BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026830
(232 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93W20|NIFU2_ARATH NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2
PE=1 SV=1
Length = 235
Score = 296 bits (758), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 162/236 (68%), Positives = 186/236 (78%), Gaps = 5/236 (2%)
Query: 1 MQGVVLNPS-YSR-PHQTLDSPSCSRPASKSTKSFFGERVS--LTRWRNPVCHSSCRLLL 56
MQ + LNP+ SR P Q +D S S + +R + R NP+ R L
Sbjct: 1 MQLLTLNPAAISRTPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLS 60
Query: 57 IRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVR 116
R+ R V+KAVATPD +E+PLT EN+ESVLDEIRPYL+SDGGNVALHEIDGN+VR
Sbjct: 61 SRQL-FRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVR 119
Query: 117 LKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIR 176
+KLQGACGSCPSS MTMKMGIERRLMEKIPEIVAVE++ DEETGLELNEENIEKVLEEIR
Sbjct: 120 VKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIR 179
Query: 177 PYLVGAAGGSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
PYL+G A GSL+LV I++PIVK+RITGPAAGVMTVRVAVTQKLREKIP+IAAVQL+
Sbjct: 180 PYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQLI 235
>sp|Q84LK7|NIFU1_ORYSJ NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica
GN=NIFU1 PE=1 SV=1
Length = 226
Score = 240 bits (613), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/168 (70%), Positives = 143/168 (85%), Gaps = 2/168 (1%)
Query: 67 VIKAVA--TPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACG 124
V+ A+A P +A++LPLTA N+ESVLD++RPYL +DGG+VALHEI GNVVRLKLQGACG
Sbjct: 58 VVGAIAGLDPVTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACG 117
Query: 125 SCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAG 184
SCPSS++T+K GIERRLMEKIP++ AVE V D+ETGLELNEEN+EKVL EIRPYL G G
Sbjct: 118 SCPSSLITIKRGIERRLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGG 177
Query: 185 GSLELVTIDEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
G L+ + I PIVKVR+TGPAA V TVR+AV++KLREKIP+I VQLL
Sbjct: 178 GGLQFLMIKGPIVKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIVQLL 225
>sp|Q84RQ7|NIFU3_ARATH NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3
PE=2 SV=1
Length = 236
Score = 230 bits (586), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/154 (74%), Positives = 131/154 (85%), Gaps = 1/154 (0%)
Query: 80 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIER 139
+PLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE
Sbjct: 82 MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIES 141
Query: 140 RLMEKIPEIVAVESVADEET-GLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVK 198
RL +KIPEI++VE + ET GLELN+ENIEKVL E+RPYL G GG LELV ID +VK
Sbjct: 142 RLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVK 201
Query: 199 VRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL 232
VR+TGPAAGVMTVRVA+TQKLRE IP+I AVQLL
Sbjct: 202 VRLTGPAAGVMTVRVALTQKLRETIPSIGAVQLL 235
>sp|Q93W77|NIFU1_ARATH NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1
PE=1 SV=1
Length = 231
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 92/147 (62%), Gaps = 3/147 (2%)
Query: 76 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKM 135
SA LT +N++ VL+++RP+LISDGGNV + ++ VV LKLQGAC SCPSS TM M
Sbjct: 79 SAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTM 138
