BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026835
(232 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118488288|gb|ABK95963.1| unknown [Populus trichocarpa]
Length = 232
Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/232 (92%), Positives = 221/232 (95%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELPVA 232
VLGIKVKIML+WD KGK GP TPLPDLVTIHP KEE YV P T+IE+PVA
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEEEYVPPVMTTNIEIPVA 232
>gi|359476269|ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [Vitis vinifera]
gi|296081703|emb|CBI20708.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/231 (92%), Positives = 222/231 (96%), Gaps = 1/231 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGKRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATSIELP 230
VLGIKVKIML+WD KGKQGPTTPLPDLVTIH P +EE YV P T+IE+P
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEEYVPPVLTTNIEVP 231
>gi|224135747|ref|XP_002322150.1| predicted protein [Populus trichocarpa]
gi|222869146|gb|EEF06277.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/233 (92%), Positives = 221/233 (94%), Gaps = 1/233 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLK-EEVYVAPATATSIELPVA 232
VLGIKVKIML+WD KGK GP TPLPDLVTIHP K EE YV P T+IE+PVA
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEEEEYVPPLLTTNIEIPVA 233
>gi|225444782|ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
gi|297738588|emb|CBI27833.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/234 (91%), Positives = 222/234 (94%), Gaps = 2/234 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCA+AQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPAT-ATSIELPVA 232
VLGIKVKIML+WD KGKQGP TPLPDLVTIH P +EE Y+ P AT IE+P A
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYIRPEKLATDIEVPTA 234
>gi|255546003|ref|XP_002514061.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223546517|gb|EEF48015.1| 40S ribosomal protein S3, putative [Ricinus communis]
Length = 233
Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/233 (92%), Positives = 221/233 (94%), Gaps = 1/233 (0%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MAT QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVL
Sbjct: 1 MATAQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GEKGRRIRELTSVVQKRFKFPENSVELYAEKVN+RGLCAIAQAESLRYKLLGGLAVRRAC
Sbjct: 61 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 180
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELPVA 232
GVLGIKVKIML+WD KGKQGPTTPLPDLVTIH KEE P AT +E+PVA
Sbjct: 181 GVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHSPKEEELRPPVLATEVEVPVA 233
>gi|356559951|ref|XP_003548259.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 236
Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/235 (91%), Positives = 223/235 (94%), Gaps = 3/235 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPAT--ATSIELPVA 232
VLGIKVKIML+WD KGKQGP TPLPDLVTIH P +EE Y PA AT+IE+PVA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATNIEVPVA 235
>gi|224088766|ref|XP_002308530.1| predicted protein [Populus trichocarpa]
gi|118483836|gb|ABK93809.1| unknown [Populus trichocarpa]
gi|118485378|gb|ABK94546.1| unknown [Populus trichocarpa]
gi|222854506|gb|EEE92053.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/234 (91%), Positives = 222/234 (94%), Gaps = 2/234 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLK-EEVYVAPAT-ATSIELPVA 232
VLGIKVKIML+WD KGK GP TPLPDLVTIHP K EE YVAP T+IE+PVA
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEEEEYVAPPVMTTNIEIPVA 234
>gi|356534894|ref|XP_003535986.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 236
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/236 (90%), Positives = 222/236 (94%), Gaps = 4/236 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPA---TATSIELPVA 232
VLGIKVKIML+WD KGKQGP TPLPDLVTIH P +EE Y+ PA A IE+PVA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHSPKEEEEYIQPAPVLAANDIEVPVA 236
>gi|356559953|ref|XP_003548260.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 235
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/235 (91%), Positives = 222/235 (94%), Gaps = 3/235 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA+Q+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPAT--ATSIELPVA 232
VLGIKVKIML+WD KGKQGP TPLPDLVTIH P +EE Y PA AT IE+PVA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATDIEVPVA 235
>gi|224141685|ref|XP_002324195.1| predicted protein [Populus trichocarpa]
gi|118483222|gb|ABK93514.1| unknown [Populus trichocarpa]
gi|118487214|gb|ABK95435.1| unknown [Populus trichocarpa]
gi|222865629|gb|EEF02760.1| predicted protein [Populus trichocarpa]
Length = 234
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/233 (92%), Positives = 221/233 (94%), Gaps = 2/233 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE-EVYVAPATATS-IELPV 231
VLGIKVKIML+WD KGK GP TPLPDLVTIHP KE E YVAP T+ IE+PV
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEDEEYVAPPVMTANIEIPV 233
>gi|351726176|ref|NP_001235326.1| uncharacterized protein LOC100499737 [Glycine max]
gi|255626187|gb|ACU13438.1| unknown [Glycine max]
Length = 236
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/236 (90%), Positives = 222/236 (94%), Gaps = 4/236 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC+
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACH 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPA---TATSIELPVA 232
VLGIKVKIML+WD KGKQGP TPLPDLVTIH P +EE Y+ PA A IE+PVA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHSPKEEEEYIQPAPVLAANDIEVPVA 236
>gi|388495648|gb|AFK35890.1| unknown [Lotus japonicus]
Length = 235
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/235 (89%), Positives = 223/235 (94%), Gaps = 3/235 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPV+TEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVKTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVV KRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVSKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPA--TATSIELPVA 232
VLGIKVKIML+WD KGKQGP TPLPD+VTIH P +E+ Y+ PA +A+ IE+PVA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHSPKEEDEYIQPAAVSASDIEVPVA 235
>gi|388494596|gb|AFK35364.1| unknown [Lotus japonicus]
gi|388504726|gb|AFK40429.1| unknown [Lotus japonicus]
Length = 237
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/235 (89%), Positives = 223/235 (94%), Gaps = 3/235 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP++TEIIIRATRTQ VLG
Sbjct: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMKTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPA--TATSIELPVA 232
VLGIKVKIML+WD KGKQGP TPLPD+VTIH P +E+ Y+ PA +A +E+PVA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEDEYIRPAAVSAEEVEVPVA 235
>gi|358348478|ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355504208|gb|AES85411.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 239
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/234 (90%), Positives = 221/234 (94%), Gaps = 3/234 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPAT--ATSIELPV 231
VLGIKVKIML+WD KGKQGP TPLPD+VTIH P +EE Y+ PA A IE+PV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPV 234
>gi|255637340|gb|ACU19000.1| unknown [Glycine max]
Length = 236
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/235 (90%), Positives = 221/235 (94%), Gaps = 3/235 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMI SGQPV +YID AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMIFSGQPVKDYIDFAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPAT--ATSIELPVA 232
VLGIKVKIML+WD KGKQGP TPLPDLVTIH P +EE Y PA AT+IE+PVA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATNIEVPVA 235
>gi|255550145|ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223544609|gb|EEF46125.1| 40S ribosomal protein S3, putative [Ricinus communis]
Length = 234
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/234 (90%), Positives = 221/234 (94%), Gaps = 2/234 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MSTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FP+NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATS-IELPVA 232
VLGIKVKIML+WD +GK GP TPLPDLVTIH P +EE Y PA T+ IE+PVA
Sbjct: 181 VLGIKVKIMLDWDPRGKLGPMTPLPDLVTIHSPKEEEEYNTPAVLTANIEIPVA 234
>gi|357438107|ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355478377|gb|AES59580.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 239
Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/234 (90%), Positives = 221/234 (94%), Gaps = 3/234 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYK+LGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKVLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPAT--ATSIELPV 231
VLGIKVKIML+WD KGKQGP TPLPD+VTIH P +EE Y+ PA A IE+PV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPV 234
>gi|225442156|ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
gi|297743020|emb|CBI35887.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/234 (90%), Positives = 220/234 (94%), Gaps = 2/234 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN+VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYV-APATATSIELPVA 232
VLGIKVKIML+WD KGKQGP TPLPDLVTIH P +EE Y+ P A IE+ A
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYLRPPIPAADIEVAAA 234
>gi|356534900|ref|XP_003535989.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 239
Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/236 (89%), Positives = 220/236 (93%), Gaps = 5/236 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATA----TSIELPV 231
VLGIKVKIML+WD KGKQGP TPLPDLVTIH P +EE Y+ PA IE+PV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHSPKEEEEYIRPAPVLAANNDIEVPV 236
>gi|449446618|ref|XP_004141068.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
gi|449488075|ref|XP_004157933.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
Length = 243
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/229 (91%), Positives = 218/229 (95%), Gaps = 3/229 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE---VYVAPATATS 226
VLGIKVKIML+WD KGKQGPTTPLPD+VTIH KEE V+ PA T+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTA 229
>gi|217071088|gb|ACJ83904.1| unknown [Medicago truncatula]
gi|388507820|gb|AFK41976.1| unknown [Medicago truncatula]
Length = 239
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/234 (90%), Positives = 220/234 (94%), Gaps = 3/234 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR CY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVCY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPAT--ATSIELPV 231
VLGIKVKIML+WD KGKQGP TPLPD+VTIH P +EE Y+ PA A IE+PV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPV 234
>gi|449447888|ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
gi|449521735|ref|XP_004167885.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
Length = 236
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/236 (89%), Positives = 220/236 (93%), Gaps = 4/236 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPAT---ATSIELPVA 232
VLGIKVKIML+WD KGKQGP TPLPDLVTIH P +EE ++ P T IE+ A
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHSPKEEEDFIRPVAVIPTTEIEVGAA 236
>gi|357439691|ref|XP_003590123.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|217071466|gb|ACJ84093.1| unknown [Medicago truncatula]
gi|355479171|gb|AES60374.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|388518095|gb|AFK47109.1| unknown [Medicago truncatula]
Length = 239
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/230 (90%), Positives = 218/230 (94%), Gaps = 1/230 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATSIEL 229
VLGIKVKIML+WD KGKQGP TPLPD+VTIH P +EE Y+ PA + ++
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDI 230
>gi|192910782|gb|ACF06499.1| ribosomal protein [Elaeis guineensis]
Length = 235
Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/235 (88%), Positives = 218/235 (92%), Gaps = 3/235 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMIS GQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISCGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAP--ATATSIELPVA 232
VLGIKVKIML+WD KGKQGP TPLPDL +IH P EE Y+ P A +E+PVA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPATPLPDLASIHTPKDEEEYMRPPLTMAPELEVPVA 235
>gi|358248410|ref|NP_001239621.1| uncharacterized protein LOC100808705 [Glycine max]
gi|255641130|gb|ACU20843.1| unknown [Glycine max]
Length = 236
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/236 (90%), Positives = 220/236 (93%), Gaps = 4/236 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPAT--ATSIE-LPVA 232
VLGIKVKIML+WD KGKQGP TPLPDLVTIH P +EE Y P A IE +PVA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYNRPPAVLANDIEVVPVA 236
>gi|116786147|gb|ABK23996.1| unknown [Picea sitchensis]
gi|116793880|gb|ABK26916.1| unknown [Picea sitchensis]
Length = 233
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/216 (94%), Positives = 210/216 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKK+KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKKKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDKAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGIKVKIML+WD KGKQGPTTPLPDLVTIH KEE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEE 216
>gi|255638159|gb|ACU19393.1| unknown [Glycine max]
Length = 236
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/236 (89%), Positives = 219/236 (92%), Gaps = 4/236 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR CY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVCY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPAT--ATSIE-LPVA 232
VLGIKVKIML+WD KGKQGP TPLPDLVTIH P +EE Y P A IE +PVA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYNRPPAVLANDIEVVPVA 236
>gi|357144865|ref|XP_003573440.1| PREDICTED: 40S ribosomal protein S3-3-like [Brachypodium
distachyon]
Length = 227
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/227 (89%), Positives = 214/227 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSI 227
VLGIKVKIML+WD KGK GPTTPLPDLVTIHP KEE + P T +
Sbjct: 181 VLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEEDELRPPTLVEV 227
>gi|115473289|ref|NP_001060243.1| Os07g0608500 [Oryza sativa Japonica Group]
gi|14192875|gb|AAK55780.1|AC079038_14 Putative 40S ribosomal protein; contains C-terminal domain [Oryza
sativa]
gi|34394183|dbj|BAC84635.1| putative 40S ribosomal protein [Oryza sativa Japonica Group]
gi|50509862|dbj|BAD32034.1| putative 40S ribosomal protein [Oryza sativa Japonica Group]
gi|113611779|dbj|BAF22157.1| Os07g0608500 [Oryza sativa Japonica Group]
gi|125559132|gb|EAZ04668.1| hypothetical protein OsI_26820 [Oryza sativa Indica Group]
gi|125601033|gb|EAZ40609.1| hypothetical protein OsJ_25071 [Oryza sativa Japonica Group]
gi|215694983|dbj|BAG90174.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 233
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/231 (90%), Positives = 215/231 (93%), Gaps = 4/231 (1%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
TQISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEK
Sbjct: 5 TQISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF FPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV
Sbjct: 65 GRRIRELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YIDSAVRHVLLRQGVL
Sbjct: 125 LRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVL 184
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATSIELPVA 232
GIKVKIML+WD KGKQGP TPLPDLVTIH P E+ + P TA E+PVA
Sbjct: 185 GIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDEDEFSKPLTA---EIPVA 232
>gi|82623397|gb|ABB87113.1| unknown [Solanum tuberosum]
Length = 238
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/217 (94%), Positives = 210/217 (96%), Gaps = 1/217 (0%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MAT QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVL
Sbjct: 1 MATPQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GEKGRRIRELTSVVQKRF F ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC
Sbjct: 61 GEKGRRIRELTSVVQKRFNFKENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV EYID+AVRHVLLRQ
Sbjct: 121 YGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQ 180
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
GVLGIKVKIML+WD KGKQGP TPLPDLVTIHP KEE
Sbjct: 181 GVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHPPKEE 217
>gi|326493582|dbj|BAJ85252.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510059|dbj|BAJ87246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/221 (91%), Positives = 212/221 (95%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAP 221
VLGIKVKIML+WD KGK GPTTPLPDLVTIHP KEE + P
Sbjct: 181 VLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEEDELRP 221
>gi|357498229|ref|XP_003619403.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|357498233|ref|XP_003619405.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355494418|gb|AES75621.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355494420|gb|AES75623.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 235
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/234 (87%), Positives = 217/234 (92%), Gaps = 2/234 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGY+GVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYAGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFK YMISSGQPV +Y+DSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKQNYMISSGQPVKDYVDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATS-IELPVA 232
VLGIKVKIML+WD KGKQGP TPLPD+VTIH P EE Y PA + + +P+A
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKDEEEYTRPAAVVAPLPVPIA 234
>gi|115453877|ref|NP_001050539.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|38093738|gb|AAR10854.1| putative ribosomal protein [Oryza sativa Japonica Group]
gi|108709465|gb|ABF97260.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
gi|113549010|dbj|BAF12453.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|125544608|gb|EAY90747.1| hypothetical protein OsI_12347 [Oryza sativa Indica Group]
gi|125586911|gb|EAZ27575.1| hypothetical protein OsJ_11524 [Oryza sativa Japonica Group]
gi|215686413|dbj|BAG87698.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708682|dbj|BAG93951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 228
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/221 (91%), Positives = 211/221 (95%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAP 221
VLGIKVKIML+WD KGK GPTTPLPDLVTIH KEE + P
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPTTPLPDLVTIHAPKEEEELRP 221
>gi|15238533|ref|NP_198403.1| 40S ribosomal protein S3-3 [Arabidopsis thaliana]
gi|75170994|sp|Q9FJA6.1|RS33_ARATH RecName: Full=40S ribosomal protein S3-3
gi|9758155|dbj|BAB08712.1| 40S ribosomal protein S3 [Arabidopsis thaliana]
gi|16604318|gb|AAL24165.1| AT5g35530/MOK9_14 [Arabidopsis thaliana]
gi|20466075|gb|AAM19959.1| AT5g35530/MOK9_14 [Arabidopsis thaliana]
gi|332006595|gb|AED93978.1| 40S ribosomal protein S3-3 [Arabidopsis thaliana]
Length = 248
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/223 (89%), Positives = 214/223 (95%), Gaps = 1/223 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPA 222
VLG+KVKIML+WD KGKQGP TPLPD+V IH P +++VY+APA
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPA 223
>gi|168010087|ref|XP_001757736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168036169|ref|XP_001770580.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066635|ref|XP_001785240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663171|gb|EDQ49951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678101|gb|EDQ64563.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691012|gb|EDQ77376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/216 (92%), Positives = 209/216 (96%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF+FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLRA RAKSMKFKDGYMISSG PVN+YIDSAVRHV+LRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGIKVKIML+WD KGKQGP TPLPD+VTIH KEE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPMTPLPDVVTIHMPKEE 216
>gi|116783944|gb|ABK23152.1| unknown [Picea sitchensis]
gi|116792247|gb|ABK26290.1| unknown [Picea sitchensis]
Length = 233
Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/231 (88%), Positives = 214/231 (92%), Gaps = 2/231 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA Q+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MAKQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDRAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVA-PATATSIEL 229
VLGIKVKIML+WD KGKQGPT PLPD VTI+ P EE + + P+ +E+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTKPLPDFVTIYTPKDEEDFSSKPSVGNEVEI 231
>gi|168010855|ref|XP_001758119.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168015431|ref|XP_001760254.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168037634|ref|XP_001771308.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677397|gb|EDQ63868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688634|gb|EDQ75010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690575|gb|EDQ76941.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 230
Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/216 (92%), Positives = 209/216 (96%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF+FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLRA RAKSMKFKDGYMISSG PVN+YIDSAVRHV+LRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGIKVKIML+WD KGKQGP TPLPD+VTIH KEE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPMTPLPDVVTIHMPKEE 216
>gi|313103630|pdb|3IZ6|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|22204124|gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum]
Length = 227
Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/221 (91%), Positives = 211/221 (95%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF F EN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFLENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAP 221
VLGIKVKIML+WD KGK GPTTPLPDLVTIHP KEE + P
Sbjct: 181 VLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEENELRP 221
>gi|413921201|gb|AFW61133.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/221 (91%), Positives = 210/221 (95%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAP 221
VLGIKVKIML+WD KGK GP TPLPDLVTIH KEE + P
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPITPLPDLVTIHTPKEEDELRP 221
>gi|255637525|gb|ACU19089.1| unknown [Glycine max]
Length = 239
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/236 (87%), Positives = 214/236 (90%), Gaps = 5/236 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAK MKFKDGYMI GQPV +YID AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKFMKFKDGYMIFFGQPVKDYIDFAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATA----TSIELPV 231
V GIKVKIML+WD KGKQGP TPLPD VTIH P +EE Y+ PA IE+PV
Sbjct: 181 VFGIKVKIMLDWDPKGKQGPKTPLPDFVTIHFPKEEEEYIRPAPVLGANNDIEVPV 236
>gi|222424342|dbj|BAH20127.1| AT5G35530 [Arabidopsis thaliana]
Length = 248
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/223 (88%), Positives = 213/223 (95%), Gaps = 1/223 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRI ELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIGELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPA 222
VLG+KVKIML+WD KGKQGP TPLPD+V IH P +++VY+APA
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPA 223
>gi|242080689|ref|XP_002445113.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
gi|241941463|gb|EES14608.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
Length = 228
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/221 (90%), Positives = 210/221 (95%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAP 221
VLGIKVKIML+WD KGK GP TPLPDLVTIH K+E + P
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPITPLPDLVTIHTPKDEDELRP 221
