BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026833
(232 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 68/100 (68%), Gaps = 4/100 (4%)
Query: 83 LETLLRNFAGKD----GQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAR 138
LE L++ A D G PPASK++++A+P++KV + ++ +C VC++E+E G +
Sbjct: 171 LEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVK 230
Query: 139 EMPCKHKFHANCIEKWLGINGSCPVCRYKMPVEEEESGNK 178
+MPCKH FH +C+ WL ++ SCPVCR+++P ++ + N+
Sbjct: 231 QMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDDPDYENR 270
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 86/158 (54%), Gaps = 15/158 (9%)
Query: 62 ERIILVNPLNQGMVVIEGTSS------LETLLRNFAGKD----GQPPASKASVEAMPSIK 111
E +I NP +QG + LE L++ A D G PPASK+++EA+P +
Sbjct: 152 EFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVN 211
Query: 112 VGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKMPVE 171
+ +S + +C VC++++E G A++MPCKH +H +C+ WL ++ SCPVCR+++P +
Sbjct: 212 ITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTD 271
Query: 172 EEESGNKRDERRREIWVSFSISGGGRRSGENSNQNEST 209
+ + ERR S G SG+ S+ + T
Sbjct: 272 DPDY-----ERRVRGAQGTSGGNDGDNSGQRSDGDNRT 304
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 66 LVNPLNQGMVVIEGTSSLETLLRNFAGKDGQPPASKASVEAMPSIKVGESEEEALGGECV 125
L L QG+ + G+ L + PPA+KA V+++P + + E+ G +C
Sbjct: 27 LARSLMQGLDIDSGSFDLSDWDQRLP-----PPAAKAVVQSLPVVIIS-PEQADKGVKCP 80
Query: 126 VCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKMPVE--EEESGNKRDERR 183
VCL E+E E REMPCKH FH CI WL SCP+CR ++P + + E K ERR
Sbjct: 81 VCLLEFEEQESVREMPCKHLFHTGCILPWLNKTNSCPLCRLELPTDNADYEEFKKDKERR 140
Query: 184 RE 185
R+
Sbjct: 141 RQ 142
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 84.3 bits (207), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 97 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLG 156
PPASK VE++P + V + +A +C VCL E+E GE R++PC+H FH+ CI WLG
Sbjct: 53 PPASKKVVESLPKVTVTPEQADA-ALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLG 111
Query: 157 INGSCPVCRYKMPVEEEESGNKRDERRR 184
SCP+CR+++P + + + E+ R
Sbjct: 112 KTNSCPLCRHELPTDSPDYEEFKQEKAR 139
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 64 IILVNPLNQGMVVIEGTSSLETLLRNFAGKDGQPPASKASVEAMPSIKVGESEEEALGGE 123
++ NP++ G ++ T L N G PPA ++A+P+I++ E E G E
Sbjct: 170 VLHSNPMDYAWGA-NGLDTIITQLLNQFENTGPPPADTDKIQALPTIQITE-EHVGFGLE 227
Query: 124 CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKM 168
C VC E+Y VGE R++PC H FH +CI WL + +CPVCR +
Sbjct: 228 CPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 97 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLG 156
PPA+K VE++P + V + +A +C VCL E+E GE R++PC+H FH++CI WLG
Sbjct: 53 PPAAKKVVESLPKVTVTPEQADA-ALKCPVCLLEFEEGETVRQLPCEHLFHSSCILPWLG 111
Query: 157 INGSCPVCRYKMPVE 171
SCP+CR+++P +
Sbjct: 112 KTNSCPLCRHELPTD 126
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 64 IILVNPLNQGMVVIEGTSSLETLLRNFAGKDGQPPASKASVEAMPSIKVGESEEEALGGE 123
++ NP++ G ++ T L N G PPA ++A+P+I++ E E G E
Sbjct: 170 VLHSNPMDYAWGA-NGLDTIITQLLNQFENTGPPPADNEKIQALPTIQITE-EHVGSGLE 227
Query: 124 CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKM 168
C VC E+Y VGE R++PC H FH +CI WL + +CPVCR +
Sbjct: 228 CPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 64 IILVNPLNQGMVVIEGTSSLETLLRNFAGKDGQPPASKASVEAMPSIKVGESEEEALGGE 123
++ NP++ G ++ T L N G PPA K ++A+P++ V E E G E
Sbjct: 173 VLHSNPMDYAWGA-NGLDTIITQLLNQFENTGPPPADKEKIQALPTVPVTE-EHVGSGLE 230
Query: 124 CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKM 168
C VC E+Y +GE R++PC H FH +CI WL + SCPVCR +
Sbjct: 231 CPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 275
