Query 026831
Match_columns 232
No_of_seqs 175 out of 2060
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 23:17:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026831.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026831hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3noq_A THIJ/PFPI family protei 100.0 1.1E-37 3.7E-42 264.3 15.6 180 38-231 4-186 (231)
2 3ewn_A THIJ/PFPI family protei 100.0 2.3E-37 7.9E-42 265.7 17.7 183 36-231 20-206 (253)
3 3mgk_A Intracellular protease/ 100.0 1.4E-37 4.6E-42 260.3 13.7 182 36-231 1-189 (211)
4 4e08_A DJ-1 beta; flavodoxin-l 100.0 5.4E-37 1.9E-41 252.0 16.5 180 38-231 4-189 (190)
5 2rk3_A Protein DJ-1; parkinson 100.0 1.3E-36 4.3E-41 251.1 17.3 180 39-231 3-189 (197)
6 3er6_A Putative transcriptiona 100.0 2.8E-37 9.7E-42 257.9 11.4 181 37-231 6-200 (209)
7 4gdh_A DJ-1, uncharacterized p 100.0 4.1E-36 1.4E-40 248.2 15.2 181 38-230 3-194 (194)
8 3gra_A Transcriptional regulat 100.0 4.5E-37 1.5E-41 255.4 8.7 177 38-231 4-192 (202)
9 3ot1_A 4-methyl-5(B-hydroxyeth 100.0 8.1E-36 2.8E-40 248.7 15.8 179 39-230 9-193 (208)
10 2ab0_A YAJL; DJ-1/THIJ superfa 100.0 5.3E-35 1.8E-39 243.2 15.8 182 39-230 2-188 (205)
11 3bhn_A THIJ/PFPI domain protei 100.0 4.4E-35 1.5E-39 249.1 14.1 176 39-231 20-201 (236)
12 3efe_A THIJ/PFPI family protei 100.0 3.2E-34 1.1E-38 239.8 12.0 175 39-230 5-195 (212)
13 3l18_A Intracellular protease 100.0 1.8E-33 6.2E-38 226.2 12.0 162 39-215 2-168 (168)
14 2vrn_A Protease I, DR1199; cys 100.0 1.7E-33 5.7E-38 230.7 11.2 173 38-221 8-188 (190)
15 2fex_A Conserved hypothetical 100.0 5E-33 1.7E-37 227.9 11.1 173 39-230 1-183 (188)
16 4hcj_A THIJ/PFPI domain protei 100.0 1.2E-32 4E-37 224.7 12.0 166 36-216 4-175 (177)
17 3f5d_A Protein YDEA; unknow pr 100.0 9.1E-33 3.1E-37 230.3 10.7 171 39-230 3-182 (206)
18 1oi4_A Hypothetical protein YH 100.0 1.2E-31 4.1E-36 220.9 15.2 165 36-215 20-192 (193)
19 3fse_A Two-domain protein cont 100.0 8.7E-33 3E-37 247.9 8.1 174 38-226 9-189 (365)
20 3cne_A Putative protease I; st 100.0 6.9E-31 2.4E-35 212.6 10.7 157 39-214 2-174 (175)
21 1u9c_A APC35852; structural ge 100.0 6.4E-30 2.2E-34 214.6 10.7 167 40-217 6-223 (224)
22 3uk7_A Class I glutamine amido 100.0 6.5E-28 2.2E-32 218.5 14.4 171 36-218 9-201 (396)
23 1n57_A Chaperone HSP31, protei 99.9 8.6E-28 2.9E-32 210.0 13.6 171 39-220 48-283 (291)
24 3uk7_A Class I glutamine amido 99.9 9.8E-28 3.4E-32 217.3 12.7 169 37-217 203-393 (396)
25 1rw7_A YDR533CP; alpha-beta sa 99.9 2.3E-27 7.7E-32 202.1 11.1 168 39-216 3-237 (243)
26 3kkl_A Probable chaperone prot 99.9 8.3E-26 2.8E-30 192.8 12.5 170 39-218 3-239 (244)
27 1vhq_A Enhancing lycopene bios 99.9 3E-26 1E-30 193.7 7.3 172 39-227 6-221 (232)
28 3n7t_A Macrophage binding prot 99.9 4.5E-25 1.5E-29 188.5 11.5 168 39-216 9-243 (247)
29 3l3b_A ES1 family protein; ssg 99.9 1.3E-23 4.4E-28 179.0 7.1 165 39-218 23-229 (242)
30 1sy7_A Catalase 1; heme oxidat 99.7 6.6E-18 2.3E-22 162.3 9.3 148 39-215 534-697 (715)
31 3ttv_A Catalase HPII; heme ori 99.5 2.9E-14 9.9E-19 136.5 7.0 110 38-163 599-711 (753)
32 2iuf_A Catalase; oxidoreductas 99.1 1.5E-10 5.2E-15 110.4 6.6 103 39-164 529-652 (688)
33 3ej6_A Catalase-3; heme, hydro 98.9 1.9E-09 6.6E-14 102.7 5.9 103 38-163 536-649 (688)
34 3d54_D Phosphoribosylformylgly 98.5 1.9E-08 6.6E-13 82.6 0.9 57 110-167 41-102 (213)
35 2abw_A PDX2 protein, glutamina 97.1 0.00067 2.3E-08 56.0 6.2 54 106-160 39-96 (227)
36 2nv0_A Glutamine amidotransfer 97.1 0.00031 1E-08 56.6 3.3 52 108-160 36-88 (196)
37 2iss_D Glutamine amidotransfer 96.9 0.00037 1.3E-08 56.9 2.9 51 109-160 56-107 (208)
38 1q7r_A Predicted amidotransfer 96.9 0.00037 1.3E-08 57.4 2.8 51 109-160 59-110 (219)
39 3ugj_A Phosphoribosylformylgly 96.9 0.0012 4.1E-08 67.4 6.2 100 38-166 1046-1159(1303)
40 2ywd_A Glutamine amidotransfer 96.5 0.0011 3.7E-08 52.9 2.6 51 109-160 38-90 (191)
41 4gud_A Imidazole glycerol phos 96.3 0.0019 6.7E-08 52.4 3.0 53 106-160 36-88 (211)
42 1ka9_H Imidazole glycerol phos 95.9 0.0026 9E-08 51.3 1.8 50 110-160 40-91 (200)
43 3l7n_A Putative uncharacterize 95.9 0.0059 2E-07 50.7 3.9 50 110-160 45-100 (236)
44 3l4e_A Uncharacterized peptida 95.8 0.0088 3E-07 48.9 4.5 53 106-159 75-128 (206)
45 1fy2_A Aspartyl dipeptidase; s 95.6 0.0071 2.4E-07 50.2 3.4 53 106-159 75-128 (229)
46 1wl8_A GMP synthase [glutamine 95.4 0.0093 3.2E-07 47.5 3.3 45 111-160 44-88 (189)
47 1o1y_A Conserved hypothetical 95.2 0.0088 3E-07 49.8 2.7 50 110-160 57-109 (239)
48 2v4u_A CTP synthase 2; pyrimid 95.0 0.022 7.5E-07 48.9 4.7 47 108-159 88-134 (289)
49 3m3p_A Glutamine amido transfe 95.0 0.014 4.8E-07 49.1 3.2 50 110-160 48-98 (250)
50 2ywj_A Glutamine amidotransfer 94.9 0.02 6.7E-07 45.4 3.7 47 110-160 37-84 (186)
51 1qdl_B Protein (anthranilate s 94.8 0.015 5.1E-07 46.7 2.9 48 111-160 46-93 (195)
52 1gpw_B Amidotransferase HISH; 94.7 0.017 5.8E-07 46.4 2.9 50 110-161 42-94 (201)
53 3fij_A LIN1909 protein; 11172J 94.4 0.033 1.1E-06 46.7 4.1 51 109-160 60-124 (254)
54 2a9v_A GMP synthase; structura 93.7 0.032 1.1E-06 45.5 2.6 47 110-160 54-101 (212)
55 1a9x_B Carbamoyl phosphate syn 93.4 0.07 2.4E-06 47.6 4.6 46 111-160 232-277 (379)
56 2w7t_A CTP synthetase, putativ 93.3 0.068 2.3E-06 45.3 4.2 47 108-159 65-111 (273)
57 1l9x_A Gamma-glutamyl hydrolas 92.4 0.18 6.1E-06 43.6 5.6 50 110-160 86-140 (315)
58 3nva_A CTP synthase; rossman f 89.6 0.16 5.6E-06 47.1 2.7 47 108-159 348-394 (535)
59 1jvn_A Glutamine, bifunctional 88.8 0.19 6.4E-06 47.0 2.5 50 110-160 44-95 (555)
60 1vco_A CTP synthetase; tetrame 87.4 0.49 1.7E-05 44.2 4.4 47 109-160 354-400 (550)
61 3en0_A Cyanophycinase; serine 87.3 0.67 2.3E-05 39.7 4.9 70 107-177 107-200 (291)
62 1s1m_A CTP synthase; CTP synth 86.6 0.51 1.7E-05 44.0 4.0 45 110-159 343-387 (545)
63 2vpi_A GMP synthase; guanine m 85.9 0.17 6E-06 41.3 0.4 46 110-160 67-112 (218)
64 3uow_A GMP synthetase; structu 84.8 0.29 9.9E-06 45.7 1.4 49 110-160 50-99 (556)
65 3r75_A Anthranilate/para-amino 82.5 0.67 2.3E-05 44.1 2.9 49 110-160 486-537 (645)
66 1i1q_B Anthranilate synthase c 82.0 0.6 2E-05 36.9 2.0 42 114-160 51-92 (192)
67 2vdj_A Homoserine O-succinyltr 71.8 1.5 5.2E-05 37.7 1.8 55 104-158 91-150 (301)
68 3tqi_A GMP synthase [glutamine 70.8 0.77 2.6E-05 42.5 -0.3 45 111-160 54-98 (527)
69 2h2w_A Homoserine O-succinyltr 63.9 2.4 8.3E-05 36.6 1.5 48 111-158 112-162 (312)
70 1gpm_A GMP synthetase, XMP ami 60.6 1.4 4.8E-05 40.7 -0.7 45 111-160 51-95 (525)
71 2ywb_A GMP synthase [glutamine 57.5 1.5 5.3E-05 40.1 -1.0 45 111-160 43-87 (503)
72 2vxo_A GMP synthase [glutamine 48.2 3.3 0.00011 39.6 -0.4 46 110-160 72-117 (697)
73 2r47_A Uncharacterized protein 38.7 9.2 0.00031 29.6 0.8 105 39-161 26-133 (157)
74 3jx9_A Putative phosphoheptose 21.3 64 0.0022 24.9 3.0 39 107-151 74-112 (170)
75 1tk9_A Phosphoheptose isomeras 20.9 92 0.0032 23.3 3.9 37 110-152 110-146 (188)
No 1
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=100.00 E-value=1.1e-37 Score=264.35 Aligned_cols=180 Identities=23% Similarity=0.285 Sum_probs=161.7
Q ss_pred CccEEEEEecCCccccccc-chhhhccCCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhhhccceec
Q 026831 38 RLEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAARRLENAR 116 (232)
Q Consensus 38 ~~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~~~d~liv 116 (232)
.+++|+||+||||+++|+. |.+++....+..+.+++.+++ ++.++ .|+.+. ++..++++++.|.|||
T Consensus 4 m~~~V~ill~~gf~~~e~~~p~evl~~~~~~~v~~vs~~~~---~V~~~---~G~~v~------~d~~l~~~~~~D~liv 71 (231)
T 3noq_A 4 MAVQIGFLLFPEVQQLDLTGPHDVLASLPDVQVHLIWKEPG---PVVAS---SGLVLQ------ATTSFADCPPLDVICI 71 (231)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTSTTEEEEEEESSSE---EEECT---TSCEEE------ECEETTTCCCCSEEEE
T ss_pred CcEEEEEEEeCCCcHHHHHHHHHHHHcCCCCEEEEEECCCC---cEEcC---CCCEEe------cccChhHCCcCCEEEE
Confidence 4579999999999999999 999995446778899999887 77665 499999 9988988877888999
Q ss_pred cCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccC--ccCCCcEEEcCCE
Q 026831 117 LGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQ--SEIENRVVVDGNL 194 (232)
Q Consensus 117 pGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~--~~~d~~~v~Dg~~ 194 (232)
|||. +...+..++++++|||++++++++|++||+|+ ++|+++|||+||++|+||...+.|++. .+.++.+|+|||+
T Consensus 72 pGG~-g~~~~~~~~~l~~~lr~~~~~g~~v~aiC~G~-~~La~aGLL~Gr~aTthw~~~~~l~~~~~~~~~~~vV~Dg~i 149 (231)
T 3noq_A 72 PGGT-GVGALMEDPQALAFIRQQAARARYVTSVSTGS-LVLGAAGLLQGKRATTHWAYHELLAPLGAIPVHERVVRDGNL 149 (231)
T ss_dssp CCST-THHHHTTCHHHHHHHHHHHTTCSEEEEETTHH-HHHHHTTTTTTCEECCCGGGGGGTGGGTCEECCSSEEEETTE
T ss_pred CCCC-ChhhhccCHHHHHHHHHHHhcCCEEEEECHHH-HHHHHcCCCCCceeeecHhHHHHHHhCCCeeeCCcEEEeCCE
Confidence 9997 46667789999999999999999999999995 889999999999999999999988752 3568899999999
Q ss_pred EEcCChhhHHHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 026831 195 ITSRGPGTSMEFALAIVEKFFGRNKALELAKILLLSC 231 (232)
Q Consensus 195 iTa~g~~a~~d~~l~lI~~~~G~~~a~~va~~l~~~~ 231 (232)
|||+|+++++||+++||++++|++.|++|++.|+|+.
T Consensus 150 iTs~G~~a~~d~aL~li~~~~G~~~A~~va~~l~~~~ 186 (231)
T 3noq_A 150 LTGGGITAGIDFALTLAAELFDAATAQRVQLQLEYAP 186 (231)
T ss_dssp EEECSTTHHHHHHHHHHHHHSCHHHHHHHHHHTTCCC
T ss_pred EECCCHHHHHHHHHHHHHHHcCHHHHHHHHHhceeCC
Confidence 9999999999999999999999999999999999873
No 2
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=100.00 E-value=2.3e-37 Score=265.70 Aligned_cols=183 Identities=22% Similarity=0.271 Sum_probs=162.9
Q ss_pred CCCccEEEEEecCCccccccc-chhhhccCCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhhhc-cc
Q 026831 36 YRRLEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAARR-LE 113 (232)
Q Consensus 36 ~~~~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~~~-d~ 113 (232)
|..+++|+||+||||+++|+. |.+++....+..+.+++.+++ ++.++ .|+.+. ++..+++++.. |.
T Consensus 20 ~~m~~~I~ill~~gf~~~e~~~p~dvl~~~~~~~v~~vs~~~~---~V~~~---~G~~i~------~d~~l~~~~~~yD~ 87 (253)
T 3ewn_A 20 WMGDEQIAMLVYPGMTVMDLVGPHCMFGSLMGAKIYIVAKSLD---PVTSD---AGLAIV------PTATFGTCPRDLTV 87 (253)
T ss_dssp CCCCCEEEEECCTTBCHHHHHHHHHHHTTSTTCEEEEEESSSS---CEECT---TSCEEC------CSEETTTSCSSCSE
T ss_pred cCCCeEEEEEeCCCCcHHHHHHHHHHHHhCCCCEEEEEeCCCC---eEEcC---CCCEEe------CCcCHHHcCCCCCE
Confidence 445689999999999999999 999986566788999999887 77765 499999 99889887654 77
Q ss_pred eeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccC--ccCCCcEEEc
Q 026831 114 NARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQ--SEIENRVVVD 191 (232)
Q Consensus 114 livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~--~~~d~~~v~D 191 (232)
||||||..+...+..++++++|||++++++++|++||+|+ ++|+++|||+||++|+||...+.|++. .+.++.+|+|
T Consensus 88 liVPGG~~g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG~-~lLa~AGLL~Gr~aTthw~~~~~l~~~~~~~~~~~vV~D 166 (253)
T 3ewn_A 88 LFAPGGTDGTLAAASDAETLAFMADRGARAKYITSVCSGS-LILGAAGLLKGYKATSHWSCRDALAGFGAIPTEARVVRD 166 (253)
T ss_dssp EEECCBSHHHHHHTTCHHHHHHHHHHHTTCSEEEEETTHH-HHHHHTTCCTTCEECCCTTTGGGGGGGTCEECCSSEEEE
T ss_pred EEECCCccchhhhccCHHHHHHHHHHHHcCCEEEEEChHH-HHHHHcCCCCCCEEecCHHHHHHHHhCCCeeeCCcEEEE
Confidence 9999997235567789999999999999999999999995 889999999999999999999999852 3568899999
Q ss_pred CCEEEcCChhhHHHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 026831 192 GNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLLSC 231 (232)
Q Consensus 192 g~~iTa~g~~a~~d~~l~lI~~~~G~~~a~~va~~l~~~~ 231 (232)
||+|||+|+++++||+++||++++|+++|++|++.|+|+.
T Consensus 167 g~iiTs~G~~a~idlaL~lv~~l~G~~~A~~va~~l~~~~ 206 (253)
T 3ewn_A 167 RNRITGAGVTAGLDFGLSMVAELRDQTYAECAQLMSEYDP 206 (253)
T ss_dssp TTEEEECSTTHHHHHHHHHHHHHSCHHHHHHHHHHTTCCC
T ss_pred CCEEECCCHHHHHHHHHHHHHHHcCHHHHHHHHHhcccCC
Confidence 9999999999999999999999999999999999999874
No 3
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.4e-37 Score=260.28 Aligned_cols=182 Identities=20% Similarity=0.242 Sum_probs=158.6
Q ss_pred CCCccEEEEEecCCccccccc-chhhhccCC-CceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhhhccc
Q 026831 36 YRRLEVILTTVAPGYFRNHLM-PKLLAVPNI-EKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAARRLE 113 (232)
Q Consensus 36 ~~~~~~I~iLl~~gf~~~el~-p~~~a~~~~-~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~~~d~ 113 (232)
|.++++|+||++|||+++|+. |.+++.... +..+.+++.+++ ++.++ .|+++. ++..++++++.|.
T Consensus 1 m~~~~~V~ill~~g~~~~e~~~~~~~l~~a~~~~~v~~vs~~~~---~V~~~---~G~~v~------~d~~~~~~~~~D~ 68 (211)
T 3mgk_A 1 MSLSYRIDVLLFNKFETLDVFGPVEIFGNLQDDFELNFISSDGG---LVESS---QKVRVE------TSLYTRDENIEKI 68 (211)
T ss_dssp ---CEEEEEECCTTCCHHHHHHHHHHHTTCTTTEEEEEECSSCE---EEECT---TCCEEE------EBCCCCCSSSEEE
T ss_pred CCCceEEEEEEeCCcchhHHHHHHHHHHhCCCceEEEEEECCCC---eEecC---CCcEEE------eccchhhCCCCCE
Confidence 346789999999999999999 888884332 467889998877 77665 499999 8888887766788
Q ss_pred eeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccCc----c-CCCcE
Q 026831 114 NARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQS----E-IENRV 188 (232)
Q Consensus 114 livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~~----~-~d~~~ 188 (232)
||||||. +...+..++++++|||++++++++|++||+|+ ++|+++|||+||++|+||...+.|++.+ + .++.+
T Consensus 69 livpGG~-~~~~~~~~~~~~~~l~~~~~~~k~iaaiC~G~-~~La~aGLL~Gr~~Tth~~~~~~l~~~~p~~~~~~~~~~ 146 (211)
T 3mgk_A 69 LFVPGGS-GTREKVNDDNFINFIGNMVKESKYIISVCTGS-ALLSKAGILNGKRATTNKRSFKWVTEQNEDVLWVKEARW 146 (211)
T ss_dssp EEECCST-HHHHHTTCHHHHHHHHHHHHHCSEEEECTTHH-HHHHHTTTTTTSEECCCSTTHHHHHTTCTTSEECSSCSE
T ss_pred EEECCCc-chhhhcCCHHHHHHHHHHHHcCCEEEEEchHH-HHHHhcCCcCCCeEeeChhHHHHHHHHCCCcEEecCCeE
Confidence 9999997 45556789999999999999999999999996 7899999999999999999999998752 3 47899
Q ss_pred EEcCCEEEcCChhhHHHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 026831 189 VVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLLSC 231 (232)
Q Consensus 189 v~Dg~~iTa~g~~a~~d~~l~lI~~~~G~~~a~~va~~l~~~~ 231 (232)
|+|||+|||+|+++++||+++||++++|+++|++|++.|+++.
