BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026834
(232 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IIR|A Chain A, Crystal Structure Of Miraculin Like Protein From Seeds Of
Mu Koenigii
pdb|3IIR|B Chain B, Crystal Structure Of Miraculin Like Protein From Seeds Of
Mu Koenigii
Length = 190
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 120/203 (59%), Gaps = 25/203 (12%)
Query: 28 EPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLG 87
+P+LD+ GN V++S YYLVS + G GGG++ +G+N CP DVIQLSP +G L
Sbjct: 1 DPLLDINGNVVEASRDYYLVSVI-GGAGGGGLTLYRGRNELCPLDVIQLSPDLHKGTRLR 59
Query: 88 LLPYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIG--EG---- 141
Y+N++I+ E+ ++ +KFS +S CN+ ++W+VDN + S GK FIT G EG
Sbjct: 60 FAAYNNTSIIHEAVDLNVKFSTETS---CNEPTVWRVDNYDPSRGKWFITTGGVEGNPGA 116
Query: 142 KTCQNFFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKDVGVSNVDGVQRL 201
+T +N+FKLE+V Y+IVHC ++ SC LC DVGVS D +RL
Sbjct: 117 QTLKNWFKLERVGTD----------QGTYEIVHCPSVCK-SCVFLCNDVGVS-YDYRRRL 164
Query: 202 VVVDDNDQPNLPLPVVLFPADSG 224
+ N++ VV+ PA+ G
Sbjct: 165 ALTAGNER---VFGVVIVPANEG 184
>pdb|3S8J|A Chain A, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 2.6a Resolution
pdb|3S8J|B Chain B, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 2.6a Resolution
pdb|3S8K|A Chain A, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 1.7a Resolution
pdb|3S8K|B Chain B, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 1.7a Resolution
Length = 184
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 13/152 (8%)
Query: 28 EPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLG 87
+PI+D+ G V Y++VSA+WG GG G +CP V+Q P D G+ +
Sbjct: 4 KPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQ-DPFDN-GEPII 61
Query: 88 LLPYDN--STIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGKTCQ 145
N IVRES ++ +KF+ + CN+ + WKVD +G +T+G K
Sbjct: 62 FSAIKNVKDNIVRESVDLNVKFNITIN---CNETTAWKVDRFPGVIGWT-VTLGGEKGYH 117
Query: 146 NFFKLEKVSASIFDMKIALDIPCLYKIVHCST 177
F + + S+F +K A +P YK C +
Sbjct: 118 GF----ESTHSMFKIKKA-GLPFSYKFHFCPS 144
>pdb|3TC2|A Chain A, Crystal Structure Of Potato Serine Protease Inhibitor.
pdb|3TC2|B Chain B, Crystal Structure Of Potato Serine Protease Inhibitor.
pdb|3TC2|C Chain C, Crystal Structure Of Potato Serine Protease Inhibitor
Length = 187
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 24/191 (12%)
Query: 25 SESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKN--GQCPTDVIQ----LSP 78
S++ P+LDV G ++D Y ++S WG GG + K N C V + + P
Sbjct: 3 SDATPVLDVTGKELDPRLSYRIISTFWGA-LGGDVYLGKSPNSDAPCANGVFRYNSDVGP 61
Query: 79 KDKRGKNLGLLPYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITI 138
+ +G + I E + ++F+ +S+ + C ++WKV + +ASLG +
Sbjct: 62 SGTPVRFIGSSSHFGQGIF-EDELLNIQFA-ISTSKMCVSYTIWKVGDYDASLGTMLLET 119
Query: 139 GE--GKTCQNFFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKDVGVSNVD 196
G G+ ++FK+ V +S F Y +++C + S D C VGV + +
Sbjct: 120 GGTIGQADSSWFKI--VKSSQFG----------YNLLYCP-VTTSSDDQFCLKVGVVHQN 166
Query: 197 GVQRLVVVDDN 207
G +RL +V DN
Sbjct: 167 GKRRLALVKDN 177
