitrogen-fixing NifU domain-containing protein [Rhodothermus
marinus SG0.5JP17-172]
Length = 96
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
IE LD IRPYL++DGG+V L + + VV L+L GACG+CP S+MT++ GIE+ L +
Sbjct: 24 IEEALDMIRPYLMTDGGSVRLLNVTEDYVVELELLGACGTCPMSLMTLRAGIEQVLKRAV 83
Query: 146 PEIVAVESV 154
PEI VE+V
Sbjct: 84 PEITRVEAV 92
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 168 IEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAA----GVMTVRVAVTQKLREK 222
IE+ L+ IRPYL+ GGS+ L+ + E +V++ + G +MT+R + Q L+
Sbjct: 24 IEEALDMIRPYLM-TDGGSVRLLNVTEDYVVELELLGACGTCPMSLMTLRAGIEQVLKRA 82
Query: 223 IPAIAAVQ 230
+P I V+
Sbjct: 83 VPEITRVE 90
>gi|346994778|ref|ZP_08862850.1| NifU domain-containing protein [Ruegeria sp. TW15]
Length = 187
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 85 ENIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
I+ +LD +RP + DGG++ H D +V L +QGAC CPSS +T+KMGIE L
Sbjct: 115 HQIKDLLDSRVRPAVAQDGGDITFHGFDKGIVYLHMQGACAGCPSSTITLKMGIENLLRH 174
Query: 144 KIPEIVAVESVA 155
IPE++ V VA
Sbjct: 175 YIPEVIEVRPVA 186
>gi|56695297|ref|YP_165645.1| NifU domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56677034|gb|AAV93700.1| nifU domain protein [Ruegeria pomeroyi DSS-3]
Length = 187
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 86 NIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+++LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKALLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 176 IPEVTEVRPVA 186
>gi|319650406|ref|ZP_08004549.1| nitrogen-fixing NifU-like protein [Bacillus sp. 2_A_57_CT2]
gi|317397967|gb|EFV78662.1| nitrogen-fixing NifU-like protein [Bacillus sp. 2_A_57_CT2]
Length = 79
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ VLD++RP+L+ DGG+ L +++ +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 9 EQVQEVLDKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERALL 66
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAA 206
E +++VL+++RP+L+ GG ELV +++ IVK+R+ G
Sbjct: 9 EQVQEVLDKLRPFLL-RDGGDCELVDVEDGIVKLRLLGACG 48
>gi|403669422|ref|ZP_10934634.1| hypothetical protein KJC8E_11385 [Kurthia sp. JC8E]
Length = 73
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ VLD++RP+L+ DGG+ L +++ VV+L+L GACGSCPSS +T+K GIER L+
Sbjct: 3 EQVQEVLDKLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGIERALL 60
>gi|21430120|gb|AAM50738.1| GM32035p [Drosophila melanogaster]
Length = 104
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 7/97 (7%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ +G VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 3 IKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 62
Query: 146 PEIVAVESVADE-----ETGLELNEENIEKVLEEIRP 177
PE+ +VE V DE E+ E E+N+ K L++ P
Sbjct: 63 PEVESVEQVFDEADRMIESEFERFEKNL-KTLKQQEP 98
>gi|261420397|ref|YP_003254079.1| nitrogen-fixing NifU domain-containing protein [Geobacillus sp.
Y412MC61]
gi|297528899|ref|YP_003670174.1| nitrogen-fixing NifU domain-containing protein [Geobacillus sp.
C56-T3]
gi|319768064|ref|YP_004133565.1| nitrogen-fixing NifU domain-containing protein [Geobacillus sp.
Y412MC52]
gi|375010084|ref|YP_004983717.1| nitrogen fixation protein yutI [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|448239224|ref|YP_007403282.1| YutI-like protein [Geobacillus sp. GHH01]
gi|261376854|gb|ACX79597.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y412MC61]
gi|297252151|gb|ADI25597.1| nitrogen-fixing NifU domain protein [Geobacillus sp. C56-T3]
gi|317112930|gb|ADU95422.1| nitrogen-fixing NifU domain protein [Geobacillus sp. Y412MC52]
gi|359288933|gb|AEV20617.1| nitrogen fixation protein yutI [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445208066|gb|AGE23531.1| YutI-like protein [Geobacillus sp. GHH01]
Length = 78
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ VLD++RP+L+ DGG+ L +++ VV+L+L GACGSCPSS +T+K GIER L
Sbjct: 8 EQVQEVLDKLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGIERALF 65
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAA 206
+E +++VL+++RP+L+ GG ELV +++ +VK+R+ G
Sbjct: 7 KEQVQEVLDKLRPFLL-RDGGDCELVDVEDGVVKLRLLGACG 47
>gi|390454330|ref|ZP_10239858.1| thioredoxin-like protein [Paenibacillus peoriae KCTC 3763]
Length = 73
Score = 73.9 bits (180), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + VLD++RP+L DGG+V L +++ +V+LKL GACGSCPSS +T+K GIER L+E+
Sbjct: 3 DEVADVLDKLRPFLQRDGGDVELVDVEDGIVKLKLVGACGSCPSSTITLKAGIERALLEE 62
Query: 145 IPEIVAVESV 154
+ + V V
Sbjct: 63 VDGVQEVVQV 72
>gi|56421496|ref|YP_148814.1| nitrogen fixation NifU protein [Geobacillus kaustophilus HTA426]
gi|138896548|ref|YP_001127001.1| nitrogen fixation protein NifU [Geobacillus thermodenitrificans
NG80-2]
gi|56381338|dbj|BAD77246.1| nitrogen fixation protein (NifU protein) [Geobacillus kaustophilus
HTA426]
gi|134268061|gb|ABO68256.1| Nitrogen fixation protein NifU [Geobacillus thermodenitrificans
NG80-2]
Length = 80
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ VLD++RP+L+ DGG+ L +++ VV+L+L GACGSCPSS +T+K GIER L
Sbjct: 10 EQVQEVLDKLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGIERALF 67
Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAA 206
+E +++VL+++RP+L+ GG ELV +++ +VK+R+ G
Sbjct: 9 KEQVQEVLDKLRPFLL-RDGGDCELVDVEDGVVKLRLLGACG 49
>gi|17946069|gb|AAL49077.1| RE53788p [Drosophila melanogaster]
Length = 134
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 7/97 (7%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ +G VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 33 IKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 92
Query: 146 PEIVAVESVADE-----ETGLELNEENIEKVLEEIRP 177
PE+ +VE V DE E+ E E+N+ K L++ P
Sbjct: 93 PEVESVEQVFDEADRMIESEFERFEKNL-KTLKQQEP 128
>gi|404447730|ref|ZP_11012724.1| thioredoxin-like protein [Indibacter alkaliphilus LW1]
gi|403766316|gb|EJZ27188.1| thioredoxin-like protein [Indibacter alkaliphilus LW1]
Length = 82
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ +E LD IRPYL +DGGNV + EI V++L+L G C SCP S MT+K G+E +
Sbjct: 7 DRVEKALDTIRPYLEADGGNVRIVEITKEKVLKLELTGTCSSCPMSTMTLKAGVEEAIKR 66
Query: 144 KIPEIVAVESV 154
IPEI+ VE+V
Sbjct: 67 DIPEIIKVEAV 77
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKLR 220
+ +EK L+ IRPYL A GG++ +V I E ++K+ +TG + MT++ V + ++
Sbjct: 7 DRVEKALDTIRPYL-EADGGNVRIVEITKEKVLKLELTGTCSSCPMSTMTLKAGVEEAIK 65
Query: 221 EKIPAIAAVQ 230
IP I V+
Sbjct: 66 RDIPEIIKVE 75
>gi|313673639|ref|YP_004051750.1| nitrogen-fixing nifu domain-containing protein [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940395|gb|ADR19587.1| nitrogen-fixing NifU domain protein [Calditerrivibrio nitroreducens
DSM 19672]
Length = 75
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E VL ++RP L +DGG+V L + D VV+++L GACGSCP S MT+K GIE RL +
Sbjct: 5 ERVEEVLKKVRPALQADGGDVELLGVTDDGVVKVQLTGACGSCPFSTMTLKHGIEMRLKD 64
Query: 144 KIPEIVAVES 153
+IPEI V S
Sbjct: 65 EIPEIKEVVS 74
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKL 219
+E +E+VL+++RP L A GG +EL+ + D+ +VKV++TG MT++ + +L
Sbjct: 4 KERVEEVLKKVRPAL-QADGGDVELLGVTDDGVVKVQLTGACGSCPFSTMTLKHGIEMRL 62
Query: 220 REKIPAIAAV 229
+++IP I V
Sbjct: 63 KDEIPEIKEV 72
>gi|126740480|ref|ZP_01756167.1| nifU domain protein [Roseobacter sp. SK209-2-6]
gi|126718281|gb|EBA14996.1| nifU domain protein [Roseobacter sp. SK209-2-6]
Length = 187
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L I
Sbjct: 117 IKDLLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYI 176
Query: 146 PEIVAVESVA 155
PE+ V VA
Sbjct: 177 PEVTEVRPVA 186
>gi|354491749|ref|XP_003508017.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Cricetulus griseus]
Length = 251
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +VRLKLQG+C SCPSS++T+K GI+ L I
Sbjct: 170 IKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYI 229
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 230 PEVEGVEQVMDDES 243
>gi|159045379|ref|YP_001534173.1| hypothetical protein Dshi_2839 [Dinoroseobacter shibae DFL 12]
gi|157913139|gb|ABV94572.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 187
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 74 PDSAIELPLTAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMT 132
PDS I I+ +LD +RP + DGG++ H D +V L +QGAC CPSS +T
Sbjct: 109 PDSEI-----VGQIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLT 163
Query: 133 MKMGIERRLMEKIPEIVAVESVA 155
+KMGIE L IPE++ V VA
Sbjct: 164 LKMGIENLLRHYIPEVLEVRPVA 186
>gi|119496847|ref|XP_001265197.1| NifU-related protein [Neosartorya fischeri NRRL 181]
gi|119413359|gb|EAW23300.1| NifU-related protein [Neosartorya fischeri NRRL 181]
Length = 326
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ L + +V+LKL+GAC +C SS +T+K GIE LM I E+ VE
Sbjct: 225 IRPAIQEDGGDIELRGFENGIVKLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVQGVEQ 284
Query: 154 VADEETGLELNE--ENIEKVLEEIRPYLVGAAGGSLELVT 191
V DEE + ++E + EK+ ++ P + GG L T
Sbjct: 285 VLDEEEEISMHEFAKFEEKLRQQKGPQATASTGGKGTLDT 324
>gi|70990736|ref|XP_750217.1| NifU-related protein [Aspergillus fumigatus Af293]
gi|66847849|gb|EAL88179.1| NifU-related protein [Aspergillus fumigatus Af293]
gi|159130693|gb|EDP55806.1| NifU-related protein [Aspergillus fumigatus A1163]
Length = 326
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ L + +V+LKL+GAC +C SS +T+K GIE LM I E+ VE
Sbjct: 225 IRPAIQEDGGDIELRGFENGIVKLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVQGVEQ 284
Query: 154 VADEETGLELNE--ENIEKVLEEIRPYLVGAAGGSLELVT 191
V DEE + ++E + EK+ ++ P + GG L T
Sbjct: 285 VLDEEEEISMHEFAKFEEKLRQQKGPQATASTGGKGTLDT 324
>gi|336114852|ref|YP_004569619.1| nitrogen-fixing NifU domain-containing protein [Bacillus coagulans
2-6]
gi|335368282|gb|AEH54233.1| nitrogen-fixing NifU domain protein [Bacillus coagulans 2-6]
Length = 78
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 45/58 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ VLD++RP+L+ DGG+ L +++ +V+L+L GACGSCPSS +T+K GIER L
Sbjct: 8 EQVQEVLDKLRPFLLRDGGDCELIDVEDGIVKLRLLGACGSCPSSTITLKAGIERALF 65
>gi|84515908|ref|ZP_01003269.1| nifU domain protein [Loktanella vestfoldensis SKA53]
gi|84510350|gb|EAQ06806.1| nifU domain protein [Loktanella vestfoldensis SKA53]
Length = 187
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D +V L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE++ V VA
Sbjct: 176 IPEVIEVRPVA 186
>gi|195169040|ref|XP_002025336.1| GL13432 [Drosophila persimilis]
gi|263504975|sp|B4H303.1|NFU1_DROPE RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194108792|gb|EDW30835.1| GL13432 [Drosophila persimilis]
Length = 282
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 178 IKELLDTRIRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 237
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVLEEIRP--YLVGAAGG 185
PE+ +VE V D+ + E E EK L++ P VG GG
Sbjct: 238 PEVESVEQVFDDADRMADKEFERFEKNLKQKEPAGAPVGIGGG 280
>gi|121702857|ref|XP_001269693.1| NifU-related protein [Aspergillus clavatus NRRL 1]
gi|119397836|gb|EAW08267.1| NifU-related protein [Aspergillus clavatus NRRL 1]
Length = 320
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ L + +V+LKL+GAC +C SS +T+K GIE LM I E+ VE
Sbjct: 219 IRPAIQEDGGDIELRGFENGIVKLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVQGVEQ 278
Query: 154 VADEETGLELNE--ENIEKVLEEIRPYLVGAAGG 185
V DEE + ++E + EK+ ++ P ++GG
Sbjct: 279 VLDEEEEISMHEFAKFEEKLRQQKGPQATASSGG 312
>gi|340357770|ref|ZP_08680378.1| NifU family protein [Sporosarcina newyorkensis 2681]
gi|339616649|gb|EGQ21292.1| NifU family protein [Sporosarcina newyorkensis 2681]
Length = 79
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ VLD++RP+L+ DGG+ L +ID +V+L+L GACG+CPSS +T+K GIER L+
Sbjct: 9 EPVKEVLDKLRPFLLRDGGDCELVDIDEGIVKLRLLGACGTCPSSTITLKAGIERALL 66
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAA 206
E +++VL+++RP+L+ GG ELV IDE IVK+R+ G
Sbjct: 9 EPVKEVLDKLRPFLL-RDGGDCELVDIDEGIVKLRLLGACG 48
>gi|99078069|ref|YP_611327.1| nitrogen-fixing NifU-like [Ruegeria sp. TM1040]
gi|99035207|gb|ABF62065.1| nitrogen-fixing NifU-like protein [Ruegeria sp. TM1040]
Length = 187
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 176 IPEVTEVRPVA 186
>gi|348530364|ref|XP_003452681.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Oreochromis niloticus]
Length = 261
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + VV+LKLQG+C SCPSS++T+K GI+ L +
Sbjct: 183 IKELLDTRIRPTVQEDGGDVLYRGFEDGVVKLKLQGSCTSCPSSIVTLKSGIQNMLQFYV 242
Query: 146 PEIVAVESVADEE 158
PE+ +VE V DEE
Sbjct: 243 PEVESVEQVKDEE 255
>gi|429206970|ref|ZP_19198230.1| nitrogen-fixing NifU domain protein [Rhodobacter sp. AKP1]
gi|428189965|gb|EKX58517.1| nitrogen-fixing NifU domain protein [Rhodobacter sp. AKP1]
Length = 186
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D +V L +QGAC CPSS +T+KMGIE L
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 145 IPEIVAVESVA 155
IPE++ V VA
Sbjct: 175 IPEVLEVRPVA 185
>gi|126461658|ref|YP_001042772.1| NifU domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
gi|221638629|ref|YP_002524891.1| nitrogen-fixing NifU domain-containing protein [Rhodobacter
sphaeroides KD131]
gi|126103322|gb|ABN76000.1| nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides ATCC
17029]
gi|221159410|gb|ACM00390.1| Nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides KD131]
Length = 186
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D +V L +QGAC CPSS +T+KMGIE L
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 145 IPEIVAVESVA 155
IPE++ V VA
Sbjct: 175 IPEVLEVRPVA 185
>gi|259415063|ref|ZP_05738985.1| NifU domain protein [Silicibacter sp. TrichCH4B]
gi|259348973|gb|EEW60727.1| NifU domain protein [Silicibacter sp. TrichCH4B]
Length = 187
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 176 IPEVTEVRPVA 186
>gi|433447060|ref|ZP_20410767.1| thioredoxin-like protein [Anoxybacillus flavithermus TNO-09.006]
gi|432000118|gb|ELK21022.1| thioredoxin-like protein [Anoxybacillus flavithermus TNO-09.006]
Length = 80
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
+ ++ VLD++RP+L+ DGG+ L +++ VV+L+L GACGSCPSS +T+K GIER L+
Sbjct: 10 QQVQEVLDKLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGIERALL 67
>gi|212640233|ref|YP_002316753.1| thioredoxin-like protein [Anoxybacillus flavithermus WK1]
gi|212561713|gb|ACJ34768.1| Thioredoxin-like protein [Anoxybacillus flavithermus WK1]
Length = 80
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
+ ++ VLD++RP+L+ DGG+ L +++ VV+L+L GACGSCPSS +T+K GIER L+
Sbjct: 10 QQVQEVLDKLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGIERALL 67
>gi|399991613|ref|YP_006571853.1| nitrogen fixation protein nifU-like protein [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|400753252|ref|YP_006561620.1| nitrogen fixation protein nifU-like protein [Phaeobacter
gallaeciensis 2.10]
gi|398652405|gb|AFO86375.1| nitrogen fixation protein nifU-like protein [Phaeobacter
gallaeciensis 2.10]
gi|398656168|gb|AFO90134.1| nitrogen fixation protein nifU-like protein [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 187
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 176 IPEVTEVRPVA 186
>gi|291287157|ref|YP_003503973.1| nitrogen-fixing NifU domain-containing protein [Denitrovibrio
acetiphilus DSM 12809]
gi|290884317|gb|ADD68017.1| nitrogen-fixing NifU domain protein [Denitrovibrio acetiphilus DSM
12809]
Length = 75
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ +E VLD++RP L +DGG++ L ++ + +V+++L GACGSCP S MT+K G+E RL +
Sbjct: 5 QRVEEVLDQVRPTLQADGGDIELLDVSEDGIVKVQLTGACGSCPFSTMTLKHGVEARLKD 64
Query: 144 KIPEIVAVESV 154
IPE+ V S+
Sbjct: 65 MIPEVKEVLSI 75
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAA----GVMTVRVAVTQKL 219
++ +E+VL+++RP L A GG +EL+ + E IVKV++TG MT++ V +L
Sbjct: 4 KQRVEEVLDQVRPTL-QADGGDIELLDVSEDGIVKVQLTGACGSCPFSTMTLKHGVEARL 62
Query: 220 REKIPAIAAV 229
++ IP + V
Sbjct: 63 KDMIPEVKEV 72
>gi|332557651|ref|ZP_08411973.1| Nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides WS8N]
gi|332275363|gb|EGJ20678.1| Nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides WS8N]
Length = 186
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D +V L +QGAC CPSS +T+KMGIE L
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 145 IPEIVAVESVA 155
IPE++ V VA
Sbjct: 175 IPEVLEVRPVA 185
>gi|339007303|ref|ZP_08639878.1| hypothetical protein BRLA_c10660 [Brevibacillus laterosporus LMG
15441]
gi|421872443|ref|ZP_16304061.1| nitrogen fixation protein NifU [Brevibacillus laterosporus GI-9]
gi|338776512|gb|EGP36040.1| hypothetical protein BRLA_c10660 [Brevibacillus laterosporus LMG
15441]
gi|372458416|emb|CCF13610.1| nitrogen fixation protein NifU [Brevibacillus laterosporus GI-9]
Length = 73
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 45/57 (78%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
E ++ VL+++RPYL DGG+V L +++ +V+L+L GACGSCPSS +T+K GIER L
Sbjct: 3 EQVQEVLEKLRPYLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERAL 59
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAA 206
+E +++VLE++RPYL GG +ELV +++ IVK+R+ G
Sbjct: 2 KEQVQEVLEKLRPYL-QRDGGDVELVDVEDGIVKLRLMGACG 42
>gi|282154799|ref|NP_001100076.2| NFU1 iron-sulfur cluster scaffold homolog precursor [Rattus
norvegicus]
gi|149036647|gb|EDL91265.1| histone cell cycle regulation defective interacting protein 5
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 253
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +VRLKLQG+C SCPSS++T+K GI+ L I
Sbjct: 171 IKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYI 230
Query: 146 PEIVAVESVADEE 158
PE+ VE V D+E
Sbjct: 231 PEVEGVEQVMDDE 243
>gi|84500284|ref|ZP_00998550.1| nifU domain protein [Oceanicola batsensis HTCC2597]
gi|84392218|gb|EAQ04486.1| nifU domain protein [Oceanicola batsensis HTCC2597]
Length = 187
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLYMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 176 IPEVTEVRPVA 186
>gi|157693637|ref|YP_001488099.1| iron-sulfur assembly protein [Bacillus pumilus SAFR-032]
gi|194015287|ref|ZP_03053903.1| conserved domain protein [Bacillus pumilus ATCC 7061]
gi|389574230|ref|ZP_10164296.1| hypothetical protein BAME_28650 [Bacillus sp. M 2-6]
gi|407979013|ref|ZP_11159837.1| iron-sulfur assembly protein [Bacillus sp. HYC-10]
gi|157682395|gb|ABV63539.1| possible iron-sulfur assembly protein [Bacillus pumilus SAFR-032]
gi|194012691|gb|EDW22257.1| conserved domain protein [Bacillus pumilus ATCC 7061]
gi|388426091|gb|EIL83910.1| hypothetical protein BAME_28650 [Bacillus sp. M 2-6]
gi|407414457|gb|EKF36103.1| iron-sulfur assembly protein [Bacillus sp. HYC-10]
Length = 78
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
+ ++ VLD++RP+L+ DGG+ L +I+ +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 8 DQVQEVLDKLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGIERALL 65
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAA 206
++ +++VL+++RP+L+ GG ELV I++ IVK+R+ G
Sbjct: 7 KDQVQEVLDKLRPFLL-RDGGDCELVDIEDGIVKLRLLGACG 47
>gi|258514732|ref|YP_003190954.1| nitrogen-fixing NifU domain-containing protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257778437|gb|ACV62331.1| nitrogen-fixing NifU domain protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 73
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ VL ++RPYL DGG+V L +I + +VR+KL+GAC CP +++T+K GIER L +
Sbjct: 3 EKVKEVLGKVRPYLQRDGGDVELVDITADGIVRVKLKGACSGCPGALITLKQGIERVLKQ 62
Query: 144 KIPEIVAVES 153
+IPE+ VE
Sbjct: 63 EIPEVKGVEQ 72
>gi|254465238|ref|ZP_05078649.1| NifU domain protein [Rhodobacterales bacterium Y4I]
gi|206686146|gb|EDZ46628.1| NifU domain protein [Rhodobacterales bacterium Y4I]
Length = 188
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 117 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 176
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 177 IPEVTEVRPVA 187
>gi|254474955|ref|ZP_05088341.1| NifU domain protein [Ruegeria sp. R11]
gi|214029198|gb|EEB70033.1| NifU domain protein [Ruegeria sp. R11]
Length = 187
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 176 IPEVTEVRPVA 186
>gi|260431494|ref|ZP_05785465.1| NifU domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415322|gb|EEX08581.1| NifU domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 187
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 176 IPEVTEVRPVA 186
>gi|403235790|ref|ZP_10914376.1| NifU-like protein [Bacillus sp. 10403023]
Length = 78
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
+ ++ VLD++RP+L+ DGG+ L +++ VV+L+L GACGSCPSS +T+K GIER L+
Sbjct: 8 DQVQEVLDKLRPFLLRDGGDCDLVDVEDGVVKLRLLGACGSCPSSTITLKAGIERALL 65
>gi|387928781|ref|ZP_10131459.1| iron-sulfur scaffold protein [Bacillus methanolicus PB1]
gi|415886944|ref|ZP_11548687.1| putative iron-sulfur scaffold protein [Bacillus methanolicus MGA3]
gi|387585595|gb|EIJ77920.1| putative iron-sulfur scaffold protein [Bacillus methanolicus MGA3]
gi|387588367|gb|EIJ80689.1| iron-sulfur scaffold protein [Bacillus methanolicus PB1]
Length = 78
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ +LD++RP+L+ DGG+ L +++ +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 8 EQVQEILDKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERALL 65
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAA 206
+E ++++L+++RP+L+ GG ELV +++ IVK+R+ G
Sbjct: 7 KEQVQEILDKLRPFLL-RDGGDCELVDVEDGIVKLRLLGACG 47
>gi|118578775|ref|YP_900025.1| NifU domain-containing protein [Pelobacter propionicus DSM 2379]
gi|118501485|gb|ABK97967.1| nitrogen-fixing NifU domain protein [Pelobacter propionicus DSM
2379]
Length = 74
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E++ VL ++RP L +DGG+V L E+ + +V+++L+GACGSCP S MT+KMGIER + E
Sbjct: 3 EDVLRVLGQVRPALQADGGDVELVEVTADGIVKVRLKGACGSCPMSTMTLKMGIERAMKE 62
Query: 144 KIPEI 148
+IP +
Sbjct: 63 QIPAV 67
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTID-EPIVKVRITGPAA----GVMTVRVAVTQKL 219
+E++ +VL ++RP L A GG +ELV + + IVKVR+ G MT+++ + + +
Sbjct: 2 KEDVLRVLGQVRPAL-QADGGDVELVEVTADGIVKVRLKGACGSCPMSTMTLKMGIERAM 60
Query: 220 REKIPAIAAV 229
+E+IPA+ V
Sbjct: 61 KEQIPAVKEV 70
>gi|126730479|ref|ZP_01746290.1| nifU domain protein [Sagittula stellata E-37]
gi|126709212|gb|EBA08267.1| nifU domain protein [Sagittula stellata E-37]
Length = 187
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 176 IPEVTEVRPVA 186
>gi|260892780|ref|YP_003238877.1| nitrogen-fixing NifU domain-containing protein [Ammonifex degensii
KC4]
gi|260864921|gb|ACX52027.1| nitrogen-fixing NifU domain protein [Ammonifex degensii KC4]
Length = 72
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E +E+ L +IRP+L DGG+V L ++ VV+++L+GACG CP +++T+K GIER L E
Sbjct: 3 EKVEAALAQIRPHLQRDGGDVELVAVEDGVVKVRLKGACGGCPMAMVTLKQGIERILKEA 62
Query: 145 IPEIVAVESV 154
+PE+ V +V
Sbjct: 63 VPEVKEVVAV 72
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAG----VMTVRVAVTQKLRE 221
E +E L +IRP+L GG +ELV +++ +VKVR+ G G ++T++ + + L+E
Sbjct: 3 EKVEAALAQIRPHL-QRDGGDVELVAVEDGVVKVRLKGACGGCPMAMVTLKQGIERILKE 61
Query: 222 KIPAIAAV 229
+P + V
Sbjct: 62 AVPEVKEV 69
>gi|342181842|emb|CCC91321.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 273
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP L SDGGNV ++D V + L+GAC SCPSS T+K GIER LM IPE+V V+
Sbjct: 185 IRPLLQSDGGNVRYIDMDDGTVFVLLEGACKSCPSSGATLKNGIERMLMHWIPEVVEVQE 244
Query: 154 VADEETGLELNEENIEK 170
+DE L ++ + K
Sbjct: 245 CSDEMASDLLAQKELRK 261
>gi|77462766|ref|YP_352270.1| nitrogen-fixing NifU [Rhodobacter sphaeroides 2.4.1]
gi|77387184|gb|ABA78369.1| Nitrogen-fixing NifU [Rhodobacter sphaeroides 2.4.1]
Length = 186
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D +V L +QGAC CPSS +T+KMGIE L
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 145 IPEIVAVESVA 155
IPE++ V VA
Sbjct: 175 IPEVLEVRPVA 185
>gi|37681825|gb|AAQ97790.1| HIRA interacting protein 5 [Danio rerio]
gi|62205090|gb|AAH92670.1| HIRA interacting protein 5 [Danio rerio]
gi|182891738|gb|AAI65097.1| Hirip5 protein [Danio rerio]
Length = 243
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V H + +V+LKLQG+C SCPSS++T+K GI+ L +
Sbjct: 167 IKELLDTRIRPTVQEDGGDVLYHGFEDGIVKLKLQGSCTSCPSSIITLKNGIQNMLQFYV 226
Query: 146 PEIVAVESVADEE 158
PE+ VE V +E+
Sbjct: 227 PEVEGVEQVKEED 239
>gi|403385471|ref|ZP_10927528.1| hypothetical protein KJC30_12265 [Kurthia sp. JC30]
Length = 73
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ V+D++RP+L+ DGG+ L +++ VV+L+L GACGSCPSS +T+K GIER L+
Sbjct: 3 EQVQEVIDKLRPFLLRDGGDCELVDVEDGVVKLRLLGACGSCPSSTITLKAGIERALL 60
>gi|170016007|ref|NP_001116180.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Danio
rerio]
Length = 243
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V H + +V+LKLQG+C SCPSS++T+K GI+ L +
Sbjct: 167 IKELLDTRIRPTVQEDGGDVLYHGFEDGIVKLKLQGSCTSCPSSIITLKNGIQNMLQFYV 226
Query: 146 PEIVAVESVADEE 158
PE+ VE V +E+
Sbjct: 227 PEVEGVEQVKEED 239
>gi|395326149|gb|EJF58562.1| HIRA-interacting protein 5 [Dichomitus squalens LYAD-421 SS1]
Length = 306
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 94 IRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
+RP ++ DGG++ D VV++KL+G+C C SS +T+K GIER LM IPE+ VE
Sbjct: 207 VRPAIMEDGGDIEYRGFTDDGVVQVKLKGSCRGCSSSTVTLKSGIERMLMHYIPEVKGVE 266
Query: 153 SVADEETGLELNE-ENIEKVL 172
+ D+E + LNE E +E+ L
Sbjct: 267 QILDQEEAIALNEFEKLEQRL 287
>gi|303270897|ref|XP_003054810.1| iron-sulfur cluster scaffold protein, plastid precursor [Micromonas
pusilla CCMP1545]
gi|226462784|gb|EEH60062.1| iron-sulfur cluster scaffold protein, plastid precursor [Micromonas
pusilla CCMP1545]
Length = 406
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 92/151 (60%), Gaps = 17/151 (11%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
LPLT EN++ LDE+RPYLI+DGGNVA+ I+ VV +++ GACGSC SS T+K GIE+
Sbjct: 251 LPLTVENVDKALDEVRPYLIADGGNVAVVGIEDGVVAVRMSGACGSCSSSTATLKGGIEK 310
Query: 140 RLM-----EKIPEIVAVESVADEE-TGLELNEENIEKVLEEIRPYLVGA---AGGSLELV 190
L E + E+V ++S DE + L L++E +E LE+ L GA GGS++L+
Sbjct: 311 TLRRVFGGENVKEVVNLDS--DEPGSALTLSKEAVEAHLEK----LAGAIHNYGGSVKLL 364
Query: 191 TI--DEPIVKVRITGPAAGVMTVRVAVTQKL 219
+ E + + +GP A ++ ++ K
Sbjct: 365 EVIESERALVLEFSGPVALAQSIASSIKGKF 395
>gi|372278137|ref|ZP_09514173.1| nitrogen-fixing NifU-like protein [Oceanicola sp. S124]
Length = 187
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 176 IPEVTEVRPVA 186
>gi|146278315|ref|YP_001168474.1| NifU domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
gi|145556556|gb|ABP71169.1| nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides ATCC
17025]
Length = 186
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D +V L +QGAC CPSS +T+KMGIE L
Sbjct: 115 QIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 145 IPEIVAVESVA 155
IPE++ V VA
Sbjct: 175 IPEVLEVRPVA 185
>gi|436838176|ref|YP_007323392.1| nitrogen-fixing NifU domain protein [Fibrella aestuarina BUZ 2]
gi|384069589|emb|CCH02799.1| nitrogen-fixing NifU domain protein [Fibrella aestuarina BUZ 2]
Length = 89
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ +E LD +RPYL +DGGNV + ++ V RL+L G+CGSCP S MT K G+E ++
Sbjct: 12 DRVEKALDSMRPYLAADGGNVRVLDVTAEGVARLELMGSCGSCPMSAMTFKGGLEDAILR 71
Query: 144 KIPEIVAVESV 154
+PEI VE+V
Sbjct: 72 AVPEINRVEAV 82
>gi|126663010|ref|ZP_01734008.1| hypothetical protein FBBAL38_06650 [Flavobacteria bacterium BAL38]
gi|126624668|gb|EAZ95358.1| hypothetical protein FBBAL38_06650 [Flavobacteria bacterium BAL38]
Length = 79
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
EN+E L+EIRP+L SDGG++ L EI D V+++L+GAC +C S+ TMK G+E + +
Sbjct: 8 ENVEKALNEIRPFLNSDGGDITLVEIIDDKHVKVRLEGACTNCSLSISTMKAGVETTIKK 67
Query: 144 KIPEIVAVESVA 155
+P+I VE++A
Sbjct: 68 FVPQIETVENIA 79
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 159 TGLELNEENIEKVLEEIRPYLVGAAGGSLELV-TIDEPIVKVRITGPAAG----VMTVRV 213
T LE+ +EN+EK L EIRP+L + GG + LV ID+ VKVR+ G + T++
Sbjct: 2 TTLEI-KENVEKALNEIRPFL-NSDGGDITLVEIIDDKHVKVRLEGACTNCSLSISTMKA 59
Query: 214 AVTQKLREKIPAIAAVQ 230
V +++ +P I V+
Sbjct: 60 GVETTIKKFVPQIETVE 76
>gi|86134908|ref|ZP_01053490.1| NifU-like protein [Polaribacter sp. MED152]
gi|85821771|gb|EAQ42918.1| NifU-like protein [Polaribacter sp. MED152]
Length = 78
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 49/70 (70%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
N+E LDEIRP+L+SDGGN+ L I+ +V+++LQGAC C + MT+K G+E + +
Sbjct: 9 NVEKALDEIRPFLMSDGGNIKLLSIEDAIVKVQLQGACTGCSVNQMTLKNGVEATIKKYA 68
Query: 146 PEIVAVESVA 155
P+I V +VA
Sbjct: 69 PQIEQVINVA 78
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 167 NIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGV----MTVRVAVTQKLREK 222
N+EK L+EIRP+L+ + GG+++L++I++ IVKV++ G G MT++ V +++
Sbjct: 9 NVEKALDEIRPFLM-SDGGNIKLLSIEDAIVKVQLQGACTGCSVNQMTLKNGVEATIKKY 67
Query: 223 IPAIAAV 229
P I V
Sbjct: 68 APQIEQV 74
>gi|443733606|gb|ELU17898.1| hypothetical protein CAPTEDRAFT_18536 [Capitella teleta]
Length = 207
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 83 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
T I+ +LD IRP + DGG++ + +VRLK+QG+C SCPSSV+T+K G++ L
Sbjct: 112 TVAMIKELLDTRIRPTVQEDGGDIVFMGFEEGIVRLKMQGSCTSCPSSVVTLKSGVQNML 171
Query: 142 MEKIPEIVAVESVADEETGLELNEENIEKVLEEIR 176
IPE++ VE V DE E+ E K E ++
Sbjct: 172 QFYIPEVLGVEQVQDETD--EIAETEFTKFEETLK 204
>gi|310643822|ref|YP_003948580.1| protein NifU [Paenibacillus polymyxa SC2]
gi|309248772|gb|ADO58339.1| NifU-like protein [Paenibacillus polymyxa SC2]
gi|392304552|emb|CCI70915.1| Fe/S biogenesis protein nfuA [Paenibacillus polymyxa M1]
Length = 81
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
+ + VLD++RP+L DGG+V L +++ +V+LKL GACGSCPSS +T+K GIER L+
Sbjct: 11 DEVADVLDKLRPFLQRDGGDVELVDVEDGIVKLKLVGACGSCPSSTITLKAGIERALL 68
>gi|383762818|ref|YP_005441800.1| iron-sulfur cluster assembly protein [Caldilinea aerophila DSM
14535 = NBRC 104270]
gi|381383086|dbj|BAL99902.1| iron-sulfur cluster assembly protein [Caldilinea aerophila DSM
14535 = NBRC 104270]
Length = 106
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I+ VLD RP L DGG+V + ++D N V LK+ GAC CP S++TMK+GI+R L E
Sbjct: 11 QRIQQVLDAYRPNLYMDGGDVEVLKVDENGVAHLKMLGACIDCPISLLTMKLGIQRLLKE 70
Query: 144 KIPEIVAVESVAD 156
PEI V ++ D
Sbjct: 71 HFPEITGVHAITD 83
>gi|72391004|ref|XP_845796.1| HIRA-interacting protein 5 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176423|gb|AAX70531.1| HIRA-interacting protein 5, putative [Trypanosoma brucei]
gi|70802332|gb|AAZ12237.1| HIRA-interacting protein 5, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 280
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP L +DGGNV +D V + L+GAC SCPSS +T+K GIER LM IPE+V V+
Sbjct: 191 IRPLLRADGGNVRYISMDDGTVFVLLEGACKSCPSSGVTLKNGIERMLMHWIPEVVEVQE 250
Query: 154 VADEETGLELNEENIEKVLEE 174
DE L E+ + + L++
Sbjct: 251 CTDEMASDLLAEKELRRKLKK 271
>gi|332798963|ref|YP_004460462.1| nitrogen-fixing NifU domain-containing protein [Tepidanaerobacter
acetatoxydans Re1]
gi|438002054|ref|YP_007271797.1| NifU-like domain protein [Tepidanaerobacter acetatoxydans Re1]
gi|332696698|gb|AEE91155.1| nitrogen-fixing NifU domain-containing protein [Tepidanaerobacter
acetatoxydans Re1]
gi|432178848|emb|CCP25821.1| NifU-like domain protein [Tepidanaerobacter acetatoxydans Re1]
Length = 74
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E +E VL++IRP L +DGG+V L ++D +V+++L GACG CP + MT+K GIE L
Sbjct: 3 EKVEVVLNKIRPSLQADGGDVELVDVDEVAGIVKVRLTGACGGCPFATMTLKNGIEEALK 62
Query: 143 EKIPEIVAVESV 154
E+IPE+ V+ V
Sbjct: 63 EEIPEVKEVQQV 74
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDE--PIVKVRITGPAAG----VMTVRVAVTQK 218
+E +E VL +IRP L A GG +ELV +DE IVKVR+TG G MT++ + +
Sbjct: 2 KEKVEVVLNKIRPSL-QADGGDVELVDVDEVAGIVKVRLTGACGGCPFATMTLKNGIEEA 60
Query: 219 LREKIPAIAAVQ 230
L+E+IP + VQ
Sbjct: 61 LKEEIPEVKEVQ 72
>gi|339319560|ref|YP_004679255.1| NifU domain-containing protein [Candidatus Midichloria mitochondrii
IricVA]
gi|338225685|gb|AEI88569.1| NifU domain protein [Candidatus Midichloria mitochondrii IricVA]
Length = 197
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 11/137 (8%)
Query: 28 KSTKSFF--GERVSLTRWRNPVCHSSCRLLLI----RKRGAARRNVIKAVATPDSAIELP 81
K TKS F E +S+T+ N + S + L++ A V+++ TP +
Sbjct: 62 KGTKSVFLASEFISVTK-ENELSWDSLKTLIMAAIMDHYMAGYPVVLESFYTPQENTKHE 120
Query: 82 LT---AENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
++ I ++D ++RP + DGG++ H+ + ++ L++ GAC CPSS +T+K GI
Sbjct: 121 VSDAIVNQIREIIDNKVRPAVAEDGGDIMFHKFENGIIYLEMYGACSGCPSSAVTLKSGI 180
Query: 138 ERRLMEKIPEIVAVESV 154
E+ L +PE++ VES+
Sbjct: 181 EKMLKHYVPEVLGVESI 197
>gi|392412459|ref|YP_006449066.1| thioredoxin-like protein [Desulfomonile tiedjei DSM 6799]
gi|390625595|gb|AFM26802.1| thioredoxin-like protein [Desulfomonile tiedjei DSM 6799]
Length = 73
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEID-GNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E I++ LD +RP L +DGG+ + ++ +V+L+L+GACG CP S MT+KMGIER L E
Sbjct: 3 EEIQAALDLVRPQLQADGGDAEIVDVTPEGIVKLRLKGACGGCPMSQMTLKMGIERILKE 62
Query: 144 KIPEIVAVESV 154
++P + +VE+V
Sbjct: 63 RVPAVKSVEAV 73
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTID-EPIVKVRITGPAAGV----MTVRVAVTQKLR 220
E I+ L+ +RP L A GG E+V + E IVK+R+ G G MT+++ + + L+
Sbjct: 3 EEIQAALDLVRPQL-QADGGDAEIVDVTPEGIVKLRLKGACGGCPMSQMTLKMGIERILK 61
Query: 221 EKIPAIAAVQ 230
E++PA+ +V+
Sbjct: 62 ERVPAVKSVE 71
>gi|326430239|gb|EGD75809.1| HIRA-interacting protein 5 [Salpingoeca sp. ATCC 50818]
Length = 269
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ E +V+LKL GAC CPSS+ T+K G+E LM I
Sbjct: 176 IKELLDTRIRPAVQDDGGDIIFMEFTNGIVKLKLSGACEGCPSSMYTLKQGVENMLMHYI 235
Query: 146 PEIVAVESVADEE 158
PE+ VE V D E
Sbjct: 236 PEVEGVEQVEDTE 248
>gi|261329222|emb|CBH12201.1| HIRA-interacting protein 5, putative [Trypanosoma brucei gambiense
DAL972]
Length = 280
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP L +DGGNV +D V + L+GAC SCPSS +T+K GIER LM IPE+V V+
Sbjct: 191 IRPLLRADGGNVRYISMDDGTVFVLLEGACKSCPSSGVTLKNGIERMLMHWIPEVVEVQE 250
Query: 154 VADEETGLELNEENIEKVLEE 174
DE L E+ + + L++
Sbjct: 251 CTDEMASDLLAEKELRRKLKK 271
>gi|373855944|ref|ZP_09598690.1| nitrogen-fixing NifU domain protein [Bacillus sp. 1NLA3E]
gi|372455013|gb|EHP28478.1| nitrogen-fixing NifU domain protein [Bacillus sp. 1NLA3E]
Length = 78
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 45/57 (78%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
++ VLD++RP+L+ DGG+ L +I+ +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 9 QVQEVLDKLRPFLLRDGGDCELVDIEDGIVKLRLLGACGSCPSSTITLKAGIERALL 65
>gi|57864812|gb|AAW56987.1| nitrogen fixation protein U [Cyanothece sp. ATCC 51142]
Length = 285
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VL+E IRP+L DGG++ L +I+G++V++ LQGACGSC SS T+K GIE RL E++
Sbjct: 217 IQQVLEEEIRPFLAKDGGDLELIDIEGDLVKVTLQGACGSCASSTATLKGGIEARLKERV 276
Query: 146 -PEIVAV 151
PE+ +
Sbjct: 277 SPELTVI 283
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 14/117 (11%)
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEI-VAVESV-ADEETGLELNEENI---EKV 171
+K G CGSC + + M I L EK + VA E V A ET N + I ++V
Sbjct: 164 VKAGGGCGSCLADIDDMIADI---LQEKATAVAVATEVVKAKSETKPLTNLQKITLIQQV 220
Query: 172 LEE-IRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREKI 223
LEE IRP+L GG LEL+ I+ +VKV + G A+ T++ + +L+E++
Sbjct: 221 LEEEIRPFLA-KDGGDLELIDIEGDLVKVTLQGACGSCASSTATLKGGIEARLKERV 276
>gi|83949998|ref|ZP_00958731.1| nifU domain protein [Roseovarius nubinhibens ISM]
gi|83837897|gb|EAP77193.1| nifU domain protein [Roseovarius nubinhibens ISM]
Length = 188
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 117 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTITLKMGIENLLRHY 176
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 177 IPEVTEVRPVA 187
>gi|428204101|ref|YP_007082690.1| Fe-S cluster assembly protein NifU [Pleurocapsa sp. PCC 7327]
gi|427981533|gb|AFY79133.1| Fe-S cluster assembly protein NifU [Pleurocapsa sp. PCC 7327]
Length = 298
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD E+RP+L +DGG+V L++++GN V + L+GAC CPS T+KMGIE +L E++
Sbjct: 229 IQEILDKEVRPFLATDGGDVELYDVEGNRVLVMLKGACDGCPSVTATLKMGIEAKLQERV 288
Query: 146 PEIVAVESV 154
+ VE++
Sbjct: 289 SPDLVVEAI 297
>gi|116748860|ref|YP_845547.1| NifU domain-containing protein [Syntrophobacter fumaroxidans MPOB]
gi|116697924|gb|ABK17112.1| nitrogen-fixing NifU domain protein [Syntrophobacter fumaroxidans
MPOB]
Length = 72
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ +E L +IRP L DGG+V L ++ G VV+++L GAC CP S MT+K GIER + E
Sbjct: 3 KKVEEALAKIRPMLERDGGSVELVDVQGTVVKVRLTGACHGCPMSQMTLKAGIERVVKEN 62
Query: 145 IPEIVAVESV 154
+PE+ V+SV
Sbjct: 63 VPEVTEVQSV 72
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGV----MTVRVAVTQKLRE 221
+ +E+ L +IRP L GGS+ELV + +VKVR+TG G MT++ + + ++E
Sbjct: 3 KKVEEALAKIRPML-ERDGGSVELVDVQGTVVKVRLTGACHGCPMSQMTLKAGIERVVKE 61
Query: 222 KIPAIAAVQ 230
+P + VQ
Sbjct: 62 NVPEVTEVQ 70
>gi|198470316|ref|XP_002133420.1| GA22888 [Drosophila pseudoobscura pseudoobscura]
gi|263504850|sp|B5DKJ8.1|NFU1_DROPS RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|198145392|gb|EDY72048.1| GA22888 [Drosophila pseudoobscura pseudoobscura]
Length = 286
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVLEEIRP--YLVGAAGG 185
PE+ +VE V D+ + E E EK L++ P VG GG
Sbjct: 242 PEVESVEQVFDDVDRMADKEFERFEKNLKQKEPAGAPVGIGGG 284
>gi|375142641|ref|YP_005003290.1| thioredoxin-like protein [Mycobacterium rhodesiae NBB3]
gi|359823262|gb|AEV76075.1| thioredoxin-like protein [Mycobacterium rhodesiae NBB3]
Length = 321
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI----DGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
IE LD +RPYL S GG+VAL E+ DG VVRL+ G+C SCPSS +T++ +E +
Sbjct: 100 IEDALDGVRPYLGSHGGDVALLEVVERQDGPVVRLQFAGSCKSCPSSAVTLEYAVEDAVR 159
Query: 143 EKIPEIVAVESVA 155
PEIV++E VA
Sbjct: 160 AAAPEIVSIEVVA 172
>gi|172035474|ref|YP_001801975.1| iron-sulfur cluster assembly protein [Cyanothece sp. ATCC 51142]
gi|354555563|ref|ZP_08974864.1| Fe-S cluster assembly protein NifU [Cyanothece sp. ATCC 51472]
gi|171696928|gb|ACB49909.1| iron-sulfur cluster assembly protein [Cyanothece sp. ATCC 51142]
gi|353552622|gb|EHC22017.1| Fe-S cluster assembly protein NifU [Cyanothece sp. ATCC 51472]
Length = 293
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VL+E IRP+L DGG++ L +I+G++V++ LQGACGSC SS T+K GIE RL E++
Sbjct: 225 IQQVLEEEIRPFLAKDGGDLELIDIEGDLVKVTLQGACGSCASSTATLKGGIEARLKERV 284
Query: 146 -PEIVAV 151
PE+ +
Sbjct: 285 SPELTVI 291
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 14/117 (11%)
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEI-VAVESV-ADEETGLELNEENI---EKV 171
+K G CGSC + + M I L EK + VA E V A ET N + I ++V
Sbjct: 172 VKAGGGCGSCLADIDDMIADI---LQEKATAVAVATEVVKAKSETKPLTNLQKITLIQQV 228
Query: 172 LEE-IRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREKI 223
LEE IRP+L GG LEL+ I+ +VKV + G A+ T++ + +L+E++
Sbjct: 229 LEEEIRPFLA-KDGGDLELIDIEGDLVKVTLQGACGSCASSTATLKGGIEARLKERV 284
>gi|89100547|ref|ZP_01173407.1| nitrogen fixation protein (NifU protein) [Bacillus sp. NRRL
B-14911]
gi|89084734|gb|EAR63875.1| nitrogen fixation protein (NifU protein) [Bacillus sp. NRRL
B-14911]
Length = 77
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 46/57 (80%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
+++ VLD++RP+L+ DGG+ L +++ +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 8 DVQEVLDKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERALL 64
>gi|108761437|ref|YP_634156.1| NifU family protein [Myxococcus xanthus DK 1622]
gi|108465317|gb|ABF90502.1| NifU family protein [Myxococcus xanthus DK 1622]
Length = 188
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD EIRP + DGG++ L + +V L ++GAC CPSS T+KMGIE RL E I
Sbjct: 120 IQDILDNEIRPAVAMDGGDITLDRFEDGIVYLHMKGACAGCPSSTATLKMGIEGRLREMI 179
Query: 146 PEIVAVESV 154
PE++ V SV
Sbjct: 180 PEVLEVVSV 188
>gi|404493984|ref|YP_006718090.1| thioredoxin/NifU-like domain-containing protein [Pelobacter
carbinolicus DSM 2380]
gi|404398041|gb|ABA89570.2| thioredoxin/NifU-like domain protein [Pelobacter carbinolicus DSM
2380]
Length = 75
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E + +LD+IRP L +DGG+V L +I + VV+++L+GACGSCP S MT+KMGIER L
Sbjct: 3 EQVLEILDKIRPSLQADGGDVELVDISEDGVVKVRLKGACGSCPMSTMTLKMGIERTLKA 62
Query: 144 KIPEI 148
++P +
Sbjct: 63 QVPGV 67
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAA----GVMTVRVAVTQKL 219
+E + ++L++IRP L A GG +ELV I E +VKVR+ G MT+++ + + L
Sbjct: 2 KEQVLEILDKIRPSL-QADGGDVELVDISEDGVVKVRLKGACGSCPMSTMTLKMGIERTL 60
Query: 220 REKIPAIAAV 229
+ ++P + V
Sbjct: 61 KAQVPGVKEV 70
>gi|391334432|ref|XP_003741608.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Metaseiulus occidentalis]
Length = 253
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
+ AE I+S IRP ++ DGG++ L +V L+LQG+C +CPSS +T+K GIE L
Sbjct: 158 MIAELIDS---RIRPTVMEDGGDIVLRAFKDGIVELELQGSCTNCPSSSVTLKAGIENML 214
Query: 142 MEKIPEIVAVESVADEETGLELNEENIEKVLEEIR 176
M +PE+ V+ V +E EL+ + +K+ E+IR
Sbjct: 215 MFYVPEVRGVKEVLSKED--ELSHKEFQKLEEKIR 247
>gi|115376684|ref|ZP_01463912.1| NifU domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310823922|ref|YP_003956280.1| NIF system FeS cluster assembly, NifU family protein [Stigmatella
aurantiaca DW4/3-1]
gi|115366301|gb|EAU65308.1| NifU domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309396994|gb|ADO74453.1| NIF system FeS cluster assembly, NifU family protein [Stigmatella
aurantiaca DW4/3-1]
Length = 187
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I +LD EIRP + DGG++ L + VV L +QG+C CPSS T+KMGIE RL E
Sbjct: 117 QRIREILDAEIRPAVAQDGGDITLDRYENGVVYLHMQGSCSGCPSSTATLKMGIEGRLRE 176
Query: 144 KIPEIVAVESV 154
IPE+ V S+
Sbjct: 177 AIPEVTEVVSI 187
>gi|291279936|ref|YP_003496771.1| nitrogen-fixing NifU domain protein [Deferribacter desulfuricans
SSM1]
gi|290754638|dbj|BAI81015.1| nitrogen-fixing NifU domain protein [Deferribacter desulfuricans
SSM1]
Length = 75
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ VL+++RP L +DGG+V L ++ + VV+++L GACGSCP S MT+K GIE RL E
Sbjct: 5 ERVQEVLNQVRPGLQADGGDVELLDVTEDGVVKVQLTGACGSCPFSTMTLKHGIEMRLKE 64
Query: 144 KIPEI 148
IPE+
Sbjct: 65 MIPEV 69
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAA----GVMTVRVAVTQKL 219
+E +++VL ++RP L A GG +EL+ + E +VKV++TG MT++ + +L
Sbjct: 4 KERVQEVLNQVRPGL-QADGGDVELLDVTEDGVVKVQLTGACGSCPFSTMTLKHGIEMRL 62
Query: 220 REKIPAIAAV 229
+E IP + V
Sbjct: 63 KEMIPEVKEV 72
>gi|432874670|ref|XP_004072534.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Oryzias latipes]
Length = 250
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + VV+LKLQG+C SCPSS++T+K GI+ L +