>gi|242050848|ref|XP_002463168.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor]
gi|241926545|gb|EER99689.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor]
Length = 232
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/229 (89%), Positives = 213/229 (93%), Gaps = 4/229 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEKGR
Sbjct: 7 ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF FPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR
Sbjct: 67 RIRELTSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YIDSAVRHVLLRQGVLGI
Sbjct: 127 FVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI 186
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATSIELPVA 232
KVKIML+WD KGKQGPT PLPDLVTIH P +E+ ++ P A E+PVA
Sbjct: 187 KVKIMLDWDPKGKQGPTMPLPDLVTIHEPKEEDEFLRPLAA---EIPVA 232
>gi|15225107|ref|NP_180719.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
gi|75206146|sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1
gi|14190419|gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana]
gi|4582468|gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis
thaliana]
gi|15028253|gb|AAK76715.1| putative 40S ribosomal protein; contains C-terminal domain
[Arabidopsis thaliana]
gi|15450571|gb|AAK96463.1| At2g31610/T9H9.13 [Arabidopsis thaliana]
gi|15451084|gb|AAK96813.1| 40S ribosomal protein [Arabidopsis thaliana]
gi|20148377|gb|AAM10079.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis
thaliana]
gi|20258907|gb|AAM14147.1| putative 40S ribosomal protein [Arabidopsis thaliana]
gi|330253473|gb|AEC08567.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
Length = 250
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/227 (88%), Positives = 212/227 (93%), Gaps = 1/227 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE-VYVAPATATS 226
VLGIKVKIML+WD GK GP TPLPD+V IH K++ VY APA A +
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAA 227
>gi|195637410|gb|ACG38173.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/221 (90%), Positives = 210/221 (95%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGA+GCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAEGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAP 221
VLGIKVKIML+WD KGK GP TPLPDLVTIH KEE + P
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPITPLPDLVTIHTPKEEDELRP 221
>gi|297805098|ref|XP_002870433.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297316269|gb|EFH46692.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 248
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/223 (88%), Positives = 213/223 (95%), Gaps = 1/223 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRF+FP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFRFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPA 222
VLG+KVKIML+WD KGK GP TPLPD+V IH P +++VY+APA
Sbjct: 181 VLGLKVKIMLDWDPKGKLGPMTPLPDVVIIHTPKEDDVYIAPA 223
>gi|226495937|ref|NP_001149150.1| LOC100282772 [Zea mays]
gi|195625100|gb|ACG34380.1| 40S ribosomal protein S3 [Zea mays]
gi|223947389|gb|ACN27778.1| unknown [Zea mays]
gi|223972753|gb|ACN30564.1| unknown [Zea mays]
gi|413917290|gb|AFW57222.1| 40S ribosomal protein S3 [Zea mays]
Length = 229
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/216 (92%), Positives = 208/216 (96%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLR++MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG
Sbjct: 121 GVLRYVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGIKVKIML+WD KGK GP TPLPDLVTIH K+E
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPITPLPDLVTIHTPKDE 216
>gi|212723988|ref|NP_001132637.1| hypothetical protein [Zea mays]
gi|194694962|gb|ACF81565.1| unknown [Zea mays]
gi|414887551|tpg|DAA63565.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
gi|414887552|tpg|DAA63566.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
Length = 232
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/221 (90%), Positives = 208/221 (94%), Gaps = 1/221 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEKGR
Sbjct: 7 ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF FPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR
Sbjct: 67 RIRELTSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YIDSAVRHVLLRQGVLGI
Sbjct: 127 FVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI 186
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATA 224
KVKIML+WD KGKQGPT PLPDLVTIH P +E+ ++ P A
Sbjct: 187 KVKIMLDWDPKGKQGPTMPLPDLVTIHVPKEEDEFLRPLAA 227
>gi|302761098|ref|XP_002963971.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii]
gi|302768543|ref|XP_002967691.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii]
gi|302769059|ref|XP_002967949.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii]
gi|300164429|gb|EFJ31038.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii]
gi|300164687|gb|EFJ31296.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii]
gi|300167700|gb|EFJ34304.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii]
Length = 230
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/220 (90%), Positives = 211/220 (95%), Gaps = 1/220 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ+VLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE++VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPESTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVNE+ID AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGSPVNEFIDRAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYV 219
VLGIKVKIML+WD KGK GP+TPLPD+VTI P +EE YV
Sbjct: 181 VLGIKVKIMLDWDPKGKTGPSTPLPDMVTIQVPKEEEEYV 220
>gi|297822907|ref|XP_002879336.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297325175|gb|EFH55595.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 250
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/223 (88%), Positives = 209/223 (93%), Gaps = 1/223 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKF DGYM+SSGQP EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFMDGYMVSSGQPTKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVY-VAPA 222
VLGIKVKIML+WD GK GP TPLPD+V IH K++V +APA
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVNLAPA 223
>gi|297816692|ref|XP_002876229.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297322067|gb|EFH52488.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/219 (89%), Positives = 207/219 (94%), Gaps = 1/219 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVY 218
VLGIKVK+ML+WD KGK GP TPLPD+V IH P +EE Y
Sbjct: 181 VLGIKVKVMLDWDPKGKLGPMTPLPDVVIIHSPKEEETY 219
>gi|15232352|ref|NP_190955.1| 40S ribosomal protein S3-2 [Arabidopsis thaliana]
gi|75183568|sp|Q9M339.1|RS32_ARATH RecName: Full=40S ribosomal protein S3-2
gi|16226458|gb|AAL16173.1|AF428405_1 AT3g53870/F5K20_170 [Arabidopsis thaliana]
gi|7630007|emb|CAB88349.1| ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|14334698|gb|AAK59527.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|16323404|gb|AAL15196.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|21618068|gb|AAM67118.1| ribosomal protein S3a-like protein [Arabidopsis thaliana]
gi|332645631|gb|AEE79152.1| 40S ribosomal protein S3-2 [Arabidopsis thaliana]
Length = 249
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/216 (90%), Positives = 204/216 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGIKVK+ML+WD KG GP TPLPD+V IH KEE
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEE 216
>gi|302761842|ref|XP_002964343.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii]
gi|300168072|gb|EFJ34676.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii]
Length = 236
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/226 (88%), Positives = 211/226 (93%), Gaps = 7/226 (3%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ+VLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 116
EKGRRIRELTSVVQKRF FPE++VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR
Sbjct: 61 EKGRRIRELTSVVQKRFSFPESTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVLY 120
Query: 117 --RACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRH 174
RACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVNE+ID AVRH
Sbjct: 121 FVRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGSPVNEFIDRAVRH 180
Query: 175 VLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYV 219
VLLRQGVLGIKVKIML+WD KGK GP+TPLPD+VTI P +EE YV
Sbjct: 181 VLLRQGVLGIKVKIMLDWDPKGKTGPSTPLPDMVTIQVPKEEEEYV 226
>gi|326531446|dbj|BAJ97727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 230
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/216 (88%), Positives = 203/216 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF AELNE+LTREL EDG++GVE+RVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MALQISKKRKFVADGVFLAELNEMLTRELGEDGFAGVEIRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FP+ VELYAEKV NRGLCA+AQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPDGGVELYAEKVLNRGLCAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAK MKFKDGYMISSG PVN+YID AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKPMKFKDGYMISSGHPVNQYIDGAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGIKVKIML+WD KGKQGP TPLPDLVTIHP K++
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPATPLPDLVTIHPPKDD 216
>gi|357116410|ref|XP_003559974.1| PREDICTED: 40S ribosomal protein S3-3-like [Brachypodium
distachyon]
Length = 276
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/228 (85%), Positives = 207/228 (90%), Gaps = 4/228 (1%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
QISKKRKFVADGVF AELNE+LTREL EDG++GVE+RVTP+RTEIIIRATRTQ+VLGEK
Sbjct: 49 AQISKKRKFVADGVFLAELNEMLTRELGEDGFAGVEIRVTPMRTEIIIRATRTQSVLGEK 108
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF FP+ VELYAEKV NRGLCA+AQAESLRYKLLGGLAVRRACYGV
Sbjct: 109 GRRIRELTSVVQKRFNFPDGGVELYAEKVLNRGLCAVAQAESLRYKLLGGLAVRRACYGV 168
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YID AVRHVLLRQGVL
Sbjct: 169 LRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDGAVRHVLLRQGVL 228
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVY----VAPATATS 226
GIKVKIML+WD KGKQGP TPLPDLVTIHP K+E +AP TA +
Sbjct: 229 GIKVKIMLDWDPKGKQGPATPLPDLVTIHPPKDEDEFLRPLAPQTAVA 276
>gi|413921202|gb|AFW61134.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 265
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/258 (78%), Positives = 210/258 (81%), Gaps = 37/258 (14%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR-- 178
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
Query: 179 -----------------------------------QGVLGIKVKIMLEWDQKGKQGPTTP 203
QGVLGIKVKIML+WD KGK GP TP
Sbjct: 181 CFATIARCNVCLSLGKHFIFDVPNVISQQTSFSVVQGVLGIKVKIMLDWDPKGKVGPITP 240
Query: 204 LPDLVTIHPLKEEVYVAP 221
LPDLVTIH KEE + P
Sbjct: 241 LPDLVTIHTPKEEDELRP 258
>gi|358346770|ref|XP_003637438.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355503373|gb|AES84576.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 237
Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/235 (81%), Positives = 213/235 (90%), Gaps = 4/235 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRK VADGV AE++E L+R LAEDGYSGVE+RVTP+RTEIII+ATRTQ VLG
Sbjct: 1 MATQMSKKRKVVADGVLNAEMHEFLSRVLAEDGYSGVEIRVTPIRTEIIIKATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+++ KRF FPENSV+LYAEKV+NRGLCA AQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTTLIHKRFNFPENSVQLYAEKVSNRGLCAAAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFK G M+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKHGDMLSSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPAT---ATSIELPV 231
VLGIKVKIML+WD KGKQGP TPLPD+VTIH P +EEVY PAT T+IE+P+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEVYNRPATILPTTNIEVPI 235
>gi|83283961|gb|ABC01888.1| 40S ribosomal protein-like protein [Solanum tuberosum]
Length = 240
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/219 (89%), Positives = 204/219 (93%), Gaps = 3/219 (1%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MAT QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVL
Sbjct: 1 MATPQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GEKGRRIR LTSVVQKRF F ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC
Sbjct: 61 GEKGRRIRSLTSVVQKRFNFKENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 120
Query: 120 YGVLRFIMESGA-KGCEV-IVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLL 177
YGVLRF+MESG GCEV VSGKLRAQRAKSMK DGYMISSG PV++Y+D+AVRHVLL
Sbjct: 121 YGVLRFVMESGTPTGCEVDSVSGKLRAQRAKSMKSTDGYMISSGLPVSDYVDAAVRHVLL 180
Query: 178 RQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
RQGVLGIKVKIML+WD KGKQGP TPLPDLVTIHP KEE
Sbjct: 181 RQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHPPKEE 219
>gi|74272607|gb|ABA01099.1| 40S ribosomal protein S3 [Chlamydomonas incerta]
Length = 230
Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/219 (86%), Positives = 202/219 (92%), Gaps = 1/219 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FP +SVELYAEKV++RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPPDSVELYAEKVSDRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSG P YID AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGHPARVYIDGAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVY 218
VLGIKVKIM EWD GK+GP TPLPD+V + P +EEVY
Sbjct: 181 VLGIKVKIMKEWDPTGKRGPRTPLPDVVKVLEPKEEEVY 219
>gi|384247377|gb|EIE20864.1| putative 40S ribosomal protein S3, partial [Coccomyxa
subellipsoidea C-169]
Length = 217
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/216 (86%), Positives = 199/216 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVF+AELNE+ TRELAE GYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATAISKKRKFVADGVFYAELNELFTRELAEHGYSGVEVRVTPLRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KGRRIRELT+VVQKRFKFPENSVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 VKGRRIRELTAVVQKRFKFPENSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIME+GAKGCEVIVSGKLRAQRAK+MKFKDGYMISSGQPVN+YIDSAVRHVLLRQG
Sbjct: 121 GVLRFIMENGAKGCEVIVSGKLRAQRAKAMKFKDGYMISSGQPVNDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGIKV+IM D GK GP +PD+V +H K+E
Sbjct: 181 VLGIKVRIMKNHDPTGKSGPKATMPDVVVVHAPKDE 216
>gi|159483497|ref|XP_001699797.1| ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Chlamydomonas reinhardtii]
gi|158281739|gb|EDP07493.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
Length = 230
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/219 (86%), Positives = 201/219 (91%), Gaps = 1/219 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MAVQISKKRKFVQDGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FP +SVELYAEKV++RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPPDSVELYAEKVSDRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSG P YID AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGNPAKVYIDGAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVY 218
VLGIKVKIM EWD GK+GP TPLPD+V + P +EEVY
Sbjct: 181 VLGIKVKIMKEWDPTGKRGPRTPLPDVVKVLEPKEEEVY 219
>gi|303276783|ref|XP_003057685.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460342|gb|EEH57636.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 232
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 200/216 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF+AELNE+L RELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MSAQISKKRKFVADGVFYAELNEMLVRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRF F E SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFGFAEGSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIME+GAKGCEV+VSGKLR QR K+MKFKDGYMISSG PV EYI+S+VRHVLLRQG
Sbjct: 121 GVLRFIMENGAKGCEVVVSGKLRGQRGKAMKFKDGYMISSGNPVREYIESSVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
+GIKVKIML+WD KG+ GP TP+PD+VTIH K+E
Sbjct: 181 CVGIKVKIMLDWDPKGRTGPKTPVPDVVTIHNPKDE 216
>gi|302829332|ref|XP_002946233.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
gi|300269048|gb|EFJ53228.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
Length = 1596
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/219 (84%), Positives = 202/219 (92%), Gaps = 1/219 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1367 MAVQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 1426
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FP +SVELYAEKV +RGLCA+AQAESLRYKLLGGLAVRRACY
Sbjct: 1427 EKGRRIRELTSVVQKRFNFPADSVELYAEKVLDRGLCAVAQAESLRYKLLGGLAVRRACY 1486
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSG P YID+AVRHVLLRQG
Sbjct: 1487 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGNPAKVYIDAAVRHVLLRQG 1546
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVY 218
VLGIKVKIM +WD GK+GP TPLPD+V + P +EE++
Sbjct: 1547 VLGIKVKIMKDWDPTGKRGPRTPLPDVVKVLEPKEEEIF 1585
>gi|307103536|gb|EFN51795.1| hypothetical protein CHLNCDRAFT_59796 [Chlorella variabilis]
Length = 230
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/220 (83%), Positives = 200/220 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA+ +SK RK VADGVF+AELNE+L REL +GYSGVEVRVTP+RTE+IIRATRTQNVLG
Sbjct: 1 MASAVSKTRKAVADGVFYAELNELLMRELGGEGYSGVEVRVTPMRTEVIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KGRRIRELTSVVQKRFKFPE SVELYAEKV NRGLCA+AQAES+RYKLLGGLAVRRACY
Sbjct: 61 VKGRRIRELTSVVQKRFKFPEGSVELYAEKVANRGLCAVAQAESMRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSG PV+EYIDSA RHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGNPVHEYIDSATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVA 220
VLGIKV+IM EWD GK GP TPLPD+VT+ KEE YV+
Sbjct: 181 VLGIKVRIMKEWDPTGKVGPRTPLPDVVTVLAPKEEEYVS 220
>gi|12847921|dbj|BAB27761.1| unnamed protein product [Mus musculus]
Length = 243
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 196/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE+LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEILTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|350537143|ref|NP_001232278.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128026|gb|ACH44524.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128027|gb|ACH44525.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128028|gb|ACH44526.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128029|gb|ACH44527.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|449284051|gb|EMC90633.1| 40S ribosomal protein S3 [Columba livia]
Length = 243
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/226 (83%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I KEE+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEIL--PTTPIS 224
>gi|327281458|ref|XP_003225465.1| PREDICTED: 40S ribosomal protein S3-like [Anolis carolinensis]
Length = 243
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/226 (83%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I KEE+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEIL--PTTPIS 224
>gi|45360887|ref|NP_989119.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
gi|38512247|gb|AAH61265.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
gi|89271265|emb|CAJ82962.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
Length = 246
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/226 (83%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I KEE+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEIL--PTTPIS 224
>gi|328767669|gb|EGF77718.1| hypothetical protein BATDEDRAFT_91509 [Batrachochytrium
dendrobatidis JAM81]
Length = 240
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/227 (79%), Positives = 198/227 (87%), Gaps = 1/227 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T ISKKRKFVADGVF+AELNE L RELAE+GY+GVEVRVTP RTEI+IRATRTQNVLG
Sbjct: 1 MTTIISKKRKFVADGVFYAELNEFLQRELAEEGYAGVEVRVTPARTEIVIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRF +PEN+VELYAEKVNNRGL A+AQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSIVQKRFNYPENTVELYAEKVNNRGLSAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+RF+MESGAKGCEV++SGKLRA RAKSMKF DG+MI SGQP EYID AVRHVLLRQG
Sbjct: 121 GVVRFVMESGAKGCEVVISGKLRAARAKSMKFVDGFMIHSGQPAKEYIDYAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPATATS 226
VLGIKVKIM EWD GK GP PLPDLVTI P +E P + ++
Sbjct: 181 VLGIKVKIMQEWDPSGKTGPKKPLPDLVTILEPKDDEPTPVPVSVST 227
>gi|155369251|ref|NP_001094409.1| 40S ribosomal protein S3-A [Xenopus laevis]
gi|133940|sp|P02350.2|RS31_XENLA RecName: Full=40S ribosomal protein S3-A; AltName: Full=S1A
gi|65091|emb|CAA40592.1| ribosomal protein S1a [Xenopus laevis]
gi|27769401|gb|AAH42230.1| Ribosomal protein S1a protein [Xenopus laevis]
Length = 246
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E + P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE--IVPTTPIS 224
>gi|90991377|dbj|BAE93070.1| ribosomal protein S3 [Lethenteron camtschaticum]
Length = 240
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/217 (83%), Positives = 193/217 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKK+KFVADGVF AE+NE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQMSKKKKFVADGVFKAEMNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSV+QKRF FPE SVELYAEKV NRGLCAIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVIQKRFNFPEGSVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+A+RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDTAIRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
VLGIKVKIML WD GK GP PLPD V+I ++EV
Sbjct: 181 VLGIKVKIMLPWDTTGKMGPKKPLPDNVSIVEPRDEV 217
>gi|387018380|gb|AFJ51308.1| 40S ribosomal protein S3-like [Crotalus adamanteus]
Length = 243
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/226 (83%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEASVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I KEE+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEIL--PTTPIS 224
>gi|71895095|ref|NP_001026007.1| 40S ribosomal protein S3 [Gallus gallus]
gi|53133686|emb|CAG32172.1| hypothetical protein RCJMB04_19g1 [Gallus gallus]
Length = 244
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/217 (85%), Positives = 192/217 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
VLGIKVKIML WD GK GP PLPD V+I KEE+
Sbjct: 181 VLGIKVKIMLPWDTSGKIGPKKPLPDHVSIVEPKEEI 217
>gi|37595356|gb|AAQ94564.1| ribosomal protein S3 [Danio rerio]
Length = 245
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/226 (83%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I KEEV P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEVL--PTTPVS 224
>gi|348522975|ref|XP_003448999.1| PREDICTED: 40S ribosomal protein S3-like [Oreochromis niloticus]
Length = 245
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/226 (83%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I KEE P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEETL--PTTPMS 224
>gi|308323395|gb|ADO28834.1| 40S ribosomal protein s3 [Ictalurus punctatus]
Length = 245
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I KEE+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEIL--PTTPVS 224
>gi|108709466|gb|ABF97261.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
Length = 205
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/198 (92%), Positives = 188/198 (94%)
Query: 24 VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRF FPEN
Sbjct: 1 MLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENG 60
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR 143
VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLR
Sbjct: 61 VELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLR 120
Query: 144 AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTP 203
AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML+WD KGK GPTTP
Sbjct: 121 AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPTTP 180
Query: 204 LPDLVTIHPLKEEVYVAP 221
LPDLVTIH KEE + P
Sbjct: 181 LPDLVTIHAPKEEEELRP 198
>gi|328683380|emb|CBL52984.1| ribosomal protein S3 [Plecoglossus altivelis]
Length = 245
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGTVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I KEE P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEETL--PTTPMS 224
