BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026831
(232 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MAH3|DJ1B_ARATH Protein DJ-1 homolog B OS=Arabidopsis thaliana GN=DJ1B PE=2 SV=1
Length = 438
Score = 198 bits (503), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 93/112 (83%), Positives = 104/112 (92%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNK 177
GGLGGA+AFA SEKLVNMLKKQ ESN+PYGAICASPALV EPHGLLKGKKATAFPAMC+K
Sbjct: 327 GGLGGAEAFASSEKLVNMLKKQAESNKPYGAICASPALVFEPHGLLKGKKATAFPAMCSK 386
Query: 178 LSDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLL 229
L+DQS IE+RV+VDGNLITSRGPGTS+EFALAIVEKF+GR K L+L+K L+
Sbjct: 387 LTDQSHIEHRVLVDGNLITSRGPGTSLEFALAIVEKFYGREKGLQLSKATLV 438
Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNK 177
GGL G + + L M+KKQ R AIC +PAL GLL+GKKAT +P K
Sbjct: 122 GGLPGGETLKNCKPLEKMVKKQDTDGRLNAAICCAPALAFGTWGLLEGKKATCYPVFMEK 181
Query: 178 LSD-QSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLL 229
L+ + +E+RV +DG ++TSRGPGT+MEF++ +VE+ G+ KA+E++ L++
Sbjct: 182 LAACATAVESRVEIDGKIVTSRGPGTTMEFSVTLVEQLLGKEKAVEVSGPLVM 234
>sp|Q9FPF0|DJ1A_ARATH Protein DJ-1 homolog A OS=Arabidopsis thaliana GN=DJ1A PE=1 SV=1
Length = 392
Score = 169 bits (427), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/112 (71%), Positives = 94/112 (83%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNK 177
GGL GAQ FA EKLVNML+KQ E+N+PYG ICASPA V EP+GLLKGKKAT P + +K
Sbjct: 281 GGLNGAQRFASCEKLVNMLRKQAEANKPYGGICASPAYVFEPNGLLKGKKATTHPVVSDK 340
Query: 178 LSDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLL 229
LSD+S IE+RVVVDGN+ITSR PGT+MEF+LAIVEKF+GR KAL+L K L+
Sbjct: 341 LSDKSHIEHRVVVDGNVITSRAPGTAMEFSLAIVEKFYGREKALQLGKATLV 392
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 76/114 (66%), Gaps = 2/114 (1%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNK 177
GGL G + + L NM+KKQ R AIC +PAL L GLL+GKKAT +P K
Sbjct: 75 GGLPGGETLKNCKSLENMVKKQDSDGRLNAAICCAPALALGTWGLLEGKKATGYPVFMEK 134
Query: 178 LSDQ--SEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLL 229
L+ + +E+RV +DG ++TSRGPGT++EF++ ++E+ FG+ KA E++ ILLL
Sbjct: 135 LAATCATAVESRVQIDGRIVTSRGPGTTIEFSITLIEQLFGKEKADEVSSILLL 188
>sp|Q8VY09|DJ1C_ARATH Protein DJ-1 homolog C OS=Arabidopsis thaliana GN=DJ1C PE=2 SV=1
Length = 472
Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 64/112 (57%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNK 177
GG+ GA E L ++K+Q E R YGAI +PA+ L P GLL K+ T PA K
Sbjct: 153 GGMPGAVRLRDCEILEKIMKRQAEDKRLYGAISMAPAITLLPWGLLTRKRTTGHPAFFGK 212
Query: 178 LSDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLL 229
L ++ + + G L TSRGPGTS +FAL++ E+ FG A + + LLL
Sbjct: 213 LPTFWAVKTNIQISGELTTSRGPGTSFQFALSLAEQLFGETTAKSIEEFLLL 264
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNK 177
GG G++ KS+ L +L++Q ES R YGA +S + VL HGLLK K+ T +P+ ++
Sbjct: 356 GGHTGSERLQKSKILKKLLREQHESGRIYGATNSS-STVLHKHGLLKEKRTTVYPSESDE 414
Query: 178 LSDQSEIEN-RVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 220
+Q IE VV+DGN+ITS G T +F+LAIV K FG +A
Sbjct: 415 PMNQQMIEGAEVVIDGNVITSLGLATVTKFSLAIVSKLFGHARA 458