Sbjct: 171 IKELLDTRIRPTVQEDGGDVVYRGFEDGVVKLKLQGSCTSCPSSIVTLKSGIQNMLQFYV 230
Query: 146 PEIVAVESVADEE 158
PE+ +VE V D+E
Sbjct: 231 PEVESVEQVKDDE 243
>gi|195482335|ref|XP_002102005.1| GE15286 [Drosophila yakuba]
gi|263505516|sp|B4PZ52.1|NFU1_DROYA RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194189529|gb|EDX03113.1| GE15286 [Drosophila yakuba]
Length = 283
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 7/97 (7%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 146 PEIVAVESVADE-----ETGLELNEENIEKVLEEIRP 177
PE+ +VE V DE ++ E E+N+ K L++ P
Sbjct: 242 PEVESVEQVFDEADRMVDSEFERFEKNL-KTLKQQEP 277
>gi|194897711|ref|XP_001978709.1| GG17526 [Drosophila erecta]
gi|263504966|sp|B3NYF7.1|NFU1_DROER RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|190650358|gb|EDV47636.1| GG17526 [Drosophila erecta]
Length = 283
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 7/101 (6%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 146 PEIVAVESVADE-----ETGLELNEENIEKVLEEIRPYLVG 181
PE+ +VE V DE ++ E E+N+ K L++ P G
Sbjct: 242 PEVESVEQVFDEADRMIDSEFERFEKNL-KTLKQQEPSGAG 281
>gi|431912616|gb|ELK14634.1| NFU1 iron-sulfur cluster scaffold like protein, mitochondrial
[Pteropus alecto]
Length = 318
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 237 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 296
Query: 146 PEIVAVESVADEE 158
PE+ VE V D+E
Sbjct: 297 PEVEGVEQVTDDE 309
>gi|402891127|ref|XP_003908809.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 1 [Papio anubis]
Length = 254
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 232
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 233 PEVEGVEQVMDDES 246
>gi|381211734|ref|ZP_09918805.1| nitrogen fixation protein [Lentibacillus sp. Grbi]
Length = 74
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ VL ++RP+L+ DGG+V L ++D + V ++L GACG+CPSS +T+K GIER L
Sbjct: 3 EQVQEVLTKLRPFLLRDGGDVELIDVDDDGTVLIRLMGACGNCPSSTITLKAGIERALRS 62
Query: 144 KIPEIVAVESV 154
++P + +E V
Sbjct: 63 EVPGVTEIEQV 73
>gi|149727512|ref|XP_001491099.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like isoform 1 [Equus caballus]
Length = 253
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 172 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 231
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 232 PEVEGVEQVMDDES 245
>gi|426335854|ref|XP_004029421.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Gorilla gorilla gorilla]
Length = 213
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 132 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 191
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 192 PEVEGVEQVMDDES 205
>gi|302342797|ref|YP_003807326.1| nitrogen-fixing NifU domain-containing protein [Desulfarculus
baarsii DSM 2075]
gi|301639410|gb|ADK84732.1| nitrogen-fixing NifU domain protein [Desulfarculus baarsii DSM
2075]
Length = 73
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ ++ LD+IRP L DGG+V L ++ D VV+++LQGAC CP S MT+KMGIE+ L +
Sbjct: 3 QRVQEALDKIRPALQKDGGDVKLVDVSDDGVVKVQLQGACHGCPMSQMTLKMGIEKVLKQ 62
Query: 144 KIPEIVAVESV 154
+PE+ VESV
Sbjct: 63 NVPEVQKVESV 73
>gi|332226734|ref|XP_003262547.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 3 [Nomascus leucogenys]
Length = 230
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 149 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 208
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 209 PEVEGVEQVMDDES 222
>gi|114577877|ref|XP_001137587.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 7 [Pan troglodytes]
Length = 230
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 149 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 208
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 209 PEVEGVEQVMDDES 222
>gi|34500319|gb|AAQ73784.1| NifU-like protein HIRIP5 [Homo sapiens]
gi|194374137|dbj|BAG62381.1| unnamed protein product [Homo sapiens]
Length = 254
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 232
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 233 PEVEGVEQVMDDES 246
>gi|195568040|ref|XP_002107563.1| GD15490 [Drosophila simulans]
gi|263505455|sp|B4R3T1.1|NFU1_DROSI RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194204973|gb|EDX18549.1| GD15490 [Drosophila simulans]
Length = 283
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVLEEIRPYLVGAAGG 185
PE+ +VE V DE + +E E EK L+ ++ G +GG
Sbjct: 242 PEVESVEQVFDEADRMIDSEFERFEKNLKTLKQQ--GPSGG 280
>gi|50593025|ref|NP_056515.2| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 1
[Homo sapiens]
gi|32967071|gb|AAP92373.1| cytosolic iron-sulfur cluster scaffold protein Nfu [Homo sapiens]
gi|119620256|gb|EAW99850.1| HIRA interacting protein 5, isoform CRA_b [Homo sapiens]
Length = 230
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 149 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 208
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 209 PEVEGVEQVMDDES 222
>gi|55596270|ref|XP_525775.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 8 [Pan troglodytes]
gi|397521803|ref|XP_003830976.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Pan paniscus]
gi|410209724|gb|JAA02081.1| NFU1 iron-sulfur cluster scaffold homolog [Pan troglodytes]
gi|410253660|gb|JAA14797.1| NFU1 iron-sulfur cluster scaffold homolog [Pan troglodytes]
gi|410291790|gb|JAA24495.1| NFU1 iron-sulfur cluster scaffold homolog [Pan troglodytes]
gi|410333769|gb|JAA35831.1| NFU1 iron-sulfur cluster scaffold homolog [Pan troglodytes]
Length = 254
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 232
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 233 PEVEGVEQVMDDES 246
>gi|334339956|ref|YP_004544936.1| nitrogen-fixing NifU domain-containing protein [Desulfotomaculum
ruminis DSM 2154]
gi|334091310|gb|AEG59650.1| nitrogen-fixing NifU domain protein [Desulfotomaculum ruminis DSM
2154]
Length = 74
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ VL+++RP+L DGG+V ++D N VV++KL+GACGSCP ++ T+K G+ER L +
Sbjct: 3 EKVKEVLEQVRPFLQRDGGDVEFVDMDENGVVKVKLKGACGSCPGALYTLKNGVERTLKQ 62
Query: 144 KIPEIVAV 151
++PE+ V
Sbjct: 63 QVPEVTEV 70
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPA----AGVMTVRVAVTQKL 219
+E +++VLE++RP+L GG +E V +DE +VKV++ G + T++ V + L
Sbjct: 2 KEKVKEVLEQVRPFL-QRDGGDVEFVDMDENGVVKVKLKGACGSCPGALYTLKNGVERTL 60
Query: 220 REKIPAIAAV 229
++++P + V
Sbjct: 61 KQQVPEVTEV 70
>gi|313206297|ref|YP_004045474.1| nitrogen-fixing nifu domain-containing protein [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|383485604|ref|YP_005394516.1| nitrogen-fixing nifu domain protein [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|386321717|ref|YP_006017879.1| thioredoxin-like protein [Riemerella anatipestifer RA-GD]
gi|416110606|ref|ZP_11592150.1| Nitrogen-fixing NifU, C-terminal [Riemerella anatipestifer RA-YM]
gi|442314513|ref|YP_007355816.1| Thioredoxin-like protein and domains [Riemerella anatipestifer
RA-CH-2]
gi|312445613|gb|ADQ81968.1| nitrogen-fixing NifU domain protein [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|315023020|gb|EFT36033.1| Nitrogen-fixing NifU, C-terminal [Riemerella anatipestifer RA-YM]
gi|325336260|gb|ADZ12534.1| Thioredoxin-like protein [Riemerella anatipestifer RA-GD]
gi|380460289|gb|AFD55973.1| nitrogen-fixing nifu domain protein [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|441483436|gb|AGC40122.1| Thioredoxin-like protein and domains [Riemerella anatipestifer
RA-CH-2]
Length = 78
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+E+ L+ IRP+L DGG++ L +I+ VV +KL G C CP S TMK+G+E + EK+P
Sbjct: 10 VENALESIRPFLNKDGGDIELIKIEDTVVYVKLLGNCSGCPVSFSTMKLGVENTVKEKVP 69
Query: 147 EIVAVESV 154
EI VE+V
Sbjct: 70 EITRVENV 77
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 168 IEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAG----VMTVRVAVTQKLREKI 223
+E LE IRP+L GG +EL+ I++ +V V++ G +G T+++ V ++EK+
Sbjct: 10 VENALESIRPFL-NKDGGDIELIKIEDTVVYVKLLGNCSGCPVSFSTMKLGVENTVKEKV 68
Query: 224 PAIAAVQ 230
P I V+
Sbjct: 69 PEITRVE 75
>gi|355751378|gb|EHH55633.1| hypothetical protein EGM_04877 [Macaca fascicularis]
Length = 254
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 232
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 233 PEVEGVEQVMDDES 246
>gi|34500321|gb|AAQ73785.1| NifU-like protein HIRIP5, partial [Mus musculus]
Length = 245
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +VRLKLQG+C SCPSS++T+K GI+ L I
Sbjct: 163 IKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYI 222
Query: 146 PEIVAVESVADEE 158
PE+ VE V D++
Sbjct: 223 PEVEGVEQVMDDD 235
>gi|332226730|ref|XP_003262545.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 1 [Nomascus leucogenys]
Length = 254
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 232
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 233 PEVEGVEQVMDDES 246
>gi|351708084|gb|EHB11003.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Heterocephalus glaber]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 148 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 207
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 208 PEVEGVEQVMDDES 221
>gi|50593021|ref|NP_001002755.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
[Homo sapiens]
gi|205371805|sp|Q9UMS0.2|NFU1_HUMAN RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; AltName: Full=HIRA-interacting protein 5;
Flags: Precursor
gi|32967069|gb|AAP92372.1| iron-sulfur cluster scaffold protein Nfu [Homo sapiens]
gi|109731123|gb|AAI13693.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Homo
sapiens]
gi|109731125|gb|AAI13695.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Homo
sapiens]
gi|119620255|gb|EAW99849.1| HIRA interacting protein 5, isoform CRA_a [Homo sapiens]
gi|261860742|dbj|BAI46893.1| NFU1 iron-sulfur cluster scaffold homolog [synthetic construct]
gi|313884030|gb|ADR83501.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
[synthetic construct]
Length = 254
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 232
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 233 PEVEGVEQVMDDES 246
>gi|355565754|gb|EHH22183.1| hypothetical protein EGK_05404 [Macaca mulatta]
gi|380789185|gb|AFE66468.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
[Macaca mulatta]
gi|384941620|gb|AFI34415.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
[Macaca mulatta]
Length = 254
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 232
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 233 PEVEGVEQVMDDES 246
>gi|295695724|ref|YP_003588962.1| nitrogen-fixing NifU domain-containing protein [Kyrpidia tusciae
DSM 2912]
gi|295411326|gb|ADG05818.1| nitrogen-fixing NifU domain protein [Kyrpidia tusciae DSM 2912]
Length = 73
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E +E L+ IRP L DGG+V L +++ VV L L GACG+CP S MT+KMGIER L
Sbjct: 4 EKVEEALERIRPGLQFDGGDVELVDVEDGVVTLHLIGACGACPMSTMTLKMGIERALRAA 63
Query: 145 IPEIVAVESV 154
+PE+ V +V
Sbjct: 64 VPEVKEVIAV 73
>gi|4680705|gb|AAD27742.1|AF132967_1 CGI-33 protein [Homo sapiens]
Length = 231
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 150 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 209
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 210 PEVEGVEQVMDDES 223
>gi|407451848|ref|YP_006723573.1| thioredoxin-like protein [Riemerella anatipestifer RA-CH-1]
gi|403312832|gb|AFR35673.1| Thioredoxin-like protein [Riemerella anatipestifer RA-CH-1]
Length = 78
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+E+ L+ IRP+L DGG++ L +I+ VV +KL G C CP S TMK+G+E + EK+P
Sbjct: 10 VENALESIRPFLNKDGGDIELIKIEDTVVYVKLLGNCSGCPVSFSTMKLGVENTVKEKVP 69
Query: 147 EIVAVESV 154
EI VE+V
Sbjct: 70 EITRVENV 77
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 168 IEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAG----VMTVRVAVTQKLREKI 223
+E LE IRP+L GG +EL+ I++ +V V++ G +G T+++ V ++EK+
Sbjct: 10 VENALESIRPFL-NKDGGDIELIKIEDTVVYVKLLGNCSGCPVSFSTMKLGVENTVKEKV 68
Query: 224 PAIAAVQ 230
P I V+
Sbjct: 69 PEITRVE 75
>gi|114053059|ref|NP_001040031.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Bos
taurus]
gi|86823819|gb|AAI05370.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Bos
taurus]
gi|296482427|tpg|DAA24542.1| TPA: HIRA interacting protein 5 [Bos taurus]
Length = 253
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 172 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 231
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 232 PEVEGVEQVMDDES 245
>gi|148666782|gb|EDK99198.1| mCG130855, isoform CRA_b [Mus musculus]
Length = 256
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +VRLKLQG+C SCPSS++T+K GI+ L I
Sbjct: 174 IKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYI 233
Query: 146 PEIVAVESVADEE 158
PE+ VE V D++
Sbjct: 234 PEVEGVEQVMDDD 246
>gi|282154803|ref|NP_001164062.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 1
precursor [Mus musculus]
gi|74211556|dbj|BAE26508.1| unnamed protein product [Mus musculus]
Length = 256
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +VRLKLQG+C SCPSS++T+K GI+ L I
Sbjct: 174 IKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYI 233
Query: 146 PEIVAVESVADEE 158
PE+ VE V D++
Sbjct: 234 PEVEGVEQVMDDD 246
>gi|148666781|gb|EDK99197.1| mCG130855, isoform CRA_a [Mus musculus]
Length = 255
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +VRLKLQG+C SCPSS++T+K GI+ L I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYI 232
Query: 146 PEIVAVESVADEE 158
PE+ VE V D++
Sbjct: 233 PEVEGVEQVMDDD 245
>gi|403260510|ref|XP_003922711.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 2 [Saimiri boliviensis boliviensis]
Length = 230
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 149 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 208
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 209 PEVEGVEQVMDDES 222
>gi|402891129|ref|XP_003908810.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 2 [Papio anubis]
gi|380786363|gb|AFE65057.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
[Macaca mulatta]
Length = 230
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 149 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 208
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 209 PEVEGVEQVMDDES 222
>gi|332982274|ref|YP_004463715.1| nitrogen-fixing NifU domain-containing protein [Mahella
australiensis 50-1 BON]
gi|332699952|gb|AEE96893.1| nitrogen-fixing NifU domain protein [Mahella australiensis 50-1
BON]
Length = 73
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 53/72 (73%), Gaps = 3/72 (4%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E +E+ L++IRP L +DGG+V L ++ DG VV++KL GACG+CP ++MT+K GIE L
Sbjct: 3 EKVEAALEKIRPALKADGGDVELVDVASDG-VVKVKLTGACGACPFALMTLKQGIEETLK 61
Query: 143 EKIPEIVAVESV 154
E +PE+ V +V
Sbjct: 62 ESVPEVKEVVAV 73
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKL 219
+E +E LE+IRP L A GG +ELV + + +VKV++TG +MT++ + + L
Sbjct: 2 KEKVEAALEKIRPAL-KADGGDVELVDVASDGVVKVKLTGACGACPFALMTLKQGIEETL 60
Query: 220 REKIPAIAAV 229
+E +P + V
Sbjct: 61 KESVPEVKEV 70
>gi|149202972|ref|ZP_01879943.1| nitrogen-fixing NifU-like protein [Roseovarius sp. TM1035]
gi|149143518|gb|EDM31554.1| nitrogen-fixing NifU-like protein [Roseovarius sp. TM1035]
Length = 187
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 75 DSAIELPLTAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTM 133
DSAI I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+
Sbjct: 110 DSAI-----VNQIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTITL 164
Query: 134 KMGIERRLMEKIPEIVAVESVA 155
KMGIE L IPE+ V V
Sbjct: 165 KMGIENLLRHYIPEVTEVRPVG 186
>gi|282154801|ref|NP_064429.2| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
precursor [Mus musculus]
gi|205830867|sp|Q9QZ23.2|NFU1_MOUSE RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; AltName: Full=HIRA-interacting protein 5;
Short=mHIRIP5; Flags: Precursor
gi|12834577|dbj|BAB22965.1| unnamed protein product [Mus musculus]
Length = 255
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +VRLKLQG+C SCPSS++T+K GI+ L I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYI 232
Query: 146 PEIVAVESVADEE 158
PE+ VE V D++
Sbjct: 233 PEVEGVEQVMDDD 245
>gi|395509269|ref|XP_003758923.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Sarcophilus harrisii]
Length = 253
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 172 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 231
Query: 146 PEIVAVESVADEE 158
PE+ VE V D+E
Sbjct: 232 PEVEGVEQVVDDE 244
>gi|340027770|ref|ZP_08663833.1| NifU domain-containing protein [Paracoccus sp. TRP]
Length = 184
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 114 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 173
Query: 145 IPEIVAVESVA 155
IPE+ V V
Sbjct: 174 IPEVTEVRPVG 184
>gi|195357024|ref|XP_002044916.1| GM13534 [Drosophila sechellia]
gi|263505008|sp|B4IMF6.1|NFU1_DROSE RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194124051|gb|EDW46094.1| GM13534 [Drosophila sechellia]
Length = 283
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 7/97 (7%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 146 PEIVAVESVADE-----ETGLELNEENIEKVLEEIRP 177
PE+ +VE V DE ++ E E+N+ K L++ P
Sbjct: 242 PEVESVEQVFDEADRMIDSEFERFEKNL-KTLKQQEP 277
>gi|195132295|ref|XP_002010579.1| GI14603 [Drosophila mojavensis]
gi|193909029|gb|EDW07896.1| GI14603 [Drosophila mojavensis]
Length = 259
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 155 IKELLDTRIRPTVQEDGGDIVFMGYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 214
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVLEE 174
PE+ +VE V DE + E E EK L++
Sbjct: 215 PEVESVEQVFDEADKVANKEFERFEKSLKQ 244
>gi|384919122|ref|ZP_10019183.1| nitrogen-fixing NifU-like protein [Citreicella sp. 357]
gi|384467060|gb|EIE51544.1| nitrogen-fixing NifU-like protein [Citreicella sp. 357]
Length = 186
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 115 QIKELLDTRVRPGVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 175 IPEVSEVRPVA 185
>gi|317154501|ref|YP_004122549.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
aespoeensis Aspo-2]
gi|316944752|gb|ADU63803.1| nitrogen-fixing NifU domain protein [Desulfovibrio aespoeensis
Aspo-2]
Length = 74
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E + VLD++RP L DGG+V L +I D +V+++L GAC CP S MT+K GIER +++
Sbjct: 3 EKVMKVLDKVRPALQGDGGDVELVDITDKGIVQVRLTGACKGCPMSQMTLKNGIERIILK 62
Query: 144 KIPEIVAVESVA 155
+IPEI VE+V+
Sbjct: 63 EIPEIKGVEAVS 74
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVTQKLR 220
E + KVL+++RP L G GG +ELV I D+ IV+VR+TG G MT++ + + +
Sbjct: 3 EKVMKVLDKVRPALQGD-GGDVELVDITDKGIVQVRLTGACKGCPMSQMTLKNGIERIIL 61
Query: 221 EKIPAIAAVQ 230
++IP I V+
Sbjct: 62 KEIPEIKGVE 71
>gi|403260508|ref|XP_003922710.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 1 [Saimiri boliviensis boliviensis]
Length = 254
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 232
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 233 PEVEGVEQVMDDES 246
>gi|26324295|dbj|BAC24985.1| unnamed protein product [Mus musculus]
Length = 200
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +VRLKLQG+C SCPSS++T+K GI+ L I
Sbjct: 118 IKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYI 177
Query: 146 PEIVAVESVADEE 158
PE+ VE V D++
Sbjct: 178 PEVEGVEQVMDDD 190
>gi|119383283|ref|YP_914339.1| NifU domain-containing protein [Paracoccus denitrificans PD1222]
gi|119373050|gb|ABL68643.1| nitrogen-fixing NifU domain protein [Paracoccus denitrificans
PD1222]
Length = 184
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 114 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 173
Query: 145 IPEIVAVESVA 155
IPE+ V V
Sbjct: 174 IPEVTEVRPVG 184
>gi|345776689|ref|XP_855433.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Canis lupus familiaris]
Length = 252
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 171 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 230
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 231 PEVEGVEQVMDDES 244
>gi|224001364|ref|XP_002290354.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973776|gb|EED92106.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 69
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 43/57 (75%), Gaps = 4/57 (7%)
Query: 94 IRPYLISDGGNVALHEID---GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPE 147
+RPYLISDGGNV++ +D GNV L L+GACGSC SS +TMKMGIER L EK +
Sbjct: 1 VRPYLISDGGNVSVQNVDAGTGNVYLL-LEGACGSCASSTVTMKMGIERVLKEKFED 56
>gi|406924334|gb|EKD61156.1| hypothetical protein ACD_54C00370G0002 [uncultured bacterium]
Length = 185
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I+ +LD +RP + DGG++ H D +V L ++GAC CPSS +T+KMGIE L
Sbjct: 113 KQIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMKGACAGCPSSTLTLKMGIENLLRH 172
Query: 144 KIPEIVAVESVA 155
IPE++ V VA
Sbjct: 173 YIPEVLEVRPVA 184
>gi|395841324|ref|XP_003793493.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 1 [Otolemur garnettii]
gi|395841326|ref|XP_003793494.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 2 [Otolemur garnettii]
Length = 229
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 148 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 207
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 208 PEVEGVEQVMDDES 221
>gi|6013069|emb|CAB57314.1| HIRA-interacting protein (HIRIP5) [Mus musculus]
gi|17390830|gb|AAH18355.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Mus
musculus]
Length = 199
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +VRLKLQG+C SCPSS++T+K GI+ L I
Sbjct: 117 IKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYI 176
Query: 146 PEIVAVESVADEE 158
PE+ VE V D++
Sbjct: 177 PEVEGVEQVMDDD 189
>gi|114571567|ref|YP_758247.1| NifU domain-containing protein [Maricaulis maris MCS10]
gi|114342029|gb|ABI67309.1| nitrogen-fixing NifU domain protein [Maricaulis maris MCS10]
Length = 187
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIER 139
L E IE + +RP + DGG++ H D +VRLK++GAC CPSS MT+K GIE
Sbjct: 112 LVKEIIELIDTRVRPAVAQDGGDILFHSYLADSGIVRLKMRGACSGCPSSTMTLKSGIEN 171
Query: 140 RLMEKIPEIVAVESV 154
L IPEI +VE+V
Sbjct: 172 LLKHYIPEIQSVEAV 186
>gi|253575294|ref|ZP_04852632.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251845291|gb|EES73301.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 81
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
+ + VLD++RP+L DGG+V L +++ +V+LKL GACGSCPSS +T+K GIER L
Sbjct: 11 DEVLEVLDKLRPFLQRDGGDVELVDVEDGIVKLKLMGACGSCPSSTITLKAGIERALF 68
>gi|410456834|ref|ZP_11310687.1| nitrogen-fixing NifU domain-containing protein [Bacillus
bataviensis LMG 21833]
gi|409927308|gb|EKN64447.1| nitrogen-fixing NifU domain-containing protein [Bacillus
bataviensis LMG 21833]
Length = 78
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 45/57 (78%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
++ VLD++RP+L+ DGG+ L +++ +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 9 QVQEVLDKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERALL 65
>gi|344283678|ref|XP_003413598.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Loxodonta africana]
Length = 312
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 231 IKELLDTRIRPTVQEDGGDVIFKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 290
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+++
Sbjct: 291 PEVEGVEQVMDDDS 304
>gi|334312031|ref|XP_001381686.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Monodelphis domestica]
Length = 196
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 115 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 174
Query: 146 PEIVAVESVADEE 158
PE+ VE V D+E
Sbjct: 175 PEVEGVEQVVDDE 187
>gi|311747521|ref|ZP_07721306.1| NifU domain protein [Algoriphagus sp. PR1]
gi|126574883|gb|EAZ79254.1| NifU domain protein [Algoriphagus sp. PR1]
Length = 82
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
IE LD IRPYL +DGGNV + E+ + V+R+++ G+CGSCP S MT+K G+E + I
Sbjct: 9 IEFALDTIRPYLEADGGNVRIVELTEDMVLRIEMLGSCGSCPMSSMTLKAGVEDAIKRAI 68
Query: 146 PEIVAVESV 154
PEI VE++
Sbjct: 69 PEITKVEAI 77
>gi|146326964|gb|AAI41716.1| Lpd-8 protein [Xenopus laevis]
Length = 250
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 169 IKELLDTRIRPTVQEDGGDVLYKGFQDGIVQLKLQGSCTSCPSSIITLKSGIQNMLQFYI 228
Query: 146 PEIVAVESVADEE 158
PE+ VE V DE+
Sbjct: 229 PEVEGVEQVTDED 241
>gi|441642027|ref|XP_004090414.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Nomascus leucogenys]
Length = 196
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 115 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 174
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 175 PEVEGVEQVMDDES 188
>gi|332813521|ref|XP_003309120.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Pan troglodytes]
gi|5738608|emb|CAB53015.1| HIRA-interacting protein HIRIP5 [Homo sapiens]
gi|62822279|gb|AAY14828.1| unknown [Homo sapiens]
gi|189054196|dbj|BAG36716.1| unnamed protein product [Homo sapiens]
Length = 196
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 115 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 174
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 175 PEVEGVEQVMDDES 188
>gi|334135290|ref|ZP_08508782.1| NifU-like protein [Paenibacillus sp. HGF7]
gi|333607112|gb|EGL18434.1| NifU-like protein [Paenibacillus sp. HGF7]
Length = 82
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 44/57 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
+ + VLD++RP+L DGG+V L +++ +V+LKL GACGSCPSS +T+K GIER L
Sbjct: 12 DEVLEVLDKLRPFLQRDGGDVELVDVEDGIVKLKLMGACGSCPSSTITLKAGIERAL 68
>gi|355707161|gb|AES02874.1| NFU1 iron-sulfur cluster scaffold-like protein [Mustela putorius
furo]
Length = 202
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 127 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 186
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 187 PEVEGVEQVMDDES 200
>gi|301758232|ref|XP_002914967.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Ailuropoda melanoleuca]
Length = 420
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 339 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 398
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 399 PEVEGVEQVMDDES 412
>gi|296223650|ref|XP_002757718.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Callithrix jacchus]
Length = 235
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 154 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 213
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 214 PEVEGVEQVMDDES 227
>gi|114108171|gb|AAI23134.1| Lpd-8 protein [Xenopus laevis]
Length = 249
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 168 IKELLDTRIRPTVQEDGGDVLYKGFQDGIVQLKLQGSCTSCPSSIITLKSGIQNMLQFYI 227
Query: 146 PEIVAVESVADEE 158
PE+ VE V DE+
Sbjct: 228 PEVEGVEQVTDED 240
>gi|403379426|ref|ZP_10921483.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
JC66]
Length = 81
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 44/57 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
+ + VLD++RP+L DGG+V L +++ +V+LKL GACGSCPSS +T+K GIER L
Sbjct: 11 DEVLEVLDKLRPFLQRDGGDVELVDVEDGIVKLKLMGACGSCPSSTITLKAGIERAL 67
>gi|402891131|ref|XP_003908811.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 3 [Papio anubis]
Length = 196
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 115 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 174
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 175 PEVEGVEQVMDDES 188
>gi|172058330|ref|YP_001814790.1| NifU domain-containing protein [Exiguobacterium sibiricum 255-15]
gi|407477998|ref|YP_006791875.1| nitrogen-fixing NifU domain-containing protein [Exiguobacterium
antarcticum B7]
gi|171990851|gb|ACB61773.1| nitrogen-fixing NifU domain protein [Exiguobacterium sibiricum
255-15]
gi|407062077|gb|AFS71267.1| Nitrogen-fixing NifU domain protein [Exiguobacterium antarcticum
B7]
Length = 75
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
+ + VL+++RP+L+ DGG+V L +++ +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 5 DQVNEVLEKLRPFLLRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALL 62
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAA 206
+ + +VLE++RP+L+ GG +ELV +++ IVK+R+ G
Sbjct: 5 DQVNEVLEKLRPFLL-RDGGDVELVDVEDGIVKLRLMGACG 44
>gi|414155079|ref|ZP_11411395.1| Nitrogen-fixing NifU domain protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411453392|emb|CCO09299.1| Nitrogen-fixing NifU domain protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 74
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/71 (49%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ VL+++RP+L DGG+V + D N VV++KL+GACGSCP ++ T+K GIER L +
Sbjct: 3 EKVKEVLEQVRPFLQRDGGDVEFVDCDENGVVKVKLRGACGSCPGALYTLKNGIERALKQ 62
Query: 144 KIPEIVAVESV 154
+IPE+ V V
Sbjct: 63 QIPEVKEVVRV 73
Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPA----AGVMTVRVAVTQKL 219
+E +++VLE++RP+L GG +E V DE +VKV++ G + T++ + + L
Sbjct: 2 KEKVKEVLEQVRPFL-QRDGGDVEFVDCDENGVVKVKLRGACGSCPGALYTLKNGIERAL 60
Query: 220 REKIPAIAAV 229
+++IP + V
Sbjct: 61 KQQIPEVKEV 70
>gi|348566587|ref|XP_003469083.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Cavia porcellus]
Length = 253
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 172 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 231
Query: 146 PEIVAVESVADEE 158
PE+ VE V D+E
Sbjct: 232 PEVEGVEEVKDDE 244
>gi|84683414|ref|ZP_01011317.1| nifU domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84668157|gb|EAQ14624.1| nifU domain protein [Maritimibacter alkaliphilus HTCC2654]
Length = 186
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + VV L +QGAC CPSS +T+KMGIE L
Sbjct: 115 QIKDLLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLKHY 174
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 175 IPEVTEVRPVA 185
>gi|126734863|ref|ZP_01750609.1| NifU-like domain protein [Roseobacter sp. CCS2]
gi|126715418|gb|EBA12283.1| NifU-like domain protein [Roseobacter sp. CCS2]
Length = 187
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + +V L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFERGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+V V VA
Sbjct: 176 IPEVVEVRPVA 186
>gi|220907771|ref|YP_002483082.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7425]
gi|219864382|gb|ACL44721.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7425]
Length = 296
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 87 IESVL-DEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VL +E+RP L++DGG+V L++++G+VV++ L+GACG+C SS T+K+ IE RL E++
Sbjct: 225 IQQVLTEEVRPVLMADGGDVELYDVEGDVVKVLLKGACGNCSSSTATLKIAIEARLQERV 284
Query: 146 PEIVAVESV 154
+ VE+V
Sbjct: 285 LPSLVVEAV 293
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 13/116 (11%)
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEEN----IEKVL 172
+K G CGSC + + +ER E+ + + +A++ L I++VL
Sbjct: 173 VKAGGGCGSCLVEIEDLIAEVER---ERQVSLQVAQQLANQAPTKPLTTVQKISLIQQVL 229
Query: 173 -EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREKI 223
EE+RP L+ A GG +EL ++ +VKV + G ++ T+++A+ +L+E++
Sbjct: 230 TEEVRPVLM-ADGGDVELYDVEGDVVKVLLKGACGNCSSSTATLKIAIEARLQERV 284
>gi|83943871|ref|ZP_00956328.1| nifU domain protein [Sulfitobacter sp. EE-36]
gi|83953512|ref|ZP_00962234.1| nifU domain protein [Sulfitobacter sp. NAS-14.1]
gi|83842480|gb|EAP81648.1| nifU domain protein [Sulfitobacter sp. NAS-14.1]
gi|83845118|gb|EAP82998.1| nifU domain protein [Sulfitobacter sp. EE-36]
Length = 186
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 176 IPEVTEVRPVA 186
>gi|344250818|gb|EGW06922.1| NFU1 iron-sulfur cluster scaffold-like, mitochondrial [Cricetulus
griseus]
Length = 328
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +VRLKLQG+C SCPSS++T+K GI+ L I
Sbjct: 148 IKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYI 207
Query: 146 PEIVAVESVADEETGLELNEENIEKVLEEIRPYL 179
PE VE V E G + E + + ++ Y+
Sbjct: 208 PE---VEGVEQESKGYDFESETDTETIAKLVKYM 238
>gi|163744246|ref|ZP_02151606.1| NifU-like domain protein [Oceanibulbus indolifex HEL-45]
gi|161381064|gb|EDQ05473.1| NifU-like domain protein [Oceanibulbus indolifex HEL-45]
Length = 186
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 176 IPEVTEVRPVA 186
>gi|225710000|gb|ACO10846.1| NFU1 iron-sulfur cluster scaffold homolog [Caligus rogercresseyi]
Length = 237
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 67 VIKAVATPDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQG 121
++ A P S E+ ++ I+ +LD IRP + DGG++ + +V+LK+QG
Sbjct: 122 IVNEDAKPHSDTEIHEDGDDTVAMIKELLDSRIRPTVQEDGGDIIFMGFEDGIVKLKMQG 181
Query: 122 ACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADE 157
+C SCPSS++T+K G++ L IPE++ VE + DE
Sbjct: 182 SCTSCPSSIVTLKNGVQNMLQFYIPEVIEVEQIFDE 217
>gi|254487441|ref|ZP_05100646.1| NifU domain protein [Roseobacter sp. GAI101]
gi|214044310|gb|EEB84948.1| NifU domain protein [Roseobacter sp. GAI101]
Length = 203
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + VV L +QGAC CPSS +T+KMGIE L
Sbjct: 133 QIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 192
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 193 IPEVTEVRPVA 203
>gi|383458520|ref|YP_005372509.1| NifU family protein [Corallococcus coralloides DSM 2259]
gi|380733603|gb|AFE09605.1| NifU family protein [Corallococcus coralloides DSM 2259]
Length = 186
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I+ +LDE IRP + DGG++ L + +V L ++G+C CPSS T+KMGIE RL E
Sbjct: 116 QRIQVILDEEIRPAVAQDGGDITLDRFEDGIVYLHMKGSCAGCPSSTATLKMGIEGRLRE 175
Query: 144 KIPEIVAVESV 154
IPE+ V SV
Sbjct: 176 MIPEVTEVVSV 186
>gi|345869077|ref|ZP_08821040.1| nifU-like domain protein [Bizionia argentinensis JUB59]
gi|344046561|gb|EGV42222.1| nifU-like domain protein [Bizionia argentinensis JUB59]
Length = 80
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
NIE LDEIRP+L SDGG+++L I DG +VR++L+GAC C + MT+KMG+E + +
Sbjct: 9 NIEKALDEIRPFLQSDGGDISLLSIEDGKLVRVQLEGACVGCSVNQMTLKMGVEMTIKKY 68
Query: 145 IPEIVAVESV 154
P+I V +V
Sbjct: 69 APQIEQVVNV 78
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 167 NIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVTQKLRE 221
NIEK L+EIRP+L + GG + L++I D +V+V++ G G MT+++ V +++
Sbjct: 9 NIEKALDEIRPFL-QSDGGDISLLSIEDGKLVRVQLEGACVGCSVNQMTLKMGVEMTIKK 67
Query: 222 KIPAIAAV 229
P I V
Sbjct: 68 YAPQIEQV 75
>gi|294501686|ref|YP_003565386.1| NifU-like domain-containing protein [Bacillus megaterium QM B1551]
gi|295707034|ref|YP_003600109.1| NifU-like domain-containing protein [Bacillus megaterium DSM 319]
gi|384044478|ref|YP_005492495.1| thioredoxin-like protein [Bacillus megaterium WSH-002]
gi|294351623|gb|ADE71952.1| NifU-like domain protein [Bacillus megaterium QM B1551]
gi|294804693|gb|ADF41759.1| NifU-like domain protein [Bacillus megaterium DSM 319]
gi|345442169|gb|AEN87186.1| Thioredoxin-like protein [Bacillus megaterium WSH-002]
Length = 76
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ VL+++RP+L+ DGG+ L +++ +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 6 EQVQEVLEKLRPFLLRDGGDCELVDVEDGIVKLRLLGACGSCPSSTITLKAGIERALL 63
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAA 206
E +++VLE++RP+L+ GG ELV +++ IVK+R+ G
Sbjct: 6 EQVQEVLEKLRPFLL-RDGGDCELVDVEDGIVKLRLLGACG 45
>gi|195059008|ref|XP_001995543.1| GH17809 [Drosophila grimshawi]
gi|263505270|sp|B4JWR9.1|NFU1_DROGR RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|193896329|gb|EDV95195.1| GH17809 [Drosophila grimshawi]
Length = 298
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 194 IKELLDTRIRPTVQEDGGDIVFISYEKGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 253
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVLEE 174
PE+ +VE V DE + +E E EK L++
Sbjct: 254 PEVESVEQVFDEVDKVANSEFERFEKSLKQ 283
>gi|304317418|ref|YP_003852563.1| nitrogen-fixing NifU domain-containing protein
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433655601|ref|YP_007299309.1| thioredoxin-like protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302778920|gb|ADL69479.1| nitrogen-fixing NifU domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433293790|gb|AGB19612.1| thioredoxin-like protein [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 73
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E VL+ +RP L +DGG+V L ++ D VV++KL GACG CP +VMT+K GIER + E
Sbjct: 3 ERVEEVLNLLRPSLQADGGDVELIDVTDDGVVQVKLTGACGGCPFAVMTLKEGIERAIKE 62
Query: 144 KIPEI 148
++PE+
Sbjct: 63 ELPEV 67
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAG----VMTVRVAVTQKL 219
+E +E+VL +RP L A GG +EL+ + D+ +V+V++TG G VMT++ + + +
Sbjct: 2 KERVEEVLNLLRPSL-QADGGDVELIDVTDDGVVQVKLTGACGGCPFAVMTLKEGIERAI 60
Query: 220 REKIPAIAAV 229
+E++P + V
Sbjct: 61 KEELPEVKEV 70
>gi|386348016|ref|YP_006046265.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta
thermophila DSM 6578]
gi|339412983|gb|AEJ62548.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 74
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERR 140
+T ++E V++EIRP L +DGG++ L E+ + VV+++L GAC CP S +T+K G+E
Sbjct: 1 MTKTDVEKVINEIRPALKADGGDIQLLEVTEQGVVKVRLTGACHGCPMSQITLKQGVEAY 60
Query: 141 LMEKIPEIVAVESV 154
L K+PEI +VE+V
Sbjct: 61 LKRKLPEISSVEAV 74
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAGV----MTVRVAVTQ 217
+ + ++EKV+ EIRP L A GG ++L+ + E +VKVR+TG G +T++ V
Sbjct: 1 MTKTDVEKVINEIRPAL-KADGGDIQLLEVTEQGVVKVRLTGACHGCPMSQITLKQGVEA 59
Query: 218 KLREKIPAIAAVQ 230
L+ K+P I++V+
Sbjct: 60 YLKRKLPEISSVE 72
>gi|410954971|ref|XP_003984132.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 1 [Felis catus]
Length = 253
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 172 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSMITLKNGIQNMLQFYI 231
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 232 PEVEGVEQVMDDES 245
>gi|374609205|ref|ZP_09682002.1| nitrogen-fixing NifU domain protein [Mycobacterium tusciae JS617]
gi|373552945|gb|EHP79548.1| nitrogen-fixing NifU domain protein [Mycobacterium tusciae JS617]
Length = 312
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
IE LD +RPYL S GG+V L E+ +VVRL+ G+C SCPSS +T+++ +E + P
Sbjct: 96 IEDALDGVRPYLGSHGGDVTLLEVVDDVVRLQFSGSCKSCPSSAVTLELTVEDAVRAAAP 155
Query: 147 EIVAVESVADE 157
EI ++E VA E
Sbjct: 156 EIASIEVVAAE 166
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITG-----PAAGVMTVRVAVTQKL 219
E IE L+ +RPYL G+ GG + L+ + + +V+++ +G P++ V T+ + V +
Sbjct: 93 ERRIEDALDGVRPYL-GSHGGDVTLLEVVDDVVRLQFSGSCKSCPSSAV-TLELTVEDAV 150
Query: 220 REKIPAIAAVQLL 232
R P IA+++++
Sbjct: 151 RAAAPEIASIEVV 163
>gi|405355860|ref|ZP_11024972.1| NifU domain protein [Chondromyces apiculatus DSM 436]
gi|397091132|gb|EJJ21959.1| NifU domain protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 188
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD EIRP + DGG++ L + +V L ++G+C CPSS T+KMGIE RL E I
Sbjct: 120 IQDILDSEIRPAVAMDGGDITLDRFEDGIVYLHMKGSCAGCPSSTATLKMGIEGRLREMI 179
Query: 146 PEIVAVESV 154
PE++ V SV
Sbjct: 180 PEVLEVVSV 188
>gi|251798821|ref|YP_003013552.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
JDR-2]
gi|247546447|gb|ACT03466.1| nitrogen-fixing NifU domain protein [Paenibacillus sp. JDR-2]
Length = 80
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 45/58 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
+ + VLD++RP+L DGG+V L +++ +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 10 DEVLDVLDKLRPFLQRDGGDVELVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALL 67
>gi|167520450|ref|XP_001744564.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776895|gb|EDQ90513.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ +V+L+L GAC CPSS+ T+K G+E LM I
Sbjct: 116 IKELLDSRIRPAVQEDGGDILFQGFVDGIVQLRLSGACTGCPSSIFTLKNGVENMLMHYI 175
Query: 146 PEIVAVESVADEE 158
PE+ VE V DEE
Sbjct: 176 PEVEGVEQVFDEE 188
>gi|339504557|ref|YP_004691977.1| NifU-like protein [Roseobacter litoralis Och 149]
gi|338758550|gb|AEI95014.1| NifU-like protein [Roseobacter litoralis Och 149]
Length = 187
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 176 IPEVTEVRPVA 186
>gi|110678955|ref|YP_681962.1| NifU-like domain-containing protein [Roseobacter denitrificans OCh
114]
gi|109455071|gb|ABG31276.1| NifU-like domain protein [Roseobacter denitrificans OCh 114]
Length = 187
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 176 IPEVTEVRPVA 186
>gi|338532886|ref|YP_004666220.1| NifU family protein [Myxococcus fulvus HW-1]
gi|337258982|gb|AEI65142.1| NifU family protein [Myxococcus fulvus HW-1]
Length = 188
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD EIRP + DGG++ L + +V L ++G+C CPSS T+KMGIE RL E I
Sbjct: 120 IQDILDSEIRPAVAMDGGDITLDRFEDGIVYLHMKGSCAGCPSSTATLKMGIEGRLREMI 179
Query: 146 PEIVAVESV 154
PE++ V SV
Sbjct: 180 PEVLEVVSV 188
>gi|195559882|ref|XP_002077376.1| GD12677 [Drosophila simulans]
gi|194202482|gb|EDX16058.1| GD12677 [Drosophila simulans]
Length = 175
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 74 IKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 133
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVLEEIRPYLVGAAGG 185
PE+ +VE V DE + +E E EK L+ ++ G +GG
Sbjct: 134 PEVESVEQVFDEADRMIDSEFERFEKNLKTLKQQ--GPSGG 172
>gi|407768119|ref|ZP_11115498.1| putative iron-sulfur cluster scaffold, NifU-like protein
[Thalassospira xiamenensis M-5 = DSM 17429]
gi|407288832|gb|EKF14309.1| putative iron-sulfur cluster scaffold, NifU-like protein
[Thalassospira xiamenensis M-5 = DSM 17429]
Length = 189
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 8/107 (7%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLD-EIRPYLISDGGNVAL 107
++S + +L + GAA A D EL I+ +LD +RP + DGG++
Sbjct: 87 YTSGQPVLDQNSGAA----TGASTASDGDDEL---VSQIKELLDTRVRPAVAQDGGDIVF 139
Query: 108 HEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 154
H+ + VV L++ GAC CPSS T+KMGIE L +PE+ AVE V
Sbjct: 140 HKFEDGVVFLEMHGACSGCPSSTATLKMGIENMLRYYVPEVQAVEPV 186
>gi|328773127|gb|EGF83164.1| hypothetical protein BATDEDRAFT_9276 [Batrachochytrium
dendrobatidis JAM81]
Length = 225
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 70 AVATPDSAIELPLTAEN---IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGS 125
A P + LP +E I+ +LD IRP + DGG++ VRLKL+GAC +
Sbjct: 107 AFEGPTDTMILPEDSETVAMIKELLDTRIRPTIQEDGGDIEYMGFVNGAVRLKLRGACRT 166
Query: 126 CPSSVMTMKMGIERRLMEKIPEIVAVESVADE 157
C SSV+T+K GIE LM IPE+ AVE V D+
Sbjct: 167 CDSSVVTLKNGIENMLMHYIPEVTAVEQVLDD 198
>gi|198427432|ref|XP_002130447.1| PREDICTED: similar to NFU1 iron-sulfur cluster scaffold homolog (S.