T Consensus 147 v~Dg~iiTs~G~~a~~dlal~lv~~~~G~~~A~~va~~l~~~~ 189 (211)
T 3mgk_A 147 VKDGNIYTSSGVSAGIDMTLGFIEDLIGKEKALEISRSIEYFW 189 (211)
T ss_dssp EEETTEEEECSHHHHHHHHHHHHHHHHCHHHHHHHHHHHTCCC
T ss_pred EEeCCEEECCCHHHHHHHHHHHHHHHhCHHHHHHHHHhcEECC
Confidence 9999999999999999999999999999999999999999873
No 4
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=100.00 E-value=5.4e-37 Score=251.98 Aligned_cols=180 Identities=32% Similarity=0.474 Sum_probs=160.2
Q ss_pred CccEEEEEecCCccccccc-chhhhccCCCceEEEEeccc-cccCCccccccccceEEeeccCCccchhHHHhh--hccc
Q 026831 38 RLEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQR-RIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAA--RRLE 113 (232)
Q Consensus 38 ~~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~-~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~--~~d~ 113 (232)
.+++|+|+++|||++.|+. |.+++ ...+..+.+++.++ + |+.++ .|+++. ++..+++++ +.|.
T Consensus 4 m~kkv~ill~~g~~~~e~~~~~~~l-~~ag~~v~~~s~~~~~---~v~~~---~g~~i~------~d~~l~~~~~~~~D~ 70 (190)
T 4e08_A 4 MSKSALVILAPGAEEMEFIIAADVL-RRAGIKVTVAGLNGGE---AVKCS---RDVQIL------PDTSLAQVASDKFDV 70 (190)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEESSSSS---CEECT---TSCEEE------CSEETGGGTTCCCSE
T ss_pred CCcEEEEEECCCchHHHHHHHHHHH-HHCCCEEEEEECCCCc---ceecC---CCcEEE------CCCCHHHCCcccCCE
Confidence 3579999999999999999 88888 55678899999887 5 66665 499999 999998875 3577
Q ss_pred eeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccC-ccC-CCcEEEc
Q 026831 114 NARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQ-SEI-ENRVVVD 191 (232)
Q Consensus 114 livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~-~~~-d~~~v~D 191 (232)
||||||.++...+..++++++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.|++. .+. ++.+|+|
T Consensus 71 livpGG~~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~-~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~~~v~d 149 (190)
T 4e08_A 71 VVLPGGLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAP-TVLAKHGVASGKSLTSYPSMKPQLVNNYSYVDDKTVVKD 149 (190)
T ss_dssp EEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTH-HHHHHTTCSTTCEECCCGGGGGGSSSSSEECSSCSEEEE
T ss_pred EEECCCChHHHHhhhCHHHHHHHHHHHHCCCEEEEECHHH-HHHHHCCCcCCCeEEeCcCHHHHHhcCCcccCCCcEEEE
Confidence 9999996445567789999999999999999999999996 789999999999999999999999884 344 5899999
Q ss_pred CCEEEcCChhhHHHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 026831 192 GNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLLSC 231 (232)
Q Consensus 192 g~~iTa~g~~a~~d~~l~lI~~~~G~~~a~~va~~l~~~~ 231 (232)
||+|||+|+.+++||++++|++++|+++|++|++.|+++.
T Consensus 150 g~iiTs~g~~a~~d~al~li~~~~g~~~a~~va~~l~~~~ 189 (190)
T 4e08_A 150 GNLITSRGPGTAYEFALKIAEELAGKEKVQEVAKGLLVAY 189 (190)
T ss_dssp TTEEEECSGGGHHHHHHHHHHHHHCHHHHHHHHHHHTCCC
T ss_pred CCEEECCChHHHHHHHHHHHHHhcCHHHHHHHHHhhCccc
Confidence 9999999999999999999999999999999999999874
No 5
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=100.00 E-value=1.3e-36 Score=251.14 Aligned_cols=180 Identities=30% Similarity=0.357 Sum_probs=158.3
Q ss_pred ccEEEEEecCCccccccc-chhhhccCCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHh---hhccce
Q 026831 39 LEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKA---ARRLEN 114 (232)
Q Consensus 39 ~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~---~~~d~l 114 (232)
+++|+||++|||++.|+. |.+++ ...+..+.+++.+++ .++.++ .|+++. ++..++++ ++.|.|
T Consensus 3 ~~~v~ill~~g~~~~e~~~~~~~l-~~ag~~v~~vs~~~~--~~v~~~---~g~~v~------~d~~l~~~~~~~~~D~l 70 (197)
T 2rk3_A 3 SKRALVILAKGAEEMETVIPVDVM-RRAGIKVTVAGLAGK--DPVQCS---RDVVIC------PDASLEDAKKEGPYDVV 70 (197)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEETTCS--SCEECT---TSCEEC------CSEEHHHHHTTCCCSEE
T ss_pred CCEEEEEECCCCcHHHHHHHHHHH-HHCCCEEEEEEcCCC--CccccC---CCCEEe------CCcCHHHcCCccCCCEE
Confidence 468999999999999999 88888 555788889988764 156554 599999 99899887 467889
Q ss_pred eccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccCc---cCCCcEEEc
Q 026831 115 ARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQS---EIENRVVVD 191 (232)
Q Consensus 115 ivpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~~---~~d~~~v~D 191 (232)
|||||.++...+..++++++|||++++++++|++||+|+ ++|+++|||+||++|+||...+.|++.. +.+..+|+|
T Consensus 71 ivpGG~~~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~G~-~~La~aGll~G~~~T~~~~~~~~l~~~~~~~~~~~~~v~D 149 (197)
T 2rk3_A 71 VLPGGNLGAQNLSESAAVKEILKEQENRKGLIATICAGP-TALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKD 149 (197)
T ss_dssp EECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTH-HHHHHTTCSTTCEECCCGGGHHHHTTTSCSEECCCSEEEE
T ss_pred EECCCchhHHHhhhCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHCCCCCCCEEEeCCcHHHHHhhcCCceeCCCCEEEe
Confidence 999997445556789999999999999999999999996 7899999999999999999999998642 678999999
Q ss_pred CCEEEcCChhhHHHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 026831 192 GNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLLSC 231 (232)
Q Consensus 192 g~~iTa~g~~a~~d~~l~lI~~~~G~~~a~~va~~l~~~~ 231 (232)
||+|||+|+.+++|+++++|++++|++.|++|++.|++++
T Consensus 150 g~iiTs~g~~a~~d~al~li~~l~g~~~a~~va~~~~~~~ 189 (197)
T 2rk3_A 150 GLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVLKD 189 (197)
T ss_dssp TTEEEECSGGGHHHHHHHHHHHHHCHHHHHHHHGGGTC--
T ss_pred CCEEECCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999876
No 6
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.8e-37 Score=257.90 Aligned_cols=181 Identities=15% Similarity=0.162 Sum_probs=154.8
Q ss_pred CCccEEEEEecCCccccccc-chhhhcc------CCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhh
Q 026831 37 RRLEVILTTVAPGYFRNHLM-PKLLAVP------NIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAA 109 (232)
Q Consensus 37 ~~~~~I~iLl~~gf~~~el~-p~~~a~~------~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~ 109 (232)
.++++|+||+||||+++|+. |.+++.. ..+..+.+++.+++ |+.++ .|+++. ++..+++++
T Consensus 6 ~~~~~v~ill~~g~~~~e~~~~~d~l~~a~~~~~~~~~~v~~vs~~~~---~v~~~---~G~~v~------~d~~~~~~~ 73 (209)
T 3er6_A 6 KKNLRVVALAPTGRYFASIISSLEILETAAEFAEFQGFMTHVVTPNNR---PLIGR---GGISVQ------PTAQWQSFD 73 (209)
T ss_dssp -CCEEEEEECCCTTSCHHHHHHHHHHHHHHHHTTCSCEEEEEECTTSS---CEEET---TTEEEE------CSSCGGGCS
T ss_pred CCCeEEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEEeCCCC---ceecC---CCeEEe------CCcCccccC
Confidence 35789999999999999999 7776631 12356888888876 77765 499999 999998887
Q ss_pred hccceeccCChhhHHh--hhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccC----cc
Q 026831 110 RRLENARLGGLGGAQA--FAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQ----SE 183 (232)
Q Consensus 110 ~~d~livpGg~~~~~~--~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~----~~ 183 (232)
+.|.||||||.. ... +..++++++|||++++++++|++||+|+ ++||++|||+||++|+||...+.|++. .+
T Consensus 74 ~~D~livpGg~~-~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~-~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~ 151 (209)
T 3er6_A 74 FTNILIIGSIGD-PLESLDKIDPALFDWIRELHLKGSKIVAIDTGI-FVVAKAGLLQQNKAVMHSYFAHLFGELFPEIML 151 (209)
T ss_dssp CCSEEEECCCSC-HHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHH-HHHHHHTCCSSCEECCCHHHHHHHHHHCTTSEE
T ss_pred CCCEEEECCCCC-chhhhccCCHHHHHHHHHHHhcCCEEEEEcHHH-HHHHHcCCCCCCeeEECHHHHHHHHHHCCCcEE
Confidence 788899999973 332 2579999999999999999999999996 889999999999999999999988763 34
Q ss_pred C-CCcEEEcCCEEEcCChhhHHHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 026831 184 I-ENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLLSC 231 (232)
Q Consensus 184 ~-d~~~v~Dg~~iTa~g~~a~~d~~l~lI~~~~G~~~a~~va~~l~~~~ 231 (232)
. +..+|+|||+|||+|+++++||+++||++++|+++|++|++.|+++.
T Consensus 152 ~~~~~~v~Dg~iiTs~G~~a~~dlal~li~~~~G~~~A~~va~~l~~~~ 200 (209)
T 3er6_A 152 MTEQKALIDGNVYLSSGPYSHSSVMLEIVEEYFGKHTRNLGNQFLSTIE 200 (209)
T ss_dssp CTTCSEEEETTEEEECCSSCCHHHHHHHHHHHHCHHHHHHHHHHTTC--
T ss_pred ecCCEEEEeCCEEECCcHHHHHHHHHHHHHHHhCHHHHHHHHHHhccCc
Confidence 3 45799999999999999999999999999999999999999999864
No 7
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=100.00 E-value=4.1e-36 Score=248.22 Aligned_cols=181 Identities=23% Similarity=0.275 Sum_probs=151.6
Q ss_pred CccEEEEEecCCccccccc-chhhhccCCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhh-------
Q 026831 38 RLEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAA------- 109 (232)
Q Consensus 38 ~~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~------- 109 (232)
.|+||+|+++|||+++|+. |.+++ ...+..+.+++....--.++.++ .|+++. ++..+++++
T Consensus 3 ~M~kV~ill~dGfe~~E~~~p~~vl-~~ag~~v~~~s~~~~~~~~v~~~---~g~~v~------~d~~~~~~~~~d~~~~ 72 (194)
T 4gdh_A 3 HMVKVCLFVADGTDEIEFSAPWGIF-KRAEIPIDSVYVGENKDRLVKMS---RDVEMY------ANRSYKEIPSADDFAK 72 (194)
T ss_dssp --CCEEEEEETTCCHHHHHHHHHHH-HHTTCCEEEEEESSCTTCEEECT---TSCEEE------CSEEGGGSCCHHHHHH
T ss_pred CCCEEEEEECCCcCHHHHHHHHHHH-HHCCCeEEEEEEcCCCCceEecC---CCceee------ccccHhhCCccccccc
Confidence 5789999999999999999 99988 55576676666543311134443 599998 777766542
Q ss_pred hccceeccCChhhHHhhhcCHHHHHHHHHHHhC-CCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccC--ccCCC
Q 026831 110 RRLENARLGGLGGAQAFAKSEKLVNMLKKQKES-NRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQ--SEIEN 186 (232)
Q Consensus 110 ~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~-g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~--~~~d~ 186 (232)
+.|.|+||||.++.+.+..++.+++|||+++++ ++++++||+|+ + |+++|+|+||++|+||...+.+++. .+.++
T Consensus 73 ~yD~lvvPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~-~-l~~aglL~gr~~T~~~~~~~~l~~~g~~~~d~ 150 (194)
T 4gdh_A 73 QYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGT-L-TAKTSGLPNKQITGHPSVRGQLEEGGYKYLDQ 150 (194)
T ss_dssp HCSEEEECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGG-H-HHHHTTCCCSEECCCGGGHHHHHHTTCEECCS
T ss_pred cCCEEEECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeecccc-c-chhhceecCCceEecCcHHHHHHhcCCeeecc
Confidence 357799999976677788999999999999865 78999999995 4 8889999999999999999999874 57899
Q ss_pred cEEEcCCEEEcCChhhHHHHHHHHHHHhcCHHHHHHHHHhhccc
Q 026831 187 RVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLLS 230 (232)
Q Consensus 187 ~~v~Dg~~iTa~g~~a~~d~~l~lI~~~~G~~~a~~va~~l~~~ 230 (232)
++|+|||+|||+|+.+++||+++||++++|++.|++|++.|+|+
T Consensus 151 ~vV~Dg~iiTs~g~~~~~d~al~lve~l~G~~~a~~va~~l~~P 194 (194)
T 4gdh_A 151 PVVLEENLITSQGPGTAMLFGLKLLEQVASKDKYNAVYKSLSMP 194 (194)
T ss_dssp SEEEETTEEEECSGGGHHHHHHHHHHHHSCHHHHHHHHHHTTCC
T ss_pred eEEEcCCEEECCCHhHHHHHHHHHHHHHcCHHHHHHHHhhccCC
Confidence 99999999999999999999999999999999999999999985
No 8
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=100.00 E-value=4.5e-37 Score=255.43 Aligned_cols=177 Identities=15% Similarity=0.156 Sum_probs=150.0
Q ss_pred CccEEEEEecCCccccccc-chhhhccC---C--CceEEEEeccccccCCccccccccceEEeeccCCccchhHHHh--h
Q 026831 38 RLEVILTTVAPGYFRNHLM-PKLLAVPN---I--EKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKA--A 109 (232)
Q Consensus 38 ~~~~I~iLl~~gf~~~el~-p~~~a~~~---~--~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~--~ 109 (232)
++++|+||+||||+++|+. |.+++... . +..+.+++.+++ ++.++ .|+++. ++ .++++ +
T Consensus 4 ~~~~v~ill~~g~~~~e~~~~~dvl~~a~~~~~~~~~v~~vs~~~~---~v~~~---~G~~i~------~d-~l~~~~~~ 70 (202)
T 3gra_A 4 APYRVDFILLEHFSMASFTVAMDVLVTANLLRADSFQFTPLSLDGD---RVLSD---LGLELV------AT-ELSAAALK 70 (202)
T ss_dssp -CEEEEEEECTTBCHHHHHHHHHHHHHHHHHSTTSEEEEEEESSSS---EEEBT---TSCEEE------CE-ECCSGGGT
T ss_pred CcEEEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC---ceEcC---CCCEEE------CC-CcccccCC
Confidence 4679999999999999999 77776211 1 256888998876 77765 499999 88 88873 4
Q ss_pred hccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccC----ccCC
Q 026831 110 RRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQ----SEIE 185 (232)
Q Consensus 110 ~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~----~~~d 185 (232)
+.|.||||||.+ ... .. +++++|||++++++++|++||+|+ ++||++|||+||++|+||...+.|++. .+.+
T Consensus 71 ~~D~livpGG~~-~~~-~~-~~l~~~l~~~~~~g~~iaaIC~G~-~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~~~ 146 (202)
T 3gra_A 71 ELDLLVVCGGLR-TPL-KY-PELDRLLNDCAAHGMALGGLWNGA-WFLGRAGVLDDYGCSIHPEQRASLSERSPQTRITP 146 (202)
T ss_dssp TCSEEEEECCTT-CCS-CC-TTHHHHHHHHHHHTCEEEEETTHH-HHHHHHTCCTTEEECCCGGGHHHHHHHCTTEEECS
T ss_pred CCCEEEEeCCCc-hhh-cc-HHHHHHHHHHHhhCCEEEEECHHH-HHHHHcCCcCCCcEEeChhHHHHHHHHCCCCEecC
Confidence 678899999974 322 24 899999999999999999999996 889999999999999999999988763 3567
Q ss_pred CcEEEcCCEEEcCChhhHHHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 026831 186 NRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLLSC 231 (232)
Q Consensus 186 ~~~v~Dg~~iTa~g~~a~~d~~l~lI~~~~G~~~a~~va~~l~~~~ 231 (232)
+.+|+|||+|||+|+++++||+++||++++|++.|++|++.|+++.
T Consensus 147 ~~~v~dg~iiTs~G~~a~~dlal~li~~~~G~~~A~~va~~l~~~~ 192 (202)
T 3gra_A 147 ASFTLDRDRLSAASPNGAMELMLGLVRRLYGDGLAEGVEEILSFSG 192 (202)
T ss_dssp SSEEEETTEEEESSHHHHHHHHHHHHHHHHCHHHHHHHHHHHC---
T ss_pred CeEEEeCCEEECCCHHHHHHHHHHHHHHHhCHHHHHHHHHHhCcCc
Confidence 7999999999999999999999999999999999999999999863
No 9
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=100.00 E-value=8.1e-36 Score=248.73 Aligned_cols=179 Identities=27% Similarity=0.350 Sum_probs=158.5
Q ss_pred ccEEEEEecCCccccccc-chhhhccCCCceEEEEeccc-cccCCccccccccceEEeeccCCccchhHHHhh--hccce
Q 026831 39 LEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQR-RIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAA--RRLEN 114 (232)
Q Consensus 39 ~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~-~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~--~~d~l 114 (232)
+++|+||++|||++.|+. |.+++ ...+..+.+++.++ . |+.++ .|+.+. ++..+++++ +.|.|
T Consensus 9 ~~~v~ill~~g~~~~e~~~~~~~l-~~ag~~v~~vs~~g~~---~v~~~---~G~~v~------~d~~l~~~~~~~~D~l 75 (208)
T 3ot1_A 9 SKRILVPVAHGSEEMETVIIVDTL-VRAGFQVTMAAVGDKL---QVQGS---RGVWLT------AEQTLEACSAEAFDAL 75 (208)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEESSSCS---EEECT---TSCEEE------CSEEGGGCCGGGCSEE
T ss_pred CCeEEEEECCCCcHHHHHHHHHHH-HHCCCEEEEEEcCCCc---ceecC---CCcEEe------CCCCHHHCCCcCCCEE
Confidence 479999999999999999 88888 55678899999875 4 66665 499999 998898873 56789
Q ss_pred eccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccCccCCCcEEE--cC
Q 026831 115 ARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEIENRVVV--DG 192 (232)
Q Consensus 115 ivpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~~~~d~~~v~--Dg 192 (232)
|||||.++...+..++++++||+++++++++|++||+|++++|+++|||+||++|+||...+.|.+..+.++.+++ ||
T Consensus 76 ivpGG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~vv~d~dg 155 (208)
T 3ot1_A 76 ALPGGVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFAKQQKFVGARMTCHPNFFDHIPSERLSRQRVCYYATQ 155 (208)
T ss_dssp EECCCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTTTTTCSTTCCBCCCGGGGGGSCTTTBCCSSEEEEGGG
T ss_pred EECCCchHHHHHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHHHCCccCCCEEEECccHHHHccCCccccCcEEEeCCC
Confidence 9999975466677899999999999999999999999953789999999999999999999999877777777886 55
Q ss_pred CEEEcCChhhHHHHHHHHHHHhcCHHHHHHHHHhhccc
Q 026831 193 NLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLLS 230 (232)
Q Consensus 193 ~~iTa~g~~a~~d~~l~lI~~~~G~~~a~~va~~l~~~ 230 (232)
|+|||+|+.+++|+++++|++++|++.|++|++.|++.