>pdb|1BA7|A Chain A, Soybean Trypsin Inhibitor
pdb|1BA7|B Chain B, Soybean Trypsin Inhibitor
pdb|1AVU|A Chain A, Trypsin Inhibitor From Soybean (Sti)
Length = 181
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 27/181 (14%)
Query: 30 ILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLL 89
+LD GN +++ YY++S + GGI A N +CP V+Q +++ K +G +
Sbjct: 3 VLDNEGNPLENGGTYYILSD---ITAFGGIRAAPTGNERCPLTVVQ--SRNELDKGIGTI 57
Query: 90 ---PYDNSTIVRESTNIKLKFSRVSSLQQC-NKDSLWKVDNDNASLGKQFITIGEGKTCQ 145
PY + E + LKF + + C + W V D + IGE K
Sbjct: 58 ISSPY-RIRFIAEGHPLSLKFDSFAVIMLCVGIPTEWSVVEDLPE--GPAVKIGENKDAM 114
Query: 146 N-FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKDVGVS--NVDGVQRLV 202
+ +F+LE+VS F+ YK+V C D C D+G+S + DG +RLV
Sbjct: 115 DGWFRLERVSDDEFNN---------YKLVFCPQQAE---DDKCGDIGISIDHDDGTRRLV 162
Query: 203 V 203
V
Sbjct: 163 V 163
>pdb|1AVW|B Chain B, Complex Porcine Pancreatic TrypsinSOYBEAN TRYPSIN
Inhibitor, Orthorhombic Crystal Form
pdb|1AVX|B Chain B, Complex Porcine Pancreatic TrypsinSOYBEAN TRYPSIN
Inhibitor, Tetragonal Crystal Form
Length = 177
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 27/181 (14%)
Query: 30 ILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLL 89
+LD GN +++ YY++S + GGI A N +CP V+Q +++ K +G +
Sbjct: 3 VLDNEGNPLENGGTYYILSD---ITAFGGIRAAPTGNERCPLTVVQ--SRNELDKGIGTI 57
Query: 90 ---PYDNSTIVRESTNIKLKFSRVSSLQQC-NKDSLWKVDNDNASLGKQFITIGEGKTCQ 145
PY + E + LKF + + C + W V D + IGE K
Sbjct: 58 ISSPY-RIRFIAEGHPLSLKFDSFAVIMLCVGIPTEWSVVEDLPE--GPAVKIGENKDAM 114
Query: 146 N-FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKDVGVS--NVDGVQRLV 202
+ +F+LE+VS F+ YK+V C D C D+G+S + DG +RLV
Sbjct: 115 DGWFRLERVSDDEFNN---------YKLVFCPQQAE---DDKCGDIGISIDHDDGTRRLV 162
Query: 203 V 203
V
Sbjct: 163 V 163
>pdb|1AVA|C Chain C, Amy2BASI PROTEIN-Protein Complex From Barley Seed
pdb|1AVA|D Chain D, Amy2BASI PROTEIN-Protein Complex From Barley Seed
pdb|3BX1|D Chain D, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|3BX1|C Chain C, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
Length = 181
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 33/177 (18%)
Query: 25 SESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGK 84
++ P+ D G+++ + YY++SA GGG++ G CP V Q G
Sbjct: 1 ADPPPVHDTDGHELRADANYYVLSA--NRAHGGGLTMAPGHGRHCPLFVSQDPNGQHDGF 58
Query: 85 NLGLLPYD---NSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEG 141
+ + PY + I+R ST++++ F ++ C + + W +D++ A+ G++ + G
Sbjct: 59 PVRITPYGVAPSDKIIRLSTDVRISFRAYTT---CLQSTEWHIDSELAA-GRRHVITGPV 114
Query: 142 KTC-----QNFFKLEKVS-ASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKDVGV 192
K +N F++EK S A + + K+ SC C+D+GV
Sbjct: 115 KDPSPSGRENAFRIEKYSGAEVHEYKLM------------------SCGDWCQDLGV 153
>pdb|2IWT|B Chain B, Thioredoxin H2 (Hvtrxh2) In A Mixed Disulfide Complex With
The Target Protein Basi
Length = 189
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 24 ASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRG 83
A++ P+ D G+++ + YY++SA GGG++ G CP V Q G
Sbjct: 8 AADPPPVHDTDGHELRADANYYVLSA--NRAHGGGLTMAPGHGRHCPLFVSQDPNGQHDG 65