>sp|Q46948|YAJL_ECOLI Chaperone protein YajL OS=Escherichia coli (strain K12) GN=yajL
PE=1 SV=2
Length = 196
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 16/150 (10%)
Query: 97 SEDNMSREFEKAARRLENARL--------------GGLGGAQAFAKSEKLVNMLKKQKES 142
S+ N++ + + L +A L GG+ GA+ F S LV +K+ S
Sbjct: 39 SDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRS 98
Query: 143 NRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEIENRVVVDG--NLITSRGP 200
R AICA+PA VL PH + T FP + +K+ + ++ RVV D L+TS+GP
Sbjct: 99 GRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGP 158
Query: 201 GTSMEFALAIVEKFFGRNKALELAKILLLS 230
GT+++F L I++ GR KA E+A L+++
Sbjct: 159 GTAIDFGLKIIDLLVGREKAHEVASQLVMA 188
>sp|Q5XJ36|PARK7_DANRE Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1
Length = 189
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNK 177
GGL GAQ ++S + +LK Q+ AICA P +L HG+ G T P +K
Sbjct: 74 GGLLGAQNLSESPAVKEVLKDQEGRKGLIAAICAGPTALLA-HGIAYGSTVTTHPGAKDK 132
Query: 178 L--SDQSEI-ENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLL 229
+ D + E RV DGN+ITSRGPGTS EFAL IVE+ G A ++ L+L
Sbjct: 133 MMAGDHYKYSEARVQKDGNVITSRGPGTSFEFALTIVEELMGAEVAAQVKAPLIL 187
>sp|Q8UW59|PARK7_CHICK Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1
Length = 189
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNK 177
GG GAQ ++S + ++LK Q+ AICA P +L HG+ G K P +K
Sbjct: 74 GGNLGAQNLSESAAVKDILKDQESRKGLIAAICAGPTALLA-HGIGFGSKVITHPLAKDK 132
Query: 178 LSDQSEI---ENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLL 229
+ + + E+RV DGN++TSRGPGTS EF LAIVE G+ A ++ L+L
Sbjct: 133 MMNGAHYCYSESRVEKDGNILTSRGPGTSFEFGLAIVEALMGKEVAEQVKAPLIL 187
>sp|P55880|YAJL_SALTY Chaperone protein YajL OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=yajL PE=3 SV=2
Length = 196
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNK 177
GG+ GA+ F S LV +K+ S R AICA+ A VL PH + T FPA+ +K
Sbjct: 74 GGIKGAECFRDSPLLVETVKQFHRSGRIVAAICAAAATVLVPHDIFPIGNMTGFPALKDK 133
Query: 178 LSDQSEIENRVVVDG--NLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLLS 230
+ + ++ RVV D L+TS+GPGT+++F L I++ GR KA E+A L+++
Sbjct: 134 IPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLAGREKAHEVASQLVMA 188
>sp|Q7TQ35|PARK7_MESAU Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1 SV=1
Length = 189
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNK 177
GG GAQ ++S + +LK+Q+ AICA P +L H + G K T P +K
Sbjct: 74 GGNLGAQNLSESPVVKEILKEQESRKGLIAAICAGPTALLA-HEIGFGSKVTTHPGAKDK 132
Query: 178 L---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLL 229
+ S S E+RV DG ++TSRGPGTS EFALAIVE G+ A ++ L+L
Sbjct: 133 MMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKEAADQVKAPLVL 187
>sp|Q5E946|PARK7_BOVIN Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1
Length = 189
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNK 177
GG GAQ ++S + +LK+Q++ AICA P +L H + G K T P +K
Sbjct: 74 GGNLGAQNLSESAAVKEILKEQEKRKGLIAAICAGPTALLA-HEIGFGSKVTTHPLAKDK 132
Query: 178 L---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLL 229
+ S S ENRV DG ++TSRGPGTS EFAL IVE G+ A ++ L+L
Sbjct: 133 MMNGSHYSYSENRVEKDGLILTSRGPGTSFEFALKIVEVLVGKEVADQVKAPLVL 187