cerevisiae) [Ciona intestinalis]
Length = 284
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNV--VRLKLQGACGSCPSSVMTMKMGIERRLME 143
++ +LD IRP ++ DGG++ D V+LKLQG+C +CPSS +T+K GIE L
Sbjct: 188 VKELLDTRIRPTVMEDGGDIIFKGFDPETGSVKLKLQGSCSNCPSSSVTLKSGIENMLKF 247
Query: 144 KIPEIVAVESVADEETGLELNEENIEKVLEEIR 176
IPE++ VE V DE E+++ +K+ ++IR
Sbjct: 248 YIPEVMEVEEVKDESD--EVSDREFQKLEDQIR 278
>gi|114764450|ref|ZP_01443675.1| nifU domain protein [Pelagibaca bermudensis HTCC2601]
gi|114543017|gb|EAU46036.1| nifU domain protein [Roseovarius sp. HTCC2601]
Length = 186
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + VV L +QGAC CPSS +T+KMGIE L
Sbjct: 115 QIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 175 IPEVTEVRPVA 185
>gi|442323584|ref|YP_007363605.1| NifU family protein [Myxococcus stipitatus DSM 14675]
gi|441491226|gb|AGC47921.1| NifU family protein [Myxococcus stipitatus DSM 14675]
Length = 188
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I VLD EIRP + DGG++ L + +V L ++G+C CPSS T+KMGIE RL E I
Sbjct: 120 IREVLDAEIRPAVAMDGGDITLDRFEDGIVYLHMKGSCAGCPSSTATLKMGIEGRLREII 179
Query: 146 PEIVAVESV 154
PE+V V SV
Sbjct: 180 PEVVEVVSV 188
>gi|85705721|ref|ZP_01036818.1| nifU domain protein [Roseovarius sp. 217]
gi|85669711|gb|EAQ24575.1| nifU domain protein [Roseovarius sp. 217]
Length = 187
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFDRGVVYLHMQGACAGCPSSTITLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+ V V
Sbjct: 176 IPEVTEVRPVG 186
>gi|118403546|ref|NP_001072356.1| NFU1 iron-sulfur cluster scaffold homolog [Xenopus (Silurana)
tropicalis]
gi|111307911|gb|AAI21453.1| HIRA interacting protein 5 [Xenopus (Silurana) tropicalis]
Length = 199
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 116 IKELLDTRIRPTVQEDGGDVLYKGFQDGIVQLKLQGSCTSCPSSIITLKSGIQNMLQFYI 175
Query: 146 PEIVAVESVADEE 158
PE+ VE V DE+
Sbjct: 176 PEVEGVEQVTDED 188
>gi|333993050|ref|YP_004525663.1| hypothetical protein TREAZ_2274 [Treponema azotonutricium ZAS-9]
gi|333735255|gb|AEF81204.1| conserved domain protein [Treponema azotonutricium ZAS-9]
Length = 74
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E I+S LD +RP L +DGG+V +D +V LKL GACG CP + MT+KMGIE L +
Sbjct: 4 EQIKSALDNVRPSLQADGGDVEFVGVDEEGIVSLKLTGACGGCPMAQMTLKMGIESYLKK 63
Query: 144 KIPEIVAVESV 154
+IPE+ +V V
Sbjct: 64 EIPEVSSVVGV 74
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAGV----MTVRVAVTQKL 219
EE I+ L+ +RP L A GG +E V +DE IV +++TG G MT+++ + L
Sbjct: 3 EEQIKSALDNVRPSLQ-ADGGDVEFVGVDEEGIVSLKLTGACGGCPMAQMTLKMGIESYL 61
Query: 220 REKIPAIAAV 229
+++IP +++V
Sbjct: 62 KKEIPEVSSV 71
>gi|410925765|ref|XP_003976350.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Takifugu rubripes]
Length = 196
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 117 IKELLDTRIRPTVQEDGGDVLYRGFEDGIVKLKLQGSCTSCPSSIITLKSGIQNMLQFYI 176
Query: 146 PEIVAVESVADEE 158
PE+ +VE V D E
Sbjct: 177 PEVESVEQVKDRE 189
>gi|260426420|ref|ZP_05780399.1| scaffold protein Nfu/NifU [Citreicella sp. SE45]
gi|260420912|gb|EEX14163.1| scaffold protein Nfu/NifU [Citreicella sp. SE45]
Length = 185
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + VV L +QGAC CPSS +T+KMGIE L
Sbjct: 115 QIKELLDSRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 174
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 175 IPEVTEVRPVA 185
>gi|225711062|gb|ACO11377.1| NFU1 iron-sulfur cluster scaffold homolog [Caligus rogercresseyi]
Length = 237
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 67 VIKAVATPDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQG 121
++ A P S E+ ++ I+ +LD IRP + DGG++ + +V+LK+QG
Sbjct: 122 IVNEDAKPHSDTEIHEDDDDTVAMIKELLDSRIRPTVQEDGGDIIFMGFEDGIVKLKMQG 181
Query: 122 ACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADE 157
+C SCPSS++T+K G++ L IPE++ VE + DE
Sbjct: 182 SCTSCPSSIVTLKNGVQNMLQFYIPEVIEVEQIFDE 217
>gi|409050888|gb|EKM60364.1| hypothetical protein PHACADRAFT_189498 [Phanerochaete carnosa
HHB-10118-sp]
Length = 218
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 41 TRWR--NPVCHSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAEN---IESVLD-EI 94
T W P +S+ + R +A A P L +E I+ +LD +
Sbjct: 69 TSWAVIKPEVYSNLMEFFSSGQPLFRSEEDRAAAGPQDTRILDTDSETVAMIKELLDTRV 128
Query: 95 RPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
RP + DGG++ + D +V +KL+G+C C SS +T+K GIER LM IPE+ VE
Sbjct: 129 RPAIQEDGGDLEYRDFTDEGIVHVKLKGSCRGCDSSTVTLKSGIERMLMHYIPEVKGVEQ 188
Query: 154 VADEETGLELNE-ENIEKVL 172
+ D+E + L E E +EK L
Sbjct: 189 ILDQEEQIALEEFEKLEKKL 208
>gi|431798708|ref|YP_007225612.1| thioredoxin-like protein [Echinicola vietnamensis DSM 17526]
gi|430789473|gb|AGA79602.1| thioredoxin-like protein [Echinicola vietnamensis DSM 17526]
Length = 83
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
IE LD IRPYL +DGGNV + ++ D V++L+L G C SCP S MT+K G+E + + I
Sbjct: 9 IEKALDTIRPYLEADGGNVKIVDLTDEMVLQLELTGTCSSCPMSTMTLKAGVEEAVKKAI 68
Query: 146 PEIVAVESV 154
PEI VE++
Sbjct: 69 PEINRVEAI 77
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
Query: 168 IEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKLREK 222
IEK L+ IRPYL A GG++++V + DE ++++ +TG + MT++ V + +++
Sbjct: 9 IEKALDTIRPYL-EADGGNVKIVDLTDEMVLQLELTGTCSSCPMSTMTLKAGVEEAVKKA 67
Query: 223 IPAIAAVQ 230
IP I V+
Sbjct: 68 IPEINRVE 75
>gi|294678745|ref|YP_003579360.1| NifU domain-containing protein [Rhodobacter capsulatus SB 1003]
gi|294477565|gb|ADE86953.1| NifU domain protein [Rhodobacter capsulatus SB 1003]
Length = 188
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + VV L +QGAC CPSS T+KMGIE L
Sbjct: 117 QIKELLDTRVRPAVARDGGDITFHGFEKGVVYLHMQGACAGCPSSTYTLKMGIENLLRHY 176
Query: 145 IPEIVAVESVA 155
IPE+ V +VA
Sbjct: 177 IPEVSEVRAVA 187
>gi|387017300|gb|AFJ50768.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Crotalus
adamanteus]
Length = 248
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 168 IKELLDTRIRPTVQEDGGDVIFKGFEDGIVQLKLQGSCTSCPSSIVTLKNGIQNMLQFYI 227
Query: 146 PEIVAVESVADE 157
PE+ VE V D+
Sbjct: 228 PEVEGVEQVVDD 239
>gi|374608238|ref|ZP_09681037.1| nitrogen-fixing NifU domain protein [Mycobacterium tusciae JS617]
gi|373553770|gb|EHP80357.1| nitrogen-fixing NifU domain protein [Mycobacterium tusciae JS617]
Length = 312
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
IE LD +RPYL S GG+V L E+ +VVRL+ G+C SCPSS +T+++ +E + P
Sbjct: 96 IEDALDGVRPYLGSHGGDVTLLEVVDDVVRLQFAGSCKSCPSSAVTLELTVEDAVRAAAP 155
Query: 147 EIVAVESVADE 157
EI ++E VA E
Sbjct: 156 EIASIEVVAAE 166
>gi|410932901|ref|XP_003979831.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like, partial [Takifugu rubripes]
Length = 153
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 74 IKELLDTRIRPTVQEDGGDVLYRGFEDGIVKLKLQGSCTSCPSSIITLKSGIQNMLQFYI 133
Query: 146 PEIVAVESVADEE 158
PE+ +VE V D E
Sbjct: 134 PEVESVEQVKDRE 146
>gi|410583627|ref|ZP_11320732.1| thioredoxin-like protein [Thermaerobacter subterraneus DSM 13965]
gi|410504489|gb|EKP93999.1| thioredoxin-like protein [Thermaerobacter subterraneus DSM 13965]
Length = 73
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E L+ IRP + DGG++ L ++D N VVR++L GAC CP S+MT+K GIER L E
Sbjct: 3 EQVEQALESIRPAIQMDGGDIELVDVDENGVVRVRLIGACVGCPMSIMTLKAGIERILRE 62
Query: 144 KIPEIVAVESV 154
++P + VE+V
Sbjct: 63 RVPGVTDVEAV 73
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDE-PIVKVRITGPAAG----VMTVRVAVTQKLR 220
E +E+ LE IRP + GG +ELV +DE +V+VR+ G G +MT++ + + LR
Sbjct: 3 EQVEQALESIRPA-IQMDGGDIELVDVDENGVVRVRLIGACVGCPMSIMTLKAGIERILR 61
Query: 221 EKIPAIAAVQ 230
E++P + V+
Sbjct: 62 ERVPGVTDVE 71
>gi|444911332|ref|ZP_21231507.1| NifU protein [Cystobacter fuscus DSM 2262]
gi|444718090|gb|ELW58906.1| NifU protein [Cystobacter fuscus DSM 2262]
Length = 187
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD EIRP + DGG++ L + +V L ++G+C CPSS T+KMGIE RL E +
Sbjct: 119 IQEILDAEIRPAVAQDGGDITLDRFEEGIVYLHMKGSCAGCPSSTATLKMGIETRLRELV 178
Query: 146 PEIVAVESV 154
PE+ V SV
Sbjct: 179 PEVTEVVSV 187
>gi|340054523|emb|CCC48821.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 279
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP L +DGGNV ++D V + L+GAC SCPSS +T+K GIER LM IPE+V V+
Sbjct: 191 IRPLLRADGGNVRYIDMDDGTVFVLLEGACKSCPSSSVTLKSGIERMLMHWIPEVVEVQE 250
Query: 154 VADEETGLELNEENIEKVLEE 174
+E L E+ + L++
Sbjct: 251 CTEEMASDLLAEKALRAKLKK 271
>gi|333999679|ref|YP_004532291.1| iron-sulfur cluster-binding protein, Rieske family [Treponema
primitia ZAS-2]
gi|333740023|gb|AEF85513.1| iron-sulfur cluster-binding protein, Rieske family [Treponema
primitia ZAS-2]
Length = 74
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ LD +RP L +DGG+V + D V LKL GACGSCP + MT+KMGIE L +
Sbjct: 4 EQVKLALDNVRPSLQNDGGDVEFVSLSDDGTVSLKLTGACGSCPMAQMTLKMGIENYLKK 63
Query: 144 KIPEIVAVESV 154
+IPE+ AV V
Sbjct: 64 EIPEVKAVVGV 74
>gi|338714224|ref|XP_003363028.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Equus caballus]
Length = 113
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 32 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 91
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 92 PEVEGVEQVMDDES 105
>gi|195392814|ref|XP_002055049.1| GJ19011 [Drosophila virilis]
gi|263505537|sp|B4M375.1|NFU1_DROVI RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194149559|gb|EDW65250.1| GJ19011 [Drosophila virilis]
Length = 298
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + +V+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 190 IKELLDTRIRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 249
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVL 172
PE+ +VE V D+ + E E EK L
Sbjct: 250 PEVESVEQVFDDADKMANKEFERFEKSL 277
>gi|42525980|ref|NP_971078.1| NifU family protein [Treponema denticola ATCC 35405]
gi|449107769|ref|ZP_21744416.1| hypothetical protein HMPREF9722_00112 [Treponema denticola ATCC
33520]
gi|449112889|ref|ZP_21749435.1| hypothetical protein HMPREF9735_02484 [Treponema denticola ATCC
33521]
gi|449114895|ref|ZP_21751363.1| hypothetical protein HMPREF9721_01881 [Treponema denticola ATCC
35404]
gi|449117472|ref|ZP_21753889.1| hypothetical protein HMPREF9726_01874 [Treponema denticola H-22]
gi|449118456|ref|ZP_21754865.1| hypothetical protein HMPREF9725_00330 [Treponema denticola H1-T]
gi|449123598|ref|ZP_21759923.1| hypothetical protein HMPREF9727_02683 [Treponema denticola MYR-T]
gi|449127181|ref|ZP_21763455.1| hypothetical protein HMPREF9733_00858 [Treponema denticola SP33]
gi|41816030|gb|AAS10959.1| NifU domain protein [Treponema denticola ATCC 35405]
gi|448944849|gb|EMB25726.1| hypothetical protein HMPREF9733_00858 [Treponema denticola SP33]
gi|448945422|gb|EMB26294.1| hypothetical protein HMPREF9727_02683 [Treponema denticola MYR-T]
gi|448950673|gb|EMB31494.1| hypothetical protein HMPREF9726_01874 [Treponema denticola H-22]
gi|448952833|gb|EMB33630.1| hypothetical protein HMPREF9725_00330 [Treponema denticola H1-T]
gi|448954338|gb|EMB35120.1| hypothetical protein HMPREF9721_01881 [Treponema denticola ATCC
35404]
gi|448955006|gb|EMB35774.1| hypothetical protein HMPREF9735_02484 [Treponema denticola ATCC
33521]
gi|448962720|gb|EMB43407.1| hypothetical protein HMPREF9722_00112 [Treponema denticola ATCC
33520]
Length = 75
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEID-GNVVRLKLQGACGSCPSSVMTMKMGIERR 140
L E IE + +RPYL +DGG++ L +D V +KL+GACGSCP ++ T+KMG+E +
Sbjct: 2 LVKEEIEKGIALVRPYLQADGGDIELDSVDEAGKVYVKLKGACGSCPMAIYTLKMGVEEQ 61
Query: 141 LMEKIPEIVAVESV 154
L + PE+ V +V
Sbjct: 62 LKDMFPEVTEVVAV 75
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAA----GVMTVRVAVTQ 217
L +E IEK + +RPYL A GG +EL ++DE V V++ G + T+++ V +
Sbjct: 2 LVKEEIEKGIALVRPYL-QADGGDIELDSVDEAGKVYVKLKGACGSCPMAIYTLKMGVEE 60
Query: 218 KLREKIPAIAAV 229
+L++ P + V
Sbjct: 61 QLKDMFPEVTEV 72
>gi|422340499|ref|ZP_16421440.1| NifU domain-containing protein [Treponema denticola F0402]
gi|449103554|ref|ZP_21740299.1| hypothetical protein HMPREF9730_01196 [Treponema denticola AL-2]
gi|449106415|ref|ZP_21743081.1| hypothetical protein HMPREF9729_01346 [Treponema denticola ASLM]
gi|449125267|ref|ZP_21761569.1| hypothetical protein HMPREF9723_01613 [Treponema denticola OTK]
gi|449130284|ref|ZP_21766505.1| hypothetical protein HMPREF9724_01170 [Treponema denticola SP37]
gi|451968124|ref|ZP_21921353.1| hypothetical protein HMPREF9728_00524 [Treponema denticola US-Trep]
gi|325475673|gb|EGC78849.1| NifU domain-containing protein [Treponema denticola F0402]
gi|448939236|gb|EMB20153.1| hypothetical protein HMPREF9723_01613 [Treponema denticola OTK]
gi|448943123|gb|EMB24016.1| hypothetical protein HMPREF9724_01170 [Treponema denticola SP37]
gi|448964708|gb|EMB45376.1| hypothetical protein HMPREF9730_01196 [Treponema denticola AL-2]
gi|448964928|gb|EMB45594.1| hypothetical protein HMPREF9729_01346 [Treponema denticola ASLM]
gi|451703081|gb|EMD57463.1| hypothetical protein HMPREF9728_00524 [Treponema denticola US-Trep]
Length = 75
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEID-GNVVRLKLQGACGSCPSSVMTMKMGIERR 140
L E +E + IRPYL +DGG++ L +D V +KL+GACGSCP ++ T+KMG+E +
Sbjct: 2 LVKEEVEKGIALIRPYLQADGGDIELDSVDEAGKVYVKLKGACGSCPMAIYTLKMGVEEQ 61
Query: 141 LMEKIPEIVAVESV 154
L + PE+ V +V
Sbjct: 62 LKDMFPEVTEVVAV 75
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAA----GVMTVRVAVTQ 217
L +E +EK + IRPYL A GG +EL ++DE V V++ G + T+++ V +
Sbjct: 2 LVKEEVEKGIALIRPYL-QADGGDIELDSVDEAGKVYVKLKGACGSCPMAIYTLKMGVEE 60
Query: 218 KLREKIPAIAAV 229
+L++ P + V
Sbjct: 61 QLKDMFPEVTEV 72
>gi|50593023|ref|NP_001002756.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 3
[Homo sapiens]
gi|114577881|ref|XP_001137265.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 3 [Pan troglodytes]
gi|114577883|ref|XP_001137343.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 4 [Pan troglodytes]
gi|114577885|ref|XP_001137421.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 5 [Pan troglodytes]
gi|332226736|ref|XP_003262548.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 4 [Nomascus leucogenys]
gi|332226738|ref|XP_003262549.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 5 [Nomascus leucogenys]
gi|332226740|ref|XP_003262550.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 6 [Nomascus leucogenys]
gi|402891133|ref|XP_003908812.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 4 [Papio anubis]
gi|402891135|ref|XP_003908813.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 5 [Papio anubis]
gi|402891137|ref|XP_003908814.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 6 [Papio anubis]
Length = 113
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 32 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 91
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 92 PEVEGVEQVMDDES 105
>gi|430745248|ref|YP_007204377.1| thioredoxin-like protein [Singulisphaera acidiphila DSM 18658]
gi|430016968|gb|AGA28682.1| thioredoxin-like protein [Singulisphaera acidiphila DSM 18658]
Length = 193
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 25/138 (18%)
Query: 40 LTRWRNPVCHSSCRLL---LIRKRGAARRNVIK--AVATPDSAIELPLTAEN-------- 86
+ R+ +PV R + L+ GAA N++ AVA P L AE+
Sbjct: 22 IERFADPVVQGQAREIVQALLEFHGAALANLVGQIAVAGPPGRAILEQAAEDELTSSLLL 81
Query: 87 ------------IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMK 134
+ LD++RP L + GG+V L IDG+VVRL++QG+C CPSS T++
Sbjct: 82 LHGLHPHDLETRVAQALDQVRPQLHTHGGDVELLGIDGDVVRLRMQGSCHGCPSSAATLR 141
Query: 135 MGIERRLMEKIPEIVAVE 152
IE + P++ ++E
Sbjct: 142 QTIETAIFGAAPDVASIE 159
>gi|242278148|ref|YP_002990277.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
salexigens DSM 2638]
gi|242121042|gb|ACS78738.1| nitrogen-fixing NifU domain protein [Desulfovibrio salexigens DSM
2638]
Length = 74
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ +E+ LD++RP L +DGGNV L E+ D + +++LQGAC CP S +T++ IER L++
Sbjct: 3 DKVEAALDKVRPLLQADGGNVELVEVTDKGIAKVRLQGACKGCPMSQITLRNAIERTLLK 62
Query: 144 KIPEIVAVE 152
+IPE+ VE
Sbjct: 63 EIPELKGVE 71
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVTQKLR 220
+ +E L+++RP L+ A GG++ELV + D+ I KVR+ G G +T+R A+ + L
Sbjct: 3 DKVEAALDKVRP-LLQADGGNVELVEVTDKGIAKVRLQGACKGCPMSQITLRNAIERTLL 61
Query: 221 EKIPAIAAVQ 230
++IP + V+
Sbjct: 62 KEIPELKGVE 71
>gi|254461257|ref|ZP_05074673.1| NifU domain protein [Rhodobacterales bacterium HTCC2083]
gi|206677846|gb|EDZ42333.1| NifU domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 188
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + +V L +QGAC CPSS +T+KMGIE L
Sbjct: 117 QIKELLDSRVRPAVAQDGGDITFHGFERGIVYLHMQGACAGCPSSTLTLKMGIENLLRHY 176
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 177 IPEVTEVRPVA 187
>gi|321470871|gb|EFX81846.1| hypothetical protein DAPPUDRAFT_49825 [Daphnia pulex]
Length = 206
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ +V LKLQG+C SCPSS++T+K G++ L I
Sbjct: 116 IKELLDSRIRPTVQEDGGDLVFKGFKDGIVYLKLQGSCTSCPSSMVTLKNGVQNMLQFYI 175
Query: 146 PEIVAVESVADEETGLELNEE 166
PE++AVE V ++E + EE
Sbjct: 176 PEVIAVEQVLEDELDKKAKEE 196
>gi|108799109|ref|YP_639306.1| nitrogen-fixing NifU-like protein [Mycobacterium sp. MCS]
gi|119868224|ref|YP_938176.1| NifU domain-containing protein [Mycobacterium sp. KMS]
gi|108769528|gb|ABG08250.1| nitrogen-fixing NifU-like protein [Mycobacterium sp. MCS]
gi|119694313|gb|ABL91386.1| nitrogen-fixing NifU domain protein [Mycobacterium sp. KMS]
Length = 294
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
I LD +RPYL S GG+V L +DG+ RL+ G+C SCPSS +T+++ +E + P
Sbjct: 99 ITDALDTVRPYLGSHGGDVHLLGVDGDTARLRFAGSCKSCPSSAVTLELAVEDAIRAAAP 158
Query: 147 EIVAVESVADE 157
EI +E VA+E
Sbjct: 159 EIETIEVVAEE 169
>gi|426223400|ref|XP_004005863.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Ovis aries]
Length = 113
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 32 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 91
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 92 PEVEGVEQVMDDES 105
>gi|225010130|ref|ZP_03700602.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-3C]
gi|225005609|gb|EEG43559.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-3C]
Length = 79
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 49/72 (68%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ +E LDEIRP+L SDGG++AL I+GN V+++L GAC C + MT+K G+E + +
Sbjct: 8 QQVEKALDEIRPFLQSDGGDIALEGIEGNTVKVRLMGACVGCSVNQMTLKSGVELTIKKY 67
Query: 145 IPEIVAVESVAD 156
P+I V ++ D
Sbjct: 68 APQIEQVINLED 79
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGV----MTVRVAVTQKLRE 221
+ +EK L+EIRP+L + GG + L I+ VKVR+ G G MT++ V +++
Sbjct: 8 QQVEKALDEIRPFL-QSDGGDIALEGIEGNTVKVRLMGACVGCSVNQMTLKSGVELTIKK 66
Query: 222 KIPAIAAV 229
P I V
Sbjct: 67 YAPQIEQV 74
>gi|333896678|ref|YP_004470552.1| nitrogen-fixing NifU domain-containing protein
[Thermoanaerobacterium xylanolyticum LX-11]
gi|390935553|ref|YP_006393058.1| nitrogen-fixing NifU domain-containing protein
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|333111943|gb|AEF16880.1| nitrogen-fixing NifU domain-containing protein
[Thermoanaerobacterium xylanolyticum LX-11]
gi|389571054|gb|AFK87459.1| nitrogen-fixing NifU domain-containing protein
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 73
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E VL +RP L +DGG+V L ++ D VV+++L GACG CP +VMT+K GIER + E
Sbjct: 3 ERVEEVLKLLRPSLQADGGDVELVDVTDDGVVQVRLTGACGGCPFAVMTLKEGIERAIKE 62
Query: 144 KIPEI 148
+IPE+
Sbjct: 63 EIPEV 67
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAG----VMTVRVAVTQKLR 220
E +E+VL+ +RP L A GG +ELV + D+ +V+VR+TG G VMT++ + + ++
Sbjct: 3 ERVEEVLKLLRPSL-QADGGDVELVDVTDDGVVQVRLTGACGGCPFAVMTLKEGIERAIK 61
Query: 221 EKIPAIAAV 229
E+IP + V
Sbjct: 62 EEIPEVKEV 70
>gi|238486392|ref|XP_002374434.1| NifU-related protein [Aspergillus flavus NRRL3357]
gi|317144282|ref|XP_003189583.1| nifU-related protein [Aspergillus oryzae RIB40]
gi|220699313|gb|EED55652.1| NifU-related protein [Aspergillus flavus NRRL3357]
Length = 329
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ L + +V LKL+GAC +C SS +T+K GIE LM I E+ VE
Sbjct: 228 IRPAIQEDGGDIELRGFENGIVMLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVQGVEQ 287
Query: 154 VADEETGLELNEENIEKVLEEIRPYLVGAAGGS 186
V DEE + ++E K E++R AA S
Sbjct: 288 VMDEEEEISMHE--FAKFEEKLRQQKGAAATAS 318
>gi|407420833|gb|EKF38692.1| hypothetical protein MOQ_001104 [Trypanosoma cruzi marinkellei]
Length = 280
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP L +DGGNV ++D V + L+GAC SCPS+ +T+K GIER LM IPE+V V+
Sbjct: 192 IRPMLQADGGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGIERMLMHWIPEVVEVQE 251
Query: 154 VADEETGLELNEENIEKVLEE 174
+E L E+ + K +++
Sbjct: 252 CTEEMADDILAEKALRKKMKD 272
>gi|407853600|gb|EKG06508.1| hypothetical protein TCSYLVIO_002386 [Trypanosoma cruzi]
Length = 280
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP L +DGGNV ++D V + L+GAC SCPS+ +T+K GIER LM IPE+V V+
Sbjct: 192 IRPMLQADGGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGIERMLMHWIPEVVEVQE 251
Query: 154 VADEETGLELNEENIEKVLEE 174
+E L E+ + K +++
Sbjct: 252 CTEEMADDILAEKALRKKMKD 272
>gi|156389173|ref|XP_001634866.1| predicted protein [Nematostella vectensis]
gi|156221954|gb|EDO42803.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ +V+LK+QGAC SCPSS++T+K GIE + I
Sbjct: 115 IKELLDTRIRPTVQEDGGDIIFKGFKDGIVKLKMQGACASCPSSIVTLKNGIENMMQFYI 174
Query: 146 PEIVAVESV 154
PE+V+VE V
Sbjct: 175 PEVVSVEQV 183
>gi|114769272|ref|ZP_01446898.1| nifU domain protein [Rhodobacterales bacterium HTCC2255]
gi|114550189|gb|EAU53070.1| nifU domain protein [Rhodobacterales bacterium HTCC2255]
Length = 186
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + +V L +QGAC CPSS +T+KMGIE L
Sbjct: 115 QIKDLLDTRVRPAVAQDGGDITFHGFERGIVYLHMQGACAGCPSSTITLKMGIENLLRHY 174
Query: 145 IPEIVAVESVA 155
IPE+ V VA
Sbjct: 175 IPEVTEVRPVA 185
>gi|71654974|ref|XP_816097.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881201|gb|EAN94246.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 280
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP L +DGGNV ++D V + L+GAC SCPS+ +T+K GIER LM IPE+V V+
Sbjct: 192 IRPMLQADGGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGIERMLMHWIPEVVEVQE 251
Query: 154 VADEETGLELNEENIEKVLEE 174
+E L E+ + K +++
Sbjct: 252 CTEEMADDILAEKALRKKMKD 272
>gi|345486124|ref|XP_003425407.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Nasonia vitripennis]
Length = 278
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + +V+LK+QG+C SCPSSV+T+K G++ + I
Sbjct: 183 IKELLDTRIRPTVQEDGGDIVFMGFENGIVKLKMQGSCTSCPSSVVTLKNGVQNMMQFYI 242
Query: 146 PEIVAVESVAD-----EETGLELNEENIEKVLEE 174
PE++ VE V D +T E E+ +E +E
Sbjct: 243 PEVLGVEQVEDATDKISKTEFEKLEQKVEGTTKE 276
>gi|353237443|emb|CCA69416.1| related to NFU-1 protein (iron homeostasis) [Piriformospora indica
DSM 11827]
Length = 261
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 33 FFG------ERVSLTRWR--NPVCHSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTA 84
FFG +VS T W P +S+ K+ R + +A P L +
Sbjct: 100 FFGPDFVTVSKVSDTPWSIVKPEIYSTLMEFFTSKQPLFRTEEERNLAGPQDTRILDTDS 159
Query: 85 ENI----ESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERR 140
E + E + +RP ++ DGG++ + V++KL+G+C C SS +T+K GIE
Sbjct: 160 ETVAMIKELLETRVRPAIMEDGGDIEYRGFEDGTVKVKLKGSCRGCDSSTVTLKNGIENM 219
Query: 141 LMEKIPEIVAVESVADEETGLELNE-ENIEKVLEE 174
+ IPE+ VE V D+E + L+E E LE+
Sbjct: 220 MRHYIPEVQRVEQVLDQEEAIALDEFSKFEAKLEQ 254
>gi|71662836|ref|XP_818418.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70883670|gb|EAN96567.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 280
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP L +DGGNV ++D V + L+GAC SCPS+ +T+K GIER LM IPE+V V+
Sbjct: 192 IRPMLQADGGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGIERMLMHWIPEVVEVQE 251
Query: 154 VADEETGLELNEENIEKVLEE 174
+E L E+ + K +++
Sbjct: 252 CTEEMADDILAEKALRKKMKD 272
>gi|436840248|ref|YP_007324626.1| Nitrogen-fixing NifU domain protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432169154|emb|CCO22520.1| Nitrogen-fixing NifU domain protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 74
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ +E+ LD++RP L +DGGNV L E+ D + ++++QGAC CP S +T++ IER L++
Sbjct: 3 DKVEAALDKVRPLLQADGGNVELVEVTDNGIAKVRMQGACKGCPMSQITLRNAIERTLLK 62
Query: 144 KIPEIVAVE 152
+IPE+ VE
Sbjct: 63 EIPELKGVE 71
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVTQKLR 220
+ +E L+++RP L+ A GG++ELV + D I KVR+ G G +T+R A+ + L
Sbjct: 3 DKVEAALDKVRP-LLQADGGNVELVEVTDNGIAKVRMQGACKGCPMSQITLRNAIERTLL 61
Query: 221 EKIPAIAAVQ 230
++IP + V+
Sbjct: 62 KEIPELKGVE 71
>gi|408674919|ref|YP_006874667.1| nitrogen-fixing NifU domain-containing protein [Emticicia
oligotrophica DSM 17448]
gi|387856543|gb|AFK04640.1| nitrogen-fixing NifU domain-containing protein [Emticicia
oligotrophica DSM 17448]
Length = 82
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVV-RLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E+ L+ +RPYL +DGGNV + E+ ++ +++L GACG+CP S MT K G+E +++
Sbjct: 6 EKVENALNSVRPYLQTDGGNVRVVEVTEDLTAKIELLGACGTCPMSSMTFKAGLEEAILK 65
Query: 144 KIPEIVAVESV 154
+PEI VE++
Sbjct: 66 AVPEIKKVEAL 76
>gi|452990514|emb|CCQ98304.1| Rieske (2Fe-2S) domain-containing protein [Clostridium ultunense
Esp]
Length = 284
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 23/175 (13%)
Query: 57 IRKRGAARRNVIKAVATPD-------SAIELPLTAENIESVLDEIRPYLISDGGNVALHE 109
R+ A + ++KAV P I P + +VL+E+RPY+ S GG+V L +
Sbjct: 57 FRESDAGKELLLKAVEDPAVYAMFLMHGIIKPDLFTRVAAVLEEVRPYMRSHGGDVELVK 116
Query: 110 IDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV-------------AD 156
++G V ++LQGAC C S +T+K G+E + ++PEI V V AD
Sbjct: 117 VEGETVYVRLQGACSGCYLSAVTLKNGVEEAIKARLPEIAYVVMVEEEVASGYLPPHAAD 176
Query: 157 EETGLELN---EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGV 208
LE N + + LEE RP+ G + +V I+ ++ R P G+
Sbjct: 177 PAGVLEQNGWLQGPAVRELEEGRPFRFAREEGDILVVRIEGKVMAFRNQCPHMGM 231
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 168 IEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAG----VMTVRVAVTQKLREKI 223
+ VLEE+RPY+ + GG +ELV ++ V VR+ G +G +T++ V + ++ ++
Sbjct: 94 VAAVLEEVRPYM-RSHGGDVELVKVEGETVYVRLQGACSGCYLSAVTLKNGVEEAIKARL 152
Query: 224 PAIAAV 229
P IA V
Sbjct: 153 PEIAYV 158
>gi|389751042|gb|EIM92115.1| HIRA-interacting protein 5 [Stereum hirsutum FP-91666 SS1]
Length = 299
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP ++ DGG++ D +V++KL+G+C C SS +T+K GIER LM
Sbjct: 191 IKELLDTRVRPAIMEDGGDIEYRGFTDDGLVQVKLKGSCRGCSSSTVTLKTGIERMLMHY 250
Query: 145 IPEIVAVESVADEETGLELNE 165
IPE+ VE + D+E + L+E
Sbjct: 251 IPEVKGVEQILDQEETIALDE 271
>gi|218886099|ref|YP_002435420.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|218757053|gb|ACL07952.1| nitrogen-fixing NifU domain protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 77
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +++ LD++RPYL DGG+V L EI + VVR++L GAC CP S T+K G+ER +++
Sbjct: 7 ERVQAALDKVRPYLQGDGGDVELVEITADGVVRVRLTGACKGCPMSQQTLKGGVERMVLK 66
Query: 144 KIPEIVAVESV 154
++ E+ VE+V
Sbjct: 67 EVAEVKRVEAV 77
>gi|406031793|ref|YP_006730685.1| nitrogen fixing NifU domain-containing protein [Mycobacterium
indicus pranii MTCC 9506]
gi|405130340|gb|AFS15595.1| Nitrogen fixing NifU domain protein [Mycobacterium indicus pranii
MTCC 9506]
Length = 307
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 83 TAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
T + LD +RPYL S GG+V L EIDG+ +RL G+C SCPSS +T+++ ++ +
Sbjct: 94 THRRVADALDRVRPYLGSHGGDVDLLEIDGDTLRLAFTGSCKSCPSSAVTLELAVQDAVR 153
Query: 143 EKIPEIVAVESV 154
PEI ++E V
Sbjct: 154 AAAPEISSIEVV 165
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 168 IEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITG-----PAAGVMTVRVAVTQKLREK 222
+ L+ +RPYL G+ GG ++L+ ID +++ TG P++ V T+ +AV +R
Sbjct: 98 VADALDRVRPYL-GSHGGDVDLLEIDGDTLRLAFTGSCKSCPSSAV-TLELAVQDAVRAA 155
Query: 223 IPAIAAVQLL 232
P I++++++
Sbjct: 156 APEISSIEVV 165
>gi|393247544|gb|EJD55051.1| HIRA-interacting protein 5 [Auricularia delicata TFB-10046 SS5]
Length = 223
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 11/122 (9%)
Query: 49 HSSCRLLLIR---KRGAARRNVIKAVATPDSAIELPLTAENIESVLD-EIRPYLISDGGN 104
H S + L R +R AA + + T + + I+ +LD +RP ++ DGG+
Sbjct: 87 HFSAQAPLFRSDQERAAAGPQDTRVLETDSDTVAM------IKELLDTRVRPAIMEDGGD 140
Query: 105 VALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLEL 163
+ + +VR+KL+G+C C SS +T+K GIER LM IPE+ VE V D+E + L
Sbjct: 141 IEYRGFGEDGIVRVKLKGSCRGCDSSTVTLKSGIERMLMHYIPEVQGVEQVLDQEEEIAL 200
Query: 164 NE 165
+E
Sbjct: 201 DE 202
>gi|373456668|ref|ZP_09548435.1| nitrogen-fixing NifU domain-containing protein [Caldithrix abyssi
DSM 13497]
gi|371718332|gb|EHO40103.1| nitrogen-fixing NifU domain-containing protein [Caldithrix abyssi
DSM 13497]
Length = 73
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEID-GNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E + VL+ IRP L +DGG+V +ID NVV ++L GACG CP S +T+K GIER +
Sbjct: 3 EKVLKVLESIRPGLQADGGDVEFVKIDEDNVVYIRLVGACGGCPMSQITLKQGIERIMKM 62
Query: 144 KIPEIVAVESV 154
+IPE+ AVE++
Sbjct: 63 QIPEVKAVEAI 73
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAGV----MTVRVAVTQKL 219
+E + KVLE IRP L A GG +E V IDE +V +R+ G G +T++ + + +
Sbjct: 2 KEKVLKVLESIRPGL-QADGGDVEFVKIDEDNVVYIRLVGACGGCPMSQITLKQGIERIM 60
Query: 220 REKIPAIAAVQ 230
+ +IP + AV+
Sbjct: 61 KMQIPEVKAVE 71
>gi|163781905|ref|ZP_02176905.1| nifU-like domain protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159883125|gb|EDP76629.1| nifU-like domain protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 87
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 83 TAENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIERR 140
T E +E VLDEIRP L DGG+V L +I DG V+ ++L GAC C SV+T+K GIER
Sbjct: 5 TREEVEKVLDEIRPALRFDGGDVELVDIQEDGTVL-VRLVGACSGCGMSVLTLKAGIERA 63
Query: 141 LMEKIPEIVAVESV 154
L +K PEI V+ V
Sbjct: 64 LKQKFPEIKEVKDV 77
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAG----VMTVRVAVTQKLR 220
E +EKVL+EIRP L GG +ELV I E V VR+ G +G V+T++ + + L+
Sbjct: 7 EEVEKVLDEIRPALR-FDGGDVELVDIQEDGTVLVRLVGACSGCGMSVLTLKAGIERALK 65
Query: 221 EKIPAIAAVQ 230
+K P I V+
Sbjct: 66 QKFPEIKEVK 75
>gi|427416493|ref|ZP_18906676.1| Modular FeS cluster scaffolding protein NifU [Leptolyngbya sp. PCC
7375]
gi|425759206|gb|EKV00059.1| Modular FeS cluster scaffolding protein NifU [Leptolyngbya sp. PCC
7375]
Length = 290
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VL E +RP LI+DGG+V L+++ G+VV+++L+GACGSC SS T+K IE RL ++
Sbjct: 222 IQQVLTEDVRPMLIADGGDVELYDVSGDVVQVQLKGACGSCDSSTATLKGAIETRLQSQV 281
Query: 146 -PEIVAV 151
PE+ V
Sbjct: 282 SPELTVV 288
>gi|383826456|ref|ZP_09981583.1| hypothetical protein MXEN_16382 [Mycobacterium xenopi RIVM700367]
gi|383332756|gb|EID11231.1| hypothetical protein MXEN_16382 [Mycobacterium xenopi RIVM700367]
Length = 300
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+ LD +RPYL S GG+V L +I G+ VRL+ G+C SCPSS +T+++ +E + P
Sbjct: 94 VADALDRVRPYLGSHGGDVHLLDIVGDTVRLRFSGSCKSCPSSALTLELAVEDAVRAAAP 153
Query: 147 EIVAVESVADE 157
EI ++E VA E
Sbjct: 154 EISSIEVVAAE 164
>gi|374813230|ref|ZP_09716967.1| iron-sulfur cluster-binding protein, Rieske family [Treponema
primitia ZAS-1]
Length = 74
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ LD +RP L +DGG+V + D +V LKL GACG+CP + MT+KMGIE L +
Sbjct: 4 EQVKIALDNVRPSLQNDGGDVEFVSLSDDGIVSLKLTGACGTCPMAQMTLKMGIENYLKK 63
Query: 144 KIPEIVAVESV 154
++PE+ AV V
Sbjct: 64 EVPEVKAVVGV 74
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 8/71 (11%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV-----MTVRVAVTQK 218
EE ++ L+ +RP L GG +E V++ D+ IV +++TG A G MT+++ +
Sbjct: 3 EEQVKIALDNVRPSLQND-GGDVEFVSLSDDGIVSLKLTG-ACGTCPMAQMTLKMGIENY 60
Query: 219 LREKIPAIAAV 229
L++++P + AV
Sbjct: 61 LKKEVPEVKAV 71
>gi|328949227|ref|YP_004366564.1| nitrogen-fixing NifU domain-containing protein [Treponema
succinifaciens DSM 2489]
gi|328449551|gb|AEB15267.1| nitrogen-fixing NifU domain-containing protein [Treponema
succinifaciens DSM 2489]
Length = 78
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
++ L+ RP L +DGG++ ID N V LKL GACGSCP + MT+KMGIER L E
Sbjct: 10 VKETLEAFRPQLNADGGDMEFINIDDENKVHLKLTGACGSCPMATMTLKMGIERYLKETC 69
Query: 146 PEIVAV 151
PEI V
Sbjct: 70 PEISEV 75
>gi|304408198|ref|ZP_07389847.1| nitrogen-fixing NifU domain protein [Paenibacillus curdlanolyticus
YK9]
gi|304342886|gb|EFM08731.1| nitrogen-fixing NifU domain protein [Paenibacillus curdlanolyticus
YK9]
Length = 81
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 45/58 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
+ + VLD++RP+L DGG+V L +++ +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 11 DEVLDVLDKLRPFLQRDGGDVELVDVEEGIVKLRLVGACGSCPSSTITLKAGIERALL 68
>gi|410954973|ref|XP_003984133.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 2 [Felis catus]
Length = 113
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 32 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSMITLKNGIQNMLQFYI 91
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 92 PEVEGVEQVMDDES 105
>gi|291386642|ref|XP_002709869.1| PREDICTED: HIRA interacting protein 5 [Oryctolagus cuniculus]
Length = 255
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 174 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 233
Query: 146 PEIVAVESVADEET 159
PE+ VE V ++E+
Sbjct: 234 PEVEGVEQVMEDES 247
>gi|225717260|gb|ACO14476.1| NFU1 iron-sulfur cluster scaffold homolog [Esox lucius]
Length = 253
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L +
Sbjct: 175 IKELLDTRIRPTVQEDGGDVLYRGFEDGIVKLKLQGSCTSCPSSIVTLKSGIQNMLQFYV 234
Query: 146 PEIVAVESVADEE 158
PE+ VE V D++
Sbjct: 235 PEVEGVEQVKDDQ 247
>gi|1171712|sp|Q00241.1|NIFU_PLEBO RecName: Full=Nitrogen fixation protein NifU
gi|441182|dbj|BAA00567.1| NifU protein [Leptolyngbya boryana IAM M-101]
gi|228686|prf||1808318C nifU gene
Length = 205
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L+++DG+ V++ L+GACGSC SS T+K +E +L ++
Sbjct: 137 IQKVLDEEVRPVLIADGGDVELYDVDGDFVKVTLKGACGSCASSTATLKDAVEAKLRLRV 196
Query: 146 PEIVAVESV 154
+ V++V
Sbjct: 197 LPTLVVQAV 205
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 34/156 (21%)
Query: 93 EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSC-------PSSVMTMKMGIERRLMEKI 145
+IR +I +G L ++ +K G CGSC ++V+ K R+ +I
Sbjct: 64 KIRRVVIENG----LTTVEQVTSYVKAGGGCGSCLADIEDIITAVIDEKETTAARIAAEI 119
Query: 146 PE------IVAVESVADEETGLELNEENIEKVL-EEIRPYLVGAAGGSLELVTIDEPIVK 198
E + V+ +A I+KVL EE+RP L+ A GG +EL +D VK
Sbjct: 120 SEAQIRKPLTNVQKIA-----------LIQKVLDEEVRPVLI-ADGGDVELYDVDGDFVK 167
Query: 199 VRITGP----AAGVMTVRVAVTQKLREKIPAIAAVQ 230
V + G A+ T++ AV KLR ++ VQ
Sbjct: 168 VTLKGACGSCASSTATLKDAVEAKLRLRVLPTLVVQ 203
>gi|257456257|ref|ZP_05621454.1| NifU-like domain protein [Treponema vincentii ATCC 35580]
gi|257446343|gb|EEV21389.1| NifU-like domain protein [Treponema vincentii ATCC 35580]
Length = 75
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERR 140
+T + ++ LD +RP+L +DGG+V + D VV ++L+GACGSCP ++MT+K GIE +
Sbjct: 2 VTVDEVKQALDVVRPHLQADGGDVEFVSLSDDGVVSVRLKGACGSCPVALMTLKSGIEAQ 61
Query: 141 LMEKIPEIVAVESV 154
L E P+I V S+
Sbjct: 62 LKESYPDIKKVVSI 75
>gi|126656503|ref|ZP_01727764.1| Fe-S cluster assembly protein NifU [Cyanothece sp. CCY0110]
gi|126622189|gb|EAZ92896.1| Fe-S cluster assembly protein NifU [Cyanothece sp. CCY0110]
Length = 293
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 80 LPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMK 134
LPLT I+ VL+E +RP L DGG+V L ++DG++V++ L+GAC SCPSS T+K
Sbjct: 214 LPLTNLQKITLIQQVLEEEVRPALAQDGGDVDLFDVDGDLVKVILKGACDSCPSSTATLK 273
Query: 135 MGIERRLMEKI-PEIVAV 151
M IE RL +++ P++ +
Sbjct: 274 MAIEARLRDRVSPDLTVI 291
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEI-VAVESVADEETGLELNEENIEKVL--- 172
+K G CGSC + + + I + EK + VA E V + L L N++K+
Sbjct: 172 VKAGGGCGSCLADIDDL---IAEIVQEKATAVAVATEVVKAKSESLPLT--NLQKITLIQ 226
Query: 173 ----EEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLREKI 223
EE+RP L GG ++L +D +VKV + G + T+++A+ +LR+++
Sbjct: 227 QVLEEEVRPAL-AQDGGDVDLFDVDGDLVKVILKGACDSCPSSTATLKMAIEARLRDRV 284
>gi|269928406|ref|YP_003320727.1| nitrogen-fixing NifU domain-containing protein [Sphaerobacter
thermophilus DSM 20745]
gi|269787763|gb|ACZ39905.1| nitrogen-fixing NifU domain protein [Sphaerobacter thermophilus DSM
20745]
Length = 290
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E + LD +RPYL S GG+V L EI V R++L+G C CP+S +T+++ IER + E
Sbjct: 90 ERVGQALDRVRPYLHSHGGDVDLLEIVDGVARVRLRGTCRGCPASAVTLRLAIERAVHEL 149
Query: 145 IPEIVAVESVADE 157
P++ +E+V D+
Sbjct: 150 APDLDGIEAVTDD 162
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAG----VMTVRVAVTQKLR 220
EE + + L+ +RPYL + GG ++L+ I + + +VR+ G G +T+R+A+ + +
Sbjct: 89 EERVGQALDRVRPYL-HSHGGDVDLLEIVDGVARVRLRGTCRGCPASAVTLRLAIERAVH 147
Query: 221 EKIPAIAAVQ 230
E P + ++
Sbjct: 148 ELAPDLDGIE 157
>gi|238231487|ref|NP_001154157.1| HIRA-interacting protein 5 [Oncorhynchus mykiss]
gi|225704456|gb|ACO08074.1| HIRA-interacting protein 5 [Oncorhynchus mykiss]
Length = 250
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L +
Sbjct: 172 IKELLDTRIRPTVQEDGGDVLYCGFEDGIVKLKLQGSCTSCPSSMVTLKSGIQNMLQFYV 231
Query: 146 PEIVAVESVADEE 158
PE+ VE V DE+
Sbjct: 232 PEVEGVEQVKDEQ 244
>gi|384494366|gb|EIE84857.1| hypothetical protein RO3G_09567 [Rhizopus delemar RA 99-880]
Length = 171
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 19/150 (12%)
Query: 30 TKSFFG------ERVSLTRWR--NPVCHSSCRLLLIRKRGAARRNVI---KAVATPDSAI 78
T FFG + ++ W+ P +S+ I A+ ++++ + +A D+ I
Sbjct: 16 TGVFFGPDFITISKDAMAEWQLMKPDIYSA-----IMDHFASGQSIVYDDQDLAASDTTI 70
Query: 79 --ELPLTAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
+ P + I+ +LD IRP + DGG++ + +V+LKL+G+C C S+ +T+K
Sbjct: 71 LPDDPEEVQMIKELLDTRIRPSIQEDGGDIEYCGFENGIVKLKLKGSCRGCDSATVTLKN 130
Query: 136 GIERRLMEKIPEIVAVESVADEETGLELNE 165
GIE LM IPE+ AVE V DE + + E
Sbjct: 131 GIENMLMHYIPEVQAVEQVIDENESVAIEE 160
>gi|126434715|ref|YP_001070406.1| NifU domain-containing protein [Mycobacterium sp. JLS]
gi|126234515|gb|ABN97915.1| nitrogen-fixing NifU domain protein [Mycobacterium sp. JLS]
Length = 294
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
I LD +RPYL S GG+V L +DG+ RL+ G+C SCPSS +T+++ +E + P
Sbjct: 99 ITDALDTVRPYLGSHGGDVHLLGVDGDTARLRFAGSCKSCPSSAVTLELAVEDAIRAAAP 158
Query: 147 EIVAVESVADE 157
EI +E VA++
Sbjct: 159 EIETIEVVAED 169
>gi|407772632|ref|ZP_11119934.1| HIRA-interacting protein 5 [Thalassospira profundimaris WP0211]
gi|407284585|gb|EKF10101.1| HIRA-interacting protein 5 [Thalassospira profundimaris WP0211]
Length = 189
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + VV L++ GAC CPSS T+KMGIE L
Sbjct: 117 QIKELLDTRVRPAVAQDGGDIVFHRFEDGVVFLEMHGACAGCPSSTATLKMGIENMLRYY 176
Query: 145 IPEIVAVESV 154
+PE+ AVE V
Sbjct: 177 VPEVQAVEPV 186
>gi|347731759|ref|ZP_08864846.1| nifU-like domain protein [Desulfovibrio sp. A2]
gi|347519434|gb|EGY26592.1| nifU-like domain protein [Desulfovibrio sp. A2]
Length = 77
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +++ LD++RPYL DGG+V L +I + VVR++L GAC CP S T+K G+ER +++
Sbjct: 7 EKVQAALDKVRPYLQGDGGDVELVDITADGVVRVRLTGACKGCPMSQQTLKGGVERMVLK 66
Query: 144 KIPEIVAVESV 154
++ E+ VE+V
Sbjct: 67 EVAEVKRVEAV 77
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTID-EPIVKVRITGPAAG 207
E ++ L+++RPYL G GG +ELV I + +V+VR+TG G
Sbjct: 7 EKVQAALDKVRPYLQG-DGGDVELVDITADGVVRVRLTGACKG 48
>gi|307153502|ref|YP_003888886.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7822]
gi|306983730|gb|ADN15611.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7822]
Length = 297
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
IE VL+ E+RP L++DGGNV L++++G +V++ L+GACGSC S T+K+ IE +L E I
Sbjct: 229 IERVLEQEVRPILMADGGNVELYDLEGEIVKVVLKGACGSCAGSTATLKIAIEAKLKELI 288
Query: 146 PEIVAVESV 154
+ V++V
Sbjct: 289 DPALVVQAV 297
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 168 IEKVLE-EIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREK 222
IE+VLE E+RP L+ A GG++EL ++ IVKV + G A T+++A+ KL+E
Sbjct: 229 IERVLEQEVRPILM-ADGGNVELYDLEGEIVKVVLKGACGSCAGSTATLKIAIEAKLKEL 287
Query: 223 IPAIAAVQ 230
I VQ
Sbjct: 288 IDPALVVQ 295
>gi|149913250|ref|ZP_01901784.1| NifU-like domain protein [Roseobacter sp. AzwK-3b]
gi|149813656|gb|EDM73482.1| NifU-like domain protein [Roseobacter sp. AzwK-3b]
Length = 187
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFHGFERGVVYLHMQGACAGCPSSTITLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE+ V V
Sbjct: 176 IPEVTEVRPVG 186
>gi|349805575|gb|AEQ18260.1| putative nfu1 iron-sulfur cluster protein [Hymenochirus curtipes]
Length = 79
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG+V +V+LKLQG+C +CPSS++T+K GI+ L IPE+ VE
Sbjct: 12 IRPTVQEDGGDVLFRGFQDGIVQLKLQGSCTTCPSSIITLKNGIQNMLQFYIPEVEGVEQ 71
Query: 154 VADEE 158
V DE+
Sbjct: 72 VTDED 76
>gi|443319390|ref|ZP_21048623.1| Fe-S cluster assembly protein NifU [Leptolyngbya sp. PCC 6406]
gi|442781077|gb|ELR91184.1| Fe-S cluster assembly protein NifU [Leptolyngbya sp. PCC 6406]
Length = 302
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V LH+++G+ V +KLQGAC SC SS T+K IE +L +
Sbjct: 234 IQKVLDEEVRPVLIADGGDVQLHDVEGDRVLVKLQGACDSCSSSTETLKYAIEDKLQNLV 293
Query: 146 PEIVAVESV 154
+ V+++
Sbjct: 294 LPTLTVQAI 302
>gi|159163237|pdb|1VEH|A Chain A, Solution Structure Of Rsgi Ruh-018, A Nifu-Like Domain Of
Hirip5 Protein From Mouse Cdna
Length = 92
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +VRLKLQG+C SCPSS++T+K GI+ L I
Sbjct: 18 IKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYI 77
Query: 146 PEIVAVESVADEETG 160
PE+ VE V+ +G
Sbjct: 78 PEVEGVEQVSGPSSG 92
>gi|441498180|ref|ZP_20980381.1| NifU domain protein [Fulvivirga imtechensis AK7]
gi|441438087|gb|ELR71430.1| NifU domain protein [Fulvivirga imtechensis AK7]
Length = 193
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 83 TAENIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
T + I+ +LDE IRP + DGG +A H VV++ LQG+C CPSS +T+K GIE L
Sbjct: 119 TVKKIKGILDEYIRPAVEQDGGAIAFHSYHEGVVKVLLQGSCSGCPSSTVTLKAGIENLL 178
Query: 142 MEKIPEIVAVES 153
+PE+ AVE+
Sbjct: 179 KRMLPEVQAVEA 190
>gi|317121652|ref|YP_004101655.1| nitrogen-fixing NifU domain-containing protein [Thermaerobacter
marianensis DSM 12885]
gi|315591632|gb|ADU50928.1| nitrogen-fixing NifU domain protein [Thermaerobacter marianensis
DSM 12885]
Length = 73
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E L+ IRP + DGG++ L ++D N VVR++L GAC CP S+MT+K GIER L E
Sbjct: 3 ELVEQALESIRPAIQMDGGDIELVDVDENGVVRVRLIGACVGCPMSIMTLKAGIERILRE 62
Query: 144 KIPEIVAVESV 154
++P + VE+V
Sbjct: 63 RVPGVTDVEAV 73
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDE-PIVKVRITGPAAG----VMTVRVAVTQKLR 220
E +E+ LE IRP + GG +ELV +DE +V+VR+ G G +MT++ + + LR
Sbjct: 3 ELVEQALESIRPA-IQMDGGDIELVDVDENGVVRVRLIGACVGCPMSIMTLKAGIERILR 61
Query: 221 EKIPAIAAVQ 230
E++P + V+
Sbjct: 62 ERVPGVTDVE 71
>gi|339498821|ref|YP_004696856.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta
caldaria DSM 7334]
gi|338833170|gb|AEJ18348.1| nitrogen-fixing NifU domain-containing protein [Spirochaeta
caldaria DSM 7334]
Length = 74
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E I++ L+++RP L +DGG+V + + VV LKL GACGSCP S MT++MGIE+ L +
Sbjct: 4 ERIKTALEDVRPSLQADGGDVEFVSVSEDGVVSLKLTGACGSCPMSQMTLRMGIEKYLKK 63
Query: 144 KIPEIVAV 151
+PE+ +V
Sbjct: 64 VVPEVSSV 71
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAGV----MTVRVAVTQKL 219
EE I+ LE++RP L A GG +E V++ E +V +++TG MT+R+ + + L
Sbjct: 3 EERIKTALEDVRPSL-QADGGDVEFVSVSEDGVVSLKLTGACGSCPMSQMTLRMGIEKYL 61
Query: 220 REKIPAIAAV 229
++ +P +++V
Sbjct: 62 KKVVPEVSSV 71
>gi|255940800|ref|XP_002561169.1| Pc16g08500 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585792|emb|CAP93520.1| Pc16g08500 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 320
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ L + +V LKL+GAC +C SS +T+K GIE LM I E+ VE
Sbjct: 223 IRPAIQEDGGDIELKGFENGIVMLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVKGVEQ 282
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V DEE + ++E K E++R
Sbjct: 283 VMDEEEIISMHE--FSKFEEKLR 303
>gi|149036648|gb|EDL91266.1| histone cell cycle regulation defective interacting protein 5
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 79
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 95 RPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 154
RP + DGG+V + +VRLKLQG+C SCPSS++T+K GI+ L IPE+ VE V
Sbjct: 6 RPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPEVEGVEQV 65
Query: 155 ADEE 158
D+E
Sbjct: 66 MDDE 69
>gi|340374369|ref|XP_003385710.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Amphimedon queenslandica]
Length = 264
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 13/136 (9%)
Query: 33 FFG-ERVSLTRWRNPVCHSSCR---LLLIRKRGAARRNVIKAVATPDSAIELPLTAENIE 88
FFG + +++T+ + + S+ + + A+ VIK ATP +LP + E
Sbjct: 111 FFGPDFITVTKADDDMPWSTIKPHVYATVMDFFASGLPVIKEEATPSG--DLPAEEDEDE 168
Query: 89 SVL-------DEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
+V+ IRP + DGG++ + +V+LK+QG+C +CPSS +T+K G+E +
Sbjct: 169 TVMMIKELLDTRIRPTVQEDGGDIVFVDFKDGIVKLKMQGSCSNCPSSTVTLKAGVENMI 228
Query: 142 MEKIPEIVAVESVADE 157
+PE+ VE V +E
Sbjct: 229 QFYVPEVKGVEQVEEE 244
>gi|409083312|gb|EKM83669.1| hypothetical protein AGABI1DRAFT_81428 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 94 IRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
+RP ++ DGG++ D + VV+LKL+G+C C SS +T+K GIER L IPE+ +V+
Sbjct: 128 VRPAIMEDGGDIEFRGFDEDGVVKLKLKGSCRGCSSSTVTLKSGIERMLTHYIPEVKSVQ 187
Query: 153 SVADEETGLELNE-ENIEKVLE 173
V D+E + L E + +E+ LE
Sbjct: 188 EVLDQEDEIALEEFQKLEQKLE 209
>gi|426201635|gb|EKV51558.1| hypothetical protein AGABI2DRAFT_133221 [Agaricus bisporus var.