Query: 136 GIERRLMEKIPEIVA-VESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVTIDE 194
GIER L EK + + + V DEE ++ E + L+ +RP + GGS+E+++++
Sbjct: 139 GIERVLKEKFGDALKDIRQVFDEEVK-QITVEAVNAHLDILRP-AIKNYGGSVEVLSVEG 196
Query: 195 PIVKVRITGPAAGVMTVRVAVTQKLRE 221
V+ GP + M ++ A+ +K ++
Sbjct: 197 EDCVVKYVGPESIGMGIQAAIKEKFKD 223
>sp|P33179|NIFU_ANASL Nitrogen fixation protein NifU (Fragment) OS=Anabaena sp. (strain
L31) GN=nifU PE=3 SV=1
Length = 112
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSCPSS T+K+ IE RL ++I
Sbjct: 44 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRI 103
Query: 146 PEIVAVESV 154
+ VE+V
Sbjct: 104 NPSLVVEAV 112
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 168 IEKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGPA----AGVMTVRVAVTQKLREK 222
I+KVL EE+RP L+ A GG +EL +D IVKV + G + T+++A+ +LR++
Sbjct: 44 IQKVLDEEVRPVLI-ADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDR 102
Query: 223 I 223
I
Sbjct: 103 I 103
>sp|Q43885|NIFU_TRIAZ Nitrogen fixation protein NifU OS=Trichormus azollae GN=nifU PE=3
SV=1
Length = 300
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 5/86 (5%)
Query: 74 PDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPS 128
P+S + PLT I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC S
Sbjct: 215 PNSGQKRPLTNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSS 274
Query: 129 SVMTMKMGIERRLMEKIPEIVAVESV 154
S T+K+ IE RL ++I + VE+V
Sbjct: 275 STATLKIAIESRLRDRINPSLVVEAV 300
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Query: 168 IEKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREK 222
I+KVL EE+RP L+ A GG +EL +D IVKV + G ++ T+++A+ +LR++
Sbjct: 232 IQKVLDEEVRPVLI-ADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDR 290
Query: 223 I 223
I
Sbjct: 291 I 291
>sp|P20628|NIFU_NOSS1 Nitrogen fixation protein NifU OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=nifU PE=3 SV=1
Length = 300
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 5/86 (5%)
Query: 74 PDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPS 128
P+S + PLT I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC S
Sbjct: 215 PNSGQKRPLTNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSS 274
Query: 129 SVMTMKMGIERRLMEKIPEIVAVESV 154
S T+K+ IE RL ++I + VE+V
Sbjct: 275 STATLKIAIESRLRDRINPSLVVEAV 300
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Query: 168 IEKVL-EEIRPYLVGAAGGSLELVTIDEPIVKVRITGP----AAGVMTVRVAVTQKLREK 222
I+KVL EE+RP L+ A GG +EL +D IVKV + G ++ T+++A+ +LR++
Sbjct: 232 IQKVLDEEVRPVLI-ADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDR 290
Query: 223 I 223
I
Sbjct: 291 I 291
>sp|Q8SY96|NFU1_DROME NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila melanogaster GN=CG32500 PE=2 SV=1
Length = 283
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 7/97 (7%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ +G VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 146 PEIVAVESVADE-----ETGLELNEENIEKVLEEIRP 177
PE+ +VE V DE E+ E E+N+ K L++ P
Sbjct: 242 PEVESVEQVFDEADRMIESEFERFEKNL-KTLKQQEP 277
>sp|O32119|YUTI_BACSU Putative nitrogen fixation protein YutI OS=Bacillus subtilis
(strain 168) GN=yutI PE=3 SV=1
Length = 111
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 46/58 (79%)