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 97 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLG 156
PPA+KA VE++P + ++ + +C VCL E+E E EMPC H FH+NCI WL
Sbjct: 64 PPAAKAVVESLPRTVISSAKADL---KCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLS 120
Query: 157 INGSCPVCRYKMPVEEEES-GNKRDERRRE 185
SCP+CR+++P +++ +K+D+ RR+
Sbjct: 121 KTNSCPLCRHELPTDDDSYEEHKKDKARRQ 150
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 64 IILVNPLNQGMVVIEGTSSLETLLRNFAGKDGQPPASKASVEAMPSIKVGESEEEALGGE 123
++ NP++ G ++ T L N G PPA ++A+P+I++ E E G E
Sbjct: 169 VLHSNPMDYAWGA-NGLDTIITQLLNQFENTGPPPADTEKIQALPTIQITE-EHVGSGLE 226
Query: 124 CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKM 168
C VC E+Y VGE R++PC H FH +CI WL + +CPVCR +
Sbjct: 227 CPVCKEDYTVGESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 271
>sp|Q8NG27|PJA1_HUMAN E3 ubiquitin-protein ligase Praja-1 OS=Homo sapiens GN=PJA1 PE=1
SV=2
Length = 643
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 10/118 (8%)
Query: 61 SERIILVNPLNQGMVVIEG--TSSLETLLRNFAG-----KDGQPPASKASVEAMPSIKVG 113
+E I V+P + +E ++ET L + + PPASK S++A+P I V
Sbjct: 524 AEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVT 583
Query: 114 ESEEEALGGE--CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKMP 169
E + A+G E C +C EY GEVA E+PC H FH C+ WL +G+CPVCR P
Sbjct: 584 E-DHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 640
>sp|O55176|PJA1_MOUSE E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus GN=Pja1 PE=1
SV=3
Length = 578
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 10/118 (8%)
Query: 61 SERIILVNPLNQGMVVIEG--TSSLETLLRNFAG-----KDGQPPASKASVEAMPSIKVG 113
+E I V+P + +E ++ET L + + PPASK S++A+P I V
Sbjct: 459 AEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVT 518
Query: 114 ESEEEALGGE--CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKMP 169
E + A+G E C +C EY GEVA E+PC H FH C+ WL +G+CPVCR P
Sbjct: 519 E-DHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 575
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 64 IILVNPLNQGMVVIEGTSSLETLLRNFAGKDGQPPASKASVEAMPSIKVGESEEEALGGE 123
++ NP++ G ++ T L N G PPA K ++A+P++ V E E G E
Sbjct: 171 VLHSNPMDYAWGA-NGLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTE-EHVGSGLE 228
Query: 124 CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKM 168
C VC ++Y +GE R++PC H FH CI WL + SCPVCR +
Sbjct: 229 CPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 273
>sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8
PE=1 SV=1
Length = 334
Score = 80.5 bits (197), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 9/114 (7%)
Query: 77 IEGTSSLETLLRNFA--------GKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCL 128
I+ + E LL+N A G+ G PPA+K+++EA+ + +V SE E + C VC
Sbjct: 203 IDDAAGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMV-CAVCK 261
Query: 129 EEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKMPVEEEESGNKRDER 182
+ +GE +++PC H +H +CI WLG SCPVCR+++ ++ E +R +R
Sbjct: 262 DGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEERKKR 315
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 64 IILVNPLNQGMVVIEGTSSLETLLRNFAGKDGQPPASKASVEAMPSIKVGESEEEALGGE 123
++ NP++ G ++ T L N G PPA K ++A+P++ V E E G E
Sbjct: 174 VLHSNPMDYAWGA-NGLDAIITQLLNQFENTGPPPADKEKIQALPTVPVTE-EHVGSGLE 231
Query: 124 CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKM 168
C VC ++Y +GE R++PC H FH CI WL + SCPVCR +
Sbjct: 232 CPVCKDDYGLGEHVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 276