bisporus H97]
Length = 221
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 94 IRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
+RP ++ DGG++ D + VV+LKL+G+C C SS +T+K GIER L IPE+ +V+
Sbjct: 128 VRPAIMEDGGDIEFRGFDEDGVVKLKLKGSCRGCSSSTVTLKSGIERMLTHYIPEVKSVQ 187
Query: 153 SVADEETGLELNE-ENIEKVLE 173
V D+E + L E + +E+ LE
Sbjct: 188 EVLDQEDEIALEEFQKLEQKLE 209
>gi|390603762|gb|EIN13153.1| HIRA-interacting protein 5 [Punctularia strigosozonata HHB-11173
SS5]
Length = 218
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 83 TAENIESVLD-EIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERR 140
T ++ +LD +RP ++ DGG++ + + +V++KL+G+C C SS +T+K GIER
Sbjct: 116 TVAMVKELLDTRVRPAIMEDGGDIEYRGMTEDGIVQVKLKGSCRGCDSSTVTLKSGIERM 175
Query: 141 LMEKIPEIVAVESVADEETGLELNE-ENIEKVL 172
LM IPE+ VE + D+E + LNE E +E+ L
Sbjct: 176 LMHYIPEVKGVEQILDQEETIALNEFEKLEQRL 208
>gi|194763845|ref|XP_001964043.1| GF20932 [Drosophila ananassae]
gi|263505256|sp|B3MRT7.1|NFU1_DROAN RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|190618968|gb|EDV34492.1| GF20932 [Drosophila ananassae]
Length = 286
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + +V+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 146 PEIVAVESVAD 156
PE+ +VE V D
Sbjct: 242 PEVESVEQVFD 252
>gi|85083846|ref|XP_957202.1| HIRA-interacting protein 5 [Neurospora crassa OR74A]
gi|18376131|emb|CAD21196.1| conserved hypothetical protein [Neurospora crassa]
gi|28918289|gb|EAA27966.1| HIRA-interacting protein 5 [Neurospora crassa OR74A]
Length = 326
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V+LKL+GAC +C SS +T+K GIE LM I E+ VE
Sbjct: 225 IRPAIQEDGGDIEFRGFEDGIVKLKLRGACRTCDSSTVTLKNGIEGMLMHYIEEVQGVEQ 284
Query: 154 VADEETGLELN-----EENIEKVLEEIRPYLVG 181
V D E + L EE + K E+ P VG
Sbjct: 285 VLDPEEDIALQEFQKFEEKLRKQKGEVPPTTVG 317
>gi|427792445|gb|JAA61674.1| Putative nifu-like domain-containing-containing protein, partial
[Rhipicephalus pulchellus]
Length = 257
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + VV+LKLQG+C CPSS +T+K GI+ L +PE+ +VE
Sbjct: 171 IRPTVQEDGGDIVYMGFEDGVVKLKLQGSCTGCPSSSVTLKAGIQNMLQFYVPEVKSVEQ 230
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V DE +++ + +K+ + IR
Sbjct: 231 VVDESE--KVSNQEFQKLEDTIR 251
>gi|288818297|ref|YP_003432645.1| NifU-like protein [Hydrogenobacter thermophilus TK-6]
gi|384129057|ref|YP_005511670.1| nitrogen-fixing NifU domain-containing protein [Hydrogenobacter
thermophilus TK-6]
gi|288787697|dbj|BAI69444.1| NifU-like protein [Hydrogenobacter thermophilus TK-6]
gi|308751894|gb|ADO45377.1| nitrogen-fixing NifU domain protein [Hydrogenobacter thermophilus
TK-6]
Length = 87
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 83 TAENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIERR 140
T E IE+VLDEIRP L DGG+V L ++ DG V+ +++ GAC C SV+T+K GIER
Sbjct: 5 TREEIEAVLDEIRPALRFDGGDVELVDVLEDGTVL-VRMMGACSGCGMSVLTLKAGIERA 63
Query: 141 LMEKIPEIVAVESV 154
L K PEI V+ +
Sbjct: 64 LKNKFPEIKEVKDI 77
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAG----VMTVRVAVTQKLR 220
E IE VL+EIRP L GG +ELV + ++ V VR+ G +G V+T++ + + L+
Sbjct: 7 EEIEAVLDEIRPAL-RFDGGDVELVDVLEDGTVLVRMMGACSGCGMSVLTLKAGIERALK 65
Query: 221 EKIPAIAAVQ 230
K P I V+
Sbjct: 66 NKFPEIKEVK 75
>gi|336364327|gb|EGN92687.1| hypothetical protein SERLA73DRAFT_190703 [Serpula lacrymans var.
lacrymans S7.3]
Length = 300
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 94 IRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
+RP ++ DGG++ + D V++KL+G+C C SS +T+K GIER LM IPE+ VE
Sbjct: 202 VRPAIMEDGGDIEYRGLSDEGFVKIKLKGSCRGCDSSTVTLKSGIERMLMHYIPEVQGVE 261
Query: 153 SVADEETGLELNE 165
V DEE + L+E
Sbjct: 262 QVLDEEEVVALDE 274
>gi|255264504|ref|ZP_05343846.1| NifU domain protein [Thalassiobium sp. R2A62]
gi|255106839|gb|EET49513.1| NifU domain protein [Thalassiobium sp. R2A62]
Length = 187
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ D VV L +QGAC CPSS +T+KMGIE L
Sbjct: 116 QIKELLDTRVRPAVAQDGGDITFLGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHY 175
Query: 145 IPEIVAVESVA 155
IPE++ V VA
Sbjct: 176 IPEVLEVRPVA 186
>gi|356576863|ref|XP_003556549.1| PREDICTED: nifU-like protein 4, mitochondrial-like [Glycine max]
Length = 267
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLD-EIRPYLISDGGNVAL 107
+SS + L + + AA + A+ DS T I+ +L+ IRP + DGG++
Sbjct: 151 YSSAQPLFLDSQAAAAMDT--AIHQDDSE-----TVAMIKELLETRIRPAVQDDGGDIEY 203
Query: 108 --HEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVAD-EETGLELN 164
++D +V+L++QGAC CPSS +T+K GIE LM +PE+ VE D E+ G L+
Sbjct: 204 RGFDLDTGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDAEDDGAALS 263
Query: 165 EE 166
E
Sbjct: 264 GE 265
>gi|209965893|ref|YP_002298808.1| NifU-like domain-containing protein [Rhodospirillum centenum SW]
gi|209959359|gb|ACI99995.1| NifU-like domain protein [Rhodospirillum centenum SW]
Length = 186
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L ++GAC CPSS T+K GIE L
Sbjct: 116 QIKELLDIRVRPAVAQDGGDITFHGFDKGVVYLHMKGACAGCPSSTATLKAGIENLLRHY 175
Query: 145 IPEIVAVESV 154
IPE+V V V
Sbjct: 176 IPEVVEVRQV 185
>gi|281208054|gb|EFA82232.1| NIF system FeS cluster assembly domain-containing protein
[Polysphondylium pallidum PN500]
Length = 307
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
+RP L+ DGGN+ +V +KLQG C SC SS T+K GIER LM I E+ + +
Sbjct: 221 VRPTLLDDGGNIQYLGFKDGIVLVKLQGTCSSCSSSQATLKGGIERMLMHWISEVRGIMA 280
Query: 154 VADEETGLELNEENIEKVLEEI 175
V D+E LN E +KV +E+
Sbjct: 281 VTDDELD-NLNLEFFKKVDQEL 301
>gi|392398863|ref|YP_006435464.1| thioredoxin-like protein [Flexibacter litoralis DSM 6794]
gi|390529941|gb|AFM05671.1| thioredoxin-like protein [Flexibacter litoralis DSM 6794]
Length = 87
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E+ L+ +RPYL +DGG+V + EI + +V++++ GACGSC S +T+K GIE+ ++
Sbjct: 5 EKVEAALETVRPYLKADGGDVKVIEITEDGIVKVEMIGACGSCSISPITLKTGIEQAILS 64
Query: 144 KIPEIVAVESV 154
+PEI +VE++
Sbjct: 65 HVPEIKSVEAI 75
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAGV----MTVRVAVTQKL 219
EE +E LE +RPYL A GG ++++ I E IVKV + G +T++ + Q +
Sbjct: 4 EEKVEAALETVRPYL-KADGGDVKVIEITEDGIVKVEMIGACGSCSISPITLKTGIEQAI 62
Query: 220 REKIPAIAAVQLL 232
+P I +V+ +
Sbjct: 63 LSHVPEIKSVEAI 75
>gi|237752984|ref|ZP_04583464.1| NifU family protein [Helicobacter winghamensis ATCC BAA-430]
gi|229375251|gb|EEO25342.1| NifU family protein [Helicobacter winghamensis ATCC BAA-430]
Length = 81
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+E+ +D++RP LI DGGNV L +I+ V ++L+GAC CPSS T+K GIER L + I
Sbjct: 13 VEASIDKVRPMLIKDGGNVTLIKIENGKVYVRLEGACKGCPSSTQTLKFGIERTLKDDIH 72
Query: 147 EIVAVESVA 155
+ + SV+
Sbjct: 73 PDIEIISVS 81
>gi|254410535|ref|ZP_05024314.1| Fe-S cluster assembly protein NifU [Coleofasciculus chthonoplastes
PCC 7420]
gi|196182741|gb|EDX77726.1| Fe-S cluster assembly protein NifU [Coleofasciculus chthonoplastes
PCC 7420]
Length = 315
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VL+ EIRP L DGG+V L++++G+ V++ L+G+C CPS ++T+KM IE+RL E++
Sbjct: 246 IQQVLETEIRPTLAYDGGDVELYDVEGDRVKVILKGSCDGCPSVMITLKMAIEKRLQERV 305
Query: 146 PEIVAVESV 154
+ VE+V
Sbjct: 306 SPNLMVEAV 314
>gi|418323982|ref|ZP_12935239.1| NifU-like protein [Staphylococcus pettenkoferi VCU012]
gi|365228911|gb|EHM70084.1| NifU-like protein [Staphylococcus pettenkoferi VCU012]
Length = 80
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 45/57 (78%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
+ + V++++RP+L+ DGG+ +L +++ +V+L+L GACG+CPSS +T+K GIER L
Sbjct: 10 DQVAEVIEKLRPFLLRDGGDCSLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERAL 66
>gi|336378291|gb|EGO19449.1| hypothetical protein SERLADRAFT_401751 [Serpula lacrymans var.
lacrymans S7.9]
Length = 250
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 94 IRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
+RP ++ DGG++ + D V++KL+G+C C SS +T+K GIER LM IPE+ VE
Sbjct: 159 VRPAIMEDGGDIEYRGLSDEGFVKIKLKGSCRGCDSSTVTLKSGIERMLMHYIPEVQGVE 218
Query: 153 SVADEETGLELNE 165
V DEE + L+E
Sbjct: 219 QVLDEEEVVALDE 231
>gi|343084687|ref|YP_004773982.1| Scaffold protein Nfu/NifU [Cyclobacterium marinum DSM 745]
gi|342353221|gb|AEL25751.1| Scaffold protein Nfu/NifU [Cyclobacterium marinum DSM 745]
Length = 193
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 81 PLTAEN-------IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMT 132
PL EN I+ +LDE IRP + DGG + H VV++ LQGAC CPSS +T
Sbjct: 110 PLFDENDSEVVKKIKGILDEYIRPAVEQDGGAIVFHSFQDGVVKVLLQGACSGCPSSTVT 169
Query: 133 MKMGIERRLMEKIPEIVAVES 153
+K GIE L +PE+ +VE+
Sbjct: 170 LKSGIENLLTRMLPEVKSVEA 190
>gi|144900396|emb|CAM77260.1| NifU domain protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 182
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ D +V + LQGAC CPSS T+K GIE L
Sbjct: 112 QIKELLDTRVRPAVAQDGGDIIFRSFDDGIVYVHLQGACSGCPSSTATLKHGIENMLKYY 171
Query: 145 IPEIVAVESV 154
+PE+VAV++V
Sbjct: 172 VPEVVAVQAV 181
>gi|118464609|ref|YP_881874.1| hypothetical protein MAV_2683 [Mycobacterium avium 104]
gi|118165896|gb|ABK66793.1| conserved hypothetical protein [Mycobacterium avium 104]
Length = 316
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+ LD +RPYL S GG+V L EI G+ VRL L G+C SCPSS +T+++ +E + P
Sbjct: 97 VADALDSVRPYLGSHGGDVHLLEIVGDTVRLALDGSCKSCPSSAVTLELTVEDAVRSAAP 156
Query: 147 EIVAVESVAD 156
EI ++E V++
Sbjct: 157 EISSIEVVSE 166
>gi|374300712|ref|YP_005052351.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
africanus str. Walvis Bay]
gi|332553648|gb|EGJ50692.1| nitrogen-fixing NifU domain-containing protein [Desulfovibrio
africanus str. Walvis Bay]
Length = 80
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E + + LD IRP L +DGG+V L E+ D VV+++L+GAC C S MT+K GIER +++
Sbjct: 10 ERVLAALDMIRPVLRADGGDVELVEVTDTGVVKVRLRGACQCCTMSRMTLKNGIERTILK 69
Query: 144 KIPEIVAVESV 154
+IP + +VESV
Sbjct: 70 EIPGLTSVESV 80
>gi|433647289|ref|YP_007292291.1| thioredoxin-like protein [Mycobacterium smegmatis JS623]
gi|433297066|gb|AGB22886.1| thioredoxin-like protein [Mycobacterium smegmatis JS623]
Length = 296
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+ LD +RPYL S GG+V+L + VVRL+ QG+C +CPSS +T+++ +E + P
Sbjct: 100 VSDALDSVRPYLGSHGGDVSLLGVADGVVRLQFQGSCKTCPSSSVTLELAVEDAVRAAAP 159
Query: 147 EIVAVESVADE 157
EI ++E VA E
Sbjct: 160 EITSIEVVAAE 170
>gi|148284929|ref|YP_001249019.1| hypothetical protein OTBS_1710 [Orientia tsutsugamushi str.
Boryong]
gi|189184851|ref|YP_001938636.1| thioredoxin-like protein [Orientia tsutsugamushi str. Ikeda]
gi|146740368|emb|CAM80805.1| conserved hypothetical protein [Orientia tsutsugamushi str.
Boryong]
gi|189181622|dbj|BAG41402.1| thioredoxin-like protein [Orientia tsutsugamushi str. Ikeda]
Length = 182
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 93 EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
++RP + DGG++ H +V+L+++GAC CPSS MT+K GIE L IPE+V+VE
Sbjct: 121 KVRPAVAMDGGDIEYHSFKDGIVKLQMRGACVGCPSSTMTLKQGIESLLKYYIPEVVSVE 180
Query: 153 SV 154
V
Sbjct: 181 QV 182
>gi|359409335|ref|ZP_09201803.1| thioredoxin-like protein [SAR116 cluster alpha proteobacterium
HIMB100]
gi|356676088|gb|EHI48441.1| thioredoxin-like protein [SAR116 cluster alpha proteobacterium
HIMB100]
Length = 183
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 83 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
T + I+ +LD +RP + DGG++ H + VV L+++GAC CPSS T+KMGIE L
Sbjct: 109 TVQQIKHLLDTRVRPAVAMDGGDITFHSFEDGVVTLQMRGACQGCPSSTATLKMGIENML 168
Query: 142 MEKIPEI 148
IPE+
Sbjct: 169 RHYIPEV 175
>gi|206890081|ref|YP_002249266.1| thioredoxin [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742019|gb|ACI21076.1| thioredoxin family protein [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 74
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+E VL +IR L++DGGN+ L +I N+V +KL+GACG+CP + +T+K +E+ L +IP
Sbjct: 7 VEQVLGKIRVGLMADGGNIDLVDIKDNIVYVKLKGACGTCPMATLTLKNWVEKTLKSEIP 66
Query: 147 EIVAVESV 154
E+ V +V
Sbjct: 67 EVKEVVAV 74
>gi|392934475|gb|AFM92572.1| Fe-S cluster assembly protein [Acaryochloris sp. HICR111A]
Length = 332
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 87 IESVL-DEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VL +E+RP LI+DGG+V L ++ G+VV++ L+GACG C SS T+K IE RL +++
Sbjct: 264 IQQVLTEEVRPLLIADGGDVELFDVSGDVVKVSLKGACGDCDSSTATLKGAIETRLQDRV 323
Query: 146 PEIVAVESV 154
+ V +V
Sbjct: 324 STTLTVVAV 332
>gi|372210382|ref|ZP_09498184.1| hypothetical protein FbacS_09702 [Flavobacteriaceae bacterium S85]
Length = 78
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%), Gaps = 7/79 (8%)
Query: 82 LTAEN----IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
+TAE+ +E L+EIRP+L++DGG+++L I+ NVV++KL+GAC C + MT+K G+
Sbjct: 1 MTAEDLQKKVEIALEEIRPFLVTDGGDISLVAIEENVVKVKLEGACVGCNVNQMTLKNGV 60
Query: 138 ERRLMEKIPEIVAVESVAD 156
E + + P+I ESV D
Sbjct: 61 EATIKKHAPQI---ESVID 76
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGV----MTVRVAVTQKLR 220
++ +E LEEIRP+LV GG + LV I+E +VKV++ G G MT++ V ++
Sbjct: 7 QKKVEIALEEIRPFLV-TDGGDISLVAIEENVVKVKLEGACVGCNVNQMTLKNGVEATIK 65
Query: 221 EKIPAIAAV 229
+ P I +V
Sbjct: 66 KHAPQIESV 74
>gi|410728255|ref|ZP_11366436.1| thioredoxin-like protein [Clostridium sp. Maddingley MBC34-26]
gi|410597194|gb|EKQ51827.1| thioredoxin-like protein [Clostridium sp. Maddingley MBC34-26]
Length = 73
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 91 LDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV 149
LD++RP L DGG+V L ++ D VV +K+QGACG+CP ++MT+KM IE+RL E++P +
Sbjct: 9 LDKVRPILQRDGGDVELVDVSDNGVVSVKMQGACGNCPGAMMTIKMIIEQRLKEEVPGVT 68
Query: 150 AVESV 154
V V
Sbjct: 69 EVIGV 73
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 8/71 (11%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITG-----PAAGVMTVRVAVTQK 218
+E I K L+++RP L GG +ELV + D +V V++ G P A +MT+++ + Q+
Sbjct: 2 KELIVKSLDKVRPIL-QRDGGDVELVDVSDNGVVSVKMQGACGNCPGA-MMTIKMIIEQR 59
Query: 219 LREKIPAIAAV 229
L+E++P + V
Sbjct: 60 LKEEVPGVTEV 70
>gi|416394082|ref|ZP_11686093.1| Cysteine desulfurase [Crocosphaera watsonii WH 0003]
gi|357263364|gb|EHJ12383.1| Cysteine desulfurase [Crocosphaera watsonii WH 0003]
Length = 469
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +L+E ++P+L DGG++ L++I+G++V++ L+GAC +CPSS T+K+ IE RL +++
Sbjct: 401 IQQILEEEVKPFLAQDGGDIDLYDIEGDLVKVVLKGACDACPSSTATLKLAIEARLKDRV 460
Query: 146 -PEIVAV 151
PE+ +
Sbjct: 461 DPELTVI 467
>gi|209484091|gb|ACI47520.1| iron-sulfer cluster scaffold protein NFU4 [Eucalyptus grandis]
Length = 243
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 94 IRPYLISDGGNVAL--HEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
IRP + DGG++ ++D +V+L++QGAC CPSS +T+K GIE LM +PE+ AV
Sbjct: 164 IRPAVQDDGGDIEYRGFDLDTGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKAV 223
Query: 152 ESVADEE 158
E D E
Sbjct: 224 EQDMDAE 230
>gi|220931159|ref|YP_002508067.1| nitrogen-fixing NifU domain-containing protein [Halothermothrix
orenii H 168]
gi|219992469|gb|ACL69072.1| nitrogen-fixing NifU domain protein [Halothermothrix orenii H 168]
Length = 74
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDG--NVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E + ++D+IRP L +DGG+V L ++D +V++KL GAC CP S MT+K GIER L
Sbjct: 3 EEVAKIIDKIRPSLQADGGDVKLVDVDDEKGIVKVKLLGACQGCPMSTMTIKNGIERVLK 62
Query: 143 EKIPEIVAVESV 154
EK+P + V+ V
Sbjct: 63 EKVPGVKEVKPV 74
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP--IVKVRITGPAAG----VMTVRVAVTQK 218
+E + K++++IRP L A GG ++LV +D+ IVKV++ G G MT++ + +
Sbjct: 2 KEEVAKIIDKIRPSL-QADGGDVKLVDVDDEKGIVKVKLLGACQGCPMSTMTIKNGIERV 60
Query: 219 LREKIPAIAAVQ 230
L+EK+P + V+
Sbjct: 61 LKEKVPGVKEVK 72
>gi|78189610|ref|YP_379948.1| NifU protein [Chlorobium chlorochromatii CaD3]
gi|78171809|gb|ABB28905.1| NifU protein, putative [Chlorobium chlorochromatii CaD3]
Length = 84
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ + + L+ +RPYL +DGG+ L I + VV +KL GACGSCP S +T++ G+E+ + +
Sbjct: 14 DRVIAALETVRPYLQADGGDCQLVGISKDMVVDVKLLGACGSCPMSTLTLRAGVEQAIKK 73
Query: 144 KIPEIVAVESV 154
IPEIV VESV
Sbjct: 74 AIPEIVRVESV 84
>gi|145228927|ref|XP_001388772.1| nifU-related protein [Aspergillus niger CBS 513.88]
gi|134054866|emb|CAK36880.1| unnamed protein product [Aspergillus niger]
gi|350637974|gb|EHA26330.1| hypothetical protein ASPNIDRAFT_206214 [Aspergillus niger ATCC
1015]
Length = 330
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + +V LKL+GAC +C SS +T++ GIE LM I
Sbjct: 221 IKELLDTRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTVTLRNGIESMLMHYI 280
Query: 146 PEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGS 186
E+ VE V D+E + ++E K E++R AA S
Sbjct: 281 EEVQGVEQVLDQEEEISMHE--FAKFEEKLRQQKGAAATAS 319
>gi|67922888|ref|ZP_00516385.1| Aminotransferase, class V:Nitrogen-fixing NifU, C-terminal
[Crocosphaera watsonii WH 8501]
gi|67855238|gb|EAM50500.1| Aminotransferase, class V:Nitrogen-fixing NifU, C-terminal
[Crocosphaera watsonii WH 8501]
Length = 469
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +L+E ++P+L DGG++ L++I+G++V++ L+GAC +CPSS T+K+ IE RL +++
Sbjct: 401 IQQILEEEVKPFLAQDGGDIDLYDIEGDLVKVVLKGACDACPSSTATLKLAIEARLKDRV 460
Query: 146 -PEIVAV 151
PE+ +
Sbjct: 461 DPELTVI 467
>gi|88802135|ref|ZP_01117663.1| NifU protein [Polaribacter irgensii 23-P]
gi|88782793|gb|EAR13970.1| NifU protein [Polaribacter irgensii 23-P]
Length = 301
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 85/167 (50%), Gaps = 31/167 (18%)
Query: 14 HQTLDSPSCSRPASKSTKSF-FGERV-------SLTRWR----NPVCHSSCRLLLIRKRG 61
+ +D S S P +++ +F F ++V S+T++ N V + R IR+
Sbjct: 135 FKNIDEASASSPLAQAIFNFPFVQQVFISDNYISVTKYDMVEWNEV-YGEVRTF-IREYL 192
Query: 62 AARRNVIK------AVATPDSAIELPLTAENIES----VLDE-IRPYLISDGGNVALHEI 110
A + +IK V T + A E + E I + +LDE I+P + SDGGN+A
Sbjct: 193 ADGKTIIKELPKEEVVETANKAQEPEVVLEGISAQIVDILDEYIKPAVASDGGNIAFRSY 252
Query: 111 D--GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP----EIVAV 151
D VVR+ LQGAC CPSS T+K GIE L E +P E+VA+
Sbjct: 253 DEQTKVVRVILQGACSGCPSSTATLKNGIENLLKEMLPDQINEVVAI 299
>gi|193215039|ref|YP_001996238.1| nitrogen-fixing NifU domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193088516|gb|ACF13791.1| nitrogen-fixing NifU domain protein [Chloroherpeton thalassium ATCC
35110]
Length = 95
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 81 PLTAENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIER 139
P+ A E+ L+ IRPYL +DGG+ L I D VV L+L GACGSCP S MT++ G+E+
Sbjct: 21 PIYARVTEA-LNSIRPYLQADGGDCELVGITDEQVVDLRLVGACGSCPMSAMTLRAGVEQ 79
Query: 140 RLMEKIPEIVAVES 153
+ +PEIV VE+
Sbjct: 80 AIKRAVPEIVRVEA 93
>gi|358372104|dbj|GAA88709.1| NifU-related protein [Aspergillus kawachii IFO 4308]
Length = 330
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + +V LKL+GAC +C SS +T++ GIE LM I
Sbjct: 221 IKELLDTRIRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTVTLRNGIESMLMHYI 280
Query: 146 PEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGS 186
E+ VE V D+E + ++E K E++R AA S
Sbjct: 281 EEVQGVEQVLDQEEEISMHE--FAKFEEKLRQQKGAAATAS 319
>gi|392940277|ref|ZP_10305921.1| thioredoxin-like protein [Thermoanaerobacter siderophilus SR4]
gi|392292027|gb|EIW00471.1| thioredoxin-like protein [Thermoanaerobacter siderophilus SR4]
Length = 73
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E VL+ +RP L +DGGNV L ++ + +V+++L GACG CP + +T+K GIER + E
Sbjct: 3 ERVEKVLELLRPSLQADGGNVELIDVTEDGIVKVRLTGACGGCPFATLTLKEGIERAIKE 62
Query: 144 KIPEIVAVESV 154
+IPE+ V +V
Sbjct: 63 EIPEVREVIAV 73
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAG----VMTVRVAVTQKLR 220
E +EKVLE +RP L A GG++EL+ + E IVKVR+TG G +T++ + + ++
Sbjct: 3 ERVEKVLELLRPSL-QADGGNVELIDVTEDGIVKVRLTGACGGCPFATLTLKEGIERAIK 61
Query: 221 EKIPAIAAV 229
E+IP + V
Sbjct: 62 EEIPEVREV 70
>gi|333977971|ref|YP_004515916.1| nitrogen-fixing NifU domain-containing protein [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333821452|gb|AEG14115.1| nitrogen-fixing NifU domain-containing protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 73
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E VL++IRP L DGG+V L ++ + VV+++L+GACG P S T+KMGIER L +
Sbjct: 3 EKVEEVLNKIRPALQRDGGDVELVDVGADGVVKVRLKGACGGUPMSTYTLKMGIERSLKQ 62
Query: 144 KIPEI 148
IPE+
Sbjct: 63 AIPEV 67
>gi|425737961|ref|ZP_18856230.1| hypothetical protein C273_06203 [Staphylococcus massiliensis S46]
gi|425480866|gb|EKU48029.1| hypothetical protein C273_06203 [Staphylococcus massiliensis S46]
Length = 80
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 45/57 (78%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
+ + V++++RP+L+ DGG+ +L +++ +V+L+L GACG+CPSS +T+K GIER L
Sbjct: 10 DQVAVVIEKLRPFLLRDGGDCSLVDVEDGIVKLQLHGACGTCPSSTITLKAGIERAL 66
>gi|346471251|gb|AEO35470.1| hypothetical protein [Amblyomma maculatum]
Length = 259
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + VV+LKLQG+C CPSS +T+K GI+ L +PE+ +VE
Sbjct: 173 IRPTVQEDGGDILYMGFEDGVVKLKLQGSCTGCPSSSVTLKAGIQNMLQFYVPEVKSVEQ 232
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V DE +++ + +K+ + IR
Sbjct: 233 VVDETE--KVSNDQFKKLEDTIR 253
>gi|392597012|gb|EIW86334.1| HIRA-interacting protein 5 [Coniophora puteana RWD-64-598 SS2]
Length = 222
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 94 IRPYLISDGGNV---ALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVA 150
+RP ++ DGG++ E DG +V++KL+G+C C SS +T+K GIER LM +PE+
Sbjct: 133 VRPSIMEDGGDIEYRGFTEEDG-IVKVKLKGSCRGCDSSAVTLKSGIERMLMHYVPEVKG 191
Query: 151 VESVADEETGLELNE 165
VE + DEE + L+E
Sbjct: 192 VEQILDEEEVIALDE 206
>gi|326390563|ref|ZP_08212119.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
JW 200]
gi|345018001|ref|YP_004820354.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
wiegelii Rt8.B1]
gi|325993388|gb|EGD51824.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
JW 200]
gi|344033344|gb|AEM79070.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 73
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E VL+ +RP L +DGGNV L ++ + +V+++L GACG CP + +T+K GIER + E
Sbjct: 3 ERVEEVLELLRPSLQADGGNVELIDVTEDGIVKVRLTGACGGCPFATLTLKEGIERAIKE 62
Query: 144 KIPEI 148
+IPE+
Sbjct: 63 EIPEV 67
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAG----VMTVRVAVTQKLR 220
E +E+VLE +RP L A GG++EL+ + E IVKVR+TG G +T++ + + ++
Sbjct: 3 ERVEEVLELLRPSL-QADGGNVELIDVTEDGIVKVRLTGACGGCPFATLTLKEGIERAIK 61
Query: 221 EKIPAIAAV 229
E+IP + V
Sbjct: 62 EEIPEVREV 70
>gi|114799747|ref|YP_759252.1| NifU domain-containing protein [Hyphomonas neptunium ATCC 15444]
gi|114739921|gb|ABI78046.1| NifU domain protein [Hyphomonas neptunium ATCC 15444]
Length = 192
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 94 IRPYLISDGGNVALHEIDGN--VVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
+RP + DGG++ H D + +V L ++GAC CPSS MT+K GIE L +PE+ AV
Sbjct: 129 VRPAVAQDGGDITFHRFDADTGIVHLSMRGACAGCPSSTMTLKQGIENMLRTYVPEVTAV 188
Query: 152 ES 153
E+
Sbjct: 189 EA 190
>gi|61806099|ref|YP_214459.1| NifU-like protein [Prochlorococcus phage P-SSM2]
gi|61374608|gb|AAX44605.1| NifU-like protein [Prochlorococcus phage P-SSM2]
gi|265525310|gb|ACY76107.1| NifU domain-containing protein [Prochlorococcus phage P-SSM2]
Length = 96
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 77 AIELPLTAENIESVLDEIRPYLISDGGNVALHEID--GNVVRLKLQGACGSCPSSVMTMK 134
A + LT EN+ VL+E+ PY+ +DGG + EI+ V+++L GAC +C S MT+K
Sbjct: 16 ATHMELTEENVVRVLEELAPYVEADGGFLQFVEIEEETGYVKVRLGGACETCAMSAMTLK 75
Query: 135 MGIERRLMEKIPEIVAVESV 154
GIE+++M +IP+ V V V
Sbjct: 76 QGIEKKVMSEIPDCVGVVQV 95
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 8/81 (9%)
Query: 159 TGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEP--IVKVRITGP----AAGVMTVR 212
T +EL EEN+ +VLEE+ PY V A GG L+ V I+E VKVR+ G A MT++
Sbjct: 17 THMELTEENVVRVLEELAPY-VEADGGFLQFVEIEEETGYVKVRLGGACETCAMSAMTLK 75
Query: 213 VAVTQKLREKIP-AIAAVQLL 232
+ +K+ +IP + VQ+L
Sbjct: 76 QGIEKKVMSEIPDCVGVVQVL 96
>gi|350399846|ref|XP_003485658.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Bombus impatiens]
Length = 275
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + +V+LK+QG+C SCPSSV+T+K G++ + I
Sbjct: 180 IKELLDTRIRPTVQEDGGDIVFMGFEEGIVKLKMQGSCTSCPSSVITLKNGVQNMMQFYI 239
Query: 146 PEIVAVESVADE 157
PE++ V V DE
Sbjct: 240 PEVLGVVQVEDE 251
>gi|224110188|ref|XP_002315442.1| predicted protein [Populus trichocarpa]
gi|222864482|gb|EEF01613.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLD-EIRPYLISDGGNVAL 107
+SS L + + AA ++ A++ DS T I+ +L+ IRP + DGG++
Sbjct: 163 YSSGEPLFLDSQTAAAKDT--AISEDDSE-----TVAMIKELLETRIRPAVQDDGGDIEY 215
Query: 108 HEID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEE 158
D +V+LK+QGAC CPSS +T+K GIE LM +PE+ VE D E
Sbjct: 216 QGFDEETGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDAE 268
>gi|238604262|ref|XP_002396156.1| hypothetical protein MPER_03666 [Moniliophthora perniciosa FA553]
gi|215468178|gb|EEB97086.1| hypothetical protein MPER_03666 [Moniliophthora perniciosa FA553]
Length = 115
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 94 IRPYLISDGGNVALHEIDGN---VVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVA 150
+RP + DGG++ D + +V++KL+G+C C SS +T+K GIER LM IPE+
Sbjct: 26 VRPAIQEDGGDIEYRGFDEDGSGLVKIKLKGSCRGCDSSTVTLKSGIERMLMHYIPEVKG 85
Query: 151 VESVADEETGLELNEEN-IEKVLEE 174
VE V D+E + L+E N +EK L +
Sbjct: 86 VEQVLDQEEEIALDEFNKLEKKLNQ 110
>gi|380016958|ref|XP_003692434.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Apis florea]
Length = 275
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + +V+LK+QG+C SCPSSV+T+K G++ + I
Sbjct: 180 IKELLDTRIRPTVQEDGGDIVFMGFEEGIVKLKMQGSCTSCPSSVITLKNGVQNMMQFYI 239
Query: 146 PEIVAVESVADE 157
PE++ V V DE
Sbjct: 240 PEVLGVVQVEDE 251
>gi|340712507|ref|XP_003394800.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Bombus terrestris]
Length = 275
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + +V+LK+QG+C SCPSSV+T+K G++ + I
Sbjct: 180 IKELLDTRIRPTVQEDGGDIVFMGFEEGIVKLKMQGSCTSCPSSVITLKNGVQNMMQFYI 239
Query: 146 PEIVAVESVADE 157
PE++ V V DE
Sbjct: 240 PEVLGVVQVEDE 251
>gi|218439087|ref|YP_002377416.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7424]
gi|218171815|gb|ACK70548.1| Fe-S cluster assembly protein NifU [Cyanothece sp. PCC 7424]
Length = 293
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
IE VL+ E+RP L +DGGNV L++++G+ +++ L+GACGSC S T+K IE +L E I
Sbjct: 225 IEQVLEKEVRPILKADGGNVELYDVEGHRIKVVLKGACGSCAGSTATLKHAIEDKLRELI 284
Query: 146 PEIVAVESV 154
+ VE+V
Sbjct: 285 DSTLVVEAV 293
>gi|297266190|ref|XP_001096379.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Macaca mulatta]
Length = 196
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 80 LPLTAENIES-VLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 138
LPL E S + P + DGG+V + +V+LKLQG+C SCPSS++T+K GI+
Sbjct: 108 LPLVTEETPSGEAGNMLPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQ 167
Query: 139 RRLMEKIPEIVAVESVADEET 159
L IPE+ VE V D+E+
Sbjct: 168 NMLQFYIPEVEGVEQVMDDES 188
>gi|150025719|ref|YP_001296545.1| NifU-like protein [Flavobacterium psychrophilum JIP02/86]
gi|149772260|emb|CAL43736.1| NifU-like protein [Flavobacterium psychrophilum JIP02/86]
Length = 79
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
N+E L+EIRP+L SDGG++ L I D V+++LQGAC SC S MTM+ G+E + +
Sbjct: 9 NVEKALEEIRPFLNSDGGDIELVSIEDSKHVKVRLQGACNSCSVSQMTMRAGVETTIKKY 68
Query: 145 IPEIVAVESVA 155
P+I V ++A
Sbjct: 69 APQIETVVNIA 79
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 167 NIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGP----AAGVMTVRVAVTQKLRE 221
N+EK LEEIRP+L + GG +ELV+I D VKVR+ G + MT+R V +++
Sbjct: 9 NVEKALEEIRPFL-NSDGGDIELVSIEDSKHVKVRLQGACNSCSVSQMTMRAGVETTIKK 67
Query: 222 KIPAIAAV 229
P I V
Sbjct: 68 YAPQIETV 75
>gi|406706902|ref|YP_006757255.1| NifU family protein,scaffold protein, Nfu/NifU family [alpha
proteobacterium HIMB5]
gi|406652678|gb|AFS48078.1| NifU family protein,scaffold protein, Nfu/NifU family [alpha
proteobacterium HIMB5]
Length = 179
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+NI +LD+ IRP + DGG++ E +VR++LQG+C CPSS MT+K G++ L
Sbjct: 109 KNIIKILDQKIRPAVAKDGGDIKFKEFKDGIVRVQLQGSCSGCPSSTMTLKQGVQNLLKH 168
Query: 144 KIPEIVAVESV 154
I E+ VE+V
Sbjct: 169 YIKEVKEVEAV 179
>gi|242086973|ref|XP_002439319.1| hypothetical protein SORBIDRAFT_09g004310 [Sorghum bicolor]
gi|241944604|gb|EES17749.1| hypothetical protein SORBIDRAFT_09g004310 [Sorghum bicolor]
Length = 268
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALH 108
+SS + L + AA + A+ DS I + + E +E+ IRP + DGG++
Sbjct: 156 YSSGQPLFLDSNAAASMDT--AIHEDDSEI-VAMIKELLET---RIRPAVQDDGGDIEYR 209
Query: 109 EID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLEL 163
D +V+LK+QGAC CPSS +T+K GIE LM +PE+ VE D + EL
Sbjct: 210 GFDPENGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFDGDEEAEL 266
>gi|336468407|gb|EGO56570.1| hypothetical protein NEUTE1DRAFT_32406, partial [Neurospora
tetrasperma FGSC 2508]
gi|350289337|gb|EGZ70562.1| HIRA-interacting protein 5, partial [Neurospora tetrasperma FGSC
2509]
Length = 279
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V+LKL+GAC +C SS +T+K GIE LM I E+ VE
Sbjct: 178 IRPAIQEDGGDIEFRGFEDGIVKLKLRGACRTCDSSTVTLKNGIEGMLMHYIEEVQGVEQ 237
Query: 154 VADEETGLELN-----EENIEKVLEEIRPYLVG 181
V D E + L EE + K E+ P VG
Sbjct: 238 VLDPEEDIALQEFQKFEEKLLKQKGEVPPTTVG 270
>gi|442749587|gb|JAA66953.1| Putative nifu-like domain-containing-containing protein [Ixodes
ricinus]
Length = 260
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + VV+LKLQG+C CPSS +T+K GI+ L +PE+ VE
Sbjct: 174 IRPTVQEDGGDIVYMGFEDGVVKLKLQGSCTGCPSSSVTLKAGIQNMLQFYVPEVKDVEQ 233
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V DE + E EK+ + IR
Sbjct: 234 VLDEADKVATKE--FEKLEDTIR 254
>gi|71021777|ref|XP_761119.1| hypothetical protein UM04972.1 [Ustilago maydis 521]
gi|46100569|gb|EAK85802.1| hypothetical protein UM04972.1 [Ustilago maydis 521]
Length = 293
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 87 IESVLD-EIRPYLISDGGNVAL----HEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
I+ +LD +RP + DGG++ + DG +V++KL+G+C C SS +T+K GIER L
Sbjct: 189 IKELLDTRVRPAIQEDGGDLEYRGFGEDTDG-IVKVKLKGSCRGCDSSTVTLKSGIERML 247
Query: 142 MEKIPEIVAVESVADEETGLELNE-ENIEKVLEEIR 176
M IPE+ VE V D E + L+E +E+ LE+ R
Sbjct: 248 MHYIPEVKGVEQVLDPEEEIALDEFAKLEQKLEKDR 283
>gi|392572099|gb|EIW65271.1| HIRA-interacting protein 5 [Trametes versicolor FP-101664 SS1]
Length = 220
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 94 IRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
+RP ++ DGG++ + D +V+LKL+G+C C SS +T+K GIER L+ IPE+ VE
Sbjct: 128 VRPAIMEDGGDIEYRDFTDDGIVQLKLKGSCRGCSSSTVTLKSGIERMLVHYIPEVKGVE 187
Query: 153 SVADEETGLELNE 165
V +E + LNE
Sbjct: 188 EVLGQEEEIALNE 200
>gi|66543732|ref|XP_395826.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Apis mellifera]
Length = 275
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + +V+LK+QG+C SCPSSV+T+K G++ + I
Sbjct: 180 IKELLDTRIRPTVQEDGGDIVFMGFEEGIVKLKMQGSCTSCPSSVITLKNGVQNMMQFYI 239
Query: 146 PEIVAVESVADE 157
PE++ V V DE
Sbjct: 240 PEVLGVVQVEDE 251
>gi|291225596|ref|XP_002732785.1| PREDICTED: GM13534-like [Saccoglossus kowalevskii]
Length = 275
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 83 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
T I+ +LD IRP + DGG++ + +V+LK+QG+C SCPSSV+T+K G++ L
Sbjct: 176 TVAMIKELLDTRIRPTVQEDGGDIVYMGFEKGIVKLKMQGSCTSCPSSVVTLKSGVQNML 235
Query: 142 MEKIPEIVAVESV 154
+PE+++VE V
Sbjct: 236 QFYVPEVLSVEQV 248
>gi|241156886|ref|XP_002407882.1| conserved hypothetical protein [Ixodes scapularis]
gi|215494245|gb|EEC03886.1| conserved hypothetical protein [Ixodes scapularis]
Length = 260
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + VV+LKLQG+C CPSS +T+K GI+ L +PE+ VE
Sbjct: 174 IRPTVQEDGGDIVYMGFEDGVVKLKLQGSCTGCPSSSVTLKAGIQNMLQFYVPEVKDVEQ 233
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V DE + E EK+ + IR
Sbjct: 234 VLDEADKVATKE--FEKLEDAIR 254
>gi|168061090|ref|XP_001782524.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666009|gb|EDQ52676.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 94 IRPYLISDGGNVALHEID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
IRP + DGG++ D +V LK+QGAC CPSS +T+K GIE LM + E+ V
Sbjct: 137 IRPAVQDDGGDIEYRGFDPESGIVSLKMQGACSGCPSSAVTLKSGIENMLMHYVSEVKGV 196
Query: 152 ESVADEETGLELN 164
+ V DE++ E N
Sbjct: 197 QEVHDEDSDEETN 209
>gi|20808161|ref|NP_623332.1| thioredoxin [Thermoanaerobacter tengcongensis MB4]
gi|20516751|gb|AAM24936.1| Thioredoxin-like proteins and domains [Thermoanaerobacter
tengcongensis MB4]
Length = 73
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E +L+ I+P L +DGG+V L ++ + VV++KL GACG CP + +T+K GIER + E
Sbjct: 3 ERVEEILNLIKPSLQADGGDVELVDVTEDGVVKVKLTGACGGCPFATLTLKEGIERAIKE 62
Query: 144 KIPEIVAVESV 154
+IPE+ V +V
Sbjct: 63 EIPEVKEVIAV 73
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAG----VMTVRVAVTQKLR 220
E +E++L I+P L A GG +ELV + E +VKV++TG G +T++ + + ++
Sbjct: 3 ERVEEILNLIKPSL-QADGGDVELVDVTEDGVVKVKLTGACGGCPFATLTLKEGIERAIK 61
Query: 221 EKIPAIAAV 229
E+IP + V
Sbjct: 62 EEIPEVKEV 70
>gi|311745600|ref|ZP_07719385.1| NifU domain protein [Algoriphagus sp. PR1]
gi|126578163|gb|EAZ82383.1| NifU domain protein [Algoriphagus sp. PR1]
Length = 193
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 57 IRKRGAARRNVIKAVATPDSAIELPLTAEN-------IESVLDE-IRPYLISDGGNVALH 108
I+K + + V+KA D PL EN I+ +LDE IRP + DGG + H
Sbjct: 91 IKKYLESGQAVVKADFDKD-----PLFDENDSETVKKIKGILDEYIRPAVEQDGGAIVFH 145
Query: 109 EIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
VV++ LQG+C CPSS +T+K GI+ L +PE+ VE+
Sbjct: 146 SFHDGVVKVLLQGSCSGCPSSTVTLKAGIQNLLTRMLPEVKEVEA 190
>gi|354594589|ref|ZP_09012628.1| hypothetical protein CIN_13240 [Commensalibacter intestini A911]
gi|353672265|gb|EHD13965.1| hypothetical protein CIN_13240 [Commensalibacter intestini A911]
Length = 189
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 64 RRNVIKAVATPDSAIELPLTAEN------IESVLD-EIRPYLISDGGNVALHEIDGNVVR 116
+ +IK E+ + AE+ I+ +LD EIRP + DGG++ H V
Sbjct: 90 HKAMIKMDCASSDFSEMDIAAEDQEIVNKIKDILDDEIRPAVARDGGDIIFHGYKAGSVY 149
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 154
L++QGAC CPSS +T+K G+E L +P++V+VE V
Sbjct: 150 LRMQGACQGCPSSSLTLKHGVETILRRHLPDLVSVEKV 187
>gi|163787250|ref|ZP_02181697.1| NifU-like protein [Flavobacteriales bacterium ALC-1]
gi|159877138|gb|EDP71195.1| NifU-like protein [Flavobacteriales bacterium ALC-1]
Length = 79
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
N+E LDEIRP+L SDGG++AL I D V+++L+GAC SC + MT+K G+E + +
Sbjct: 9 NVEKALDEIRPFLQSDGGDIALLSIEDDKFVKVQLEGACTSCSVNQMTLKSGVEMTIKKY 68
Query: 145 IPEIVAVESV 154
P+I V +V
Sbjct: 69 APQIEKVINV 78
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 167 NIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVTQKLRE 221
N+EK L+EIRP+L + GG + L++I D+ VKV++ G MT++ V +++
Sbjct: 9 NVEKALDEIRPFL-QSDGGDIALLSIEDDKFVKVQLEGACTSCSVNQMTLKSGVEMTIKK 67
Query: 222 KIPAIAAV 229
P I V
Sbjct: 68 YAPQIEKV 75
>gi|347549707|ref|YP_004856035.1| putative NifU protein [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346982778|emb|CBW86802.1| Putative NifU protein [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 78
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIER 139
++ ++ L + RP+L+ DGG+ L E+ DG V ++KL GAC +CPSSVMT+KMGIE
Sbjct: 4 ISYAEVDKALKKFRPFLVRDGGDYELVEVTPDGTV-KIKLLGACETCPSSVMTLKMGIEL 62
Query: 140 RLMEKI 145
L EKI
Sbjct: 63 TLAEKI 68
>gi|225680672|gb|EEH18956.1| HIRA-interacting protein [Paracoccidioides brasiliensis Pb03]
Length = 317
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V LKL+GAC +C SS +T+K GIE LM I E+ V
Sbjct: 220 IRPAIQEDGGDIEFRGFEDGIVNLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVKGVNQ 279
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V D+E + L+E N K E++R
Sbjct: 280 VLDQEEEIALSEFN--KFEEKLR 300
>gi|384248726|gb|EIE22209.1| HIRA-interacting protein 5 [Coccomyxa subellipsoidea C-169]
Length = 213
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV-AVE 152
IRP + DGG++ E G VV LK+QGAC CPSS +T+K GIE LM IPE+ VE
Sbjct: 132 IRPAVQEDGGDIGFDEETGQVV-LKMQGACSGCPSSSLTLKSGIENMLMHYIPEVKEVVE 190
Query: 153 SVADEETGLELNEEN 167
+ ADE L E N
Sbjct: 191 APADEAELAGLEEFN 205
>gi|170084143|ref|XP_001873295.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650847|gb|EDR15087.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 212
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 94 IRPYLISDGGNVALHEID---GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVA 150
+RP ++ DGG++ D +V++KL+G+C C SS +T+K GIER LM +PE+
Sbjct: 128 VRPAIMEDGGDIEFRGFDEEGDRLVKVKLKGSCRGCDSSTVTLKSGIERMLMHYVPEVKG 187
Query: 151 VESVADEETGLELNE 165
VE V D+E + L+E
Sbjct: 188 VEQVLDQEEEIALDE 202
>gi|226292348|gb|EEH47768.1| HIRA interacting protein [Paracoccidioides brasiliensis Pb18]
Length = 317
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V LKL+GAC +C SS +T+K GIE LM I E+ V