>sp|Q99497|PARK7_HUMAN Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2
Length = 189
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNK 177
GG GAQ ++S + +LK+Q+ AICA P +L H + G K T P +K
Sbjct: 74 GGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLA-HEIGFGSKVTTHPLAKDK 132
Query: 178 LSDQSEI---ENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLL 229
+ + ENRV DG ++TSRGPGTS EFALAIVE G+ A ++ L+L
Sbjct: 133 MMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVL 187
>sp|Q95LI9|PARK7_CHLAE Protein DJ-1 OS=Chlorocebus aethiops GN=PARK7 PE=2 SV=1
Length = 189
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNK 177
GG GAQ ++S + +LK+Q+ AICA P +L H + G K T P +K
Sbjct: 74 GGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLA-HEIGFGSKVTTHPLAKDK 132
Query: 178 LSDQSEI---ENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLL 229
+ + ENRV DG ++TSRGPGTS EFALAIVE G+ A ++ L+L
Sbjct: 133 MMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVL 187
>sp|Q99LX0|PARK7_MOUSE Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1
Length = 189
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNK 177
GG GAQ ++S + +LK+Q+ AICA P +L H + G K T P +K
Sbjct: 74 GGNLGAQNLSESPMVKEILKEQESRKGLIAAICAGPTALLA-HEVGFGCKVTTHPLAKDK 132
Query: 178 L---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLL 229
+ S S E+RV DG ++TSRGPGTS EFALAIVE G++ A ++ L+L
Sbjct: 133 MMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALVGKDMANQVKAPLVL 187
>sp|O88767|PARK7_RAT Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV=1
Length = 189
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNK 177
GG GAQ ++S + +LK+Q+ AICA P +L H + G K T+ P +K
Sbjct: 74 GGNLGAQNLSESALVKEILKEQENRKGLIAAICAGPTALLA-HEVGFGCKVTSHPLAKDK 132
Query: 178 L---SDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLL 229
+ S S E+RV DG ++TSRGPGTS EFALAIVE G++ A ++ L+L
Sbjct: 133 MMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKDMANQVKAPLVL 187
>sp|Q58377|Y967_METJA Uncharacterized protein MJ0967 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0967 PE=3 SV=1
Length = 205
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 5/100 (5%)
Query: 117 LGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPA--M 174
+GG+G + + KL+ ++K+ N+ AIC SP +VL G+LKGKKAT +PA
Sbjct: 100 VGGIGSKEYLWNNTKLIELVKEFYNKNKVVSAICLSP-VVLARAGILKGKKATVYPAPEA 158
Query: 175 CNKLSDQSEI-ENR-VVVDGNLITSRGPGTSMEFALAIVE 212
+L I E+R VVVDGN+IT++ P + F L +++
Sbjct: 159 IEELKKAGAIYEDRGVVVDGNVITAKSPDYARLFGLEVLK 198
>sp|P47275|Y029_MYCGE Uncharacterized protein MG029 OS=Mycoplasma genitalium (strain ATCC
33530 / G-37 / NCTC 10195) GN=MG029 PE=4 SV=1
Length = 186
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 118 GGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLL-KGKKATAFPAMCN 176
GG+G + K EKL+ + K +N AIC +P VL HG++ K + ++FP N
Sbjct: 70 GGIGATKHLDKDEKLLKTINYFKVNNLYLFAICDTPN-VLFKHGIITKDEIYSSFPNP-N 127
Query: 177 KLSDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELA 224
+ ++ +V V LIT+R G ++EFA IV F N EL
Sbjct: 128 LVMSENRSTAKVTVANKLITARSAGCALEFATVIVCTFLKDNTLNELV 175