>gi|417409029|gb|JAA51041.1| Putative 40s ribosomal protein s3, partial [Desmodus rotundus]
Length = 251
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 9 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 68
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 69 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 128
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 129 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 188
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 189 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 232
>gi|27735393|gb|AAH41299.1| Rpls3-b protein [Xenopus laevis]
gi|213626632|gb|AAI69756.1| Rpls3-b protein [Xenopus laevis]
gi|213627669|gb|AAI69758.1| Rpls3-b protein [Xenopus laevis]
Length = 246
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E + P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE--IVPTTPIS 224
>gi|295314928|gb|ADF97614.1| ribosomal protein S3B [Hypophthalmichthys molitrix]
Length = 245
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/226 (83%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I KEEV P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEVL--PTTPVS 224
>gi|392881646|gb|AFM89655.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/226 (83%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|149068848|gb|EDM18400.1| rCG40478, isoform CRA_j [Rattus norvegicus]
Length = 277
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|410909578|ref|XP_003968267.1| PREDICTED: 40S ribosomal protein S3-like [Takifugu rubripes]
Length = 245
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I KEE+ P T S
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKEEIL--PTTPIS 224
>gi|351696964|gb|EHA99882.1| 40S ribosomal protein S3 [Heterocephalus glaber]
Length = 243
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|148684442|gb|EDL16389.1| ribosomal protein S3, isoform CRA_d [Mus musculus]
Length = 251
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|126327841|ref|XP_001362617.1| PREDICTED: 40S ribosomal protein S3-like [Monodelphis domestica]
Length = 243
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|6755372|ref|NP_036182.1| 40S ribosomal protein S3 [Mus musculus]
gi|57164151|ref|NP_001009239.1| 40S ribosomal protein S3 [Rattus norvegicus]
gi|57102362|ref|XP_534008.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Canis lupus
familiaris]
gi|149719291|ref|XP_001494894.1| PREDICTED: 40S ribosomal protein S3-like [Equus caballus]
gi|291384249|ref|XP_002708735.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus]
gi|301759004|ref|XP_002915347.1| PREDICTED: 40S ribosomal protein S3-like [Ailuropoda melanoleuca]
gi|344296780|ref|XP_003420081.1| PREDICTED: 40S ribosomal protein S3-like [Loxodonta africana]
gi|348555219|ref|XP_003463421.1| PREDICTED: 40S ribosomal protein S3-like [Cavia porcellus]
gi|410972647|ref|XP_003992770.1| PREDICTED: 40S ribosomal protein S3 [Felis catus]
gi|51703302|sp|P62909.1|RS3_RAT RecName: Full=40S ribosomal protein S3
gi|51703309|sp|P62908.1|RS3_MOUSE RecName: Full=40S ribosomal protein S3
gi|325530283|sp|E2RH47.1|RS3_CANFA RecName: Full=40S ribosomal protein S3
gi|57728|emb|CAA35916.1| unnamed protein product [Rattus rattus]
gi|439522|emb|CAA54167.1| ribosomal protein S3 [Mus musculus]
gi|12833687|dbj|BAB22624.1| unnamed protein product [Mus musculus]
gi|12846127|dbj|BAB27042.1| unnamed protein product [Mus musculus]
gi|12848850|dbj|BAB28111.1| unnamed protein product [Mus musculus]
gi|14715107|gb|AAH10721.1| Ribosomal protein S3 [Mus musculus]
gi|15421127|gb|AAK95377.1| ribosomal protein S3 [Mus musculus]
gi|26341816|dbj|BAC34570.1| unnamed protein product [Mus musculus]
gi|56970487|gb|AAH88450.1| Ribosomal protein S3 [Rattus norvegicus]
gi|74137630|dbj|BAE35844.1| unnamed protein product [Mus musculus]
gi|74138495|dbj|BAE38059.1| unnamed protein product [Mus musculus]
gi|74146996|dbj|BAE27438.1| unnamed protein product [Mus musculus]
gi|74177801|dbj|BAE38991.1| unnamed protein product [Mus musculus]
gi|74190989|dbj|BAE39337.1| unnamed protein product [Mus musculus]
gi|74191087|dbj|BAE39379.1| unnamed protein product [Mus musculus]
gi|74195112|dbj|BAE28299.1| unnamed protein product [Mus musculus]
gi|74197190|dbj|BAE35140.1| unnamed protein product [Mus musculus]
gi|74211022|dbj|BAE37615.1| unnamed protein product [Mus musculus]
gi|74223053|dbj|BAE40668.1| unnamed protein product [Mus musculus]
gi|148684445|gb|EDL16392.1| ribosomal protein S3, isoform CRA_g [Mus musculus]
gi|149068850|gb|EDM18402.1| rCG40478, isoform CRA_l [Rattus norvegicus]
gi|327239238|gb|AEA39486.1| ribosomal protein S3 [Ailuropoda melanoleuca]
gi|327239330|gb|AEA39532.1| ribosomal protein S3 [Ailuropoda melanoleuca]
gi|431838442|gb|ELK00374.1| 40S ribosomal protein S3 [Pteropus alecto]
gi|444731541|gb|ELW71894.1| 40S ribosomal protein S3 [Tupaia chinensis]
Length = 243
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|15718687|ref|NP_000996.2| 40S ribosomal protein S3 isoform 1 [Homo sapiens]
gi|77404290|ref|NP_001029219.1| 40S ribosomal protein S3 [Bos taurus]
gi|113205854|ref|NP_001038066.1| 40S ribosomal protein S3 [Sus scrofa]
gi|293331917|ref|NP_001168943.1| uncharacterized protein LOC100382757 [Zea mays]
gi|354622982|ref|NP_001238928.1| 40S ribosomal protein S3 [Pan troglodytes]
gi|378548190|ref|NP_001243731.1| 40S ribosomal protein S3 isoform 1 [Homo sapiens]
gi|388453034|ref|NP_001253219.1| 40S ribosomal protein S3 [Macaca mulatta]
gi|395814830|ref|XP_003780943.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Otolemur garnettii]
gi|395814832|ref|XP_003780944.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Otolemur garnettii]
gi|395814834|ref|XP_003780945.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Otolemur garnettii]
gi|395814836|ref|XP_003780946.1| PREDICTED: 40S ribosomal protein S3 isoform 4 [Otolemur garnettii]
gi|397487317|ref|XP_003814749.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Pan paniscus]
gi|397487319|ref|XP_003814750.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Pan paniscus]
gi|402894681|ref|XP_003910477.1| PREDICTED: 40S ribosomal protein S3 [Papio anubis]
gi|403262289|ref|XP_003923526.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403262291|ref|XP_003923527.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403262293|ref|XP_003923528.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Saimiri boliviensis
boliviensis]
gi|426245151|ref|XP_004016377.1| PREDICTED: 40S ribosomal protein S3 [Ovis aries]
gi|417719|sp|P23396.2|RS3_HUMAN RecName: Full=40S ribosomal protein S3
gi|91207641|sp|Q3T169.1|RS3_BOVIN RecName: Full=40S ribosomal protein S3
gi|115502828|sp|Q0Z8U2.1|RS3_PIG RecName: Full=40S ribosomal protein S3
gi|187609257|pdb|2ZKQ|CC Chain c, Structure Of A Mammalian Ribosomal 40s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
gi|555941|gb|AAB60336.1| ribosomal protein S3 [Homo sapiens]
gi|555943|gb|AAB60337.1| ribosomal protein S3 [Homo sapiens]
gi|555945|gb|AAB60338.1| ribosomal protein S3 [Homo sapiens]
gi|13111933|gb|AAH03137.1| Ribosomal protein S3 [Homo sapiens]
gi|17932970|dbj|BAB79476.1| ribosomal protein S3 [Homo sapiens]
gi|21707655|gb|AAH34149.1| Ribosomal protein S3 [Homo sapiens]
gi|48734761|gb|AAH71917.1| Ribosomal protein S3 [Homo sapiens]
gi|54781367|gb|AAV40835.1| ribosomal protein S3 [Homo sapiens]
gi|72679750|gb|AAI00285.1| Ribosomal protein S3 [Homo sapiens]
gi|74268226|gb|AAI02091.1| Ribosomal protein S3 [Bos taurus]
gi|110006645|gb|ABG48767.1| ribosomal protein S3 [Sus scrofa]
gi|119595369|gb|EAW74963.1| ribosomal protein S3 [Homo sapiens]
gi|123987601|gb|ABM83814.1| ribosomal protein S3 [synthetic construct]
gi|123999104|gb|ABM87135.1| ribosomal protein S3 [synthetic construct]
gi|189053630|dbj|BAG35882.1| unnamed protein product [Homo sapiens]
gi|208967330|dbj|BAG73679.1| ribosomal protein S3 [synthetic construct]
gi|223973891|gb|ACN31133.1| unknown [Zea mays]
gi|296479794|tpg|DAA21909.1| TPA: 40S ribosomal protein S3 [Bos taurus]
gi|387542628|gb|AFJ71941.1| 40S ribosomal protein S3 [Macaca mulatta]
gi|440899677|gb|ELR50946.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 243
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|60652571|gb|AAX28980.1| ribosomal protein S3 [synthetic construct]
Length = 244
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|392873892|gb|AFM85778.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|392873570|gb|AFM85617.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392873790|gb|AFM85727.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874028|gb|AFM85846.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874738|gb|AFM86201.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874910|gb|AFM86287.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392875972|gb|AFM86818.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876244|gb|AFM86954.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876330|gb|AFM86997.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876834|gb|AFM87249.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392879612|gb|AFM88638.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881068|gb|AFM89366.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881436|gb|AFM89550.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392882158|gb|AFM89911.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392882756|gb|AFM90210.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392884244|gb|AFM90954.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|209733852|gb|ACI67795.1| 40S ribosomal protein S3 [Salmo salar]
Length = 250
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/222 (83%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 6 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 65
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 66 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 125
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 126 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 185
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAP 221
VLGIKVKIML WD GK GP PLPD V+I P E+V P
Sbjct: 186 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEQVPSTP 227
>gi|12848978|dbj|BAB28159.1| unnamed protein product [Mus musculus]
Length = 243
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVGPKDEIL--PTTPIS 224
>gi|432889332|ref|XP_004075224.1| PREDICTED: 40S ribosomal protein S3-like [Oryzias latipes]
Length = 245
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/235 (80%), Positives = 199/235 (84%), Gaps = 4/235 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT---ATSIELPV 231
VLGIKVKIML WD GK GP PLPD V+I P +E + AP + E+PV
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEESLPTAPISEQKGAKPEVPV 235
>gi|225707598|gb|ACO09645.1| 40S ribosomal protein S3 [Osmerus mordax]
Length = 245
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/226 (82%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I KEE P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEETL--PTTPMS 224
>gi|223646682|gb|ACN10099.1| 40S ribosomal protein S3 [Salmo salar]
gi|223672531|gb|ACN12447.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/222 (83%), Positives = 193/222 (86%), Gaps = 1/222 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAP 221
VLGIKVKIML WD GK GP PLPD V+I P E+V P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEQVPSTP 222
>gi|2500399|sp|P79891.1|RS3_AMBME RecName: Full=40S ribosomal protein S3
gi|1836060|gb|AAB46849.1| ribosomal protein S3 [Ambystoma mexicanum]
Length = 253
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLAWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|124300789|dbj|BAF45890.1| ribosomal protein S3 [Solea senegalensis]
Length = 245
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 191/216 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGIKVKIML WD GK GP PLPD V+I KEE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>gi|392876674|gb|AFM87169.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/217 (84%), Positives = 192/217 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
VLGIKVKIML WD GK GP PLPD V+I K+E+
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEI 217
>gi|7765076|gb|AAB19349.2| S3 ribosomal protein [Homo sapiens]
Length = 243
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISK+RKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|392875182|gb|AFM86423.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876076|gb|AFM86870.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876116|gb|AFM86890.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392877034|gb|AFM87349.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392877852|gb|AFM87758.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878058|gb|AFM87861.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878198|gb|AFM87931.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878664|gb|AFM88164.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392880050|gb|AFM88857.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392880832|gb|AFM89248.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881218|gb|AFM89441.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881252|gb|AFM89458.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881368|gb|AFM89516.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392883684|gb|AFM90674.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/217 (84%), Positives = 192/217 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
VLGIKVKIML WD GK GP PLPD V+I K+E+
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEI 217
>gi|255081971|ref|XP_002508204.1| predicted protein [Micromonas sp. RCC299]
gi|226523480|gb|ACO69462.1| predicted protein [Micromonas sp. RCC299]
Length = 233
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/215 (83%), Positives = 194/215 (90%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGE
Sbjct: 3 SGNISKKRKFVADGVFFAELNELLIRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTS+VQKRF F E SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACYG
Sbjct: 63 KGRRIRELTSLVQKRFGFAEGSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIME+GAKG EV+VSGKLR QR K+MKFKDGYMISSG PV EYI+SA HVLLRQG
Sbjct: 123 VLRFIMENGAKGAEVVVSGKLRGQRGKAMKFKDGYMISSGNPVREYIESACLHVLLRQGC 182
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
+G+KVKIML+WD KG+ GP TP+PD VTIH K+E
Sbjct: 183 VGVKVKIMLDWDPKGRTGPKTPIPDTVTIHNPKDE 217
>gi|392873640|gb|AFM85652.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKV+IML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVRIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|74219656|dbj|BAE29595.1| unnamed protein product [Mus musculus]
Length = 243
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQ+RF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQERFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|197101391|ref|NP_001127020.1| 40S ribosomal protein S3 [Pongo abelii]
gi|75061590|sp|Q5R465.1|RS3_PONAB RecName: Full=40S ribosomal protein S3
gi|55733547|emb|CAH93451.1| hypothetical protein [Pongo abelii]
gi|62897657|dbj|BAD96768.1| ribosomal protein S3 variant [Homo sapiens]
Length = 243
Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAE+V RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|392873496|gb|AFM85580.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSM+F DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMEFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|392881092|gb|AFM89378.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRE T+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIREFTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|319004942|ref|NP_001187068.1| 40S ribosomal protein S3 [Ictalurus punctatus]
gi|22001962|sp|Q90YS2.1|RS3_ICTPU RecName: Full=40S ribosomal protein S3
gi|15294015|gb|AAK95184.1|AF402810_1 40S ribosomal protein S3 [Ictalurus punctatus]
Length = 245
Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FP SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPRGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I KEE+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEIL--PTTPVS 224
>gi|197632571|gb|ACH71009.1| ribosomal protein S3-2 [Salmo salar]
gi|209732816|gb|ACI67277.1| 40S ribosomal protein S3 [Salmo salar]
gi|223647360|gb|ACN10438.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/226 (81%), Positives = 196/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG++GCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSRGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E + P+T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE--LVPSTPIS 224
>gi|147903619|ref|NP_001085315.1| 40S ribosomal protein S3-B [Xenopus laevis]
gi|1350988|sp|P47835.1|RS32_XENLA RecName: Full=40S ribosomal protein S3-B; AltName: Full=S1B
gi|587600|emb|CAA84291.1| ribosomal protein S1 [Xenopus laevis]
gi|587602|emb|CAA84290.1| ribosomal protein [Xenopus laevis]
Length = 246
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 185/226 (81%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLG
Sbjct: 1 MAAQMSKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E + P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE--IVPTTPIS 224
>gi|41056077|ref|NP_957447.1| 40S ribosomal protein S3 [Danio rerio]
gi|28374213|gb|AAH45902.1| Ribosomal protein S3 [Danio rerio]
gi|182891740|gb|AAI65099.1| Rps3 protein [Danio rerio]
Length = 245
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 184/217 (84%), Positives = 191/217 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGGVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
VLGIKVKIML WD GK GP PLPD V+I KEEV
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEV 217
>gi|392880950|gb|AFM89307.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII A RTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILAARTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|70909551|emb|CAJ17197.1| ribosomal protein S3e [Scarabaeus laticollis]
Length = 241
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 181/224 (80%), Positives = 194/224 (86%), Gaps = 1/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT +SKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATSVSKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE+SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
VLGIKVKIML WD GK GP PLPD V+ + P E + + P++
Sbjct: 181 VLGIKVKIMLPWDPNGKTGPKRPLPDNVSVVEPKDEPLPLVPSS 224
>gi|392873614|gb|AFM85639.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV+ Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVSYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|209732420|gb|ACI67079.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 185/226 (81%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E P+T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDETI--PSTPVS 224
>gi|32532|emb|CAA39248.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAE LRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|260833516|ref|XP_002611703.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae]
gi|229297074|gb|EEN67713.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae]
Length = 226
Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 182/217 (83%), Positives = 191/217 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA Q+SKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQVSKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFGFAEGTVELYAEKVAQRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P N Y+DSAVRHV+LRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPANSYVDSAVRHVMLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
VLGIKVKIML WD GK GP PLPD V+I K+E+
Sbjct: 181 VLGIKVKIMLPWDPTGKTGPKKPLPDHVSIVEPKDEI 217
>gi|197632569|gb|ACH71008.1| ribosomal protein S3-1 [Salmo salar]
gi|209738348|gb|ACI70043.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/226 (81%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E P+T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDETI--PSTPVS 224
>gi|160550139|gb|ABX44774.1| putative 40S ribosomal protein RPS3 [Flustra foliacea]
Length = 234
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/226 (81%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA Q+SKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MAAQVSKKRKFVNDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKVNNRGLCAIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFNFPEGTVELYAEKVNNRGLCAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAK+MKF DG MI SG+P EY+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGEPSREYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WDQ GK GP PLPD V I K+E PAT S
Sbjct: 181 VLGIKVKIMLPWDQTGKIGPKKPLPDNVNIVEPKDE--STPATPYS 224
>gi|296217041|ref|XP_002754860.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Callithrix
jacchus]
gi|390470016|ref|XP_003734218.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Callithrix
jacchus]
gi|390470018|ref|XP_003734219.1| PREDICTED: 40S ribosomal protein S3-like isoform 3 [Callithrix
jacchus]
gi|390470020|ref|XP_003734220.1| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Callithrix
jacchus]
Length = 243
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMES AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESSAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|402913757|ref|XP_003919330.1| PREDICTED: 40S ribosomal protein S3-like [Papio anubis]
Length = 243
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEV VTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVLVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|46811251|gb|AAT01919.1| 40S ribosomal protein S3 [Pseudopleuronectes americanus]
Length = 246
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 191/216 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGIKVKIML WD GK GP PLPD V+I KEE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>gi|392877392|gb|AFM87528.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFI ESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFITESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|392875076|gb|AFM86370.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SV LYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVGLYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|50344456|emb|CAH04314.1| S3e ribosomal protein [Carabus granulatus]
Length = 239
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/229 (79%), Positives = 196/229 (85%), Gaps = 1/229 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MTTTISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE+SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIEL 229
VLGIKVKIML WD GK GP PLPD V++ KEE+ + P + +++
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKRPLPDNVSVVEPKEEI-IPPFPQSDVKM 228
>gi|13097759|gb|AAH03577.1| Unknown (protein for IMAGE:3544292), partial [Homo sapiens]
gi|15341992|gb|AAH13196.1| Unknown (protein for IMAGE:4347401), partial [Homo sapiens]
Length = 242
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/225 (82%), Positives = 194/225 (86%), Gaps = 2/225 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGE
Sbjct: 1 AVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGE 60
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYG
Sbjct: 61 KGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 120
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGV
Sbjct: 121 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 180
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
LGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 LGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 223