Sbjct: 220 IRPAIQEDGGDIEFRGFEDGIVNLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVKGVNQ 279
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V D+E + L+E N K E++R
Sbjct: 280 VLDQEEEIALSEFN--KFEEKLR 300
>gi|210075172|ref|XP_500339.2| YALI0B00264p [Yarrowia lipolytica]
gi|199425114|emb|CAG82553.2| YALI0B00264p [Yarrowia lipolytica CLIB122]
Length = 263
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 94 IRPYLISDGGNVALHEIDGN--VVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
IRP + DGG++A D + VV LKL GAC SC SS +T+K GIE LM + E+ V
Sbjct: 170 IRPAIQEDGGDIAFRGFDEDTGVVHLKLLGACRSCDSSAVTLKNGIESMLMHYVEEVTGV 229
Query: 152 ESVADEETGLELNE-ENIEKVL-----EEIRPYL 179
E D E + L E E +EK L EE+ P L
Sbjct: 230 EQFLDPEEKVSLEEFEKLEKRLAEEKGEEVPPSL 263
>gi|254295433|ref|YP_003061456.1| Scaffold protein Nfu/NifU [Hirschia baltica ATCC 49814]
gi|254043964|gb|ACT60759.1| Scaffold protein Nfu/NifU [Hirschia baltica ATCC 49814]
Length = 190
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVAL--HEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+ AE E + +RP + +DGG++ ++D VV L+++GAC CPSS MT+K GIE
Sbjct: 114 IVAEIKELIETRVRPAVANDGGDIIFEKFDVDTGVVTLQMRGACAGCPSSTMTLKSGIEN 173
Query: 140 RLMEKIPEIVAVESVA 155
L +PE+ AVE+ A
Sbjct: 174 MLRHYVPEVTAVEAAA 189
>gi|31874276|emb|CAD98142.1| hypothetical protein [Homo sapiens]
Length = 242
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 232
Query: 146 PEIVAVESV 154
PE+ VE V
Sbjct: 233 PEVEGVEQV 241
>gi|410901244|ref|XP_003964106.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Takifugu rubripes]
Length = 232
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V D V+LKL G+C CPSS +T+K GI+ L I
Sbjct: 143 IKELLDTRIRPTVQEDGGDVIFKGFDSGTVKLKLVGSCTGCPSSTVTLKNGIQNMLQFYI 202
Query: 146 PEIVAVESVADE 157
PE+ +VE V DE
Sbjct: 203 PEVDSVEQVEDE 214
>gi|340776902|ref|ZP_08696845.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter aceti
NBRC 14818]
Length = 187
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
+RP + SDGG++ +VRL +QGAC CPSS T+K G+E L +PEIV+VE
Sbjct: 125 VRPAVASDGGDIVFRGYREGIVRLSMQGACSGCPSSGATLKHGVENMLRHYVPEIVSVEQ 184
Query: 154 VAD 156
V D
Sbjct: 185 VVD 187
>gi|115390869|ref|XP_001212939.1| HIRA-interacting protein 5 [Aspergillus terreus NIH2624]
gi|114193863|gb|EAU35563.1| HIRA-interacting protein 5 [Aspergillus terreus NIH2624]
Length = 323
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + +V LKL+GAC +C SS +T++ GIE LM I
Sbjct: 218 IKELLDTRIRPAIQEDGGDIEFRGFENGIVMLKLRGACRTCDSSTVTLRNGIESMLMHYI 277
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVLEEIRPYLVGAAGGSLE 188
E+ VE V D E + ++E E+ L + + A+ G L+
Sbjct: 278 EEVQGVEQVMDAEEEISMHEFAKFEEKLRQQKGAQATASAGPLD 321
>gi|196003412|ref|XP_002111573.1| hypothetical protein TRIADDRAFT_55734 [Trichoplax adhaerens]
gi|190585472|gb|EDV25540.1| hypothetical protein TRIADDRAFT_55734 [Trichoplax adhaerens]
Length = 236
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP L DGG++ D +V+LK+QGAC SCPS+ +T+K GI+ L IPE+ VE
Sbjct: 159 IRPTLQEDGGDIVYMGYDNGIVKLKMQGACDSCPSATVTLKHGIQNMLQFYIPEVEGVEQ 218
Query: 154 VA 155
+
Sbjct: 219 IT 220
>gi|440907806|gb|ELR57903.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial,
partial [Bos grunniens mutus]
Length = 235
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 167 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 226
Query: 146 PEIVAVESV 154
PE+ VE V
Sbjct: 227 PEVEGVEQV 235
>gi|390954324|ref|YP_006418082.1| thioredoxin-like protein [Aequorivita sublithincola DSM 14238]
gi|390420310|gb|AFL81067.1| thioredoxin-like protein [Aequorivita sublithincola DSM 14238]
Length = 79
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
IE LDEIRP+L +DGG+++L I DG VV ++LQGAC C + MT+K G+E + +
Sbjct: 10 IEEALDEIRPFLQNDGGDISLVSIEDGKVVNVQLQGACVGCSVNQMTLKSGVEMTIKKYA 69
Query: 146 PEIVAVESVA 155
P+I V SV+
Sbjct: 70 PQIEKVVSVS 79
>gi|242011992|ref|XP_002426727.1| HIRA-interacting protein, putative [Pediculus humanus corporis]
gi|212510898|gb|EEB13989.1| HIRA-interacting protein, putative [Pediculus humanus corporis]
Length = 216
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG+V + +V+LKL G+C +CPSS++T+K GI+ L IPE++ VE
Sbjct: 128 IRPTVQEDGGDVVFKGFENGIVKLKLLGSCTTCPSSIVTLKNGIQNMLQFYIPEVLEVEQ 187
Query: 154 VADE 157
+ D+
Sbjct: 188 ILDD 191
>gi|210630137|ref|ZP_03296252.1| hypothetical protein COLSTE_00136 [Collinsella stercoris DSM 13279]
gi|210160610|gb|EEA91581.1| NifU-like protein [Collinsella stercoris DSM 13279]
Length = 93
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 90 VLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEI 148
VL++IRP L +DGG++A + D VV+L+LQGAC CP S +T+ MGIER L E +P +
Sbjct: 11 VLEQIRPNLQADGGDMAYVGVTDEGVVQLELQGACAGCPMSSLTLSMGIERILKEHVPGV 70
Query: 149 VAVESVA 155
VE V
Sbjct: 71 TRVEQVG 77
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAV 215
+ +NE+ + +VLE+IRP L A GG + V + DE +V++ + G AG +T+ + +
Sbjct: 1 MAVNEQLLLEVLEQIRPNLQ-ADGGDMAYVGVTDEGVVQLELQGACAGCPMSSLTLSMGI 59
Query: 216 TQKLREKIPAIAAVQ 230
+ L+E +P + V+
Sbjct: 60 ERILKEHVPGVTRVE 74
>gi|78186286|ref|YP_374329.1| NifU protein [Chlorobium luteolum DSM 273]
gi|78166188|gb|ABB23286.1| NifU protein, putative [Chlorobium luteolum DSM 273]
Length = 89
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ + + L+ +RPYL DGG+ L I + VV +KL GACGSCP S +T++ G+E+ + +
Sbjct: 19 DRVIAALETVRPYLQVDGGDCQLVGITKDMVVDVKLLGACGSCPMSTLTLRAGVEQAIKK 78
Query: 144 KIPEIVAVESV 154
IPEIV VESV
Sbjct: 79 AIPEIVRVESV 89
>gi|281346707|gb|EFB22291.1| hypothetical protein PANDA_002901 [Ailuropoda melanoleuca]
Length = 186
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 118 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 177
Query: 146 PEIVAVESV 154
PE+ VE V
Sbjct: 178 PEVEGVEQV 186
>gi|145219268|ref|YP_001129977.1| NifU domain-containing protein [Chlorobium phaeovibrioides DSM 265]
gi|145205432|gb|ABP36475.1| nitrogen-fixing NifU domain protein [Chlorobium phaeovibrioides DSM
265]
Length = 86
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ + + L+ +RPYL DGG+ L I + VV +KL GACGSCP S +T++ G+E+ + +
Sbjct: 16 DRVIAALETVRPYLQVDGGDCQLVGISKDMVVDVKLLGACGSCPMSTLTLRAGVEQAIKK 75
Query: 144 KIPEIVAVESV 154
IPEIV VESV
Sbjct: 76 AIPEIVRVESV 86
>gi|345314287|ref|XP_001517848.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like, partial [Ornithorhynchus anatinus]
Length = 134
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 96 PYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVA 155
P + DGG+V + VV+LKLQG+C SCPSS++T+K GI+ L IPE+ VE V
Sbjct: 63 PTVQEDGGDVIYRGFEDGVVQLKLQGSCTSCPSSIVTLKSGIQNMLQFYIPEVEGVEQVV 122
Query: 156 DEE 158
D+E
Sbjct: 123 DDE 125
>gi|313230549|emb|CBY18765.1| unnamed protein product [Oikopleura dioica]
Length = 146
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 48 CHSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLD-EIRPYLISDGGNVA 106
C + R L R +I P SA E+ I+ +LD IRP ++ DGG++A
Sbjct: 18 CDVNHRQFLAENR-TIMNGLISIFPQPKSANEV---VAMIKELLDTRIRPTVMEDGGDIA 73
Query: 107 L--HEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELN 164
+ D V++L L GAC +CPSSV+T+K G+E + IPEI VE + E L
Sbjct: 74 FVSFDPDTGVLQLSLIGACATCPSSVVTLKHGVENMMKFYIPEITEVEQILTAEQDLSNK 133
Query: 165 E-ENIEKVLEE 174
E E I K L++
Sbjct: 134 EFEKISKTLDK 144
>gi|346311545|ref|ZP_08853548.1| hypothetical protein HMPREF9452_01417 [Collinsella tanakaei YIT
12063]
gi|345900608|gb|EGX70428.1| hypothetical protein HMPREF9452_01417 [Collinsella tanakaei YIT
12063]
Length = 91
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 90 VLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEI 148
VL++IRP L +DGG++A +D + VV L+LQGAC CP S +T+ MG+ER L E +P +
Sbjct: 11 VLEQIRPNLQADGGDMAYVGVDDDGVVSLELQGACAGCPMSQLTLSMGVERILKEHVPGV 70
Query: 149 VAVESV 154
VE+V
Sbjct: 71 TRVEAV 76
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAGV----MTVRVAV 215
+ +NE+ + +VLE+IRP L A GG + V +D+ +V + + G AG +T+ + V
Sbjct: 1 MAVNEQLLLEVLEQIRPNLQ-ADGGDMAYVGVDDDGVVSLELQGACAGCPMSQLTLSMGV 59
Query: 216 TQKLREKIPAIAAVQ 230
+ L+E +P + V+
Sbjct: 60 ERILKEHVPGVTRVE 74
>gi|373111093|ref|ZP_09525353.1| hypothetical protein HMPREF9712_02946 [Myroides odoratimimus CCUG
10230]
gi|423132425|ref|ZP_17120075.1| hypothetical protein HMPREF9714_03475 [Myroides odoratimimus CCUG
12901]
gi|423135895|ref|ZP_17123540.1| hypothetical protein HMPREF9715_03315 [Myroides odoratimimus CIP
101113]
gi|423329614|ref|ZP_17307420.1| hypothetical protein HMPREF9711_02994 [Myroides odoratimimus CCUG
3837]
gi|371639496|gb|EHO05112.1| hypothetical protein HMPREF9714_03475 [Myroides odoratimimus CCUG
12901]
gi|371639630|gb|EHO05245.1| hypothetical protein HMPREF9715_03315 [Myroides odoratimimus CIP
101113]
gi|371641154|gb|EHO06741.1| hypothetical protein HMPREF9712_02946 [Myroides odoratimimus CCUG
10230]
gi|404603242|gb|EKB02917.1| hypothetical protein HMPREF9711_02994 [Myroides odoratimimus CCUG
3837]
Length = 79
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+N+E LDEIRP+L +DGG++ L +I D VV+++L+GAC +C + MT+ G+E + +
Sbjct: 8 QNVEKALDEIRPFLQADGGDITLIDIQDDKVVQVRLEGACTACSVNQMTLSAGVETTIKK 67
Query: 144 KIPEIVAVESVA 155
PEI +V +V
Sbjct: 68 YAPEIESVVNVG 79
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVTQKL 219
++N+EK L+EIRP+L A GG + L+ I D+ +V+VR+ G MT+ V +
Sbjct: 7 KQNVEKALDEIRPFL-QADGGDITLIDIQDDKVVQVRLEGACTACSVNQMTLSAGVETTI 65
Query: 220 REKIPAIAAV 229
++ P I +V
Sbjct: 66 KKYAPEIESV 75
>gi|408370686|ref|ZP_11168461.1| NifU-like/thioredoxin-like protein [Galbibacter sp. ck-I2-15]
gi|407743923|gb|EKF55495.1| NifU-like/thioredoxin-like protein [Galbibacter sp. ck-I2-15]
Length = 79
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
N+E L+EIRP+L SDGGN++L ID N V+++L+GAC C + MT+K G+E + +
Sbjct: 9 NVEKALEEIRPFLESDGGNISLVSIDDNKFVKVRLEGACVGCSVNQMTLKTGVEMTIKKY 68
Query: 145 IPEI 148
+P+I
Sbjct: 69 VPQI 72
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
Query: 167 NIEKVLEEIRPYLVGAAGGSLELVTIDE-PIVKVRITGPAAGV----MTVRVAVTQKLRE 221
N+EK LEEIRP+L + GG++ LV+ID+ VKVR+ G G MT++ V +++
Sbjct: 9 NVEKALEEIRPFL-ESDGGNISLVSIDDNKFVKVRLEGACVGCSVNQMTLKTGVEMTIKK 67
Query: 222 KIPAIAAV 229
+P I V
Sbjct: 68 YVPQIEKV 75
>gi|336272067|ref|XP_003350791.1| hypothetical protein SMAC_02461 [Sordaria macrospora k-hell]
gi|380094954|emb|CCC07456.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 290
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V+LKL+GAC +C SS +T+K GIE LM I E+ VE
Sbjct: 189 IRPAIQEDGGDIEFRGFEDGIVKLKLRGACRTCDSSTVTLKNGIEGMLMHYIEEVQGVEQ 248
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V D E + L E +K E+++
Sbjct: 249 VLDPEEDIALQE--FQKFEEKLK 269
>gi|295697085|ref|YP_003590323.1| nitrogen-fixing NifU domain-containing protein [Kyrpidia tusciae
DSM 2912]
gi|295412687|gb|ADG07179.1| nitrogen-fixing NifU domain protein [Kyrpidia tusciae DSM 2912]
Length = 277
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+ +VL+E+RPY+ S GG+V L +++ +VV ++L GAC C S +T++ G+E + ++P
Sbjct: 90 VAAVLEEVRPYMRSHGGDVELVKVEADVVYVRLHGACSGCSLSALTLRDGVEEAVKARVP 149
Query: 147 EIVAVESVADEETGLELNEENIE-------------KVLEEIRPYLVGAAGGSLELVTID 193
E+ VE DE + ++++ ++L + RP+ G ++ L+ +
Sbjct: 150 EVRRVEVAEDETVAGFIPLDDVDGLGNSGWLEGPPVELLADGRPFRFEQGGHNVLLIRVG 209
Query: 194 EPIVKVRITGPAAGV 208
I+ R P G+
Sbjct: 210 PKIMAYRNQCPHMGM 224
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 168 IEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAG----VMTVRVAVTQKLREKI 223
+ VLEE+RPY+ + GG +ELV ++ +V VR+ G +G +T+R V + ++ ++
Sbjct: 90 VAAVLEEVRPYMR-SHGGDVELVKVEADVVYVRLHGACSGCSLSALTLRDGVEEAVKARV 148
Query: 224 PAIAAVQL 231
P + V++
Sbjct: 149 PEVRRVEV 156
>gi|258516727|ref|YP_003192949.1| nitrogen-fixing NifU domain-containing protein [Desulfotomaculum
acetoxidans DSM 771]
gi|257780432|gb|ACV64326.1| nitrogen-fixing NifU domain protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 73
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E +E VL ++RPYL DGG+V L +I DG VV++KL+GAC P + +T+K GIER L
Sbjct: 3 EKVEEVLGKVRPYLQRDGGDVELVDITPDG-VVQVKLKGACSGUPGATITLKQGIERVLK 61
Query: 143 EKIPEIVAVESV 154
+++PE+ V V
Sbjct: 62 QEVPEVKGVVQV 73
>gi|375013379|ref|YP_004990367.1| thioredoxin-like protein [Owenweeksia hongkongensis DSM 17368]
gi|359349303|gb|AEV33722.1| thioredoxin-like protein [Owenweeksia hongkongensis DSM 17368]
Length = 213
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 8/91 (8%)
Query: 70 AVATPDSAIELPLTAENIE----SVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACG 124
+VA PD + P E IE S+LDE ++P + SDGGN+ + + V++ LQGAC
Sbjct: 123 SVAHPDE--KDPAEWEEIEKKIASLLDEYVKPAVASDGGNIKFLKYEDGAVKVLLQGACS 180
Query: 125 SCPSSVMTMKMGIERRLMEKIP-EIVAVESV 154
CPSS MT+K GI+ L E +P +I VE+V
Sbjct: 181 GCPSSTMTLKQGIQNLLQEMLPGQIRTVEAV 211
>gi|304320546|ref|YP_003854189.1| NifU-like domain-containing protein [Parvularcula bermudensis
HTCC2503]
gi|303299448|gb|ADM09047.1| NifU-like domain protein [Parvularcula bermudensis HTCC2503]
Length = 163
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 8/80 (10%)
Query: 83 TAENIESVLD----EIRPYLISDGGNVALHEI---DGNVVRLKLQGACGSCPSSVMTMKM 135
T E +E ++D +RP + DGG++ H DG +V L ++GAC CPSS MT+K
Sbjct: 85 TKEIVEQIIDLIETRVRPAVAQDGGDIVFHRFVPGDG-IVFLSMRGACSGCPSSTMTLKS 143
Query: 136 GIERRLMEKIPEIVAVESVA 155
GIE L +PE+ AVE+V
Sbjct: 144 GIENLLKHYVPEVTAVEAVG 163
>gi|418048249|ref|ZP_12686337.1| nitrogen-fixing NifU domain-containing protein [Mycobacterium
rhodesiae JS60]
gi|353193919|gb|EHB59423.1| nitrogen-fixing NifU domain-containing protein [Mycobacterium
rhodesiae JS60]
Length = 290
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+ LD +RPYL S GG+V L +I VVRL G+C SCPSS +T+++ + + P
Sbjct: 86 VSHALDTVRPYLGSHGGDVRLVDITDGVVRLAFSGSCKSCPSSTVTLELAVHDAVRAAAP 145
Query: 147 EIVAVESV 154
EIVA+E V
Sbjct: 146 EIVAIEVV 153
>gi|4140376|gb|AAD03815.1| NifU [Trichodesmium erythraeum IMS101]
Length = 179
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VL E+RP L DGG+V L ++DG+ V +KL+GACGSC + ++T+K IE L E++
Sbjct: 111 IQQVLQQEVRPVLAEDGGDVELFDVDGDRVLVKLKGACGSCSNVLVTLKGAIEATLKERV 170
Query: 146 PEIVAVESV 154
E + VE+V
Sbjct: 171 SESLVVEAV 179
>gi|289548959|ref|YP_003473947.1| nitrogen-fixing NifU domain-containing protein [Thermocrinis albus
DSM 14484]
gi|289182576|gb|ADC89820.1| nitrogen-fixing NifU domain protein [Thermocrinis albus DSM 14484]
Length = 85
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 83 TAENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIERR 140
T E IE+VLDEIRP L DGG+V L ++ DG V+ +++ GAC C SV+T+K GIER
Sbjct: 3 TREEIEAVLDEIRPALRFDGGDVELVDVLEDGTVL-VRMIGACAGCGMSVLTLKAGIERA 61
Query: 141 LMEKIPEIVAVESV 154
L + P+I V+ V
Sbjct: 62 LKSRFPDIKEVKDV 75
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAG----VMTVRVAVTQKLR 220
E IE VL+EIRP L GG +ELV + ++ V VR+ G AG V+T++ + + L+
Sbjct: 5 EEIEAVLDEIRPAL-RFDGGDVELVDVLEDGTVLVRMIGACAGCGMSVLTLKAGIERALK 63
Query: 221 EKIPAIAAVQ 230
+ P I V+
Sbjct: 64 SRFPDIKEVK 73
>gi|125550903|gb|EAY96612.1| hypothetical protein OsI_18522 [Oryza sativa Indica Group]
Length = 272
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALH 108
+SS + L + AA + A+ DS I + + E +E+ IRP + DGG++
Sbjct: 157 YSSGQSLFLDSSTAASMDT--AIHEDDSEI-VAMIKELLET---RIRPAVQDDGGDIEYR 210
Query: 109 EID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELN 164
D +V+LK+QGAC CPSS +T+K GIE LM +PE+ VE D + EL
Sbjct: 211 GFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDGDEEAELT 268
>gi|115462181|ref|NP_001054690.1| Os05g0155300 [Oryza sativa Japonica Group]
gi|54291852|gb|AAV32220.1| unknown protein [Oryza sativa Japonica Group]
gi|113578241|dbj|BAF16604.1| Os05g0155300 [Oryza sativa Japonica Group]
gi|215697325|dbj|BAG91319.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630253|gb|EEE62385.1| hypothetical protein OsJ_17174 [Oryza sativa Japonica Group]
Length = 272
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALH 108
+SS + L + AA + A+ DS I + + E +E+ IRP + DGG++
Sbjct: 157 YSSGQSLFLDSSTAASMDT--AIHEDDSEI-VAMIKELLET---RIRPAVQDDGGDIEYR 210
Query: 109 EID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELN 164
D +V+LK+QGAC CPSS +T+K GIE LM +PE+ VE D + EL
Sbjct: 211 GFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDGDEEAELT 268
>gi|319891909|ref|YP_004148784.1| nitrogen-fixing NifU domain-containing protein [Staphylococcus
pseudintermedius HKU10-03]
gi|386319829|ref|YP_006015992.1| nitrogen fixation protein NifU [Staphylococcus pseudintermedius
ED99]
gi|317161605|gb|ADV05148.1| Nitrogen-fixing NifU domain protein [Staphylococcus
pseudintermedius HKU10-03]
gi|323465000|gb|ADX77153.1| nitrogen fixation protein NifU [Staphylococcus pseudintermedius
ED99]
Length = 80
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 44/57 (77%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
+ + V++++RP+L+ DGG+ L +++ +V+L+L GACG+CPSS +T+K GIER L
Sbjct: 10 DQVAEVIEKLRPFLLRDGGDCELVDVEDGIVKLQLLGACGTCPSSTITLKAGIERAL 66
>gi|167037171|ref|YP_001664749.1| NifU domain-containing protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|167040690|ref|YP_001663675.1| NifU domain-containing protein [Thermoanaerobacter sp. X514]
gi|256751269|ref|ZP_05492149.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914731|ref|ZP_07132047.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X561]
gi|307724035|ref|YP_003903786.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
sp. X513]
gi|320115589|ref|YP_004185748.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|166854930|gb|ABY93339.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X514]
gi|166856005|gb|ABY94413.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256749824|gb|EEU62848.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889666|gb|EFK84812.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X561]
gi|307581096|gb|ADN54495.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter sp. X513]
gi|319928680|gb|ADV79365.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 73
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E VL+ +RP L +DGG+V L ++ + +V+++L GACG CP + +T+K GIER + E
Sbjct: 3 ERVEEVLELLRPSLQADGGDVELIDVTEDGIVKVRLTGACGGCPFATLTLKEGIERAIKE 62
Query: 144 KIPEIVAVESV 154
+IPE+ V +V
Sbjct: 63 EIPEVKEVIAV 73
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAG----VMTVRVAVTQKLR 220
E +E+VLE +RP L A GG +EL+ + E IVKVR+TG G +T++ + + ++
Sbjct: 3 ERVEEVLELLRPSL-QADGGDVELIDVTEDGIVKVRLTGACGGCPFATLTLKEGIERAIK 61
Query: 221 EKIPAIAAV 229
E+IP + V
Sbjct: 62 EEIPEVKEV 70
>gi|83944990|ref|ZP_00957356.1| nifU domain protein [Oceanicaulis sp. HTCC2633]
gi|83851772|gb|EAP89627.1| nifU domain protein [Oceanicaulis sp. HTCC2633]
Length = 186
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEID--GNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
+ I+ V+D +RP + DGG++ H D VV L ++GAC CPSS MT+K GIE L
Sbjct: 113 KEIKDVIDTRVRPAVARDGGDIVFHSYDEATGVVNLHMRGACAGCPSSTMTLKQGIENLL 172
Query: 142 MEKIPEIVAVESV 154
+PE+ +VE+V
Sbjct: 173 KHYVPEVSSVEAV 185
>gi|339018375|ref|ZP_08644512.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
tropicalis NBRC 101654]
gi|338752550|dbj|GAA07816.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
tropicalis NBRC 101654]
Length = 187
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E I+ +LD +RP + DGG++ VVRL +QGAC CPSS T+K G+E L
Sbjct: 115 EQIKELLDTRVRPAVAGDGGDIVFRGYRDGVVRLTMQGACSGCPSSRATLKHGVENMLRH 174
Query: 144 KIPEIVAVESV 154
+PE+V VE V
Sbjct: 175 YVPEVVGVEQV 185
>gi|329891163|ref|ZP_08269506.1| scaffold protein Nfu/NifU family protein [Brevundimonas diminuta
ATCC 11568]
gi|328846464|gb|EGF96028.1| scaffold protein Nfu/NifU family protein [Brevundimonas diminuta
ATCC 11568]
Length = 185
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 72 ATPDSAIELPLTAENIESVLDE-IRPYLISDGGNVALHEID--GNVVRLKLQGACGSCPS 128
AT D+ + + AE I+S+LD IRP + DGG++ D V+RL+++GAC CPS
Sbjct: 100 ATEDAGEDTEIVAE-IKSLLDSRIRPAVAQDGGDILFDHFDEETGVLRLRMRGACAGCPS 158
Query: 129 SVMTMKMGIERRLMEKIPEIVAVESV 154
S T+K G+E+ + +PE+ +VE V
Sbjct: 159 SSATLKAGVEQMMRHYVPEVTSVEQV 184
>gi|163797123|ref|ZP_02191078.1| nitrogen-fixing NifU-like protein [alpha proteobacterium BAL199]
gi|159177639|gb|EDP62192.1| nitrogen-fixing NifU-like protein [alpha proteobacterium BAL199]
Length = 187
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 62 AARRNVIK---AVATPDSAIELPLTAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRL 117
A R +++ + + P+ A E I+ +LD +RP + DGG++ + VV L
Sbjct: 88 AGRPTIVEDGASASAPEDAGEDTEIVSQIKELLDTRVRPAVAMDGGDITFQGYEDGVVTL 147
Query: 118 KLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVA 155
++QGAC CPSS T+KMGIE L IPE+ V + A
Sbjct: 148 QMQGACSGCPSSTATLKMGIENMLRHYIPEVREVRAAA 185
>gi|344923779|ref|ZP_08777240.1| thioredoxin [Candidatus Odyssella thessalonicensis L13]
Length = 183
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I+ ++D +RP + DGG++ H + +V LK+QGAC CPSS T+K GIE L
Sbjct: 112 QQIKELIDTRVRPAVAQDGGDILFHAFENGIVYLKMQGACSGCPSSTATLKSGIENMLRY 171
Query: 144 KIPEIVAVESV 154
IPE+ V +V
Sbjct: 172 YIPEVEEVRAV 182
>gi|330799706|ref|XP_003287883.1| hypothetical protein DICPUDRAFT_20344 [Dictyostelium purpureum]
gi|325082086|gb|EGC35580.1| hypothetical protein DICPUDRAFT_20344 [Dictyostelium purpureum]
Length = 203
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP ++ DGGN+ +V ++LQG C SC SS T+K GIER LM I E+ V +
Sbjct: 129 IRPTVLEDGGNIKYMGFADGIVLVQLQGTCSSCSSSQATLKGGIERMLMHWIAEVKGVVA 188
Query: 154 VADEETGLELNEENIE 169
++D+ ELNE N+E
Sbjct: 189 ISDD----ELNELNLE 200
>gi|302381462|ref|YP_003817285.1| Scaffold protein Nfu/NifU [Brevundimonas subvibrioides ATCC 15264]
gi|302192090|gb|ADK99661.1| Scaffold protein Nfu/NifU [Brevundimonas subvibrioides ATCC 15264]
Length = 185
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
I+S+LD IRP + DGG++ D V+RL+++GAC CPSS MT+K G+E+ +
Sbjct: 114 IKSLLDSRIRPAVAQDGGDILFDAFDEESGVLRLRMRGACAGCPSSAMTLKAGVEQMMRH 173
Query: 144 KIPEIVAVESV 154
+PE+ +VE V
Sbjct: 174 YVPEVTSVEQV 184
>gi|125995235|dbj|BAF47150.1| NifU [Gloeothece sp. KO68DGA]
Length = 293
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 15/98 (15%)
Query: 62 AARRNVIKAVATPDSAIELPLTAENIESVL-------DEIRPYLISDGGNVALHEIDGNV 114
A V+KA + P PLT NI+ + +E++P L DGG+ L ++DG++
Sbjct: 201 AVATEVVKAKSEPK-----PLT--NIQKITLIQQVLEEEVKPALAQDGGDCDLFDVDGDL 253
Query: 115 VRLKLQGACGSCPSSVMTMKMGIERRLMEKI-PEIVAV 151
V++ L+GACGSC SS T+K+ IE RL ++I PE+ +
Sbjct: 254 VKVVLKGACGSCASSTQTLKIAIEARLRDRISPELTVI 291
>gi|384097413|ref|ZP_09998534.1| NifU-like/thioredoxin-like protein [Imtechella halotolerans K1]
gi|383837381|gb|EID76781.1| NifU-like/thioredoxin-like protein [Imtechella halotolerans K1]
Length = 79
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 55/79 (69%), Gaps = 5/79 (6%)
Query: 82 LTAE----NIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMG 136
+TAE N+E L+EIRP+L SDGGN++L I DG +VR++L+GAC +C + MT++ G
Sbjct: 1 MTAEELKLNVEKALNEIRPFLESDGGNISLVGIEDGKLVRVRLEGACVACSVNQMTLRSG 60
Query: 137 IERRLMEKIPEIVAVESVA 155
+E + + P+I V +V+
Sbjct: 61 VEMTIKKYAPQIETVINVS 79
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 167 NIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVTQKLRE 221
N+EK L EIRP+L + GG++ LV I D +V+VR+ G MT+R V +++
Sbjct: 9 NVEKALNEIRPFL-ESDGGNISLVGIEDGKLVRVRLEGACVACSVNQMTLRSGVEMTIKK 67
Query: 222 KIPAIAAV 229
P I V
Sbjct: 68 YAPQIETV 75
>gi|339483427|ref|YP_004695213.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. Is79A3]
gi|338805572|gb|AEJ01814.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. Is79A3]
Length = 186
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 62 AARRNVIKAVATPDSAIELPLTAENIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQ 120
AA NV+ ++ D L E I +LDE +RPYL DGG++ + ++GNV+R+ Q
Sbjct: 99 AAASNVLADLSPEDQ-----LRLEKINVLLDEEVRPYLQHDGGDLHILGLEGNVLRIHYQ 153
Query: 121 GACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
GACG+CPSS+ GIE L P+I + S
Sbjct: 154 GACGTCPSSISGTLKGIENMLKTIEPDIQVIAS 186
>gi|325187609|emb|CCA22145.1| ironsulfur cluster scaffold protein Nfulike protein putative
[Albugo laibachii Nc14]
Length = 287
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
I+ +L++ IRP + DGG++ + D +V+L+L GAC CPSS +T+K G+E L
Sbjct: 189 IKELLEQRIRPSVQDDGGDIFYKDFDVERGIVKLQLAGACAGCPSSSVTLKSGVENMLKY 248
Query: 144 KIPEIVAVESVADEETGLELNEENIEKVLEEIR 176
IPE+ +E V D E ELN++ + E++R
Sbjct: 249 YIPEVQGIEEVNDAELE-ELNKKEFKTFEEKLR 280
>gi|194334614|ref|YP_002016474.1| nitrogen-fixing NifU domain-containing protein [Prosthecochloris
aestuarii DSM 271]
gi|194312432|gb|ACF46827.1| nitrogen-fixing NifU domain protein [Prosthecochloris aestuarii DSM
271]
Length = 86
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ + + L+++RPYL +DGG+ L I + VV +KL GACGSCP S +T++ G+E+ + +
Sbjct: 16 DRVINALEDVRPYLQADGGDCQLVGITKDMVVDVKLLGACGSCPMSTLTLRAGVEQAVKK 75
Query: 144 KIPEIVAVESV 154
IPE+ VESV
Sbjct: 76 AIPEVARVESV 86
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKLR 220
+ + LE++RPYL A GG +LV I + +V V++ G +T+R V Q ++
Sbjct: 16 DRVINALEDVRPYL-QADGGDCQLVGITKDMVVDVKLLGACGSCPMSTLTLRAGVEQAVK 74
Query: 221 EKIPAIAAVQ 230
+ IP +A V+
Sbjct: 75 KAIPEVARVE 84
>gi|218961333|ref|YP_001741108.1| NifU-like domain protein [Candidatus Cloacamonas acidaminovorans]
gi|167729990|emb|CAO80902.1| NifU-like domain protein [Candidatus Cloacamonas acidaminovorans
str. Evry]
Length = 75
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERR 140
+ E IES+L ++RP + +DGG+V L I + NV+ ++L+G C CP + +T+K GIER
Sbjct: 2 IAKEKIESILAKVRPSIQADGGDVELINIREDNVIEVRLKGTCNGCPMATLTLKAGIERL 61
Query: 141 LMEKIPEIVAVESV 154
+ E+IPE+ V +V
Sbjct: 62 IKEEIPEVKEVIAV 75
Score = 36.2 bits (82), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAG----VMTVRVAVTQKL 219
+E IE +L ++RP + A GG +EL+ I E +++VR+ G G +T++ + + +
Sbjct: 4 KEKIESILAKVRPS-IQADGGDVELINIREDNVIEVRLKGTCNGCPMATLTLKAGIERLI 62
Query: 220 REKIPAIAAV 229
+E+IP + V
Sbjct: 63 KEEIPEVKEV 72
>gi|58039243|ref|YP_191207.1| NifU protein [Gluconobacter oxydans 621H]
gi|58001657|gb|AAW60551.1| NifU protein [Gluconobacter oxydans 621H]
Length = 212
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD +RP + DGG++A VV L +QGAC CPSS T+K G+E L +
Sbjct: 142 IQDLLDTRVRPAVAGDGGDIAFRGYKDGVVYLAMQGACSGCPSSRATLKHGVENMLRHYV 201
Query: 146 PEIVAVESVAD 156
PE+ +VE V D
Sbjct: 202 PEVASVEQVED 212
>gi|297544959|ref|YP_003677261.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296842734|gb|ADH61250.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 73
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E +E VL+ +RP L +DGG+V L ++ DG +V+++L GACG CP + +T+K GIER +
Sbjct: 3 ERVEEVLELLRPSLQADGGDVELIDVTKDG-IVKIRLTGACGGCPFATLTLKEGIERAIK 61
Query: 143 EKIPEIVAVESV 154
E+IPE+ V +V
Sbjct: 62 EEIPEVKEVIAV 73
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAG----VMTVRVAVTQKLR 220
E +E+VLE +RP L A GG +EL+ + + IVK+R+TG G +T++ + + ++
Sbjct: 3 ERVEEVLELLRPSL-QADGGDVELIDVTKDGIVKIRLTGACGGCPFATLTLKEGIERAIK 61
Query: 221 EKIPAIAAV 229
E+IP + V
Sbjct: 62 EEIPEVKEV 70
>gi|340617280|ref|YP_004735733.1| NifU family protein [Zobellia galactanivorans]
gi|339732077|emb|CAZ95345.1| NifU family protein [Zobellia galactanivorans]
Length = 79
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+N+E L+EIRP+L SDGG+++L ID N V++KL+GAC C + MT+K G+E + +
Sbjct: 8 QNVEKALEEIRPFLQSDGGDISLISIDNENSVKVKLEGACVGCSVNQMTLKSGVEMTIKK 67
Query: 144 KIPEIVAVESVA 155
P+I V +VA
Sbjct: 68 YAPQIEEVINVA 79
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTID-EPIVKVRITGPAAGV----MTVRVAVTQKLR 220
+N+EK LEEIRP+L + GG + L++ID E VKV++ G G MT++ V ++
Sbjct: 8 QNVEKALEEIRPFL-QSDGGDISLISIDNENSVKVKLEGACVGCSVNQMTLKSGVEMTIK 66
Query: 221 EKIPAIAAV 229
+ P I V
Sbjct: 67 KYAPQIEEV 75
>gi|9081905|gb|AAF82636.1|AF167538_3 NifU [Trichodesmium erythraeum IMS101]
Length = 291
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VL E+RP L DGG+V L ++DG+ V +KL+GACGSC + ++T+K IE L E++
Sbjct: 223 IQQVLQQEVRPVLAEDGGDVELFDVDGDRVLVKLKGACGSCSNVLVTLKGAIEATLKERV 282
Query: 146 PEIVAVESV 154
E + VE+V
Sbjct: 283 SESLVVEAV 291
>gi|113477555|ref|YP_723616.1| Fe-S cluster assembly protein NifU [Trichodesmium erythraeum
IMS101]
gi|110168603|gb|ABG53143.1| Fe-S cluster assembly protein NifU [Trichodesmium erythraeum
IMS101]
Length = 291
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VL E+RP L DGG+V L ++DG+ V +KL+GACGSC + ++T+K IE L E++
Sbjct: 223 IQQVLQQEVRPVLAEDGGDVELFDVDGDRVLVKLKGACGSCSNVLVTLKGAIEATLKERV 282
Query: 146 PEIVAVESV 154
E + VE+V
Sbjct: 283 SESLVVEAV 291
>gi|328872467|gb|EGG20834.1| NIF system FeS cluster assembly domain-containing protein
[Dictyostelium fasciculatum]
Length = 313
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 40/65 (61%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP L+ DGGN+ +V +KLQG C SC SS T+K GIER LM I E+ + +
Sbjct: 228 IRPTLLDDGGNIQYLGFKDGIVLVKLQGTCSSCSSSQATLKGGIERMLMHWISEVRGIMA 287
Query: 154 VADEE 158
V D+E
Sbjct: 288 VTDDE 292
>gi|255038680|ref|YP_003089301.1| nitrogen-fixing NifU domain-containing protein [Dyadobacter
fermentans DSM 18053]
gi|254951436|gb|ACT96136.1| nitrogen-fixing NifU domain protein [Dyadobacter fermentans DSM
18053]
Length = 85
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 83 TAENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
T E IE L+ +RPYL +DGG+V E+ D +V+L+LQG+C SCP S MT + G+E +
Sbjct: 7 TIELIEQALETVRPYLHADGGDVKFVELTDDLIVKLELQGSCQSCPMSAMTFRAGLEESI 66
Query: 142 MEKIPEIVAVES 153
+ +P I V S
Sbjct: 67 RKAVPYINKVVS 78
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKLR 220
E IE+ LE +RPYL A GG ++ V + D+ IVK+ + G MT R + + +R
Sbjct: 9 ELIEQALETVRPYL-HADGGDVKFVELTDDLIVKLELQGSCQSCPMSAMTFRAGLEESIR 67
Query: 221 EKIPAIAAV 229
+ +P I V
Sbjct: 68 KAVPYINKV 76
>gi|425772864|gb|EKV11248.1| NifU-related protein [Penicillium digitatum PHI26]
gi|425782025|gb|EKV19956.1| NifU-related protein [Penicillium digitatum Pd1]
Length = 311
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V LKL+GAC +C SS +T+K GIE LM I E+ VE
Sbjct: 214 IRPAIQEDGGDIEFKGFEDGIVMLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVKGVEQ 273
Query: 154 VADEETGLELNEENIEKVLEEIR 176
DEE + ++E K E++R
Sbjct: 274 AMDEEEIISMHE--FSKFEEKLR 294
>gi|242308908|ref|ZP_04808063.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239524572|gb|EEQ64438.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 81
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI- 145
+E V++++RP LI+DGGNV L +I+ V ++L+GAC CPSS T+K GIER L +I
Sbjct: 13 VEMVIEKVRPMLINDGGNVTLLKIENGKVYVRLEGACKGCPSSSQTLKFGIERALKNEIH 72
Query: 146 PEI 148
P+I
Sbjct: 73 PDI 75
>gi|357134577|ref|XP_003568893.1| PREDICTED: nifU-like protein 4, mitochondrial-like [Brachypodium
distachyon]
Length = 268
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALH 108
+SS + L + AA + A+ DS I + + E +E+ IRP + DGG++
Sbjct: 153 YSSGQPLFLDSNTAAAMDT--AIHEDDSEI-VAMIKELLET---RIRPAVQDDGGDIEYR 206
Query: 109 EID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLEL 163
D +V+LK+QGAC CPSS +T+K GIE LM +PE+ VE D + EL
Sbjct: 207 GFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFDGDEEAEL 263
>gi|330991171|ref|ZP_08315124.1| NFU1 iron-sulfur cluster scaffold-like protein [Gluconacetobacter
sp. SXCC-1]
gi|329761757|gb|EGG78248.1| NFU1 iron-sulfur cluster scaffold-like protein [Gluconacetobacter
sp. SXCC-1]
Length = 187
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I+ +LD +RP + DGG++ VVRL +QGAC CPSS T+K G+E L
Sbjct: 115 QQIKELLDTRVRPAVAGDGGDIVFRGYRDGVVRLTMQGACSGCPSSRATLKHGVENMLRH 174
Query: 144 KIPEIVAVESV 154
+PE+V+VE V
Sbjct: 175 YVPEVVSVEQV 185
>gi|349687357|ref|ZP_08898499.1| nitrogen fixing thioredoxin-like protein [Gluconacetobacter
oboediens 174Bp2]
Length = 187
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I+ +LD +RP + DGG++ VVRL +QGAC CPSS T+K G+E L
Sbjct: 115 QQIKELLDTRVRPAVAGDGGDIVFRGYRDGVVRLTMQGACSGCPSSRATLKHGVENMLRH 174
Query: 144 KIPEIVAVESV 154
+PE+V+VE V
Sbjct: 175 YVPEVVSVEQV 185
>gi|187250677|ref|YP_001875159.1| thioredoxin-like protein [Elusimicrobium minutum Pei191]
gi|186970837|gb|ACC97822.1| Thioredoxin-like protein [Elusimicrobium minutum Pei191]
Length = 74
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEIDGNV--VRLKLQGACGSCPSSVMTMKMGIERRLME 143
IE V+ +I+P L +DGG++ D N V + L+G CG CP++ MT+K IER++M+
Sbjct: 4 KIEEVIAKIKPVLQADGGDLEFVSFDENTGTVYVSLKGRCGGCPAAQMTLKAVIERKIMQ 63
Query: 144 KIPEIVAVESV 154
+IPE+ AVE V
Sbjct: 64 EIPEVKAVERV 74
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 167 NIEKVLEEIRPYLVGAAGGSLELVTIDEPI------VKVRITGPAAGVMTVRVAVTQKLR 220
IE+V+ +I+P L A GG LE V+ DE +K R G A MT++ + +K+
Sbjct: 4 KIEEVIAKIKPVL-QADGGDLEFVSFDENTGTVYVSLKGRCGGCPAAQMTLKAVIERKIM 62
Query: 221 EKIPAIAAVQ 230
++IP + AV+
Sbjct: 63 QEIPEVKAVE 72
>gi|296533479|ref|ZP_06896057.1| NifU domain protein [Roseomonas cervicalis ATCC 49957]
gi|296266192|gb|EFH12239.1| NifU domain protein [Roseomonas cervicalis ATCC 49957]
Length = 187
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 75 DSAIEL--PLTAE---NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPS 128
D+A+E P AE I+ +LD +RP + DGG++ +V+L LQGAC CPS
Sbjct: 100 DAALEDSDPADAEIVAQIKELLDTRVRPAVAGDGGDIVFRGFRDGIVKLHLQGACSGCPS 159
Query: 129 SVMTMKMGIERRLMEKIPEIVAVESV 154
S T+K G+E L +PE++AVE V
Sbjct: 160 SRATLKHGVENMLRHYVPEVMAVEQV 185
>gi|162147187|ref|YP_001601648.1| nitrogen fixation protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209544240|ref|YP_002276469.1| Scaffold protein Nfu/NifU [Gluconacetobacter diazotrophicus PAl 5]
gi|161785764|emb|CAP55335.1| putative nitrogen fixation protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531917|gb|ACI51854.1| Scaffold protein Nfu/NifU [Gluconacetobacter diazotrophicus PAl 5]
Length = 187
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 75 DSAIELPLTAENIESVLDEI--------RPYLISDGGNVALHEIDGNVVRLKLQGACGSC 126
D+A+E L A E ++ +I RP + DGG++ VVRL +QGAC C
Sbjct: 98 DAAVEEELIAPEDEEIVRQIKELLDTRVRPAVAGDGGDIVFRGYRDGVVRLTMQGACSGC 157
Query: 127 PSSVMTMKMGIERRLMEKIPEIVAVESV 154
PSS T+K G+E L +PE+V+VE V
Sbjct: 158 PSSRATLKHGVENMLRHYVPEVVSVEQV 185
>gi|254421266|ref|ZP_05034984.1| Fe-S cluster assembly protein NifU [Synechococcus sp. PCC 7335]
gi|196188755|gb|EDX83719.1| Fe-S cluster assembly protein NifU [Synechococcus sp. PCC 7335]
Length = 294
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 10/112 (8%)
Query: 48 CHSSCRLLLI---RKRGAARRNVIKAVATPDSAIELPLTAEN----IESVL-DEIRPYLI 99
C + LLI ++R A V VA+ A PLT I+ V+ +++RP L+
Sbjct: 182 CQAGIEDLLIEVQQERTALSARVASEVAS--QATNKPLTPMQKINLIQQVIAEDVRPILL 239
Query: 100 SDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
+DGG++ L+++DG+VVR+ L GACG C SS T+K IE L K+ + V
Sbjct: 240 ADGGDIELYDVDGDVVRVLLTGACGGCASSSETLKNSIETSLQAKVSSTIVV 291
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES-VADEETGLELNE--------EN 167
+K G CG+C + GIE L+E E A+ + VA E N+
Sbjct: 173 VKAGGGCGTC-------QAGIEDLLIEVQQERTALSARVASEVASQATNKPLTPMQKINL 225
Query: 168 IEKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVM----TVRVAVTQKLREK 222
I++V+ E++RP L+ A GG +EL +D +V+V +TG G T++ ++ L+ K
Sbjct: 226 IQQVIAEDVRPILL-ADGGDIELYDVDGDVVRVLLTGACGGCASSSETLKNSIETSLQAK 284
Query: 223 IPAIAAV 229
+ + V
Sbjct: 285 VSSTIVV 291
>gi|299469630|emb|CBN76484.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 282
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNV--VRLKLQGACGSCPSSVMTMKMGIERRLME 143
I+ +L E +RP + DGG++ D N V ++L G+C CPSS +T+K G+E+ LM
Sbjct: 183 IKELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGCPSSTVTLKNGVEKMLMH 242
Query: 144 KIPEIVAVESVADEETGLELNEENIEKVLEEIR 176
IPE+ AV +V DEE ++N++ + ++ + ++
Sbjct: 243 YIPEVTAVNAVEDEELK-QVNQKEVNELEDRLK 274
>gi|332028326|gb|EGI68373.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Acromyrmex echinatior]
Length = 211
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 58/93 (62%), Gaps = 9/93 (9%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ E +V+LK+QG+C +CPSSV+T++ G++ + I
Sbjct: 118 IKELLDTRIRPTVQEDGGDIGFEE---GIVKLKMQGSCTNCPSSVVTLRNGVQNMMQFYI 174
Query: 146 PEIVAVESVADE-----ETGLELNEENIEKVLE 173
PE++ V V DE E + E+NI+K+ E
Sbjct: 175 PEVLGVIQVEDETDKITEKEFQKFEQNIKKMEE 207
>gi|218778425|ref|YP_002429743.1| nitrogen-fixing NifU domain-containing protein [Desulfatibacillum
alkenivorans AK-01]
gi|218759809|gb|ACL02275.1| nitrogen-fixing NifU domain protein [Desulfatibacillum alkenivorans
AK-01]
Length = 74
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +++ +DEIRP L DGG+V L E+ D VV+++L GAC CP S T+K GIE+ + +
Sbjct: 3 EQVKAAIDEIRPTLQRDGGDVELVEVGDDGVVKVRLVGACKGCPMSQQTLKNGIEKYMKK 62
Query: 144 KIPEIVAVESV 154
IP + +VE V
Sbjct: 63 NIPGVKSVEGV 73
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVTQKL 219
+E ++ ++EIRP L GG +ELV + D+ +VKVR+ G G T++ + + +
Sbjct: 2 KEQVKAAIDEIRPTLQ-RDGGDVELVEVGDDGVVKVRLVGACKGCPMSQQTLKNGIEKYM 60
Query: 220 REKIPAIAAVQ 230
++ IP + +V+
Sbjct: 61 KKNIPGVKSVE 71
>gi|88608783|ref|YP_506689.1| NifU-like domain-containing protein [Neorickettsia sennetsu str.