>sp|Q9V1F8|PFPI_PYRAB Intracellular protease 1 OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=pfpI PE=3 SV=1
Length = 166
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 129 SEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQ--SEIEN 186
+EK V + KK +P +IC P +++ G+L+G++ T++P + + + + ++
Sbjct: 79 NEKAVEIAKKMFSEGKPVASICHGPQILISA-GVLRGRRGTSYPGIKDDMINAGVDWVDA 137
Query: 187 RVVVDGNLITSRGPG 201
VVVDGN ++SR PG
Sbjct: 138 EVVVDGNWVSSRVPG 152
>sp|Q8G9F9|INHA_PSEPU Isonitrile hydratase OS=Pseudomonas putida GN=inhA PE=1 SV=1
Length = 228
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 119 GLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKL 178
G G + E+ ++ ++ Q R ++C +LVL GLL+GK+AT A + L
Sbjct: 70 GGAGVGPLMEDEQTLDFIRSQAAQARYVTSVCTG-SLVLGAAGLLQGKRATTHWAYHDLL 128
Query: 179 SDQSEI--ENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 220
I ++RVV DGNL T G ++FAL + ++ G + A
Sbjct: 129 PTLGAIPVKDRVVRDGNLFTGGGITAGIDFALTLAQELVGVDTA 172
>sp|Q5JGM7|PFPI_PYRKO Intracellular protease 1 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pfpI PE=3 SV=1
Length = 166
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 129 SEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQS--EIEN 186
+EK V + KK E +P +IC P +++ G+LKG+K T+ + + + + I+
Sbjct: 79 NEKAVAITKKMFEDGKPVASICHGPQILISA-GVLKGRKGTSTVTIRDDVKNAGAEWIDA 137
Query: 187 RVVVDGNLITSRGPG 201
VVVDGN ++SR PG
Sbjct: 138 EVVVDGNWVSSRHPG 152
>sp|O59413|PFPI_PYRHO Intracellular protease 1 OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pfpI PE=1 SV=1
Length = 166
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 129 SEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQS--EIEN 186
+EK V++ +K +P +IC P +++ G+L+G+K T++P + + + + ++
Sbjct: 79 NEKAVSIARKMFSEGKPVASICHGPQILISA-GVLRGRKGTSYPGIKDDMINAGVEWVDA 137
Query: 187 RVVVDGNLITSRGP 200
VVVDGN ++SR P
Sbjct: 138 EVVVDGNWVSSRVP 151
>sp|Q51732|PFPI_PYRFU Intracellular protease 1 OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=pfpI PE=1 SV=1
Length = 166
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 129 SEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQS--EIEN 186
+EK V + +K +P IC P +++ G+LKG+K T++ + + + + I+
Sbjct: 79 NEKAVEIARKMFTEGKPVATICHGPQILISA-GVLKGRKGTSYIGIRDDMINAGVEWIDR 137
Query: 187 RVVVDGNLITSRGPG 201
VVVDGN ++SR PG
Sbjct: 138 EVVVDGNWVSSRHPG 152
>sp|Q10356|YDB3_SCHPO Uncharacterized protein C22E12.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC22E12.03c PE=1 SV=1
Length = 191
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 97 SEDNMSREFEKAARRLENARLGGLGGAQAFAKSEKLVNMLKK-QKESNRPYGAICASPAL 155
S D+ +++++ A GG GA+ + + + ++K+ K+ N+ G ICA L
Sbjct: 63 SADDFAKQYDIAIIP------GGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAG-TL 115
Query: 156 VLEPHGLLKGKKATAFPAMCNKLSDQSE--IENRVVVDGNLITSRGPGTSMEFALAIVEK 213
+ GL K+ T P++ +L + ++ VV++ NLITS+GPGT+M F L ++E+
Sbjct: 116 TAKTSGL-PNKQITGHPSVRGQLEEGGYKYLDQPVVLEENLITSQGPGTAMLFGLKLLEQ 174
Query: 214 FFGRNK 219
++K
Sbjct: 175 VASKDK 180
>sp|O28987|Y1281_ARCFU Uncharacterized protein AF_1281 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_1281 PE=3 SV=1
Length = 168