>gi|223646268|gb|ACN09892.1| 40S ribosomal protein S3 [Salmo salar]
gi|223672115|gb|ACN12239.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/226 (81%), Positives = 195/226 (86%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPECNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E P+T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDETI--PSTPVS 224
>gi|74222288|dbj|BAE26946.1| unnamed protein product [Mus musculus]
Length = 243
Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/226 (81%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F ELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKVELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGC+V+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCKVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|392877878|gb|AFM87771.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/210 (86%), Positives = 188/210 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
VLGIKVKIML WD GK GP PLPD V+I
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSI 210
>gi|392881056|gb|AFM89360.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQK F FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKGFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|392880630|gb|AFM89147.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 183/217 (84%), Positives = 191/217 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRK VADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKLVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
VLGIKVKIML WD GK GP PLPD V+I K+E+
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEI 217
>gi|392878050|gb|AFM87857.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 183/217 (84%), Positives = 191/217 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHV LRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVSLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
VLGIKVKIML WD GK GP PLPD V+I K+E+
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEI 217
>gi|47211107|emb|CAF94963.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK P PLPD V+I KEE+ P T S
Sbjct: 181 VLGIKVKIMLPWDPTGKIVPKKPLPDHVSIVEPKEEIM--PTTPIS 224
>gi|392873428|gb|AFM85546.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF PE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGSPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|156408429|ref|XP_001641859.1| predicted protein [Nematostella vectensis]
gi|156228999|gb|EDO49796.1| predicted protein [Nematostella vectensis]
Length = 240
Score = 365 bits (938), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 183/226 (80%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP+RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGLFKAELNEFLTRELAEDGYSGVEVRVTPIRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFGFPEGSVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ +G+P Y+D+AVRHV LRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMVHAGEPTTHYVDTAVRHVYLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E V PA TS
Sbjct: 181 VLGIKVKIMLPWDPTGKTGPKKPLPDQVSIVEPKDE--VVPAQPTS 224
>gi|90080277|dbj|BAE89620.1| unnamed protein product [Macaca fascicularis]
Length = 243
Score = 365 bits (938), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK G PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPTGKIGLKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|225715464|gb|ACO13578.1| 40S ribosomal protein S3 [Esox lucius]
Length = 247
Score = 365 bits (937), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 184/224 (82%), Positives = 193/224 (86%), Gaps = 1/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RG CAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGPCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
VLGIKVKIML WD GK GP PLPD V+I P E+V P +
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEQVPSTPIS 224
>gi|121511934|gb|ABM55418.1| 40S ribosomal protein S3 [Xenopsylla cheopis]
Length = 243
Score = 365 bits (937), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 181/231 (78%), Positives = 197/231 (85%), Gaps = 1/231 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T ISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MTTAISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F +NSVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFNFIDNSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSIELP 230
VLGIKVKIML +D GKQGP PLPD V+ + P +E + P++ + + P
Sbjct: 181 VLGIKVKIMLPFDPAGKQGPKKPLPDNVSVVDPKEEPLPTMPSSESKVPKP 231
>gi|392875060|gb|AFM86362.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 365 bits (937), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 186/226 (82%), Positives = 194/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRA Y
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRARY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|166952343|gb|ABZ04254.1| ribosomal protein rps3 [Lineus viridis]
Length = 213
Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/210 (85%), Positives = 188/210 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQNVLG
Sbjct: 1 MATPISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATKTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE++VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPESTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPTNDYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
VLGIKVKIML WD GK GP PLPD V+I
Sbjct: 181 VLGIKVKIMLPWDPTGKLGPKRPLPDHVSI 210
>gi|320163406|gb|EFW40305.1| ribosomal protein S3 [Capsaspora owczarzaki ATCC 30864]
Length = 252
Score = 362 bits (930), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 181/222 (81%), Positives = 194/222 (87%), Gaps = 1/222 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T +SKKRKFV DGVF AELNE LTRELAE+GYSGVEVRVTP RTEIIIRATRTQNVLGEK
Sbjct: 4 TPMSKKRKFVTDGVFRAELNEFLTRELAEEGYSGVEVRVTPTRTEIIIRATRTQNVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF FPENSVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFGFPENSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKG EV+VSGKLR QRAK+MKF+DG+M+ SG P YID AVRHVLLRQGVL
Sbjct: 124 LRFIMESGAKGVEVVVSGKLRGQRAKAMKFQDGFMVHSGFPTTYYIDRAVRHVLLRQGVL 183
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
G+KVKIML D G+ GP TPLPD+VTI P E + AP++
Sbjct: 184 GLKVKIMLAQDPTGRAGPKTPLPDIVTILEPKDEALPSAPSS 225
>gi|355752470|gb|EHH56590.1| hypothetical protein EGM_06037 [Macaca fascicularis]
Length = 243
Score = 362 bits (930), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 184/226 (81%), Positives = 193/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAE+ YSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEECYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRR RELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRTRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|443732033|gb|ELU16925.1| hypothetical protein CAPTEDRAFT_171942 [Capitella teleta]
Length = 242
Score = 362 bits (928), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 180/216 (83%), Positives = 189/216 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVA+GVF AELNE TRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQISKKRKFVANGVFKAELNEFFTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFQEGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGNPTNDYVDKAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGI+VKIML WD GK GP PLPD V+I K+E
Sbjct: 181 VLGIQVKIMLPWDPTGKIGPKRPLPDHVSIVEPKDE 216
>gi|225714094|gb|ACO12893.1| 40S ribosomal protein S3 [Lepeophtheirus salmonis]
Length = 237
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 177/216 (81%), Positives = 191/216 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+TQISKKRKFV+DGVF AELNE LTRELAEDGYSGVEV V P+RTEIII ATRTQNVLG
Sbjct: 1 MSTQISKKRKFVSDGVFKAELNEFLTRELAEDGYSGVEVHVAPLRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRIRELTSVVQKRF FPENSVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 DKGRRIRELTSVVQKRFSFPENSVELYAEKVAARGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLR+IMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRYIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTACRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGIKVKIML +D GK GP PLPD V++ KEE
Sbjct: 181 VLGIKVKIMLPFDVTGKSGPRKPLPDTVSVAEPKEE 216
>gi|163658467|gb|ABY28373.1| ribosomal protein S3 [Oncorhynchus masou formosanus]
Length = 245
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 183/226 (80%), Positives = 193/226 (85%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGV VRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVGVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMK DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKSVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E P+T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKEPLPDHVSIVEPKDETI--PSTPVS 224
>gi|338726172|ref|XP_003365268.1| PREDICTED: 40S ribosomal protein S3-like [Equus caballus]
Length = 243
Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 183/226 (80%), Positives = 192/226 (84%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKR+FVA G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRQFVAHGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVAKRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AV HVLLRQG
Sbjct: 121 GVLRFTMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVCHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|386869503|ref|NP_001247435.1| 40S ribosomal protein S3 isoform 2 [Homo sapiens]
gi|397487321|ref|XP_003814751.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Pan paniscus]
Length = 259
Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 187/242 (77%), Positives = 195/242 (80%), Gaps = 18/242 (7%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVEL----------------YAEKVNNRGLCAIAQAES 104
EKGRRIRELT+VVQKRF FPE SVEL YAEKV RGLCAIAQAES
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELKIMVMVTGYPLLPLKLYAEKVATRGLCAIAQAES 120
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV 164
LRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV
Sbjct: 121 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 180
Query: 165 NEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATA 224
N Y+D+AVRHVLLRQGVLGIKVKIML WD GK GP PLPD V+I K+E+ P T
Sbjct: 181 NYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL--PTTP 238
Query: 225 TS 226
S
Sbjct: 239 IS 240
>gi|221126927|ref|XP_002162713.1| PREDICTED: 40S ribosomal protein S3-like [Hydra magnipapillata]
Length = 239
Score = 360 bits (924), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 178/223 (79%), Positives = 190/223 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA I+KK+KFV+DGVF AELNE L RELAEDGYSGVEVRVTP+RTEIII ATRTQNVLG
Sbjct: 1 MAAPITKKKKFVSDGVFKAELNEFLKRELAEDGYSGVEVRVTPLRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKLL G VR+ACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEGSVELYAEKVATRGLCAIAQCESLRYKLLAGAPVRKACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+RFIMESGAKGCEVIVSGKLR QRAKSMKF DG+MI SG P+ EYID+AVRHV LRQG
Sbjct: 121 GVVRFIMESGAKGCEVIVSGKLRGQRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPAT 223
VLGIKVKIML WD GK GP PLPD V+I KEEV+ P +
Sbjct: 181 VLGIKVKIMLPWDPTGKTGPKKPLPDHVSIVEPKEEVFYPPTS 223
>gi|156553282|ref|XP_001599651.1| PREDICTED: 40S ribosomal protein S3-like [Nasonia vitripennis]
Length = 242
Score = 360 bits (923), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/231 (77%), Positives = 196/231 (84%), Gaps = 3/231 (1%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEK
Sbjct: 4 TTISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPQRTEIILMATHTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF F ++SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNFKDHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE-VYVAPATATSI--ELP 230
GIKVKIML WD GK GP PLPD V + KEE +Y APA+ + +LP
Sbjct: 184 GIKVKIMLPWDPNGKNGPKKPLPDNVIVQEPKEETLYSAPASEAKVVKDLP 234
>gi|326533734|dbj|BAK05398.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 359 bits (922), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 174/218 (79%), Positives = 191/218 (87%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ Q+SK+RKFVADGVF AE+NE TRELAE+GYSG EVRVT RTEIIIRAT TQ VLGE
Sbjct: 5 SAQLSKRRKFVADGVFNAEINEFFTRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTS+VQKRFKFPENS+ELYAEKV NRGL A+AQAESLRYKLLGGLAVRRACYG
Sbjct: 65 KGRRIRELTSLVQKRFKFPENSLELYAEKVQNRGLSAVAQAESLRYKLLGGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAK+MKF DG+MI SGQP +++D AVRHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKAMKFTDGFMIHSGQPARDFVDQAVRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV 219
LGIKVKIM WD +GK GP+TPLPD +TI KEE V
Sbjct: 185 LGIKVKIMKAWDPEGKLGPSTPLPDQITILDPKEEASV 222
>gi|198434172|ref|XP_002129244.1| PREDICTED: similar to putative 40S ribosomal protein RPS3 [Ciona
intestinalis]
Length = 260
Score = 359 bits (922), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 179/228 (78%), Positives = 193/228 (84%), Gaps = 1/228 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV DG+F AELNE+L RELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVNDGLFKAELNELLWRELAEDGYSGVEVRVTPSRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKF ++ VELYAEKV NRGLCA AQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAMVQKRFKFKDDGVELYAEKVANRGLCATAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAK+MKF DG MI SG PV EY+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVREYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPATATSI 227
VLGIKVKIML WD +GK GP PLPD V I P EE P + + +
Sbjct: 181 VLGIKVKIMLPWDPQGKIGPKKPLPDNVNIVEPKDEEAITGPRSESKV 228
>gi|149287156|gb|ABR23477.1| 40S ribosomal protein S3 [Ornithodoros parkeri]
Length = 240
Score = 359 bits (921), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 180/228 (78%), Positives = 194/228 (85%), Gaps = 1/228 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +QISKKRKFVADGVF AELNE L RELAEDGYSGVEVRVTP TEIII ATRTQ+VLG
Sbjct: 1 MTSQISKKRKFVADGVFKAELNEFLRRELAEDGYSGVEVRVTPQNTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN+VELYAEKV +RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPENTVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P N+Y+++AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPATATSI 227
VLGIKVKIML WD GK GP PLPD V+I P E + P + I
Sbjct: 181 VLGIKVKIMLPWDPNGKLGPKRPLPDHVSIVEPKPETLPTEPYSEPKI 228
>gi|72058324|ref|XP_798304.1| PREDICTED: 40S ribosomal protein S3-A-like [Strongylocentrotus
purpuratus]
Length = 279
Score = 358 bits (919), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 177/216 (81%), Positives = 190/216 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MATQISKKRKFVADGVFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F EN+VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFNFAENTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV +Y+D A+RHV+LRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGAPVKDYVDVAIRHVMLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGIKVKIM +D GK GP PLPD+++I KEE
Sbjct: 181 VLGIKVKIMRPFDVTGKTGPKKPLPDVISISEPKEE 216
>gi|332220518|ref|XP_003259402.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Nomascus
leucogenys]
gi|441635552|ref|XP_003259404.2| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Nomascus
leucogenys]
gi|441635555|ref|XP_004089921.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635558|ref|XP_004089922.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635561|ref|XP_004089923.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635564|ref|XP_004089924.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635567|ref|XP_004089925.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635570|ref|XP_004089926.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635573|ref|XP_004089927.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
Length = 243
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 180/226 (79%), Positives = 192/226 (84%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M QISKKRKF+ADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MVVQISKKRKFIADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRI ELT+VVQKRF FPE VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIPELTAVVQKRFGFPEGIVELYAEKVATRGLCAIAQAESLRYKLVGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFI+ESGAKGC+V+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIIESGAKGCKVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPTGKTGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|37724563|gb|AAO20336.1| ribosomal protein S3 [Hydra vulgaris]
Length = 238
Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 177/222 (79%), Positives = 189/222 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A I+KK+KFV+DGVF AELNE L RELAEDGYSGVEVRVTP+RTEIII ATRTQNVLGE
Sbjct: 1 AAPITKKKKFVSDGVFKAELNEFLKRELAEDGYSGVEVRVTPLRTEIIILATRTQNVLGE 60
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKLL G VR+ACYG
Sbjct: 61 KGRRIRELTSVVQKRFNFPEGSVELYAEKVATRGLCAIAQCESLRYKLLAGAPVRKACYG 120
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
V+RFIMESGAKGCEVIVSGKLR QRAKSMKF DG+MI SG P+ EYID+AVRHV LRQGV
Sbjct: 121 VVRFIMESGAKGCEVIVSGKLRGQRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQGV 180
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPAT 223
LGIKVKIML WD GK GP PLPD V+I KEEV+ P +
Sbjct: 181 LGIKVKIMLPWDPTGKTGPKKPLPDHVSIVEPKEEVFYPPTS 222
>gi|145345927|ref|XP_001417450.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
gi|144577677|gb|ABO95743.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
Length = 231
Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 174/230 (75%), Positives = 196/230 (85%), Gaps = 1/230 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+AT ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVR TP+RTEIIIRATRT NVLG
Sbjct: 2 VATAISKKRKFVADGVFFAELNEMLVRELAEDGYSGVEVRQTPMRTEIIIRATRTANVLG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQ+RF+ E SVELYAE+VNNRGLCAIAQ ESLRYKLLGGLAVRRACY
Sbjct: 62 EKGRRIRELTTLVQRRFQMAEGSVELYAERVNNRGLCAIAQCESLRYKLLGGLAVRRACY 121
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLR+IME+GAKG EV+VSGKLR QRAK+MKFKDGYMISSG PV EYI S RH LLRQG
Sbjct: 122 GVLRYIMEAGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVREYIVSCTRHALLRQG 181
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATSIEL 229
+G++VKIML+ D KG+ GP+TP+PD V IH P +E P +E+
Sbjct: 182 TIGMRVKIMLDHDPKGRNGPSTPIPDTVVIHTPKDDEDMAKPYVGKEMEM 231
>gi|318087144|gb|ADV40164.1| ribosomal protein S3 [Latrodectus hesperus]
Length = 238
Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 179/214 (83%), Positives = 187/214 (87%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISKKRKFVADGVF AELNE L RELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEK
Sbjct: 4 TTISKKRKFVADGVFKAELNEFLRRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNFPEGSVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++AVRHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGNPTNDYVETAVRHVLLRQGVL 183
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
GIKVKIML WD GK GP PLPD V+I KEE
Sbjct: 184 GIKVKIMLPWDPVGKIGPKNPLPDNVSITEPKEE 217
>gi|242005202|ref|XP_002423460.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis]
gi|212506548|gb|EEB10722.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis]
Length = 238
Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/217 (81%), Positives = 188/217 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MATPISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KG+RIRELTSVVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 DKGKRIRELTSVVQKRFNFPEGTVELYAEKVAARGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P N+Y+D A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVDCATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
VLGIKVKIML D GK GP PLPD V + KEE+
Sbjct: 181 VLGIKVKIMLRCDPNGKVGPKKPLPDCVEVPGPKEEI 217
>gi|288869512|ref|NP_001165863.1| ribosomal protein S3 [Tribolium castaneum]
gi|270006106|gb|EFA02554.1| hypothetical protein TcasGA2_TC008261 [Tribolium castaneum]
Length = 241
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 178/226 (78%), Positives = 190/226 (84%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATPISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EK RRIRELTSVVQKRF FPENSV LY EKV NRGLCAIAQAESLR+KL+GGLAVRRACY
Sbjct: 61 EKNRRIRELTSVVQKRFNFPENSVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLR+IME GAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRYIMECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V++ KEE+ PA +S
Sbjct: 181 VLGIKVKIMLPWDPSGKTGPKKPLPDNVSVVEPKEEIL--PAYPSS 224
>gi|412989948|emb|CCO20590.1| 40S ribosomal protein S3 [Bathycoccus prasinos]
Length = 233
Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 176/219 (80%), Positives = 192/219 (87%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVR TPV+ EIIIRATRTQNVLGE
Sbjct: 7 SLNISKKRKFVADGVFFAELNEMLVRELAEDGYSGVEVRSTPVKMEIIIRATRTQNVLGE 66
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTS+VQKRF F E +VELYAEKV NRGLCAI+Q ESLRYKLLGGLAVRRACYG
Sbjct: 67 KGRRIRELTSLVQKRFGFAEGAVELYAEKVANRGLCAISQCESLRYKLLGGLAVRRACYG 126
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIME+GAKG EVIVSGKLR QRAK+MKFKDGYMISSG PV EYI S+ RHVLLRQGV
Sbjct: 127 VLRFIMENGAKGAEVIVSGKLRGQRAKAMKFKDGYMISSGNPVREYIVSSTRHVLLRQGV 186
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVA 220
+GIKVKIML+ D KG+ GP TP+PD + I KE+ +A
Sbjct: 187 VGIKVKIMLDHDPKGRMGPKTPIPDTIIIKEPKEDENMA 225
>gi|449885323|gb|AGF29412.1| ribosomal protein S3 [Phaedon cochleariae]
Length = 240
Score = 356 bits (913), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 175/217 (80%), Positives = 186/217 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATTISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EK RRIRELTSVVQKRF FPENSV LY EKV NRGLCAIAQAESLR+KL+GGLAVRRACY
Sbjct: 61 EKNRRIRELTSVVQKRFNFPENSVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLR+IME GAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRYIMECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
VLGIKVKIML WD GK GP PLPD V++ KEE+
Sbjct: 181 VLGIKVKIMLPWDPSGKTGPKKPLPDNVSVVEPKEEI 217
>gi|358056010|dbj|GAA98355.1| hypothetical protein E5Q_05041 [Mixia osmundae IAM 14324]
Length = 270
Score = 356 bits (913), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 175/224 (78%), Positives = 191/224 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+T ISK+RKFVADGVF+AEL+E TREL+ +GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSTTISKRRKFVADGVFYAELSEFFTRELSSEGYSGCEVRVTRARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKF E SVELYAEKV NRGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFGEGSVELYAEKVQNRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDQAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATA 224
VLGIKVKIM WD +G+ GP+ PLPD VTI KEE V P ++
Sbjct: 181 VLGIKVKIMKGWDPEGRTGPSKPLPDSVTIMDAKEEAPVGPPSS 224
>gi|148684443|gb|EDL16390.1| ribosomal protein S3, isoform CRA_e [Mus musculus]
Length = 243
Score = 356 bits (913), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 181/226 (80%), Positives = 190/226 (84%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRH +
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHPSVPFS 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|321464706|gb|EFX75712.1| hypothetical protein DAPPUDRAFT_306633 [Daphnia pulex]
Length = 242
Score = 355 bits (911), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 179/221 (80%), Positives = 190/221 (85%), Gaps = 1/221 (0%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MAT QISKKRKFVA GVF AELN LTRELAEDGYSGVEVR+ P RTEIII ATRTQNVL
Sbjct: 1 MATAQISKKRKFVAGGVFKAELNAFLTRELAEDGYSGVEVRLAPTRTEIIILATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GEKGRRIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 61 GEKGRRIRELTSVVQKRFGFQEGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P N Y+D+AVRHVLLRQ