T Consensus 156 ~iiTs~g~~a~~d~al~lv~~l~G~~~a~~va~~l~~~ 193 (208)
T 3ot1_A 156 HLLTSQGPGTALEFALAMIALLAGVELAQHVAAPMVLH 193 (208)
T ss_dssp TEEEECSGGGHHHHHHHHHHHHHCHHHHHHHHGGGTCC
T ss_pred CEEECCCHHHHHHHHHHHHHHhcCHHHHHHHHHhheeC
Confidence 99999999999999999999999999999999999874
No 10
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=100.00 E-value=5.3e-35 Score=243.16 Aligned_cols=182 Identities=29% Similarity=0.391 Sum_probs=159.4
Q ss_pred ccEEEEEecCCccccccc-chhhhccCCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhh--hcccee
Q 026831 39 LEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAA--RRLENA 115 (232)
Q Consensus 39 ~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~--~~d~li 115 (232)
+++|+||++|||++.|+. |.+++ ...+..+.+++.+++...|+.++ .|+.+. ++..+++++ +.|.||
T Consensus 2 ~~kV~ill~~g~~~~e~~~~~~~l-~~ag~~v~~vs~~~~~~~~v~~~---~g~~v~------~~~~l~~~~~~~~D~li 71 (205)
T 2ab0_A 2 SASALVCLAPGSEETEAVTTIDLL-VRGGIKVTTASVASDGNLAITCS---RGVKLL------ADAPLVEVADGEYDVIV 71 (205)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEECSSTTCCEEECT---TSCEEE------CSEEHHHHTTSCCSEEE
T ss_pred CcEEEEEEcCCCcHHHHHHHHHHH-HHCCCEEEEEeCCCCCCceeecC---CCeEEe------cCCCHHHCCcccCCEEE
Confidence 468999999999999999 88888 55678888888876410144444 599999 998998873 467899
Q ss_pred ccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccCccCCCcEEEcCCE-
Q 026831 116 RLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEIENRVVVDGNL- 194 (232)
Q Consensus 116 vpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~~~~d~~~v~Dg~~- 194 (232)
||||.++...+..++.+.+|||++++++++|++||+|++++|+++|||+||++|+||...+.+.+..+.++.+|+|||+
T Consensus 72 vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa~aGlL~G~~~T~~~~~~~~~~~~~~~~~~vv~Dg~i~ 151 (205)
T 2ab0_A 72 LPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVK 151 (205)
T ss_dssp ECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTTTTTSSSSSCBCCCGGGGGGSCTTTBCCCSEEEETTTT
T ss_pred ECCCcccHHHhccCHHHHHHHHHHHHcCCEEEEECHhHHHHHHHCCccCCCeEEeCccHHHHccCCEEecCCEEEeCCcC
Confidence 9999754666678999999999999999999999999537899999999999999999999998888888899999999
Q ss_pred -EEcCChhhHHHHHHHHHHHhcCHHHHHHHHHhhccc
Q 026831 195 -ITSRGPGTSMEFALAIVEKFFGRNKALELAKILLLS 230 (232)
Q Consensus 195 -iTa~g~~a~~d~~l~lI~~~~G~~~a~~va~~l~~~ 230 (232)
|||+|+.+++|+++++|++++|++.|++|++.|+++
T Consensus 152 viTs~g~~s~~d~al~li~~l~g~~~a~~va~~l~~~ 188 (205)
T 2ab0_A 152 LLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVMA 188 (205)
T ss_dssp EEEECSGGGHHHHHHHHHHHHTCHHHHHHHHTTTTCC
T ss_pred eEECcChhhHHHHHHHHHHHhcChHHHHHHHHhcccC
Confidence 999999999999999999999999999999999986
No 11
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=100.00 E-value=4.4e-35 Score=249.15 Aligned_cols=176 Identities=19% Similarity=0.229 Sum_probs=153.5
Q ss_pred ccEEEEEecCCccccccc-chhhhccCCC--ceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhhhcccee
Q 026831 39 LEVILTTVAPGYFRNHLM-PKLLAVPNIE--KFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAARRLENA 115 (232)
Q Consensus 39 ~~~I~iLl~~gf~~~el~-p~~~a~~~~~--~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~~~d~li 115 (232)
+++|+||++|||+++|+. |.+++.. .+ ..+.+++ +++ ++.++ .|+.+. ++..+++.++.|.||
T Consensus 20 ~~kV~ill~dGf~~~e~~~p~dvl~~-~~~~~~v~~vs-~~~---~V~ss---~G~~v~------~d~~l~~~~~~D~li 85 (236)
T 3bhn_A 20 MYKVGIVLFDDFTDVDFFLMNDLLGR-TSDSWTVRILG-TKP---EHHSQ---LGMTVK------TDGHVSEVKEQDVVL 85 (236)
T ss_dssp CEEEEEECCTTBCHHHHHHHHHHHTT-CSSSEEEEEEE-SSS---EEEBT---TCCEEE------CSEEGGGGGGCSEEE
T ss_pred CCEEEEEeCCCChHHHHHHHHHHHHc-CCCCEEEEEEE-CCC---cEEec---CCcEEe------cCcccccccCCCEEE
Confidence 468999999999999999 9888844 33 5788888 766 67665 499999 888888866788899
Q ss_pred ccCChhhHHhhhcCHHHHHHHHHHHhCCC-cEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccC--ccCCCcEEEcC
Q 026831 116 RLGGLGGAQAFAKSEKLVNMLKKQKESNR-PYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQ--SEIENRVVVDG 192 (232)
Q Consensus 116 vpGg~~~~~~~~~~~~l~~~Lr~~~~~g~-~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~--~~~d~~~v~Dg 192 (232)
||||..+...+..++++++|| ++++++ +|++||+|+ ++|+++|||+||++|+||...+.|++. .+.+..+|+||
T Consensus 86 VPGG~~g~~~l~~~~~l~~~L--~~~~~~~~IaaIC~G~-~lLa~AGLL~Gr~aTth~~~~~~l~~~~p~~~~~~vV~Dg 162 (236)
T 3bhn_A 86 ITSGYRGIPAALQDENFMSAL--KLDPSRQLIGSICAGS-FVLHELGLLKGKKLTTNPDAKAVLQGMGGDVQDLPLVIEG 162 (236)
T ss_dssp ECCCTTHHHHHHTCHHHHHHC--CCCTTTCEEEEETTHH-HHHHHTTTTTTCEECCCGGGHHHHHHTTCEECSSSEEEET
T ss_pred EcCCccCHhhhccCHHHHHHH--HhCCCCCEEEEEcHHH-HHHHHcCCCCCCEEECCHHHHHHHHHhCCccCCCcEEEeC
Confidence 999932455577899999999 555666 999999996 789999999999999999999999875 46899999999
Q ss_pred CEEEcCChhhHHHHHHHHHHHhcCHHHHHHHHHhhcccc
Q 026831 193 NLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLLSC 231 (232)
Q Consensus 193 ~~iTa~g~~a~~d~~l~lI~~~~G~~~a~~va~~l~~~~ 231 (232)
|+|||+|+.+++||++++|++++|++.|++|++.|+++.
T Consensus 163 ~iiTs~G~~a~~dlal~lIe~l~G~~~A~~va~~l~~~~ 201 (236)
T 3bhn_A 163 NIATAGGCLSLLYLVGWLAERLFDSVKRKQIQNQLIPAG 201 (236)
T ss_dssp TEEEECSGGGHHHHHHHHHHHHSCHHHHHHHHTTTSCTT
T ss_pred CEEECCCHHHHHHHHHHHHHHhcCHHHHHHHHHhcccCC
Confidence 999999999999999999999999999999999999873
No 12
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=100.00 E-value=3.2e-34 Score=239.82 Aligned_cols=175 Identities=14% Similarity=0.046 Sum_probs=151.7
Q ss_pred ccEEEEEecCCccccccc-chhhhc--c-----CCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhh-
Q 026831 39 LEVILTTVAPGYFRNHLM-PKLLAV--P-----NIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAA- 109 (232)
Q Consensus 39 ~~~I~iLl~~gf~~~el~-p~~~a~--~-----~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~- 109 (232)
+++|+||++|||+++|+. |.+++. + ..+..+.+++.+++ ++.++ .|+++. ++..+++++
T Consensus 5 m~~v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~~~~~v~~vs~~~~---~v~~~---~G~~i~------~d~~~~~~~~ 72 (212)
T 3efe_A 5 TKKAFLYVFNTMSDWEYGYLIAELNSGRYFKKDLAPLKVITVGANKE---MITTM---GGLRIK------PDISLDECTL 72 (212)
T ss_dssp CCCEEEEECTTCCTTTTHHHHHHHHHCTTSCTTCCCCCEEEEESSSC---CEECT---TCCEEC------CSEEGGGCCC
T ss_pred ccEEEEEECCCccHHHHHHHHHHHHhhhccccCCCCeEEEEEECCCC---eEEcC---CCCEEe------cCcCHHHCCc
Confidence 679999999999999999 777763 1 34567889999887 77765 499999 999999886
Q ss_pred -hccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCc-cchhhhccC-----c
Q 026831 110 -RRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFP-AMCNKLSDQ-----S 182 (232)
Q Consensus 110 -~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~-~~~~~~~~~-----~ 182 (232)
+.|.||||||.+ . ....++++++|||++++++++|++||+|+ ++||++|||+||++|+|| ...+.|++. .
T Consensus 73 ~~~D~livpGG~~-~-~~~~~~~l~~~l~~~~~~gk~iaaiC~G~-~~La~aGlL~Gr~~Tt~~~~~~~~l~~~~p~~~~ 149 (212)
T 3efe_A 73 ESKDLLILPGGTT-W-SEEIHQPILERIGQALKIGTIVAAICGAT-DALANMGYLDTRKHTSNNLEYTKMVCPNYKGEKF 149 (212)
T ss_dssp CTTCEEEECCCSC-T-TSGGGHHHHHHHHHHHHHTCEEEEETHHH-HHHHHTTTTSSSCBCCSCHHHHHHHCTTCCCTTT
T ss_pred cCCCEEEECCCCc-c-ccccCHHHHHHHHHHHHCCCEEEEEcHHH-HHHHHcCCCCCCeeecCCHHHHHHHHhhCCCccc
Confidence 678899999963 3 35789999999999999999999999996 789999999999999997 666777653 3
Q ss_pred cCCCcEEEcCCEEEcCChhhHHHHHHHHHHHhcCHHHHHHHHHhhccc
Q 026831 183 EIENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLLS 230 (232)
Q Consensus 183 ~~d~~~v~Dg~~iTa~g~~a~~d~~l~lI~~~~G~~~a~~va~~l~~~ 230 (232)
+.++.+|+|||+|||+|+. ++||++++|+++.|. .|.+|++++++.
T Consensus 150 ~~~~~~V~Dg~iiTs~G~~-~~d~al~li~~l~g~-~a~~va~~~~~~ 195 (212)
T 3efe_A 150 YELGPAVSDANLVTASGIA-PLEFAMEVLKKIDVF-TLDALHSWYNLN 195 (212)
T ss_dssp BCCCSEEEETTEEEECTTC-HHHHHHHHHHHHTCS-CHHHHHHHHHHH
T ss_pred cCCCcEEEECCEEECCCch-HHHHHHHHHHHhcCC-CHHHHHHHHHHH
Confidence 5789999999999999985 999999999999997 999999999864
No 13
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=100.00 E-value=1.8e-33 Score=226.23 Aligned_cols=162 Identities=23% Similarity=0.291 Sum_probs=143.6
Q ss_pred ccEEEEEecCCccccccc-chhhhccCCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhh--hcccee
Q 026831 39 LEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAA--RRLENA 115 (232)
Q Consensus 39 ~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~--~~d~li 115 (232)
.++|+||++|||++.|+. |.+++ ...+..+.+++.+++ ++.++ .|+.+. ++..+++++ +.|.|+
T Consensus 2 ~~ki~il~~~g~~~~e~~~~~~~l-~~ag~~v~~vs~~~~---~v~~~---~g~~i~------~~~~~~~~~~~~~D~li 68 (168)
T 3l18_A 2 SMKVLFLSADGFEDLELIYPLHRI-KEEGHEVYVASFQRG---KITGK---HGYSVN------VDLTFEEVDPDEFDALV 68 (168)
T ss_dssp CCEEEEECCTTBCHHHHHHHHHHH-HHTTCEEEEEESSSE---EEECT---TSCEEE------ECEEGGGCCGGGCSEEE
T ss_pred CcEEEEEeCCCccHHHHHHHHHHH-HHCCCEEEEEECCCC---EEecC---CCcEEe------ccCChhHCCHhhCCEEE
Confidence 469999999999999999 88888 556788999999887 66665 499999 898898874 467899
Q ss_pred ccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccC--ccCCCcEEEcCC
Q 026831 116 RLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQ--SEIENRVVVDGN 193 (232)
Q Consensus 116 vpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~--~~~d~~~v~Dg~ 193 (232)
||||. +...+..++++.+|||++++++++|++||+|+ ++|+++|||+||++|+||...+.|++. .+.++.+|.|||
T Consensus 69 vpGG~-~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~-~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~~~v~dg~ 146 (168)
T 3l18_A 69 LPGGK-APEIVRLNEKAVMITRRMFEDDKPVASICHGP-QILISAKVLKGRRGTSTITIRDDVINAGAEWIDAEVVVDGN 146 (168)
T ss_dssp ECCBS-HHHHHTTCHHHHHHHHHHHHTTCCEEEETTTH-HHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSSCEEETT
T ss_pred ECCCc-CHHHhccCHHHHHHHHHHHHCCCEEEEECHhH-HHHHHCCccCCCEEEeCccHHHHHHhCCCEEecCCEEEeCC
Confidence 99997 45556789999999999999999999999996 789999999999999999999999885 467889999999
Q ss_pred EEEcCChhhHHHHHHHHHHHhc
Q 026831 194 LITSRGPGTSMEFALAIVEKFF 215 (232)
Q Consensus 194 ~iTa~g~~a~~d~~l~lI~~~~ 215 (232)
+|||+|+.+++|+++++|+++.
T Consensus 147 iiT~~g~~~~~d~~l~li~~l~ 168 (168)
T 3l18_A 147 WVSSRHPGDLYAWMREFVKLLH 168 (168)
T ss_dssp EEEECSGGGHHHHHHHHGGGCC
T ss_pred EEEcCCHHHHHHHHHHHHHhhC
Confidence 9999999999999999999763
No 14
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=100.00 E-value=1.7e-33 Score=230.70 Aligned_cols=173 Identities=20% Similarity=0.255 Sum_probs=145.7
Q ss_pred CccEEEEEecCCccccccc-chhhhccCCCceEEEEeccccccCCccccc--cccceEEeeccCCccchhHHHh--hhcc
Q 026831 38 RLEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEE--EEEEVRVIRKSEDNMSREFEKA--ARRL 112 (232)
Q Consensus 38 ~~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~--~~~Gl~v~~~~~~~~~~~~~~~--~~~d 112 (232)
++++|+||++|||+..|+. |.+++ ...+..+.+++.+.+ ++.+.. .+.|+.+. ++..++++ .+.|
T Consensus 8 ~~~~v~il~~~g~~~~e~~~~~~~l-~~ag~~v~~vs~~~~---~v~~~~~~~~~g~~v~------~~~~~~~~~~~~~D 77 (190)
T 2vrn_A 8 TGKKIAILAADGVEEIELTSPRAAI-EAAGGTTELISLEPG---EIQSMKGDIEPQEKYR------VDHVVSEVQVSDYD 77 (190)
T ss_dssp TTCEEEEECCTTCBHHHHHHHHHHH-HHTTCEEEEEESSSS---EEEEEETTTEEEEEEE------CSEEGGGCCGGGCS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHH-HHCCCEEEEEecCCC---ccccccccccCCcEEe------CCCChhhCChhhCC
Confidence 3479999999999999999 88888 455788889998876 554410 03489998 88888876 3567
Q ss_pred ceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccC--ccCCCcEEE
Q 026831 113 ENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQ--SEIENRVVV 190 (232)
Q Consensus 113 ~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~--~~~d~~~v~ 190 (232)
.||||||..+...+..++++++||+++++++++|++||+|+ ++|+++|||+||++|+||...+.|++. .+.+..+++
T Consensus 78 ~livpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~-~~La~aGlL~gr~~Tt~~~~~~~l~~~~~~~~~~~~v~ 156 (190)
T 2vrn_A 78 GLLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGP-WSLSETGIAQGLKMTSWSSLKRELTLAGAQWVDEECVT 156 (190)
T ss_dssp EEEECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTT-HHHHHTTTTTTCEECCCGGGHHHHHHTTCEECCCSCEE
T ss_pred EEEECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhH-HHHHhCcccCCcEEecCccHHHHHHHcCCeEECCCEEE
Confidence 89999996445556789999999999999999999999996 789999999999999999999999875 455666788
Q ss_pred cCCEEEcCChhhHHHHHHHHHHHh-cCHHHHH
Q 026831 191 DGNLITSRGPGTSMEFALAIVEKF-FGRNKAL 221 (232)
Q Consensus 191 Dg~~iTa~g~~a~~d~~l~lI~~~-~G~~~a~ 221 (232)
|||+|||+|+.+++|+++++|+++ +|++.|+
T Consensus 157 Dg~iiTs~g~~s~~~~~l~li~~l~~g~~~a~ 188 (190)
T 2vrn_A 157 DKGVVTSRKPDDLPAFNKKIVEEFAEGDHSSR 188 (190)
T ss_dssp ETTEEECSSGGGHHHHHHHHHHHHHHCCCGGG
T ss_pred cCCEEEcCChhhHHHHHHHHHHHHhccccccc
Confidence 999999999999999999999999 8887664
No 15
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=100.00 E-value=5e-33 Score=227.94 Aligned_cols=173 Identities=16% Similarity=0.164 Sum_probs=147.6
Q ss_pred ccEEEEEecCCccccccc-chhhhccC-CCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhh--hccce
Q 026831 39 LEVILTTVAPGYFRNHLM-PKLLAVPN-IEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAA--RRLEN 114 (232)
Q Consensus 39 ~~~I~iLl~~gf~~~el~-p~~~a~~~-~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~--~~d~l 114 (232)
|++|+||++|||++.|+. |...+ .. .+..+.+++.+++ ++.++ .|+.+. ++..+++++ +.|.|
T Consensus 1 m~~i~ill~~g~~~~e~~~~~~~l-~~a~~~~v~~vs~~~~---~v~~~---~g~~v~------~~~~~~~~~~~~~D~l 67 (188)
T 2fex_A 1 MTRIAIALAQDFADWEPALLAAAA-RSYLGVEIVHATPDGM---PVTSM---GGLKVT------PDTSYDALDPVDIDAL 67 (188)
T ss_dssp CCEEEEECCTTBCTTSSHHHHHHH-HHHSCCEEEEEETTSS---CEECT---TCCEEE------CSEEGGGCCTTTCSEE
T ss_pred CcEEEEEeCCCchHHHHHHHHHHH-hhcCCceEEEEeCCCC---ceeeC---CCcEEe------ccccHHHCCcccCCEE
Confidence 368999999999999999 88877 34 5778899999877 77765 499999 888888875 56789
Q ss_pred eccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccC-----ccCCCc-E
Q 026831 115 ARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQ-----SEIENR-V 188 (232)
Q Consensus 115 ivpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~-----~~~d~~-~ 188 (232)
|||||.+ .. ...++.+++|||++++++++|++||+|+ ++|+++|||+||++|+||...+.+++. .+.++. +
T Consensus 68 ivpGG~~-~~-~~~~~~l~~~l~~~~~~~k~i~aiC~G~-~~La~aGlL~gr~~T~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (188)
T 2fex_A 68 VIPGGLS-WE-KGTAADLGGLVKRFRDRDRLVAGICAAA-SALGGTGVLNDVAHTGNALASHKAYPAYRGEAHYRDQPRA 144 (188)
T ss_dssp EECCBSH-HH-HTCCCCCHHHHHHHHHTTCEEEEETHHH-HHHHHTTTTTTSCBCCSCHHHHHTSTTCCCGGGBCCCSSC
T ss_pred EECCCCc-cc-ccccHHHHHHHHHHHHCCCEEEEECHHH-HHHHHCCCcCCccccCCcHHHHhhhhhcCCccceecCCCE
Confidence 9999973 33 4678999999999999999999999996 789999999999999999876665543 356778 9
Q ss_pred EEcCCEEEcCChhhHHHHHHHHHHHhcCHHHHHHHHHhhccc
Q 026831 189 VVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLLS 230 (232)
Q Consensus 189 v~Dg~~iTa~g~~a~~d~~l~lI~~~~G~~~a~~va~~l~~~ 230 (232)
|+|||+|||+|++ ++||++++|+++.|.+.+. ++++.|-
T Consensus 145 v~Dg~iiTs~g~~-~~d~al~lv~~l~~~~~~~--~~~~~~~ 183 (188)
T 2fex_A 145 VSDGGVVTAAGSA-PVSFAVEILKSLGLFGPEA--EAELQIF 183 (188)
T ss_dssp EEETTEEEECTTC-HHHHHHHHHHHTTCCSHHH--HHHHGGG
T ss_pred EEECCEEECCCcc-HHHHHHHHHHHccCCCHHH--HHHHHHH
Confidence 9999999999986 8999999999999998887 7777653
No 16
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=99.98 E-value=1.2e-32 Score=224.68 Aligned_cols=166 Identities=14% Similarity=0.178 Sum_probs=145.7
Q ss_pred CCCc-cEEEEEecCCccccccc-chhhhccCCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhh--hc
Q 026831 36 YRRL-EVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAA--RR 111 (232)
Q Consensus 36 ~~~~-~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~--~~ 111 (232)
|.+. ++|.||+.|||++.|+. |.+++ ...|..+.+++.+.+ ++.+. .|+++. ++..+++++ +.