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 129 SEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEI-ENR 187
+E+ V ++K E +P AIC P L++ + KG++ T++ + + L + E+R
Sbjct: 79 NERAVEIVKDFLELGKPVAAICHGPQLLISAMAV-KGRRMTSWIGIRDDLIAAGALYEDR 137
Query: 188 -VVVDGNLITSRGP 200
VVVDGN+ITSR P
Sbjct: 138 PVVVDGNVITSRMP 151
>sp|Q9M8R4|DJ1D_ARATH Protein DJ-1 homolog D OS=Arabidopsis thaliana GN=DJ1D PE=1 SV=1
Length = 388
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 126 FAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPA--MCNKLSDQSE 183
A +E ++N++K+ S +P +IC +L G+LKG+K TA+PA + L +
Sbjct: 289 LALNEHVLNIVKEFMNSEKPVASICHGQQ-ILAAAGVLKGRKCTAYPAVKLNVVLGGGTW 347
Query: 184 IE----NRVVVDGNLIT-SRGPG 201
+E +R DGNL+T + PG
Sbjct: 348 LEPDPIDRCFTDGNLVTGAAWPG 370
>sp|Q54MG7|PARK7_DICDI Protein DJ-1 OS=Dictyostelium discoideum GN=DDB_G0285969 PE=3 SV=1
Length = 205
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 21/109 (19%)
Query: 127 AKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAF--------------- 171
A SE + +++ + ++C + AL L G+LKG+ AT +
Sbjct: 94 AYSEDVSQLIRDFDSKGKHIASVCVA-ALALGKSGILKGRNATTYRNSLREHSVRQQQLR 152
Query: 172 PAMCNKLSDQSEIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 220
N ++DQS +V+D N+ITS P T+ A ++ + NKA
Sbjct: 153 DFGANVIADQS-----IVIDKNVITSYNPQTAPYVAFELLSRLSDENKA 196
>sp|Q8CRV8|Y1560_STAES Uncharacterized protein SE_1560 OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_1560 PE=3 SV=1
Length = 172
Score = 38.1 bits (87), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 142 SNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSE--IENRVVVDGNLITSRG 199
++ P AIC P LVL LKG+ T + LS+ ++ VVVD N++TSR
Sbjct: 97 NDVPTFAICHGP-LVLVDTDDLKGRTITGVINVRKDLSNAGANVVDESVVVDNNIVTSRV 155
Query: 200 PGTSMEFALAIVEKF 214
P +F IV+K
Sbjct: 156 PDDLDDFNREIVKKL 170
>sp|Q5HN59|Y1413_STAEQ Uncharacterized protein SERP1413 OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP1413 PE=3 SV=1
Length = 172
Score = 38.1 bits (87), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 142 SNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSE--IENRVVVDGNLITSRG 199
++ P AIC P LVL LKG+ T + LS+ ++ VVVD N++TSR
Sbjct: 97 NDVPTFAICHGP-LVLVDTDDLKGRTITGVINVRKDLSNAGANVVDESVVVDNNIVTSRV 155
Query: 200 PGTSMEFALAIVEKF 214
P +F IV+K
Sbjct: 156 PDDLDDFNREIVKKL 170
>sp|Q49WT1|Y1625_STAS1 Uncharacterized protein SSP1625 OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=SSP1625 PE=3 SV=1
Length = 172
Score = 38.1 bits (87), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 141 ESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSE--IENRVVVDGNLITSR 198
+++ P AIC P L+++ L KG+ T + LS+ ++ VV+D N++TSR
Sbjct: 96 QNDVPTFAICHGPLLLVDTDDL-KGRTITGVINVRKDLSNAGAHVVDESVVIDNNIVTSR 154
Query: 199 GPGTSMEFALAIVEKF 214
P +F I++K
Sbjct: 155 VPDDLDDFNREIIKKL 170
>sp|P0A0K3|Y2013_STAA8 Uncharacterized protein SAOUHSC_02013 OS=Staphylococcus aureus
(strain NCTC 8325) GN=SAOUHSC_02013 PE=3 SV=1
Length = 171
Score = 37.4 bits (85), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 141 ESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSE--IENRVVVDGNLITSR 198