Sbjct: 121 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNVYVDTAVRHVLLRQ 180
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVA 220
GVLGIKVKIML WD K GP PLPD V+I K+E ++A
Sbjct: 181 GVLGIKVKIMLPWDPNNKNGPKRPLPDNVSILEPKDETHIA 221
>gi|28630346|gb|AAN77894.1| ribosomal protein S3 [Petromyzon marinus]
Length = 206
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/200 (86%), Positives = 181/200 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKK+KFVADGVF AE+NE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQMSKKKKFVADGVFKAEMNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSV+QKRF FPE SVELYAEKV NRGLCAIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVIQKRFNFPEGSVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+A+RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDTAIRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGP 200
LGIKVKIML WD GK GP
Sbjct: 181 GLGIKVKIMLPWDTTGKMGP 200
>gi|121543809|gb|ABM55569.1| putative ribosomal protein S3 [Maconellicoccus hirsutus]
Length = 248
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/210 (81%), Positives = 184/210 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +SKKRKFVADGVF AELNE L RELAEDGYSGV++RVTP RTEIII ATRTQNVLG
Sbjct: 1 MTRTVSKKRKFVADGVFKAELNEFLMRELAEDGYSGVQIRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFP+ S+ELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPDGSIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P +Y+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPCVDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
VLGIKVKIML WD GK GP PLPD V +
Sbjct: 181 VLGIKVKIMLPWDPTGKNGPKKPLPDNVNV 210
>gi|118793920|ref|XP_321155.3| AGAP001910-PA [Anopheles gambiae str. PEST]
gi|116116043|gb|EAA01737.4| AGAP001910-PA [Anopheles gambiae str. PEST]
Length = 244
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/231 (76%), Positives = 193/231 (83%), Gaps = 1/231 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNTVSKKRRFVANGMFHAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VV+KRF F SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVRKRFGFAPGSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P NEY+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSIELP 230
VLGIKVKIML WD GK GP PLPD V+ + P E +Y +P + ++P
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSSPRSEPKFKVP 231
>gi|112984112|ref|NP_001037253.1| ribosomal protein S3 [Bombyx mori]
gi|54609285|gb|AAV34858.1| ribosomal protein S3 [Bombyx mori]
Length = 243
Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/222 (78%), Positives = 189/222 (85%), Gaps = 1/222 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
GIKVKIML WDQ+GK GP P PD + + P E V + P +
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTS 225
>gi|357611706|gb|EHJ67618.1| 40S ribosomal protein S3 [Danaus plexippus]
Length = 245
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 176/224 (78%), Positives = 190/224 (84%), Gaps = 2/224 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE+SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
GIKVKIML WDQ+GK GP P PD + + K+E AP TS
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDE--PAPLEPTS 225
>gi|389608265|dbj|BAM17744.1| ribosomal protein S3 [Papilio xuthus]
Length = 244
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/214 (80%), Positives = 186/214 (86%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
GIKVKIML WDQ+GK GP P PD + + K+E
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDE 217
>gi|1350990|sp|P48153.1|RS3_MANSE RecName: Full=40S ribosomal protein S3
gi|527680|gb|AAB05575.1| ribosomal protein S3 [Manduca sexta]
Length = 243
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 176/224 (78%), Positives = 189/224 (84%), Gaps = 2/224 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
GIKVKIML WDQ+GK GP P PD + + K+E AP TS
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDE--PAPLEPTS 225
>gi|395521196|ref|XP_003764704.1| PREDICTED: 40S ribosomal protein S3 [Sarcophilus harrisii]
Length = 245
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/217 (82%), Positives = 187/217 (86%), Gaps = 2/217 (0%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
+FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIREL
Sbjct: 12 QFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 71
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
T+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES
Sbjct: 72 TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 131
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
GAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKVKIM
Sbjct: 132 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 191
Query: 190 LEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
L WD GK GP PLPD V+I K+E+ P T S
Sbjct: 192 LPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 226
>gi|332375642|gb|AEE62962.1| unknown [Dendroctonus ponderosae]
Length = 232
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 176/232 (75%), Positives = 192/232 (82%), Gaps = 1/232 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATTISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EK RRIRELTSVVQKRF FPENS+ LY EKV NRGLCAIAQAESLR+KL+GGLAVRRACY
Sbjct: 61 EKNRRIRELTSVVQKRFNFPENSIVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLR+IME GAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRYIMECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSIELPV 231
VLGIKVKIML +D GK GP PLPD V+ + P E V P++ ++PV
Sbjct: 181 VLGIKVKIMLPYDPTGKIGPKKPLPDNVSVVEPKDEVVPTVPSSEIKADVPV 232
>gi|315115341|gb|ADT80643.1| ribosomal protein S3 [Euphydryas aurinia]
Length = 243
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 174/222 (78%), Positives = 188/222 (84%), Gaps = 1/222 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
GIKVKIML WDQ+GK GP P PD + + P E V + P +
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTS 225
>gi|389610621|dbj|BAM18922.1| ribosomal protein S3 [Papilio polytes]
Length = 244
Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/214 (80%), Positives = 186/214 (86%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
GIKVKIML WDQ+GK GP P PD + + K+E
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDE 217
>gi|16566719|gb|AAL26578.1|AF429976_1 ribosomal protein S3 [Spodoptera frugiperda]
Length = 243
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 174/222 (78%), Positives = 188/222 (84%), Gaps = 1/222 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPERSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
GIKVKIML WDQ+GK GP P PD + + P E V + P +
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTS 225
>gi|281353139|gb|EFB28723.1| hypothetical protein PANDA_003327 [Ailuropoda melanoleuca]
Length = 233
Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 178/216 (82%), Positives = 186/216 (86%), Gaps = 2/216 (0%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKVKIML
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 180
Query: 191 EWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 PWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 214
>gi|342356327|gb|AEL28822.1| ribosomal protein S3 [Heliconius melpomene cythera]
Length = 242
Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 175/224 (78%), Positives = 189/224 (84%), Gaps = 2/224 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
GIKVKIML WDQ+GK GP P PD + + K+E P+ TS
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDE--PVPSEPTS 225
>gi|62645168|ref|XP_575143.1| PREDICTED: 40S ribosomal protein S3-like [Rattus norvegicus]
gi|109470011|ref|XP_001057158.1| PREDICTED: 40S ribosomal protein S3-like [Rattus norvegicus]
Length = 243
Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 180/226 (79%), Positives = 191/226 (84%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYS VEVRVTP RTEIII TRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSRVEVRVTPTRTEIIILGTRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQK+F FPE SVELYAEKV GLCAIAQAESL YKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKQFVFPEGSVELYAEKVATGGLCAIAQAESLCYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGA+GCEV+VSGKLR QRAKS+KF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAEGCEVVVSGKLRGQRAKSVKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 224
>gi|442755587|gb|JAA69953.1| Putative 40s ribosomal protein s3 [Ixodes ricinus]
Length = 243
Score = 352 bits (904), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 177/216 (81%), Positives = 188/216 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF AELNE L RELAEDGYSGVEVRVTP TEIII ATRTQ+VLG
Sbjct: 1 MANPISKKRKFVADGVFKAELNEFLRRELAEDGYSGVEVRVTPQNTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE +VELYAEKV +RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPEGTVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P N+Y+++AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGIKVKIML D GK GP PLPD VTI K+E
Sbjct: 181 VLGIKVKIMLPCDPNGKLGPKKPLPDHVTIMEPKKE 216
>gi|264667327|gb|ACY71249.1| ribosomal protein S3 [Chrysomela tremula]
Length = 240
Score = 352 bits (904), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 173/217 (79%), Positives = 184/217 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATTISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EK RRIRELTSVVQKRF FPE SV LY EKV NRGLCAIAQAESLR+KL+GGLAVRRACY
Sbjct: 61 EKNRRIRELTSVVQKRFNFPEGSVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLR+IME GAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRYIMECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
VLGIKVKIML WD GK GP PLPD V + K+E+
Sbjct: 181 VLGIKVKIMLPWDATGKTGPKKPLPDNVAVAEPKDEI 217
>gi|44967154|gb|AAS49565.1| ribosomal protein S3 [Latimeria chalumnae]
Length = 211
Score = 352 bits (903), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 175/207 (84%), Positives = 183/207 (88%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKVKIML
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 180
Query: 191 EWDQKGKQGPTTPLPDLVTIHPLKEEV 217
WD GK GP PLPD V+I KEE+
Sbjct: 181 PWDPSGKIGPKKPLPDHVSIVEPKEEI 207
>gi|62083397|gb|AAX62423.1| ribosomal protein S3 [Lysiphlebus testaceipes]
Length = 234
Score = 352 bits (903), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 173/220 (78%), Positives = 190/220 (86%), Gaps = 1/220 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 8 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIILMATHTQSVLGEKGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF F + +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 68 RIRELTSVVQKRFGFKDGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P +Y+D+A RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTADYVDTATRHVLLRQGVLGI 187
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
KVKIML WDQ GK GP PLPD V++ P +E + + P++
Sbjct: 188 KVKIMLPWDQNGKTGPKKPLPDNVSVAEPKEENIPLMPSS 227
>gi|116090821|gb|ABJ55992.1| ribosomal protein S3 [Ostrinia nubilalis]
Length = 241
Score = 352 bits (903), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 172/214 (80%), Positives = 185/214 (86%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
GIKVKIML WDQ+GK GP P PD + + K+E
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDE 217
>gi|70906311|gb|AAZ14891.1| ribosomal protein S3 [Aedes albopictus]
Length = 243
Score = 352 bits (902), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 175/222 (78%), Positives = 188/222 (84%), Gaps = 1/222 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNAVSKKRRFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P NEY+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAP 221
VLGIKVKIML WD GK GP PLPD V+ + P E +Y P
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTP 222
>gi|157118129|ref|XP_001659022.1| 40S ribosomal protein S3 [Aedes aegypti]
gi|70906313|gb|AAZ14892.1| ribosomal protein S3 [Aedes aegypti]
gi|108875827|gb|EAT40052.1| AAEL008192-PA [Aedes aegypti]
Length = 243
Score = 352 bits (902), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 175/222 (78%), Positives = 188/222 (84%), Gaps = 1/222 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNAVSKKRRFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P NEY+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAP 221
VLGIKVKIML WD GK GP PLPD V+ + P E +Y P
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTP 222
>gi|170057463|ref|XP_001864493.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167876891|gb|EDS40274.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 250
Score = 352 bits (902), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 175/222 (78%), Positives = 188/222 (84%), Gaps = 1/222 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNVVSKKRRFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P NEY+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAP 221
VLGIKVKIML WD GK GP PLPD V+ + P E +Y P
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTP 222
>gi|452821888|gb|EME28913.1| 40S ribosomal protein S3e [Galdieria sulphuraria]
Length = 227
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 169/216 (78%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT +SKKR+ VADGVF AELNE L REL+E+GYSGVEV+ TP+RTEI+IRATRTQNVLG
Sbjct: 1 MATLMSKKRRAVADGVFKAELNEFLMRELSEEGYSGVEVKPTPLRTEIVIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF+FPE +VELYAEKV +RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFRFPEGTVELYAEKVADRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGC V VSG LRAQRAK+MKF DGYM+ SGQPV +Y+D+AVRHVL+RQG
Sbjct: 121 GVLRFVMESGAKGCVVTVSGLLRAQRAKTMKFTDGYMVHSGQPVKDYVDTAVRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGIKV IML +D +GK+GP+ PLPD V I+ KE+
Sbjct: 181 VLGIKVTIMLPYDPEGKKGPSKPLPDNVQIYEPKED 216
>gi|402244315|emb|CBW52775.1| 40S ribosomal protein S3 [Polytomella sp. Pringsheim 198.80]
Length = 225
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/212 (80%), Positives = 192/212 (90%), Gaps = 2/212 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QISK +KFV DGVF AELNE+LTRELAEDGYSGVEVR++PVRTEIIIRATRTQNVLGE+G
Sbjct: 15 QISKAKKFVRDGVFRAELNELLTRELAEDGYSGVEVRLSPVRTEIIIRATRTQNVLGEQG 74
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRFK ++V+L+AE+V+ RGLCAIAQAESLRYKLLGGLAVRRACYGVL
Sbjct: 75 RRIRELTSVIQKRFKI--DNVQLFAEEVSARGLCAIAQAESLRYKLLGGLAVRRACYGVL 132
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
R++MESGAKGCEVI+SGKLRAQRAKSMKFKDGYM+SSG YIDSAVRHVLLRQGVLG
Sbjct: 133 RYVMESGAKGCEVIISGKLRAQRAKSMKFKDGYMVSSGNSSRTYIDSAVRHVLLRQGVLG 192
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE 215
IKVKIM +WD G++GP TPLPD+V + KE
Sbjct: 193 IKVKIMKDWDPTGRRGPKTPLPDMVKVLDPKE 224
>gi|44968137|gb|AAS49584.1| ribosomal protein S3 [Gallus gallus]
Length = 211
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 175/207 (84%), Positives = 182/207 (87%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKVKI L
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKITL 180
Query: 191 EWDQKGKQGPTTPLPDLVTIHPLKEEV 217
WD GK GP PLPD V+I KEE+
Sbjct: 181 PWDPSGKIGPKKPLPDHVSIVVPKEEI 207
>gi|61654704|gb|AAX48878.1| S3 [Suberites domuncula]
Length = 246
Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 175/219 (79%), Positives = 187/219 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA Q SKKRKFVADG+F AELN L+REL+EDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQTSKKRKFVADGIFKAELNNFLSRELSEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FP+ +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPDGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLR QRAKSMKF DG+MI SG P EYIDSAV HV LRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRGQRAKSMKFVDGFMIHSGFPTKEYIDSAVTHVHLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV 219
VLGIKVKIML D GK GP PLPD V++ K++V V
Sbjct: 181 VLGIKVKIMLPHDPTGKSGPKKPLPDQVSVVEPKDDVRV 219
>gi|196012547|ref|XP_002116136.1| ribosomal protein S3e [Trichoplax adhaerens]
gi|190581459|gb|EDV21536.1| ribosomal protein S3e [Trichoplax adhaerens]
Length = 228
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 170/217 (78%), Positives = 186/217 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISKKRKFVADG+F AELN L+RELAEDGYSGVEVRVTP RTEIII ATRTQNVLGE
Sbjct: 3 AASISKKRKFVADGIFRAELNNFLSRELAEDGYSGVEVRVTPTRTEIIISATRTQNVLGE 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIREL S++QKRF FPE+SVE+YAEKV RGLCAIAQ ESLRYKL+GGLAVRRACYG
Sbjct: 63 KGRRIRELMSLIQKRFNFPEDSVEIYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCE++VSGKLR QRAKSMKF DG MI +GQP +Y+D+A+RHV LRQGV
Sbjct: 123 VLRFIMESGAKGCEIVVSGKLRGQRAKSMKFVDGLMIHTGQPCVDYVDTAIRHVYLRQGV 182
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVY 218
LGIKVKIML D GK GP PLPD V+I K EV+
Sbjct: 183 LGIKVKIMLPTDPTGKSGPKKPLPDYVSISEPKSEVF 219
>gi|44967199|gb|AAS49566.1| ribosomal protein S3 [Protopterus dolloi]
Length = 211
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 175/207 (84%), Positives = 182/207 (87%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG KGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGGKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEASVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKVKIML
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 180
Query: 191 EWDQKGKQGPTTPLPDLVTIHPLKEEV 217
WD GK GP PLPD V+I KEE+
Sbjct: 181 PWDPSGKIGPKKPLPDHVSIVEPKEEI 207
>gi|384497979|gb|EIE88470.1| 40S ribosomal protein S3 [Rhizopus delemar RA 99-880]
Length = 241
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 172/228 (75%), Positives = 195/228 (85%), Gaps = 3/228 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+A QISKKRKFVADGVF+AELNE LTRELAE GY+GVEVRVTP RTEIIIRAT TQNVLG
Sbjct: 4 VAAQISKKRKFVADGVFYAELNEFLTRELAEAGYAGVEVRVTPARTEIIIRATHTQNVLG 63
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPEN+VELYAE+V NRGLCAIAQ ES+++KLL GLAVRRACY
Sbjct: 64 EKGRRIRELTTLVQKRFKFPENAVELYAERVQNRGLCAIAQCESVKFKLLNGLAVRRACY 123
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+RF+MESGAKGCEV+VSGK+RA RAK+MKF DG+MI SG P E+I +AVRHV LRQG
Sbjct: 124 GVIRFVMESGAKGCEVVVSGKVRAARAKAMKFADGFMIHSGNPAREFITTAVRHVDLRQG 183
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIE 228
VLGIKVKIML+ D G+ GP LPD+VTI K+E AP T S +
Sbjct: 184 VLGIKVKIMLDNDPTGRNGPKQTLPDIVTILEPKDE---APITEPSAQ 228
>gi|332024589|gb|EGI64787.1| 40S ribosomal protein S3 [Acromyrmex echinatior]
Length = 242
Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 176/214 (82%), Positives = 186/214 (86%), Gaps = 1/214 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEPQNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIML WD GK GP PLPD V+I KEEV
Sbjct: 186 IKVKIMLPWDPNGKSGPKKPLPDYVSIVEPKEEV 219
>gi|332016343|gb|EGI57256.1| 40S ribosomal protein S3 [Acromyrmex echinatior]
Length = 242
Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 176/214 (82%), Positives = 186/214 (86%), Gaps = 1/214 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEPQNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIML WD GK GP PLPD V+I KEEV
Sbjct: 186 IKVKIMLPWDPNGKSGPKKPLPDYVSIVEPKEEV 219
>gi|307167583|gb|EFN61127.1| 40S ribosomal protein S3 [Camponotus floridanus]
Length = 242
Score = 349 bits (895), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 176/214 (82%), Positives = 186/214 (86%), Gaps = 1/214 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEPQNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIML WD GK GP PLPD V+I KEEV
Sbjct: 186 IKVKIMLPWDPNGKSGPKKPLPDYVSIVEPKEEV 219
>gi|209733334|gb|ACI67536.1| 40S ribosomal protein S3 [Salmo salar]
Length = 244
Score = 349 bits (895), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 179/226 (79%), Positives = 191/226 (84%), Gaps = 3/226 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF G MI SG PVN Y+D+A+ V +RQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVGGLMIHSGDPVNYYVDTAM-EVGIRQG 179
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I K+E P+T S
Sbjct: 180 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDETI--PSTPVS 223
>gi|345570572|gb|EGX53393.1| hypothetical protein AOL_s00006g259 [Arthrobotrys oligospora ATCC
24927]
Length = 270
Score = 349 bits (895), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 175/231 (75%), Positives = 191/231 (82%), Gaps = 1/231 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RK VADGVF+AELNE TRELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 5 TAISKRRKAVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGLCA+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 65 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLCAVAQCESLRYKLLNGLAVRRACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQGVL
Sbjct: 125 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVL 184
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSIELPVA 232
GIKVKIM D GK GP LPD VT I P +E+ +AP + PVA
Sbjct: 185 GIKVKIMRGSDPDGKAGPNKSLPDTVTIIEPKEEQPVLAPNSQDYTAKPVA 235
>gi|354501651|ref|XP_003512903.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 247
Score = 349 bits (895), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 176/216 (81%), Positives = 184/216 (85%), Gaps = 2/216 (0%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 15 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 74
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLC AQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 75 AVVQKRFGFPEGSVELYAEKVATRGLCGSAQAESLRYKLLGGLAVRRACYGVLRFIMESG 134
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKVKIML
Sbjct: 135 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 194
Query: 191 EWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
WD GK GP PLPD V+I K+E+ P T S
Sbjct: 195 PWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 228
>gi|322783274|gb|EFZ10858.1| hypothetical protein SINV_09070 [Solenopsis invicta]
Length = 257
Score = 348 bits (894), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 175/214 (81%), Positives = 186/214 (86%), Gaps = 1/214 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 21 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 80
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 81 RIRELTSVVQKRFNFKEPQNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 140
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQGVLG
Sbjct: 141 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 200
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIML WD GK GP PLPD V+I KEE+
Sbjct: 201 IKVKIMLPWDPNGKSGPKKPLPDYVSIVEPKEEI 234
>gi|426343098|ref|XP_004038155.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Gorilla gorilla
gorilla]
gi|426343100|ref|XP_004038156.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Gorilla gorilla
gorilla]
gi|426343102|ref|XP_004038157.1| PREDICTED: 40S ribosomal protein S3-like isoform 3 [Gorilla gorilla
gorilla]
gi|426343104|ref|XP_004038158.1| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Gorilla gorilla
gorilla]
gi|426343106|ref|XP_004038159.1| PREDICTED: 40S ribosomal protein S3-like isoform 5 [Gorilla gorilla
gorilla]
gi|426343108|ref|XP_004038160.1| PREDICTED: 40S ribosomal protein S3-like isoform 6 [Gorilla gorilla
gorilla]
gi|426343110|ref|XP_004038161.1| PREDICTED: 40S ribosomal protein S3-like isoform 7 [Gorilla gorilla
gorilla]
Length = 243
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/226 (77%), Positives = 188/226 (83%), Gaps = 2/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKR FV DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQN+ G
Sbjct: 1 MAVQISKKRMFVTDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNIPG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAIVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGC+V+ SGKLR QRAKSMK DG MI S P+N Y+ +AV HVLLRQG