Query: 84 KNLGLLPYD---NSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGE 140
+ + PY + I+R ST++++ F ++ C + + W +D++ A+ G++ + G
Sbjct: 66 FPVRITPYGVAPSDKIIRLSTDVRISFRAYTT---CLQSTEWHIDSELAA-GRRHVITGP 121
Query: 141 GKTC-----QNFFKLEKVS-ASIFDMKI 162
K +N F++EK S A + + K+
Sbjct: 122 VKDPSPSGRENAFRIEKYSGAEVHEYKL 149
>pdb|3QYD|A Chain A, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
pdb|3QYD|C Chain C, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
pdb|3QYD|B Chain B, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
Length = 181
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 30/206 (14%)
Query: 23 GASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKR 82
G+ + ++D GN V++ YYL+ +W GGGI K N CP V++ + +
Sbjct: 1 GSHMDDDLVDAEGNLVENGGTYYLLPHIWA--HGGGIETAKTGNEPCPLTVVRSPNEVSK 58
Query: 83 GKNLGLLPYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK 142
G+ + + S + + ++L F+ S C W V + S + + + K
Sbjct: 59 GEPIRISSRLRSAFIPRGSLVRLGFANPPS---CAASPWWTVVD---SPQGPAVKLSQQK 112
Query: 143 TCQN---FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKD-VGVS-NVDG 197
+ FK EKVS S + YK+++C + D C +G+ + +G
Sbjct: 113 LPEKDIYVFKFEKVSHSNIHV---------YKLLYCQ---HDEEDVKCDQYIGIHRDRNG 160
Query: 198 VQRLVVVDDNDQPNLPLPVVLFPADS 223
+RLVV ++N PL +VL A S
Sbjct: 161 NRRLVVTEEN-----PLELVLLKAKS 181
>pdb|3I2X|A Chain A, Crystal Structure Of A Chimeric Trypsin Inhibitor Having
Rea Loop Of Eti On The Scaffold Of Wci
pdb|3I2X|B Chain B, Crystal Structure Of A Chimeric Trypsin Inhibitor Having
Rea Loop Of Eti On The Scaffold Of Wci
Length = 187
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 30/206 (14%)
Query: 23 GASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKR 82
G+ + ++D GN V++ YYL+ +W GGGI K N CP V++ + +
Sbjct: 1 GSHMDDDLVDAEGNLVENGGTYYLLPHIWA--HGGGIETAKTGNEPCPLTVVRSPNEVSK 58
Query: 83 GKNLGLLPYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK 142
G+ + + S + + + L F+ S C W V + S + + + K
Sbjct: 59 GEPIRISSRLRSAFIPRGSLVALGFANPPS---CAASPWWTVVD---SPQGPAVKLSQQK 112
Query: 143 TCQN---FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKD-VGVS-NVDG 197
+ FK EKVS S + YK+++C + D C +G+ + +G
Sbjct: 113 LPEKDILVFKFEKVSHSNIHV---------YKLLYCQ---HDEEDVKCDQYIGIHRDRNG 160
Query: 198 VQRLVVVDDNDQPNLPLPVVLFPADS 223
+RLVV ++N PL +VL A S
Sbjct: 161 NRRLVVTEEN-----PLELVLLKAKS 181
>pdb|3I29|B Chain B, Crystal Structure Of A Binary Complex Between An Mutant
Tryp Inhibitor With Bovine Trypsin
Length = 187
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 30/206 (14%)
Query: 23 GASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKR 82
G+ + ++D GN V++ YYL+ +W GGGI K N CP V++ + +
Sbjct: 1 GSHMDDDLVDAEGNLVENGGTYYLLPHIWA--HGGGIETAKTGNEPCPLTVVRSPNEVSK 58
Query: 83 GKNLGLLPYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK 142
G+ + + S + + + L F+ S C W V + S + + + K
Sbjct: 59 GEPIRISSQYRSLFIPRGSLVALGFANPPS---CAASPWWTVVD---SPQGPAVKLSQQK 112
Query: 143 TCQN---FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKD-VGVS-NVDG 197
+ FK EKVS S + YK+++C + D C +G+ + +G