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 79 GTSSLETLLRNFAGK---DGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGE 135
G + L+ ++ G+ G PPA K + ++P++ V + E+ +G EC VC E+Y V E
Sbjct: 181 GQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQ-EQVDMGLECPVCKEDYTVEE 239
Query: 136 VAREMPCKHKFHANCIEKWLGINGSCPVCRYKM 168
R++PC H FH++CI WL ++ +CPVCR +
Sbjct: 240 EVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 272
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 79 GTSSLETLLRNFAGK---DGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGE 135
G + L+ ++ G+ G PPA K + ++P++ V + E+ G EC VC E+Y V E
Sbjct: 182 GQTGLDAIVTQLLGQLENTGPPPADKEKITSLPTVTVTQ-EQVNTGLECPVCKEDYTVEE 240
Query: 136 VAREMPCKHKFHANCIEKWLGINGSCPVCRYKM 168
R++PC H FH++CI WL ++ +CPVCR +
Sbjct: 241 KVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSL 273
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
Query: 76 VIEGTSSLETLLRNFAGKDGQPPASKASVEAMPSIKVGESEEEALGGE--CVVCLEEYEV 133
+I G + + + G PPASK VE +P I E + G E C +C E +
Sbjct: 180 LINGLDMIIPDILDDGGPPRAPPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVI 239
Query: 134 GEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKMPVEEEESGN 177
G+ +E+PCKH FH C++ WL + SCP+CR+++P ++++ N
Sbjct: 240 GDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTDDQKYEN 283
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 100 SKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGING 159
+KA +E +PS + ++ CVVC ++EV ++ R +PC H+FHA C++KWL N
Sbjct: 274 TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANR 333
Query: 160 SCPVCR 165
+CP+CR
Sbjct: 334 TCPICR 339
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 100 SKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGING 159
+KA +E +PS + ++ CVVC ++EV ++ R +PC H+FHA C++KWL N
Sbjct: 331 TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANR 390
Query: 160 SCPVCR 165
+CP+CR
Sbjct: 391 TCPICR 396
>sp|Q3T0W3|RN181_BOVIN E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2
SV=1
Length = 153
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 97 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLG 156
PPA+K +VE +P + S+ E +C VCL E+E E A EMPC H FH+NCI WL
Sbjct: 52 PPAAKTAVENLPRTVIRGSQAEL---KCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLS 108
Query: 157 INGSCPVCRYKMPVEEEES-GNKRDERRRE 185
SCP+CR+++P +++ +KRD+ R++
Sbjct: 109 KTNSCPLCRHELPTDDDTYEEHKRDKARKQ 138
>sp|Q6AXU4|RN181_RAT E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181
PE=1 SV=1
Length = 165
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 97 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLG 156
PPA+KA VE++P + S+ E +C VCL E+E E EMPC H FH+NCI WL
Sbjct: 64 PPAAKAVVESLPRTVIRSSKAEL---KCPVCLLEFEEEETVIEMPCHHLFHSNCILPWLS 120
Query: 157 INGSCPVCRYKMPVEEEES-GNKRDERRRE 185
SCP+CR+++P +++ +K+D+ RR+
Sbjct: 121 KTNSCPLCRHELPTDDDSYEEHKKDKARRQ 150
>sp|Q80U04|PJA2_MOUSE E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1
SV=2
Length = 707
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 61 SERIILVNPLNQGMVVIEG--TSSLETLLRNFAG-----KDGQPPASKASVEAMPSIKVG 113
+E I V+P + +E ++ET L + + PPASK S++ +P V
Sbjct: 562 AEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVL 621
Query: 114 ESEEEALGGE--CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKMP 169
E + A+G E C +C EY ++A E+PC H FH C+ WL +G+CPVCR P
Sbjct: 622 E-DHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFP 678
>sp|O43164|PJA2_HUMAN E3 ubiquitin-protein ligase Praja-2 OS=Homo sapiens GN=PJA2 PE=1
SV=4
Length = 708
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 61 SERIILVNPLNQGMVVIEG--TSSLETLLRNFAG-----KDGQPPASKASVEAMPSIKVG 113