Query: 85 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E ++ VLD++RP+L+ DGG+ L ++D +V+L+L GACGSCPSS +T+K GIER L+
Sbjct: 41 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALL 98
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 165 EENIEKVLEEIRPYLVGAAGGSLELVTIDEPIVKVRITGPAA 206
+E +++VL+++RP+L+ GG ELV +DE IVK+R+ G
Sbjct: 40 KEQVQEVLDKLRPFLL-RDGGDCELVDVDEGIVKLRLLGACG 80
>sp|B4NE93|NFU1_DROWI NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila willistoni GN=GK25604 PE=3 SV=1
Length = 289
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ D VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 183 IKELLDTRIRPTVQEDGGDIVFMSYDNGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 242
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVLEE 174
PE+ +VE V DE + E E E+ L++
Sbjct: 243 PEVESVEQVFDEADKMADKEFERFERNLKQ 272
>sp|B4H303|NFU1_DROPE NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila persimilis GN=GL13432 PE=3 SV=1
Length = 282
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 178 IKELLDTRIRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 237
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVLEEIRP--YLVGAAGG 185
PE+ +VE V D+ + E E EK L++ P VG GG
Sbjct: 238 PEVESVEQVFDDADRMADKEFERFEKNLKQKEPAGAPVGIGGG 280
>sp|B5DKJ8|NFU1_DROPS NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila pseudoobscura pseudoobscura GN=GA22888
PE=3 SV=1
Length = 286
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVLEEIRP--YLVGAAGG 185
PE+ +VE V D+ + E E EK L++ P VG GG
Sbjct: 242 PEVESVEQVFDDVDRMADKEFERFEKNLKQKEPAGAPVGIGGG 284
>sp|B4PZ52|NFU1_DROYA NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila yakuba GN=GE15286 PE=3 SV=1
Length = 283
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 7/97 (7%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 146 PEIVAVESVADE-----ETGLELNEENIEKVLEEIRP 177
PE+ +VE V DE ++ E E+N+ K L++ P
Sbjct: 242 PEVESVEQVFDEADRMVDSEFERFEKNL-KTLKQQEP 277
>sp|B3NYF7|NFU1_DROER NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila erecta GN=GG17526 PE=3 SV=1
Length = 283
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 7/101 (6%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 146 PEIVAVESVADE-----ETGLELNEENIEKVLEEIRPYLVG 181
PE+ +VE V DE ++ E E+N+ K L++ P G
Sbjct: 242 PEVESVEQVFDEADRMIDSEFERFEKNL-KTLKQQEPSGAG 281
>sp|B4R3T1|NFU1_DROSI NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila simulans GN=GD15490 PE=3 SV=1
Length = 283
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVLEEIRPYLVGAAGG 185
PE+ +VE V DE + +E E EK L+ ++ G +GG
Sbjct: 242 PEVESVEQVFDEADRMIDSEFERFEKNLKTLKQQ--GPSGG 280
>sp|Q9UMS0|NFU1_HUMAN NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Homo
sapiens GN=NFU1 PE=1 SV=2
Length = 254
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +V+LKLQG+C SCPSS++T+K GI+ L I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYI 232
Query: 146 PEIVAVESVADEET 159
PE+ VE V D+E+
Sbjct: 233 PEVEGVEQVMDDES 246
>sp|Q9QZ23|NFU1_MOUSE NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Mus
musculus GN=Nfu1 PE=1 SV=2
Length = 255
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG+V + +VRLKLQG+C SCPSS++T+K GI+ L I
Sbjct: 173 IKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYI 232
Query: 146 PEIVAVESVADEE 158
PE+ VE V D++