Sbjct: 113 LPEKDILVFKFEKVSHSNIHV---------YKLLYCQ---HDEEDVKCDQYIGIHRDRNG 160
Query: 198 VQRLVVVDDNDQPNLPLPVVLFPADS 223
+RLVV ++N PL +VL A S
Sbjct: 161 NRRLVVTEEN-----PLELVLLKAKS 181
>pdb|1XG6|A Chain A, The Crystal Structure Of The P1 Mutant (Leu To Arg)of A
Winged Bean Chymotrypsin Inhibitor(Kunitz)solved At
2.15a Resolution
Length = 187
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 30/206 (14%)
Query: 23 GASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKR 82
G+ + ++D GN V++ YYL+ +W GGGI K N CP V++ + +
Sbjct: 1 GSHMDDDLVDAEGNLVENGGTYYLLPHIWA--HGGGIETAKTGNEPCPLTVVRSPNEVSK 58
Query: 83 GKNLGLLPYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK 142
G+ + + S + + + L F+ S C W V + S + + + K
Sbjct: 59 GEPIRISSQFRSLFIPRGSLVALGFANPPS---CAASPWWTVVD---SPQGPAVKLSQQK 112
Query: 143 TCQN---FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKD-VGVS-NVDG 197
+ FK EKVS S + YK+++C + D C +G+ + +G
Sbjct: 113 LPEKDILVFKFEKVSHSNIHV---------YKLLYCQ---HDEEDVKCDQYIGIHRDRNG 160
Query: 198 VQRLVVVDDNDQPNLPLPVVLFPADS 223
+RLVV ++N PL +VL A S
Sbjct: 161 NRRLVVTEEN-----PLELVLLKAKS 181
>pdb|2QYI|B Chain B, Crystal Structure Of A Binary Complex Between An
Engineered Trypsin Inhibitor And Bovine Trypsin
pdb|2QYI|D Chain D, Crystal Structure Of A Binary Complex Between An
Engineered Trypsin Inhibitor And Bovine Trypsin
pdb|3VEQ|A Chain A, A Binary Complex Betwwen Bovine Pancreatic Trypsin And A
Engineered Mutant Trypsin Inhibitor
Length = 183
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 30/199 (15%)
Query: 30 ILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLL 89
++D GN V++ YYL+ +W GGGI K N CP V++ + +G+ + +
Sbjct: 4 LVDAEGNLVENGGTYYLLPHIWA--HGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRIS 61
Query: 90 PYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGKTCQN--- 146
S + + + L F+ S C W V + S + + + K +
Sbjct: 62 SQFRSLFIPRGSLVALGFANPPS---CAASPWWTVVD---SPQGPAVKLSQQKLPEKDIL 115
Query: 147 FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKD-VGVS-NVDGVQRLVVV 204
FK EKVS S + YK+++C + D C +G+ + +G +RLVV
Sbjct: 116 VFKFEKVSHSNIHV---------YKLLYCQ---HDEEDVKCDQYIGIHRDRNGNRRLVVT 163
Query: 205 DDNDQPNLPLPVVLFPADS 223
++N PL +VL A S
Sbjct: 164 EEN-----PLELVLLKAKS 177
>pdb|3I2A|A Chain A, Crystal Structure Of A Chimeric Trypsin Inhibitor Protein
St Wci(S)
pdb|3I2A|B Chain B, Crystal Structure Of A Chimeric Trypsin Inhibitor Protein
St Wci(S)
Length = 187
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 32/207 (15%)
Query: 23 GASESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKR 82
G+ + ++D GN V++ YYL+ +W GGGI K N CP V++ + +
Sbjct: 1 GSHMDDDLVDAEGNLVENGGTYYLLPHIWA--HGGGIETAKTGNEPCPLTVVRSPNEVSK 58
Query: 83 GKNLGL-LPYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEG 141
G+ + + PY I R S + L F+ S C W V + S + + +
Sbjct: 59 GEPIRISSPYRIRFIPRGSL-VALGFANPPS---CAASPWWTVVD---SPQGPAVKLSQQ 111
Query: 142 KTCQN---FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKD-VGVS-NVD 196
K + FK EKVS S +YK+++C + D C +G+ + +
Sbjct: 112 KLPEKDILVFKFEKVSHSNIH---------VYKLLYCQ---HDEEDVKCDQYIGIHRDRN 159