T Consensus 4 m~~t~~~v~il~~~gFe~~E~~~p~~~l-~~ag~~V~~~s~~~~---~v~~~---~G~~v~------~d~~l~~v~~~~y 70 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNFQDEEYFESKKIF-ESAGYKTKVSSTFIG---TAQGK---LGGMTN------IDLLFSEVDAVEF 70 (177)
T ss_dssp -CCCCEEEEECCSEEECHHHHHHHHHHH-HHTTCEEEEEESSSE---EEEET---TSCEEE------ECEEGGGCCGGGC
T ss_pred cccCCCEEEEECCCCccHHHHHHHHHHH-HHCCCEEEEEECCCC---eEeeC---CCCEEe------cCccHHHCCHhHC
Confidence 5444 56777889999999999 99999 667889999998887 77665 499999 999998863 35
Q ss_pred cceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccC--ccCCCcEE
Q 026831 112 LENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQ--SEIENRVV 189 (232)
Q Consensus 112 d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~--~~~d~~~v 189 (232)
|.|+||||. +...+..++++++|||++++++++|++||+|+ ++|+++|||+||++|+||...+.+++. .+.++.+|
T Consensus 71 D~liiPGG~-g~~~l~~~~~~~~~l~~~~~~~k~iaaIC~g~-~~La~aGlL~gr~~T~~~~~~~~l~~~ga~~~~~~vV 148 (177)
T 4hcj_A 71 DAVVFVGGI-GCITLWDDWRTQGLAKLFLDNQKIVAGIGSGV-VIMANAKILEEINVTCLSADESHVRHGNANIMSENVV 148 (177)
T ss_dssp SEEEECCSG-GGGGGTTCHHHHHHHHHHHHTTCEEEEETTHH-HHHHHTTCCTTCEECCCGGGHHHHHHTTCEECSSSEE
T ss_pred CEEEECCCc-cHHHHhhCHHHHHHHHHHHHhCCEEEEecccH-HHHHHCCCCCCCEEEEeCCHHHHHHhCCCEEecCCEE
Confidence 779999997 46678899999999999999999999999996 789999999999999999999999874 57899999
Q ss_pred EcCCEEEcCChhhHHHHHHHHHHHhcC
Q 026831 190 VDGNLITSRGPGTSMEFALAIVEKFFG 216 (232)
Q Consensus 190 ~Dg~~iTa~g~~a~~d~~l~lI~~~~G 216 (232)
+|||+|||+|+.+++||++++|+.+.+
T Consensus 149 ~Dg~liTs~g~~~~~~~a~~lve~L~s 175 (177)
T 4hcj_A 149 VSGNIVTANGPTSSKDFANAVVGVLNS 175 (177)
T ss_dssp EETTEEEECSGGGHHHHHHHHHHHHHT
T ss_pred EECCEEECCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999998854
No 17
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=99.98 E-value=9.1e-33 Score=230.31 Aligned_cols=171 Identities=19% Similarity=0.177 Sum_probs=144.5
Q ss_pred ccEEEEEecCCccccccc-chhhhccCCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhh-hccceec
Q 026831 39 LEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAA-RRLENAR 116 (232)
Q Consensus 39 ~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~-~~d~liv 116 (232)
+++|+||++|||+++|+. |...+....+..+.+++.+++ +.++ .|+++. ++..+++++ +.|.|+|
T Consensus 3 m~kV~ill~~g~~~~E~~~~~~~l~~~~~~~v~~vs~~~~----V~~~---~G~~v~------~d~~l~~~~~~~D~liv 69 (206)
T 3f5d_A 3 LKKALFLILDQYADWEGVYLASALNQREDWSVHTVSLDPI----VSSI---GGFKTS------VDYIIGLEPANFNLLVM 69 (206)
T ss_dssp CEEEEEECCSSBCTTTSHHHHHHHHTSTTEEEEEEESSSE----EEBT---TSCEEE------CSEETTSSCSCCSEEEE
T ss_pred ccEEEEEEcCCCcHHHHHHHHHHHhccCCeEEEEEECCCC----EEec---CCcEEe------cCcChhhCCcCCCEEEE
Confidence 679999999999999999 888884443778888988765 3333 599999 998888875 4678999
Q ss_pred cCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhc-------cCccCCCcEE
Q 026831 117 LGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLS-------DQSEIENRVV 189 (232)
Q Consensus 117 pGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~-------~~~~~d~~~v 189 (232)
|||. +.. . .++++++|||++++++++|++||+|+ ++||++|||+||++|+||.. .++ ...+.++.+|
T Consensus 70 pGG~-~~~-~-~~~~l~~~l~~~~~~gk~iaaiC~G~-~~La~aGLL~Gr~aTthw~~--~~~~~~~~~~~~~~~~~~~V 143 (206)
T 3f5d_A 70 IGGD-SWS-N-DNKKLLHFVKTAFQKNIPIAAICGAV-DFLAKNGLLNNHSHTGNFVY--LWKDYKQYKPISSFVEKQAV 143 (206)
T ss_dssp CCBS-CCC-C-CCHHHHHHHHHHHHTTCCEEEETHHH-HHHHHTTTTTTSCBCCSCGG--GGTTCTTCCCSSCBCCSSEE
T ss_pred cCCC-Chh-h-cCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHcCCCCCCEEEccCHH--HhhhhHhhcCCCeEccCCEE
Confidence 9997 344 3 89999999999999999999999996 78999999999999999942 232 1346788999
Q ss_pred EcCCEEEcCChhhHHHHHHHHHHHhcCHHHHHHHHHhhccc
Q 026831 190 VDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILLLS 230 (232)
Q Consensus 190 ~Dg~~iTa~g~~a~~d~~l~lI~~~~G~~~a~~va~~l~~~ 230 (232)
+|||+|||+|+. ++|+++++|+++ |.+.|++|++.|++.
T Consensus 144 ~Dg~iiTs~G~a-~id~al~li~~l-~~~~a~~va~~~~~~ 182 (206)
T 3f5d_A 144 RDKNLVTANGTA-PIEFTNLILEMI-DFDTPENIEKMMYMN 182 (206)
T ss_dssp EETTEEEECTTC-HHHHHHHHHHHT-TCSCHHHHHHHHHHH
T ss_pred EECCEEECCCch-HHHHHHHHHHHh-CcchHHHHHHHhhhh
Confidence 999999999986 999999999975 568999999999864
No 18
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=99.97 E-value=1.2e-31 Score=220.92 Aligned_cols=165 Identities=18% Similarity=0.221 Sum_probs=143.2
Q ss_pred CCCccEEEEEecCCccccccc-chhhhccCCCceEEEEeccccccCC-ccccccccce-EEeeccCCccchhHHHh--hh
Q 026831 36 YRRLEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQP-EEEEEEEEEV-RVIRKSEDNMSREFEKA--AR 110 (232)
Q Consensus 36 ~~~~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~p-v~s~~~~~Gl-~v~~~~~~~~~~~~~~~--~~ 110 (232)
+.++++|+||++|||+..|+. |...+ ...+..+.+++.+.+ + +.++ .|+ .+. ++..++++ .+
T Consensus 20 ~~~~~kV~ill~~g~~~~e~~~~~~~l-~~ag~~v~~vs~~~~---~~v~~~---~g~~~v~------~~~~l~~~~~~~ 86 (193)
T 1oi4_A 20 AGLSKKIAVLITDEFEDSEFTSPADEF-RKAGHEVITIEKQAG---KTVKGK---KGEASVT------IDKSIDEVTPAE 86 (193)
T ss_dssp TTCCCEEEEECCTTBCTHHHHHHHHHH-HHTTCEEEEEESSTT---CEEECT---TSSCEEE------CCEEGGGCCGGG
T ss_pred hccCCEEEEEECCCCCHHHHHHHHHHH-HHCCCEEEEEECCCC---cceecC---CCCeEEE------CCCChHHCCccc
Confidence 355789999999999999998 88888 455788889998876 5 6654 488 888 88888876 35
Q ss_pred ccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccC--ccCCCcE
Q 026831 111 RLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQ--SEIENRV 188 (232)
Q Consensus 111 ~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~--~~~d~~~ 188 (232)
.|.||||||. +...+..++.+.+||+++++++++|++||+|+ ++|+++|||+||++|+||...+.|++. .+.++.+
T Consensus 87 ~D~livpGG~-~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~-~lLa~aGLL~Gr~~Tth~~~~~~l~~~~~~~~~~~~ 164 (193)
T 1oi4_A 87 FDALLLPGGH-SPDYLRGDNRFVTFTRDFVNSGKPVFAICHGP-QLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEV 164 (193)
T ss_dssp CSEEEECCBT-HHHHHTTSHHHHHHHHHHHHTTCCEEEETTTH-HHHHHHTCCTTCEECCCGGGHHHHHHTTCEECCSSC
T ss_pred CCEEEECCCc-CHHHhhhCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHCCccCCCEEEeChhHHHHHHHcCCEEecCCE
Confidence 6789999996 46666678999999999999999999999995 789999999999999999999999874 5677788
Q ss_pred EEcCC-EEEcCChhhHHHHHHHHHHHhc
Q 026831 189 VVDGN-LITSRGPGTSMEFALAIVEKFF 215 (232)
Q Consensus 189 v~Dg~-~iTa~g~~a~~d~~l~lI~~~~ 215 (232)
|+||| +|||+|+.+++|+++++|+++.
T Consensus 165 v~Dg~~iiTs~g~~~~~d~~l~li~~l~ 192 (193)
T 1oi4_A 165 VVDKDQLVTSRTPDDLPAFNREALRLLG 192 (193)
T ss_dssp EEETTTEEEESSGGGHHHHHHHHHHHHC
T ss_pred EEECCEEEECCCcchHHHHHHHHHHHhh
Confidence 99999 9999999999999999999874
No 19
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.97 E-value=8.7e-33 Score=247.95 Aligned_cols=174 Identities=21% Similarity=0.260 Sum_probs=151.6
Q ss_pred CccEEEEEecCCccccccc-chhhhccCCCceEEEEeccccccCC-ccccccccce-EEeeccCCccchhHHHhh--hcc
Q 026831 38 RLEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQP-EEEEEEEEEV-RVIRKSEDNMSREFEKAA--RRL 112 (232)
Q Consensus 38 ~~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~p-v~s~~~~~Gl-~v~~~~~~~~~~~~~~~~--~~d 112 (232)
++++|+||++|||+++|+. |..++ ...+..+.+++.+++ + +.++ .|+ .+. ++..+++++ +.|
T Consensus 9 ~mkkV~ILl~dgf~~~El~~p~dvL-~~Ag~~v~vvS~~~g---~~V~ss---~G~~~i~------~d~~l~~v~~~~~D 75 (365)
T 3fse_A 9 GKKKVAILIEQAVEDTEFIIPCNGL-KQAGFEVVVLGSRMN---EKYKGK---RGRLSTQ------ADGTTTEAIASEFD 75 (365)
T ss_dssp --CEEEEECCTTBCHHHHHHHHHHH-HHTTCEEEEEESSSS---CCEECT---TSCCEEC------CSEETTTCCGGGCS
T ss_pred CceEEEEEECCCCcHHHHHHHHHHH-HHCCCEEEEEECCCC---ceeecC---CCceEEe------CCCCHhhCCCcCCC
Confidence 4689999999999999999 88888 556788999999887 5 6654 499 999 888888874 467
Q ss_pred ceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhcc--CccCCCcEEE
Q 026831 113 ENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSD--QSEIENRVVV 190 (232)
Q Consensus 113 ~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~--~~~~d~~~v~ 190 (232)
.||||||. +...+..++.+.+||+++++++++|++||+|+ ++||++|||+||++|+||...+.|++ ..+.+..+|+
T Consensus 76 aLiVPGG~-g~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~-~lLA~AGLLdGrraTthw~~~~~L~~~g~~~~d~~vV~ 153 (365)
T 3fse_A 76 AVVIPGGM-APDKMRRNPNTVRFVQEAMEQGKLVAAVCHGP-QVLIEGDLLRGKQATGFIAISKDMMNAGADYLDEALVV 153 (365)
T ss_dssp EEEECCBT-HHHHHTTCHHHHHHHHHHHHTTCEEEEETTTH-HHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCSSCEE
T ss_pred EEEEECCc-chhhccCCHHHHHHHHHHHHCCCEEEEECHHH-HHHHHcCCcCCCEEEeChHHHHHHHhCCCEEecCcEEE
Confidence 89999997 46566789999999999999999999999996 78999999999999999999999986 3567889999
Q ss_pred cCCEEEcCChhhHHHHHHHHHHHhcCHHHHHHHHHh
Q 026831 191 DGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKI 226 (232)
Q Consensus 191 Dg~~iTa~g~~a~~d~~l~lI~~~~G~~~a~~va~~ 226 (232)
|||+|||+|+.+++||++++|+++.|.+.|.++++.
T Consensus 154 DGniITs~G~~a~~d~al~lIe~L~g~~~A~~lA~~ 189 (365)
T 3fse_A 154 DGNLITSREPGDLAIFTTAILSRLGYGGKDAALPDE 189 (365)
T ss_dssp ETTEEEECSGGGHHHHHHHHHHHTTCCCSSSCCCCT
T ss_pred ECCEEECCCHHHHHHHHHHHHHHhcCchHHHHHhhh
Confidence 999999999999999999999999998776665543
No 20
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.97 E-value=6.9e-31 Score=212.61 Aligned_cols=157 Identities=14% Similarity=0.179 Sum_probs=135.1
Q ss_pred ccEEEEEecC---C---cccccccchhhhccCCCceEEEEeccc-cccCCccccccccceEEeeccCCccchhHHHh---
Q 026831 39 LEVILTTVAP---G---YFRNHLMPKLLAVPNIEKFAHLIREQR-RIFQPEEEEEEEEEVRVIRKSEDNMSREFEKA--- 108 (232)
Q Consensus 39 ~~~I~iLl~~---g---f~~~el~p~~~a~~~~~~~~~~v~~~~-~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~--- 108 (232)
.++|+||++| | |+++|+.- ..+..+.+++.+. . ++.++ .|+++. ++..++++
T Consensus 2 ~~~v~ill~~~~~g~~~~~~~e~~~------~~~~~v~~vs~~~~~---~v~~~---~g~~v~------~d~~~~~~~~~ 63 (175)
T 3cne_A 2 AKKVAVLAVNPVNGCGLFQYLEAFF------ENGISYKVFAVSDTK---EIKTN---SGMVLI------VDDVIANLKGH 63 (175)
T ss_dssp CCEEEEEECSSBCHHHHHHHHHHHH------HTTCEEEEEESSSSS---EEEBT---TSCEEE------CSEEGGGGTTC
T ss_pred CcEEEEEEecCcCCCccchhhheee------eCCCEEEEEECCCCC---ceecC---CCeEEE------eccCHHHhccC
Confidence 3689999999 9 88877762 3467788898874 4 66654 599999 88888876
Q ss_pred -hhccceeccCC--hhhHHhhh---cCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhccCc
Q 026831 109 -ARRLENARLGG--LGGAQAFA---KSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQS 182 (232)
Q Consensus 109 -~~~d~livpGg--~~~~~~~~---~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~~~ 182 (232)
++.|.|||||| .++...+. .++++++|||++++++++|++||+|+ ++||++|||+||++|+||...+.|++..
T Consensus 64 ~~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~-~~La~aGlL~G~~~T~~~~~~~~l~~~~ 142 (175)
T 3cne_A 64 EDEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGA-MMFDFTGITKGKKVAVHPLAKPAIQNGI 142 (175)
T ss_dssp GGGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHH-HHHHHTTTTTTCEEECCGGGGGGCCSSE
T ss_pred cccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHH-HHHHHCCCcCCCEEEeCccHHHHhhcCE
Confidence 56788999999 53344444 78999999999999999999999996 7899999999999999999999998877
Q ss_pred cCCCcEEEcCCEEEcCChhhHHHHHHHHHHHh
Q 026831 183 EIENRVVVDGNLITSRGPGTSMEFALAIVEKF 214 (232)
Q Consensus 183 ~~d~~~v~Dg~~iTa~g~~a~~d~~l~lI~~~ 214 (232)
+.++.+|+|||+|||+|+.+++|+++++|+++
T Consensus 143 ~~~~~~v~Dg~iiTs~g~~~~~d~al~li~~l 174 (175)
T 3cne_A 143 ATDEKSEIDGNFFTAQDENTIWTMLPKVIEAL 174 (175)
T ss_dssp EESSSEEEETTEEEESSGGGGGGTHHHHHHHH
T ss_pred EeCCCEEEeCCEEeCCChHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999986
No 21
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=99.96 E-value=6.4e-30 Score=214.57 Aligned_cols=167 Identities=23% Similarity=0.257 Sum_probs=136.2
Q ss_pred cEEEEEec----------CCccccccc-chhhhccCCCceEEEEeccccccCCccccccc-----cc-----eEEeeccC
Q 026831 40 EVILTTVA----------PGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEEEE-----EE-----VRVIRKSE 98 (232)
Q Consensus 40 ~~I~iLl~----------~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~~~-----~G-----l~v~~~~~ 98 (232)
++|+||++ |||++.|++ |..++ ...+..+.+++.+++ ++.+...+ .| +++.
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l-~~ag~~v~~vs~~~~---~v~~~~~~~~~~~~~~~~~~~~i~---- 77 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVF-QEKGYDVKVASIQGG---EVPLDPRSINEKDPSWAEAEAALK---- 77 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHH-HHTTCEEEEEESSCB---CCCBCGGGSSSCCGGGHHHHHHTT----
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHH-HHCCCeEEEECCCCC---ccccCccccccHHHHHhhhhHhhc----
Confidence 79999999 999999999 98888 456788899998876 54432100 13 4555
Q ss_pred CccchhHHHhh--hccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcC------CCCCCeeec
Q 026831 99 DNMSREFEKAA--RRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHG------LLKGKKATA 170 (232)
Q Consensus 99 ~~~~~~~~~~~--~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aG------LL~g~~~T~ 170 (232)
++..+++++ +.|.||||||.+...++..++.+.+|||++++++++|++||+|+ ++|+++| ||+||++|+
T Consensus 78 --~~~~l~~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~-~~La~ag~~~g~~lL~Gr~~T~ 154 (224)
T 1u9c_A 78 --HTARLSKDDAHGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGP-SGLVNATYKDGTPIVKGKTVTS 154 (224)
T ss_dssp --SBEECCGGGGSSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGG-GGGTTCBCTTSCBTTTTCEECC
T ss_pred --CCCChHHcChhhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHH-HHHHHccccCCCceecCcEEec
Confidence 666777764 46779999997544457789999999999999999999999996 7899999 999999999
Q ss_pred Cccchhh---------------hccC--ccCCC-----cEEEcCCEEEcCChhhHHHHHHHHHHHhcCH
Q 026831 171 FPAMCNK---------------LSDQ--SEIEN-----RVVVDGNLITSRGPGTSMEFALAIVEKFFGR 217 (232)
Q Consensus 171 h~~~~~~---------------~~~~--~~~d~-----~~v~Dg~~iTa~g~~a~~d~~l~lI~~~~G~ 217 (232)
||...+. |++. .+.+. .+|+|||+|||+|+.+++|+++++|+++.|+
T Consensus 155 ~~~~~~~~~~~~~~~p~~~~~~l~~~g~~~~~~~~~~~~vv~Dg~liTs~g~~s~~d~al~lv~~l~g~ 223 (224)
T 1u9c_A 155 FTDEEEREVGLDVHMPFLLESTLRLRGANFVRGGKWTDFSVRDGNLITGQNPQSSRSTAEKVVAALEER 223 (224)
T ss_dssp SCHHHHHHHTCGGGSSSCHHHHHHHTTCEECCCSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHTT
T ss_pred CCCHHHhhccccccCCccHHHHHHHcCCEEecCCCCCccEEEeCCEEECCChhhHHHHHHHHHHHHhcc
Confidence 9987664 4432 34444 4999999999999999999999999999885
No 22
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=99.95 E-value=6.5e-28 Score=218.49 Aligned_cols=171 Identities=19% Similarity=0.264 Sum_probs=142.1
Q ss_pred CCCccEEEEEecCCccccccc-chhhhccCCCceEEEEeccccccCCcc-------------ccccccceEEeeccCCcc
Q 026831 36 YRRLEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEE-------------EEEEEEEVRVIRKSEDNM 101 (232)
Q Consensus 36 ~~~~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~-------------s~~~~~Gl~v~~~~~~~~ 101 (232)
|.++++|+||++|||++.|+. |.+.+ ...+..+.+++.+.. |.. ...++.|+.+. +
T Consensus 9 m~~~~kv~ill~dg~e~~E~~~~~~~l-~~ag~~v~~vs~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~i~------~ 78 (396)
T 3uk7_A 9 MANSRTVLILCGDYMEDYEVMVPFQAL-QAFGITVHTVCPGKK---AGDSCPTAVHDFCGHQTYFESRGHNFT------L 78 (396)
T ss_dssp --CCCEEEEECCTTEEHHHHHHHHHHH-HHTTCEEEEECTTCC---TTCEECEEEEECSSSSSCEEEECCCEE------C
T ss_pred hhcCCeEEEEeCCCccHHHHHHHHHHH-HHCCCEEEEEcCCCc---CCCcccccccccccchhhhhccCceee------c
Confidence 344689999999999999999 88888 566888888888754 211 01124588888 8
Q ss_pred chhHHHh--hhccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhc
Q 026831 102 SREFEKA--ARRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLS 179 (232)
Q Consensus 102 ~~~~~~~--~~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~ 179 (232)
+..++++ ++.|.||||||.+ ...+..++.+.+||+++++++++|++||+|+ ++|+++|||+||++|+||...+.|+
T Consensus 79 ~~~~~~~~~~~~D~livpGG~~-~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~-~~La~aGlL~g~~~T~~~~~~~~l~ 156 (396)
T 3uk7_A 79 NATFDEVDLSKYDGLVIPGGRA-PEYLALTASVVELVKEFSRSGKPIASICHGQ-LILAAADTVNGRKCTAYATVGPSLV 156 (396)
T ss_dssp CSCGGGCCGGGCSEEEECCBSH-HHHHTTCHHHHHHHHHHHHTTCCEEEETTTH-HHHHHTTCCTTCEECCCGGGHHHHH
T ss_pred cCChhhcCcccCCEEEECCCcc-hhhcccCHHHHHHHHHHHHcCCEEEEECchH-HHHHhccccCCCEeecCcchHHHHH
Confidence 8888886 4567899999974 5557789999999999999999999999996 7899999999999999999999998
Q ss_pred cC--ccC----CCcEEEcCCEEEcCChhhHHHHHHHHHHHhcCHH
Q 026831 180 DQ--SEI----ENRVVVDGNLITSRGPGTSMEFALAIVEKFFGRN 218 (232)
Q Consensus 180 ~~--~~~----d~~~v~Dg~~iTa~g~~a~~d~~l~lI~~~~G~~ 218 (232)
+. .+. +..+|+|||+|||+|+.+++||++++|+++.|++
T Consensus 157 ~~g~~~~~~~~~~~~v~Dg~iiT~~g~~~~~d~al~li~~l~g~~ 201 (396)
T 3uk7_A 157 AAGAKWVEPITPDVCVVDGSLITAATYEGHPEFIQLFVKALGGKI 201 (396)
T ss_dssp HTTCEECCCSSTTCEEEETTEEEESSGGGHHHHHHHHHHHTTCEE
T ss_pred HCCCEEECCCCCcceEecCCEEEecCcccHHHHHHHHHHHHhccc
Confidence 63 232 3458999999999999999999999999999964
No 23
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=99.95 E-value=8.6e-28 Score=210.00 Aligned_cols=171 Identities=16% Similarity=0.133 Sum_probs=138.2
Q ss_pred ccEEEEEecC--------------Cccccccc-chhhhccCCCceEEEEeccccccCCccccc-----------ccc---
Q 026831 39 LEVILTTVAP--------------GYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEE-----------EEE--- 89 (232)
Q Consensus 39 ~~~I~iLl~~--------------gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~-----------~~~--- 89 (232)
.++|+|++.+ ||++.|++ |.+++ ...+..+.+++.+++ ++..+. ...