Miyayama]
gi|88600952|gb|ABD46420.1| NifU-like domain protein [Neorickettsia sennetsu str. Miyayama]
Length = 180
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 84 AENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
++ I+ ++D ++RP +I DGGN+ +V LKLQGAC CPS+ +T+K GIE L
Sbjct: 109 SKKIQEIIDTKVRPSVIEDGGNIVFKGYKDGIVYLKLQGACAGCPSASVTLKDGIENLLQ 168
Query: 143 EKIPEIVAVESV 154
IPE+ V+ V
Sbjct: 169 YYIPEVREVQQV 180
>gi|383852412|ref|XP_003701722.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Megachile rotundata]
Length = 276
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + +V+LK+QG+C SCPSSV+T++ G++ + I
Sbjct: 180 IKELLDTRIRPTVQEDGGDIVFMGFEEGIVKLKMQGSCTSCPSSVVTLRNGVQNMMQFYI 239
Query: 146 PEIVAVESVADE 157
PE++ V V DE
Sbjct: 240 PEVLGVVQVEDE 251
>gi|254454487|ref|ZP_05067924.1| NifU domain protein [Octadecabacter arcticus 238]
gi|198268893|gb|EDY93163.1| NifU domain protein [Octadecabacter arcticus 238]
Length = 183
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + VV L+LQGAC CPSS T+K GIE L
Sbjct: 114 QIKELLDTRVRPAVAQDGGDILFHGFERGVVYLQLQGACSGCPSSTATLKGGIENMLRHY 173
Query: 145 IPEIVAVESV 154
IP+++ V ++
Sbjct: 174 IPDVIEVRAI 183
>gi|322798976|gb|EFZ20436.1| hypothetical protein SINV_01605 [Solenopsis invicta]
Length = 226
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + +V+LK+QG+C +CPSSV+T++ G++ + I
Sbjct: 132 IKELLDTRIRPTVQEDGGDIVFVGFEEGIVKLKMQGSCTNCPSSVVTLRNGVQNMMQFYI 191
Query: 146 PEIVAVESVADE-----ETGLELNEENIEKVLE 173
PE++ V V DE E + E+ I KV E
Sbjct: 192 PEVLGVIQVEDETDKVAEKEFQKFEQKINKVKE 224
>gi|213512278|ref|NP_001134266.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Salmo
salar]
gi|209731958|gb|ACI66848.1| NFU1 iron-sulfur cluster scaffold homolog [Salmo salar]
Length = 263
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP ++ DGG+V + V+LKL G+C CPSS +T+K GI+ L I
Sbjct: 173 IKELLDTRIRPTVMEDGGDVIFKGFENGTVKLKLVGSCTGCPSSTVTLKNGIQNMLQFYI 232
Query: 146 PEIVAVESVADE 157
PE+ VE V DE
Sbjct: 233 PEVDDVEQVEDE 244
>gi|349701076|ref|ZP_08902705.1| nitrogen fixing thioredoxin-like protein [Gluconacetobacter
europaeus LMG 18494]
Length = 187
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I+ +LD +RP + DGG++ VVRL +QGAC CPSS T+K G+E L
Sbjct: 115 QQIKELLDTRVRPAVAGDGGDIVFRGYRDGVVRLTMQGACSGCPSSRATLKHGVENMLRH 174
Query: 144 KIPEIVAVESV 154
+PE+V+VE V
Sbjct: 175 YVPEVVSVEQV 185
>gi|171689560|ref|XP_001909720.1| hypothetical protein [Podospora anserina S mat+]
gi|170944742|emb|CAP70853.1| unnamed protein product [Podospora anserina S mat+]
Length = 323
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V LKL+GAC +C SS +T+K GIE LM I E+ VE
Sbjct: 223 IRPAIQEDGGDIEFRGFENGIVMLKLRGACRTCDSSTVTLKNGIEGMLMHYIEEVQGVEQ 282
Query: 154 VADEETGLELNE 165
V DEE + + E
Sbjct: 283 VLDEEEEIAIKE 294
>gi|94498004|ref|ZP_01304568.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. SKA58]
gi|94422587|gb|EAT07624.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. SKA58]
Length = 194
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 9 SYSRPHQTLDSPSCSR--PASKSTKSFFG-ERVSLT-----RWRNP--------VCHSSC 52
++ P + SP S T FFG + +S+T WR+ + H S
Sbjct: 32 DFASPEEAEASPLASALFTLGDVTGVFFGGDFISVTIGEGSDWRDVKPEVLSILLEHFSA 91
Query: 53 RLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLD----EIRPYLISDGGNVALH 108
+ L A I A D+ E P AE ++ + + +RP + +DGG++
Sbjct: 92 NMPLFVAGSAGE---IHVPADDDAFAENPEDAEIVDQIRELIDTRVRPAVANDGGDIIYR 148
Query: 109 EIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 154
D V LK+QGAC CPSS T+K GIE+ L +PE+ V +V
Sbjct: 149 GFDKGTVYLKMQGACAGCPSSSATLKNGIEQLLKHYVPEVTEVRAV 194
>gi|150015239|ref|YP_001307493.1| NifU domain-containing protein [Clostridium beijerinckii NCIMB
8052]
gi|149901704|gb|ABR32537.1| nitrogen-fixing NifU domain protein [Clostridium beijerinckii NCIMB
8052]
Length = 73
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E I LD+IRP L DGG+V L ++ + VV +K+QGACG+CP ++MT+KM IE++L E
Sbjct: 3 ELIMKSLDKIRPMLQRDGGDVELVDVSNDGVVSVKMQGACGNCPGAMMTIKMIIEQKLKE 62
Query: 144 KIPEIVAVESV 154
++P + V V
Sbjct: 63 EVPGVTEVIGV 73
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 8/71 (11%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITG-----PAAGVMTVRVAVTQK 218
+E I K L++IRP L GG +ELV + ++ +V V++ G P A +MT+++ + QK
Sbjct: 2 KELIMKSLDKIRPML-QRDGGDVELVDVSNDGVVSVKMQGACGNCPGA-MMTIKMIIEQK 59
Query: 219 LREKIPAIAAV 229
L+E++P + V
Sbjct: 60 LKEEVPGVTEV 70
>gi|339444625|ref|YP_004710629.1| thioredoxin-like protein [Eggerthella sp. YY7918]
gi|338904377|dbj|BAK44228.1| thioredoxin-like protein [Eggerthella sp. YY7918]
Length = 77
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
++ +VLD IRP L +DGG+V L ++D N VV ++LQGAC CP S MT+ G+ER L E+
Sbjct: 6 DVSAVLDLIRPSLQADGGDVRLVDVDENGVVSVELQGACKGCPMSQMTLANGVERILKER 65
Query: 145 IPEIVAV 151
+P + V
Sbjct: 66 VPGVTKV 72
>gi|320170179|gb|EFW47078.1| TO42 [Capsaspora owczarzaki ATCC 30864]
Length = 280
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LKL G+C +CPSS T+ G+ LM +
Sbjct: 177 IKELLDSRIRPMVQEDGGDIEFKSFENGVVKLKLIGSCSTCPSSKATLYDGVSNMLMHYV 236
Query: 146 PEIVAVESVADEETGLELNEENIEKV 171
PEI +E V DE E++ +EK+
Sbjct: 237 PEIEKIEQVEDEVD--EISNAQLEKL 260
>gi|313220324|emb|CBY31180.1| unnamed protein product [Oikopleura dioica]
Length = 95
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 87 IESVLD-EIRPYLISDGGNVAL--HEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
I+ +LD IRP ++ DGG++A + D V++L L GAC +CPSSV+T+K G+E +
Sbjct: 2 IKELLDTRIRPTVMEDGGDIAFVSFDPDTGVLQLSLIGACATCPSSVVTLKHGVENMMKF 61
Query: 144 KIPEIVAVESVADEETGLELNE-ENIEKVLEE 174
IPEI VE + E L E E I K L++
Sbjct: 62 YIPEITEVEQILTAEQDLSNKEFEKISKTLDK 93
>gi|452752312|ref|ZP_21952055.1| NifU-like domain protein [alpha proteobacterium JLT2015]
gi|451960388|gb|EMD82801.1| NifU-like domain protein [alpha proteobacterium JLT2015]
Length = 186
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 12/136 (8%)
Query: 30 TKSFFGER-VSLTRWRNPVCHSSCR---LLLIRKRGAARRNVIKAVATPDSAIELPLTAE 85
T F+GE VS+T+ + S+ + + LI A+ + A A PD+A ++ E
Sbjct: 52 TGVFYGEDFVSVTKDPSGGDWSALKPDVMSLIVDHFASGAPLFFAGA-PDTAPQIDENEE 110
Query: 86 N------IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 138
+ I +LD+ +RP + DGG++ H VV L++QGAC CPSS T+K GIE
Sbjct: 111 DADIRRQITELLDDRVRPAVAGDGGDIVFHGFKEGVVYLRMQGACAGCPSSTATLKNGIE 170
Query: 139 RRLMEKIPEIVAVESV 154
L +PE+ V +V
Sbjct: 171 NLLRYYVPEVEEVRAV 186
>gi|53136898|emb|CAG32778.1| hypothetical protein RCJMB04_35n21 [Gallus gallus]
Length = 232
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 150 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 209
Query: 146 PEIVAVE 152
PE+ VE
Sbjct: 210 PEVEGVE 216
>gi|224476033|ref|YP_002633639.1| hypothetical protein Sca_0540 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420640|emb|CAL27454.1| hypothetical protein with NifU domain [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 80
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 43/58 (74%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
+ + V++ +RP+L+ DGG+ L +++ +V+L+L GAC +CPSS +T+K GIER L+
Sbjct: 10 DQVAVVIERLRPFLLRDGGDCTLIDVEDGIVKLQLHGACNTCPSSTITLKAGIERALL 67
>gi|348528951|ref|XP_003451979.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Oreochromis niloticus]
Length = 271
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + VV+LKL G+C CPSS +T+K GI+ + I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIFKGFENGVVKLKLVGSCTGCPSSTVTLKNGIQNMMQFYI 232
Query: 146 PEIVAVESVADE 157
PE+ VE V DE
Sbjct: 233 PEVDKVEQVEDE 244
>gi|407781036|ref|ZP_11128256.1| NifU-like protein domain protein [Oceanibaculum indicum P24]
gi|407208462|gb|EKE78380.1| NifU-like protein domain protein [Oceanibaculum indicum P24]
Length = 183
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I+ +LD +RP + DGG++ + VV L +QGAC CPSS T+KMGIE L
Sbjct: 112 QTIKELLDTRVRPAVAQDGGDIVFKGFEDGVVYLHMQGACAGCPSSTATLKMGIENLLKH 171
Query: 144 KIPEIVAVES 153
IPE+ V +
Sbjct: 172 YIPEVAEVRA 181
>gi|347734811|ref|ZP_08867800.1| thioredoxin [Azospirillum amazonense Y2]
gi|346922129|gb|EGY02618.1| thioredoxin [Azospirillum amazonense Y2]
Length = 184
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H D VV L ++G+C CPSS T+K GIE L
Sbjct: 114 QIKELLDTRVRPAVAQDGGDITFHGFDKGVVYLTMKGSCAGCPSSTATLKAGIENMLRYY 173
Query: 145 IPEIVAVES 153
IPE+V V +
Sbjct: 174 IPEVVEVRA 182
>gi|85859635|ref|YP_461837.1| nifU-like domain-containing protein [Syntrophus aciditrophicus SB]
gi|85722726|gb|ABC77669.1| nifU-like domain protein [Syntrophus aciditrophicus SB]
Length = 73
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ ++ +D++RP L +DGG+V L ++ + VV+++L GAC C S MT+KMGIER L E
Sbjct: 3 DKVQEAIDQVRPGLQADGGDVELVDVTEDGVVKVRLVGACRGCAMSQMTLKMGIERFLKE 62
Query: 144 KIPEIVAVESV 154
+IPE+ V +V
Sbjct: 63 RIPEVKEVVAV 73
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAGV----MTVRVAVTQKL 219
++ +++ ++++RP L A GG +ELV + E +VKVR+ G G MT+++ + + L
Sbjct: 2 KDKVQEAIDQVRPGL-QADGGDVELVDVTEDGVVKVRLVGACRGCAMSQMTLKMGIERFL 60
Query: 220 REKIPAIAAV 229
+E+IP + V
Sbjct: 61 KERIPEVKEV 70
>gi|365858892|ref|ZP_09398791.1| NifU-like protein [Acetobacteraceae bacterium AT-5844]
gi|363713404|gb|EHL97021.1| NifU-like protein [Acetobacteraceae bacterium AT-5844]
Length = 188
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ +V+L++QGAC CPSS T+K G+E L
Sbjct: 117 QIKELLDTRVRPAVAGDGGDIVFRGFRDGIVKLRMQGACSGCPSSRATLKHGVENMLRHY 176
Query: 145 IPEIVAVESV 154
+PE++AVE V
Sbjct: 177 VPEVMAVEQV 186
>gi|414161510|ref|ZP_11417770.1| hypothetical protein HMPREF9310_02144 [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410876406|gb|EKS24317.1| hypothetical protein HMPREF9310_02144 [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 80
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 43/58 (74%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
+ + V++ +RP+L+ DGG+ L +++ +V+L+L GAC +CPSS +T+K GIER L+
Sbjct: 10 DQVAVVIERLRPFLLRDGGDCTLIDVEDGIVKLQLHGACNTCPSSTITLKAGIERALL 67
>gi|385809243|ref|YP_005845639.1| thioredoxin-like protein [Ignavibacterium album JCM 16511]
gi|383801291|gb|AFH48371.1| Thioredoxin-like protein [Ignavibacterium album JCM 16511]
Length = 75
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
++ L+ IRP+L +D G+V L E+ DG +V+++L GAC CP SVMT++ GIER LM +
Sbjct: 7 LQKALNSIRPFLQADNGDVELVEVSQDG-IVKVRLLGACEQCPLSVMTLRAGIERALMRE 65
Query: 145 IPEIVAVESV 154
+P I +E+V
Sbjct: 66 VPGIKRIEAV 75
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAA----GVMTVRVAVTQ 217
++E ++K L IRP+L A G +ELV + + IVKVR+ G VMT+R + +
Sbjct: 2 ISESLLQKALNSIRPFL-QADNGDVELVEVSQDGIVKVRLLGACEQCPLSVMTLRAGIER 60
Query: 218 KLREKIPAIAAVQ 230
L ++P I ++
Sbjct: 61 ALMREVPGIKRIE 73
>gi|212540194|ref|XP_002150252.1| NifU-related protein [Talaromyces marneffei ATCC 18224]
gi|210067551|gb|EEA21643.1| NifU-related protein [Talaromyces marneffei ATCC 18224]
Length = 321
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V LKL+GAC +C SS +T+K GIE LM I E+ V+
Sbjct: 223 IRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVQGVQQ 282
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V D+E + ++E K E++R
Sbjct: 283 VLDQEEEVSMHE--FAKFEEKLR 303
>gi|390443009|ref|ZP_10230808.1| Scaffold protein Nfu/NifU [Nitritalea halalkaliphila LW7]
gi|389667317|gb|EIM78740.1| Scaffold protein Nfu/NifU [Nitritalea halalkaliphila LW7]
Length = 131
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 13/105 (12%)
Query: 57 IRKRGAARRNVIKAVATPDSAIELPLTAEN-------IESVLDE-IRPYLISDGGNVALH 108
I++ AA + +K D PL EN I+ +LDE IRP + DGG + H
Sbjct: 29 IKQYLAAGKAPVKKTFDSD-----PLFDENDSESVKKIKGILDEYIRPAVEQDGGAIVFH 83
Query: 109 EIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
VV++ LQG+C CPSS +T+K GIE L +PE+ V++
Sbjct: 84 SFKDGVVKVLLQGSCSGCPSSTVTLKAGIENLLTRMLPEVKEVQA 128
>gi|332188730|ref|ZP_08390443.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. S17]
gi|332011236|gb|EGI53328.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. S17]
Length = 190
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVAT-PDSAIELPLTAENIESVLDEIRPYLISDGGNVAL 107
H S ++ L K+GAA V T D+ + + A+ E + +RP + +DGG++
Sbjct: 85 HFSAQMPLF-KQGAADFAVPAEEETFADNPEDADIVAQIRELIDTRVRPAVANDGGDIVY 143
Query: 108 HEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 154
D V LK+QGAC CPSS T+K GIE+ L +PE+ V +V
Sbjct: 144 RGFDKGKVYLKMQGACAGCPSSTATLKNGIEQLLRHYVPEVTEVRAV 190
>gi|326932642|ref|XP_003212423.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Meleagris gallopavo]
Length = 233
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 151 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 210
Query: 146 PEIVAVE 152
PE+ VE
Sbjct: 211 PEVEGVE 217
>gi|242802633|ref|XP_002484010.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
gi|218717355|gb|EED16776.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
Length = 321
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V LKL+GAC +C SS +T+K GIE LM I E+ V+
Sbjct: 223 IRPAIQEDGGDIEFRGFENGIVLLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVQGVQQ 282
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V D+E + ++E K E++R
Sbjct: 283 VLDQEEEVSMHE--FAKFEEKLR 303
>gi|347761181|ref|YP_004868742.1| nitrogen fixing thioredoxin-like protein [Gluconacetobacter xylinus
NBRC 3288]
gi|347580151|dbj|BAK84372.1| nitrogen fixing thioredoxin-like protein [Gluconacetobacter xylinus
NBRC 3288]
Length = 187
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I+ +LD +RP + DGG++ +VRL +QGAC CPSS T+K G+E L
Sbjct: 115 QQIKELLDTRVRPAVAGDGGDIVFRGYRDGIVRLTMQGACSGCPSSRATLKHGVENMLRH 174
Query: 144 KIPEIVAVESV 154
+PE+V+VE V
Sbjct: 175 YVPEVVSVEQV 185
>gi|326497811|dbj|BAJ94768.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521670|dbj|BAK00411.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 8/117 (6%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVAL- 107
+SS + L + AA + A+ DS I + + E +E+ IRP + DGG++
Sbjct: 153 YSSGQPLFLDSNTAAAMDT--AIHEDDSEI-VAMIKELLET---RIRPAVQDDGGDIEYR 206
Query: 108 -HEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLEL 163
E + +V+LK+QGAC CPSS +T+K GIE LM +PE+ VE D + EL
Sbjct: 207 GFEPETGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFDGDEEAEL 263
>gi|296087967|emb|CBI35250.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLD-EIRPYLISDGGNVAL 107
+SS + L + AA + A+ DS T I+ +L+ IRP + DGG++
Sbjct: 86 YSSGKPLFLDSNTAAAMDT--AIHEDDSE-----TVAMIKELLETRIRPAVQDDGGDIEY 138
Query: 108 HEID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEE 158
D +V+LK+QGAC CPSS +T+K GIE LM +PE+ VE D E
Sbjct: 139 RGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDAE 191
>gi|412990927|emb|CCO18299.1| nitrogen-fixing NifU domain protein [Bathycoccus prasinos]
Length = 294
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 15/159 (9%)
Query: 82 LTAENIESVLDEIRPYLISDGGN---VALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIE 138
LT E ++ L+EIRPY+I+DGGN VA+ E DG +V ++L GAC SC SS TMK G+E
Sbjct: 132 LTKETVDEALEEIRPYVINDGGNIEVVAVSEEDG-IVAVRLLGACASCASSQATMKGGVE 190
Query: 139 RRLMEKIPEIVAVESV-ADEETGL---ELNEENIEKVLEEIRPYLVGAAGGSLELVTID- 193
L + E E + + G EL +E + L+ I + G GG ++ + +D
Sbjct: 191 SVLRKTFGEKAFKEVINVSGDVGQAPPELTKEAVGAHLKSIEDRVKG-YGGVVKCLEVDG 249
Query: 194 -EPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQL 231
+ V + GP + A Q L++ P I L
Sbjct: 250 RKGNVVLGFRGPKP----LAAATAQSLQKTFPFIKTASL 284
>gi|332668404|ref|YP_004451192.1| nitrogen-fixing NifU domain-containing protein [Haliscomenobacter
hydrossis DSM 1100]
gi|332337218|gb|AEE54319.1| nitrogen-fixing NifU domain-containing protein [Haliscomenobacter
hydrossis DSM 1100]
Length = 84
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ L+E+RP+L DGGNV + ++ D VV++K G C +C S+MTM+ GIE+ + K+
Sbjct: 11 IDLALNEVRPHLAVDGGNVEVVDVTDEKVVKIKWLGNCQNCNMSIMTMRAGIEQAIRVKV 70
Query: 146 PEIVAVESV 154
PEI VE+V
Sbjct: 71 PEITGVEAV 79
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 168 IEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAG----VMTVRVAVTQKLREK 222
I+ L E+RP+L GG++E+V + DE +VK++ G +MT+R + Q +R K
Sbjct: 11 IDLALNEVRPHL-AVDGGNVEVVDVTDEKVVKIKWLGNCQNCNMSIMTMRAGIEQAIRVK 69
Query: 223 IPAIAAVQ 230
+P I V+
Sbjct: 70 VPEITGVE 77
>gi|225464130|ref|XP_002264979.1| PREDICTED: nifU-like protein 4, mitochondrial-like [Vitis vinifera]
Length = 271
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLD-EIRPYLISDGGNVAL 107
+SS + L + AA + A+ DS T I+ +L+ IRP + DGG++
Sbjct: 155 YSSGKPLFLDSNTAAAMDT--AIHEDDSE-----TVAMIKELLETRIRPAVQDDGGDIEY 207
Query: 108 HEID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEE 158
D +V+LK+QGAC CPSS +T+K GIE LM +PE+ VE D E
Sbjct: 208 RGFDPETGIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQELDAE 260
>gi|410031183|ref|ZP_11281013.1| thioredoxin-like protein [Marinilabilia sp. AK2]
Length = 193
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 83 TAENIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
T + I+ +LDE IRP + DGG + H +V++ LQG+C CPSS +T+K GI+ L
Sbjct: 119 TVKKIKGILDEYIRPAVEQDGGAIVFHSFHDGIVKVLLQGSCSGCPSSTVTLKAGIQNLL 178
Query: 142 MEKIPEIVAVES 153
IPE+ V++
Sbjct: 179 TRMIPEVKEVQA 190
>gi|67516331|ref|XP_658051.1| hypothetical protein AN0447.2 [Aspergillus nidulans FGSC A4]
gi|40747390|gb|EAA66546.1| hypothetical protein AN0447.2 [Aspergillus nidulans FGSC A4]
gi|259489306|tpe|CBF89467.1| TPA: NifU-related protein (AFU_orthologue; AFUA_1G04680)
[Aspergillus nidulans FGSC A4]
Length = 326
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V LKL+GAC +C SS +T++ GIE LM I E+ VE
Sbjct: 229 IRPAIQEDGGDIEFRGFENGIVMLKLRGACRTCDSSTVTLRNGIESMLMHYIEEVQGVEQ 288
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V DEE + + E K E++R
Sbjct: 289 VLDEEEEISMLE--FAKFEEKLR 309
>gi|46908571|ref|YP_014960.1| NifU family protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47092981|ref|ZP_00230761.1| NifU family protein [Listeria monocytogenes str. 4b H7858]
gi|217963499|ref|YP_002349177.1| hypothetical protein LMHCC_0201 [Listeria monocytogenes HCC23]
gi|226224948|ref|YP_002759055.1| NifU family protein [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254825479|ref|ZP_05230480.1| NifU family protein [Listeria monocytogenes FSL J1-194]
gi|254853597|ref|ZP_05242945.1| NifU family protein [Listeria monocytogenes FSL R2-503]
gi|254933176|ref|ZP_05266535.1| NifU family protein [Listeria monocytogenes HPB2262]
gi|254994154|ref|ZP_05276344.1| NifU family protein [Listeria monocytogenes FSL J2-064]
gi|255521513|ref|ZP_05388750.1| NifU family protein [Listeria monocytogenes FSL J1-175]
gi|290894179|ref|ZP_06557149.1| NifU family protein [Listeria monocytogenes FSL J2-071]
gi|300765271|ref|ZP_07075256.1| NifU family protein [Listeria monocytogenes FSL N1-017]
gi|386009117|ref|YP_005927395.1| NifU family protein [Listeria monocytogenes L99]
gi|386027728|ref|YP_005948504.1| putative Fe-S scaffold cluster NifU protein [Listeria monocytogenes
M7]
gi|386733083|ref|YP_006206579.1| NifU family protein [Listeria monocytogenes 07PF0776]
gi|404281955|ref|YP_006682853.1| NifU family protein [Listeria monocytogenes SLCC2755]
gi|404287768|ref|YP_006694354.1| NifU family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|404408776|ref|YP_006691491.1| NifU family protein [Listeria monocytogenes SLCC2376]
gi|405750741|ref|YP_006674207.1| NifU family protein [Listeria monocytogenes ATCC 19117]
gi|405753606|ref|YP_006677071.1| NifU family protein [Listeria monocytogenes SLCC2378]
gi|405756511|ref|YP_006679975.1| NifU family protein [Listeria monocytogenes SLCC2540]
gi|406705133|ref|YP_006755487.1| NifU family protein [Listeria monocytogenes L312]
gi|417318405|ref|ZP_12104988.1| NifU family protein [Listeria monocytogenes J1-220]
gi|422410666|ref|ZP_16487627.1| nitrogen fixation protein NifU [Listeria monocytogenes FSL F2-208]
gi|422810426|ref|ZP_16858837.1| thioredoxin-like protein [Listeria monocytogenes FSL J1-208]
gi|424715213|ref|YP_007015928.1| Putative nitrogen fixation protein YutI [Listeria monocytogenes
serotype 4b str. LL195]
gi|424824149|ref|ZP_18249162.1| Nitrogen-fixing NifU protein [Listeria monocytogenes str. Scott A]
gi|46881843|gb|AAT05137.1| NifU family protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47018635|gb|EAL09388.1| NifU family protein [Listeria monocytogenes str. 4b H7858]
gi|217332769|gb|ACK38563.1| conserved domain protein [Listeria monocytogenes HCC23]
gi|225877410|emb|CAS06124.1| Putative NifU family protein [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258606971|gb|EEW19579.1| NifU family protein [Listeria monocytogenes FSL R2-503]
gi|290556242|gb|EFD89786.1| NifU family protein [Listeria monocytogenes FSL J2-071]
gi|293584734|gb|EFF96766.1| NifU family protein [Listeria monocytogenes HPB2262]
gi|293594721|gb|EFG02482.1| NifU family protein [Listeria monocytogenes FSL J1-194]
gi|300514092|gb|EFK41154.1| NifU family protein [Listeria monocytogenes FSL N1-017]
gi|307571927|emb|CAR85106.1| NifU family protein [Listeria monocytogenes L99]
gi|313607074|gb|EFR83599.1| nitrogen fixation protein NifU [Listeria monocytogenes FSL F2-208]
gi|328471461|gb|EGF42355.1| NifU family protein [Listeria monocytogenes J1-220]
gi|332312829|gb|EGJ25924.1| Nitrogen-fixing NifU protein [Listeria monocytogenes str. Scott A]
gi|336024309|gb|AEH93446.1| putative Fe-S scaffold cluster NifU protein [Listeria monocytogenes
M7]
gi|378751316|gb|EHY61906.1| thioredoxin-like protein [Listeria monocytogenes FSL J1-208]
gi|384391841|gb|AFH80911.1| NifU family protein [Listeria monocytogenes 07PF0776]
gi|404219941|emb|CBY71305.1| NifU family protein [Listeria monocytogenes ATCC 19117]
gi|404222806|emb|CBY74169.1| NifU family protein [Listeria monocytogenes SLCC2378]
gi|404225711|emb|CBY77073.1| NifU family protein [Listeria monocytogenes SLCC2540]
gi|404228590|emb|CBY49995.1| NifU family protein [Listeria monocytogenes SLCC2755]
gi|404242925|emb|CBY64325.1| NifU family protein [Listeria monocytogenes SLCC2376]
gi|404246697|emb|CBY04922.1| NifU family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406362163|emb|CBY68436.1| NifU family protein [Listeria monocytogenes L312]
gi|424014397|emb|CCO64937.1| Putative nitrogen fixation protein YutI [Listeria monocytogenes
serotype 4b str. LL195]
Length = 78
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIER 139
++ ++ L + RP+L+ DGG+ L E+ DG VV++KL GAC +CPSS MT+KMGIE
Sbjct: 4 ISYAEVDKALKKFRPFLVRDGGDYELIEVTQDG-VVKIKLLGACETCPSSDMTLKMGIEL 62
Query: 140 RLMEKI 145
L EKI
Sbjct: 63 TLAEKI 68
>gi|452965143|gb|EME70170.1| HIRA-interacting protein 5 [Magnetospirillum sp. SO-1]
Length = 182
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ + +V L LQGAC CPSS T+K GIE L
Sbjct: 112 QIKELLDTRVRPAVAQDGGDIIFRAFEDGIVYLHLQGACSGCPSSSATLKHGIENMLKYY 171
Query: 145 IPEIVAVESV 154
+PE++AV++V
Sbjct: 172 VPEVMAVQAV 181
>gi|119357807|ref|YP_912451.1| NifU domain-containing protein [Chlorobium phaeobacteroides DSM
266]
gi|119355156|gb|ABL66027.1| nitrogen-fixing NifU domain protein [Chlorobium phaeobacteroides
DSM 266]
Length = 86
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ + + L+ +RPYL DGG+ L I + VV +KL GACGSCP S +T++ G+E+ + +
Sbjct: 16 DRVIAALETVRPYLQVDGGDCQLVGISKDMVVDVKLLGACGSCPMSTLTLRAGVEQAIKK 75
Query: 144 KIPEIVAVESV 154
IPEI VESV
Sbjct: 76 AIPEIARVESV 86
>gi|83313502|ref|YP_423766.1| HIRA-interacting protein 5 [Magnetospirillum magneticum AMB-1]
gi|82948343|dbj|BAE53207.1| HIRA-interacting protein 5 [Magnetospirillum magneticum AMB-1]
Length = 190
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ + +V L LQGAC CPSS T+K GIE L
Sbjct: 120 QIKELLDTRVRPAVAQDGGDIIFRAFEDGIVYLHLQGACSGCPSSSATLKHGIENMLKYY 179
Query: 145 IPEIVAVESV 154
+PE++AV++V
Sbjct: 180 VPEVMAVQAV 189
>gi|390558904|ref|ZP_10243292.1| putative Iron-sulphur cluster assembly protein,contains Rieske
(2Fe-2S) domain (fragment, part 2) [Nitrolancetus
hollandicus Lb]
gi|390174521|emb|CCF82583.1| putative Iron-sulphur cluster assembly protein,contains Rieske
(2Fe-2S) domain (fragment, part 2) [Nitrolancetus
hollandicus Lb]
Length = 235
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+ LD++RPYL S GG+V L ++ + R++LQG+C CPSS MT+K+ +E + P
Sbjct: 35 VAKALDQVRPYLQSHGGDVELLGLEDGIARVRLQGSCRGCPSSSMTLKLAVEDAIQRFAP 94
Query: 147 EIVAVES 153
EI +E+
Sbjct: 95 EIDGIEA 101
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 168 IEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGV----MTVRVAVTQKLREKI 223
+ K L+++RPYL + GG +EL+ +++ I +VR+ G G MT+++AV ++
Sbjct: 35 VAKALDQVRPYLQ-SHGGDVELLGLEDGIARVRLQGSCRGCPSSSMTLKLAVEDAIQRFA 93
Query: 224 PAIAAVQ 230
P I ++
Sbjct: 94 PEIDGIE 100
>gi|347800691|ref|NP_001006305.2| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Gallus
gallus]
Length = 252
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 170 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 229
Query: 146 PEIVAVE 152
PE+ VE
Sbjct: 230 PEVEGVE 236
>gi|46201919|ref|ZP_00054106.2| COG0694: Thioredoxin-like proteins and domains [Magnetospirillum
magnetotacticum MS-1]
Length = 182
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ + +V L LQGAC CPSS T+K GIE L
Sbjct: 112 QIKELLDTRVRPAVAQDGGDIIFRAFEDGIVYLHLQGACSGCPSSSATLKHGIENMLKYY 171
Query: 145 IPEIVAVESV 154
+PE++AV++V
Sbjct: 172 VPEVMAVQAV 181
>gi|195952454|ref|YP_002120744.1| nitrogen-fixing NifU domain-containing protein [Hydrogenobaculum
sp. Y04AAS1]
gi|452943291|ref|YP_007499456.1| nitrogen-fixing NifU domain protein [Hydrogenobaculum sp. HO]
gi|195932066|gb|ACG56766.1| nitrogen-fixing NifU domain protein [Hydrogenobaculum sp. Y04AAS1]
gi|452881709|gb|AGG14413.1| nitrogen-fixing NifU domain protein [Hydrogenobaculum sp. HO]
Length = 87
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 83 TAENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIERR 140
T E +E LDEIRP L DGG++ L I DG V+ ++L GAC C S +T+K G+ER
Sbjct: 5 TVEEVEEALDEIRPALRFDGGDIELVSIEEDGTVL-VRLMGACSGCGMSTLTLKAGVERA 63
Query: 141 LMEKIPEIVAVESV 154
L +K P+I V+ V
Sbjct: 64 LKQKFPDIKEVKDV 77
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAG----VMTVRVAVTQKLR 220
E +E+ L+EIRP L GG +ELV+I+E V VR+ G +G +T++ V + L+
Sbjct: 7 EEVEEALDEIRPALR-FDGGDIELVSIEEDGTVLVRLMGACSGCGMSTLTLKAGVERALK 65
Query: 221 EKIPAIAAVQ 230
+K P I V+
Sbjct: 66 QKFPDIKEVK 75
>gi|384109792|ref|ZP_10010655.1| Thioredoxin-like protein [Treponema sp. JC4]
gi|383868667|gb|EID84303.1| Thioredoxin-like protein [Treponema sp. JC4]
Length = 89
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
++ L+ RP L +DGG++ ID + V LKL GACGSCP ++MT+KMGIER L +
Sbjct: 10 VKEALEMFRPQLQADGGDMEYVGIDDDGKVHLKLTGACGSCPMALMTLKMGIERYLKDAC 69
Query: 146 PEIVAV 151
PE+ V
Sbjct: 70 PEVTEV 75
>gi|134300123|ref|YP_001113619.1| NifU domain-containing protein [Desulfotomaculum reducens MI-1]
gi|134052823|gb|ABO50794.1| nitrogen-fixing NifU domain protein [Desulfotomaculum reducens
MI-1]
Length = 74
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEID-GNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ L+++RP+L DGG+V + D VV++KL+GACGSCP ++ T+K GIER L +
Sbjct: 3 EQVKEALEQVRPFLQRDGGDVEFVDCDEKGVVKVKLRGACGSCPGALYTLKNGIERVLKQ 62
Query: 144 KIPEIVAVESV 154
++P + V V
Sbjct: 63 QVPGVTEVVRV 73
>gi|400536934|ref|ZP_10800468.1| hypothetical protein MCOL_V221161 [Mycobacterium colombiense CECT
3035]
gi|400329947|gb|EJO87446.1| hypothetical protein MCOL_V221161 [Mycobacterium colombiense CECT
3035]
Length = 307
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+ LD +RPYL S GG+V L E+ + VRL G+C SCPSS +T+++ ++ + P
Sbjct: 98 VSDALDRVRPYLGSHGGDVDLLEVADDTVRLAFTGSCKSCPSSAVTLELAVQDAVRAAAP 157
Query: 147 EIVAVESVADEET 159
EI ++E V E T
Sbjct: 158 EISSIEVVTAETT 170
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 168 IEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITG-----PAAGVMTVRVAVTQKLREK 222
+ L+ +RPYL G+ GG ++L+ + + V++ TG P++ V T+ +AV +R
Sbjct: 98 VSDALDRVRPYL-GSHGGDVDLLEVADDTVRLAFTGSCKSCPSSAV-TLELAVQDAVRAA 155
Query: 223 IPAIAAVQLL 232
P I++++++
Sbjct: 156 APEISSIEVV 165
>gi|296421235|ref|XP_002840171.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636384|emb|CAZ84362.1| unnamed protein product [Tuber melanosporum]
Length = 279
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + VV+LKL+GAC +C SS +T+K GIE LM I E+ +V+
Sbjct: 173 IRPAIQEDGGDIEYRGFENGVVKLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVQSVQQ 232
Query: 154 VADEETGLELNE-ENIEKVLEEIR 176
+ D E + + E E E+ L++++
Sbjct: 233 IMDPEEEVAVREFEKFEEKLKKVK 256
>gi|406859769|gb|EKD12832.1| NifU-like protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 312
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ +G +V LKL+GAC +C SS +T+K GIE LM I E+ V
Sbjct: 210 IRPAIQEDGGDIEFRGFEGGIVNLKLRGACRTCDSSTVTLKNGIEGMLMHYIEEVKGVNQ 269
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V D+E E++ K E++R
Sbjct: 270 VLDQEE--EVSALEFAKFEEKLR 290
>gi|397690836|ref|YP_006528090.1| nitrogen-fixing NifU domain protein [Melioribacter roseus P3M]
gi|395812328|gb|AFN75077.1| nitrogen-fixing NifU domain protein [Melioribacter roseus P3M]
Length = 78
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEID-GNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +E L+ IRPYL +DGG++ L ++ +V +KL GAC CP S MT++ G+ER L+
Sbjct: 7 EKVEQALENIRPYLRADGGDIELVQVTPEGIVEVKLTGACIECPMSQMTLRAGVERALIR 66
Query: 144 KIPEIVAVESV 154
++P I VE+V
Sbjct: 67 EVPGIRRVEAV 77
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 6/71 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTID-EPIVKVRITGPA----AGVMTVRVAVTQKL 219
+E +E+ LE IRPYL A GG +ELV + E IV+V++TG MT+R V + L
Sbjct: 6 KEKVEQALENIRPYL-RADGGDIELVQVTPEGIVEVKLTGACIECPMSQMTLRAGVERAL 64
Query: 220 REKIPAIAAVQ 230
++P I V+
Sbjct: 65 IREVPGIRRVE 75
>gi|324120927|ref|NP_001018093.2| NFU1 iron-sulfur cluster scaffold homolog [Danio rerio]
Length = 256
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + V+LKL G+C CPSS +T+K GI+ + I
Sbjct: 166 IKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSTVTLKNGIQNMMQFYI 225
Query: 146 PEIVAVESVADE--ETGLELNEENIEKVLEEI 175
PE+ VE V DE E +++ E +EK L+++
Sbjct: 226 PEVDNVEQVQDEVDEINMKVYTE-LEKKLQDV 256
>gi|41351250|gb|AAH65889.1| Zgc:110319 protein [Danio rerio]
Length = 255
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + V+LKL G+C CPSS +T+K GI+ + I
Sbjct: 165 IKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSTVTLKNGIQNMMQFYI 224
Query: 146 PEIVAVESVADE--ETGLELNEENIEKVLEEI 175
PE+ VE V DE E +++ E +EK L+++
Sbjct: 225 PEVDNVEQVQDEVDEINMKVYTE-LEKKLQDV 255
>gi|358055013|dbj|GAA98782.1| hypothetical protein E5Q_05470 [Mixia osmundae IAM 14324]
Length = 288
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 83 TAENIESVLD-EIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIER 139
T I+ +LD +RP + DGG++ D +V + L+G+C C SS +T+K GIER
Sbjct: 186 TVAMIKELLDTRVRPAIQEDGGDIEYRGFIEDTGIVNVSLKGSCRGCDSSTVTLKSGIER 245
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIR 176
L IPE+ AVE V EE + L+E EK E +R
Sbjct: 246 MLTHYIPEVKAVEQVLGEEEKVSLSE--FEKFEERLR 280
>gi|213624625|gb|AAI71359.1| Zgc:110319 [Danio rerio]
Length = 256
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + V+LKL G+C CPSS +T+K GI+ + I
Sbjct: 166 IKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSTVTLKNGIQNMMQFYI 225
Query: 146 PEIVAVESVADE--ETGLELNEENIEKVLEEI 175
PE+ VE V DE E +++ E +EK L+++
Sbjct: 226 PEVDNVEQVQDEVDEINMKVYTE-LEKKLQDV 256
>gi|164657977|ref|XP_001730114.1| hypothetical protein MGL_2496 [Malassezia globosa CBS 7966]
gi|159104009|gb|EDP42900.1| hypothetical protein MGL_2496 [Malassezia globosa CBS 7966]
Length = 276
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 87 IESVLD-EIRPYLISDGGNV---ALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
I+ +LD +RP + DGG++ E +VR+KL+G+C C SS +T+K GIER LM
Sbjct: 173 IKELLDTRVRPAIQEDGGDLEYRGFGEDSDGIVRVKLKGSCRGCDSSTVTLKSGIERMLM 232
Query: 143 EKIPEIVAVESVADEETGLELNE 165
+PE+ VE V D E + ++E
Sbjct: 233 HYVPEVQGVEQVLDPEEQVAMDE 255
>gi|453331572|dbj|GAC86486.1| NifU protein [Gluconobacter thailandicus NBRC 3255]
Length = 205
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 71 VATPDSAIELPLTAEN------IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGAC 123
+A D A++ + E+ I +LD +RP + DGG++A VV L +QGAC
Sbjct: 113 LAGDDEALKYDIAPEDADVVVRIRDLLDTRVRPAVAGDGGDIAFRGYKDGVVYLTMQGAC 172
Query: 124 GSCPSSVMTMKMGIERRLMEKIPEIVAVESVAD 156
CPSS T+K G+E L +PE+ +VE V D
Sbjct: 173 SGCPSSRATLKHGVENMLRHYVPEVQSVEQVED 205
>gi|62202252|gb|AAH92870.1| Zgc:110319 [Danio rerio]
gi|182890178|gb|AAI64833.1| Zgc:110319 [Danio rerio]
Length = 256
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + V+LKL G+C CPSS +T+K GI+ + I
Sbjct: 166 IKELLDTRIRPTVQEDGGDVIFKGFEDGTVKLKLVGSCTGCPSSTVTLKNGIQNMMQFYI 225
Query: 146 PEIVAVESVADE--ETGLELNEENIEKVLEEI 175
PE+ VE V DE E +++ E +EK L+++
Sbjct: 226 PEVDNVEQVQDEVDEINMKVYTE-LEKKLQDV 256
>gi|440747535|ref|ZP_20926792.1| nifU domain protein [Mariniradius saccharolyticus AK6]
gi|436484005|gb|ELP40025.1| nifU domain protein [Mariniradius saccharolyticus AK6]
Length = 181
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 83 TAENIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
T + I+ +LDE IRP + DGG + H +V++ LQG+C CPSS +T+K GI+ L
Sbjct: 107 TVKKIKGILDEYIRPAVEQDGGAIVFHSFHDGIVKVLLQGSCSGCPSSTVTLKAGIQNLL 166
Query: 142 MEKIPEIVAVES 153
+PE+ V++
Sbjct: 167 TRMVPEVSEVQA 178
>gi|119189821|ref|XP_001245517.1| hypothetical protein CIMG_04958 [Coccidioides immitis RS]
gi|392868417|gb|EAS34199.2| HIRA-interacting protein 5 [Coccidioides immitis RS]
Length = 325
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 94 IRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
IRP + DGG++ DGNV+ LKL+GAC +C SS +T+K GIE LM I E+ +V
Sbjct: 223 IRPAIQEDGGDIEFRGFKDGNVM-LKLRGACRTCDSSTVTLKNGIESMLMHYIEEVKSVT 281
Query: 153 SVADEETGLELNEENIEKVLEEIR 176
V DEE + L E E+ E++R
Sbjct: 282 QVIDEEEEVALKE--FERFEEKLR 303
>gi|303322791|ref|XP_003071387.1| NifU-like domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240111089|gb|EER29242.1| NifU-like domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 325
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 94 IRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
IRP + DGG++ DGNV+ LKL+GAC +C SS +T+K GIE LM I E+ +V
Sbjct: 223 IRPAIQEDGGDIEFRGFKDGNVM-LKLRGACRTCDSSTVTLKNGIESMLMHYIEEVKSVT 281
Query: 153 SVADEETGLELNEENIEKVLEEIR 176
V DEE + L E E+ E++R
Sbjct: 282 QVIDEEEEVALKE--FERFEEKLR 303
>gi|374293447|ref|YP_005040482.1| putative iron-sulfur cluster scaffold, NifU-like [Azospirillum
lipoferum 4B]
gi|357425386|emb|CBS88273.1| putative iron-sulfur cluster scaffold, NifU-like [Azospirillum
lipoferum 4B]
Length = 190
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E I+ +LD +RP + DGG++ + VV L ++GAC CPSS T+K GIE L
Sbjct: 119 EQIKELLDTRVRPSVAQDGGDITFQGFEKGVVYLAMKGACSGCPSSTATLKHGIENMLRH 178
Query: 144 KIPEIVAVESV 154
IPE+V V +V
Sbjct: 179 YIPEVVEVRAV 189
>gi|289578725|ref|YP_003477352.1| nitrogen-fixing NifU domain-containing protein [Thermoanaerobacter
italicus Ab9]
gi|289528438|gb|ADD02790.1| nitrogen-fixing NifU domain protein [Thermoanaerobacter italicus
Ab9]
Length = 73
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ +E VL+ +RP L +DGG+V L ++ + +V+++L GACG CP + +T+K GIER + E
Sbjct: 3 KRVEEVLELLRPSLQADGGDVELIDVTEDGIVKIRLTGACGGCPFATLTLKEGIERAIKE 62
Query: 144 KIPEIVAVESV 154
+IPE+ V +V
Sbjct: 63 EIPEVKEVIAV 73
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAG----VMTVRVAVTQKLR 220
+ +E+VLE +RP L A GG +EL+ + E IVK+R+TG G +T++ + + ++
Sbjct: 3 KRVEEVLELLRPSL-QADGGDVELIDVTEDGIVKIRLTGACGGCPFATLTLKEGIERAIK 61
Query: 221 EKIPAIAAV 229
E+IP + V
Sbjct: 62 EEIPEVKEV 70
>gi|189500939|ref|YP_001960409.1| nitrogen-fixing NifU domain-containing protein [Chlorobium
phaeobacteroides BS1]
gi|189496380|gb|ACE04928.1| nitrogen-fixing NifU domain protein [Chlorobium phaeobacteroides
BS1]
Length = 86
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 91 LDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV 149
L+E+RPYL +DGG+ L I + +V +KL GACGSCP S +T++ G+E+ + + +PEI
Sbjct: 22 LEEVRPYLQADGGDCQLVGITKDMLVDVKLLGACGSCPMSTLTLRAGVEQAIKKAVPEIA 81
Query: 150 AVESV 154
VE+V
Sbjct: 82 RVEAV 86
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKLR 220
+ + K LEE+RPYL A GG +LV I + +V V++ G +T+R V Q ++
Sbjct: 16 DRVIKALEEVRPYL-QADGGDCQLVGITKDMLVDVKLLGACGSCPMSTLTLRAGVEQAIK 74
Query: 221 EKIPAIAAVQ 230
+ +P IA V+
Sbjct: 75 KAVPEIARVE 84
>gi|320032859|gb|EFW14809.1| NifU family protein [Coccidioides posadasii str. Silveira]
Length = 325
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 94 IRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
IRP + DGG++ DGNV+ LKL+GAC +C SS +T+K GIE LM I E+ +V
Sbjct: 223 IRPAIQEDGGDIEFRGFKDGNVM-LKLRGACRTCDSSTVTLKNGIESMLMHYIEEVKSVT 281
Query: 153 SVADEETGLELNEENIEKVLEEIR 176
V DEE + L E E+ E++R
Sbjct: 282 QVIDEEEEVALKE--FERFEEKLR 303
>gi|308492754|ref|XP_003108567.1| CRE-LPD-8 protein [Caenorhabditis remanei]
gi|308248307|gb|EFO92259.1| CRE-LPD-8 protein [Caenorhabditis remanei]
Length = 223
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Query: 33 FFGER-VSLTRWRNPVCHSSCR---LLLIRKRGAARRNVIKAVATPD--SAIELPLTAEN 86
FFGE V++T+ V + R I + VI VA D + +E
Sbjct: 72 FFGEDFVTVTKADEHVDWALLRPEIFSTIADHLQTGKPVINEVAATDGEAEVEDNEVVMM 131
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +L+ IRP + DGG++ D VV+LK+QG+C CPSS +T+K GIE L +
Sbjct: 132 IKEILETRIRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLTFYV 191
Query: 146 PEIVAVESVADEETGL 161
PE+ V V DE L
Sbjct: 192 PEVKEVIEVKDESDDL 207
>gi|344942701|ref|ZP_08781988.1| Fe-S cluster assembly protein NifU [Methylobacter tundripaludum
SV96]
gi|344259988|gb|EGW20260.1| Fe-S cluster assembly protein NifU [Methylobacter tundripaludum
SV96]
Length = 301
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 48 CHSSCRLLL---IRKRGAARRNVIKAVATPD--SAIELPLTA----ENIESVLDEIRPYL 98
CH +L + ++G VA P+ +A++ P+T + IE VL+ +RP L
Sbjct: 175 CHEDIEAILEKVLAEKGEKFDPTAAPVAAPEKVAAVKAPMTNLQRIKKIEEVLESLRPAL 234
Query: 99 ISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
++DGG+V L E+ GN + + GAC C + MT+ GI++RLME + E + V
Sbjct: 235 MADGGDVELVEVIGNTAYVNMTGACNGCQMAAMTIA-GIQQRLMEVMGEFIKV 286
>gi|51473845|ref|YP_067602.1| hypothetical protein RT0659 [Rickettsia typhi str. Wilmington]
gi|383752621|ref|YP_005427721.1| hypothetical protein RTTH1527_03170 [Rickettsia typhi str. TH1527]
gi|383843457|ref|YP_005423960.1| hypothetical protein RTB9991CWPP_03175 [Rickettsia typhi str.
B9991CWPP]
gi|51460157|gb|AAU04120.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
gi|380759264|gb|AFE54499.1| hypothetical protein RTTH1527_03170 [Rickettsia typhi str. TH1527]
gi|380760104|gb|AFE55338.1| hypothetical protein RTB9991CWPP_03175 [Rickettsia typhi str.
B9991CWPP]
Length = 190
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
IE++ +RP++ DGG++ + VV+L L+GAC CPSS +T+K GIE L IP
Sbjct: 118 IETIETRVRPFVTQDGGDIIYKGFESGVVKLALRGACLGCPSSTITLKNGIESMLRHFIP 177
Query: 147 EIVAVESVADE 157
E+ V++V ++
Sbjct: 178 EVQEVQAVEED 188
>gi|312141489|ref|YP_004008825.1| fe-s cluster assembly protein nifu-like [Rhodococcus equi 103S]
gi|311890828|emb|CBH50147.1| putative Fe-S cluster assembly protein NifU-like [Rhodococcus equi
103S]
Length = 311
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
+ + LD +RPYL S GG+V L ++ D VVRL+L G+C CPSS +T+++ +E +
Sbjct: 99 VRTALDSVRPYLGSHGGDVELVDVTDDGVVRLRLLGSCHGCPSSAVTLQLAVEGAVQAAA 158
Query: 146 PEIVAVE-SVADEETGLELNEENIEKVLEEIR 176
PE A+E D ET ++ ++ +R
Sbjct: 159 PETTAIEVETEDRETAPTAGVFTVDSLMSHVR 190
>gi|325677298|ref|ZP_08156964.1| Rieske family iron-sulfur cluster-binding protein [Rhodococcus equi
ATCC 33707]
gi|325551995|gb|EGD21691.1| Rieske family iron-sulfur cluster-binding protein [Rhodococcus equi
ATCC 33707]
Length = 311
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
+ + LD +RPYL S GG+V L ++ D VVRL+L G+C CPSS +T+++ +E +
Sbjct: 99 VRTALDSVRPYLGSHGGDVELVDVTDDGVVRLRLLGSCHGCPSSAVTLQLAVEGAVQAAA 158
Query: 146 PEIVAVE-SVADEETGLELNEENIEKVLEEIR 176
PE A+E D ET ++ ++ +R
Sbjct: 159 PETTAIEVETEDRETAPTAGVFTVDSLMSHVR 190
>gi|154254042|ref|YP_001414866.1| scaffold protein Nfu/NifU [Parvibaculum lavamentivorans DS-1]
gi|154157992|gb|ABS65209.1| Scaffold protein Nfu/NifU [Parvibaculum lavamentivorans DS-1]
Length = 201
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ + VV L +QGAC CPSS +T+K G+E L
Sbjct: 132 QIKEILDTRVRPAVAQDGGDITFQGYEEGVVFLNMQGACAGCPSSTVTLKRGVENMLKHY 191
Query: 145 IPEIVAVESV 154
IPEIV V V
Sbjct: 192 IPEIVEVRQV 201
>gi|197106639|ref|YP_002132016.1| thioredoxin-like domain-containing protein [Phenylobacterium
zucineum HLK1]
gi|196480059|gb|ACG79587.1| thioredoxin-like domain protein [Phenylobacterium zucineum HLK1]
Length = 233
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 94 IRPYLISDGGNVAL--HEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
+RP + DGG+V E D V+ +++QGACG CPSS +T+K GIE+ + +PE++ V
Sbjct: 122 VRPGVARDGGDVLFDRFEPDTGVLWIRMQGACGGCPSSRLTLKAGIEQIVRRYVPEVLRV 181
Query: 152 ESVADEETGLELNEENIEKVLEEIRPYLVGAAGG 185
E DE E +++ E +R GA GG
Sbjct: 182 EEATDEAEVQEGAASRLKRWAERLR---GGAPGG 212
>gi|357032014|ref|ZP_09093954.1| NifU protein [Gluconobacter morbifer G707]
gi|356414241|gb|EHH67888.1| NifU protein [Gluconobacter morbifer G707]
Length = 195
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
+RP + DGG++A VV L +QGAC CPSS T+K G+E L +PE+V+VE
Sbjct: 133 VRPAVAGDGGDIAFRGYKEGVVYLAMQGACSGCPSSRATLKHGVENMLRHYVPEVVSVEQ 192
Query: 154 VAD 156
V D
Sbjct: 193 VED 195
>gi|417316184|ref|ZP_12102836.1| NifU family protein [Listeria monocytogenes J1816]
gi|328465264|gb|EGF36521.1| NifU family protein [Listeria monocytogenes J1816]
Length = 82
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
++ L + RP+L+ DGG+ L E+ DG VV++KL GAC +CPSS MT+KMGIE L E
Sbjct: 8 EVDKALKKFRPFLVRDGGDYELIEVTQDG-VVKIKLLGACETCPSSDMTLKMGIELTLAE 66
Query: 144 KI 145
K+
Sbjct: 67 KL 68
>gi|302389972|ref|YP_003825793.1| nitrogen-fixing NifU domain-containing protein
[Thermosediminibacter oceani DSM 16646]
gi|302200600|gb|ADL08170.1| nitrogen-fixing NifU domain protein [Thermosediminibacter oceani
DSM 16646]
Length = 74
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ VL++IRP L +DGG+V L ++D +V+++L G+C CP S +T+K GIE+ L
Sbjct: 3 EKVQEVLNKIRPSLQADGGDVELVDVDEEKGIVKVRLTGSCFGCPFSTLTLKNGIEQVLK 62
Query: 143 EKIPEIVAVESV 154
E++P + V+SV
Sbjct: 63 EEVPGVKEVQSV 74
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP--IVKVRITGPAAG----VMTVRVAVTQK 218
+E +++VL +IRP L A GG +ELV +DE IVKVR+TG G +T++ + Q
Sbjct: 2 KEKVQEVLNKIRPSL-QADGGDVELVDVDEEKGIVKVRLTGSCFGCPFSTLTLKNGIEQV 60
Query: 219 LREKIPAIAAVQ 230
L+E++P + VQ
Sbjct: 61 LKEEVPGVKEVQ 72
>gi|103487552|ref|YP_617113.1| nitrogen-fixing NifU-like protein [Sphingopyxis alaskensis RB2256]
gi|98977629|gb|ABF53780.1| nitrogen-fixing NifU-like protein [Sphingopyxis alaskensis RB2256]
Length = 190
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 81 PLTAENIESVLD----EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMG 136
P A+ IE + + +RP + +DGG++ D V LK+QGAC CPSS T+K G
Sbjct: 113 PADADIIEQIKELIETRVRPAVANDGGDIVYRGFDKGNVYLKMQGACAGCPSSTATLKNG 172
Query: 137 IERRLMEKIPEIVAVESV 154
IE L +PE+ AV +V
Sbjct: 173 IESLLKHYVPEVTAVHAV 190
>gi|21674600|ref|NP_662665.1| NifU protein [Chlorobium tepidum TLS]
gi|21647799|gb|AAM73007.1| nifU protein, putative [Chlorobium tepidum TLS]
Length = 83
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ + S L+ +RPYL DGG+ L I + VV +KL GACGSCP S +T++ G+E+ + +
Sbjct: 13 DKVISALETVRPYLQVDGGDCQLVGITKDMVVDVKLLGACGSCPMSTLTLRAGVEQAIKK 72
Query: 144 KIPEIVAVESV 154
PEIV VESV
Sbjct: 73 ANPEIVRVESV 83
>gi|406661096|ref|ZP_11069220.1| Fe-S cluster assembly protein NifU [Cecembia lonarensis LW9]
gi|405555038|gb|EKB50088.1| Fe-S cluster assembly protein NifU [Cecembia lonarensis LW9]
Length = 193
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 83 TAENIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
T + I+ +LDE IRP + DGG + H VV++ LQG+C CPSS +T+K GI+ L
Sbjct: 119 TVKKIKGILDEYIRPAVEQDGGAIVFHSFQDGVVKVLLQGSCSGCPSSTVTLKAGIQNLL 178
Query: 142 MEKIPEIVAVES 153
+PE+ V++
Sbjct: 179 TRMLPEVKEVQA 190
>gi|15604511|ref|NP_221029.1| hypothetical protein RP667 [Rickettsia prowazekii str. Madrid E]
gi|383486656|ref|YP_005404336.1| hypothetical protein MA5_00270 [Rickettsia prowazekii str. GvV257]
gi|383488064|ref|YP_005405743.1| hypothetical protein M9W_03200 [Rickettsia prowazekii str.
Chernikova]
gi|383488909|ref|YP_005406587.1| hypothetical protein M9Y_03205 [Rickettsia prowazekii str.
Katsinyian]
gi|383489749|ref|YP_005407426.1| hypothetical protein MA3_03240 [Rickettsia prowazekii str. Dachau]
gi|383499889|ref|YP_005413250.1| hypothetical protein MA1_03195 [Rickettsia prowazekii str.
BuV67-CWPP]
gi|383500726|ref|YP_005414086.1| hypothetical protein MA7_03195 [Rickettsia prowazekii str. RpGvF24]
gi|386082530|ref|YP_005999108.1| NifU-like protein [Rickettsia prowazekii str. Rp22]
gi|3861205|emb|CAA15105.1| unknown [Rickettsia prowazekii str. Madrid E]
gi|292572295|gb|ADE30210.1| NifU-like protein [Rickettsia prowazekii str. Rp22]
gi|380757021|gb|AFE52258.1| hypothetical protein MA5_00270 [Rickettsia prowazekii str. GvV257]
gi|380758423|gb|AFE53659.1| hypothetical protein MA7_03195 [Rickettsia prowazekii str. RpGvF24]
gi|380760943|gb|AFE49465.1| hypothetical protein M9W_03200 [Rickettsia prowazekii str.
Chernikova]
gi|380761788|gb|AFE50309.1| hypothetical protein M9Y_03205 [Rickettsia prowazekii str.
Katsinyian]
gi|380762635|gb|AFE51155.1| hypothetical protein MA1_03195 [Rickettsia prowazekii str.