Query: 197 GVQRLVVVDDNDQPNLPLPVVLFPADS 223
G +RLVV ++N PL +VL A S
Sbjct: 160 GNRRLVVTEEN-----PLELVLLKAKS 181
>pdb|2BEB|A Chain A, X-Ray Structure Of Asn To Thr Mutant Of Winged Bean
Chymotrypsin Inhibitor
pdb|2BEB|B Chain B, X-Ray Structure Of Asn To Thr Mutant Of Winged Bean
Chymotrypsin Inhibitor
Length = 186
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 30/199 (15%)
Query: 30 ILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLL 89
++D GN V++ YYL+ +W GGGI K N CP V++ + +G+ + +
Sbjct: 7 LVDAEGNLVETGGTYYLLPHIWA--HGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRIS 64
Query: 90 PYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGKTCQN--- 146
S + + + L F+ S C W V + S + + + K +
Sbjct: 65 SQFLSLFIPRGSLVALGFANPPS---CAASPWWTVVD---SPQGPAVKLSQQKLPEKDIL 118
Query: 147 FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLC-KDVGVS-NVDGVQRLVVV 204
FK EKVS S + YK+++C + D C + +G+ + +G +RLVV
Sbjct: 119 VFKFEKVSHSNIHV---------YKLLYCQ---HDEEDVKCDQYIGIHRDRNGNRRLVVT 166
Query: 205 DDNDQPNLPLPVVLFPADS 223
++N PL +VL A S
Sbjct: 167 EEN-----PLELVLLKAKS 180
>pdb|2ET2|A Chain A, Crystal Structure Of An Asn To Ala Mutant Of Winged Bean
Chymotrypsin Inhibitor Protein
Length = 186
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 30/199 (15%)
Query: 30 ILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLL 89
++D GN V++ YYL+ +W GGGI K N CP V++ + +G+ + +
Sbjct: 7 LVDAEGNLVEAGGTYYLLPHIWA--HGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRIS 64
Query: 90 PYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGKTCQN--- 146
S + + + L F+ S C W V + S + + + K +
Sbjct: 65 SQFLSLFIPRGSLVALGFANPPS---CAASPWWTVVD---SPQGPAVKLSQQKLPEKDIL 118
Query: 147 FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLC-KDVGVS-NVDGVQRLVVV 204
FK EKVS S + YK+++C + D C + +G+ + +G +RLVV
Sbjct: 119 VFKFEKVSHSNIHV---------YKLLYCQ---HDEEDVKCDQYIGIHRDRNGNRRLVVT 166
Query: 205 DDNDQPNLPLPVVLFPADS 223
++N PL +VL A S
Sbjct: 167 EEN-----PLELVLLKAKS 180
>pdb|1EYL|A Chain A, Structure Of A Recombinant Winged Bean Chymotrypsin
Inhibitor
Length = 186
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 30/199 (15%)
Query: 30 ILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLL 89
++D GN V++ YYL+ +W GGGI K N CP V++ + +G+ + +
Sbjct: 7 LVDAEGNLVENGGTYYLLPHIWA--HGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRIS 64
Query: 90 PYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGKTCQN--- 146
S + + + L F+ S C W V + S + + + K +
Sbjct: 65 SQFLSLFIPRGSLVALGFANPPS---CAASPWWTVVD---SPQGPAVKLSQQKLPEKDIL 118
Query: 147 FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKD-VGVS-NVDGVQRLVVV 204
FK EKVS S + YK+++C + D C +G+ + +G +RLVV
Sbjct: 119 VFKFEKVSHSNIHV---------YKLLYCQ---HDEEDVKCDQYIGIHRDRNGNRRLVVT 166
Query: 205 DDNDQPNLPLPVVLFPADS 223
++N PL +VL A S
Sbjct: 167 EEN-----PLELVLLKAKS 180
>pdb|4WBC|A Chain A, 2.13 A Structure Of A Kunitz-Type Winged Bean Chymotrypsin
Inhibitor Protein
pdb|1WBC|A Chain A, Crystallization And Preliminary X-Ray Studies Of
Psophocarpin B1, A Chymotrypsin Inhibitor From Winged