+E I V+P + +E ++ET L + + PPASK S++ +P V
Sbjct: 563 AEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVL 622
Query: 114 ESEEEALGGE--CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKMP 169
E + A+G E C +C EY ++A E+PC H FH C+ WL +G+CPVCR P
Sbjct: 623 E-DHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFP 679
>sp|Q9P0P0|RN181_HUMAN E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1
SV=1
Length = 153
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 4/90 (4%)
Query: 97 PPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLG 156
PPA+K VE +P + S+ E +C VCL E+E E A EMPC H FH++CI WL
Sbjct: 52 PPAAKTVVENLPRTVIRGSQAEL---KCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLS 108
Query: 157 INGSCPVCRYKMPVEEEES-GNKRDERRRE 185
SCP+CRY++P +++ ++RD+ R++
Sbjct: 109 KTNSCPLCRYELPTDDDTYEEHRRDKARKQ 138
>sp|Q63364|PJA2_RAT E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2
PE=2 SV=1
Length = 707
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 61 SERIILVNPLNQGMVVIEG--TSSLETLLRNFAG-----KDGQPPASKASVEAMPSIKVG 113
+E I V+P + +E ++ET L + + PPASK S++ +P V
Sbjct: 562 AEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVL 621
Query: 114 ESEEEALGGE--CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKMP 169
E + A+G E C +C EY ++A E+PC H FH C+ WL +G+CPVCR P
Sbjct: 622 E-DHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFP 678
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 100 SKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGING 159
+KA +E +PS + S ++ CVVC+ ++E ++ R +PC H+FHA C++KWL N
Sbjct: 442 TKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNR 501
Query: 160 SCPVCR 165
+CP+CR
Sbjct: 502 TCPICR 507
>sp|Q5R4R1|PJA2_PONAB E3 ubiquitin-protein ligase Praja-2 OS=Pongo abelii GN=PJA2 PE=2
SV=1
Length = 708
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 61 SERIILVNPLNQGMVVIEG--TSSLETLLRNFAG-----KDGQPPASKASVEAMPSIKVG 113
+E I V+P + +E ++ET L + + PPASK S++ +P V
Sbjct: 563 AEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVL 622
Query: 114 ESEEEALGGE--CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKMP 169
E + A+G E C +C EY ++A E+PC H FH C+ WL +G+CPVCR P
Sbjct: 623 E-DHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFP 679
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 73.9 bits (180), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 100 SKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGING 159
+KA +E +PS + + ++ CVVC+ ++E ++ R +PC H+FHA C++KWL N
Sbjct: 439 TKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANR 498
Query: 160 SCPVCR 165
+CP+CR
Sbjct: 499 TCPICR 504
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 100 SKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGING 159
+KA +E +PS + ++ CVVC ++E ++ R +PC H+FHA C++KWL N
Sbjct: 372 TKADIEQLPSYRFNLENHQSEQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNR 431
Query: 160 SCPVCR 165
+CP+CR
Sbjct: 432 TCPICR 437
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 100 SKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGING 159
+KA +E +PS + ++ CVVC ++E ++ R +PC H+FH C++KWL N
Sbjct: 356 TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANR 415
Query: 160 SCPVCR 165
+CP+CR
Sbjct: 416 TCPICR 421
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 101 KASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMP-CKHKFHANCIEKWLGING 159
++ +E++P + G G EC VCL +E EV R +P CKH FH C++ WL +
Sbjct: 123 RSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHS 182
Query: 160 SCPVCRYKMPVEE 172
+CP+CRY++ E+
Sbjct: 183 TCPLCRYRVDPED 195