T Consensus 48 ~kkIlivlt~~~~~~~~~g~~~~~G~~~~E~~~p~~vL-~~ag~~v~i~S~~g~---~v~~d~~s~~~~~~~~~~~~~~~ 123 (291)
T 1n57_A 48 KHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHL-HAAGFEFEVATISGL---MTKFEYWAMPHKDEKVMPFFEQH 123 (291)
T ss_dssp SCEEEEECCSCCEEECTTSCEEECCBCHHHHHHHHHHH-HHTTCCEEEEESSSC---CCCBCGGGCCTTCTTHHHHHHHH
T ss_pred CCEEEEEeCCcccccccCCccCCCCCcHHHHHHHHHHH-HHCCCEEEEEeCCCC---cccccccccccccHHHHHHHHhc
Confidence 4699999885 79999999 99888 556788899998876 433210 011
Q ss_pred ceEEeeccCCccchhHHHh-------hhccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc--
Q 026831 90 EVRVIRKSEDNMSREFEKA-------ARRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH-- 160 (232)
Q Consensus 90 Gl~v~~~~~~~~~~~~~~~-------~~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a-- 160 (232)
|+.+. ++..++++ .+.|.||||||.+..+.+..++.+.+|||++++++++|++||+|+ ++|+++
T Consensus 124 g~~l~------~~~~l~~v~~~~~~~~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp-~~La~a~~ 196 (291)
T 1n57_A 124 KSLFR------NPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGP-AAFLALRH 196 (291)
T ss_dssp HHHHH------SCEEHHHHHHTCCTTCSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGG-GGGGGGTT
T ss_pred cceec------CCccHHHHhhhccCcccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccH-HHHHhhcc
Confidence 66666 77778773 346779999997534367789999999999999999999999997 567777
Q ss_pred --CCCCCCeeecCccchhhhcc---------------------CccC----CCcEEEcCCEEEcCChhhHHHHHHHHHHH
Q 026831 161 --GLLKGKKATAFPAMCNKLSD---------------------QSEI----ENRVVVDGNLITSRGPGTSMEFALAIVEK 213 (232)
Q Consensus 161 --GLL~g~~~T~h~~~~~~~~~---------------------~~~~----d~~~v~Dg~~iTa~g~~a~~d~~l~lI~~ 213 (232)
|||+||++|+||...+.+++ ..+. +..+|+|||+|||+|+.+++||+++||++
T Consensus 197 ~~GLL~Gr~~Tt~~~~~e~~~~~~~~~~~~~P~~le~~L~~~ga~~~~~~~~~~vV~Dg~lITs~gp~s~~d~al~lve~ 276 (291)
T 1n57_A 197 GDNPLNGYSICAFPDAADKQTPEIGYMPGHLTWYFGEELKKMGMNIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQE 276 (291)
T ss_dssp SCCTTTTCEECCCCGGGGGTTTTTTSSSSCCSSCHHHHHHHTTCEECCSSCSCCEEEETTEEEESSGGGHHHHHHHHHHH
T ss_pred cCccCCCCEEEeCCCHHHhhhccccccccccchhHHHHHHHCCCEEECCCCCCCEEEeCCEEECCCHHHHHHHHHHHHHH
Confidence 59999999999998887642 2344 78999999999999999999999999999
Q ss_pred hcCHHHH
Q 026831 214 FFGRNKA 220 (232)
Q Consensus 214 ~~G~~~a 220 (232)
+.|.+..
T Consensus 277 l~g~~~~ 283 (291)
T 1n57_A 277 MLAAYAG 283 (291)
T ss_dssp HHHHHCC
T ss_pred HhCchhh
Confidence 9987643
No 24
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=99.95 E-value=9.8e-28 Score=217.31 Aligned_cols=169 Identities=20% Similarity=0.250 Sum_probs=141.1
Q ss_pred CCccEEEEEecCCccccccc-chhhhccCCCceEEEEeccccccCCcc-------------ccccccceEEeeccCCccc
Q 026831 37 RRLEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEE-------------EEEEEEEVRVIRKSEDNMS 102 (232)
Q Consensus 37 ~~~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~-------------s~~~~~Gl~v~~~~~~~~~ 102 (232)
..+++|+||++|||++.|+. |.+.+ ...+..+.+++.+++ ++. ...++.|..+. ++
T Consensus 203 ~~~~ki~ill~dg~~~~e~~~~~~~l-~~ag~~v~~vs~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~i~------~~ 272 (396)
T 3uk7_A 203 GANKRILFLCGDYMEDYEVKVPFQSL-QALGCQVDAVCPEKK---AGDRCPTAIHDFEGDQTYSEKPGHTFA------LT 272 (396)
T ss_dssp CCCCEEEEECCTTEEHHHHHHHHHHH-HHHTCEEEEECTTCC---TTCEECEEEEECCSSSSCEEEECCCEE------CC
T ss_pred hccceEEEEecCCCcchhHHHHHHHH-HHCCCEEEEECCCCC---CCcccccccccccccchhhhcCCceee------cc
Confidence 45689999999999999999 88887 455788889988765 210 01123588888 88
Q ss_pred hhHHHhh--hccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCeeecCccchhhhcc
Q 026831 103 REFEKAA--RRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSD 180 (232)
Q Consensus 103 ~~~~~~~--~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~~T~h~~~~~~~~~ 180 (232)
..+++++ +.|.|+||||.+ ...+..++++++|||++++++++|++||+|+ ++||++|||+||++|+||...+.++.
T Consensus 273 ~~~~~~~~~~~D~livpGg~~-~~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~-~~La~aGlL~g~~~T~~~~~~~~~~~ 350 (396)
T 3uk7_A 273 TNFDDLVSSSYDALVIPGGRA-PEYLALNEHVLNIVKEFMNSEKPVASICHGQ-QILAAAGVLKGRKCTAYPAVKLNVVL 350 (396)
T ss_dssp SCGGGCCGGGCSEEEECCBSH-HHHHTTCHHHHHHHHHHHHTTCCEEEEGGGH-HHHHHTTTTTTCEECCCGGGHHHHHH
T ss_pred CCHHHCCcccCCEEEECCCcc-hhhhccCHHHHHHHHHHHHCCCEEEEEchHH-HHHHHcCCcCCCEEecCccHHHHHHH
Confidence 8888863 567899999974 5556789999999999999999999999996 78999999999999999999988875
Q ss_pred C--ccCCC----cEEEcCCEEEcCChhhHHHHHHHHHHHhcCH
Q 026831 181 Q--SEIEN----RVVVDGNLITSRGPGTSMEFALAIVEKFFGR 217 (232)
Q Consensus 181 ~--~~~d~----~~v~Dg~~iTa~g~~a~~d~~l~lI~~~~G~ 217 (232)
. .+.+. ++|+|||+|||+|+.+++||++++|+++.|.
T Consensus 351 ~~~~~~~~~~~~~~v~Dg~iiTs~g~~~~~d~~l~li~~l~~~ 393 (396)
T 3uk7_A 351 GGGTWLEPDPIDRCFTDGNLVTGAAWPGHPEFVSQLMALLGIQ 393 (396)
T ss_dssp TTCEECCCSSTTCEEEETTEEEESSGGGHHHHHHHHHHHHTCE
T ss_pred CCCEEEcCCCceeEEEcCCEEECCCchhHHHHHHHHHHHhccc
Confidence 3 34443 5999999999999999999999999999874
No 25
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=99.94 E-value=2.3e-27 Score=202.05 Aligned_cols=168 Identities=14% Similarity=0.211 Sum_probs=133.6
Q ss_pred ccEEEEEec------------CCccccccc-chhhhccCCCceEEEEeccccccCCcc--cc----------------cc
Q 026831 39 LEVILTTVA------------PGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEE--EE----------------EE 87 (232)
Q Consensus 39 ~~~I~iLl~------------~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~--s~----------------~~ 87 (232)
+++|+|++. +||++.|++ |.+++ ...+..+.+++.+++. ++. +. ..
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl-~~ag~~v~~~s~~g~~--~~d~~s~~~~~~~~~~~~~~~~~~~ 79 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTF-RKEGFEVDFVSETGKF--GWDEHSLAKDFLNGQDETDFKNKDS 79 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHH-HHTTCEEEEECSSSCC--CBCGGGGSTTTSCHHHHHHHHCTTS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHH-HHCCCEEEEECCCCCC--CcCcccccccccChHHHHHHHhhhH
Confidence 468999996 799999999 99988 5568888889887761 121 10 00
Q ss_pred ccceEEeeccCCccchhHHHh--hhccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcC----
Q 026831 88 EEEVRVIRKSEDNMSREFEKA--ARRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHG---- 161 (232)
Q Consensus 88 ~~Gl~v~~~~~~~~~~~~~~~--~~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aG---- 161 (232)
+.|+.+. ++..++++ .+.|.||||||.+..+++..++.+.+|||++++++++|++||+|+ ++|+++|
T Consensus 80 ~~g~~l~------~~~~l~~v~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~-~~La~ag~~~~ 152 (243)
T 1rw7_A 80 DFNKTLA------KIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGP-AIFDGLTDKKT 152 (243)
T ss_dssp HHHHHHH------TCBCGGGCCGGGEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGG-GGGTTCBCTTT
T ss_pred HHHhhhc------cCCChHHCCHhhCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCH-HHHHhcCcccC
Confidence 1255555 66677765 346789999998655667889999999999999999999999997 6899999
Q ss_pred ---CCCCCeeecCccchhh-------------------hcc--CccC------CCcEEEcCCEEEcCChhhHHHHHHHHH
Q 026831 162 ---LLKGKKATAFPAMCNK-------------------LSD--QSEI------ENRVVVDGNLITSRGPGTSMEFALAIV 211 (232)
Q Consensus 162 ---LL~g~~~T~h~~~~~~-------------------~~~--~~~~------d~~~v~Dg~~iTa~g~~a~~d~~l~lI 211 (232)
||+||++|+||...+. +++ ..+. +..+|+|||+|||+|+.+++|++++||
T Consensus 153 g~~lL~G~~~T~~~~~~e~~~~~~~~~p~~~~~~l~~~l~~~g~~~~~~~~~~~~~vV~Dg~liT~~g~~s~~d~al~lv 232 (243)
T 1rw7_A 153 GRPLIEGKSITGFTDVGETILGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSI 232 (243)
T ss_dssp SSBTTTTCEECCSCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHH
T ss_pred CceeeCCcEEeecCCHHHhhccccccccccccccHHHHHHHcCCEEEcCCCCCCCCEEEeCCEEECCChhHHHHHHHHHH
Confidence 9999999999987665 332 2344 789999999999999999999999999
Q ss_pred HHhcC
Q 026831 212 EKFFG 216 (232)
Q Consensus 212 ~~~~G 216 (232)
+++..
T Consensus 233 ~~l~~ 237 (243)
T 1rw7_A 233 DALKN 237 (243)
T ss_dssp HCCC-
T ss_pred HHHhh
Confidence 98754
No 26
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=99.93 E-value=8.3e-26 Score=192.82 Aligned_cols=170 Identities=15% Similarity=0.204 Sum_probs=131.3
Q ss_pred ccEEEEEec------------CCccccccc-chhhhccCCCceEEEEeccccccCCcccc-c-----------------c
Q 026831 39 LEVILTTVA------------PGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEE-E-----------------E 87 (232)
Q Consensus 39 ~~~I~iLl~------------~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~-~-----------------~ 87 (232)
+++|+|++. +||+..|+. |++++ ...|..+.+++.++.. ++... . .
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l-~~aG~~V~iaS~~g~~--~~d~~s~~~~~~~~~~~~~~~~~~~ 79 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTF-EKHGFEVDFVSETGGF--GWDEHYLPKSFIGGEDKMNFETKNS 79 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHH-HTTTCEEEEEESSSCC--CBCTTC-------------------
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHH-HHCCCEEEEEeCCCCC--CcCCccccccccCHHHHHHHHHhhH
Confidence 467887765 589999999 99998 6679999999987662 22110 0 0
Q ss_pred ccceEEeeccCCccchhHHHhh--hccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc-----
Q 026831 88 EEEVRVIRKSEDNMSREFEKAA--RRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH----- 160 (232)
Q Consensus 88 ~~Gl~v~~~~~~~~~~~~~~~~--~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a----- 160 (232)
+.+.++. ++..++++. +.|.||||||.+..+++..++.+.+||+++++++++|++||+|+ ++|+++
T Consensus 80 ~~~~~l~------~~~~l~~v~~~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~-~~La~a~~~~~ 152 (244)
T 3kkl_A 80 AFNKALA------RIKTANEVNASDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGP-LLFDGLIDIKT 152 (244)
T ss_dssp -CHHHHH------TCEEGGGCCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGG-GGGTTCBCTTT
T ss_pred HHHHHhc------CCCChHHCCHhhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHhhcccc
Confidence 0122333 555666653 45779999998655678899999999999999999999999997 679998
Q ss_pred --CCCCCCeeecCccchhh-------------------hcc--CccCC------CcEEEcCCEEEcCChhhHHHHHHHHH
Q 026831 161 --GLLKGKKATAFPAMCNK-------------------LSD--QSEIE------NRVVVDGNLITSRGPGTSMEFALAIV 211 (232)
Q Consensus 161 --GLL~g~~~T~h~~~~~~-------------------~~~--~~~~d------~~~v~Dg~~iTa~g~~a~~d~~l~lI 211 (232)
|||+||++|+||..++. +++ ..+.+ ..+|+|||+||++|+.+++++++++|
T Consensus 153 g~gll~G~~~T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~gp~sa~~~a~~lv 232 (244)
T 3kkl_A 153 TRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTVERVANKNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAI 232 (244)
T ss_dssp SSBTTTTCEECCSCHHHHHHHTTHHHHHHTTCCCHHHHHHTTTCEECCCSSTTSCCEEEETTEEEESSGGGHHHHHHHHH
T ss_pred CCceeCCceecCCCcHHHHhhhhhhhccccccccHHHHHHHCCCEEecCCCCCCCCEEEeCCEEECCChHHHHHHHHHHH
Confidence 99999999999987543 222 23333 68999999999999999999999999
Q ss_pred HHhcCHH
Q 026831 212 EKFFGRN 218 (232)
Q Consensus 212 ~~~~G~~ 218 (232)
+++.+-+
T Consensus 233 ~~l~~~~ 239 (244)
T 3kkl_A 233 NALYSVE 239 (244)
T ss_dssp HHHTC--
T ss_pred HHHhhhh
Confidence 9998754
No 27
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=99.93 E-value=3e-26 Score=193.74 Aligned_cols=172 Identities=17% Similarity=0.220 Sum_probs=130.5
Q ss_pred ccEEEEEec-----CCccccccc-chhhhccCCCceEEEEecccccc---CC-----ccccccccceEEeeccCCccc--
Q 026831 39 LEVILTTVA-----PGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIF---QP-----EEEEEEEEEVRVIRKSEDNMS-- 102 (232)
Q Consensus 39 ~~~I~iLl~-----~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~---~p-----v~s~~~~~Gl~v~~~~~~~~~-- 102 (232)
+++|+||++ |||++.|++ |.+++ ...+..+.+++.+++.. .+ +.+ +.|+.+. ++
T Consensus 6 m~kv~ill~~~~~~~g~~~~E~~~p~~~l-~~ag~~v~~~s~~g~~~~v~d~~s~~~~~~---~~g~~i~------~~~~ 75 (232)
T 1vhq_A 6 MKKIGVILSGCGVYDGSEIHEAVLTLLAI-SRSGAQAVCFAPDKQQVDVINHLTGEAMTE---TRNVLIE------AARI 75 (232)
T ss_dssp CCEEEEECCSBSTTTSBCHHHHHHHHHHH-HHTTCEEEEEECSSBCSCCBCTTTCCBCSC---CCBHHHH------HTTT
T ss_pred CCeEEEEEccCCCCCCeeHHHHHHHHHHH-HHCCCEEEEEecCCCCCcccccccccchhh---hhhhhHH------HHHh
Confidence 468999999 999999999 98888 55678888898876510 11 122 3477665 44
Q ss_pred -----hhHHHh--hhccceeccCChhhHHhh----------hcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCC-
Q 026831 103 -----REFEKA--ARRLENARLGGLGGAQAF----------AKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK- 164 (232)
Q Consensus 103 -----~~~~~~--~~~d~livpGg~~~~~~~----------~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~- 164 (232)
..++++ .+.|.||||||.+....+ ..++.+.+|||+++++|++|++||+|+ ++|+++ |+
T Consensus 76 ~~~~~~~l~~~~~~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~-~~La~a--L~~ 152 (232)
T 1vhq_A 76 TRGEIRPLAQADAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAP-AMLPKI--FDF 152 (232)
T ss_dssp TTTCCEEGGGCCGGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGG-GGHHHH--CSS
T ss_pred hhcCCCCHHHcCcccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHH--hcC
Confidence 566664 356789999997532211 248999999999999999999999996 679999 79
Q ss_pred CCeeecC-c-cchhhhccC--ccCC----CcEEE-cCCEEEcCChhhHHHHHHHHHHHhcCHHH-HHHHHHhh
Q 026831 165 GKKATAF-P-AMCNKLSDQ--SEIE----NRVVV-DGNLITSRGPGTSMEFALAIVEKFFGRNK-ALELAKIL 227 (232)
Q Consensus 165 g~~~T~h-~-~~~~~~~~~--~~~d----~~~v~-Dg~~iTa~g~~a~~d~~l~lI~~~~G~~~-a~~va~~l 227 (232)
||++|+| | ...+.|++. .+.+ ..+++ |||+|||+ ++|++++||++++|++. ++++.+++
T Consensus 153 Gr~~Tth~~~~~~~~l~~~g~~~~~~~~~~~~vd~dg~liTs~----~~d~al~lv~~~~G~~~~~~~~~~~~ 221 (232)
T 1vhq_A 153 PLRLTIGTDIDTAEVLEEMGAEHVPCPVDDIVVDEDNKIVTTP----AYMLAQNIAEAASGIDKLVSRVLVLA 221 (232)
T ss_dssp CCEECCCSCHHHHHHHHHTTCEECCCCTTCCEEETTTTEEEEC----GGGTCSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEeccCCHHHHHHHHHcCCEEecCCCCceEEecCCCEEECC----CHHHHHHHHHHHcCHHHHHHHHHHhh
Confidence 9999999 6 667788763 3433 34554 59999997 88999999999999964 45555543
No 28
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=99.92 E-value=4.5e-25 Score=188.55 Aligned_cols=168 Identities=17% Similarity=0.187 Sum_probs=129.8
Q ss_pred ccEEEEEecC------------Cccccccc-chhhhccCCCceEEEEeccccccCCcccc-cc-----------------
Q 026831 39 LEVILTTVAP------------GYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEE-EE----------------- 87 (232)
Q Consensus 39 ~~~I~iLl~~------------gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~-~~----------------- 87 (232)
+++|+|++.. ||++.|+. |++++ ...|..+.+++.+++. ++... ..