Sbjct: 121 GVLRFIMESGAKGCKVVASGKLRGQRAKSMKSVDGLMIHSRDPINYYVGTAVCHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V++ LK+E+ P T S
Sbjct: 181 VLGIKVKIMLPWDPTGKTGPKKPLPDHVSVVELKDEIL--PTTPIS 224
>gi|269115422|gb|ACZ26288.1| putative ribosomal protein S3 [Mayetiola destructor]
Length = 250
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 175/224 (78%), Positives = 188/224 (83%), Gaps = 1/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFV +G+F AELNE LTR+LAEDGYSGVE+RVTP RTEIII AT+T NVLG
Sbjct: 1 MALPISKKRKFVLNGIFKAELNEFLTRQLAEDGYSGVEIRVTPTRTEIIIMATKTLNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N Y+DSA RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNAYVDSATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
VLGIKVKIML +D GK GP PLPD VT I P +E++Y P T
Sbjct: 181 VLGIKVKIMLPYDPNGKIGPKKPLPDNVTVIEPKEEQIYEQPET 224
>gi|340710430|ref|XP_003393793.1| PREDICTED: 40S ribosomal protein S3-like [Bombus terrestris]
Length = 242
Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 175/223 (78%), Positives = 191/223 (85%), Gaps = 3/223 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQNVLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQNVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEAQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
IKVKIML +D GK GP PLPD V+I K+EV+ P+ TS
Sbjct: 186 IKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVF--PSQPTS 226
>gi|302695173|ref|XP_003037265.1| 40S ribosomal protein S3 [Schizophyllum commune H4-8]
gi|300110962|gb|EFJ02363.1| hypothetical protein SCHCODRAFT_84144 [Schizophyllum commune H4-8]
Length = 266
Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 175/224 (78%), Positives = 191/224 (85%), Gaps = 1/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF AELN+ TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MAAQISKKRKFVADGVFRAELNDFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV +++D AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFVDFAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
VLGIKVKIM WD +G GP PLPD VTI P ++V P++
Sbjct: 181 VLGIKVKIMKGWDPEGLVGPKKPLPDNVTILEPPVDKVVGEPSS 224
>gi|50284382|emb|CAH04122.1| ribsomal protein S3e [Papilio dardanus]
Length = 220
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 169/214 (78%), Positives = 184/214 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCE +VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEAVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
GIKV+IML WD +GK GP P PD + + K+E
Sbjct: 184 GIKVEIMLPWDXQGKNGPKRPQPDHILVTEPKDE 217
>gi|28630191|gb|AAN77884.1| ribosomal protein S3 [Scyliorhinus canicula]
Length = 211
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 173/207 (83%), Positives = 181/207 (87%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTR LAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRGLAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGRVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKVKIML
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 180
Query: 191 EWDQKGKQGPTTPLPDLVTIHPLKEEV 217
WD GK GP PLPD V+I K+E+
Sbjct: 181 PWDPSGKIGPKKPLPDHVSIVEPKDEI 207
>gi|359492651|ref|XP_003634450.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-1-like
[Vitis vinifera]
Length = 246
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 175/216 (81%), Positives = 188/216 (87%), Gaps = 6/216 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M TQ+SKKRKF DGVFFA LNEVLTREL E+GYSG EVRVTP+ TEIIIRAT+T NVLG
Sbjct: 1 MVTQMSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG++I+ELTSVVQKRF+F ENSVEL AEKVNNRG AIAQAESLRYKLLGG CY
Sbjct: 61 EKGKKIKELTSVVQKRFEFLENSVELCAEKVNNRGFYAIAQAESLRYKLLGG-----XCY 115
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKL AQRAKSMKFKDGY+ISSGQPV +YID AVRHV LRQG
Sbjct: 116 GVLRFVMESGAKGCEVIVSGKLCAQRAKSMKFKDGYLISSGQPVKDYIDLAVRHV-LRQG 174
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGIKVKIM WD KGKQ TTPLPDLVTIHP K++
Sbjct: 175 VLGIKVKIMFNWDPKGKQSLTTPLPDLVTIHPNKQD 210
>gi|195053458|ref|XP_001993643.1| GH20000 [Drosophila grimshawi]
gi|193895513|gb|EDV94379.1| GH20000 [Drosophila grimshawi]
Length = 246
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 173/231 (74%), Positives = 190/231 (82%), Gaps = 1/231 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 3 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 63 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 122
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQG
Sbjct: 123 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSIELP 230
VLGIKVKIML +D K K GP PLPD V+ + P +E++Y P T I P
Sbjct: 183 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPP 233
>gi|195113493|ref|XP_002001302.1| GI22047 [Drosophila mojavensis]
gi|193917896|gb|EDW16763.1| GI22047 [Drosophila mojavensis]
Length = 246
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 173/231 (74%), Positives = 190/231 (82%), Gaps = 1/231 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 3 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 63 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 122
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQG
Sbjct: 123 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSIELP 230
VLGIKVKIML +D K K GP PLPD V+ + P +E++Y P T I P
Sbjct: 183 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPP 233
>gi|289743349|gb|ADD20422.1| ribosomal protein S3 [Glossina morsitans morsitans]
Length = 263
Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 173/228 (75%), Positives = 190/228 (83%), Gaps = 1/228 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ ISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 23 MSLTISKKRKFVADGMFKAELNEFLTRELAEDGYSGVEVRVTPARTEIIIMATKTQQVLG 82
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 83 EKGRRIRELTAMVQKRFNFEPGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 142
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQG
Sbjct: 143 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 202
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSI 227
VLGIKVKIML +D K K GP PLPD V+ + P +E++Y P T I
Sbjct: 203 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKI 250
>gi|296423595|ref|XP_002841339.1| 40S ribosomal protein S3 [Tuber melanosporum Mel28]
gi|295637576|emb|CAZ85530.1| unnamed protein product [Tuber melanosporum]
Length = 360
Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/216 (78%), Positives = 183/216 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE TRELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 88 ISKRRKFVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 147
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGLCA+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 148 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLCAVAQCESLRYKLLNGLAVRRACYGVLR 207
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGVLGI
Sbjct: 208 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDSATRHVLLRQGVLGI 267
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVA 220
KVKIM D GK GP LPD VT+ KEE +
Sbjct: 268 KVKIMRGSDPDGKSGPQKSLPDTVTVIEPKEEAPIG 303
>gi|195452576|ref|XP_002073414.1| GK14111 [Drosophila willistoni]
gi|194169499|gb|EDW84400.1| GK14111 [Drosophila willistoni]
Length = 244
Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 173/231 (74%), Positives = 190/231 (82%), Gaps = 1/231 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 1 MNLTISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 61 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSIELP 230
VLGIKVKIML +D K K GP PLPD V+ + P +E++Y P T I P
Sbjct: 181 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPP 231
>gi|323450925|gb|EGB06804.1| hypothetical protein AURANDRAFT_60177 [Aureococcus anophagefferens]
Length = 231
Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 174/228 (76%), Positives = 194/228 (85%), Gaps = 4/228 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADG+F+AELNE+LTRELAEDGY+GVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MAT-ISKKRKFVADGLFYAELNELLTRELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLG 59
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIRELTSVVQKRF F + +VELYAE+V NRGLCA AQAESL+YKLLGGLAVRRACY
Sbjct: 60 EKGQRIRELTSVVQKRFHFQDGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRACY 119
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+RF+MESGAKG EV+VSGKLRAQRAK+MKF DGYMI +G EY+DSAVRHVL+RQG
Sbjct: 120 GVVRFVMESGAKGVEVVVSGKLRAQRAKAMKFTDGYMIKTGHSKREYVDSAVRHVLMRQG 179
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIE 228
VLG+KV IML D GK GP L D+VTI KEE AP + E
Sbjct: 180 VLGVKVSIMLPHDASGKTGPKNTLADVVTILEPKEE---APMPVANFE 224
>gi|307207014|gb|EFN84837.1| 40S ribosomal protein S3 [Harpegnathos saltator]
Length = 242
Score = 345 bits (886), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 174/214 (81%), Positives = 186/214 (86%), Gaps = 1/214 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEPQNVELYAEKVAVRGLCAIAQAESLRYKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIML WD GK GP PLPD V+I K+E+
Sbjct: 186 IKVKIMLPWDPVGKTGPKKPLPDYVSIAEPKDEI 219
>gi|195390345|ref|XP_002053829.1| RpS3 [Drosophila virilis]
gi|194151915|gb|EDW67349.1| RpS3 [Drosophila virilis]
Length = 246
Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 172/228 (75%), Positives = 189/228 (82%), Gaps = 1/228 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 3 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 63 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 122
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQG
Sbjct: 123 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSI 227
VLGIKVKIML +D K K GP PLPD V+ + P +E++Y P T I
Sbjct: 183 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKI 230
>gi|18496083|emb|CAD12886.1| ribosomal protein S3 [Drosophila virilis]
Length = 244
Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 172/228 (75%), Positives = 189/228 (82%), Gaps = 1/228 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 1 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 61 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSI 227
VLGIKVKIML +D K K GP PLPD V+ + P +E++Y P T I
Sbjct: 181 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKI 228
>gi|383851993|ref|XP_003701515.1| PREDICTED: 40S ribosomal protein S3-like [Megachile rotundata]
Length = 242
Score = 345 bits (885), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 173/223 (77%), Positives = 192/223 (86%), Gaps = 3/223 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPEN-SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKETQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
IKVKIML +D +GK GP PLPD V+I K+E++ P+ TS
Sbjct: 186 IKVKIMLPYDPQGKTGPKKPLPDSVSIVEPKDEIF--PSQPTS 226
>gi|125772881|ref|XP_001357699.1| GA19858 [Drosophila pseudoobscura pseudoobscura]
gi|194745943|ref|XP_001955444.1| GF16244 [Drosophila ananassae]
gi|195158647|ref|XP_002020197.1| GL13632 [Drosophila persimilis]
gi|54637431|gb|EAL26833.1| GA19858 [Drosophila pseudoobscura pseudoobscura]
gi|190628481|gb|EDV44005.1| GF16244 [Drosophila ananassae]
gi|194116966|gb|EDW39009.1| GL13632 [Drosophila persimilis]
Length = 246
Score = 345 bits (885), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 172/227 (75%), Positives = 189/227 (83%), Gaps = 1/227 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 127 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSIELP 230
KVKIML +D K K GP PLPD V+ + P +E++Y P T I P
Sbjct: 187 KVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPP 233
>gi|28630189|gb|AAN77883.1| ribosomal protein S3 [Myxine glutinosa]
Length = 211
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 170/207 (82%), Positives = 181/207 (87%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADGVF AELNE LTRELAEDGYSGVE+RVTP RTE+II ATRTQNVLGE+GRRIRELT
Sbjct: 1 FVADGVFKAELNEFLTRELAEDGYSGVEIRVTPSRTEVIILATRTQNVLGEEGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
SV+QKRF FPE +VELYAEKV NRGLCAIAQ ESLRYKLLGGLAVRRACYGVLRFIME+G
Sbjct: 61 SVIQKRFDFPEGNVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMENG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D A+RHVLLRQGVLGIKVKIM
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDMAIRHVLLRQGVLGIKVKIMR 180
Query: 191 EWDQKGKQGPTTPLPDLVTIHPLKEEV 217
WD GK GP PLPD V++ KEEV
Sbjct: 181 PWDPSGKIGPKKPLPDHVSVVEPKEEV 207
>gi|340710439|ref|XP_003393797.1| PREDICTED: 40S ribosomal protein S3-like [Bombus terrestris]
Length = 242
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/223 (78%), Positives = 191/223 (85%), Gaps = 3/223 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEAQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
IKVKIML +D GK GP PLPD V+I K+EV+ P+ TS
Sbjct: 186 IKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVF--PSQPTS 226
>gi|66504343|ref|XP_623731.1| PREDICTED: 40S ribosomal protein S3 [Apis mellifera]
gi|380026164|ref|XP_003696828.1| PREDICTED: 40S ribosomal protein S3-like [Apis florea]
Length = 242
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/223 (78%), Positives = 191/223 (85%), Gaps = 3/223 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPEN-SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKETQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
IKVKIML +D GK GP PLPD V+I K+EV+ P+ TS
Sbjct: 186 IKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVF--PSQPTS 226
>gi|426202100|gb|EKV52023.1| hypothetical protein AGABI2DRAFT_239505 [Agaricus bisporus var.
bisporus H97]
Length = 265
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 172/224 (76%), Positives = 192/224 (85%), Gaps = 1/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV E++D AVRHVLL+QG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVREFVDYAVRHVLLKQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPAT 223
VLGIKVKIM D +G+ GP PLPD V I+ P ++V + P++
Sbjct: 181 VLGIKVKIMKGHDPEGQLGPKKPLPDAVQIYEPPVDKVVLEPSS 224
>gi|350427313|ref|XP_003494719.1| PREDICTED: 40S ribosomal protein S3-like [Bombus impatiens]
Length = 242
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/223 (78%), Positives = 191/223 (85%), Gaps = 3/223 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEAQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
IKVKIML +D GK GP PLPD V+I K+EV+ P+ TS
Sbjct: 186 IKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVF--PSQPTS 226
>gi|322709405|gb|EFZ00981.1| cytoplasmic ribosomal protein subunit S3 [Metarhizium anisopliae
ARSEF 23]
Length = 257
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 170/223 (76%), Positives = 188/223 (84%), Gaps = 1/223 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+ID+A RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDTATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
LGIKVKIM D GK GP+ LPD VTI P +E+V + P +
Sbjct: 185 LGIKVKIMRGSDPDGKAGPSKSLPDAVTIFEPKEEQVVLQPVS 227
>gi|340959617|gb|EGS20798.1| 40S ribosomal protein S3-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 254
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 171/218 (78%), Positives = 184/218 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISKKRKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKKRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+ID+A RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAREFIDTATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV 219
LGIKVKIM D GK GP LPD+VT+ KEE V
Sbjct: 185 LGIKVKIMRGSDPDGKSGPQKTLPDVVTVIEPKEETPV 222
>gi|389751372|gb|EIM92445.1| ribosomal protein S3 [Stereum hirsutum FP-91666 SS1]
Length = 267
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/224 (75%), Positives = 190/224 (84%), Gaps = 1/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNEFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL A+AQ ESLRYKLLGGLA+RRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAVAQCESLRYKLLGGLAIRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
VLGIKVKIM WD +G+ GP PLPD V I P +++ P++
Sbjct: 181 VLGIKVKIMKGWDPEGQLGPKKPLPDSVQILEPPVDKIVSEPSS 224
>gi|299755573|ref|XP_002912114.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130]
gi|298411286|gb|EFI28620.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130]
Length = 258
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/210 (80%), Positives = 185/210 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA+QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MASQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E++D AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALEFVDYAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
VLGIKVKIM +D++G+ GP PLPD V I
Sbjct: 181 VLGIKVKIMKGYDREGQLGPRKPLPDSVQI 210
>gi|422293192|gb|EKU20492.1| small subunit ribosomal protein S3e [Nannochloropsis gaditana
CCMP526]
Length = 243
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/231 (74%), Positives = 192/231 (83%), Gaps = 10/231 (4%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T ISKKRKF+ADGVF+AELNE+LTRELAEDGY+GVEVRV P+RTEIII ATRTQNVLG
Sbjct: 1 MTTNISKKRKFIADGVFYAELNELLTRELAEDGYAGVEVRVVPLRTEIIISATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIRELT+V+QKRF FP+ VEL+AEKV +RGLCA AQAESL+YKLLGGLAVRRACY
Sbjct: 61 EKGQRIRELTTVIQKRFNFPDGVVELFAEKVASRGLCAQAQAESLKYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+ME GAKG EVIVSGKLRAQRAKSMKF+DGYMI SGQ EY+D AVRHVL+RQG
Sbjct: 121 GVLRFVMEQGAKGAEVIVSGKLRAQRAKSMKFQDGYMIKSGQAKREYVDYAVRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELPV 231
VLG+KVKIML D GK GP L D+V + KEE IELPV
Sbjct: 181 VLGVKVKIMLPHDPAGKIGPKAKLSDVVNVLEPKEE----------IELPV 221
>gi|157118131|ref|XP_001659023.1| 40S ribosomal protein S3 [Aedes aegypti]
gi|403182936|gb|EJY57732.1| AAEL008192-PB [Aedes aegypti]
Length = 256
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/214 (79%), Positives = 183/214 (85%), Gaps = 1/214 (0%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
R+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRE
Sbjct: 22 RQFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRE 81
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
LT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIME
Sbjct: 82 LTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 141
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
SGAKGCEV+VSGKLR QRAKSMKF DG MI SG P NEY+D+A RHVLLRQGVLGIKVKI
Sbjct: 142 SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKI 201
Query: 189 MLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAP 221
ML WD GK GP PLPD V+ + P E +Y P
Sbjct: 202 MLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTP 235
>gi|340522228|gb|EGR52461.1| 40s ribosomal protein [Trichoderma reesei QM6a]
Length = 264
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/222 (75%), Positives = 186/222 (83%), Gaps = 1/222 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE+
Sbjct: 6 AQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGVL
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVL 185
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
GIKVKIM D +GK GP LPD VT I P +E+ + P +
Sbjct: 186 GIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKEEQAVLQPVS 227
>gi|393232568|gb|EJD40148.1| 40S ribosomal protein S3 [Auricularia delicata TFB-10046 SS5]
Length = 264
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/210 (78%), Positives = 186/210 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT T+ VLG
Sbjct: 1 MSGQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTREVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRIRELT+++QKRFKFPENS+ELYAEKV +RGL A+AQ ESLRYKLLGGLAVRRACY
Sbjct: 61 DKGRRIRELTALIQKRFKFPENSLELYAEKVMHRGLSAVAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++DSAVRHV+L+QG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSRDFVDSAVRHVMLKQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
VLGIKVKIM WD G+ GP PLPD+VTI
Sbjct: 181 VLGIKVKIMKGWDPTGETGPKKPLPDMVTI 210
>gi|367027792|ref|XP_003663180.1| hypothetical protein MYCTH_2315249 [Myceliophthora thermophila ATCC
42464]
gi|347010449|gb|AEO57935.1| hypothetical protein MYCTH_2315249 [Myceliophthora thermophila ATCC
42464]
Length = 260
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/218 (78%), Positives = 184/218 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV 219
LGIKVKIM D +GK GP LPD VTI KEE V
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKEEAPV 222
>gi|312380148|gb|EFR26232.1| hypothetical protein AND_07881 [Anopheles darlingi]
Length = 278
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/212 (81%), Positives = 181/212 (85%), Gaps = 1/212 (0%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 46 FVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELT 105
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
SVVQKRF F SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESG
Sbjct: 106 SVVQKRFGFAPGSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 165
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG P NEY+D+A RHVLLRQGVLGIKVKIML
Sbjct: 166 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIML 225
Query: 191 EWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAP 221
WD GK GP PLPD V+ + P E +Y P
Sbjct: 226 PWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTP 257
>gi|164429154|ref|XP_956174.2| 40S ribosomal protein S3 [Neurospora crassa OR74A]
gi|157072430|gb|EAA26938.2| cytoplasmic ribosomal protein subunit S3 [Neurospora crassa OR74A]
gi|336470035|gb|EGO58197.1| cytoplasmic ribosomal protein subunit S3 [Neurospora tetrasperma
FGSC 2508]
gi|350290273|gb|EGZ71487.1| cytoplasmic ribosomal protein subunit S3 [Neurospora tetrasperma
FGSC 2509]
Length = 262
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/215 (79%), Positives = 183/215 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
LGIKVKIM D +GK GP LPD VTI KEE
Sbjct: 185 LGIKVKIMRGSDPEGKSGPQKSLPDAVTIIEPKEE 219
>gi|402086493|gb|EJT81391.1| 40S ribosomal protein S3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 263
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/225 (76%), Positives = 188/225 (83%), Gaps = 4/225 (1%)
Query: 1 MAT---QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQN 57
MAT QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ
Sbjct: 1 MATPGAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQE 60
Query: 58 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
VLGE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 61 VLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRR 120
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLL 177
ACYGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLL
Sbjct: 121 ACYGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLL 180
Query: 178 RQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAP 221
RQGVLGIKVKIM D +GK GP LPD VTI P +E+ V P
Sbjct: 181 RQGVLGIKVKIMRGSDPEGKAGPQKSLPDAVTILEPKEEQPVVQP 225
>gi|407924047|gb|EKG17107.1| Ribosomal protein S3 [Macrophomina phaseolina MS6]
Length = 265
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 189/222 (85%), Gaps = 1/222 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 7 SQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 66
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV+NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 67 GRRIRELTSLIQKRFKFPENSVSLYAAKVSNRGLSAVAQCESLRYKLLNGLAVRRACYGV 126
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++ID+A RHVLLRQGVL
Sbjct: 127 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAHDFIDTATRHVLLRQGVL 186
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
GIKVKIM D +GK GP LPD VT I P +E+ V P +
Sbjct: 187 GIKVKIMRGSDPEGKAGPQKSLPDSVTIIEPKEEQPIVQPMS 228
>gi|171686174|ref|XP_001908028.1| hypothetical protein [Podospora anserina S mat+]
gi|170943048|emb|CAP68701.1| unnamed protein product [Podospora anserina S mat+]
Length = 262