Bean Seeds
pdb|2WBC|A Chain A, Refined Crystal Structure (2.3 Angstrom) Of A Winged Bean
Chymotrypsin Inhibitor And Location Of Its Second
Reactive Site
Length = 183
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 30/199 (15%)
Query: 30 ILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLL 89
++D GN V++ YYL+ +W GGGI K N CP V++ + +G+ + +
Sbjct: 4 LVDAEGNLVENGGTYYLLPHIWA--HGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRIS 61
Query: 90 PYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGKTCQN--- 146
S + + + L F+ S C W V + S + + + K +
Sbjct: 62 SQFLSLFIPRGSLVALGFANPPS---CAASPWWTVVD---SPQGPAVKLSQQKLPEKDIL 115
Query: 147 FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKD-VGVS-NVDGVQRLVVV 204
FK EKVS S + YK+++C + D C +G+ + +G +RLVV
Sbjct: 116 VFKFEKVSHSNIHV---------YKLLYCQ---HDEEDVKCDQYIGIHRDRNGNRRLVVT 163
Query: 205 DDNDQPNLPLPVVLFPADS 223
++N PL +VL A S
Sbjct: 164 EEN-----PLELVLLKAKS 177
>pdb|2ESU|A Chain A, Crystal Structure Of Asn To Gln Mutant Of Winged Bean
Chymotrypsin Inhibitor Protein
Length = 186
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 30/199 (15%)
Query: 30 ILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLL 89
++D GN V+ YYL+ +W GGGI K N CP V++ + +G+ + +
Sbjct: 7 LVDAEGNLVEQGGTYYLLPHIWA--HGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRIS 64
Query: 90 PYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGKTCQN--- 146
S + + + L F+ S C W V + S + + + K +
Sbjct: 65 SQFLSLFIPRGSLVALGFANPPS---CAASPWWTVVD---SPQGPAVKLSQQKLPEKDIL 118
Query: 147 FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKD-VGVS-NVDGVQRLVVV 204
FK EKVS S + YK+++C + D C +G+ + +G +RLVV
Sbjct: 119 VFKFEKVSHSNIHV---------YKLLYCQ---HDEEDVKCDQYIGIHRDRNGNRRLVVT 166
Query: 205 DDNDQPNLPLPVVLFPADS 223
++N PL +VL A S
Sbjct: 167 EEN-----PLELVLLKAKS 180
>pdb|1FMZ|A Chain A, Crystal Structure Of A Mutant Winged Bean Chymotrypsin
Inhibitor Protein, N14k
Length = 186
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 30/199 (15%)
Query: 30 ILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLL 89
++D GN V+ YYL+ +W GGGI K N CP V++ + +G+ + +
Sbjct: 7 LVDAEGNLVEKGGTYYLLPHIWA--HGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRIS 64
Query: 90 PYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGKTCQN--- 146
S + + + L F+ S C W V + S + + + K +
Sbjct: 65 SQFLSLFIPRGSLVALGFANPPS---CAASPWWTVVD---SPQGPAVKLSQQKLPEKDIL 118
Query: 147 FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLC-KDVGVS-NVDGVQRLVVV 204
FK EKVS S + YK+++C + D C + +G+ + +G +RLVV
Sbjct: 119 VFKFEKVSHSNIHV---------YKLLYCQ---HDEEDVKCDQYIGIHRDRNGNRRLVVT 166
Query: 205 DDNDQPNLPLPVVLFPADS 223
++N PL +VL A S
Sbjct: 167 EEN-----PLELVLLKAKS 180
>pdb|2BEA|A Chain A, Crystal Structure Of Asn14 To Gly Mutant Of Wci
pdb|2BEA|B Chain B, Crystal Structure Of Asn14 To Gly Mutant Of Wci
Length = 186
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 30/199 (15%)
Query: 30 ILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLL 89
++D GN V+ YYL+ +W GGGI K N CP V++ + +G+ + +