BuV67-CWPP]
gi|380763472|gb|AFE51991.1| hypothetical protein MA3_03240 [Rickettsia prowazekii str. Dachau]
Length = 190
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
IE++ +RP++ DGG++ + VV+L L+GAC CPSS +T+K GIE L IP
Sbjct: 118 IETIETRVRPFVTQDGGDIIYKGFESGVVKLALRGACLGCPSSTITLKNGIESMLKHFIP 177
Query: 147 EIVAVESVADE 157
E+ V++V ++
Sbjct: 178 EVQEVKAVEED 188
>gi|381183347|ref|ZP_09892089.1| hypothetical protein KKC_08617 [Listeriaceae bacterium TTU M1-001]
gi|380316749|gb|EIA20126.1| hypothetical protein KKC_08617 [Listeriaceae bacterium TTU M1-001]
Length = 112
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIER 139
++ ++++ L + RPYL+ DGG+ L ++ DG +V+++L GAC +CPSS MT+KMGIE
Sbjct: 4 ISFDSVDKALQKFRPYLLRDGGDYELIDVTQDG-IVKIRLLGACVTCPSSDMTLKMGIEL 62
Query: 140 RLMEKI 145
L EKI
Sbjct: 63 TLSEKI 68
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 162 ELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPA----AGVMTVRVAVT 216
E++ ++++K L++ RPYL+ GG EL+ + + IVK+R+ G + MT+++ +
Sbjct: 3 EISFDSVDKALQKFRPYLL-RDGGDYELIDVTQDGIVKIRLLGACVTCPSSDMTLKMGIE 61
Query: 217 QKLREKIPAIAAV 229
L EKI V
Sbjct: 62 LTLSEKIFGFKEV 74
>gi|315283493|ref|ZP_07871670.1| nitrogen fixation protein NifU [Listeria marthii FSL S4-120]
gi|313612862|gb|EFR86827.1| nitrogen fixation protein NifU [Listeria marthii FSL S4-120]
Length = 78
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIER 139
++ ++ L + RP+L+ DGG+ L E+ DG +V++KL GAC +CPSS MT+KMGIE
Sbjct: 4 ISYAEVDKALKKFRPFLVRDGGDYELVEVTQDG-IVKIKLLGACETCPSSDMTLKMGIEL 62
Query: 140 RLMEKI 145
L EKI
Sbjct: 63 TLAEKI 68
>gi|16804435|ref|NP_465920.1| hypothetical protein lmo2397 [Listeria monocytogenes EGD-e]
gi|47095874|ref|ZP_00233478.1| NifU family protein [Listeria monocytogenes str. 1/2a F6854]
gi|254827975|ref|ZP_05232662.1| NifU family protein [Listeria monocytogenes FSL N3-165]
gi|254913294|ref|ZP_05263306.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937675|ref|ZP_05269372.1| NifU family protein [Listeria monocytogenes F6900]
gi|284802839|ref|YP_003414704.1| hypothetical protein LM5578_2596 [Listeria monocytogenes 08-5578]
gi|284995980|ref|YP_003417748.1| hypothetical protein LM5923_2545 [Listeria monocytogenes 08-5923]
gi|386044699|ref|YP_005963504.1| thioredoxin-like protein [Listeria monocytogenes 10403S]
gi|386048059|ref|YP_005966391.1| NifU family protein [Listeria monocytogenes J0161]
gi|386051368|ref|YP_005969359.1| NifU family protein [Listeria monocytogenes FSL R2-561]
gi|386054588|ref|YP_005972146.1| NifU family protein [Listeria monocytogenes Finland 1998]
gi|404284890|ref|YP_006685787.1| NifU family protein [Listeria monocytogenes SLCC2372]
gi|404411639|ref|YP_006697227.1| NifU family protein [Listeria monocytogenes SLCC5850]
gi|404414418|ref|YP_006700005.1| NifU family protein [Listeria monocytogenes SLCC7179]
gi|405759446|ref|YP_006688722.1| NifU family protein [Listeria monocytogenes SLCC2479]
gi|16411885|emb|CAD00475.1| lmo2397 [Listeria monocytogenes EGD-e]
gi|47015751|gb|EAL06680.1| NifU family protein [Listeria monocytogenes str. 1/2a F6854]
gi|258600358|gb|EEW13683.1| NifU family protein [Listeria monocytogenes FSL N3-165]
gi|258610275|gb|EEW22883.1| NifU family protein [Listeria monocytogenes F6900]
gi|284058401|gb|ADB69342.1| hypothetical protein LM5578_2596 [Listeria monocytogenes 08-5578]
gi|284061447|gb|ADB72386.1| hypothetical protein LM5923_2545 [Listeria monocytogenes 08-5923]
gi|293591295|gb|EFF99629.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|345535050|gb|AEO04491.1| NifU family protein [Listeria monocytogenes J0161]
gi|345537933|gb|AEO07373.1| thioredoxin-like protein [Listeria monocytogenes 10403S]
gi|346425214|gb|AEO26739.1| NifU family protein [Listeria monocytogenes FSL R2-561]
gi|346647239|gb|AEO39864.1| NifU family protein [Listeria monocytogenes Finland 1998]
gi|404231465|emb|CBY52869.1| NifU family protein [Listeria monocytogenes SLCC5850]
gi|404234392|emb|CBY55795.1| NifU family protein [Listeria monocytogenes SLCC2372]
gi|404237328|emb|CBY58730.1| NifU family protein [Listeria monocytogenes SLCC2479]
gi|404240117|emb|CBY61518.1| NifU family protein [Listeria monocytogenes SLCC7179]
gi|441472175|emb|CCQ21930.1| Putative nitrogen fixation protein YutI [Listeria monocytogenes]
gi|441475313|emb|CCQ25067.1| Putative nitrogen fixation protein YutI [Listeria monocytogenes
N53-1]
Length = 78
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIER 139
++ ++ L + RP+L+ DGG+ L E+ DG +V++KL GAC +CPSS MT+KMGIE
Sbjct: 4 ISYAEVDKALKKFRPFLVRDGGDYELIEVTQDG-IVKIKLLGACETCPSSDMTLKMGIEL 62
Query: 140 RLMEKI 145
L EKI
Sbjct: 63 TLAEKI 68
>gi|16801558|ref|NP_471826.1| hypothetical protein lin2496 [Listeria innocua Clip11262]
gi|422413907|ref|ZP_16490866.1| YutI [Listeria innocua FSL S4-378]
gi|422416878|ref|ZP_16493835.1| YutI [Listeria innocua FSL J1-023]
gi|423098538|ref|ZP_17086283.1| NifU-like protein [Listeria innocua ATCC 33091]
gi|16415018|emb|CAC97723.1| lin2496 [Listeria innocua Clip11262]
gi|313617409|gb|EFR89807.1| YutI [Listeria innocua FSL S4-378]
gi|313622571|gb|EFR92972.1| YutI [Listeria innocua FSL J1-023]
gi|370794996|gb|EHN62733.1| NifU-like protein [Listeria innocua ATCC 33091]
Length = 78
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIER 139
++ ++ L + RP+L+ DGG+ L E+ DG +V++KL GAC +CPSS MT+KMGIE
Sbjct: 4 ISYAEVDKALKKFRPFLVRDGGDYELVEVTPDG-IVKIKLLGACETCPSSDMTLKMGIEL 62
Query: 140 RLMEKI 145
L EKI
Sbjct: 63 TLAEKI 68
>gi|413948796|gb|AFW81445.1| hypothetical protein ZEAMMB73_536097 [Zea mays]
Length = 268
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALH 108
+SS + L + AA + A+ DS I + + E +E+ IRP + DGG++
Sbjct: 156 YSSGQPLFLDSNAAASMDT--AIHEDDSEI-VAMIKELLET---RIRPAVQDDGGDIEYR 209
Query: 109 EID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVAD 156
D V+LK+QGAC CPSS +T+K GIE LM +PE+ VE D
Sbjct: 210 GFDPETGTVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFD 259
>gi|296114423|ref|ZP_06833077.1| Scaffold protein Nfu/NifU [Gluconacetobacter hansenii ATCC 23769]
gi|295979184|gb|EFG85908.1| Scaffold protein Nfu/NifU [Gluconacetobacter hansenii ATCC 23769]
Length = 187
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I+ +LD +RP + DGG++ +VRL +QGAC CPSS T+K G+E L
Sbjct: 115 KQIKELLDTRVRPAVAGDGGDIVFRGYRDGIVRLTMQGACSGCPSSRATLKHGVENMLRH 174
Query: 144 KIPEIVAVESV 154
+PE+V+VE V
Sbjct: 175 YVPEVVSVEQV 185
>gi|239047306|ref|NP_001131382.2| uncharacterized protein LOC100192708 [Zea mays]
gi|238908578|gb|ACF79773.2| unknown [Zea mays]
Length = 268
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALH 108
+SS + L + AA + A+ DS I + + E +E+ IRP + DGG++
Sbjct: 156 YSSGQPLFLDSNAAASMDT--AIHEDDSEI-VAMIKELLET---RIRPAVQDDGGDIEYR 209
Query: 109 EID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVAD 156
D V+LK+QGAC CPSS +T+K GIE LM +PE+ VE D
Sbjct: 210 GFDPETGTVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGVEQEFD 259
>gi|239610759|gb|EEQ87746.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis ER-3]
Length = 318
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V LKL+GAC +C SS +T+K GIE LM I E+ V
Sbjct: 220 IRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVKEVNH 279
Query: 154 VADEETGLELNE-ENIEKVLEEIRPYLVGAAGGSLEL 189
V D+E + L+E E+ L + + AA SL++
Sbjct: 280 VLDQEEEVGLHEFAKFEEKLRQQKGPQATAASSSLDV 316
>gi|329114732|ref|ZP_08243489.1| Scaffold Protein Nfu/NifU [Acetobacter pomorum DM001]
gi|326695863|gb|EGE47547.1| Scaffold Protein Nfu/NifU [Acetobacter pomorum DM001]
Length = 186
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ +VRL +QGAC CPSS T+K G+E L
Sbjct: 116 QIKELLDTRVRPAVAGDGGDIVFRGYRNGIVRLTMQGACSGCPSSRATLKHGVENMLRHY 175
Query: 145 IPEIVAVESV 154
+PE+V+VE V
Sbjct: 176 VPEVVSVEQV 185
>gi|253828131|ref|ZP_04871016.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313142706|ref|ZP_07804899.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253511537|gb|EES90196.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313131737|gb|EFR49354.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 81
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI- 145
+E V+D++RP LI+DGGNV L +I+ V ++L+GAC CPSS T+K GIE L +I
Sbjct: 13 VEIVIDKVRPMLINDGGNVTLLKIENGKVYVRLEGACKGCPSSSKTLKFGIESALKNEIH 72
Query: 146 PEI 148
P+I
Sbjct: 73 PDI 75
>gi|189345962|ref|YP_001942491.1| nitrogen-fixing NifU domain-containing protein [Chlorobium limicola
DSM 245]
gi|189340109|gb|ACD89512.1| nitrogen-fixing NifU domain protein [Chlorobium limicola DSM 245]
Length = 86
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ + + L+ +RPYL DGG+ L I + VV +KL GACGSCP S +T++ G+E+ + +
Sbjct: 16 DRVIAALETVRPYLQVDGGDCQLVGITKDMVVDVKLLGACGSCPMSTITLRAGVEQAIKK 75
Query: 144 KIPEIVAVESV 154
IPEI VESV
Sbjct: 76 AIPEIARVESV 86
>gi|325285793|ref|YP_004261583.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga lytica
DSM 7489]
gi|324321247|gb|ADY28712.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga lytica
DSM 7489]
Length = 79
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEIDGNV-VRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
N+E L+EIRP+L SDGG+++L ID + V++KL+GAC C + MT+K G+E + +
Sbjct: 9 NVEKALEEIRPFLQSDGGDISLISIDNDTSVKVKLEGACVGCSVNQMTLKSGVEMTIKKY 68
Query: 145 IPEIVAVESVA 155
+P+I V +V
Sbjct: 69 VPQIEEVINVG 79
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 167 NIEKVLEEIRPYLVGAAGGSLELVTID-EPIVKVRITGPAAGV----MTVRVAVTQKLRE 221
N+EK LEEIRP+L + GG + L++ID + VKV++ G G MT++ V +++
Sbjct: 9 NVEKALEEIRPFL-QSDGGDISLISIDNDTSVKVKLEGACVGCSVNQMTLKSGVEMTIKK 67
Query: 222 KIPAIAAV 229
+P I V
Sbjct: 68 YVPQIEEV 75
>gi|449018494|dbj|BAM81896.1| similar to iron-sulfur cluster scaffold protein [Cyanidioschyzon
merolae strain 10D]
Length = 597
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 74 PDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEID--GNVVRLKLQGACGSCPSSVM 131
PD+ LPL+ +E+ L E+RP L DGG+V + +D VRL+ GAC SCP+
Sbjct: 431 PDT--RLPLSVTTVEAALSEVRPLLQKDGGDVQVVSVDPENATVRLQFLGACASCPALED 488
Query: 132 TMKMGIERRLMEKIPE--IVAVESV-ADEETGLELNE----ENIEKVLEEIRPYLVGAAG 184
T++ G+E L + E + +E V E T E N E+ E VL+E+RP L A
Sbjct: 489 TVRFGVEIALRKYFGEERVRNIELVPVTESTLWEQNNKKLLESCEVVLDELRPSLF-AQE 547
Query: 185 GSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLR 220
EL ++ ++ +R + + + +++++R
Sbjct: 548 AVFELERVERGVLYLRYSSSDDVLYQISRIISERVR 583
>gi|304393809|ref|ZP_07375734.1| putative NFU1 iron-sulfur cluster scaffold-like protein [Ahrensia
sp. R2A130]
gi|303294008|gb|EFL88383.1| putative NFU1 iron-sulfur cluster scaffold-like protein [Ahrensia
sp. R2A130]
Length = 190
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
+RP + DGG++ H V LK++GAC CPSS T++ GI+ L IPE+ AVE+
Sbjct: 129 VRPAVAQDGGDITFHGFKDGRVYLKMRGACAGCPSSTATLQHGIQNLLKHFIPEVEAVEA 188
Query: 154 VA 155
VA
Sbjct: 189 VA 190
>gi|258541120|ref|YP_003186553.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-01]
gi|384041041|ref|YP_005479785.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-12]
gi|384049556|ref|YP_005476619.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-03]
gi|384052666|ref|YP_005485760.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-07]
gi|384055898|ref|YP_005488565.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-22]
gi|384058539|ref|YP_005497667.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-26]
gi|384061833|ref|YP_005482475.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-32]
gi|384117909|ref|YP_005500533.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|421848932|ref|ZP_16281917.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus NBRC 101655]
gi|256632198|dbj|BAH98173.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-01]
gi|256635255|dbj|BAI01224.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-03]
gi|256638310|dbj|BAI04272.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-07]
gi|256641364|dbj|BAI07319.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-22]
gi|256644419|dbj|BAI10367.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-26]
gi|256647474|dbj|BAI13415.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-32]
gi|256650527|dbj|BAI16461.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256653518|dbj|BAI19445.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-12]
gi|371460201|dbj|GAB27120.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus NBRC 101655]
Length = 186
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ +VRL +QGAC CPSS T+K G+E L
Sbjct: 116 QIKELLDTRVRPAVAGDGGDIVFRGYRNGIVRLTMQGACSGCPSSRATLKHGVENMLRHY 175
Query: 145 IPEIVAVESV 154
+PE+V+VE V
Sbjct: 176 VPEVVSVEQV 185
>gi|409401437|ref|ZP_11251222.1| nitrogen fixing thioredoxin-like protein NifU [Acidocella sp.
MX-AZ02]
gi|409129788|gb|EKM99611.1| nitrogen fixing thioredoxin-like protein NifU [Acidocella sp.
MX-AZ02]
Length = 184
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 85 ENIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I+ +LD IRP + DGG++ VV LK+QGAC CPSS T+K GIE L
Sbjct: 113 DQIKELLDSRIRPAVAGDGGDIIFRGYRDGVVSLKMQGACAGCPSSTATLKHGIENMLKH 172
Query: 144 KIPEIVAVESVA 155
IPE+ +V A
Sbjct: 173 YIPEVTSVTQAA 184
>gi|332296888|ref|YP_004438810.1| nitrogen-fixing NifU domain-containing protein [Treponema
brennaborense DSM 12168]
gi|332179991|gb|AEE15679.1| nitrogen-fixing NifU domain-containing protein [Treponema
brennaborense DSM 12168]
Length = 76
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEID-GNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ ++ LD+IRP L +DGG++ ++ G V +KL GACG+CP + MT+K G+ER L +
Sbjct: 5 DKVKDALDKIRPQLQADGGDLEFVSMEAGGKVFVKLTGACGNCPMATMTLKQGVERFLKD 64
Query: 144 KIPEIVAV 151
IPE+ V
Sbjct: 65 TIPEVTEV 72
>gi|294012036|ref|YP_003545496.1| nitrogen-fixing NifU-like protein [Sphingobium japonicum UT26S]
gi|390167357|ref|ZP_10219348.1| nitrogen-fixing NifU-like protein [Sphingobium indicum B90A]
gi|292675366|dbj|BAI96884.1| nitrogen-fixing NifU-like protein [Sphingobium japonicum UT26S]
gi|389590059|gb|EIM68064.1| nitrogen-fixing NifU-like protein [Sphingobium indicum B90A]
Length = 190
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALH 108
H S + L R A V + D + + A+ E + +RP + +DGG++
Sbjct: 85 HFSANMPLFRPGSAGEIFVPQEEEFADDPEDEEIVAQIRELIDTRVRPAVANDGGDIIYR 144
Query: 109 EIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 154
D V L++QGAC CPSS T+K GIE+ L +PE+ V +V
Sbjct: 145 GFDKGTVYLRMQGACSGCPSSTATLKNGIEQLLKHYVPEVTEVRAV 190
>gi|288959669|ref|YP_003450010.1| thioredoxin [Azospirillum sp. B510]
gi|288911977|dbj|BAI73466.1| thioredoxin [Azospirillum sp. B510]
Length = 185
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E I+ +LD +RP + DGG++ + VV L ++GAC CPSS T+K GIE L
Sbjct: 114 EQIKELLDTRVRPSVAQDGGDITFQGFERGVVYLAMKGACSGCPSSTATLKHGIENMLRH 173
Query: 144 KIPEIVAVESV 154
IPE+V V +V
Sbjct: 174 YIPEVVEVRAV 184
>gi|254797154|ref|YP_003081992.1| hira-interacting protein 5 [Neorickettsia risticii str. Illinois]
gi|254590399|gb|ACT69761.1| hira-interacting protein 5 [Neorickettsia risticii str. Illinois]
Length = 180
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 84 AENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
++ I ++D ++RP +I DGGNV +V LKLQGAC CPS+ +T+K GIE L
Sbjct: 109 SKKIREIIDTKVRPSVIEDGGNVVFKGYKDGIVYLKLQGACAGCPSASVTLKDGIENLLQ 168
Query: 143 EKIPEIVAVESV 154
+PE+ V+ V
Sbjct: 169 YYVPEVREVQQV 180
>gi|258565761|ref|XP_002583625.1| HIRA-interacting protein 5 [Uncinocarpus reesii 1704]
gi|237907326|gb|EEP81727.1| HIRA-interacting protein 5 [Uncinocarpus reesii 1704]
Length = 316
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 14/106 (13%)
Query: 94 IRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
IRP + DGG++ DGNV+ LKL+GAC +C SS +T+K GIE LM I E+ +V
Sbjct: 214 IRPAIQEDGGDIEFRGFKDGNVM-LKLRGACRTCDSSTVTLKNGIESMLMHYIEEVTSVT 272
Query: 153 SVADEETGLELNEENIEKVLEEIR--------PYLVGAAGGSLELV 190
V D+E + + E E+ E++R P +G GSL+ V
Sbjct: 273 QVLDQEEEVAMKE--FERFEEKLRQQKGPDAAPSTIGK--GSLDTV 314
>gi|421852746|ref|ZP_16285431.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371479077|dbj|GAB30634.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 186
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ +VRL +QGAC CPSS T+K G+E L
Sbjct: 116 QIKELLDTRVRPAVAGDGGDIVFRGYRNGIVRLTMQGACSGCPSSRATLKHGVENMLRHY 175
Query: 145 IPEIVAVESV 154
+PE+V+VE V
Sbjct: 176 VPEVVSVEQV 185
>gi|148260770|ref|YP_001234897.1| NifU domain-containing protein [Acidiphilium cryptum JF-5]
gi|338984105|ref|ZP_08633212.1| NifU domain-containing protein [Acidiphilium sp. PM]
gi|146402451|gb|ABQ30978.1| nitrogen-fixing NifU domain protein [Acidiphilium cryptum JF-5]
gi|338206968|gb|EGO94998.1| NifU domain-containing protein [Acidiphilium sp. PM]
Length = 185
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 84 AENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
A+ I+ +LD +RP + DGG++ +V L +QGAC CPSS T+KMGIE L
Sbjct: 112 ADQIKELLDMRVRPAVAGDGGDIVFRGFRDGIVSLHMQGACSGCPSSTATLKMGIENLLK 171
Query: 143 EKIPEIVAVESV 154
+PE+ +V V
Sbjct: 172 HYVPEVKSVRQV 183
>gi|389879378|ref|YP_006372943.1| thioredoxin [Tistrella mobilis KA081020-065]
gi|388530162|gb|AFK55359.1| thioredoxin [Tistrella mobilis KA081020-065]
Length = 181
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
+RP + DGG++ D +V L++ GAC CPSS MT+K GIE L +PE+V V
Sbjct: 121 VRPAVAQDGGDIVFEGFDHGIVYLQMHGACSGCPSSTMTLKNGIETMLKHYVPEVVEVRQ 180
Query: 154 V 154
V
Sbjct: 181 V 181
>gi|240279904|gb|EER43409.1| HIRA-interacting protein [Ajellomyces capsulatus H143]
gi|325093032|gb|EGC46342.1| HIRA-interacting protein [Ajellomyces capsulatus H88]
Length = 314
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V LKL+GAC +C SS +T+K GIE LM I E+ V
Sbjct: 217 IRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVKGVNH 276
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V D+E + L+E K E++R
Sbjct: 277 VLDQEEEVGLHE--FAKFEEKLR 297
>gi|325982994|ref|YP_004295396.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. AL212]
gi|325532513|gb|ADZ27234.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. AL212]
Length = 186
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Query: 57 IRKRGAARRNVIKAVATPDSAI-----ELPLTAENIESVLDE-IRPYLISDGGNVALHEI 110
IR AA + VAT A+ E L E I +LDE +RPYL SDGG++ + +
Sbjct: 84 IRAAPAASAQSAETVATASQALANLNPEDQLRLEKINILLDEEVRPYLQSDGGDLHILGL 143
Query: 111 DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
+GN++ + QGACG+CPSS+ GIE L P+I V S
Sbjct: 144 EGNILHIHYQGACGTCPSSISGTLRGIENMLRTLEPDIQVVAS 186
>gi|310877201|gb|ADP36961.1| hypothetical protein [Asterochloris sp. DA2]
Length = 141
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 6/78 (7%)
Query: 94 IRPYLISDGGNVALHEIDGN--VVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
IRP ++ DGG++ D N +V+LK+QGAC CPSS +T+K GIE L IPE+ ++
Sbjct: 57 IRPAVMEDGGDIVFQGFDENSGIVKLKMQGACSGCPSSAVTLKSGIENMLKHYIPEVKSM 116
Query: 152 ---ESVADEETGL-ELNE 165
E A E+ GL E N+
Sbjct: 117 MEGEPDAAEKAGLSEFNK 134
>gi|326403969|ref|YP_004284051.1| hypothetical protein ACMV_18220 [Acidiphilium multivorum AIU301]
gi|325050831|dbj|BAJ81169.1| hypothetical protein ACMV_18220 [Acidiphilium multivorum AIU301]
Length = 185
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 84 AENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
A+ I+ +LD +RP + DGG++ +V L +QGAC CPSS T+KMGIE L
Sbjct: 112 ADQIKELLDMRVRPAVAGDGGDIVFRGFRDGIVSLHMQGACSGCPSSTATLKMGIENLLK 171
Query: 143 EKIPEIVAVESV 154
+PE+ +V V
Sbjct: 172 HYVPEVKSVRQV 183
>gi|261194942|ref|XP_002623875.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis SLH14081]
gi|239587747|gb|EEQ70390.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis SLH14081]
Length = 318
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V LKL+GAC +C SS +T+K GIE LM I E+ V
Sbjct: 220 IRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVKEVNH 279
Query: 154 VADEETGLELNE-ENIEKVLEEIRPYLVGAAGGSLE 188
V D+E + L+E E+ L + + AA SL+
Sbjct: 280 VLDQEEEVGLHEFAKFEEKLRQQKGPQATAASSSLD 315
>gi|296171555|ref|ZP_06852819.1| Rieske family iron-sulfur cluster-binding protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295894117|gb|EFG73878.1| Rieske family iron-sulfur cluster-binding protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 305
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
+ LD +RPYL S GG+V L EI D VVRL G+C SCPSS +T+++ ++ +
Sbjct: 106 VSDALDRVRPYLGSHGGDVDLLEITDDGVVRLAFAGSCKSCPSSAVTLELAVQDAVCAAA 165
Query: 146 PEIVAVESVADE 157
PE+ ++E+V E
Sbjct: 166 PEVSSIEAVTAE 177
>gi|66808847|ref|XP_638146.1| NIF system FeS cluster assembly domain-containing protein
[Dictyostelium discoideum AX4]
gi|60466582|gb|EAL64634.1| NIF system FeS cluster assembly domain-containing protein
[Dictyostelium discoideum AX4]
Length = 314
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP ++ DGGN+ +V ++LQG C SC SS T+K GIER LM I E+ V +
Sbjct: 224 IRPTVLEDGGNIKYMGFKDGIVMVQLQGTCSSCSSSQATLKGGIERMLMHWISEVTGVIA 283
Query: 154 VADEETGLELNEENIE 169
V D+ ELN+ N++
Sbjct: 284 VPDD----ELNQLNLD 295
>gi|414342401|ref|YP_006983922.1| NifU protein [Gluconobacter oxydans H24]
gi|411027736|gb|AFW00991.1| NifU protein [Gluconobacter oxydans H24]
Length = 205
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 71 VATPDSAIELPLTAEN------IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGAC 123
+A D A++ + E+ I +LD +RP + DGG++A +V L +QGAC
Sbjct: 113 LAGDDEALKYDIAPEDADVVVRIRDLLDTRVRPAVAGDGGDIAFRGYKDGIVYLTMQGAC 172
Query: 124 GSCPSSVMTMKMGIERRLMEKIPEIVAVESVAD 156
CPSS T+K G+E L +PE+ +VE V D
Sbjct: 173 SGCPSSRATLKHGVENMLRHYVPEVQSVEQVED 205
>gi|322710719|gb|EFZ02293.1| NifU-like protein [Metarhizium anisopliae ARSEF 23]
Length = 297
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ D V+LKL+GAC +C SS +T+K GIE LM I E+ V
Sbjct: 211 IRPAIQEDGGDIEFRGFDDGYVKLKLRGACRTCDSSTVTLKNGIEGMLMHYIEEVKGVHQ 270
Query: 154 VADEETGLELNE 165
+ D+E + + E
Sbjct: 271 ILDQEEEIAMEE 282
>gi|154281411|ref|XP_001541518.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411697|gb|EDN07085.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 279
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V LKL+GAC +C SS +T+K GIE LM I E+ V
Sbjct: 182 IRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVKGVNH 241
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V D+E + L+E K E++R
Sbjct: 242 VLDQEEEVGLHE--FAKFEEKLR 262
>gi|327348799|gb|EGE77656.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis ATCC 18188]
Length = 318
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V LKL+GAC +C SS +T+K GIE LM I E+ V
Sbjct: 220 IRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVKEVNH 279
Query: 154 VADEETGLELNE-ENIEKVLEEIRPYLVGAAGGSLE 188
V D+E + L+E E+ L + + AA SL+
Sbjct: 280 VLDQEEEVGLHEFAKFEEKLRQQKGPQATAASSSLD 315
>gi|430747488|ref|YP_007206617.1| thioredoxin-like protein [Singulisphaera acidiphila DSM 18658]
gi|430019208|gb|AGA30922.1| thioredoxin-like protein [Singulisphaera acidiphila DSM 18658]
Length = 85
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEID-GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+E+VL+E +RP L +DGG++ L +ID N+V+++LQGAC C S+ T+ MGIE L
Sbjct: 15 VEAVLNEHVRPTLRADGGDLELVDIDEDNIVQVRLQGACQGCSSASYTLTMGIEATLKSH 74
Query: 145 IPEIVAVESV 154
+PEI +E+V
Sbjct: 75 VPEIRFIEAV 84
>gi|86606476|ref|YP_475239.1| Fe-S cluster assembly protein NifU [Synechococcus sp. JA-3-3Ab]
gi|86555018|gb|ABC99976.1| Fe-S cluster assembly protein NifU [Synechococcus sp. JA-3-3Ab]
Length = 312
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 68 IKAVATPDSAIELPLTAENIESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSC 126
+ A ATP L A I++VL+E +RP L++DGG+V L++++G+ V ++L+G+C +C
Sbjct: 226 VSATATPPPLTTLQKIA-RIQAVLEEEVRPLLLADGGDVELYDLEGDQVWVRLKGSCTTC 284
Query: 127 PSSVMTMKMGIERRLMEKIPEIVAVESV 154
PS T+++ IE RL E++ + V ++
Sbjct: 285 PSQQNTLRLLIETRLQEQVWPTLTVHAL 312
>gi|225563079|gb|EEH11358.1| HIRA-interacting protein [Ajellomyces capsulatus G186AR]
Length = 314
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V LKL+GAC +C SS +T+K GIE LM I E+ V
Sbjct: 217 IRPAIQEDGGDIEFRGFEDGIVSLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVKGVNH 276
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V D+E + L+E K E++R
Sbjct: 277 VLDQEEEVGLHE--FAKFEEKLR 297
>gi|116873760|ref|YP_850541.1| NifU family protein [Listeria welshimeri serovar 6b str. SLCC5334]
gi|116742638|emb|CAK21762.1| NifU family protein [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 78
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
++ L + RP+L+ DGG+ L E+ DG +V++KL GAC +CPSS MT+KMGIE L E
Sbjct: 8 EVDKALKKFRPFLVRDGGDYELIEVTPDG-IVKIKLLGACETCPSSDMTLKMGIELTLAE 66
Query: 144 KI 145
KI
Sbjct: 67 KI 68
>gi|392967234|ref|ZP_10332652.1| nitrogen-fixing NifU domain protein [Fibrisoma limi BUZ 3]
gi|387844031|emb|CCH54700.1| nitrogen-fixing NifU domain protein [Fibrisoma limi BUZ 3]
Length = 200
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 83 TAENIESVLDE-IRPYLISDGGNVALHEID--GNVVRLKLQGACGSCPSSVMTMKMGIER 139
T + I++VLD+ +RP + SDGG + H D V++ LQG+C CPSS +T+K GIE
Sbjct: 124 TVQKIKAVLDQYVRPAVESDGGAINFHSFDEPTGTVKVLLQGSCSGCPSSTLTLKAGIEN 183
Query: 140 RLMEKIPEIVAVES 153
L +P++ VE+
Sbjct: 184 LLTRLVPDVKQVEA 197
>gi|452852324|ref|YP_007494008.1| Nitrogen-fixing NifU domain protein [Desulfovibrio piezophilus]
gi|451895978|emb|CCH48857.1| Nitrogen-fixing NifU domain protein [Desulfovibrio piezophilus]
Length = 75
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +++VL+++RP L SDGG+V L ++ +V+++L GAC CP S MT+K GIER +++
Sbjct: 4 EKVQAVLEKVRPMLQSDGGDVELVDVTKSGIVQVRLTGACKGCPMSQMTLKNGIERIVLK 63
Query: 144 KIPEIVAVESV 154
++ E VE+V
Sbjct: 64 EVAEAKGVEAV 74
>gi|392380839|ref|YP_005030035.1| putative iron-sulfur cluster scaffold,NifU-like [Azospirillum
brasilense Sp245]
gi|356875803|emb|CCC96551.1| putative iron-sulfur cluster scaffold,NifU-like [Azospirillum
brasilense Sp245]
Length = 184
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ + + VV L+++GAC CPSS T+K GIE L
Sbjct: 114 QIKELLDTRVRPAVAQDGGDITFYGFEEGVVYLEMKGACSGCPSSTATLKAGIENMLRHY 173
Query: 145 IPEIVAVESV 154
IPE+V V +V
Sbjct: 174 IPEVVEVRAV 183
>gi|189200054|ref|XP_001936364.1| HIRA-interacting protein 5 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983463|gb|EDU48951.1| HIRA-interacting protein 5 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 312
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
+RP + DGG++ + V LKL+GAC +C SS +T+K GIE LM I E+ V+
Sbjct: 211 VRPAIQEDGGDIEFRGFNDGQVWLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVKGVQQ 270
Query: 154 VADEETGLELNE--ENIEKVLEEIRPYLV-GAAG-GSLELV 190
V D+E + L E + EK+ ++ P V G G GSL+ V
Sbjct: 271 VLDQEEEIALKEFAKFEEKLRQQKGPDAVAGTVGKGSLDYV 311
>gi|390442777|ref|ZP_10230577.1| nitrogen-fixing NifU domain-containing protein [Nitritalea
halalkaliphila LW7]
gi|389667420|gb|EIM78840.1| nitrogen-fixing NifU domain-containing protein [Nitritalea
halalkaliphila LW7]
Length = 73
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIE 138
IE LD IRPYL +DGGNV + E+ + V+RL+L GACG+CP S MT+K G+E
Sbjct: 9 IEVALDSIRPYLEADGGNVKIVELTEDMVLRLELLGACGTCPMSTMTLKAGVE 61
>gi|262277769|ref|ZP_06055562.1| NifU domain protein [alpha proteobacterium HIMB114]
gi|262224872|gb|EEY75331.1| NifU domain protein [alpha proteobacterium HIMB114]
Length = 179
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 87 IESVL-DEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
IE VL D+IRP + DGG++ L V + L+GAC CPSS +T+K G+ER + +
Sbjct: 107 IEEVLNDKIRPAVAMDGGDIRLKSFKDGVAEVMLKGACAGCPSSTVTLKHGVERMIKHYV 166
Query: 146 PEIVAVESV 154
PE+ +VE+
Sbjct: 167 PEVTSVEAF 175
>gi|17541876|ref|NP_501917.1| Protein LPD-8 [Caenorhabditis elegans]
gi|3879150|emb|CAA94609.1| Protein LPD-8 [Caenorhabditis elegans]
Length = 222
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ D VV+LK+QG+C CPSS +T+K GIE L +PE+ V
Sbjct: 139 IRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLTFYVPEVKEVIE 198
Query: 154 VADEETGL 161
V DE L
Sbjct: 199 VKDESDDL 206
>gi|294085162|ref|YP_003551922.1| nitrogen-fixing NifU domain-containing protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292664737|gb|ADE39838.1| nitrogen-fixing NifU domain protein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 187
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I+ +LD +RP + DGG++ + D VV L+++GAC CPSS T+KMGIE L
Sbjct: 115 KQIKHLLDTRVRPAVAMDGGDIVFQDFDDGVVTLQMRGACQGCPSSTATLKMGIENMLKH 174
Query: 144 KIPEI 148
IP++
Sbjct: 175 YIPQV 179
>gi|268570156|ref|XP_002648431.1| C. briggsae CBR-LPD-8 protein [Caenorhabditis briggsae]
Length = 228
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ D VV+LK+QG+C CPSS +T+K GIE L +PE+ V
Sbjct: 145 IRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLTFYVPEVKEVIE 204
Query: 154 VADEETGL 161
V DE L
Sbjct: 205 VKDESDDL 212
>gi|343425855|emb|CBQ69388.1| related to NFU-1 protein (iron homeostasis) [Sporisorium reilianum
SRZ2]
Length = 294
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 87 IESVLD-EIRPYLISDGGNVAL----HEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRL 141
I+ +LD +RP + DGG++ + DG +V++KL+G+C C SS +T+K GIER L
Sbjct: 190 IKELLDTRVRPAIQEDGGDLEYRGFGEDTDG-IVKVKLKGSCRGCDSSTVTLKSGIERML 248
Query: 142 MEKIPEIVAVESVADEETGLELNE-ENIEKVLEEIR 176
IPE+ VE V D E + L+E +E+ LE+ R
Sbjct: 249 KHYIPEVQGVEQVLDPEEEIALDEFAKLEQKLEKDR 284
>gi|333919642|ref|YP_004493223.1| Rieske family iron-sulfur cluster-binding protein [Amycolicicoccus
subflavus DQS3-9A1]
gi|333481863|gb|AEF40423.1| Rieske family iron-sulfur cluster-binding protein [Amycolicicoccus
subflavus DQS3-9A1]
Length = 302
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+ LD +RPYL S GG+V L I+ VV L+ QG C SCPSS T+++ +E + P
Sbjct: 92 VRRALDSVRPYLGSHGGDVDLIGIEDGVVHLRFQGTCKSCPSSTATLELAVEGAIKAAAP 151
Query: 147 EIVAVES 153
E+ ++E+
Sbjct: 152 EVTSIEA 158
>gi|300785684|ref|YP_003765975.1| thioredoxin-like protein [Amycolatopsis mediterranei U32]
gi|384148990|ref|YP_005531806.1| thioredoxin-like protein [Amycolatopsis mediterranei S699]
gi|399537568|ref|YP_006550230.1| thioredoxin-like protein [Amycolatopsis mediterranei S699]
gi|299795198|gb|ADJ45573.1| thioredoxin-like protein [Amycolatopsis mediterranei U32]
gi|340527144|gb|AEK42349.1| thioredoxin-like protein [Amycolatopsis mediterranei S699]
gi|398318338|gb|AFO77285.1| thioredoxin-like protein [Amycolatopsis mediterranei S699]
Length = 172
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 39/64 (60%)
Query: 83 TAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
T E + LD++RPYL S G+V EI V+RL+LQG C CPSS +T K IER +
Sbjct: 76 THERVTEALDKVRPYLGSHAGDVEFVEIADGVLRLRLQGTCDGCPSSTVTAKYAIERVVR 135
Query: 143 EKIP 146
E P
Sbjct: 136 EAAP 139
>gi|337269974|ref|YP_004614029.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Mesorhizobium opportunistum WSM2075]
gi|336030284|gb|AEH89935.1| Rieske (2Fe-2S) iron-sulfur domain protein [Mesorhizobium
opportunistum WSM2075]
Length = 290
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 81 PLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERR 140
P +E +E+ LD +RP L S GGNV L + + ++ GAC CP+S +T G+++
Sbjct: 92 PSLSERVEAALDGVRPMLASHGGNVELVNVRPPAIEVRFVGACDGCPASALTFHAGVKKA 151
Query: 141 LMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDE 194
+ E PEI + + G+ +N + + P+ +GA GG + +DE
Sbjct: 152 IEEACPEITDIVQI----KGMSNAADN--DSVRFVSPFALGAVGGWHLVCRLDE 199
Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAG----VMTVRVAVTQKLRE 221
E +E L+ +RP L + GG++ELV + P ++VR G G +T V + + E
Sbjct: 96 ERVEAALDGVRPMLA-SHGGNVELVNVRPPAIEVRFVGACDGCPASALTFHAGVKKAIEE 154
Query: 222 KIPAIAAV 229
P I +
Sbjct: 155 ACPEITDI 162
>gi|428309608|ref|YP_007120585.1| Modular FeS cluster scaffolding protein NifU [Microcoleus sp. PCC
7113]
gi|428251220|gb|AFZ17179.1| Modular FeS cluster scaffolding protein NifU [Microcoleus sp. PCC
7113]
Length = 300
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 92 DEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
+E++P L DGG+V L +++G+ V ++L+GACGSC SS T+K+ IE RL E++ + V
Sbjct: 238 EEVKPVLALDGGDVELFDVEGDRVLVQLKGACGSCSSSTATLKIAIEARLQERVLPSLVV 297
Query: 152 ESV 154
E+V
Sbjct: 298 EAV 300
>gi|374320333|ref|YP_005073462.1| protein NifU [Paenibacillus terrae HPL-003]
gi|357199342|gb|AET57239.1| nifu [Paenibacillus terrae HPL-003]
Length = 79
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E+++ VL +RP+L DGG+ L ++ V +LK GAC CPS+ +T+K GIER + E+
Sbjct: 9 EDVDDVLRRLRPFLNRDGGDAELVQVKDGVAKLKFLGACNGCPSTTITLKAGIERAIFEE 68
Query: 145 IPEIVAVESV 154
+ I V V
Sbjct: 69 VDGIHEVVQV 78
>gi|332878832|ref|ZP_08446547.1| NifU-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332683183|gb|EGJ56065.1| NifU-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 78
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E +++ LD+IRPYL +DGG++ L +I D +V+++L+G C +C + MT+K G+E + E
Sbjct: 8 EEVKNALDKIRPYLQNDGGDITLVDIEDDKIVKVRLEGTCTNCAVNQMTLKSGVEMTIKE 67
Query: 144 KIPEIVAVESV 154
+P+I V S+
Sbjct: 68 FVPQIEQVISI 78
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 159 TGLELNEENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGP----AAGVMTVRV 213
T EL EE ++ L++IRPYL GG + LV I D+ IVKVR+ G A MT++
Sbjct: 2 TSEELREE-VKNALDKIRPYLQND-GGDITLVDIEDDKIVKVRLEGTCTNCAVNQMTLKS 59
Query: 214 AVTQKLREKIPAIAAV 229
V ++E +P I V
Sbjct: 60 GVEMTIKEFVPQIEQV 75
>gi|451980867|ref|ZP_21929252.1| conserved hypothetical protein [Nitrospina gracilis 3/211]
gi|451761989|emb|CCQ90495.1| conserved hypothetical protein [Nitrospina gracilis 3/211]
Length = 73
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ +ESVLD +RP L+ DGGNV L +I+ +V+L+L G+C SC SS MT+KMGIER L +
Sbjct: 3 DEVESVLDTLRPQLMQDGGNVELVDIEDGIVKLRLVGSCSSCSSSTMTLKMGIERALKKA 62
Query: 145 IPEIVAVESV 154
IP + +E+V
Sbjct: 63 IPMVRCIEAV 72
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITG----PAAGVMTVRVAVTQKLR 220
++ +E VL+ +RP L+ GG++ELV I++ IVK+R+ G ++ MT+++ + + L+
Sbjct: 2 KDEVESVLDTLRPQLM-QDGGNVELVDIEDGIVKLRLVGSCSSCSSSTMTLKMGIERALK 60
Query: 221 EKIPAIAAVQ 230
+ IP + ++
Sbjct: 61 KAIPMVRCIE 70
>gi|374313093|ref|YP_005059523.1| nitrogen-fixing NifU domain-containing protein [Granulicella
mallensis MP5ACTX8]
gi|358755103|gb|AEU38493.1| nitrogen-fixing NifU domain-containing protein [Granulicella
mallensis MP5ACTX8]
Length = 197
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 91 LDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP---E 147
++ +RPYL GG+ L +D +VRL+L G CGSCPSS +T+K +E L + P E
Sbjct: 119 IESVRPYLQEHGGDCELAGLDNGIVRLRLHGNCGSCPSSSLTLKNAVEEALFQAAPDIKE 178
Query: 148 IVAVESVA 155
I+A S A
Sbjct: 179 IIAENSAA 186
>gi|341887429|gb|EGT43364.1| CBN-LPD-8 protein [Caenorhabditis brenneri]
Length = 228
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ D VV+LK+QG+C CPSS +T+K GIE L +PE+ V
Sbjct: 145 IRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLTFYVPEVKEVIE 204
Query: 154 VADEETGL 161
V DE L
Sbjct: 205 VKDESDDL 212
>gi|289435662|ref|YP_003465534.1| NifU family protein [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|422419961|ref|ZP_16496916.1| nitrogen fixation protein NifU [Listeria seeligeri FSL N1-067]
gi|422423109|ref|ZP_16500062.1| nitrogen fixation protein NifU [Listeria seeligeri FSL S4-171]
gi|289171906|emb|CBH28452.1| NifU family protein [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313632102|gb|EFR99193.1| nitrogen fixation protein NifU [Listeria seeligeri FSL N1-067]
gi|313636487|gb|EFS02228.1| nitrogen fixation protein NifU [Listeria seeligeri FSL S4-171]
Length = 78
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIER 139
++ ++ L + RP+L+ DGG+ L E+ DG V ++KL GAC +CPSS MT+KMGIE
Sbjct: 4 ISYAEVDKALKKFRPFLVRDGGDYELVEVTPDGTV-KIKLLGACETCPSSDMTLKMGIEL 62
Query: 140 RLMEKI 145
L EKI
Sbjct: 63 TLAEKI 68
>gi|409199108|ref|ZP_11227771.1| nitrogen-fixing NifU domain-containing protein [Marinilabilia
salmonicolor JCM 21150]
Length = 79
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 91 LDEIRPYLISDGGNVALHEIDGNV-VRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV 149
LD IRPYL SDGG++ E+ ++ V+++L GAC CP S+ T+K G+E + +K+PEI+
Sbjct: 14 LDSIRPYLQSDGGDIVFVELTDDLQVKVQLTGACDGCPMSLQTLKGGVEMVVKQKVPEIL 73
Query: 150 AVESV 154
V +V
Sbjct: 74 EVVAV 78
>gi|398411907|ref|XP_003857287.1| hypothetical protein MYCGRDRAFT_107316 [Zymoseptoria tritici
IPO323]
gi|339477172|gb|EGP92263.1| hypothetical protein MYCGRDRAFT_107316 [Zymoseptoria tritici
IPO323]
Length = 317
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ V LKL+GAC +C SS +T+K GIE LM I
Sbjct: 216 IQELLDTRIRPAIQEDGGDIEFRGFHDGQVMLKLRGACRTCDSSTVTLKNGIESMLMHYI 275
Query: 146 PEIVAVESVADEETGLELNE 165
E+ V+ V D+E + L E
Sbjct: 276 EEVKGVQQVLDQEEEVALQE 295
>gi|321496482|gb|EAQ38213.2| NifU-like protein [Dokdonia donghaensis MED134]
Length = 88
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ +E L+EIRP+L SDGG+++L ID + VVR++LQGAC C + MT+K G+E + +
Sbjct: 16 QKVEDALEEIRPFLQSDGGDISLLGIDDDRVVRVQLQGACVGCSVNQMTLKSGVEMTIKK 75
Query: 144 KIPEIVAVESV 154
P+I V +V
Sbjct: 76 HAPQIEQVINV 86
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 166 ENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAGV----MTVRVAVTQKLR 220
+ +E LEEIRP+L + GG + L+ ID+ +V+V++ G G MT++ V ++
Sbjct: 16 QKVEDALEEIRPFL-QSDGGDISLLGIDDDRVVRVQLQGACVGCSVNQMTLKSGVEMTIK 74
Query: 221 EKIPAIAAV 229
+ P I V
Sbjct: 75 KHAPQIEQV 83
>gi|193212089|ref|YP_001998042.1| nitrogen-fixing NifU domain-containing protein [Chlorobaculum
parvum NCIB 8327]
gi|193085566|gb|ACF10842.1| nitrogen-fixing NifU domain protein [Chlorobaculum parvum NCIB
8327]
Length = 83
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ + S L+ +RPYL DGG+ L I + VV +KL GACGSCP S +T++ G+E+ + +
Sbjct: 13 DRVISALETVRPYLQVDGGDCQLIGITKDMVVDVKLLGACGSCPMSTLTLRAGVEQAIKK 72
Query: 144 KIPEIVAVESV 154
IPEI VE V
Sbjct: 73 AIPEIARVEQV 83
>gi|398382814|ref|ZP_10540895.1| thioredoxin-like protein [Sphingobium sp. AP49]
gi|397726214|gb|EJK86655.1| thioredoxin-like protein [Sphingobium sp. AP49]
Length = 192
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 30 TKSFFG-ERVSLT-----RWRNP--------VCHSSCRLLLIRKRGAARRNVIKAVATPD 75
T FFG + +S+T WR+ + H S + L AA I A +
Sbjct: 53 TGVFFGGDFISVTIAPGAEWRDVKPEILSILLDHFSANMPLFAPGSAAG---ISVPAEEE 109
Query: 76 SAIELPLTAENIESVLD----EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVM 131
+ P AE ++ + D +RP + +DGG++ D V L++QGAC CPSS
Sbjct: 110 GFADDPEDAEIVDQIKDLIETRVRPAVANDGGDIIYRGFDKGTVFLRMQGACAGCPSSSA 169
Query: 132 TMKMGIERRLMEKIPEIVAVESV 154
T+K GIE+ L +PE+ V +V
Sbjct: 170 TLKNGIEQLLKHYVPEVTEVRAV 192
>gi|116781621|gb|ABK22181.1| unknown [Picea sitchensis]
Length = 181
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 54 LLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEID-- 111
L L K GA I D + + E +E+ IRP + DGG++ D
Sbjct: 70 LFLDSKSGAPTDTAINE----DDDETVAMIKELLET---RIRPAVQDDGGDIEYCGFDPE 122
Query: 112 GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEE 158
VV+LK+QGAC CPSS +T+K GIE LM +PE+ VE D E
Sbjct: 123 TGVVKLKMQGACSGCPSSSLTLKSGIENMLMHYVPEVKGVEQELDPE 169
>gi|159465189|ref|XP_001690805.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158279491|gb|EDP05251.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 319
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 17/156 (10%)
Query: 30 TKSFFG-ERVSLTR---WRNPVCHSS--CRLLLIRKRGAARRNVIKAVATPDSAIELPLT 83
T FFG + V++T+ + PV ++ G A + A+A D+AI P
Sbjct: 135 TSVFFGSDFVTITKKDEYSWPVLKPDVFAAIMEFYASGEALISDADALAASDTAIH-PDD 193
Query: 84 AENIESVLD----EIRPYLISDGGNVAL--HEIDGNVVRLKLQGACGSCPSSVMTMKMGI 137
+E + + + IRP + DGG++ E D +V++KL GAC +CPSS +T+K GI
Sbjct: 194 SEVVAMIKELLETRIRPAVQEDGGDIVFKGFEEDTGMVQVKLVGACSTCPSSTVTLKNGI 253
Query: 138 ERRLMEKIPEIVAVESVADEETGLELNEENIEKVLE 173
E LM IPE+ V +E+ +EE ++ E
Sbjct: 254 ENMLMHYIPEVKGVMEAPPDES----DEEGVKAFAE 285
>gi|406674168|ref|ZP_11081379.1| hypothetical protein HMPREF9700_01921 [Bergeyella zoohelcum CCUG
30536]
gi|423316544|ref|ZP_17294449.1| hypothetical protein HMPREF9699_01020 [Bergeyella zoohelcum ATCC
43767]
gi|405583594|gb|EKB57534.1| hypothetical protein HMPREF9699_01020 [Bergeyella zoohelcum ATCC
43767]
gi|405584579|gb|EKB58469.1| hypothetical protein HMPREF9700_01921 [Bergeyella zoohelcum CCUG
30536]
Length = 81
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 84 AENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ ++ L+ IRP+L DGG++ L +I+ + V +K QG C CP + TMK+G+E + +
Sbjct: 7 TQKVQEALESIRPFLNRDGGDIELVKIEEHKVWVKFQGNCVGCPMNFSTMKLGVENTIKQ 66
Query: 144 KIPEIVAVESVADEE 158
PEI V S+ +EE
Sbjct: 67 FAPEITDVISIEEEE 81
>gi|392415970|ref|YP_006452575.1| thioredoxin-like protein [Mycobacterium chubuense NBB4]
gi|390615746|gb|AFM16896.1| thioredoxin-like protein [Mycobacterium chubuense NBB4]
Length = 295
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 81 PLTAEN-IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
P T E + + LD +RPYL S GG+V+L + VV L+ QG+C SCPSS +T+++ ++
Sbjct: 87 PHTVEQRVSAALDGVRPYLGSHGGDVSLLGVADGVVSLRFQGSCRSCPSSAVTLELAVQD 146
Query: 140 RLMEKIPEIVAVESVADE 157
+ PE+ +E +A E
Sbjct: 147 AIRAAAPEVSDIEVLAAE 164
>gi|325087305|gb|ADY77002.1| iron-sulfur cluster assembly protein NFU4 [Ipomoea batatas]
gi|325087311|gb|ADY77005.1| iron-sulfur cluster assembly protein NFU4 [Ipomoea batatas]
Length = 281
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 94 IRPYLISDGGNVALHEIDGN--VVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
IRP + DGG++ D + +V+L++QGAC CPSS +T+K GIE LM +PE+ V
Sbjct: 204 IRPAVQDDGGDIEYRGFDADSGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKGV 263
Query: 152 ES--VADEETGL 161
E DE+ L
Sbjct: 264 EQEFYEDEDPSL 275
>gi|49476032|ref|YP_034073.1| hypothetical protein BH13490 [Bartonella henselae str. Houston-1]
gi|49238840|emb|CAF28122.1| hypothetical protein BH13490 [Bartonella henselae str. Houston-1]
Length = 192
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + +DGG++ + +V L ++GAC CPSS T+K GIE L IPE+V VE+
Sbjct: 130 IRPAVANDGGDITFRGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHFIPEVVGVEA 189
Query: 154 V 154
+
Sbjct: 190 M 190
>gi|410944411|ref|ZP_11376152.1| NifU protein [Gluconobacter frateurii NBRC 101659]
Length = 212
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 8/96 (8%)