+++ P AIC P ++++ L KG+ TA + LS+ ++ VVVD N++TSR
Sbjct: 96 KNDVPTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSR 154
Query: 199 GPGTSMEFALAIVEKF 214
P +F IV++
Sbjct: 155 VPDDLDDFNREIVKQL 170
>sp|Q5HEP9|Y1933_STAAC Uncharacterized protein SACOL1933 OS=Staphylococcus aureus (strain
COL) GN=SACOL1933 PE=3 SV=1
Length = 171
Score = 37.4 bits (85), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 141 ESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSE--IENRVVVDGNLITSR 198
+++ P AIC P ++++ L KG+ TA + LS+ ++ VVVD N++TSR
Sbjct: 96 KNDVPTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSR 154
Query: 199 GPGTSMEFALAIVEKF 214
P +F IV++
Sbjct: 155 VPDDLDDFNREIVKQL 170
>sp|P0A0K0|Y1875_STAAM Uncharacterized protein SAV1875 OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV1875 PE=3 SV=1
Length = 171
Score = 37.4 bits (85), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 141 ESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSE--IENRVVVDGNLITSR 198
+++ P AIC P ++++ L KG+ TA + LS+ ++ VVVD N++TSR
Sbjct: 96 KNDVPTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSR 154
Query: 199 GPGTSMEFALAIVEKF 214
P +F IV++
Sbjct: 155 VPDDLDDFNREIVKQL 170
>sp|P0A0K2|Y1815_STAAW Uncharacterized protein MW1815 OS=Staphylococcus aureus (strain
MW2) GN=MW1815 PE=3 SV=1
Length = 171
Score = 37.4 bits (85), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 141 ESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSE--IENRVVVDGNLITSR 198
+++ P AIC P ++++ L KG+ TA + LS+ ++ VVVD N++TSR
Sbjct: 96 KNDVPTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSR 154
Query: 199 GPGTSMEFALAIVEKF 214
P +F IV++
Sbjct: 155 VPDDLDDFNREIVKQL 170
>sp|Q6G859|Y1797_STAAS Uncharacterized protein SAS1797 OS=Staphylococcus aureus (strain
MSSA476) GN=SAS1797 PE=3 SV=1
Length = 171
Score = 37.4 bits (85), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 141 ESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSE--IENRVVVDGNLITSR 198
+++ P AIC P ++++ L KG+ TA + LS+ ++ VVVD N++TSR
Sbjct: 96 KNDVPTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSR 154
Query: 199 GPGTSMEFALAIVEKF 214
P +F IV++
Sbjct: 155 VPDDLDDFNREIVKQL 170
>sp|P0A0K1|Y1692_STAAN Uncharacterized protein SA1692 OS=Staphylococcus aureus (strain
N315) GN=SA1692 PE=3 SV=1
Length = 171
Score = 37.4 bits (85), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 141 ESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSE--IENRVVVDGNLITSR 198
+++ P AIC P ++++ L KG+ TA + LS+ ++ VVVD N++TSR
Sbjct: 96 KNDVPTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSR 154
Query: 199 GPGTSMEFALAIVEKF 214
P +F IV++
Sbjct: 155 VPDDLDDFNREIVKQL 170
>sp|Q6GFI2|Y1965_STAAR Uncharacterized protein SAR1965 OS=Staphylococcus aureus (strain
MRSA252) GN=SAR1965 PE=3 SV=1
Length = 171
Score = 37.4 bits (85), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 141 ESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSE--IENRVVVDGNLITSR 198
+++ P AIC P ++++ L KG+ TA + LS+ ++ VVVD N++TSR
Sbjct: 96 KNDVPTFAICHGPQILIDTDDL-KGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSR 154
Query: 199 GPGTSMEFALAIVEKF 214
P +F IV++