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l-~~aG~~V~~aSp~g~~--~~d~~s~~~~~~~~~~~~~~~~~~~ 85 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNEL-TAAGFEVDVASETGTF--GWDEHSLTQEYLSKEDEKVLHSEHN 85 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHH-HHTTCEEEEEESSSCC--CBCSGGGSGGGCCHHHHHHHTCSSC
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHH-HHCCCEEEEEeCCCCc--ccCcccccccccCHHHHHHHHhhhH
Confidence 5799999876 89999999 99998 6778999999987652 22111 00
Q ss_pred ccceEEeeccCCcc-chhHHHhh--hccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc----
Q 026831 88 EEEVRVIRKSEDNM-SREFEKAA--RRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH---- 160 (232)
Q Consensus 88 ~~Gl~v~~~~~~~~-~~~~~~~~--~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a---- 160 (232)
..+.++. . +..++++. +.|.||||||.+..+++..++.+.+||+++++++++|++||+|+ ++|+++
T Consensus 86 ~~~~~l~------~~~~~l~~v~~~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp-~~La~a~~~~ 158 (247)
T 3n7t_A 86 HFMEKMN------KQVFKAGDLAPHDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGP-AMLPGIHDEN 158 (247)
T ss_dssp HHHHHHH------HCCEEGGGSCGGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGG-GGGGGCBCTT
T ss_pred HHHHHHh------ccCCCHHHCChhhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHH-HHHHHhhccc
Confidence 0011121 2 34555542 45779999998544667899999999999999999999999997 679999
Q ss_pred --CCCCCCeeecCccchhh-------------------hcc--CccCC------CcEEEcCCEEEcCChhhHHHHHHHHH
Q 026831 161 --GLLKGKKATAFPAMCNK-------------------LSD--QSEIE------NRVVVDGNLITSRGPGTSMEFALAIV 211 (232)
Q Consensus 161 --GLL~g~~~T~h~~~~~~-------------------~~~--~~~~d------~~~v~Dg~~iTa~g~~a~~d~~l~lI 211 (232)
|||+||++|+||..++. +++ ..+.+ ..+|+|||+||+.|+.+++++++++|
T Consensus 159 g~gll~G~~~T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~~p~sa~~~a~~lv 238 (247)
T 3n7t_A 159 GDSVIKDKTVTGFTTKGEIMIKVIDKMREDHLHTIADMAQTANAEYVPPEDPWDDFCKVDGRIVTGANPQSATNTARDTI 238 (247)
T ss_dssp SSBTTTTCEECCCCHHHHHHTTCHHHHHHTTCCCHHHHHHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHH
T ss_pred CCccccCceecCCCcHHHhhhhhhhhccccchhhHHHHHHHCCCEEecCCcCCCceEEEcCCEEECCChHHHHHHHHHHH
Confidence 99999999999997654 222 23333 58999999999999999999999999
Q ss_pred HHhcC
Q 026831 212 EKFFG 216 (232)
Q Consensus 212 ~~~~G 216 (232)
+++.+
T Consensus 239 ~~L~~ 243 (247)
T 3n7t_A 239 KVYEG 243 (247)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 98865
No 29
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=99.89 E-value=1.3e-23 Score=179.01 Aligned_cols=165 Identities=15% Similarity=0.085 Sum_probs=120.5
Q ss_pred ccEEEEEec-----CCccccccc-chhhhccCCCceEEEEeccccccC--------CccccccccceEEeeccCCccc--
Q 026831 39 LEVILTTVA-----PGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQ--------PEEEEEEEEEVRVIRKSEDNMS-- 102 (232)
Q Consensus 39 ~~~I~iLl~-----~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~--------pv~s~~~~~Gl~v~~~~~~~~~-- 102 (232)
+++|+||+. |||++.|++ |.+++ ...+..+.+++.+++... ++.+ +.|+.+. ++
T Consensus 23 ~kkV~ill~~~~~~dG~e~~E~~~p~~vL-~~aG~~V~~~S~~~g~~~~~~~~~g~~v~~---s~g~~v~------~d~~ 92 (242)
T 3l3b_A 23 ALNSAVILAGCGHMDGSEIREAVLVMLEL-DRHNVNFKCFAPNKNQKQVVDHKKKESVGE---VRNILVE------SARI 92 (242)
T ss_dssp -CEEEEECCCSSTTTSCCHHHHHHHHHHH-HHTTCEEEEEECSSBCSCEEETTTTEEESC---CCBHHHH------HHHH
T ss_pred cCEEEEEEecCCCCCCeeHHHHHHHHHHH-HHCCCEEEEEecCCCcccccccccCccccc---cCCeEEe------cchh
Confidence 479999997 999999999 99988 566888899998765110 1211 2355555 44
Q ss_pred -----hhHHHh--hhccceeccCChhhHH---h--------hhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcC-CC
Q 026831 103 -----REFEKA--ARRLENARLGGLGGAQ---A--------FAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHG-LL 163 (232)
Q Consensus 103 -----~~~~~~--~~~d~livpGg~~~~~---~--------~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aG-LL 163 (232)
..++++ .+.|.||||||.+... + ...++.+.+|||++++++++|++||+|+ ++|+++| ||
T Consensus 93 ~~~~~~~l~dv~~~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~-~~La~ag~lL 171 (242)
T 3l3b_A 93 ARGSVYDIEQIRVEEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISP-AVVVALLKDI 171 (242)
T ss_dssp TTTCEEEGGGCCGGGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHH-HHHHHHHTTT
T ss_pred ccccCCChHHCCcccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHH-HHHHHhCccc
Confidence 457765 2467799999975322 1 2468999999999999999999999996 7799999 99
Q ss_pred CCCeeecCccchhhhcc--CccCC---CcEEEc--CCEEEcCChhhHHHHHHHHHHHhcCHH
Q 026831 164 KGKKATAFPAMCNKLSD--QSEIE---NRVVVD--GNLITSRGPGTSMEFALAIVEKFFGRN 218 (232)
Q Consensus 164 ~g~~~T~h~~~~~~~~~--~~~~d---~~~v~D--g~~iTa~g~~a~~d~~l~lI~~~~G~~ 218 (232)
+||++|+||.....+++ ..+.+ ..+|+| ||+||+.+... +..+.+...|.+
T Consensus 172 ~Gr~~T~~~~~~~~l~~~Ga~~~~~~~~~vVvD~~g~liTs~a~~~----~~~~~e~~~g~~ 229 (242)
T 3l3b_A 172 AKVKVTIGEDSNGLIDKMGGVHVDCPTIKSVKDDVNRIFSCSAYMR----NDSLYNVYLGIQ 229 (242)
T ss_dssp CCCEECCCC----CHHHHTCEECCCCTTCCEEETTTTEEEECGGGS----CCCHHHHHHHHH
T ss_pred CCCEEEecCChHHHHHHCCCEEEcCCCCeEEEECCCCEEECcCccc----CCCHHHHHhCHH
Confidence 99999999988776665 34554 578888 99999997653 334555555543
No 30
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=99.72 E-value=6.6e-18 Score=162.29 Aligned_cols=148 Identities=12% Similarity=0.054 Sum_probs=119.5
Q ss_pred ccEEEEEecCCccccccc-chhhhccCCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhh--hcccee
Q 026831 39 LEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAA--RRLENA 115 (232)
Q Consensus 39 ~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~--~~d~li 115 (232)
.++|+||++|||+..|+. |..++ ...+..+.+++.+++ ++.++ .|+.+. ++..+++++ ..|.||
T Consensus 534 ~rkVaILl~dGfe~~El~~p~dvL-~~AG~~V~ivS~~gg---~V~ss---~G~~v~------~d~~l~~v~~~~yDaVi 600 (715)
T 1sy7_A 534 SRRVAIIIADGYDNVAYDAAYAAI-SANQAIPLVIGPRRS---KVTAA---NGSTVQ------PHHHLEGFRSTMVDAIF 600 (715)
T ss_dssp TCEEEEECCTTBCHHHHHHHHHHH-HHTTCEEEEEESCSS---CEEBT---TSCEEC------CSEETTTCCGGGSSEEE
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHH-HhcCCEEEEEECCCC---ceecC---CCceEe------cccccccCCcccCCEEE
Confidence 479999999999999999 88888 555788999998887 66654 499988 888887753 467899
Q ss_pred ccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc-CCCCCCeeecCccchhhhccCccCCCcEEEcCCE
Q 026831 116 RLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH-GLLKGKKATAFPAMCNKLSDQSEIENRVVVDGNL 194 (232)
Q Consensus 116 vpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a-GLL~g~~~T~h~~~~~~~~~~~~~d~~~v~Dg~~ 194 (232)
||||..+...+..++++++||+++++++++|++||+|+ ++|+++ ||.+-+.+. ...+|+||++
T Consensus 601 VPGG~~~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~-~lLA~AlGL~~L~~aG---------------a~~VVvDg~l 664 (715)
T 1sy7_A 601 IPGGAKAAETLSKNGRALHWIREAFGHLKAIGATGEAV-DLVAKAIALPQVTVSS---------------EAEVHESYGV 664 (715)
T ss_dssp ECCCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHH-HHHHHHHCCTTSCCCC---------------SSSCEEETTE
T ss_pred EcCCcccHhhhccCHHHHHHHHHHHhCCCEEEEECHHH-HHHHHccCcHhHHhcC---------------CCcEEEeCCE
Confidence 99996456667789999999999999999999999996 789999 984322211 2678999999
Q ss_pred EEcCChh------------hHHHHHHHHHHHhc
Q 026831 195 ITSRGPG------------TSMEFALAIVEKFF 215 (232)
Q Consensus 195 iTa~g~~------------a~~d~~l~lI~~~~ 215 (232)
||+.|+. +..+++..+++.+.
T Consensus 665 ITs~gp~~~~l~~~~~i~~s~~~fa~~fi~~L~ 697 (715)
T 1sy7_A 665 VTLKKVKPESFTDAVKIAKGAAGFLGEFFYAIA 697 (715)
T ss_dssp EEESSCCTTTTTSCCCCSTTCSSHHHHHHHHHH
T ss_pred EECCCCcccccccccccccCHHHHHHHHHHHHH
Confidence 9999985 45667777777663
No 31
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=99.48 E-value=2.9e-14 Score=136.48 Aligned_cols=110 Identities=9% Similarity=-0.006 Sum_probs=94.9
Q ss_pred CccEEEEEecCCccccccc-chhhhccCCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhhh--ccce
Q 026831 38 RLEVILTTVAPGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAAR--RLEN 114 (232)
Q Consensus 38 ~~~~I~iLl~~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~~--~d~l 114 (232)
+.++|+||+.|||++.|+. |...+ ...|..+.+++.+.+ ++.++ .|+.+. ++..|++++. .|.|
T Consensus 599 ~grKVaILlaDGfEe~El~~pvdaL-r~AG~~V~vVS~~~g---~V~gs---~G~~V~------aD~t~~~v~s~~fDAL 665 (753)
T 3ttv_A 599 KGRVVAILLNDEVRSADLLAILKAL-KAKGVHAKLLYSRMG---EVTAD---DGTVLP------IAATFAGAPSLTVDAV 665 (753)
T ss_dssp TTCEEEEECCTTCCHHHHHHHHHHH-HHHTCEEEEEESSSS---EEECT---TSCEEE------CCEETTTSCGGGCSEE
T ss_pred CCCEEEEEecCCCCHHHHHHHHHHH-HHCCCEEEEEEcCCC---eEEeC---CCCEEe------cccchhhCCCcCCCEE
Confidence 3479999999999999999 77777 556888999999876 66665 499999 9999998753 6779
Q ss_pred eccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCC
Q 026831 115 ARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLL 163 (232)
Q Consensus 115 ivpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL 163 (232)
||||| +...+..++++++||+++++++|+|++||+|+ .+|+++||-
T Consensus 666 VVPGG--g~~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp-~lLa~AGL~ 711 (753)
T 3ttv_A 666 IVPCG--NIADIADNGDANYYLMEAYKHLKPIALAGDAR-KFKATIKIA 711 (753)
T ss_dssp EECCS--CGGGTTTCHHHHHHHHHHHHTTCCEEEEGGGG-GGGGGGTCC
T ss_pred EECCC--ChHHhhhCHHHHHHHHHHHhcCCeEEEECchH-HHHHHcCCC
Confidence 99999 36668899999999999999999999999997 679999983
No 32
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=99.06 E-value=1.5e-10 Score=110.42 Aligned_cols=103 Identities=10% Similarity=0.033 Sum_probs=83.0
Q ss_pred ccEEEEEec--CCccccccc-chhhhccCCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhh--hccc
Q 026831 39 LEVILTTVA--PGYFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAA--RRLE 113 (232)
Q Consensus 39 ~~~I~iLl~--~gf~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~--~~d~ 113 (232)
.++|+||+. +||+..|+. |...+ ...|..+.+|+.+.+ . . +|..|++.+ ..|.
T Consensus 529 g~kVaIL~a~~dGfe~~E~~~~~~~L-~~aG~~V~vVs~~~g---~------------~------vD~t~~~~~s~~fDA 586 (688)
T 2iuf_A 529 GLKVGLLASVNKPASIAQGAKLQVAL-SSVGVDVVVVAERXA---N------------N------VDETYSASDAVQFDA 586 (688)
T ss_dssp TCEEEEECCTTCHHHHHHHHHHHHHH-GGGTCEEEEEESSCC---T------------T------CCEESTTCCGGGCSE
T ss_pred CCEEEEEecCCCCCcHHHHHHHHHHH-HHCCCEEEEEeccCC---c------------c------cccchhcCCccccCe
Confidence 479999999 999999998 77777 667888888887543 1 1 455565542 4567
Q ss_pred eeccCChhh----------------HHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCC
Q 026831 114 NARLGGLGG----------------AQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLK 164 (232)
Q Consensus 114 livpGg~~~----------------~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~ 164 (232)
||||||..+ ...+..+++++.||+++++.||+|++||+|++ +|.++|+..
T Consensus 587 VvlPGG~~g~~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~-vL~~aGi~~ 652 (688)
T 2iuf_A 587 VVVADGAEGLFGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSD-ALESGQISS 652 (688)
T ss_dssp EEECTTCGGGCCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHH-HHHHTTCCT
T ss_pred EEecCCCcccccccccccccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHH-HHHHcCCCC
Confidence 999999655 45577899999999999999999999999985 699999854
No 33
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=98.85 E-value=1.9e-09 Score=102.66 Aligned_cols=103 Identities=10% Similarity=-0.018 Sum_probs=81.6
Q ss_pred CccEEEEEecCC-ccccccc-chhhhccCCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhh--hccc
Q 026831 38 RLEVILTTVAPG-YFRNHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAA--RRLE 113 (232)
Q Consensus 38 ~~~~I~iLl~~g-f~~~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~--~~d~ 113 (232)
..++|+||+.|| |+..|+. |...+ ...|..+.+|+.+.+ .| ++..|++++ ..|.
T Consensus 536 ~grKVaILvadG~fE~~El~~p~~aL-~~aGa~V~vVsp~~g-----------~G----------vD~t~~~~~s~~fDA 593 (688)
T 3ej6_A 536 ATLRVGVLSTTKGGSLDKAKALKEQL-EKDGLKVTVIAEYLA-----------SG----------VDQTYSAADATAFDA 593 (688)
T ss_dssp TTCEEEEECCSSSSHHHHHHHHHHHH-HHTTCEEEEEESSCC-----------TT----------CCEETTTCCGGGCSE
T ss_pred cCCEEEEEccCCCccHHHHHHHHHHH-HHCCCEEEEEeCCCC-----------CC----------cccCcccCChhcCcE
Confidence 358999999999 9999998 77777 677888888887653 03 344455543 3566
Q ss_pred eeccCChhhH-------HhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCC
Q 026831 114 NARLGGLGGA-------QAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLL 163 (232)
Q Consensus 114 livpGg~~~~-------~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL 163 (232)
|+||||..+. ..+..+++++.|++++++++|+|++||+|+ .+|.++|+-
T Consensus 594 VvlPGG~~~~~~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp-~lL~~AGI~ 649 (688)
T 3ej6_A 594 VVVAEGAERVFSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAK-KALQSIGVE 649 (688)
T ss_dssp EEECTTCCTTTSTTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGH-HHHHHTTCC
T ss_pred EEECCCcccccccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccH-HHHHHcCCC
Confidence 9999996432 457789999999999999999999999997 569999984
No 34
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=98.50 E-value=1.9e-08 Score=82.58 Aligned_cols=57 Identities=26% Similarity=0.246 Sum_probs=44.5
Q ss_pred hccceeccCChhhHHh-----hhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcCCCCCCe
Q 026831 110 RRLENARLGGLGGAQA-----FAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKK 167 (232)
Q Consensus 110 ~~d~livpGg~~~~~~-----~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aGLL~g~~ 167 (232)
..|.||||||...... ...++.+.+||+++.+++++|.+||.|. .+|+++|+|+|+-
T Consensus 41 ~~d~lil~Gg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~-qlLa~aGll~g~v 102 (213)
T 3d54_D 41 DYELIILPGGFSYGDYLRPGAVAAREKIAFEIAKAAERGKLIMGICNGF-QILIEMGLLKGAL 102 (213)
T ss_dssp SCSEEEECEECGGGGCSSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHH-HHHHHHTSSCSEE
T ss_pred cCCEEEECCCCchhhhhccccccccHHHHHHHHHHHHCCCEEEEECHHH-HHHHHcCCCCCCe
Confidence 4566999999632221 1235678999999999999999999995 7899999999853
No 35
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=97.14 E-value=0.00067 Score=55.99 Aligned_cols=54 Identities=17% Similarity=0.140 Sum_probs=40.3
Q ss_pred HHhhhccceeccCChhhHH-hhhcC--HHHHHHHHHHHhC-CCcEEEEcchhHHhhhhc
Q 026831 106 EKAARRLENARLGGLGGAQ-AFAKS--EKLVNMLKKQKES-NRPYGAICASPALVLEPH 160 (232)
Q Consensus 106 ~~~~~~d~livpGg~~~~~-~~~~~--~~l~~~Lr~~~~~-g~~v~aic~G~~~lLA~a 160 (232)
++++..|.||+|||..... ....+ ..+.++|+++.+. +++|.+||.|. .+|+++
T Consensus 39 ~~l~~~dglil~GG~~~~~~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~-QlL~~~ 96 (227)
T 2abw_A 39 HDLGLCDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGC-ILLSKN 96 (227)
T ss_dssp HHHHTCSEEEECCSCHHHHHHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHH-HHTEEE
T ss_pred cccccCCEEEECCCcHHHHHHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHH-HHHHHH
Confidence 3455678899999963222 22233 5689999999999 99999999995 678865
No 36
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=97.07 E-value=0.00031 Score=56.64 Aligned_cols=52 Identities=13% Similarity=0.185 Sum_probs=37.8
Q ss_pred hhhccceeccCChhhHHh-hhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 108 AARRLENARLGGLGGAQA-FAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 108 ~~~~d~livpGg~~~~~~-~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
.++.|.|++|||.....+ +..+..+.++|+++.++++++.+||.|. .+|+.+
T Consensus 36 l~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~pilgIC~G~-q~l~~~ 88 (196)
T 2nv0_A 36 LNEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAGL-IILAKE 88 (196)
T ss_dssp GGGCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHH-HHHSBC
T ss_pred HhhCCEEEECCCChhhHHHHhhhHHHHHHHHHHHHCCCcEEEECHHH-HHHHHH
Confidence 345677999999643321 2223455789999999999999999996 668863
No 37
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=96.95 E-value=0.00037 Score=56.88 Aligned_cols=51 Identities=18% Similarity=0.130 Sum_probs=37.0
Q ss_pred hhccceeccCChhhHHh-hhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 109 ARRLENARLGGLGGAQA-FAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 109 ~~~d~livpGg~~~~~~-~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
++.|.|++|||.+.... +..+..+.++|+++.++++++.+||.|. .+|+.+
T Consensus 56 ~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G~-QlL~~~ 107 (208)
T 2iss_D 56 DMVDGLILPGGESTTMIRILKEMDMDEKLVERINNGLPVFATCAGV-ILLAKR 107 (208)
T ss_dssp GGCSEEEECSSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHH-HHHEEE
T ss_pred hhCCEEEECCCcHHHHHhhhhhhhHHHHHHHHHHCCCeEEEECHHH-HHHHHH
Confidence 35677999999642221 1223346789999999999999999995 668864
No 38
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=96.94 E-value=0.00037 Score=57.38 Aligned_cols=51 Identities=18% Similarity=0.183 Sum_probs=37.6
Q ss_pred hhccceeccCChhhHH-hhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 109 ARRLENARLGGLGGAQ-AFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 109 ~~~d~livpGg~~~~~-~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
+..|.|++|||..... .+..+..+.++|+++.+++++|.+||.|. .+|+.+
T Consensus 59 ~~~Dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~-QlL~~~ 110 (219)
T 1q7r_A 59 EGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTCAGL-ILLAKR 110 (219)
T ss_dssp TTCSEEEECCCCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETTHH-HHHEEE
T ss_pred hhCCEEEECCCChHHHHHHhhhhHHHHHHHHHHHcCCeEEEECHHH-HHHHHH
Confidence 3567799999964322 22234456799999999999999999996 668864
No 39
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=96.86 E-value=0.0012 Score=67.45 Aligned_cols=100 Identities=8% Similarity=-0.046 Sum_probs=64.4
Q ss_pred CccEEEEEecCCccc-cccc-chhhhccCCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhhhcccee
Q 026831 38 RLEVILTTVAPGYFR-NHLM-PKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAARRLENA 115 (232)
Q Consensus 38 ~~~~I~iLl~~gf~~-~el~-p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~~~d~li 115 (232)
..++|+|+.|||... .++. .+..+ |.....+....- .+ .. +.+...|.|+
T Consensus 1046 ~~pkVaIi~~~G~N~~~~~~~A~~~a----G~~~~~v~~~dl-----~~----------------~~---~~l~~~d~lv 1097 (1303)
T 3ugj_A 1046 ARPKVAVLREQGVNSHVEMAAAFHRA----GFDAIDVHMSDL-----LG----------------GR---IGLGNFHALV 1097 (1303)
T ss_dssp CCCEEEEEECTTCCCHHHHHHHHHHT----TCEEEEEEHHHH-----HT----------------TS---CCGGGCSEEE
T ss_pred CCCEEEEEecCCcCCHHHHHHHHHHh----CCceEEEeeccc-----cc----------------Cc---ccHhhCCEEE
Confidence 356999999999886 6766 43333 443333221000 00 00 0122456699
Q ss_pred ccCChhhHH----------hhhcCHHHHHHHHHHH-hCCCcEEEEcchhHHhhhhc-CCCCCC
Q 026831 116 RLGGLGGAQ----------AFAKSEKLVNMLKKQK-ESNRPYGAICASPALVLEPH-GLLKGK 166 (232)
Q Consensus 116 vpGg~~~~~----------~~~~~~~l~~~Lr~~~-~~g~~v~aic~G~~~lLA~a-GLL~g~ 166 (232)
+|||...-+ ....++.+.+.|+++. ++++++.+||.|. .+|.++ |||.|.