Sbjct: 233 PEVEGVEQVMDDD 245
>sp|B4IMF6|NFU1_DROSE NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila sechellia GN=GM13534 PE=3 SV=1
Length = 283
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 7/97 (7%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 146 PEIVAVESVADE-----ETGLELNEENIEKVLEEIRP 177
PE+ +VE V DE ++ E E+N+ K L++ P
Sbjct: 242 PEVESVEQVFDEADRMIDSEFERFEKNL-KTLKQQEP 277
>sp|B4JWR9|NFU1_DROGR NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila grimshawi GN=GH17809 PE=3 SV=1
Length = 298
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 194 IKELLDTRIRPTVQEDGGDIVFISYEKGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 253
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVLEE 174
PE+ +VE V DE + +E E EK L++
Sbjct: 254 PEVESVEQVFDEVDKVANSEFERFEKSLKQ 283
>sp|B4M375|NFU1_DROVI NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila virilis GN=GJ19011 PE=3 SV=1
Length = 298
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + +V+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 190 IKELLDTRIRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 249
Query: 146 PEIVAVESVADEETGLELNE-ENIEKVL 172
PE+ +VE V D+ + E E EK L
Sbjct: 250 PEVESVEQVFDDADKMANKEFERFEKSL 277
>sp|Q00241|NIFU_PLEBO Nitrogen fixation protein NifU (Fragment) OS=Plectonema boryanum
GN=nifU PE=3 SV=1
Length = 205
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 87 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ VLDE +RP LI+DGG+V L+++DG+ V++ L+GACGSC SS T+K +E +L ++
Sbjct: 137 IQKVLDEEVRPVLIADGGDVELYDVDGDFVKVTLKGACGSCASSTATLKDAVEAKLRLRV 196
Query: 146 PEIVAVESV 154
+ V++V
Sbjct: 197 LPTLVVQAV 205
Score = 38.5 bits (88), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 34/156 (21%)
Query: 93 EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSC-------PSSVMTMKMGIERRLMEKI 145
+IR +I +G L ++ +K G CGSC ++V+ K R+ +I
Sbjct: 64 KIRRVVIENG----LTTVEQVTSYVKAGGGCGSCLADIEDIITAVIDEKETTAARIAAEI 119
Query: 146 PE------IVAVESVADEETGLELNEENIEKVL-EEIRPYLVGAAGGSLELVTIDEPIVK 198
E + V+ +A I+KVL EE+RP L+ A GG +EL +D VK
Sbjct: 120 SEAQIRKPLTNVQKIA-----------LIQKVLDEEVRPVLI-ADGGDVELYDVDGDFVK 167
Query: 199 VRITGP----AAGVMTVRVAVTQKLREKIPAIAAVQ 230
V + G A+ T++ AV KLR ++ VQ
Sbjct: 168 VTLKGACGSCASSTATLKDAVEAKLRLRVLPTLVVQ 203
>sp|B3MRT7|NFU1_DROAN NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila ananassae GN=GF20932 PE=3 SV=1
Length = 286
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 87 IESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKI 145
I+ +LD IRP + DGG++ + +V+LK+QG+C SCPSS++T+K G++ L I
Sbjct: 182 IKELLDTRIRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYI 241
Query: 146 PEIVAVESVAD 156
PE+ +VE V D
Sbjct: 242 PEVESVEQVFD 252
>sp|Q9LIG6|NIFU4_ARATH NifU-like protein 4, mitochondrial OS=Arabidopsis thaliana GN=NIFU4
PE=2 SV=1
Length = 283
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 49 HSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLD-EIRPYLISDGGNVAL 107
+SS + L + + AA ++ A++ DS T I+ +L+ IRP + DGG++
Sbjct: 165 YSSGQPLFLDSQAAAAKDT--AISEDDSE-----TVAMIKELLETRIRPAVQDDGGDIEY 217
Query: 108 HEID--GNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEE 158
D +V+L++QGAC CPSS +T+K GIE LM + E+ VE D E
Sbjct: 218 CGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSEVKGVEQEFDGE 270