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 83 LETLLRNFAGKDGQPPASKASVEAMPSIKVGESEEEALG--GECVVCLEEYEVGEVAREM 140
+ L+ G + PA + + M KV + +E + GEC +C+E +++ + ++
Sbjct: 356 ISQLMEQAQGHNAPAPAPEDVIAKM---KVQKPPKELIDEEGECTICMEMFKINDDVIQL 412
Query: 141 PCKHKFHANCIEKWLGINGSCPVCR 165
PCKH FH NCI+ WL +NG+C +CR
Sbjct: 413 PCKHYFHENCIKPWLRVNGTCAICR 437
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 88 RNFAGKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMP-CKHKF 146
R+ A D K ++E++P + + G +C VCL ++E E+ R +P C+H F
Sbjct: 87 RSTASSDRFSGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAF 146
Query: 147 HANCIEKWLGINGSCPVCRYKMPVEEEES 175
H CI++WL + +CP+CR ++ +EE+ S
Sbjct: 147 HIGCIDQWLEQHATCPLCRDRVSMEEDSS 175
>sp|Q8GYT9|SIS3_ARATH E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3
PE=2 SV=2
Length = 358
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 95 GQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKW 154
Q A +A ++ +P ++ ++ GEC++CLEE+ +G R +PC H FH CI++W
Sbjct: 208 AQTEAVEALIQELPKFRLKAVPDDC--GECLICLEEFHIGHEVRGLPCAHNFHVECIDQW 265
Query: 155 LGINGSCPVCR 165
L +N CP CR
Sbjct: 266 LRLNVKCPRCR 276
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 52/87 (59%), Gaps = 7/87 (8%)
Query: 90 FAGKDGQPPASKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMP-CKHKFHA 148
F+G D K ++E++P + + G EC VCL ++E E+ R +P C+H FH
Sbjct: 96 FSGLD------KKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHI 149
Query: 149 NCIEKWLGINGSCPVCRYKMPVEEEES 175
CI++WL + +CP+CR ++ +E++ S
Sbjct: 150 GCIDQWLEQHATCPLCRNRVNIEDDLS 176
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 124 CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYK 167
C VCLE+ VGE+ R +PC H+FHA CI+ WL G+CPVC+++
Sbjct: 211 CSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKFR 254
>sp|Q9VE61|RN181_DROME E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila
melanogaster GN=CG7694 PE=2 SV=1
Length = 147
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 97 PPASKASVEAMPSIKVGESEEEALGG--ECVVCLEEYEVGEVAREMPCKHKFHANCIEKW 154
P ASK ++ +P ++ +S+E GG EC VC E E G+ R +PCKH+FH CI W
Sbjct: 44 PEASKRAILELPVHEIVKSDE---GGDLECSVCKEPAEEGQKYRILPCKHEFHEECILLW 100
Query: 155 LGINGSCPVCRYKM----PVEEEESGNKRDERRR 184
L SCP+CRY++ PV EE ++DE R
Sbjct: 101 LKKTNSCPLCRYELETDDPVYEELRRFRQDEANR 134
>sp|Q9LN71|RING1_ARATH E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana
GN=At1g12760 PE=2 SV=1
Length = 408
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 122 GECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKM 168
EC +CL YE G RE+PC H FH +C++KWL IN +CP+C+Y +
Sbjct: 351 AECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNI 397
>sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana
GN=At4g11680 PE=2 SV=1
Length = 390
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 122 GECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKM 168
EC +CL EYE G RE+PC H FH CI+KWL IN CP+C++ +
Sbjct: 336 AECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCKFNI 382
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 72 QGMVVIEGTSSLETL-LRNF----AGKDGQPPA-SKASVEAMPSIKVGESEEEALGGECV 125
+G V E + SL L L F D QP +K ++ + + GE++ AL C
Sbjct: 513 RGAVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNFGEND--ALK-TCS 569
Query: 126 VCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKMPV 170
VC+ EY G R++PC H++H +CI++WL N +CP+CR + V
Sbjct: 570 VCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVLV 614
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 101 KASVEAMPSIKVGESEEEALGG---ECVVCLEEYEVGEVAREMP-CKHKFHANCIEKWLG 156