Query: 69 KAV-ATPDSAIELPLTAEN------IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQ 120
KAV A D A++ + E+ I +LD +RP + DGG++A +V L +Q
Sbjct: 117 KAVLAGGDEALKYDVAPEDADVVVRIRDLLDTRVRPAVAGDGGDIAFRGYKDGIVYLTMQ 176
Query: 121 GACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVAD 156
GAC CPSS T+K G+E L +PE+ +VE V D
Sbjct: 177 GACSGCPSSRATLKHGVENMLRHYVPEVQSVEQVED 212
>gi|451817331|ref|YP_007453532.1| thioredoxin TrxA [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451783310|gb|AGF54278.1| thioredoxin TrxA [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 73
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 91 LDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV 149
LD+IRP L DGG+V L ++ + +V +K+QGACG+CP ++MT+KM IE +L E++P I
Sbjct: 9 LDKIRPILQRDGGDVELVDVSEDGIVSVKMQGACGNCPGAMMTIKMIIEEKLKEEVPGIK 68
Query: 150 AVESV 154
V V
Sbjct: 69 KVIGV 73
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 8/71 (11%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITG-----PAAGVMTVRVAVTQK 218
+E I K L++IRP L GG +ELV + E IV V++ G P A +MT+++ + +K
Sbjct: 2 KELIVKSLDKIRPIL-QRDGGDVELVDVSEDGIVSVKMQGACGNCPGA-MMTIKMIIEEK 59
Query: 219 LREKIPAIAAV 229
L+E++P I V
Sbjct: 60 LKEEVPGIKKV 70
>gi|390942867|ref|YP_006406628.1| thioredoxin-like protein [Belliella baltica DSM 15883]
gi|390416295|gb|AFL83873.1| thioredoxin-like protein [Belliella baltica DSM 15883]
Length = 193
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 8/81 (9%)
Query: 81 PLTAEN-------IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMT 132
PL EN I+ +LDE IRP + DGG + H +V++ LQG+C CPSS +T
Sbjct: 110 PLFDENDSEVVKKIKGILDEYIRPAVEQDGGAIVFHSFQDGIVKVLLQGSCSGCPSSTVT 169
Query: 133 MKMGIERRLMEKIPEIVAVES 153
+K GI+ L +PE+ V++
Sbjct: 170 LKAGIQNLLTRMLPEVKEVQA 190
>gi|194337374|ref|YP_002019168.1| nitrogen-fixing NifU domain-containing protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309851|gb|ACF44551.1| nitrogen-fixing NifU domain protein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 86
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNV-VRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ + + L+ +RPYL DGG+ + I ++ V +KL GACGSCP S +T++ G+E+ + +
Sbjct: 16 DRVIAALETVRPYLQVDGGDCQIVGITKDMTVDVKLLGACGSCPMSTLTLRAGVEQAIKK 75
Query: 144 KIPEIVAVESV 154
+PEIV VESV
Sbjct: 76 AVPEIVRVESV 86
>gi|315304549|ref|ZP_07874802.1| nitrogen fixation protein NifU [Listeria ivanovii FSL F6-596]
gi|313627083|gb|EFR95963.1| nitrogen fixation protein NifU [Listeria ivanovii FSL F6-596]
Length = 78
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 82 LTAENIESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIER 139
++ ++ L + RP+L+ DGG+ L E+ DG V ++KL GAC +CPSS MT+KMGIE
Sbjct: 4 ISYAEVDKALKKFRPFLVRDGGDYELVEVTPDGTV-KIKLLGACETCPSSDMTLKMGIEL 62
Query: 140 RLMEKI 145
L EKI
Sbjct: 63 TLSEKI 68
>gi|310643918|ref|YP_003948676.1| protein NifU [Paenibacillus polymyxa SC2]
gi|309248868|gb|ADO58435.1| NifU-like protein [Paenibacillus polymyxa SC2]
gi|392304642|emb|CCI71005.1| Fe/S biogenesis protein nfuA [Paenibacillus polymyxa M1]
Length = 79
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 45/64 (70%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + VL ++RP+L+ DGG+ L E++ + +L+ GAC CPS+ +T+K+ IER ++E+
Sbjct: 9 DEVSEVLLKLRPFLLRDGGDAELVEVENGIAKLRFLGACNGCPSATITLKVAIERAILEE 68
Query: 145 IPEI 148
I +I
Sbjct: 69 IDDI 72
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 157 EETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAG----VMTVR 212
+E G+ +E + +VL ++RP+L+ GG ELV ++ I K+R G G +T++
Sbjct: 2 DENGVLFDE--VSEVLLKLRPFLL-RDGGDAELVEVENGIAKLRFLGACNGCPSATITLK 58
Query: 213 VAVTQKLREKIPAIAAV 229
VA+ + + E+I I V
Sbjct: 59 VAIERAILEEIDDIKEV 75
>gi|392411312|ref|YP_006447919.1| Fe-S cluster assembly protein NifU [Desulfomonile tiedjei DSM 6799]
gi|390624448|gb|AFM25655.1| Fe-S cluster assembly protein NifU [Desulfomonile tiedjei DSM 6799]
Length = 281
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 47 VCHSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVA 106
+CH ++ + RG ++ A P L A+ E + EIRP L DGG+V
Sbjct: 174 LCHDKIEAIIQQVRGERKQAAKTEKAAP-RMTNLQKIAKIQEVIEKEIRPMLQQDGGDVE 232
Query: 107 LHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVAD 156
L ++DGN V + L+G C SCPSS +T K GIE +L E + + VE VA+
Sbjct: 233 LVDLDGNKVFVALRGLCRSCPSSALT-KGGIESKLKELVHPDLFVEEVAE 281
>gi|344202301|ref|YP_004787444.1| nitrogen-fixing NifU domain-containing protein [Muricauda
ruestringensis DSM 13258]
gi|343954223|gb|AEM70022.1| nitrogen-fixing NifU domain-containing protein [Muricauda
ruestringensis DSM 13258]
Length = 81
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 83 TAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
T N+E L+EIRP+L SDGG++ L I+ N V+++L+G C C + MT+K G+E +
Sbjct: 9 TRSNVEKALEEIRPFLQSDGGDITLISIEDNTVKVRLEGNCIGCTVNQMTLKSGVEMTIK 68
Query: 143 EKIPEIVAVESVA 155
+ P+I V +++
Sbjct: 69 KYAPQIEEVINIS 81
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 167 NIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGV----MTVRVAVTQKLREK 222
N+EK LEEIRP+L + GG + L++I++ VKVR+ G G MT++ V +++
Sbjct: 12 NVEKALEEIRPFL-QSDGGDITLISIEDNTVKVRLEGNCIGCTVNQMTLKSGVEMTIKKY 70
Query: 223 IPAIAAV 229
P I V
Sbjct: 71 APQIEEV 77
>gi|116199405|ref|XP_001225514.1| hypothetical protein CHGG_07858 [Chaetomium globosum CBS 148.51]
gi|88179137|gb|EAQ86605.1| hypothetical protein CHGG_07858 [Chaetomium globosum CBS 148.51]
Length = 337
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
+RP + DGG++ + V LKL+GAC +C SS +T+K GIE LM I E+ V
Sbjct: 236 VRPAIQEDGGDIEFRGFENGYVMLKLRGACRTCDSSTVTLKNGIEGMLMHYIEEVQGVHQ 295
Query: 154 VADEETGLELN-----EENIEKVLEEIRPYLVGAAGGSLE 188
V D+E + L EE ++ E+ P VG GSL+
Sbjct: 296 VLDQEEEIALAEFAKFEEKLKAQKGEVPPSTVGK--GSLD 333
>gi|114326814|ref|YP_743971.1| Fe-S cluster assembly protein NFU [Granulibacter bethesdensis
CGDNIH1]
gi|114314988|gb|ABI61048.1| Fe-S cluster assembly protein NFU [Granulibacter bethesdensis
CGDNIH1]
Length = 186
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ I+ +LD +RP + DGG++ VV L +QGAC CPSS T+K GIE L
Sbjct: 114 DQIKELLDTRVRPAVAGDGGDIVFRGYRDGVVLLHMQGACSGCPSSRATLKHGIENMLRH 173
Query: 144 KIPEIVAVESV 154
+PE++AVE V
Sbjct: 174 YVPEVLAVEQV 184
>gi|158520102|ref|YP_001527972.1| NifU domain-containing protein [Desulfococcus oleovorans Hxd3]
gi|158508928|gb|ABW65895.1| nitrogen-fixing NifU domain protein [Desulfococcus oleovorans Hxd3]
Length = 72
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
E +++ LD+IRP L +DGG+V L +++ V ++L+GAC CP S +T+K IE L +
Sbjct: 3 EQVKAALDKIRPQLQADGGDVELVDVENGNVSVRLKGACAGCPMSQITLKQRIEAYLKKT 62
Query: 145 IPEIVAVESV 154
+P ++ VE V
Sbjct: 63 VPGVINVEKV 72
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQK----LR 220
+E ++ L++IRP L A GG +ELV ++ V VR+ G AG ++ + Q+ L+
Sbjct: 2 KEQVKAALDKIRPQL-QADGGDVELVDVENGNVSVRLKGACAGCPMSQITLKQRIEAYLK 60
Query: 221 EKIPAIAAVQ 230
+ +P + V+
Sbjct: 61 KTVPGVINVE 70
>gi|384106358|ref|ZP_10007265.1| nitrogen fixation protein [Rhodococcus imtechensis RKJ300]
gi|383833694|gb|EID73144.1| nitrogen fixation protein [Rhodococcus imtechensis RKJ300]
Length = 287
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+ + LD +RPYL S GG+V L + VVRL+L G+C SCPSS +T+++ ++ ++ P
Sbjct: 72 VATALDSVRPYLGSHGGDVELLGVVNGVVRLRLTGSCQSCPSSAVTLELAVKDAVLAAAP 131
Query: 147 EIVAVESVA 155
E V +E V
Sbjct: 132 ETVDIEVVG 140
>gi|110596893|ref|ZP_01385183.1| Nitrogen-fixing NifU-like [Chlorobium ferrooxidans DSM 13031]
gi|110341580|gb|EAT60040.1| Nitrogen-fixing NifU-like [Chlorobium ferrooxidans DSM 13031]
Length = 86
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLME 143
+ + + L+ +RPYL DGG+ L I + VV +KL GACGSCP S +T++ G+E+ + +
Sbjct: 16 DRVIAALETVRPYLQVDGGDCQLVGISKDMVVDVKLLGACGSCPMSTLTLRAGVEQAIKK 75
Query: 144 KIPEIVAVESV 154
PEIV VESV
Sbjct: 76 ANPEIVRVESV 86
>gi|322696539|gb|EFY88330.1| NifU-like protein [Metarhizium acridum CQMa 102]
Length = 297
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ D V+LKL+GAC +C SS +T+K GIE LM I E+ V
Sbjct: 211 IRPAIQEDGGDIEYRGFDDGYVKLKLRGACRTCDSSTVTLKNGIEGMLMHYIEEVKGVHQ 270
Query: 154 VADEETGLELNE 165
+ D+E + + E
Sbjct: 271 ILDQEEEIAMEE 282
>gi|156097428|ref|XP_001614747.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803621|gb|EDL45020.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 265
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 12/111 (10%)
Query: 75 DSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMK 134
D + LT EN+E VL+ IRP L D G+V L +I N + +KL G C +C S+ +T+
Sbjct: 73 DGGLHYDLTPENVEKVLNLIRPKLQIDNGDVELVDIKNNDLYIKLLGNCVTCSSNSVTVS 132
Query: 135 MGIERRLMEKIPEIVAVESVADEETGL------ELNEENIEKVLEEIRPYL 179
I++ L + + + +EE + E+NEENI L +++PY
Sbjct: 133 QVIKKTLK------MYIRNEKNEEPNVIITNFDEINEENIHSCLSDLKPYF 177
>gi|327402917|ref|YP_004343755.1| nitrogen-fixing NifU domain-containing protein [Fluviicola
taffensis DSM 16823]
gi|327318425|gb|AEA42917.1| nitrogen-fixing NifU domain-containing protein [Fluviicola
taffensis DSM 16823]
Length = 81
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 91 LDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV 149
L+E+RP+L++DGG++ L +I D +V+++L GAC C S+MT+K G+E + PEI+
Sbjct: 16 LNELRPHLVADGGDMELVDITDEGIVQVRLLGACSDCSMSMMTIKAGLEEAVKRVAPEII 75
Query: 150 AVESV 154
AVE+V
Sbjct: 76 AVEAV 80
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 6/64 (9%)
Query: 172 LEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAA----GVMTVRVAVTQKLREKIPAI 226
L E+RP+LV A GG +ELV I DE IV+VR+ G + +MT++ + + ++ P I
Sbjct: 16 LNELRPHLV-ADGGDMELVDITDEGIVQVRLLGACSDCSMSMMTIKAGLEEAVKRVAPEI 74
Query: 227 AAVQ 230
AV+
Sbjct: 75 IAVE 78
>gi|315225280|ref|ZP_07867097.1| nitrogen fixation protein NifU [Capnocytophaga ochracea F0287]
gi|420158598|ref|ZP_14665414.1| NifU-like protein [Capnocytophaga ochracea str. Holt 25]
gi|314944963|gb|EFS96995.1| nitrogen fixation protein NifU [Capnocytophaga ochracea F0287]
gi|394763414|gb|EJF45509.1| NifU-like protein [Capnocytophaga ochracea str. Holt 25]
Length = 79
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 91 LDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV 149
LD+IRPYL +DGG+++L +I DG +V+++L+G C +C + +T+K G+E + E +P+I
Sbjct: 14 LDKIRPYLQNDGGDISLVDIEDGKIVKVRLEGTCTNCSVNQLTLKSGVEMTIKEFVPQIE 73
Query: 150 AVESV 154
V SV
Sbjct: 74 KVISV 78
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 170 KVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVTQKLREKIP 224
K L++IRPYL GG + LV I D IVKVR+ G +T++ V ++E +P
Sbjct: 12 KALDKIRPYL-QNDGGDISLVDIEDGKIVKVRLEGTCTNCSVNQLTLKSGVEMTIKEFVP 70
Query: 225 AIAAV 229
I V
Sbjct: 71 QIEKV 75
>gi|426400752|ref|YP_007019724.1| nifU-like domain-containing protein [Candidatus Endolissoclinum
patella L2]
gi|425857420|gb|AFX98456.1| nifU-like domain protein [Candidatus Endolissoclinum patella L2]
Length = 192
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+I+ +LD +RP + DGG++ H + VV L + GAC CPSS T+KMGIE L
Sbjct: 116 HIKELLDARVRPAVSMDGGDIIFHGYENGVVTLTMHGACSGCPSSTATLKMGIENMLRHY 175
Query: 145 IPEI 148
IPE+
Sbjct: 176 IPEV 179
>gi|402493033|ref|ZP_10839789.1| Nitrogen-fixing NifU-like protein [Aquimarina agarilytica ZC1]
Length = 79
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEID-GNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
EN+E L+EIRP+L SDGG++ L +I+ G VR++LQGAC +C + MT++ G+E + +
Sbjct: 8 ENVEKALEEIRPFLKSDGGDIRLVDIEEGKRVRVELQGACVACSVNQMTLRSGVEMTIKK 67
Query: 144 KIPEI 148
P+I
Sbjct: 68 YAPQI 72
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 159 TGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDE-PIVKVRITGPAAGV----MTVRV 213
T EL +EN+EK LEEIRP+L + GG + LV I+E V+V + G MT+R
Sbjct: 2 TATEL-QENVEKALEEIRPFL-KSDGGDIRLVDIEEGKRVRVELQGACVACSVNQMTLRS 59
Query: 214 AVTQKLREKIPAIAAV 229
V +++ P I V
Sbjct: 60 GVEMTIKKYAPQIEEV 75
>gi|432341312|ref|ZP_19590674.1| nitrogen fixation protein [Rhodococcus wratislaviensis IFP 2016]
gi|430773664|gb|ELB89330.1| nitrogen fixation protein [Rhodococcus wratislaviensis IFP 2016]
Length = 278
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+ + LD +RPYL S GG+V L + VVRL+L G+C SCPSS +T+++ ++ ++ P
Sbjct: 63 VATALDSVRPYLGSHGGDVELLGVVNGVVRLRLTGSCQSCPSSAVTLELAVKDAVLAAAP 122
Query: 147 EIVAVESVA 155
E V +E V
Sbjct: 123 ETVDIEVVG 131
>gi|419964243|ref|ZP_14480201.1| nitrogen fixation protein [Rhodococcus opacus M213]
gi|414570323|gb|EKT81058.1| nitrogen fixation protein [Rhodococcus opacus M213]
Length = 318
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+ + LD +RPYL S GG+V L + VVRL+L G+C SCPSS +T+++ ++ ++ P
Sbjct: 103 VATALDSVRPYLGSHGGDVELLGVVNGVVRLRLTGSCQSCPSSAVTLELAVKDAVLAAAP 162
Query: 147 EIVAVESVA 155
E V +E V
Sbjct: 163 ETVDIEVVG 171
>gi|420148889|ref|ZP_14656077.1| NifU-like protein [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394754601|gb|EJF37953.1| NifU-like protein [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 79
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 91 LDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV 149
LD+IRPYL +DGG+++L +I DG +V+++L+G C +C + +T+K G+E + E +P+I
Sbjct: 14 LDKIRPYLQNDGGDISLVDIEDGKIVKVRLEGTCTNCSVNQLTLKSGVEMTIKEFVPQIE 73
Query: 150 AVESV 154
V SV
Sbjct: 74 KVISV 78
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 170 KVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVTQKLREKIP 224
K L++IRPYL GG + LV I D IVKVR+ G +T++ V ++E +P
Sbjct: 12 KALDKIRPYL-QNDGGDISLVDIEDGKIVKVRLEGTCTNCSVNQLTLKSGVEMTIKEFVP 70
Query: 225 AIAAV 229
I V
Sbjct: 71 QIEKV 75
>gi|256819880|ref|YP_003141159.1| nitrogen-fixing NifU domain-containing protein [Capnocytophaga
ochracea DSM 7271]
gi|393779542|ref|ZP_10367781.1| NifU-like protein [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|429756213|ref|ZP_19288819.1| NifU-like protein [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|256581463|gb|ACU92598.1| nitrogen-fixing NifU domain protein [Capnocytophaga ochracea DSM
7271]
gi|392609977|gb|EIW92770.1| NifU-like protein [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|429171701|gb|EKY13297.1| NifU-like protein [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 79
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 91 LDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV 149
LD+IRPYL +DGG+++L +I DG +V+++L+G C +C + +T+K G+E + E +P+I
Sbjct: 14 LDKIRPYLQNDGGDISLVDIEDGKIVKVRLEGTCTNCSVNQLTLKSGVEMTIKEFVPQIE 73
Query: 150 AVESV 154
V SV
Sbjct: 74 KVISV 78
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 162 ELNEENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVT 216
EL +E I K L++IRPYL GG + LV I D IVKVR+ G +T++ V
Sbjct: 5 ELKQEVI-KALDKIRPYL-QNDGGDISLVDIEDGKIVKVRLEGTCTNCSVNQLTLKSGVE 62
Query: 217 QKLREKIPAIAAV 229
++E +P I V
Sbjct: 63 MTIKEFVPQIEKV 75
>gi|383449702|ref|YP_005356423.1| hypothetical protein KQS_01870 [Flavobacterium indicum GPTSA100-9]
gi|380501324|emb|CCG52366.1| Protein of unknown function [Flavobacterium indicum GPTSA100-9]
Length = 298
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 80 LPLTAENIESVLDE-IRPYLISDGGNVALHEID--GNVVRLKLQGACGSCPSSVMTMKMG 136
L +T++ I ++L+E ++P + SDGGN+ + D N+V++ LQGAC CPSS T+K G
Sbjct: 218 LDVTSQQIINILEEYVKPAVQSDGGNITFNSYDEQANIVKVTLQGACSGCPSSTFTLKNG 277
Query: 137 IERRL 141
IE L
Sbjct: 278 IENML 282
>gi|118468815|ref|YP_887052.1| (Fe-S)-binding protein [Mycobacterium smegmatis str. MC2 155]
gi|441207646|ref|ZP_20973586.1| iron-sulfur cluster-binding , Rieske family protein [Mycobacterium
smegmatis MKD8]
gi|118170102|gb|ABK70998.1| iron-sulfur cluster-binding protein, Rieske family protein,
putative [Mycobacterium smegmatis str. MC2 155]
gi|440627829|gb|ELQ89634.1| iron-sulfur cluster-binding , Rieske family protein [Mycobacterium
smegmatis MKD8]
Length = 307
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI----DGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
I LD +RPYL S GG+V L ++ DG V RL+ G+C SCPSS T+++ I ++
Sbjct: 103 IADALDRVRPYLGSHGGDVRLLDVVPEADGAVARLRFSGSCKSCPSSAATLELAISDAVL 162
Query: 143 EKIPEIVAVESVADE 157
PE+ ++E V E
Sbjct: 163 AAAPEVSSIEVVNAE 177
>gi|424854477|ref|ZP_18278835.1| nitrogen-fixing NifU domain-containing protein [Rhodococcus opacus
PD630]
gi|356664524|gb|EHI44617.1| nitrogen-fixing NifU domain-containing protein [Rhodococcus opacus
PD630]
Length = 318
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+ + LD +RPYL S GG+V L + VVRL+L G+C SCPSS +T+++ ++ ++ P
Sbjct: 103 VATALDSVRPYLGSHGGDVELLGVVNGVVRLRLTGSCQSCPSSAVTLELAVKDAVLAAAP 162
Query: 147 EIVAVESVA 155
E V +E V
Sbjct: 163 ETVDIEVVG 171
>gi|229816700|ref|ZP_04446988.1| hypothetical protein COLINT_03748 [Collinsella intestinalis DSM
13280]
gi|229807752|gb|EEP43566.1| hypothetical protein COLINT_03748 [Collinsella intestinalis DSM
13280]
Length = 98
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
++ VL++IRP L +DGG++ + + VV+L+LQGAC CP S +T+ MG+ER L E +
Sbjct: 13 LKEVLEQIRPNLQADGGDMEYIGVTEDGVVKLELQGACAGCPMSSLTLSMGVERILKEHV 72
Query: 146 PEIVAVESVA 155
P + VE V
Sbjct: 73 PGVTRVEQVG 82
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAGV----MTVRVAVTQ 217
++E +++VLE+IRP L A GG +E + + E +VK+ + G AG +T+ + V +
Sbjct: 8 VDETLLKEVLEQIRPNLQ-ADGGDMEYIGVTEDGVVKLELQGACAGCPMSSLTLSMGVER 66
Query: 218 KLREKIPAIAAVQ 230
L+E +P + V+
Sbjct: 67 ILKEHVPGVTRVE 79
>gi|340517830|gb|EGR48073.1| predicted protein [Trichoderma reesei QM6a]
Length = 294
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + V LKL+GAC +C SS +T+K GIE LM I E+ V+
Sbjct: 205 IRPAIQEDGGDIEFRGFEDGQVLLKLRGACRTCDSSTVTLKNGIEGMLMHYIEEVKGVKQ 264
Query: 154 VADEETGLELNE-ENIEKVLEEIRPYLVGAAGGS 186
+ DEE + L E E+ L++ R GAA S
Sbjct: 265 ILDEEEEISLQEFAKFEEKLKQQR----GAAEAS 294
>gi|350537073|ref|NP_001232275.1| putative iron-sulfur cluster scaffold protein Nfu variant 3
[Taeniopygia guttata]
gi|197128017|gb|ACH44515.1| putative iron-sulfur cluster scaffold protein Nfu variant 3
[Taeniopygia guttata]
Length = 252
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 170 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVLLKLQGSCTSCPSSLITLKSGIQNMLQFYI 229
Query: 146 PEIVAVE 152
PE+ VE
Sbjct: 230 PEVEGVE 236
>gi|429851681|gb|ELA26859.1| NifU-like protein [Colletotrichum gloeosporioides Nara gc5]
Length = 312
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 94 IRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
IRP + DGG++ D VV LKL+GAC +C SS T+K GIE LM I E+ VE
Sbjct: 222 IRPAIQEDGGDIDFRGFTDEGVVLLKLRGACRTCDSSTATLKNGIESMLMHYIEEVKGVE 281
Query: 153 SVADEETGLELNE 165
+ DEE + L E
Sbjct: 282 QIMDEEEEVALKE 294
>gi|427407899|ref|ZP_18898101.1| hypothetical protein HMPREF9718_00575 [Sphingobium yanoikuyae ATCC
51230]
gi|425713862|gb|EKU76874.1| hypothetical protein HMPREF9718_00575 [Sphingobium yanoikuyae ATCC
51230]
Length = 192
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLD----EIRPYLISDGGN 104
H S + L AA +V A ++ + P AE ++ + D +RP + +DGG+
Sbjct: 86 HFSANMPLFAAGTAAGFSV---PAEEEAFTDDPEDAEIVDQIKDLIETRVRPAVANDGGD 142
Query: 105 VALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 154
+ D V L++QGAC CPSS T+K GIE+ L +PE+ V +V
Sbjct: 143 IIYRGFDKGTVYLRMQGACAGCPSSSATLKNGIEQLLKHYVPEVTEVRAV 192
>gi|443894112|dbj|GAC71462.1| nifu-like domain-containing proteins [Pseudozyma antarctica T-34]
Length = 291
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 87 IESVLD-EIRPYLISDGGNV---ALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
I+ +LD +RP + DGG++ E +V++KL+G+C C SS +T+K GIER L
Sbjct: 187 IKELLDTRVRPAIQEDGGDLEYRGFGEDTDGIVKVKLKGSCRGCDSSTVTLKSGIERMLK 246
Query: 143 EKIPEIVAVESVADEETGLELNE-ENIEKVLEEIR 176
IPE+ VE V D E + L+E +E+ LE+ R
Sbjct: 247 HYIPEVNGVEQVLDPEEEIALDEFAKLEQKLEKDR 281
>gi|302409492|ref|XP_003002580.1| HIRA-interacting protein [Verticillium albo-atrum VaMs.102]
gi|261358613|gb|EEY21041.1| HIRA-interacting protein [Verticillium albo-atrum VaMs.102]
Length = 292
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + VV LKL+GAC +C SS +T+K GIE LM I E+ +V
Sbjct: 203 IRPAIQEDGGDIEFRGFEDGVVLLKLRGACRTCDSSTVTLKNGIEGMLMHYIEEVKSVNQ 262
Query: 154 VADEETGLELNE 165
V D E + L E
Sbjct: 263 VMDPEEDIALEE 274
>gi|302335395|ref|YP_003800602.1| nitrogen-fixing NifU domain-containing protein [Olsenella uli DSM
7084]
gi|301319235|gb|ADK67722.1| nitrogen-fixing NifU domain protein [Olsenella uli DSM 7084]
Length = 85
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 81 PLTAENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIER 139
P+ E +E+ LD IR L +DGG+VAL D VV L++QGAC CP S + M GIER
Sbjct: 8 PINRELLEATLDVIRQSLQADGGDVALVGFNDEGVVTLEMQGACAGCPLSSLDMSEGIER 67
Query: 140 RLMEKIPEIVAVE 152
L E +P + VE
Sbjct: 68 ILKEHVPGVTKVE 80
>gi|226363961|ref|YP_002781743.1| hypothetical protein ROP_45510 [Rhodococcus opacus B4]
gi|226242450|dbj|BAH52798.1| hypothetical protein [Rhodococcus opacus B4]
Length = 278
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
+ + LD +RPYL S GG+V L + VVRL+L G+C SCPSS +T+++ ++ ++ P
Sbjct: 63 VATALDSVRPYLGSHGGDVELLGVVDGVVRLRLTGSCKSCPSSAVTLELAVKDAVLAAAP 122
Query: 147 EIVAVESVA 155
E V +E V
Sbjct: 123 ETVDIEVVG 131
>gi|405983718|ref|ZP_11042023.1| hypothetical protein HMPREF9451_01135 [Slackia piriformis YIT
12062]
gi|404388533|gb|EJZ83615.1| hypothetical protein HMPREF9451_01135 [Slackia piriformis YIT
12062]
Length = 76
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIE 138
+ + E + VLD IRP L +DGG+VAL ++ + VV ++LQGAC CP S MT+ G+E
Sbjct: 1 MAIDKEQVSRVLDLIRPSLQADGGDVALVDVQEDGVVVVELQGACKGCPMSQMTLANGVE 60
Query: 139 RRLMEKIPEIVAV 151
R L E +P + V
Sbjct: 61 RILKEHVPGVTKV 73
>gi|86141694|ref|ZP_01060218.1| nifU protein-like [Leeuwenhoekiella blandensis MED217]
gi|85831257|gb|EAQ49713.1| nifU protein-like [Leeuwenhoekiella blandensis MED217]
Length = 80
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
+E+ L+EIRP+L SDGG++AL I DG V+++L+GAC C + MT+K G+E + +
Sbjct: 10 VEAALEEIRPFLQSDGGDIALLSIEDGTTVKVQLEGACVGCSVNQMTLKSGVEMTIKKHA 69
Query: 146 PEI 148
P+I
Sbjct: 70 PQI 72
>gi|381199587|ref|ZP_09906734.1| Scaffold protein Nfu/NifU [Sphingobium yanoikuyae XLDN2-5]
Length = 192
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLD----EIRPYLISDGGN 104
H S + L AA +V A ++ + P AE ++ + D +RP + +DGG+
Sbjct: 86 HFSANMPLFAAGTAAGFSV---PAEEEAFTDDPEDAEIVDQIKDLIETRVRPAVANDGGD 142
Query: 105 VALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 154
+ D V L++QGAC CPSS T+K GIE+ L +PE+ V +V
Sbjct: 143 IIYRGFDKGTVYLRMQGACAGCPSSSATLKNGIEQLLKHYVPEVTEVRAV 192
>gi|18402817|ref|NP_566673.1| NifU-like protein 4 [Arabidopsis thaliana]
gi|75273382|sp|Q9LIG6.1|NIFU4_ARATH RecName: Full=NifU-like protein 4, mitochondrial; Short=AtNfu-III;
Short=AtNfu4; Flags: Precursor
gi|13899085|gb|AAK48964.1|AF370537_1 Unknown protein [Arabidopsis thaliana]
gi|9294004|dbj|BAB01907.1| unnamed protein product [Arabidopsis thaliana]
gi|18377516|gb|AAL66924.1| unknown protein [Arabidopsis thaliana]
gi|28207822|emb|CAD55561.1| NFU4 protein [Arabidopsis thaliana]
gi|332642927|gb|AEE76448.1| NifU-like protein 4 [Arabidopsis thaliana]
Length = 283
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLD-EIRPYLISDGGNVAL 107
+SS + L + + AA ++ A++ DS T I+ +L+ IRP + DGG++
Sbjct: 165 YSSGQPLFLDSQAAAAKDT--AISEDDSE-----TVAMIKELLETRIRPAVQDDGGDIEY 217
Query: 108 HEID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEE 158
D +V+L++QGAC CPSS +T+K GIE LM + E+ VE D E
Sbjct: 218 CGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVEQEFDGE 270
>gi|429769472|ref|ZP_19301581.1| NifU-like protein [Brevundimonas diminuta 470-4]
gi|429186993|gb|EKY27916.1| NifU-like protein [Brevundimonas diminuta 470-4]
Length = 195
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 72 ATPDSAIELPLTAENIESVLD-EIRPYLISDGGNVALHEID--GNVVRLKLQGACGSCPS 128
A+ D + + AE I+ +LD IRP + DGG++ D V+RL+++GAC CPS
Sbjct: 110 ASDDGTADSEIVAE-IKGLLDTRIRPAVAQDGGDILFDHFDEETGVLRLRMRGACAGCPS 168
Query: 129 SVMTMKMGIERRLMEKIPEIVAVESV 154
S T+K G+E+ + +PE+ +VE V
Sbjct: 169 SSATLKAGVEQMMRHYVPEVTSVEQV 194
>gi|89900651|ref|YP_523122.1| nitrogen-fixing NifU-like protein [Rhodoferax ferrireducens T118]
gi|89345388|gb|ABD69591.1| nitrogen-fixing NifU-like [Rhodoferax ferrireducens T118]
Length = 186
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
++IE +LD EIRPYL SDGG++ + + GN + + QGACG+CPS++ GIE RL
Sbjct: 117 DDIELILDQEIRPYLQSDGGDLHILGLAGNQLIVHYQGACGTCPSAISGTLQGIESRLRT 176
Query: 144 KIPEI 148
P+I
Sbjct: 177 LEPDI 181
>gi|198282994|ref|YP_002219315.1| Rieske (2Fe-2S) domain-containing protein [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|198247515|gb|ACH83108.1| Rieske (2Fe-2S) domain protein [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 301
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 81 PLTAENIESVLDEIRPYLISDGGNVALHEID-GNVVRLKLQGACGSCPSSVMTMKMGIER 139
P E IE+ LD +RP L GGNV L E+ + V L+L G+C CPSS +T+ G+E+
Sbjct: 96 PSLQERIEAALDSVRPGLEGHGGNVELVELRLPDTVILRLLGSCHGCPSSSLTLSDGVEK 155
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGA 182
+ + PEI +E+ + L E E+ I P+ +G
Sbjct: 156 AIRDACPEIRHIETAGRQYAATALTGEGSEQ---RISPFAIGG 195
>gi|218667970|ref|YP_002425198.1| iron-sulfur cluster-binding protein, Rieske family
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|415959765|ref|ZP_11557624.1| Rieske (2Fe-2S) domain-containing protein [Acidithiobacillus sp.
GGI-221]
gi|218520183|gb|ACK80769.1| iron-sulfur cluster-binding protein, Rieske family
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|339832622|gb|EGQ60525.1| Rieske (2Fe-2S) domain-containing protein [Acidithiobacillus sp.
GGI-221]
Length = 296
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 81 PLTAENIESVLDEIRPYLISDGGNVALHEID-GNVVRLKLQGACGSCPSSVMTMKMGIER 139
P E IE+ LD +RP L GGNV L E+ + V L+L G+C CPSS +T+ G+E+
Sbjct: 91 PSLQERIEAALDSVRPGLEGHGGNVELVELRLPDTVILRLLGSCHGCPSSSLTLSDGVEK 150
Query: 140 RLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGA 182
+ + PEI +E+ + L E E+ I P+ +G
Sbjct: 151 AIRDACPEIRHIETAGRQYAATALTGEGSEQ---RISPFAIGG 190
>gi|429754333|ref|ZP_19287066.1| NifU-like protein [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429169896|gb|EKY11623.1| NifU-like protein [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 77
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 91 LDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV 149
LD+IRPYL +DGG++ L +I DG +V+++L+G C +C + +T+K G+E + E +P+I
Sbjct: 12 LDKIRPYLQNDGGDITLVDIEDGKIVKVRLEGTCTNCSVNQITLKSGVEMTIKEYVPQIE 71
Query: 150 AVESV 154
V SV
Sbjct: 72 KVISV 76
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 162 ELNEENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVT 216
EL +E I K L++IRPYL GG + LV I D IVKVR+ G +T++ V
Sbjct: 3 ELKQEVI-KALDKIRPYL-QNDGGDITLVDIEDGKIVKVRLEGTCTNCSVNQITLKSGVE 60
Query: 217 QKLREKIPAIAAV 229
++E +P I V
Sbjct: 61 MTIKEYVPQIEKV 73
>gi|374320364|ref|YP_005073493.1| protein NifU [Paenibacillus terrae HPL-003]
gi|357199373|gb|AET57270.1| nifu [Paenibacillus terrae HPL-003]
Length = 79
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + VL ++RP+L+ DGG+ L E++ + +L+ GAC CPS+ +T+K IER ++E+
Sbjct: 9 DEVSEVLLKLRPFLLRDGGDAELVEVENGIAKLRFLGACNGCPSATITLKAAIERAILEE 68
Query: 145 IPEIVAVESV 154
I +I V V
Sbjct: 69 IEDIKEVVQV 78
>gi|359776625|ref|ZP_09279932.1| hypothetical protein ARGLB_047_01110 [Arthrobacter globiformis NBRC
12137]
gi|359306164|dbj|GAB13761.1| hypothetical protein ARGLB_047_01110 [Arthrobacter globiformis NBRC
12137]
Length = 362
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+ + LD +RPYL S GG+V L I DG VVRLKL G C CPSS +T+K +E +
Sbjct: 93 VAAALDSVRPYLGSHGGDVELEGISPDG-VVRLKLLGTCQGCPSSSVTLKYAVEEAIQNA 151
Query: 145 IPEIVAVESVADEE 158
PE+ A++ V E+
Sbjct: 152 APEVTAIDVVEAEK 165
>gi|431796891|ref|YP_007223795.1| thioredoxin-like protein [Echinicola vietnamensis DSM 17526]
gi|430787656|gb|AGA77785.1| thioredoxin-like protein [Echinicola vietnamensis DSM 17526]
Length = 194
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 81 PLTAEN-------IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMT 132
PL EN I+ +LDE IRP + DGG + H VV++ LQGAC CPSS +T
Sbjct: 110 PLFDENDSEVVKKIKGILDEYIRPAVEQDGGAIIFHSFQDGVVKVLLQGACSGCPSSTVT 169
Query: 133 MKMGIERRLMEKIPEIV 149
+K GIE L +P+ V
Sbjct: 170 LKAGIENLLTRMLPDDV 186
>gi|346972175|gb|EGY15627.1| HIRA-interacting protein [Verticillium dahliae VdLs.17]
Length = 292
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + VV LKL+GAC +C SS +T+K GIE LM I E+ +V
Sbjct: 203 IRPAIQEDGGDIEFRGFEDGVVLLKLRGACRTCDSSTVTLKNGIEGMLMHYIEEVKSVNQ 262
Query: 154 VADEETGLELNE 165
V D E + L E
Sbjct: 263 VMDPEEDIALEE 274
>gi|341038530|gb|EGS23522.1| nifu-like protein [Chaetomium thermophilum var. thermophilum DSM
1495]
Length = 326
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
+RP + DGG++ V LKL+GAC +C SS +T+K GIE LM I E+ V
Sbjct: 230 VRPAIQEDGGDIEFRGFKDGYVHLKLRGACRTCDSSTVTLKNGIEGMLMHYIEEVKGVVQ 289
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V DEE + L E +K E++R
Sbjct: 290 VLDEEEEIALRE--FQKFEEKLR 310
>gi|89889561|ref|ZP_01201072.1| thioredoxin containing NifU domain [Flavobacteria bacterium BBFL7]
gi|89517834|gb|EAS20490.1| thioredoxin containing NifU domain [Flavobacteria bacterium BBFL7]
Length = 214
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 11/79 (13%)
Query: 78 IELPLTAENIESV-------LDE-IRPYLISDGGNVALHEIDGNV--VRLKLQGACGSCP 127
IELP EN++ V LDE I+P + SDGGN+ D N V++ LQGAC CP
Sbjct: 126 IELP-KFENLDDVSKKVVEILDEYIKPAVASDGGNIVFDSYDENTKEVKVILQGACSGCP 184
Query: 128 SSVMTMKMGIERRLMEKIP 146
SS MT+K GIE L + +P
Sbjct: 185 SSTMTLKSGIETMLRDMLP 203
>gi|85709112|ref|ZP_01040178.1| possible NifU-like domain protein [Erythrobacter sp. NAP1]
gi|85690646|gb|EAQ30649.1| possible NifU-like domain protein [Erythrobacter sp. NAP1]
Length = 193
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
+RP + DGG++A VV L LQGAC CPSS T+K GIE L +PE+V V
Sbjct: 133 VRPAVAGDGGDIAYRGFSDGVVYLTLQGACAGCPSSTATLKHGIESLLKHYVPEVVEV 190
>gi|307108001|gb|EFN56242.1| hypothetical protein CHLNCDRAFT_48753 [Chlorella variabilis]
Length = 209
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 94 IRPYLISDGGNVALHEID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
IRP + DGG++ D VV+LK+ GAC CPSS +T+K GIE LM IPE+ V
Sbjct: 125 IRPAVQEDGGDIVFRTWDPESGVVKLKMMGACSGCPSSAVTLKSGIENMLMHYIPEVRGV 184
Query: 152 ESVADEE 158
E +E
Sbjct: 185 EEAEPDE 191
>gi|378733030|gb|EHY59489.1| thioredoxin-like protein [Exophiala dermatitidis NIH/UT8656]
Length = 315
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ V LKL+GAC +C SS +T+K GIE LM I E+ V
Sbjct: 214 IRPAIQEDGGDIEFRGFHDGQVLLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVKGVTQ 273
Query: 154 VADEETGLELNE--ENIEKVLEEIRPYLVGA--AGGSLELV 190
V DEE + L E + EK+ ++ P V + GSL+ V
Sbjct: 274 VMDEEEEIALKEFAKFEEKLRQQKGPDAVASTVGKGSLDYV 314
>gi|452946749|gb|EME52243.1| fe-s cluster assembly nifu-like protein [Amycolatopsis decaplanina
DSM 44594]
Length = 293
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ LD +RPYL S G V +DG+ V RL+L+G C CPSS +T+KM IE + +
Sbjct: 85 IQRALDRVRPYLGSHAGGVEYLGVDGDGVARLRLEGNCQGCPSSSLTVKMAIEGAIEQAA 144
Query: 146 PEIVAVE 152
PEI VE
Sbjct: 145 PEITGVE 151
>gi|342883372|gb|EGU83885.1| hypothetical protein FOXB_05599 [Fusarium oxysporum Fo5176]
Length = 316
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 94 IRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVE 152
IRP + DGG++ D V L+L+GAC +C SS +T+K GIE LM I E+ V+
Sbjct: 225 IRPAIQEDGGDIDFRGFDDEGYVHLRLRGACRTCDSSTVTLKNGIEGMLMHYIEEVKGVK 284
Query: 153 SVADEETGLELNEENIEKVLEEIR 176
V D+E + L E EK E++R
Sbjct: 285 QVMDQEEEIALQE--FEKFEEKLR 306
>gi|224373701|ref|YP_002608073.1| NifU family protein [Nautilia profundicola AmH]
gi|223588484|gb|ACM92220.1| NifU family protein [Nautilia profundicola AmH]
Length = 98
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Query: 79 ELPLTAENIE----SVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMK 134
E+P + E+++ VLDE+RP L DGG+V L ++ +V ++LQG C C S+ T+K
Sbjct: 3 EIPFSNEDLKEAVAGVLDEVRPMLQMDGGDVTLIDVRKPIVFVQLQGGCVGCASAGATLK 62
Query: 135 MGIERRLMEKI-PEIVAV 151
GIE+ L EKI PE+V +
Sbjct: 63 YGIEKALKEKIHPELVVM 80
>gi|305666181|ref|YP_003862468.1| Nitrogen-fixing NifU-like protein [Maribacter sp. HTCC2170]
gi|88707679|gb|EAQ99920.1| Nitrogen-fixing NifU-like protein [Maribacter sp. HTCC2170]
Length = 79
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 86 NIESVLDEIRPYLISDGGNVALHEIDGNV-VRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
N+E L+EIRP+L SDGG++ L ID + V++KLQGAC C + MT+K G+E + +
Sbjct: 9 NVEKALEEIRPFLQSDGGDIELVSIDNDSSVKVKLQGACVGCSVNQMTLKSGVEMTIKKY 68
Query: 145 IPEI 148
P+I
Sbjct: 69 APQI 72
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 167 NIEKVLEEIRPYLVGAAGGSLELVTID-EPIVKVRITGPAAGV----MTVRVAVTQKLRE 221
N+EK LEEIRP+L + GG +ELV+ID + VKV++ G G MT++ V +++
Sbjct: 9 NVEKALEEIRPFL-QSDGGDIELVSIDNDSSVKVKLQGACVGCSVNQMTLKSGVEMTIKK 67
Query: 222 KIPAIAAV 229
P I V
Sbjct: 68 YAPQIEEV 75
>gi|402820017|ref|ZP_10869584.1| hypothetical protein IMCC14465_08180 [alpha proteobacterium
IMCC14465]
gi|402510760|gb|EJW21022.1| hypothetical protein IMCC14465_08180 [alpha proteobacterium
IMCC14465]
Length = 193
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 86 NIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
I+ +LD +RP + DGG++ H + VV L ++GAC CPSS T+K GIE L
Sbjct: 122 TIKQLLDTRVRPAVAQDGGDIVFHGYEEGVVSLTMRGACAGCPSSTATLKHGIENLLKHF 181
Query: 145 IPEIVAV 151
IPEI V
Sbjct: 182 IPEITEV 188
>gi|429747864|ref|ZP_19281106.1| NifU-like protein [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429162245|gb|EKY04581.1| NifU-like protein [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 79
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 91 LDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIV 149
LD+IRPYL +DGG+++L +I DG +V+++L+G C +C + +T+K G+E + E +P+I
Sbjct: 14 LDKIRPYLQNDGGDISLVDIEDGKIVKVRLEGTCTNCSVNQVTLKSGVEMTIKEFVPQIE 73
Query: 150 AVESV 154
V SV
Sbjct: 74 KVISV 78
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 162 ELNEENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAVT 216
EL +E I K L++IRPYL GG + LV I D IVKVR+ G +T++ V
Sbjct: 5 ELKQEVI-KALDKIRPYL-QNDGGDISLVDIEDGKIVKVRLEGTCTNCSVNQVTLKSGVE 62
Query: 217 QKLREKIPAIAAV 229
++E +P I V
Sbjct: 63 MTIKEFVPQIEKV 75
>gi|399987065|ref|YP_006567414.1| nitrogen-fixing NifU-like protein [Mycobacterium smegmatis str. MC2
155]
gi|399231626|gb|AFP39119.1| Nitrogen-fixing NifU-like protein [Mycobacterium smegmatis str. MC2
155]
Length = 214
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI----DGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
I LD +RPYL S GG+V L ++ DG V RL+ G+C SCPSS T+++ I ++
Sbjct: 10 IADALDRVRPYLGSHGGDVRLLDVVPEADGAVARLRFSGSCKSCPSSAATLELAISDAVL 69
Query: 143 EKIPEIVAVESVADE 157
PE+ ++E V E
Sbjct: 70 AAAPEVSSIEVVNAE 84
>gi|156044806|ref|XP_001588959.1| hypothetical protein SS1G_10507 [Sclerotinia sclerotiorum 1980]
gi|154694895|gb|EDN94633.1| hypothetical protein SS1G_10507 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 372
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + +V+LKL+GAC +C SS +T+K GIE LM I E+ V
Sbjct: 216 IRPAIQEDGGDIDYRGFEDGMVKLKLRGACRTCDSSTVTLKNGIEGMLMHYIEEVKGVVQ 275
Query: 154 VADEETGLELNEENIEKVLEEIR 176
V DEE + + E K E++R
Sbjct: 276 VMDEEEEIAIQE--FAKFEEKLR 296
>gi|358378221|gb|EHK15903.1| hypothetical protein TRIVIDRAFT_65266 [Trichoderma virens Gv29-8]
Length = 289
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + DGG++ + V LKL+GAC +C SS +T+K GIE LM I E+ V+
Sbjct: 200 IRPAIQEDGGDIEFRGFEDGQVLLKLRGACRTCDSSTVTLKNGIEGMLMHYIEEVQGVKQ 259
Query: 154 VADEETGLELNE 165
+ DEE + L E
Sbjct: 260 ILDEEEEISLQE 271
>gi|163868796|ref|YP_001610020.1| NifU-like protein [Bartonella tribocorum CIP 105476]
gi|161018467|emb|CAK02025.1| NifU-related protein [Bartonella tribocorum CIP 105476]
Length = 192
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + +DGG++ + +V L ++GAC CPSS T+K GIE L IPE++ VE+
Sbjct: 130 IRPAVANDGGDITFRGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHFIPEVLGVEA 189
Query: 154 V 154
+
Sbjct: 190 M 190
>gi|269216053|ref|ZP_06159907.1| NifU family protein [Slackia exigua ATCC 700122]
gi|402828510|ref|ZP_10877397.1| NifU-like protein [Slackia sp. CM382]
gi|269130312|gb|EEZ61390.1| NifU family protein [Slackia exigua ATCC 700122]
gi|402286318|gb|EJU34793.1| NifU-like protein [Slackia sp. CM382]
Length = 76
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIE 138
+ + + + VLD +RP L +DGG++ L +I D +VR++LQGAC C S +T+ G+E
Sbjct: 1 MEIDKKRVSRVLDMVRPSLQADGGDLELVDITDDGIVRVRLQGACNGCALSSLTIANGVE 60
Query: 139 RRLMEKIPEIVAVESV 154
R L E +PE+ V S+
Sbjct: 61 RILKEHVPEVAKVISI 76
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 161 LELNEENIEKVLEEIRPYLVGAAGGSLELVTI-DEPIVKVRITGPAAGV----MTVRVAV 215
+E++++ + +VL+ +RP L A GG LELV I D+ IV+VR+ G G +T+ V
Sbjct: 1 MEIDKKRVSRVLDMVRPSL-QADGGDLELVDITDDGIVRVRLQGACNGCALSSLTIANGV 59
Query: 216 TQKLREKIPAIAAV 229
+ L+E +P +A V
Sbjct: 60 ERILKEHVPEVAKV 73
>gi|307215410|gb|EFN90079.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Harpegnathos saltator]
Length = 265
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ E +V+LK+QG+C +CPSSV+T++ G++ + I
Sbjct: 172 IKELLDTRIRPTVQEDGGDIGFEE---GIVKLKMQGSCTNCPSSVVTLRNGVQNMMQFYI 228
Query: 146 PEIVAVESVADE 157
PE++ + V DE
Sbjct: 229 PEVLGIIQVEDE 240
>gi|395790363|ref|ZP_10469853.1| hypothetical protein ME9_01570 [Bartonella taylorii 8TBB]
gi|395426234|gb|EJF92362.1| hypothetical protein ME9_01570 [Bartonella taylorii 8TBB]
Length = 192
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
IRP + +DGG++ + +V L ++GAC CPSS T+K GIE L IPE++ VE+
Sbjct: 130 IRPAVANDGGDITFRGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHFIPEVLGVEA 189
Query: 154 V 154
+
Sbjct: 190 M 190
>gi|385800463|ref|YP_005836867.1| nitrogen-fixing NifU domain-containing protein [Halanaerobium
praevalens DSM 2228]
gi|309389827|gb|ADO77707.1| nitrogen-fixing NifU domain protein [Halanaerobium praevalens DSM
2228]
Length = 73
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLME 143
E ++ +D+IRP L +DGG+V L E+ + +V++KL GAC CP S +T+K GIE+ L +
Sbjct: 3 EEVQKYIDKIRPSLQADGGDVELIEVTEAGIVKVKLLGACSGCPMSTLTIKNGIEKTLKQ 62
Query: 144 KIPEIVAVESV 154
+ + V+SV
Sbjct: 63 NVEGVKEVQSV 73
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAG----VMTVRVAVTQKL 219
+E ++K +++IRP L A GG +EL+ + E IVKV++ G +G +T++ + + L
Sbjct: 2 KEEVQKYIDKIRPSL-QADGGDVELIEVTEAGIVKVKLLGACSGCPMSTLTIKNGIEKTL 60
Query: 220 REKIPAIAAVQ 230
++ + + VQ
Sbjct: 61 KQNVEGVKEVQ 71
>gi|449550288|gb|EMD41252.1| hypothetical protein CERSUDRAFT_78915 [Ceriporiopsis subvermispora
B]
Length = 226
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 83 TAENIESVLD-EIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERR 140
T I+ +LD +RP + DGG++ D +V+L L+G+C C SS +T+K GIER
Sbjct: 116 TVAMIKELLDTRVRPAIQEDGGDIEYRGFTDEGIVQLMLKGSCRGCDSSTVTLKSGIERM 175
Query: 141 LMEKIPEIVAVESVADEETGLELNE-ENIEKVLE 173
L IPE+ VE V EE + L+E + +E+ L+
Sbjct: 176 LTHYIPEVKGVEQVLGEEEAIALDEFQKLEQRLQ 209
>gi|296282499|ref|ZP_06860497.1| hypothetical protein CbatJ_02705 [Citromicrobium bathyomarinum
JL354]
Length = 192
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
IRP + DGG++A VV L+LQGAC CPSS T+K GIE L +PE+V V
Sbjct: 132 IRPAVAGDGGDIAYRGYRDGVVHLQLQGACDGCPSSTATLKHGIEGLLKHYVPEVVEV 189
>gi|67633331|gb|AAY78582.1| predicted thioredoxin-like protein [uncultured bacterium
MedeBAC82F10]
Length = 185
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD ++RP + DGG++ + + +V L++QGAC CPSS T+KMGIE L I
Sbjct: 115 IKELLDTKVRPAVAMDGGDIIFDKYNEGIVFLQMQGACQGCPSSTATLKMGIENMLKHYI 174
Query: 146 PEIVAVESV 154
PE+ V V
Sbjct: 175 PEVREVRPV 183
>gi|163784585|ref|ZP_02179431.1| nifU-like domain protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159880146|gb|EDP73804.1| nifU-like domain protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 89
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Query: 87 IESVLDEIRPYLISDGGNVALHEI--DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEK 144
+E VL++IRP L DGG+V L +I DG V ++L GAC C S+MT+K GIE+RL ++
Sbjct: 14 VEEVLEKIRPALRFDGGDVELVDIGEDGTVY-VRLMGACSGCAMSLMTLKGGIEQRLKQE 72
Query: 145 IPEIVAVESV 154
IPE+ V +V
Sbjct: 73 IPEVKEVVAV 82
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 163 LNEENIEKVLEEIRPYLVGAAGGSLELVTIDEP-IVKVRITGPAAG----VMTVRVAVTQ 217
++ +E+VLE+IRP L GG +ELV I E V VR+ G +G +MT++ + Q
Sbjct: 9 IDRAKVEEVLEKIRPALR-FDGGDVELVDIGEDGTVYVRLMGACSGCAMSLMTLKGGIEQ 67
Query: 218 KLREKIPAIAAV 229
+L+++IP + V
Sbjct: 68 RLKQEIPEVKEV 79
>gi|86607917|ref|YP_476679.1| Fe-S cluster assembly protein NifU [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556459|gb|ABD01416.1| Fe-S cluster assembly protein NifU [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 312
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I++VL+E +RP L++DGG+V L++++G+ V ++L+G+C +CPS T+++ IE RL E++
Sbjct: 244 IQAVLEEEVRPLLLADGGDVELYDLEGDQVWVRLKGSCTTCPSQQNTLRLLIETRLQEQV 303
Query: 146 PEIVAVESV 154
+ V ++
Sbjct: 304 WPTLTVHAL 312
>gi|121601928|ref|YP_989428.1| NifU family protein [Bartonella bacilliformis KC583]
gi|421761234|ref|ZP_16198037.1| NifU family protein [Bartonella bacilliformis INS]
gi|120614105|gb|ABM44706.1| NifU family protein [Bartonella bacilliformis KC583]
gi|411173018|gb|EKS43066.1| NifU family protein [Bartonella bacilliformis INS]
Length = 192
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 94 IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVES 153
+RP + +DGG++ + +V L ++GAC CPSS T+K GIE L IPE+V VE+
Sbjct: 130 VRPAVANDGGDITFRGFEHGIVYLNMRGACAGCPSSTATLKHGIENLLRHFIPEVVGVEA 189
Query: 154 V 154
+
Sbjct: 190 M 190
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,320,607,482
Number of Sequences: 23463169
Number of extensions: 125223329
Number of successful extensions: 500086
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2276
Number of HSP's successfully gapped in prelim test: 567
Number of HSP's that attempted gapping in prelim test: 495225
Number of HSP's gapped (non-prelim): 3924
length of query: 232
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 94
effective length of database: 9,121,278,045
effective search space: 857400136230
effective search space used: 857400136230
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)