>sp|Q056Z1|NFUA_BUCCC Fe/S biogenesis protein NfuA OS=Buchnera aphidicola subsp. Cinara
cedri (strain Cc) GN=nfuA PE=3 SV=1
Length = 193
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 93 EIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
+I P L+ GG+VAL++I D VV LK G C C +T+K GIE++L++ PEI +V
Sbjct: 120 QINPKLLLHGGSVALYDITDSGVVFLKFSGGCNGCSMIDITLKKGIEKKLIKNFPEISSV 179
Query: 152 ESVADEETG 160
E V +G
Sbjct: 180 EDVTHHISG 188
>sp|Q9C8J2|NIFU5_ARATH NifU-like protein 5, mitochondrial OS=Arabidopsis thaliana GN=NIFU5
PE=2 SV=1
Length = 275
Score = 60.8 bits (146), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 69 KAVATPDSAI--ELPLTAENIESVLD-EIRPYLISDGGNVAL--HEIDGNVVRLKLQGAC 123
+A A D+AI + T I+ +L+ IRP + DGG++ + + +V+L++QGAC
Sbjct: 171 QATAAKDTAIHEDDSETVAMIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGAC 230
Query: 124 GSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEE 158
CPSS +T+K GIE LM + E+ VE D E
Sbjct: 231 SGCPSSSVTLKSGIENMLMHYVSEVKGVEQEFDGE 265
>sp|C5BJC0|NFUA_TERTT Fe/S biogenesis protein NfuA OS=Teredinibacter turnerae (strain
ATCC 39867 / T7901) GN=nfuA PE=3 SV=1
Length = 194
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 73 TPDSAIELPLTAENIESVL-DEIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSV 130
+ DS IE + I VL +E+ P L S GGNV+L + D + L+ G C C +
Sbjct: 105 SDDSPIE-----DKINYVLYNEVNPGLASHGGNVSLERLTDDGMAILRFGGGCQGCSAVD 159
Query: 131 MTMKMGIERRLMEKIPEIVAVESVADE 157
MT+K G+E+ LME+IPE+ V V D
Sbjct: 160 MTLKQGVEKTLMERIPELAGVRDVTDH 186
>sp|Q2P1A3|NFUA_XANOM Fe/S biogenesis protein NfuA OS=Xanthomonas oryzae pv. oryzae
(strain MAFF 311018) GN=nfuA PE=3 SV=1
Length = 199
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 90 VLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEI 148
V +EI P L S GG VA+ E+ + VV L+ G C C + +T+K GIE+ LM ++P +
Sbjct: 117 VENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMADVTLKQGIEKTLMGRVPGV 176
Query: 149 VAVESVADEETG 160
+AV D TG
Sbjct: 177 IAVRDATDHATG 188
>sp|B2STN5|NFUA_XANOP Fe/S biogenesis protein NfuA OS=Xanthomonas oryzae pv. oryzae
(strain PXO99A) GN=nfuA PE=3 SV=1
Length = 199
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 90 VLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEI 148
V +EI P L S GG VA+ E+ + VV L+ G C C + +T+K GIE+ LM ++P +
Sbjct: 117 VENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMADVTLKQGIEKTLMGRVPGV 176
Query: 149 VAVESVADEETG 160
+AV D TG
Sbjct: 177 IAVRDATDHATG 188
>sp|B0RTH4|NFUA_XANCB Fe/S biogenesis protein NfuA OS=Xanthomonas campestris pv.
campestris (strain B100) GN=nfuA PE=3 SV=1
Length = 199
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 90 VLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEI 148
V +EI P L S GG VA+ E+ VV L+ G C C + +T+K GIE+ LM ++P +
Sbjct: 117 VENEINPQLASHGGRVAVQEVSAEGVVLLRFGGGCHGCGMADVTLKQGIEKTLMGRVPGV 176
Query: 149 VAVESVADEETG 160
+AV D TG
Sbjct: 177 IAVRDATDHATG 188
>sp|Q3BSV3|NFUA_XANC5 Fe/S biogenesis protein NfuA OS=Xanthomonas campestris pv.
vesicatoria (strain 85-10) GN=nfuA PE=3 SV=1
Length = 199
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 90 VLDEIRPYLISDGGNVALHEIDGN-VVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEI 148
V +EI P L S GG VA+ E+ + VV L+ G C C + +T+K GIE+ LM ++P +