Sbjct: 7 LVDAEGNLVEGGGTYYLLPHIWA--HGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRIS 64
Query: 90 PYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGKTCQN--- 146
S + + + L F+ S C W V + S + + + K +
Sbjct: 65 SQFLSLFIPRGSLVALGFANPPS---CAASPWWTVVD---SPQGPAVKLSQQKLPEKDIL 118
Query: 147 FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLC-KDVGVS-NVDGVQRLVVV 204
FK EKVS S + YK+++C + D C + +G+ + +G +RLVV
Sbjct: 119 VFKFEKVSHSNIHV---------YKLLYCQ---HDEEDVKCDQYIGIHRDRNGNRRLVVT 166
Query: 205 DDNDQPNLPLPVVLFPADS 223
++N PL +VL A S
Sbjct: 167 EEN-----PLELVLLKAKS 180
>pdb|1FN0|A Chain A, Structure Of A Mutant Winged Bean Chymotrypsin Inhibitor
Protein, N14d
Length = 186
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 30/199 (15%)
Query: 30 ILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLL 89
++D GN V+ YYL+ +W GGGI K N CP V++ + +G+ + +
Sbjct: 7 LVDAEGNLVEDGGTYYLLPHIWA--HGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRIS 64
Query: 90 PYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGKTCQN--- 146
S + + + L F+ S C W V + S + + + K +
Sbjct: 65 SQFLSLFIPRGSLVALGFANPPS---CAASPWWTVVD---SPQGPAVKLSQQKLPEKDIL 118
Query: 147 FFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKD-VGVS-NVDGVQRLVVV 204
FK EKVS S + YK+++C + D C +G+ + +G +RLVV
Sbjct: 119 VFKFEKVSHSNIHV---------YKLLYCQ---HDEEDVKCDQYIGIHRDRNGNRRLVVT 166
Query: 205 DDNDQPNLPLPVVLFPADS 223
++N PL +VL A S
Sbjct: 167 EEN-----PLELVLLKAKS 180
>pdb|1TIE|A Chain A, Crystal Structure Of A Kunitz-Type Trypsin Inhibitor From
Erythrina Caffra Seeds
Length = 172
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 26/190 (13%)
Query: 30 ILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLGLL 89
+LD G V + YYL+ +W GGG+ K CP V+Q + GK + +
Sbjct: 2 LLDGNGEVVQNGGTYYLLPQVWA--QGGGVQLAKTGEETCPLTVVQSPNELSDGKPIRIE 59
Query: 90 PYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGKTCQNFFK 149
S + + +++ F+ +C W V D ++ E FK
Sbjct: 60 SRLRSAFIPDDDKVRIGFAYAP---KCAPSPWWTVVEDEQEGLSVKLSEDESTQFDYPFK 116
Query: 150 LEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDTLCKDVGVS-NVDGVQRLVVVDDND 208
E+VS + YK+++C G + C +G++ + G +RLVV +D
Sbjct: 117 FEQVSDQLHS----------YKLLYC----EGKHEK-CASIGINRDQKGYRRLVVTED-- 159
Query: 209 QPNLPLPVVL 218
PL VVL
Sbjct: 160 ---YPLTVVL 166
>pdb|1R8N|A Chain A, The Crystal Structure Of The Kunitz (Sti) Type Inhibitor
From Seeds Of Delonix Regia
Length = 185
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 58/219 (26%)
Query: 25 SESEPILDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGKNGQCPTDVIQL-------- 76
S++E + D+ G V YY+VSA+ G GG + CP +IQ
Sbjct: 1 SDAEKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGS-MCPMSIIQEQSDLQMGL 59
Query: 77 -----SPKDKRGKNLGLLPYDNSTIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASL 131
SP++K+GK + T ++++F C + S W + D+
Sbjct: 60 PVRFSSPEEKQGK------------IYTDTELEIEFVEKP---DCAESSKWVIVKDS--- 101
Query: 132 GKQFITIG------EGKTCQNFFKLEKVSASIFDMKIALDIPCLYKIVHCSTLVNGSCDT 185
G+ + IG +G+ + FFK+EK+ + YK+V C +GS
Sbjct: 102 GEARVAIGGSEDHPQGELVRGFFKIEKLGS------------LAYKLVFCPKSDSGS--- 146