K VE+ P E + +G EC +CL E+ E R MP C H FHANCI+ WL
Sbjct: 97 KELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLS 156
Query: 157 INGSCPVCR----------YKMPVEEEESGN-KRDE 181
+CP CR Y P+ + E+GN +RDE
Sbjct: 157 SQSTCPACRANLSLKPGESYPYPITDLETGNEQRDE 192
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 120 LGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCR 165
LG C VC+ +Y G R++PC H+FH +CI++WL N +CPVCR
Sbjct: 610 LGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCR 655
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 120 LGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCR 165
LG C VC+ +Y G R++PC H+FH +CI++WL N +CP+CR
Sbjct: 628 LGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICR 673
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 72 QGMVVIEGTSSLETL-LRNF----AGKDGQPPA-SKASVEAMPSIKVGESEEEALGGECV 125
+G V E + SL L L F D QP +K ++ + + GE++ AL C
Sbjct: 530 RGGVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNFGEND--ALK-TCS 586
Query: 126 VCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKMPV 170
VC+ EY G R++PC H++H +CI++WL N +CP+CR + V
Sbjct: 587 VCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLV 631
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 13/113 (11%)
Query: 72 QGMVVIEGTSSLETL-LRNF----AGKDGQPPA-SKASVEAMPSIKVGESEEEALGGECV 125
+G V +E + SL L L F D QP +K ++ + + GE++ AL C
Sbjct: 648 RGGVTLEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNYGEND--ALKT-CS 704
Query: 126 VCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCRYKMPVEEEESGNK 178
VC+ EY G R++PC H++H +CI++WL N +CP+CR + V +GN+
Sbjct: 705 VCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVLV----AGNR 753
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 94 DGQPPA-SKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIE 152
D QP +K ++ + GE++ AL C VC+ EY G R++PC H++H +CI+
Sbjct: 542 DDQPRGLTKEQIDNLAMRSFGEND--ALK-TCSVCITEYTEGNKLRKLPCSHEYHVHCID 598
Query: 153 KWLGINGSCPVCR 165
+WL N +CP+CR
Sbjct: 599 RWLSENSTCPICR 611
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 102 ASVEAMPSIKVGESEEEALGG---ECVVCLEEYEVGEVAREMP-CKHKFHANCIEKWLGI 157
A VE+ P +E +G EC +CL E E E R +P C H FH +CI+ WL
Sbjct: 99 AVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYS 158
Query: 158 NGSCPVCRYKMPVEEEESGNKRD 180
+ +CPVCR + + + G++ D
Sbjct: 159 HATCPVCRSNLTAKSNKPGDEDD 181
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 101 KASVEAMPSIKVGESEEEALGG---ECVVCLEEYEVGEVAREMP-CKHKFHANCIEKWLG 156
K +E+ P+ E + +G EC +CL E+E E R MP C H FHANCI+ WL
Sbjct: 97 KEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLS 156
Query: 157 INGSCPVCRYKMPVEEEES 175
+CPVCR + ++ ES
Sbjct: 157 SWSTCPVCRANLSLKPGES 175
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 124 CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGINGSCPVCR 165
C VC+ EY G R++PC H++H +CI++WL N +CP+CR
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 587
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.126 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,454,319
Number of Sequences: 539616
Number of extensions: 3773208
Number of successful extensions: 12123
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 204
Number of HSP's that attempted gapping in prelim test: 11258
Number of HSP's gapped (non-prelim): 891
length of query: 232
length of database: 191,569,459
effective HSP length: 114
effective length of query: 118
effective length of database: 130,053,235
effective search space: 15346281730
effective search space used: 15346281730
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 59 (27.3 bits)