Sbjct: 117 VENEINPQLASHGGRVAVQEVSADGVVLLRFGGGCHGCGMADVTLKQGIEKTLMGRVPGV 176
Query: 149 VAVESVADEETG 160
AV D TG
Sbjct: 177 TAVRDATDHATG 188
>sp|P32860|NFU1_YEAST NifU-like protein, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NFU1 PE=1 SV=2
Length = 256
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 84 AENIESVLD-EIRPYLISDGGNVALHEID--GNVVRLKLQGACGSCPSSVMTMKMGIERR 140
+E IE ++D IRP ++ DGG++ D V L+LQGAC SC SS +T+K GIE
Sbjct: 154 SELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSSSEVTLKYGIESM 213
Query: 141 LMEKIPEIVAVESVADEETGLELNE-ENIEKVLE 173
L + E+ V + D E + L E + +EK LE
Sbjct: 214 LKHYVDEVKEVIQIMDPEQEIALKEFDKLEKKLE 247
>sp|Q8P8Z9|NFUA_XANCP Fe/S biogenesis protein NfuA OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=nfuA PE=3 SV=1
Length = 199
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 90 VLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEI 148
V +EI P L S GG VA+ E+ VV L+ G C C + +T+K GIE+ LM ++P +
Sbjct: 117 VENEINPQLASHGGRVAVQEVSAEGVVLLRFGGGCHGCGMADVTLKQGIEKTLMGRLPGV 176
Query: 149 VAVESVADEETG 160
+AV D TG
Sbjct: 177 IAVRDATDHATG 188
>sp|Q4UUW4|NFUA_XANC8 Fe/S biogenesis protein NfuA OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=nfuA PE=3 SV=1
Length = 199
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 90 VLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEI 148
V +EI P L S GG VA+ E+ VV L+ G C C + +T+K GIE+ LM ++P +
Sbjct: 117 VENEINPQLASHGGRVAVQEVSAEGVVLLRFGGGCHGCGMADVTLKQGIEKTLMGRLPGV 176
Query: 149 VAVESVADEETG 160
+AV D TG
Sbjct: 177 IAVRDATDHATG 188
>sp|Q8PKQ2|NFUA_XANAC Fe/S biogenesis protein NfuA OS=Xanthomonas axonopodis pv. citri
(strain 306) GN=nfuA PE=3 SV=1
Length = 199
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 90 VLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEI 148
V +EI P L S GG VA+ E+ VV L+ G C C + +T+K GIE+ LM ++P +
Sbjct: 117 VENEINPQLASHGGRVAVQEVSAEGVVLLRFGGGCHGCGMADVTLKQGIEKTLMGRVPGV 176
Query: 149 VAVESVADEETG 160
AV D TG
Sbjct: 177 TAVRDATDHATG 188
>sp|B4SPV3|NFUA_STRM5 Fe/S biogenesis protein NfuA OS=Stenotrophomonas maltophilia
(strain R551-3) GN=nfuA PE=3 SV=1
Length = 199
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 90 VLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEI 148
V +EI P L S GG VA+ E+ VV L+ G C C + +T+K GIE+ LM ++P +
Sbjct: 117 VENEINPQLASHGGKVAVQEVSAEGVVLLRFGGGCQGCGMADVTLKQGIEKTLMGRVPGV 176
Query: 149 VAVESVADEETG 160
AV D ++G
Sbjct: 177 TAVRDATDHDSG 188
>sp|B2FM87|NFUA_STRMK Fe/S biogenesis protein NfuA OS=Stenotrophomonas maltophilia
(strain K279a) GN=nfuA PE=3 SV=1
Length = 199
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 90 VLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEI 148
V +EI P L S GG VA+ E+ VV L+ G C C + +T+K GIE+ LM ++P +
Sbjct: 117 VENEINPQLASHGGKVAVQEVSAEGVVLLRFGGGCQGCGMADVTLKQGIEKTLMGRVPGV 176
Query: 149 VAVESVADEETG 160
AV D ++G
Sbjct: 177 TAVRDATDHDSG 188
>sp|P05340|NIFU_AZOVI Nitrogen fixation protein NifU OS=Azotobacter vinelandii GN=nifU
PE=3 SV=2
Length = 312
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
IE+VL IRP L D G+V L ++DG V +KL GAC C + MT+ GI++RL+E++
Sbjct: 236 IETVLAAIRPTLQRDKGDVELIDVDGKNVYVKLTGACTGCQMASMTLG-GIQQRLIEELG 294
Query: 147 EIVAV 151
E V V
Sbjct: 295 EFVKV 299