Query: 186 LCKDVGVSNVDGVQRLVVVDDNDQPNLPLPVVLFPADSG 224
C D+G+ N +G + LV+ +D +P VV SG
Sbjct: 147 -CSDIGI-NYEGRRSLVLKSSDD---VPFRVVFVKPRSG 180
>pdb|2DRE|A Chain A, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|B Chain B, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|C Chain C, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|D Chain D, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
Length = 180
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 25 SESEPILDVYGNQVDSSHRYYLVSALWGVKTGGG-ISADKGKNGQCPTDVIQLSPKDKRG 83
++ EP+ D GN + RY++ A GGG + A+ + CP +++ S + G
Sbjct: 2 NDEEPVKDTNGNPLKIETRYFIQPA--SDNNGGGLVPANVDLSHLCPLGIVRTSLPYQPG 59
Query: 84 KNLGLLPYDNSTI-------VRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFI 136
LP ST V +TNI + F + + C W VD+ +S K I
Sbjct: 60 -----LPVTISTPSSSEGNDVLTNTNIAITFD--APIWLCPSSKTWTVDS--SSEEKYII 110
Query: 137 TIGEGKTCQNFFKLEK 152
T G+ K+ ++FF++EK
Sbjct: 111 TGGDPKSGESFFRIEK 126
>pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|3ABG|B Chain B, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|2XLL|A Chain A, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|B Chain B, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|C Chain C, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|D Chain D, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
Length = 534
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 179 VNGSCDTLCKDVGVSNVDGVQRLVVVDDNDQPNLPLPVVLFPADSGRSMLFPS 231
+ GS + D N D V R VV DD QP+ + PA+ R + FPS
Sbjct: 296 LGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPD----TSVVPANL-RDVPFPS 343
>pdb|1JR2|A Chain A, Structure Of Uroporphyrinogen Iii Synthase
pdb|1JR2|B Chain B, Structure Of Uroporphyrinogen Iii Synthase
Length = 286
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 114 QQCNKDSLWKVDNDNASLGKQFITIGEGKTCQNFFKLEKVSASIFDMKIALDIPC 168
++ N S++ V N ASL + EG+TC N KL + S + L PC
Sbjct: 110 EKWNAKSVYVVGNATASLVSKIGLDTEGETCGNAEKLAEYICSRESSALPLLFPC 164
>pdb|2EJW|A Chain A, Homoserine Dehydrogenase From Thermus Thermophilus Hb8
pdb|2EJW|B Chain B, Homoserine Dehydrogenase From Thermus Thermophilus Hb8
pdb|2EJW|E Chain E, Homoserine Dehydrogenase From Thermus Thermophilus Hb8
pdb|2EJW|F Chain F, Homoserine Dehydrogenase From Thermus Thermophilus Hb8
Length = 332
Score = 27.3 bits (59), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 15 ALATKPQLGASESEPILDVYGNQVDSSHRYYLVSAL 50
AL +LG +E++P LDV G +D++H+ L++ L
Sbjct: 169 ALLEAQRLGYAEADPTLDVEG--IDAAHKLTLLARL 202
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,812,907
Number of Sequences: 62578
Number of extensions: 281118
Number of successful extensions: 625
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 594
Number of HSP's gapped (non-prelim): 34
length of query: 232
length of database: 14,973,337
effective HSP length: 96
effective length of query: 136
effective length of database: 8,965,849
effective search space: 1219355464
effective search space used: 1219355464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)