T Consensus 1098 lPGGfSygD~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~-QlL~e~~gllPg~ 1159 (1303)
T 3ugj_A 1098 ACGGFSYGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGC-QMMSNLRELIPGS 1159 (1303)
T ss_dssp ECCSCGGGGTTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHH-HHHHTTGGGSTTC
T ss_pred ECCCCcchhhhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHH-HHHHHhcCcCCCC
Confidence 999952111 1345678888898865 6899999999995 779998 999986
No 40
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.52 E-value=0.0011 Score=52.92 Aligned_cols=51 Identities=16% Similarity=0.145 Sum_probs=37.1
Q ss_pred hhccceeccCChhh-HHhhhcCHHHHHHHHHHHhCC-CcEEEEcchhHHhhhhc
Q 026831 109 ARRLENARLGGLGG-AQAFAKSEKLVNMLKKQKESN-RPYGAICASPALVLEPH 160 (232)
Q Consensus 109 ~~~d~livpGg~~~-~~~~~~~~~l~~~Lr~~~~~g-~~v~aic~G~~~lLA~a 160 (232)
+..|.|++|||.+. ...+..+..+.++|+++.+++ ++|.+||.|. .+|+.+
T Consensus 38 ~~~dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~~PilGiC~G~-Q~l~~~ 90 (191)
T 2ywd_A 38 EGLKALIVPGGESTTIGKLAREYGIEDEVRKRVEEGSLALFGTCAGA-IWLAKE 90 (191)
T ss_dssp TTCSEEEECSSCHHHHHHHHHHTTHHHHHHHHHHTTCCEEEEETHHH-HHHEEE
T ss_pred ccCCEEEECCCChhhhHHhhhhhhHHHHHHHHHHCCCCeEEEECHHH-HHHHHH
Confidence 34577999999532 222222345788999999899 9999999995 678864
No 41
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=96.32 E-value=0.0019 Score=52.38 Aligned_cols=53 Identities=15% Similarity=0.050 Sum_probs=36.0
Q ss_pred HHhhhccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 106 EKAARRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 106 ~~~~~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
+++...|.||+||+. ...+....-+...+++...+.++|+.+||-|. .+|+++
T Consensus 36 ~~l~~~D~lilPG~g-~~~~~~~~~~~~~~i~~~~~~~~PvlGIClG~-QlL~~~ 88 (211)
T 4gud_A 36 QVVLAADKLFLPGVG-TASEAMKNLTERDLIELVKRVEKPLLGICLGM-QLLGKL 88 (211)
T ss_dssp HHHHHCSEEEECCCS-CHHHHHHHHHHTTCHHHHHHCCSCEEEETHHH-HTTSSE
T ss_pred HHHhCCCEEEECCCC-CHHHHHHHHHhcChHHHHHHcCCCEEEEchhH-hHHHHH
Confidence 445556789999963 23333333344456777888999999999995 678754
No 42
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=95.89 E-value=0.0026 Score=51.30 Aligned_cols=50 Identities=20% Similarity=0.191 Sum_probs=35.6
Q ss_pred hccceeccC-ChhhHH-hhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 110 RRLENARLG-GLGGAQ-AFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 110 ~~d~livpG-g~~~~~-~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
..|.|++|| |..... ....+..+.++|+++.++++++.+||.|. .+|+.+
T Consensus 40 ~~d~lil~G~g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~-Qll~~~ 91 (200)
T 1ka9_H 40 EADLLVLPGQGHFGQVMRAFQESGFVERVRRHLERGLPFLGICVGM-QVLYEG 91 (200)
T ss_dssp SCSEEEECCCSCHHHHHHTTSSSCTHHHHHHHHHTTCCEEECTHHH-HTTSSE
T ss_pred cCCEEEECCCCcHHHHHHHHHhcCHHHHHHHHHHcCCeEEEEcHHH-HHHHHh
Confidence 456688899 432111 11223457899999999999999999995 679987
No 43
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=95.88 E-value=0.0059 Score=50.66 Aligned_cols=50 Identities=14% Similarity=0.182 Sum_probs=36.5
Q ss_pred hccceeccCChhhHHhhhcC------HHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 110 RRLENARLGGLGGAQAFAKS------EKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 110 ~~d~livpGg~~~~~~~~~~------~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
..|.|||+||..++.....+ ....++|+++.+.+++|.+||-|. .+|+.+
T Consensus 45 ~~d~lii~GGp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~-QlL~~~ 100 (236)
T 3l7n_A 45 DFDMLILMGGPQSPSSTKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGA-QLMGVA 100 (236)
T ss_dssp GCSEEEECCCSSCTTCCTTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHH-HHHHHH
T ss_pred ccCEEEECCCCCCcccccccCcccchHHHHHHHHHHHHcCCCEEEEchHH-HHHHHH
Confidence 45679999986432211111 457899999999999999999995 668865
No 44
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=95.78 E-value=0.0088 Score=48.92 Aligned_cols=53 Identities=13% Similarity=0.029 Sum_probs=39.4
Q ss_pred HHhhhccceeccCChhh-HHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhh
Q 026831 106 EKAARRLENARLGGLGG-AQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEP 159 (232)
Q Consensus 106 ~~~~~~d~livpGg~~~-~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~ 159 (232)
+.+...|.|++|||... .-.......+.+.|++..++|+++.++|.|+ .+|++
T Consensus 75 ~~l~~ad~I~l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa-~~l~~ 128 (206)
T 3l4e_A 75 TKLRKNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGA-VITSP 128 (206)
T ss_dssp HHHHHSSEEEECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHH-HTTSS
T ss_pred HHHHhCCEEEECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHH-HHhcc
Confidence 34556788999999631 1123356678899999999999999999995 55763
No 45
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=95.62 E-value=0.0071 Score=50.16 Aligned_cols=53 Identities=11% Similarity=-0.015 Sum_probs=39.0
Q ss_pred HHhhhccceeccCChhh-HHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhh
Q 026831 106 EKAARRLENARLGGLGG-AQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEP 159 (232)
Q Consensus 106 ~~~~~~d~livpGg~~~-~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~ 159 (232)
+.+...|.||+|||... .........+.+.|++..++|+++.++|.|+ .+|++
T Consensus 75 ~~l~~ad~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~-~~l~~ 128 (229)
T 1fy2_A 75 AAIEKAEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWSAGA-NLACP 128 (229)
T ss_dssp HHHHHCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHH-HHTSS
T ss_pred HHHhcCCEEEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHH-Hhhcc
Confidence 55556788999999631 1122344568889999999999999999995 56765
No 46
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=95.42 E-value=0.0093 Score=47.53 Aligned_cols=45 Identities=18% Similarity=0.198 Sum_probs=34.4
Q ss_pred ccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 111 RLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 111 ~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
.|.|++|||. .+. ......++|+++.+.++++.+||.|. .+|+.+
T Consensus 44 ~dglil~Gg~-~~~---~~~~~~~~i~~~~~~~~PilGIC~G~-Q~l~~~ 88 (189)
T 1wl8_A 44 PKGIIFSGGP-SLE---NTGNCEKVLEHYDEFNVPILGICLGH-QLIAKF 88 (189)
T ss_dssp CSEEEECCCS-CTT---CCTTHHHHHHTGGGTCSCEEEETHHH-HHHHHH
T ss_pred CCEEEECCCC-Chh---hhhhHHHHHHHHhhCCCeEEEEcHHH-HHHHHH
Confidence 6779999995 332 24456888987778899999999996 668754
No 47
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=95.23 E-value=0.0088 Score=49.83 Aligned_cols=50 Identities=18% Similarity=0.186 Sum_probs=35.9
Q ss_pred hccceeccCChhhHHhh---hcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 110 RRLENARLGGLGGAQAF---AKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 110 ~~d~livpGg~~~~~~~---~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
..|.||+|||..+.... ..-....++|+++.++++++.+||-|. .+|+.+
T Consensus 57 ~~Dglil~GG~~~~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~-QlL~~a 109 (239)
T 1o1y_A 57 EYSLVVLLGGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGS-QMLAKV 109 (239)
T ss_dssp GCSEEEECCCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHH-HHHHHH
T ss_pred cCCEEEECCCCccccCCccChhHHHHHHHHHHHHHCCCCEEEEchhH-HHHHHH
Confidence 45779999985332211 111367899999988899999999995 678864
No 48
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=95.04 E-value=0.022 Score=48.87 Aligned_cols=47 Identities=9% Similarity=0.049 Sum_probs=36.9
Q ss_pred hhhccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhh
Q 026831 108 AARRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEP 159 (232)
Q Consensus 108 ~~~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~ 159 (232)
+...|.||+|||.+. . ..+...++|+++.+.+++|.+||.|. .+|+.
T Consensus 88 l~~~dgiil~GG~~~-~---~~~~~~~~i~~~~~~~~PilGIC~G~-Q~l~~ 134 (289)
T 2v4u_A 88 LCKADGILVPGGFGI-R---GTLGKLQAISWARTKKIPFLGVXLGM-QLAVI 134 (289)
T ss_dssp HHHCSEEEECSCCSS-T---THHHHHHHHHHHHHTTCCEEEETHHH-HHHHH
T ss_pred HhhCCEEEecCCCCc-h---hHHHHHHHHHHHHHcCCcEEEECccH-HHHHH
Confidence 345677999999642 2 22578899999999999999999995 66875
No 49
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=94.97 E-value=0.014 Score=49.14 Aligned_cols=50 Identities=16% Similarity=0.174 Sum_probs=36.3
Q ss_pred hccceeccCChhhHHh-hhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 110 RRLENARLGGLGGAQA-FAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 110 ~~d~livpGg~~~~~~-~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
+.|.||||||..+..+ ...-....++|+++.+.++++.+||.|. .+|+.+
T Consensus 48 ~~d~lIl~GGp~~~~d~~~~~~~~~~~i~~~~~~~~PvlGIC~G~-Qll~~~ 98 (250)
T 3m3p_A 48 DCSGLAMMGGPMSANDDLPWMPTLLALIRDAVAQRVPVIGHCLGG-QLLAKA 98 (250)
T ss_dssp GSSEEEECCCSSCTTSCCTTHHHHHHHHHHHHHHTCCEEEETHHH-HHHHHH
T ss_pred cCCEEEECCCCCcccccchHHHHHHHHHHHHHHcCCCEEEECHHH-HHHHHH
Confidence 4566999998532221 1122467899999988999999999995 668865
No 50
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=94.86 E-value=0.02 Score=45.41 Aligned_cols=47 Identities=26% Similarity=0.227 Sum_probs=30.9
Q ss_pred hccceeccCChhhHHh-hhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 110 RRLENARLGGLGGAQA-FAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 110 ~~d~livpGg~~~~~~-~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
..|.|++|||...... ......+.++|+ +.++++.+||.|. .+|+.+
T Consensus 37 ~~dglil~GG~~~~~~~~~~~~~~~~~i~---~~~~PilGIC~G~-Qll~~~ 84 (186)
T 2ywj_A 37 GIDALIIPGGESTAIGKLMKKYGLLEKIK---NSNLPILGTCAGM-VLLSKG 84 (186)
T ss_dssp TCSEEEECCSCHHHHHHHHHHTTHHHHHH---TCCCCEEEETHHH-HHHSSC
T ss_pred cCCEEEECCCCchhhhhhhhccCHHHHHH---hcCCcEEEECHHH-HHHHHH
Confidence 4577999999632221 111122455665 7899999999995 678876
No 51
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=94.82 E-value=0.015 Score=46.68 Aligned_cols=48 Identities=10% Similarity=0.054 Sum_probs=31.9
Q ss_pred ccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 111 RLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 111 ~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
.|.|+++||.+........+...++|+++ +.++++.+||-|. .+|+.+
T Consensus 46 ~dglil~gG~~~~~~~~~~~~~~~~i~~~-~~~~PvLGIC~G~-QlL~~~ 93 (195)
T 1qdl_B 46 PDRLIISPGPGTPEKREDIGVSLDVIKYL-GKRTPILGVCLGH-QAIGYA 93 (195)
T ss_dssp CSEEEECCCSSCTTSHHHHTTHHHHHHHH-TTTSCEEEETHHH-HHHHHH
T ss_pred CCEEEECCCCCChhhhhhhhHHHHHHHHh-cCCCcEEEEehHH-HHHHHH
Confidence 56789977743222111112346888875 7899999999995 668865
No 52
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=94.68 E-value=0.017 Score=46.39 Aligned_cols=50 Identities=14% Similarity=0.030 Sum_probs=34.7
Q ss_pred hccceeccCChhhHHhh---hcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcC
Q 026831 110 RRLENARLGGLGGAQAF---AKSEKLVNMLKKQKESNRPYGAICASPALVLEPHG 161 (232)
Q Consensus 110 ~~d~livpGg~~~~~~~---~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aG 161 (232)
..|.|++||+. ..... ..+..+.++|+++.+++++|.+||.|. .+|+.+.
T Consensus 42 ~~dglilpG~g-~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~-Qll~~~~ 94 (201)
T 1gpw_B 42 LYDLLFIPGVG-HFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGM-QLLFEES 94 (201)
T ss_dssp CCSEEEECCCS-CSHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHH-HTTSSEE
T ss_pred CCCEEEECCCC-cHHHHHHHHHhhCHHHHHHHHHHcCCeEEEEChhH-HHHHHhh
Confidence 45668889953 21111 111237789999988999999999995 6788763
No 53
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=94.39 E-value=0.033 Score=46.67 Aligned_cols=51 Identities=14% Similarity=0.148 Sum_probs=37.0
Q ss_pred hhccceeccCChh-hHH-------------hhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 109 ARRLENARLGGLG-GAQ-------------AFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 109 ~~~d~livpGg~~-~~~-------------~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
...|.|+++||.. .+. +..+|...+++||++.++++++.+||-|. .+|+.+
T Consensus 60 ~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~-Qll~~a 124 (254)
T 3fij_A 60 SLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGM-QLVNVA 124 (254)
T ss_dssp HTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHH-HHHHHH
T ss_pred hhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHH-HHHHHH
Confidence 3567899999941 011 11234557899999999999999999995 668865
No 54
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=93.68 E-value=0.032 Score=45.47 Aligned_cols=47 Identities=17% Similarity=0.188 Sum_probs=31.2
Q ss_pred hccceeccCC-hhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 110 RRLENARLGG-LGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 110 ~~d~livpGg-~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
+.|.||+||| .+........+.+.+++ .+.++++.+||-|. .+|+.+
T Consensus 54 ~~DglIl~GG~p~~~~~~~~~~~l~~~~---~~~~~PiLGIC~G~-Qll~~~ 101 (212)
T 2a9v_A 54 GLDGLVLSGGAPNIDEELDKLGSVGKYI---DDHNYPILGICVGA-QFIALH 101 (212)
T ss_dssp TCSEEEEEEECSCGGGTGGGHHHHHHHH---HHCCSCEEEETHHH-HHHHHH
T ss_pred CCCEEEECCCCCCCCcccccchhHHHHH---HhCCCCEEEEChHH-HHHHHH
Confidence 3677999999 43333222234455554 46799999999995 668864
No 55
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=93.43 E-value=0.07 Score=47.62 Aligned_cols=46 Identities=20% Similarity=0.183 Sum_probs=36.8
Q ss_pred ccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 111 RLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 111 ~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
.|-||++||.+++ ..+...+++||++.++++|+.+||-|. .+|+.+
T Consensus 232 ~DGliLsGGPgdp---~~~~~~~~~Ir~~~~~~~PILGIClG~-QLLa~A 277 (379)
T 1a9x_B 232 PDGIFLSNGPGDP---APCDYAITAIQKFLETDIPVFGICLGH-QLLALA 277 (379)
T ss_dssp CSEEEECCCSBCS---TTCHHHHHHHHHHTTSCCCEEEETHHH-HHHHHH
T ss_pred CCEEEEeCCCCCh---HHHHHHHHHHHHHHHcCCCEEEECchH-HHHHHH
Confidence 5779999985432 245788899999998899999999995 678854
No 56
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=93.32 E-value=0.068 Score=45.32 Aligned_cols=47 Identities=15% Similarity=0.056 Sum_probs=35.5
Q ss_pred hhhccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhh
Q 026831 108 AARRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEP 159 (232)
Q Consensus 108 ~~~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~ 159 (232)
+...|.|++|||.+ .. ..+...++++.+.+.++|+.+||-|. .+|+.