>sp|P23121|NIFU_AZOCH Nitrogen fixation protein NifU OS=Azotobacter chroococcum mcd 1
GN=nifU PE=3 SV=1
Length = 309
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 87 IESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIP 146
IE+VL IRP L D G+V L ++DG + +KL GAC C + MT+ GI++RL+E++
Sbjct: 234 IETVLAAIRPTLQRDKGDVELIDVDGKNIYVKLTGACTGCQMASMTLG-GIQQRLIEELG 292
Query: 147 EIVAV 151
E V V
Sbjct: 293 EFVKV 297
>sp|B0U5V3|NFUA_XYLFM Fe/S biogenesis protein NfuA OS=Xylella fastidiosa (strain M12)
GN=nfuA PE=3 SV=1
Length = 199
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 90 VLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEI 148
V +EI P L S GG V + E+ VV L+ G C C + +T+K G+E+ LME++ +
Sbjct: 117 VENEINPQLASHGGRVEVQEVSAEGVVLLRFGGGCHGCGMADVTLKQGVEKTLMERVHGV 176
Query: 149 VAVESVADEETG 160
+AV D TG
Sbjct: 177 IAVRDATDHSTG 188
>sp|Q9UUB8|YH9J_SCHPO NifU-like protein C1709.19c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC1709.19c PE=3 SV=1
Length = 260
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 60 RGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEID--GNVVRL 117
+GA+ ++++ DS I + + E IE+ IRP + DGG+V D V L
Sbjct: 143 KGASDTQILES----DSQI-VAMIKELIET---SIRPSIQEDGGDVEFRGFDEKTGTVSL 194
Query: 118 KLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEE 158
KL+GAC +C SS +T+K GI++ L IPE+ V V D E
Sbjct: 195 KLRGACRTCSSSAVTLKNGIQQMLKHYIPEVENVVQVLDPE 235
>sp|Q8E8P2|NFUA_SHEON Fe/S biogenesis protein NfuA OS=Shewanella oneidensis (strain MR-1)
GN=nfuA PE=3 SV=1
Length = 192
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 77 AIELPLTAENIESVLD-EIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMK 134
A + PL E IE V+ EI P L S GGN+ L EI G V L+ G C C +T+K
Sbjct: 102 AGDAPLV-ERIEYVIQSEINPQLASHGGNIMLVEITGEGVAVLQFGGGCNGCSQVDITLK 160
Query: 135 MGIERRLMEKIP-EIVAVESVADEETG 160
GIE++L++ P E+ V V D + G
Sbjct: 161 DGIEKQLLDMFPGELTGVRDVTDHQHG 187
>sp|Q9PAB5|NFUA_XYLFA Fe/S biogenesis protein NfuA OS=Xylella fastidiosa (strain 9a5c)
GN=nfuA PE=3 SV=2
Length = 199
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 90 VLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEI 148
V +EI P L S GG V + E+ VV L+ G C C +T+K G+E+ LME++ +
Sbjct: 117 VENEINPQLASHGGRVEVQEVSAEGVVLLRFGGGCHGCGMVDVTLKQGVEKTLMERVHGV 176
Query: 149 VAVESVADEETG 160
+AV D TG
Sbjct: 177 IAVRDATDHSTG 188
>sp|Q87A52|NFUA_XYLFT Fe/S biogenesis protein NfuA OS=Xylella fastidiosa (strain
Temecula1 / ATCC 700964) GN=nfuA PE=3 SV=1
Length = 199
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 90 VLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEI 148
V +EI P L S GG V + E+ VV L+ G C C + +T+K G+E+ LM+++ +
Sbjct: 117 VENEINPQLASHGGRVEVQEVSAEGVVLLRFGGGCHGCGMADVTLKQGVEKTLMDRVHGV 176
Query: 149 VAVESVADEETG 160
+AV D TG
Sbjct: 177 IAVRDATDHSTG 188
>sp|B2I9W5|NFUA_XYLF2 Fe/S biogenesis protein NfuA OS=Xylella fastidiosa (strain M23)
GN=nfuA PE=3 SV=1
Length = 199
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 90 VLDEIRPYLISDGGNVALHEIDG-NVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEI 148
V +EI P L S GG V + E+ VV L+ G C C + +T+K G+E+ LM+++ +
Sbjct: 117 VENEINPQLASHGGRVEVQEVSAEGVVLLRFGGGCHGCGMADVTLKQGVEKTLMDRVHGV 176
Query: 149 VAVESVADEETG 160
+AV D TG
Sbjct: 177 IAVRDATDHSTG 188
>sp|Q9I2P8|NFUA_PSEAE Fe/S biogenesis protein NfuA OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=nfuA PE=3