Sbjct: 155 VPDDLDDFNREIVKQL 170
>sp|B3E6H6|RL9_GEOLS 50S ribosomal protein L9 OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=rplI PE=3 SV=1
Length = 147
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 43 LTTVAPGYFRNHLMPKLLAVPNIEKFAHLIREQRR 77
+ VAPGY RN+L+PK LA+ EK A + +R
Sbjct: 18 IVKVAPGYARNYLLPKGLAIEATEKNAKALEHAKR 52
>sp|A1AM21|RL9_PELPD 50S ribosomal protein L9 OS=Pelobacter propionicus (strain DSM
2379) GN=rplI PE=3 SV=1
Length = 151
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 43 LTTVAPGYFRNHLMPKLLAVPNIEKFAHLIREQRR 77
+ VAPGY RN+L+PK LAV EK A + +R
Sbjct: 18 IVKVAPGYARNYLLPKGLAVEATEKNAKALEHVKR 52
>sp|Q9HTH5|CDHR_PSEAE HTH-type transcriptional regulator CdhR OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=cdhR PE=1 SV=1
Length = 336
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 127 AKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKAT----AFPAMCNKLSDQS 182
A + LV L+K + G I ++VL GLL G++AT A A S
Sbjct: 82 AVTPALVQWLRKLDRNGVTLGGIDTG-SVVLAEAGLLDGRRATLHWEAIDAFQESYPQLS 140
Query: 183 EIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLL 229
+ +DG ITS G S++ L ++ + G A+++++ +L
Sbjct: 141 VTQELFEIDGPRITSAGGTASIDLMLDLIAQAHGPQLAVQVSEQFVL 187
>sp|Q4L7I2|Y1084_STAHJ Uncharacterized protein SH1084 OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH1084 PE=3 SV=1
Length = 172
Score = 35.4 bits (80), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 142 SNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSE--IENRVVVDGNLITSRG 199
++ P AIC P ++++ L G+ TA + LS+ ++ VVVD N++TSR
Sbjct: 97 NDVPAFAICHGPQILIDTDDL-NGRTLTAVLNVRKDLSNAGANVVDESVVVDKNIVTSRT 155
Query: 200 PGTSMEFALAIVEKF 214
P +F IV++
Sbjct: 156 PDDLDDFNREIVKQL 170
>sp|Q01QR6|RL9_SOLUE 50S ribosomal protein L9 OS=Solibacter usitatus (strain
Ellin6076) GN=rplI PE=3 SV=1
Length = 148
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 43 LTTVAPGYFRNHLMPKLLAVPNIEKFAHLIREQRR 77
L VAPGY RN L+PK +AV E ++ ++R+
Sbjct: 18 LVKVAPGYARNFLLPKRMAVAATEANRKIVEQERQ 52
>sp|Q7NHA5|RL9_GLOVI 50S ribosomal protein L9 OS=Gloeobacter violaceus (strain PCC
7421) GN=rplI PE=3 SV=1
Length = 153
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 43 LTTVAPGYFRNHLMPKLLAV---PNIEKFAHLIREQRR 77
L VAPGY RN+L+P+ LAV P + K A + +RR
Sbjct: 20 LVEVAPGYARNYLIPQGLAVKATPGLVKEAEFRQAKRR 57
>sp|B1WTN1|RL9_CYAA5 50S ribosomal protein L9 OS=Cyanothece sp. (strain ATCC 51142)
GN=rplI PE=3 SV=1
Length = 152
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 43 LTTVAPGYFRNHLMPK---LLAVPNIEKFAHLIREQRR 77
L VAPGY RN+L+P+ LA P I K RE+ R
Sbjct: 22 LVEVAPGYARNYLLPQKLATLATPGILKQVEQRREKER 59
>sp|Q9PAF9|RL9_XYLFA 50S ribosomal protein L9 OS=Xylella fastidiosa (strain 9a5c)
GN=rplI PE=3 SV=1
Length = 149
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 44 TTVAPGYFRNHLMPKLLAVPNIE 66
TV PGY RN L+PK +AVP E
Sbjct: 19 VTVKPGYGRNFLLPKGVAVPATE 41
>sp|B5EHW6|RL9_GEOBB 50S ribosomal protein L9 OS=Geobacter bemidjiensis (strain Bem /
ATCC BAA-1014 / DSM 16622) GN=rplI PE=3 SV=1
Length = 147
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 43 LTTVAPGYFRNHLMPKLLAVPNIEKFAHLIREQRR 77