T Consensus 65 ~~~~dgiil~GG~~-~~---~~~~~~~~i~~~~~~~~PilGIC~G~-Qll~~ 111 (273)
T 2w7t_A 65 LLGCDGIFVPGGFG-NR---GVDGKCAAAQVARMNNIPYFGVXLGM-QVAVI 111 (273)
T ss_dssp HHTCSEEEECCCCT-TT---THHHHHHHHHHHHHHTCCEEEETHHH-HHHHH
T ss_pred HhhCCEEEecCCCC-Cc---CchhHHHHHHHHHHCCCcEEEECcCH-HHHHH
Confidence 34567799999964 22 23457788998888899999999995 56764
No 57
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=92.42 E-value=0.18 Score=43.62 Aligned_cols=50 Identities=12% Similarity=-0.039 Sum_probs=32.8
Q ss_pred hccceeccCChhhHHhh---hcCHHHHHHHHHHHhCC--CcEEEEcchhHHhhhhc
Q 026831 110 RRLENARLGGLGGAQAF---AKSEKLVNMLKKQKESN--RPYGAICASPALVLEPH 160 (232)
Q Consensus 110 ~~d~livpGg~~~~~~~---~~~~~l~~~Lr~~~~~g--~~v~aic~G~~~lLA~a 160 (232)
..|.||+|||..+.... .....+.+++++..++| ++|.+||-|. .+|+.+
T Consensus 86 ~~dglil~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~-Qll~~a 140 (315)
T 1l9x_A 86 SINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGF-EELSLL 140 (315)
T ss_dssp HSSEEEECCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHH-HHHHHH
T ss_pred cCCEEEEeCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHH-HHHHHH
Confidence 46779999995332111 01135677777776654 9999999995 667743
No 58
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=89.60 E-value=0.16 Score=47.07 Aligned_cols=47 Identities=21% Similarity=0.233 Sum_probs=36.2
Q ss_pred hhhccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhh
Q 026831 108 AARRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEP 159 (232)
Q Consensus 108 ~~~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~ 159 (232)
+...|.|++|||.+.. ..+...++|+.+.++++++.+||-|. .+|+.
T Consensus 348 L~~~DgIIlpGG~G~~----~~~g~i~~ir~a~~~~~PiLGIClG~-Qll~v 394 (535)
T 3nva_A 348 LGNVNGIIVLPGFGSR----GAEGKIKAIKYAREHNIPFLGICFGF-QLSIV 394 (535)
T ss_dssp TTSCSEEEECCCCSST----THHHHHHHHHHHHHHTCCEEEETHHH-HHHHH
T ss_pred ccCCCEEEECCCCCCc----cHHHHHHHHHHHHHcCCcEEEECcch-hHHHH
Confidence 3346779999997422 33577889999999999999999995 55664
No 59
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=88.80 E-value=0.19 Score=46.98 Aligned_cols=50 Identities=14% Similarity=-0.035 Sum_probs=34.6
Q ss_pred hccceeccCC-hhhHH-hhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 110 RRLENARLGG-LGGAQ-AFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 110 ~~d~livpGg-~~~~~-~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
..|.||+||| ..... ....+..+.++|+++.++++++.+||.|. .+|+.+
T Consensus 44 ~~DglILpGgG~~~~~~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~-QlL~~a 95 (555)
T 1jvn_A 44 GTSRLILPGVGNYGHFVDNLFNRGFEKPIREYIESGKPIMGIXVGL-QALFAG 95 (555)
T ss_dssp TCSCEEEEECSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEEEHHH-HTTEEE
T ss_pred cCCEEEECCCCchHhHhhhhhhccHHHHHHHHHHcCCcEEEEchhh-hhhhhh
Confidence 4567899995 32111 11112236788999989999999999995 678875
No 60
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=87.43 E-value=0.49 Score=44.19 Aligned_cols=47 Identities=21% Similarity=0.193 Sum_probs=35.4
Q ss_pred hhccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 109 ARRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 109 ~~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
...|-||+|||.+.. ..+..+..++.+.++++|+.+||-|. -+|+.+
T Consensus 354 ~~~DGIILpGGfGd~----~~~g~i~~ir~a~e~~iPiLGICLGm-QlL~~a 400 (550)
T 1vco_A 354 RDVSGILVPGGFGVR----GIEGKVRAAQYARERKIPYLGICLGL-QIAVIE 400 (550)
T ss_dssp TTCSCEEECCCCSST----THHHHHHHHHHHHHTTCCEEEETHHH-HHHHHH
T ss_pred hcCCEEEECCCCCCc----chhhhHHHHHHHHHCCCcEEEECcCH-HHHHHH
Confidence 346779999997432 22456788888888899999999995 667643
No 61
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=87.33 E-value=0.67 Score=39.69 Aligned_cols=70 Identities=10% Similarity=0.038 Sum_probs=50.1
Q ss_pred HhhhccceeccCChhh-HHhhhcCHHHHHHHHHHHhCC-CcEEEEcchhHHhhhh----------------------cCC
Q 026831 107 KAARRLENARLGGLGG-AQAFAKSEKLVNMLKKQKESN-RPYGAICASPALVLEP----------------------HGL 162 (232)
Q Consensus 107 ~~~~~d~livpGg~~~-~~~~~~~~~l~~~Lr~~~~~g-~~v~aic~G~~~lLA~----------------------aGL 162 (232)
.+.+.|.|+|.||... .-....+..+.+.|++.+++| .++++.|.|+ .++.. .||
T Consensus 107 ~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA-~i~~~~m~~~g~s~~~p~~~~v~~~~GLGl 185 (291)
T 3en0_A 107 FVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGA-AVMGHHMIAGGSSGEWPNRALVDMAVGLGI 185 (291)
T ss_dssp HHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHH-HTTSSEEEEEECCSSCCCGGGEEEEECCCS
T ss_pred HHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHH-HhhhHheEcCCCCccCcccCceeecCcccc
Confidence 3456788999999631 222345778999999999999 8999999996 44431 367
Q ss_pred CCCCeeecCccchhh
Q 026831 163 LKGKKATAFPAMCNK 177 (232)
Q Consensus 163 L~g~~~T~h~~~~~~ 177 (232)
|.+-.+..|+..+..
T Consensus 186 l~~~~id~Hf~~r~R 200 (291)
T 3en0_A 186 VPEIVVDQHFHNRNR 200 (291)
T ss_dssp STTEEEECSTTTTTT
T ss_pred cCCCccccccCCcch
Confidence 777667788765443
No 62
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=86.57 E-value=0.51 Score=44.02 Aligned_cols=45 Identities=24% Similarity=0.250 Sum_probs=34.8
Q ss_pred hccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhh
Q 026831 110 RRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEP 159 (232)
Q Consensus 110 ~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~ 159 (232)
..|.||+|||.+.. ..+...++++.+.+.++|+.+||-|. -+|+.
T Consensus 343 ~~DGIilsGGpg~~----~~~g~~~~i~~a~~~~~PiLGIClG~-Qll~v 387 (545)
T 1s1m_A 343 GLDAILVPGGFGYR----GVEGMITTARFARENNIPYLGICLGM-QVALI 387 (545)
T ss_dssp TCSEEEECCCCSST----THHHHHHHHHHHHHTTCCEEEETHHH-HHHHH
T ss_pred cCCEEEECCCCCCc----cchhhHHHHHHHHHCCCcEEEECChH-HHHHH
Confidence 35679999997532 23567788998888899999999995 66774
No 63
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=85.89 E-value=0.17 Score=41.27 Aligned_cols=46 Identities=13% Similarity=0.016 Sum_probs=26.2
Q ss_pred hccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 110 RRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 110 ~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
..|.|++|||..... ++....+.+...+.++++.+||.|. .+|+.+
T Consensus 67 ~~dglil~Gg~~~~~----~~~~~~~~~~~~~~~~PilGIC~G~-Qll~~~ 112 (218)
T 2vpi_A 67 GFRAIIISGGPNSVY----AEDAPWFDPAIFTIGKPVLGICYGM-QMMNKV 112 (218)
T ss_dssp TCSEEEEEC-------------CCCCCGGGGTSSCCEEEETHHH-HHHHHH
T ss_pred CCCEEEECCCCcccc----cccchhHHHHHHHcCCCEEEEcHHH-HHHHHH
Confidence 367799999953221 1111122344456899999999995 668864
No 64
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=84.76 E-value=0.29 Score=45.71 Aligned_cols=49 Identities=16% Similarity=0.067 Sum_probs=30.4
Q ss_pred hccceeccCChhhHHhhhcCHHHH-HHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 110 RRLENARLGGLGGAQAFAKSEKLV-NMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 110 ~~d~livpGg~~~~~~~~~~~~l~-~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
..|.||+|||....... ..+.+. ..++.+.++++++.+||.|. .+|+.+
T Consensus 50 ~~dgIIlsGGp~s~~~~-~~~~~~~~l~~~a~~~g~PvLGIC~G~-QlLa~~ 99 (556)
T 3uow_A 50 NIKGVILSGGPYSVTEA-GSPHLKKEVFEYFLEKKIPIFGICYGM-QEIAVQ 99 (556)
T ss_dssp CEEEEEECCCSCCTTST-TCCCCCHHHHHHHHHTTCCEEEETHHH-HHHHHH
T ss_pred CCCEEEECCCCCccccc-CCcchhHHHHHHhhhcCCCEEEECHHH-HHHHHH
Confidence 34669999986433211 111122 33444566799999999995 668865
No 65
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=82.54 E-value=0.67 Score=44.09 Aligned_cols=49 Identities=20% Similarity=0.274 Sum_probs=34.5
Q ss_pred hccceeccCChhhHHhhhcC---HHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 110 RRLENARLGGLGGAQAFAKS---EKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 110 ~~d~livpGg~~~~~~~~~~---~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
..|.|||+||.++..+. .+ ..+.++|+++.+.++++.+||-|. -+|+.+
T Consensus 486 ~~DgIIlsGGPg~p~d~-~~p~i~~~~~lI~~a~~~~iPiLGIClG~-QlLa~a 537 (645)
T 3r75_A 486 RYDVVVMGPGPGDPSDA-GDPRIARLYAWLRHLIDEGKPFMAVCLSH-QILNAI 537 (645)
T ss_dssp GCSEEEECCCSSCTTCT-TSHHHHHHHHHHHHHHHHTCCEEEETHHH-HHHHHH
T ss_pred CCCEEEECCCCCChhhh-hhhhHHHHHHHHHHHHHCCCCEEEECHHH-HHHHHH
Confidence 35668888885433221 22 246788888888899999999995 668754
No 66
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=82.00 E-value=0.6 Score=36.92 Aligned_cols=42 Identities=14% Similarity=0.146 Sum_probs=25.5
Q ss_pred eeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 114 NARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 114 livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
+++.||.+...+ ......+++ ..+.++++.+||-|. .+|+.+
T Consensus 51 iil~gGpg~~~~---~~~~~~l~~-~~~~~~PilGIC~G~-Qll~~~ 92 (192)
T 1i1q_B 51 LMLSPGPGVPSE---AGCMPELLT-RLRGKLPIIGICLGH-QAIVEA 92 (192)
T ss_dssp EEECCCSSCGGG---STTHHHHHH-HHBTTBCEEEETHHH-HHHHHH
T ss_pred EEECCCCcCchh---CchHHHHHH-HHhcCCCEEEECcCh-HHHHHH
Confidence 666555433322 222333444 456789999999995 678864
No 67
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=71.83 E-value=1.5 Score=37.67 Aligned_cols=55 Identities=15% Similarity=0.049 Sum_probs=35.6
Q ss_pred hHHHhh--hccceeccCChhhH---HhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhh
Q 026831 104 EFEKAA--RRLENARLGGLGGA---QAFAKSEKLVNMLKKQKESNRPYGAICASPALVLE 158 (232)
Q Consensus 104 ~~~~~~--~~d~livpGg~~~~---~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA 158 (232)
+|+++. ..|.+||-|+.... .+..--+++.++++...++++++.+||-|+-.++.
T Consensus 91 ~f~~~~~~~~DglIITGap~~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~ 150 (301)
T 2vdj_A 91 TFRDIENEKFDGLIITGAPVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLY 150 (301)
T ss_dssp CHHHHTTSCEEEEEECCCTTTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHH
T ss_pred CcccccccccCEEEECCCCCcCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHH
Confidence 466652 35669999985211 11111257777887777899999999999633244
No 68
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=70.80 E-value=0.77 Score=42.50 Aligned_cols=45 Identities=13% Similarity=-0.009 Sum_probs=27.8
Q ss_pred ccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 111 RLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 111 ~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
+|.||+|||.... .++......+...+.++||.+||.|. .+|+.+
T Consensus 54 ~dgIILsGGp~sv----~~~~~~~~~~~~~~~~~PvLGIC~G~-Qlla~~ 98 (527)
T 3tqi_A 54 PHGIILSGGPETV----TLSHTLRAPAFIFEIGCPVLGICYGM-QTMAYQ 98 (527)
T ss_dssp CSEEEECCCCC-------------CCCSTTTSSSCEEEETHHH-HHHHHH
T ss_pred CCEEEECCcCccc----ccCCChhhHHHHHhcCCCEEEEChHH-HHHHHH
Confidence 4669999995322 12223334455677899999999995 668754
No 69
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=63.94 E-value=2.4 Score=36.59 Aligned_cols=48 Identities=13% Similarity=-0.029 Sum_probs=31.8
Q ss_pred ccceeccCChhhH---HhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhh
Q 026831 111 RLENARLGGLGGA---QAFAKSEKLVNMLKKQKESNRPYGAICASPALVLE 158 (232)
Q Consensus 111 ~d~livpGg~~~~---~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA 158 (232)
.|.+||-|+.... .+..--+++.++++...++++++.+||-|+-.++.
T Consensus 112 ~DglIITGsP~~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~ 162 (312)
T 2h2w_A 112 FDGFIITGAPVELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLY 162 (312)
T ss_dssp EEEEEECCCSCTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHH
T ss_pred cCEEEECCCCCCCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHH
Confidence 5668999985211 11111256777777777889999999999633244
No 70
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=60.55 E-value=1.4 Score=40.68 Aligned_cols=45 Identities=13% Similarity=0.055 Sum_probs=28.6
Q ss_pred ccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 111 RLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 111 ~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
+|.||+|||....... ..+.+ .+...+.++||.+||.|. .+|+.+
T Consensus 51 ~dgiILsGGp~s~~~~-~~~~~---~~~~~~~g~PvLGIC~G~-Qlla~~ 95 (525)
T 1gpm_A 51 PSGIILSGGPESTTEE-NSPRA---PQYVFEAGVPVFGVCYGM-QTMAMQ 95 (525)
T ss_dssp CSEEEECCCSSCTTST-TCCCC---CGGGGTSSSCEEEETHHH-HHHHHH
T ss_pred CCEEEECCcCcccccc-CCcch---HHHHHHCCCCEEEEChHH-HHHHHH
Confidence 4779999986322211 11111 244557899999999995 668853
No 71
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=57.51 E-value=1.5 Score=40.15 Aligned_cols=45 Identities=16% Similarity=0.060 Sum_probs=28.5
Q ss_pred ccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 111 RLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 111 ~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
.|.||+|||....... ..+.+ .+...+.++||.+||-|. .+|+.+
T Consensus 43 ~dgiIlsGGp~s~~~~-~~~~~---~~~~~~~~~PvLGIC~G~-Qlla~~ 87 (503)
T 2ywb_A 43 PQALILSGGPRSVFDP-DAPRP---DPRLFSSGLPLLGICYGM-QLLAQE 87 (503)
T ss_dssp CSEEEECCCSSCSSCT-TCCCC---CGGGGCSSCCEEEETHHH-HHHHHT
T ss_pred CCEEEECCCCchhccC-CCcch---HHHHHhCCCCEEEECHHH-HHHHHH
Confidence 3779999986322111 11111 244557899999999995 668865
No 72
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=48.18 E-value=3.3 Score=39.65 Aligned_cols=46 Identities=13% Similarity=0.026 Sum_probs=27.5
Q ss_pred hccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhc
Q 026831 110 RRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPH 160 (232)
Q Consensus 110 ~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~a 160 (232)
..|.||++||...... ...+. +.+...+.+++|.+||.|. .+|+.+
T Consensus 72 ~~dGIILsGGp~s~~~-~~~~~---~~~~i~~~g~PvLGIC~G~-QlLa~~ 117 (697)
T 2vxo_A 72 GFRAIIISGGPNSVYA-EDAPW---FDPAIFTIGKPVLGICYGM-QMMNKV 117 (697)
T ss_dssp TCSEEEEEECC--------CCC---CCGGGTTSSCCEEEEEHHH-HHHHHH
T ss_pred CCCEEEECCCCCcccC-ccchh---HHHHHHhCCCCEEEECHHH-HHHHHH
Confidence 4677999999642211 01111 1234456899999999995 678864
No 73
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=38.72 E-value=9.2 Score=29.58 Aligned_cols=105 Identities=19% Similarity=0.193 Sum_probs=59.5
Q ss_pred ccEEEEEecCCccc--ccccchhhhccCCCceEEEEeccccccCCccccccccceEEeeccCCccchhHHHhhhccceec
Q 026831 39 LEVILTTVAPGYFR--NHLMPKLLAVPNIEKFAHLIREQRRIFQPEEEEEEEEEVRVIRKSEDNMSREFEKAARRLENAR 116 (232)
Q Consensus 39 ~~~I~iLl~~gf~~--~el~p~~~a~~~~~~~~~~v~~~~~~~~pv~s~~~~~Gl~v~~~~~~~~~~~~~~~~~~d~liv 116 (232)
..+|.++--|||+. .+|.. ++.+. .+.+.+-. .++-...+-.....|..+. . ..+ +..|.|++
T Consensus 26 ~~kIvf~Gs~GvCtPFaeL~~--YaiR~--~~~~FiP~-~d~e~a~~l~~~~~G~~~~------~---~~~-~~~D~vVl 90 (157)
T 2r47_A 26 AERIGFAGVPGVCTPFAQLFA--YAVRD--KDNIFIPN-TDFSKARKLEVTEYGVELG------E---ISP-GNVDVLVL 90 (157)
T ss_dssp CSEEEEEECTTTTHHHHHHHH--HHTTT--SEEEEEET-TCGGGCEEEEEETTEEEEE------E---ECC-CCEEEEEE
T ss_pred CCeEEEECCCeeecCHHhhhe--eeeeC--CceEEcCC-CChhHceEEEEecCceEec------c---ccC-CCCCEEEE
Confidence 67999999999875 23331 11122 23222221 1100000100012366665 1 111 36788999
Q ss_pred cCChhhHHhh-hcCHHHHHHHHHHHhCCCcEEEEcchhHHhhhhcC
Q 026831 117 LGGLGGAQAF-AKSEKLVNMLKKQKESNRPYGAICASPALVLEPHG 161 (232)
Q Consensus 117 pGg~~~~~~~-~~~~~l~~~Lr~~~~~g~~v~aic~G~~~lLA~aG 161 (232)
-||.. +... ...+++.+.|.+..+.++.|.++|-=. ++.++|
T Consensus 91 lGGLA-MPk~~v~~e~v~~li~ki~~~~~kiiGvCFms--~F~kag 133 (157)
T 2r47_A 91 LGGLS-MPGIGSDIEDVKKLVEDALEEGGELMGLCYMD--MFARAG 133 (157)
T ss_dssp EGGGG-STTTSCCHHHHHHHHHHHEEEEEEEEEEEETT--HHHHTT
T ss_pred ecccc-CCCCCCCHHHHHHHHHHhhcCCCCEEEEEhHH--HHHHcC
Confidence 99974 4433 345678888888866677799999885 368887
No 74
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=21.33 E-value=64 Score=24.95 Aligned_cols=39 Identities=13% Similarity=0.070 Sum_probs=29.6
Q ss_pred HhhhccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcc
Q 026831 107 KAARRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICA 151 (232)
Q Consensus 107 ~~~~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~ 151 (232)
++.+.|.++|..-. .+|+..++..++..++|.++.+||+
T Consensus 74 ~i~~~D~vii~S~S------g~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 74 TLHAVDRVLIFTPD------TERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CCCTTCEEEEEESC------SCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCCCEEEEEeCC------CCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 33345666664432 2578899999999999999999998
No 75
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=20.89 E-value=92 Score=23.33 Aligned_cols=37 Identities=24% Similarity=0.203 Sum_probs=27.8
Q ss_pred hccceeccCChhhHHhhhcCHHHHHHHHHHHhCCCcEEEEcch
Q 026831 110 RRLENARLGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICAS 152 (232)
Q Consensus 110 ~~d~livpGg~~~~~~~~~~~~l~~~Lr~~~~~g~~v~aic~G 152 (232)
+.|.+|+....+ .++++++.++.+.++|.++.+|+.-
T Consensus 110 ~~Dvvi~iS~sG------~t~~~~~~~~~ak~~g~~vi~iT~~ 146 (188)
T 1tk9_A 110 EKDVLIGISTSG------KSPNVLEALKKAKELNMLCLGLSGK 146 (188)
T ss_dssp TTCEEEEECSSS------CCHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred CCCEEEEEeCCC------CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 455566665432 4678999999999999999999863
Done!