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/218 (78%), Positives = 184/218 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV 219
LGIKVKIM D +GK GP LPD VTI KEE V
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKSLPDAVTIIDPKEETPV 222
>gi|340384078|ref|XP_003390542.1| PREDICTED: 40S ribosomal protein S3-like [Amphimedon queenslandica]
Length = 236
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/220 (77%), Positives = 184/220 (83%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+ +SKKRKFVADGVF AELN L++ELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEK
Sbjct: 2 STLSKKRKFVADGVFKAELNAFLSKELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACYGV
Sbjct: 62 GRRIRELTAVVQKRFSFPEGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGV 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGC VIVSGKLR QRAKSMKF DG MI +G P YID+AV HV LRQGVL
Sbjct: 122 LRFIMESGAKGCTVIVSGKLRGQRAKSMKFTDGLMIHAGNPTRHYIDNAVTHVHLRQGVL 181
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPA 222
GIKV+IML D GK GP PLPD V++ KEE + A A
Sbjct: 182 GIKVQIMLPHDPTGKMGPRKPLPDQVSVAEPKEETHYAEA 221
>gi|367049518|ref|XP_003655138.1| 40S ribosomal protein S3 [Thielavia terrestris NRRL 8126]
gi|347002402|gb|AEO68802.1| hypothetical protein THITE_2155431 [Thielavia terrestris NRRL 8126]
Length = 260
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 171/218 (78%), Positives = 184/218 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV 219
LGIKVKIM D +GK GP LPD VTI KEE V
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKEETPV 222
>gi|340379265|ref|XP_003388147.1| PREDICTED: 40S ribosomal protein S3-like [Amphimedon queenslandica]
Length = 236
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 171/220 (77%), Positives = 184/220 (83%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+ +SKKRKFVADGVF AELN L++ELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEK
Sbjct: 2 STLSKKRKFVADGVFKAELNAFLSKELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACYGV
Sbjct: 62 GRRIRELTAVVQKRFSFPEGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGV 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGC VIVSGKLR QRAKSMKF DG MI +G P YID+AV HV LRQGVL
Sbjct: 122 LRFIMESGAKGCTVIVSGKLRGQRAKSMKFTDGLMIHAGNPTRHYIDNAVTHVHLRQGVL 181
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPA 222
GIKV+IML D GK GP PLPD V++ KEE + A A
Sbjct: 182 GIKVQIMLPHDPTGKMGPRKPLPDQVSVAEPKEETHHAEA 221
>gi|380470676|emb|CCF47635.1| 40S ribosomal protein S3 [Colletotrichum higginsianum]
Length = 261
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 169/223 (75%), Positives = 187/223 (83%), Gaps = 1/223 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
LGIKVKIM D +GK GP LPD V++ P +E+ V P +
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVSVLEPKEEQTVVQPMS 227
>gi|195331295|ref|XP_002032338.1| GM26502 [Drosophila sechellia]
gi|195573126|ref|XP_002104546.1| GD21014 [Drosophila simulans]
gi|194121281|gb|EDW43324.1| GM26502 [Drosophila sechellia]
gi|194200473|gb|EDX14049.1| GD21014 [Drosophila simulans]
Length = 246
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 170/227 (74%), Positives = 190/227 (83%), Gaps = 1/227 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV +RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVASRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSIELP 230
KVK+ML +D K K GP PLPD V+ + P +E++Y P T I P
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPP 233
>gi|302406170|ref|XP_003000921.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102]
gi|261360179|gb|EEY22607.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102]
gi|346971436|gb|EGY14888.1| 40S ribosomal protein S3 [Verticillium dahliae VdLs.17]
Length = 262
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 170/223 (76%), Positives = 186/223 (83%), Gaps = 1/223 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
LGIKVKIM D +GK GP LPD VT I P +E+ V P +
Sbjct: 185 LGIKVKIMRGSDPEGKSGPQKSLPDAVTIIEPKEEQSVVQPMS 227
>gi|429856532|gb|ELA31437.1| 40s ribosomal protein s3 [Colletotrichum gloeosporioides Nara gc5]
Length = 259
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 170/223 (76%), Positives = 187/223 (83%), Gaps = 1/223 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
LGIKVKIM D +GK GP LPD V+I P +E+ V P +
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVSILEPKEEQSVVQPMS 227
>gi|310793027|gb|EFQ28488.1| ribosomal protein S3 [Glomerella graminicola M1.001]
Length = 261
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 169/223 (75%), Positives = 187/223 (83%), Gaps = 1/223 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
LGIKVKIM D +GK GP LPD V++ P +E+ V P +
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVSVLEPKEEQAVVQPMS 227
>gi|336268268|ref|XP_003348899.1| 40S ribosomal protein S3 [Sordaria macrospora k-hell]
gi|380094158|emb|CCC08375.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 262
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 170/215 (79%), Positives = 183/215 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
LGIKVKIM D +GK GP LPD VTI KEE
Sbjct: 185 LGIKVKIMRGSDPEGKSGPQKTLPDAVTIIEPKEE 219
>gi|402221674|gb|EJU01742.1| 40S ribosomal protein S3 [Dacryopinax sp. DJM-731 SS1]
Length = 259
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 169/209 (80%), Positives = 182/209 (87%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+T ISKKRKFVADGVF AEL E TRELAE+GYSG EVRVT RTEIIIRAT TQ VLGE
Sbjct: 11 STTISKKRKFVADGVFRAELGEFFTRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLGE 70
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKFPENS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRACYG
Sbjct: 71 KGRRIRELTALVQKRFKFPENSLELYAEKVQNRGLSAVAQCESLRYKLLGGLAVRRACYG 130
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRF+MES AKGCEVIVSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQGV
Sbjct: 131 VLRFVMESEAKGCEVIVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQGV 190
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
LGIKVKIM WD +G+ GP PLPD VTI
Sbjct: 191 LGIKVKIMKAWDPEGRLGPRKPLPDTVTI 219
>gi|328862650|gb|EGG11751.1| hypothetical protein MELLADRAFT_70763 [Melampsora larici-populina
98AG31]
Length = 269
Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 171/225 (76%), Positives = 190/225 (84%), Gaps = 1/225 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AEL+E TREL+E+GYSG EVRVT RTE+IIRAT TQ VLG+K
Sbjct: 2 TTISKRRKFVADGVFYAELSEFFTRELSEEGYSGCEVRVTHARTEVIIRATHTQEVLGQK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS+VQKRFKFPE SVELYAEKV RGLCA+AQ ESLRYKLLGGLAVRRACYGV
Sbjct: 62 GRRIRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGV 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMES AKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQGVL
Sbjct: 122 LRFIMESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPCVDFVDQAVRHVLLRQGVL 181
Query: 183 GIKVKIMLEWDQKGKQG-PTTPLPDLVTIHPLKEEVYVAPATATS 226
GIKVKIM D +G+ G P PLPDLVT+ KEEV V T+ +
Sbjct: 182 GIKVKIMRGSDTEGRNGAPAKPLPDLVTVFDPKEEVIVQQPTSEN 226
>gi|378725981|gb|EHY52440.1| 40S ribosomal protein S3 [Exophiala dermatitidis NIH/UT8656]
Length = 262
Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 173/219 (78%), Positives = 184/219 (84%), Gaps = 3/219 (1%)
Query: 1 MATQ---ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQN 57
M TQ ISKKRKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ
Sbjct: 1 MTTQPGAISKKRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQE 60
Query: 58 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
VLGE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 61 VLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRR 120
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLL 177
ACYGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP NE+ID A RHVLL
Sbjct: 121 ACYGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPANEFIDHATRHVLL 180
Query: 178 RQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
RQGVLGIKVKIM D +GK GP LPD VTI KEE
Sbjct: 181 RQGVLGIKVKIMRGSDPEGKAGPQKSLPDSVTIIDPKEE 219
>gi|390604317|gb|EIN13708.1| ribosomal protein S3 [Punctularia strigosozonata HHB-11173 SS5]
Length = 265
Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 169/224 (75%), Positives = 191/224 (85%), Gaps = 1/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M++QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSSQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENSVELYAEKV RGL AIAQ ESLRYKLLGGLAVRRA Y
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSVELYAEKVTYRGLSAIAQCESLRYKLLGGLAVRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV++SGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLL+QG
Sbjct: 121 GVLRFVMESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPSRDFVDYAVRHVLLKQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
VLGIKVKIM WD +G+ GP+ PLPD V I P +++ P++
Sbjct: 181 VLGIKVKIMKGWDPQGETGPSKPLPDSVQILEPPVDKIITEPSS 224
>gi|403173943|ref|XP_003332971.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170763|gb|EFP88552.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 265
Score = 343 bits (879), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 172/218 (78%), Positives = 187/218 (85%), Gaps = 1/218 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVFFAEL+E TRELAE+GYSG EVRVT RTE+IIRAT TQ VLG+K
Sbjct: 2 TTISKRRKFVADGVFFAELSEFFTRELAEEGYSGCEVRVTHARTEVIIRATHTQEVLGQK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS+VQKRFKFPE SVELYAEKV RGLCA+AQ ESLRYKLLGGLAVRRACYGV
Sbjct: 62 GRRIRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGV 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMES AKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQGVL
Sbjct: 122 LRFIMESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSVDFVDQAVRHVLLRQGVL 181
Query: 183 GIKVKIMLEWDQKGKQG-PTTPLPDLVTIHPLKEEVYV 219
GIKVKIM D +G+ G P PLPD+VTI KEEV V
Sbjct: 182 GIKVKIMRGNDTEGRGGAPPKPLPDMVTIFEPKEEVIV 219
>gi|195502880|ref|XP_002098418.1| RpS3 [Drosophila yakuba]
gi|194184519|gb|EDW98130.1| RpS3 [Drosophila yakuba]
Length = 246
Score = 343 bits (879), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 170/227 (74%), Positives = 189/227 (83%), Gaps = 1/227 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSIELP 230
KVK+ML +D K K GP PLPD V+ + P +E++Y P T I P
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPP 233
>gi|302904072|ref|XP_003048997.1| 40S ribosomal protein S3 [Nectria haematococca mpVI 77-13-4]
gi|256729931|gb|EEU43284.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 260
Score = 342 bits (878), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 169/223 (75%), Positives = 187/223 (83%), Gaps = 1/223 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GSQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
LGIKVKIM D +GK GP LPD VT I P +E+ + P +
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQAVLQPVS 227
>gi|291389681|ref|XP_002711316.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus]
Length = 286
Score = 342 bits (878), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 175/221 (79%), Positives = 186/221 (84%), Gaps = 2/221 (0%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRR
Sbjct: 49 SKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRR 108
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELT VVQ RF FPE SVELYAEKV RGLCAIAQAESLRY+LLGGLAVRRACYGVLRF
Sbjct: 109 IRELTVVVQTRFGFPEGSVELYAEKVAMRGLCAIAQAESLRYQLLGGLAVRRACYGVLRF 168
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEV+VSGKLR QRA+SMKF G +I SG PVN Y D+AVRHVLLRQGVLGIK
Sbjct: 169 IMESGAKGCEVVVSGKLRGQRAQSMKFVGGLVIHSGDPVNYYSDTAVRHVLLRQGVLGIK 228
Query: 186 VKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VK+ML WD K GP PLPD V++ K+E+ P T S
Sbjct: 229 VKLMLPWDPSRKIGPKKPLPDHVSMVEPKDEIL--PTTPIS 267
>gi|116207712|ref|XP_001229665.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51]
gi|88183746|gb|EAQ91214.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51]
Length = 260
Score = 342 bits (878), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 170/218 (77%), Positives = 184/218 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV 219
LGIKVKIM D +GK GP LPD VTI K+E V
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKDEAPV 222
>gi|388853822|emb|CCF52543.1| probable 40S ribosomal protein S3 [Ustilago hordei]
Length = 258
Score = 342 bits (878), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 168/229 (73%), Positives = 190/229 (82%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKFPENS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRA YG
Sbjct: 63 KGRRIRELTALVQKRFKFPENSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRF+MESGAKGCEV++SGKLRA RAKSMKF DG+MI SGQPV +++D AVRHVL++QGV
Sbjct: 123 VLRFVMESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPVKDFVDEAVRHVLMKQGV 182
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELP 230
LGIKVKIM WD +G+ G PLPD VTI KEE + + S + P
Sbjct: 183 LGIKVKIMQGWDPEGRAGKPFPLPDAVTILEPKEEAPILAPVSESRQAP 231
>gi|242785057|ref|XP_002480514.1| 40S ribosomal protein S3 [Talaromyces stipitatus ATCC 10500]
gi|218720661|gb|EED20080.1| 40S ribosomal protein S3, putative [Talaromyces stipitatus ATCC
10500]
Length = 266
Score = 342 bits (878), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 172/217 (79%), Positives = 184/217 (84%), Gaps = 2/217 (0%)
Query: 2 ATQ--ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
ATQ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VL
Sbjct: 3 ATQGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVL 62
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRAC
Sbjct: 63 GEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRAC 122
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQ
Sbjct: 123 YGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
GVLGIKVKIM D +GK GP LPD VTI KEE
Sbjct: 183 GVLGIKVKIMRGSDPEGKSGPQKTLPDAVTIIEPKEE 219
>gi|17136324|ref|NP_476632.1| ribosomal protein S3 [Drosophila melanogaster]
gi|548856|sp|Q06559.1|RS3_DROME RecName: Full=40S ribosomal protein S3
gi|290275|gb|AAA28875.1| ribosomal protein S3/AP endonuclease DNA repair protein [Drosophila
melanogaster]
gi|7300992|gb|AAF56129.1| ribosomal protein S3 [Drosophila melanogaster]
gi|21430306|gb|AAM50831.1| LD47488p [Drosophila melanogaster]
gi|220950134|gb|ACL87610.1| RpS3-PA [synthetic construct]
gi|220959146|gb|ACL92116.1| RpS3-PA [synthetic construct]
gi|346426335|gb|AEO27696.1| RpS3-PA [Drosophila melanogaster]
Length = 246
Score = 342 bits (878), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 170/227 (74%), Positives = 189/227 (83%), Gaps = 1/227 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSIELP 230
KVK+ML +D K K GP PLPD V+ + P +E++Y P T I P
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPP 233
>gi|145254885|ref|XP_001398791.1| 40S ribosomal protein S3 [Aspergillus niger CBS 513.88]
gi|134084376|emb|CAK48715.1| unnamed protein product [Aspergillus niger]
gi|350630615|gb|EHA18987.1| hypothetical protein ASPNIDRAFT_202416 [Aspergillus niger ATCC
1015]
gi|358366728|dbj|GAA83348.1| 40S ribosomal protein S3 [Aspergillus kawachii IFO 4308]
Length = 266
Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 169/212 (79%), Positives = 181/212 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D +GK GP LPD VTI KEE
Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEE 219
>gi|393218435|gb|EJD03923.1| ribosomal protein S3 [Fomitiporia mediterranea MF3/22]
Length = 264
Score = 342 bits (877), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 168/224 (75%), Positives = 189/224 (84%), Gaps = 1/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA+QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MASQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL A+AQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAVAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP +++D A RHVLL+QG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMVHSGQPARDFVDYAYRHVLLKQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
VLGIKVKIM WD +G+ GP PLPD V I P +++ P +
Sbjct: 181 VLGIKVKIMKGWDPEGQIGPKKPLPDSVQILDPPIDKIVAEPTS 224
>gi|85857570|gb|ABC86320.1| IP15838p [Drosophila melanogaster]
Length = 253
Score = 342 bits (877), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 170/227 (74%), Positives = 189/227 (83%), Gaps = 1/227 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 14 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 73
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 74 RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLR 133
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 134 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 193
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSIELP 230
KVK+ML +D K K GP PLPD V+ + P +E++Y P T I P
Sbjct: 194 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPP 240
>gi|194910452|ref|XP_001982149.1| GG11202 [Drosophila erecta]
gi|190656787|gb|EDV54019.1| GG11202 [Drosophila erecta]
Length = 246
Score = 342 bits (877), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 169/227 (74%), Positives = 189/227 (83%), Gaps = 1/227 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RG+CAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGICAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSIELP 230
KVK+ML +D K K GP PLPD V+ + P +E++Y P T I P
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPP 233
>gi|392588527|gb|EIW77859.1| 40S ribosomal protein S3 [Coniophora puteana RWD-64-598 SS2]
Length = 267
Score = 342 bits (877), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 171/236 (72%), Positives = 196/236 (83%), Gaps = 4/236 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE REL+E+GYSG +VRVT RTEIIIRA+ TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNEFFARELSEEGYSGCDVRVTHARTEIIIRASMTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPEN++ELYAEKV +RGL A+AQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENALELYAEKVQHRGLSAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
G+LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQG
Sbjct: 121 GILRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSKDFVDYAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPATATS---IELPVA 232
VLGIKVKIM WD +G GP PLPD V I P ++V + P++ + + PVA
Sbjct: 181 VLGIKVKIMKGWDPEGVLGPRKPLPDSVQILEPPVDKVVLEPSSESKEPFVAAPVA 236
>gi|358383594|gb|EHK21258.1| hypothetical protein TRIVIDRAFT_78477 [Trichoderma virens Gv29-8]
Length = 263
Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 168/214 (78%), Positives = 182/214 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE+
Sbjct: 6 AQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGVL
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVL 185
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
GIKVKIM D +GK GP LPD VTI KEE
Sbjct: 186 GIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKEE 219
>gi|212527956|ref|XP_002144135.1| 40S ribosomal protein S3 [Talaromyces marneffei ATCC 18224]
gi|210073533|gb|EEA27620.1| 40S ribosomal protein S3, putative [Talaromyces marneffei ATCC
18224]
Length = 266
Score = 342 bits (876), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 172/217 (79%), Positives = 184/217 (84%), Gaps = 2/217 (0%)
Query: 2 ATQ--ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
ATQ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VL
Sbjct: 3 ATQGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVL 62
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRAC
Sbjct: 63 GEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRAC 122
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQ
Sbjct: 123 YGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
GVLGIKVKIM D +GK GP LPD VTI KEE
Sbjct: 183 GVLGIKVKIMRGSDPEGKSGPQKTLPDAVTIIEPKEE 219
>gi|261197469|ref|XP_002625137.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081]
gi|239595767|gb|EEQ78348.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081]
gi|239606762|gb|EEQ83749.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis ER-3]
gi|327351227|gb|EGE80084.1| hypothetical protein BDDG_03025 [Ajellomyces dermatitidis ATCC
18188]
Length = 270
Score = 342 bits (876), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 169/212 (79%), Positives = 182/212 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D +GK GP LPD VTI KEE
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 219
>gi|403178905|ref|XP_003337266.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164530|gb|EFP92847.2| small subunit ribosomal protein S3e [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 341
Score = 342 bits (876), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 171/218 (78%), Positives = 187/218 (85%), Gaps = 1/218 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AEL+E TRELAE+GYSG EVRVT RTE+IIRAT TQ VLG+K
Sbjct: 78 TTISKRRKFVADGVFYAELSEFFTRELAEEGYSGCEVRVTHARTEVIIRATHTQEVLGQK 137
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS+VQKRFKFPE SVELYAEKV RGLCA+AQ ESLRYKLLGGLAVRRACYGV
Sbjct: 138 GRRIRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGV 197
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMES AKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQGVL
Sbjct: 198 LRFIMESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSVDFVDQAVRHVLLRQGVL 257
Query: 183 GIKVKIMLEWDQKGKQG-PTTPLPDLVTIHPLKEEVYV 219
GIKVKIM D +G+ G P PLPD+VTI KEEV V
Sbjct: 258 GIKVKIMRGNDTEGRGGAPPKPLPDMVTIFEPKEEVIV 295
>gi|148684446|gb|EDL16393.1| ribosomal protein S3, isoform CRA_h [Mus musculus]
Length = 223
Score = 342 bits (876), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 173/206 (83%), Positives = 184/206 (89%), Gaps = 1/206 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPD 206
VLGIKVKI++ + K + PTTP+ +
Sbjct: 181 VLGIKVKIII-VEPKDEILPTTPISE 205
>gi|358397895|gb|EHK47263.1| hypothetical protein TRIATDRAFT_298935 [Trichoderma atroviride IMI
206040]
Length = 264
Score = 342 bits (876), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 169/218 (77%), Positives = 183/218 (83%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV 219
LGIKVKIM D +GK GP LPD VTI KEE V
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKEEAAV 222
>gi|170095049|ref|XP_001878745.1| 40S ribosomal protein S3 [Laccaria bicolor S238N-H82]
gi|164646049|gb|EDR10295.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 262
Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/210 (80%), Positives = 182/210 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M++QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSSQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
VLGIKVKIM D G+ GP PLPD V I
Sbjct: 181 VLGIKVKIMKGSDPDGQTGPRKPLPDSVQI 210
>gi|70990926|ref|XP_750312.1| 40S ribosomal protein S3 [Aspergillus fumigatus Af293]
gi|119496667|ref|XP_001265107.1| 40S ribosomal protein S3 [Neosartorya fischeri NRRL 181]
gi|66847944|gb|EAL88274.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus Af293]
gi|119413269|gb|EAW23210.1| 40S ribosomal protein S3, putative [Neosartorya fischeri NRRL 181]
gi|159130785|gb|EDP55898.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus A1163]
Length = 266
Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/212 (79%), Positives = 181/212 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D +GK GP LPD VTI KEE
Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEE 219
>gi|121702671|ref|XP_001269600.1| 40S ribosomal protein S3 [Aspergillus clavatus NRRL 1]
gi|119397743|gb|EAW08174.1| 40S ribosomal protein S3, putative [Aspergillus clavatus NRRL 1]
Length = 267
Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/212 (79%), Positives = 181/212 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D +GK GP LPD VTI KEE
Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEE 219