+ VAPGY RN L+PK A+ EK A + +R
Sbjct: 18 IVKVAPGYARNFLLPKGFAIEATEKNAKALEHAKR 52
>sp|C6E506|RL9_GEOSM 50S ribosomal protein L9 OS=Geobacter sp. (strain M21) GN=rplI
PE=3 SV=1
Length = 147
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 43 LTTVAPGYFRNHLMPKLLAVPNIEKFAHLIREQRR 77
+ VAPGY RN L+PK A+ EK A + +R
Sbjct: 18 IVKVAPGYARNFLLPKGFAIEATEKNAKALEHAKR 52
>sp|Q74FE1|RL9_GEOSL 50S ribosomal protein L9 OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=rplI PE=3 SV=1
Length = 148
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 43 LTTVAPGYFRNHLMPKLLAVPNIEKFAHLIREQRR 77
+ VAPGY RN+L+P+ A+ EK A + +R
Sbjct: 18 IVKVAPGYARNYLIPRNFAIEATEKNAKALEHAKR 52
>sp|Q67J52|RL9_SYMTH 50S ribosomal protein L9 OS=Symbiobacterium thermophilum (strain T
/ IAM 14863) GN=rplI PE=3 SV=1
Length = 146
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 46 VAPGYFRNHLMPKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMS 102
VA GY RN+L+P+ LAV E I +R+ Q E+++ + E+ +R D +
Sbjct: 19 VADGYARNYLIPRGLAVAASEGALRSIEAERKA-QQEKQQRQVAELSALRDRLDGQT 74
>sp|P42352|RL9_SYNY3 50S ribosomal protein L9 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rplI PE=3 SV=2
Length = 152
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 7/50 (14%)
Query: 43 LTTVAPGYFRNHLMPK---LLAVPNIEKFAHLIREQRRIFQPEEEEEEEE 89
L VAPGY RN+L+PK ++A P I + EQRR+ + E + E++
Sbjct: 22 LVEVAPGYARNYLIPKGLGVVATPGILRQV----EQRRLKELERLKAEKD 67
>sp|A8GLX8|RL9_RICAH 50S ribosomal protein L9 OS=Rickettsia akari (strain Hartford)
GN=rplI PE=3 SV=1
Length = 171
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 46 VAPGYFRNHLMPKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEE 89
VA G+ RN+L+P+ LA+ E LI +Q+ F+ ++++ EE
Sbjct: 21 VADGFGRNYLLPQKLAIRATEPNKELIVKQKHEFEAKDKQIREE 64
>sp|A0LN56|RL9_SYNFM 50S ribosomal protein L9 OS=Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB) GN=rplI PE=3 SV=1
Length = 148
Score = 31.6 bits (70), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 43 LTTVAPGYFRNHLMPKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRK 96
+ VAPGY RN+L P+ LA+ K + ++R+ + E+ +E + V K
Sbjct: 18 VVNVAPGYARNYLFPQGLALEATGKNVKELDHRKRVLAAKREKIRQEMLSVAEK 71
>sp|Q9ZEA4|RL9_RICPR 50S ribosomal protein L9 OS=Rickettsia prowazekii (strain Madrid
E) GN=rplI PE=3 SV=1
Length = 171
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 46 VAPGYFRNHLMPKLLAVPNIEKFAHLIREQRRIFQPEEEE--EEEEEVRVIRKSE 98
VA G+ RN+L+P+ LA+ + LI +Q+ F+ ++++ EE E++ I K +
Sbjct: 21 VADGFGRNYLLPQKLAIRATKSNKELIVKQKYEFEEKDKQVREEVEKINTIIKDQ 75
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,327,908
Number of Sequences: 539616
Number of extensions: 3383657
Number of successful extensions: 26676
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 212
Number of HSP's that attempted gapping in prelim test: 25757
Number of HSP's gapped (non-prelim): 935
length of query: 232
length of database: 191,569,459
effective HSP length: 114
effective length of query: 118
effective length of database: 130,053,235
effective search space: 15346281730
effective search space used: 15346281730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)