SV=1
Length = 194
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 93 EIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
EI P L S GG V+L ++ + N+ L+ G C C MT+K G+E+ L+E+IPE+ V
Sbjct: 121 EINPGLASHGGQVSLVDVVEDNIAVLRFGGGCQGCGMVDMTLKDGVEKTLIERIPELKGV 180
Query: 152 ESVADEETGLELNEEN 167
V D N+EN
Sbjct: 181 RDVTDHS-----NKEN 191
>sp|Q02KZ2|NFUA_PSEAB Fe/S biogenesis protein NfuA OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=nfuA PE=3 SV=1
Length = 194
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 93 EIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
EI P L S GG V+L ++ + N+ L+ G C C MT+K G+E+ L+E+IPE+ V
Sbjct: 121 EINPGLASHGGQVSLVDVVEDNIAVLRFGGGCQGCGMVDMTLKDGVEKTLIERIPELKGV 180
Query: 152 ESVADEETGLELNEEN 167
V D N+EN
Sbjct: 181 RDVTDHS-----NKEN 191
>sp|B7VB28|NFUA_PSEA8 Fe/S biogenesis protein NfuA OS=Pseudomonas aeruginosa (strain
LESB58) GN=nfuA PE=3 SV=1
Length = 194
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 93 EIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
EI P L S GG V+L ++ + N+ L+ G C C MT+K G+E+ L+E+IPE+ V
Sbjct: 121 EINPGLASHGGQVSLVDVVEDNIAVLRFGGGCQGCGMVDMTLKDGVEKTLIERIPELKGV 180
Query: 152 ESVADEETGLELNEEN 167
V D N+EN
Sbjct: 181 RDVTDHS-----NKEN 191
>sp|A6V6X0|NFUA_PSEA7 Fe/S biogenesis protein NfuA OS=Pseudomonas aeruginosa (strain PA7)
GN=nfuA PE=3 SV=1
Length = 194
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 93 EIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAV 151
EI P L S GG V+L ++ + N+ L+ G C C MT+K G+E+ L+E+IPE+ V
Sbjct: 121 EINPGLASHGGQVSLVDVVEDNIAVLRFGGGCQGCGMVDMTLKDGVEKTLIERIPELKGV 180
Query: 152 ESVADEETGLELNEEN 167
V D N+EN
Sbjct: 181 RDVTDHS-----NKEN 191
>sp|Q6CZL7|NFUA_ERWCT Fe/S biogenesis protein NfuA OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=nfuA
PE=3 SV=1
Length = 191
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 85 ENIESVLD-EIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMKMGIERRLM 142
E +E VL +I P L GG V L EI D + L+ G C C T+K GIE+ L+
Sbjct: 109 ERVEYVLQSQINPQLAGHGGRVTLMEITDDGLAILQFGGGCNGCSMVDFTLKEGIEKELL 168
Query: 143 EKIPEIVAVESVADEETG 160
EK PE+ V + + + G
Sbjct: 169 EKFPELKGVRDLTEHQRG 186
>sp|Q5QZC8|NFUA_IDILO Fe/S biogenesis protein NfuA OS=Idiomarina loihiensis (strain ATCC
BAA-735 / DSM 15497 / L2-TR) GN=nfuA PE=3 SV=1
Length = 192
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 77 AIELPLTAENIESVLD-EIRPYLISDGGNVALHEI-DGNVVRLKLQGACGSCPSSVMTMK 134
A + PL E +E V+ EI P L S GG V + EI D V L+ G C C +T+K
Sbjct: 102 ADDAPLI-ERVEYVIQAEINPQLASHGGQVMISEITDDGVAILQFGGGCNGCSMIDVTLK 160
Query: 135 MGIERRLMEKIPEIV-AVESVADEETG 160
GIE+ L+E+ PE V V + D E G
Sbjct: 161 NGIEKELLERFPEEVKGVRDITDHEPG 187
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,816,794
Number of Sequences: 539616
Number of extensions: 3061723
Number of successful extensions: 12154
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 11814
Number of HSP's gapped (non-prelim): 312
length of query: 232
length of database: 191,569,459
effective HSP length: 114
effective length of query: 118
effective length of database: 130,053,235
effective search space: 15346281730
effective search space used: 15346281730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)