>gi|440639340|gb|ELR09259.1| small subunit ribosomal protein S3e [Geomyces destructans 20631-21]
Length = 262
Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/220 (76%), Positives = 185/220 (84%), Gaps = 1/220 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKF+ADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 10 ISKRRKFIADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 69
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 70 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 129
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGVLGI
Sbjct: 130 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 189
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
KVKIM D +GK GPT LPD VT I P E+ V P +
Sbjct: 190 KVKIMRGSDPEGKAGPTKSLPDSVTIIEPKNEDPVVQPMS 229
>gi|169764753|ref|XP_001816848.1| 40S ribosomal protein S3 [Aspergillus oryzae RIB40]
gi|238503978|ref|XP_002383221.1| 40S ribosomal protein S3 [Aspergillus flavus NRRL3357]
gi|83764702|dbj|BAE54846.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220690692|gb|EED47041.1| 40S ribosomal protein S3, putative [Aspergillus flavus NRRL3357]
gi|391863281|gb|EIT72592.1| 40S ribosomal protein [Aspergillus oryzae 3.042]
Length = 266
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/212 (79%), Positives = 181/212 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D +GK GP LPD VTI KEE
Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEE 219
>gi|346319548|gb|EGX89149.1| cytoplasmic ribosomal protein subunit S3 [Cordyceps militaris CM01]
Length = 258
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/215 (78%), Positives = 183/215 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMES AKGCEV+VSGKLRA RAKSMKF DG+MI SGQP N++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESDAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPKNDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
LGIKVKIM D +GK GP LPD VTI KEE
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVTIIDPKEE 219
>gi|293333308|ref|NP_001169131.1| uncharacterized protein LOC100382976 [Zea mays]
gi|223975097|gb|ACN31736.1| unknown [Zea mays]
Length = 266
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 172/217 (79%), Positives = 183/217 (84%), Gaps = 2/217 (0%)
Query: 2 ATQ--ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
ATQ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VL
Sbjct: 3 ATQGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVL 62
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GE GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRAC
Sbjct: 63 GENGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRAC 122
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQ
Sbjct: 123 YGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
GVLGIKVKIM D +GK GP LPD VTI KEE
Sbjct: 183 GVLGIKVKIMRGSDPEGKSGPQKTLPDAVTIIEPKEE 219
>gi|295670700|ref|XP_002795897.1| 40S ribosomal protein S3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284030|gb|EEH39596.1| 40S ribosomal protein S3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 270
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 170/218 (77%), Positives = 185/218 (84%), Gaps = 1/218 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAP 221
KVKIM D +GK GP LPD VT I P +EE + P
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPDSVTIIDPKEEEPVLHP 225
>gi|451847106|gb|EMD60414.1| hypothetical protein COCSADRAFT_40058 [Cochliobolus sativus ND90Pr]
Length = 265
Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 186/222 (83%), Gaps = 1/222 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 TAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGVL
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVL 185
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
GIKVKIM D +GK GP+ LPD VT I P +E+ V P +
Sbjct: 186 GIKVKIMRGSDPEGKAGPSKSLPDAVTIIEPKEEQPVVQPMS 227
>gi|226289773|gb|EEH45257.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb18]
Length = 270
Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 170/218 (77%), Positives = 185/218 (84%), Gaps = 1/218 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAP 221
KVKIM D +GK GP LPD VT I P +EE + P
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPDSVTIIDPKEEEPVLHP 225
>gi|408397169|gb|EKJ76319.1| hypothetical protein FPSE_03574 [Fusarium pseudograminearum CS3096]
Length = 260
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/223 (75%), Positives = 186/223 (83%), Gaps = 1/223 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GSQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
LGIKVKIM D +GK GP LPD VT I P +E+ + P +
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQAVLQPVS 227
>gi|320592132|gb|EFX04571.1| 40S ribosomal protein s3 [Grosmannia clavigera kw1407]
Length = 264
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/213 (79%), Positives = 181/213 (84%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 7 QISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVL
Sbjct: 67 RRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVL 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGVLG
Sbjct: 127 RFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLG 186
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
IKVKIM D GK GP LPD VTI KEE
Sbjct: 187 IKVKIMRGSDPDGKAGPQKTLPDAVTIIEPKEE 219
>gi|242218874|ref|XP_002475223.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
gi|220725609|gb|EED79589.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
Length = 262
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/224 (75%), Positives = 189/224 (84%), Gaps = 1/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELN+ TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNDFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHV+LRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
VLGIKVKIM WD +G+ GP PLPD V I P +++ P +
Sbjct: 181 VLGIKVKIMKGWDPEGQVGPRKPLPDSVQILEPPLDKIVAEPTS 224
>gi|361124160|gb|EHK96273.1| putative 40S ribosomal protein S3 [Glarea lozoyensis 74030]
Length = 263
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/223 (75%), Positives = 185/223 (82%), Gaps = 1/223 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 7 GTAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 66
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 67 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 126
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGV
Sbjct: 127 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGV 186
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
LGIKVKIM D +GK GP LPD VT I P +E+ V P +
Sbjct: 187 LGIKVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQSVVQPMS 229
>gi|325183864|emb|CCA18322.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14]
gi|325183947|emb|CCA18405.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14]
Length = 246
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/224 (76%), Positives = 191/224 (85%), Gaps = 3/224 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVF+AELNE+L REL DGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATNISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPLRTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIRELTSVVQKRF F E SVELYAE++ NRGLC+ AQAESL+Y+LL GLAVRRACY
Sbjct: 61 EKGQRIRELTSVVQKRFNFAEGSVELYAERIANRGLCSQAQAESLKYRLLEGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
VLRF+ME+GAKGCEVIVSGKLRAQRAKSMKFK+GYM+ +G EY+D+AVRHVL+RQG
Sbjct: 121 SVLRFVMEAGAKGCEVIVSGKLRAQRAKSMKFKEGYMVKTGNARQEYVDTAVRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE---VYVAP 221
VLG+KV IML D GKQGP L D+VTI KE+ VY AP
Sbjct: 181 VLGVKVSIMLPHDPTGKQGPKRNLDDVVTILEPKEDIPLVYPAP 224
>gi|449017871|dbj|BAM81273.1| 40S ribosomal protein S3 [Cyanidioschyzon merolae strain 10D]
Length = 262
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 189/222 (85%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+S KRKFVADGVFFAEL+E+LTRELAEDGY+GVEVRVTP E+IIRATRTQ VLGEKG
Sbjct: 7 QVSWKRKFVADGVFFAELSELLTRELAEDGYAGVEVRVTPRGHEVIIRATRTQTVLGEKG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V+KRF FPEN V L+ E+V NRGLCA+AQAESLRYKLLGGLAVRRA YGVL
Sbjct: 67 RRIRELTALVEKRFGFPENQVSLFVERVPNRGLCAMAQAESLRYKLLGGLAVRRAAYGVL 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RF+MESGAKGCEV +SGKLRAQRAK+MKF DGYMIS+GQP ++ID AVRHVLLRQGVLG
Sbjct: 127 RFVMESGAKGCEVQISGKLRAQRAKTMKFMDGYMISTGQPKLDFIDRAVRHVLLRQGVLG 186
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATAT 225
IKVKIML D G+QGP PLPD + I KEE + AT
Sbjct: 187 IKVKIMLPHDPTGRQGPRKPLPDSIVILEPKEEDTLGKVVAT 228
>gi|342874800|gb|EGU76719.1| hypothetical protein FOXB_12740 [Fusarium oxysporum Fo5176]
Length = 260
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/223 (75%), Positives = 186/223 (83%), Gaps = 1/223 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GSQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
LGIKVKIM D +GK GP LPD VT I P +E+ + P +
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQAVLQPVS 227
>gi|414887550|tpg|DAA63564.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
Length = 198
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 167/175 (95%), Positives = 170/175 (97%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEKGR
Sbjct: 7 ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF FPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR
Sbjct: 67 RIRELTSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
F+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG PVN YIDSAVRHVLLRQ
Sbjct: 127 FVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQ 181
>gi|240281578|gb|EER45081.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H143]
Length = 1054
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/215 (79%), Positives = 183/215 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 788 AGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 847
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 848 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 907
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQGV
Sbjct: 908 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGV 967
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
LGIKVKIM D +GK GP LPD VTI KEE
Sbjct: 968 LGIKVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 1002
>gi|225556722|gb|EEH05010.1| 40S ribosomal protein S3 [Ajellomyces capsulatus G186AR]
Length = 271
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/212 (79%), Positives = 182/212 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D +GK GP LPD VTI KEE
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 219
>gi|451997970|gb|EMD90435.1| hypothetical protein COCHEDRAFT_1157448 [Cochliobolus
heterostrophus C5]
Length = 265
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 186/222 (83%), Gaps = 1/222 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 TAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGVL
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVL 185
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
GIKVKIM D +GK GP+ LPD VT I P +E+ V P +
Sbjct: 186 GIKVKIMRGSDPEGKAGPSKSLPDSVTIIEPKEEQPVVQPMS 227
>gi|425768995|gb|EKV07505.1| hypothetical protein PDIP_73820 [Penicillium digitatum Pd1]
gi|425770579|gb|EKV09048.1| hypothetical protein PDIG_64480 [Penicillium digitatum PHI26]
Length = 264
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/212 (79%), Positives = 181/212 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D +GK GP LPD VTI KEE
Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEE 219
>gi|298714483|emb|CBJ27505.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 222
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 164/213 (76%), Positives = 190/213 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRKFVADGVF+AELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+
Sbjct: 1 MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQ 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF FP+++VELYAE+V RGLCA QAESL+YKLLGGLAVRRACYGVLR
Sbjct: 61 RIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLR 120
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKG EVIV+GKLRAQRAK+MKF+DGYMI SG+ +Y+D AVRHV++RQGVLG+
Sbjct: 121 FIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGV 180
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
V IML D GK+GP TPL D++TI P KEE+
Sbjct: 181 TVSIMLPHDPTGKEGPKTPLSDVITILPPKEEI 213
>gi|255942573|ref|XP_002562055.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586788|emb|CAP94435.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 264
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 168/212 (79%), Positives = 181/212 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D +GK GP LPD VTI KEE
Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEE 219
>gi|189188112|ref|XP_001930395.1| 40S ribosomal protein S3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330936377|ref|XP_003305367.1| 40S ribosomal protein S3 [Pyrenophora teres f. teres 0-1]
gi|187972001|gb|EDU39500.1| 40S ribosomal protein S3-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311317666|gb|EFQ86553.1| hypothetical protein PTT_18182 [Pyrenophora teres f. teres 0-1]
Length = 266
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 186/222 (83%), Gaps = 1/222 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 TAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGVL
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVL 185
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
GIKVKIM D +GK GP+ LPD VT I P +E+ V P +
Sbjct: 186 GIKVKIMRGSDPEGKAGPSKSLPDSVTIIEPKEEQPVVQPMS 227
>gi|325087729|gb|EGC41039.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H88]
Length = 1089
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/215 (79%), Positives = 183/215 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 823 AGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 882
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 883 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 942
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQGV
Sbjct: 943 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGV 1002
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
LGIKVKIM D +GK GP LPD VTI KEE
Sbjct: 1003 LGIKVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 1037
>gi|349803955|gb|AEQ17450.1| putative ribosomal protein s3 [Hymenochirus curtipes]
Length = 235
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/226 (77%), Positives = 184/226 (81%), Gaps = 13/226 (5%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQ LAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQ-----------LAVRRACY 109
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAK+MKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 110 GVLRFIMESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 169
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML WD GK GP PLPD V+I KEE+ P T S
Sbjct: 170 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEIL--PTTPIS 213
>gi|119187711|ref|XP_001244462.1| 40S ribosomal protein S3 [Coccidioides immitis RS]
gi|303316826|ref|XP_003068415.1| 40S ribosomal protein S3 [Coccidioides posadasii C735 delta SOWgp]
gi|240108096|gb|EER26270.1| 40S ribosomal protein S3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320038258|gb|EFW20194.1| 40S ribosomal protein S3 [Coccidioides posadasii str. Silveira]
gi|392871183|gb|EAS33062.2| 40S ribosomal protein [Coccidioides immitis RS]
Length = 263
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 168/212 (79%), Positives = 181/212 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D +GK GP LPD VTI KEE
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 219
>gi|389625837|ref|XP_003710572.1| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15]
gi|351650101|gb|EHA57960.1| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15]
gi|440467710|gb|ELQ36909.1| 40S ribosomal protein S3 [Magnaporthe oryzae Y34]
gi|440480625|gb|ELQ61280.1| 40S ribosomal protein S3 [Magnaporthe oryzae P131]
Length = 262
Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 169/223 (75%), Positives = 186/223 (83%), Gaps = 1/223 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 6 AAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 65
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFP +SV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 66 QGRRIRELTSLIQKRFKFPADSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 125
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGV
Sbjct: 126 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 185
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
LGIKVKIM D +GK GP LPD VTI P +E+ V P +
Sbjct: 186 LGIKVKIMRGSDPEGKAGPQKSLPDAVTILEPKEEQPVVQPVS 228
>gi|343429784|emb|CBQ73356.1| probable 40S ribosomal protein S3 [Sporisorium reilianum SRZ2]
Length = 252
Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 167/225 (74%), Positives = 190/225 (84%), Gaps = 1/225 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKFP+NS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRA YG
Sbjct: 63 KGRRIRELTALVQKRFKFPDNSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRF+MESGAKGCEV++SGKLRA RAKSMKF DG+MI SGQPV +++D AVRHVL++QGV
Sbjct: 123 VLRFVMESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPVKDFVDEAVRHVLMKQGV 182
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV-APATAT 225
LGIKVKIM WD +G+ G PLPD VTI KEE + AP + +
Sbjct: 183 LGIKVKIMQGWDPEGRAGKPFPLPDAVTILEPKEEAPILAPVSES 227
>gi|258576671|ref|XP_002542517.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704]
gi|237902783|gb|EEP77184.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704]
Length = 263
Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 168/212 (79%), Positives = 181/212 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D +GK GP LPD VTI KEE
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 219
>gi|400595104|gb|EJP62914.1| cytoplasmic ribosomal protein subunit S3 [Beauveria bassiana ARSEF
2860]
Length = 257
Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 168/215 (78%), Positives = 183/215 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMES AKGCEV+VSGKLRA RAKSMKF DG+MI SGQP N++ID+A RHVLLRQGV
Sbjct: 125 VLRFIMESDAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPKNDFIDTATRHVLLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
LGIKVKIM D +GK GP LPD VTI KEE
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVTIIDPKEE 219
>gi|357016985|gb|AET50521.1| hypothetical protein [Eimeria tenella]
Length = 233
Score = 340 bits (871), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 189/218 (86%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISKKRKFV DGVF AELNE L+R LAEDGYSGVEVRVTP+RTEIIIRATRT+ VLGEK
Sbjct: 5 TNISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGEK 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS+VQKRF FP +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGV
Sbjct: 65 GRRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LR IMESGAKGCEV+VSGKLRAQRAKSMKF+DGY+IS+G+P ++ A+R V LRQGVL
Sbjct: 125 LRHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQGVL 184
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVA 220
G++V IML +D +GK GP+TPLPD + + K E+ VA
Sbjct: 185 GVRVSIMLPFDPEGKMGPSTPLPDTIIVSEPKPELPVA 222
>gi|443898722|dbj|GAC76056.1| phosphatidylserine decarboxylase [Pseudozyma antarctica T-34]
Length = 252
Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 167/225 (74%), Positives = 190/225 (84%), Gaps = 1/225 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKFP+NS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRA YG
Sbjct: 63 KGRRIRELTALVQKRFKFPDNSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRF+MESGAKGCEV++SGKLRA RAKSMKF DG+MI SGQPV +++D AVRHVL++QGV
Sbjct: 123 VLRFVMESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPVKDFVDEAVRHVLMKQGV 182
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV-APATAT 225
LGIKVKIM WD +G+ G PLPD VTI KEE + AP + +
Sbjct: 183 LGIKVKIMQGWDPEGRAGKPFPLPDAVTILEPKEEAPILAPVSES 227
>gi|396493922|ref|XP_003844188.1| similar to 40S ribosomal protein S3 [Leptosphaeria maculans JN3]
gi|312220768|emb|CBY00709.1| similar to 40S ribosomal protein S3 [Leptosphaeria maculans JN3]
Length = 264
Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 168/222 (75%), Positives = 186/222 (83%), Gaps = 1/222 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 SAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGVL
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVL 185
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
GIKVKIM D +GK GP+ LPD VT I P +E+ V P +
Sbjct: 186 GIKVKIMRGSDPEGKAGPSQTLPDSVTIIEPKEEQPVVQPMS 227
>gi|336370495|gb|EGN98835.1| hypothetical protein SERLA73DRAFT_181508 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383275|gb|EGO24424.1| hypothetical protein SERLADRAFT_467690 [Serpula lacrymans var.
lacrymans S7.9]
Length = 262
Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 170/226 (75%), Positives = 188/226 (83%), Gaps = 1/226 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MAAHISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQFRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATAT 225
VLGIKVKIM D +G GP PLPD V I P +++ P++ +
Sbjct: 181 VLGIKVKIMKGSDSEGLVGPRKPLPDSVQIIEPPVDKIVSEPSSES 226
>gi|392571524|gb|EIW64696.1| 40S ribosomal protein S3 [Trametes versicolor FP-101664 SS1]
Length = 261
Score = 339 bits (869), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 167/224 (74%), Positives = 189/224 (84%), Gaps = 1/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELN+ TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSGQISKKRKFVADGVFRAELNDFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFP+NS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPDNSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHV+LRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
VLGIKVKIM WD +G+ GP PLPD V I P +++ P +
Sbjct: 181 VLGIKVKIMKGWDPEGQLGPRKPLPDSVQILEPPLDKIVAEPTS 224
>gi|335345828|gb|AEH41494.1| 40S ribosomal protein S3 [Endocarpon pusillum]
Length = 264
Score = 339 bits (869), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 168/220 (76%), Positives = 183/220 (83%), Gaps = 1/220 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHV LRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVFLRQGVLGI 187
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
KVKIM D +GK GP PD VT I P +E+ V P +
Sbjct: 188 KVKIMRGSDPEGKSGPQKSFPDSVTIIEPKEEQPVVQPMS 227
>gi|154301908|ref|XP_001551365.1| 40S ribosomal protein S3 [Botryotinia fuckeliana B05.10]
gi|347836345|emb|CCD50917.1| similar to 40S ribosomal protein S3 [Botryotinia fuckeliana]
Length = 263
Score = 338 bits (868), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 167/220 (75%), Positives = 185/220 (84%), Gaps = 1/220 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 10 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 69
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 70 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 129
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLL+QGVLGI
Sbjct: 130 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLKQGVLGI 189
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
KVKIM D +GK GP+ LPD VT I P +E+ V P +
Sbjct: 190 KVKIMRGSDPEGKSGPSKGLPDSVTIIEPKEEQSVVQPMS 229
>gi|209693449|ref|NP_001129413.1| ribosomal protein S3 [Acyrthosiphon pisum]
gi|239790667|dbj|BAH71881.1| ACYPI005949 [Acyrthosiphon pisum]
Length = 245
Score = 338 bits (868), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 164/223 (73%), Positives = 187/223 (83%), Gaps = 1/223 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A S K++FV+DG+ AELNE LTRELAEDGYSGV+VR P RTEI+I ATRTQNVLG+
Sbjct: 3 AKTTSVKKRFVSDGMLRAELNEFLTRELAEDGYSGVDVRAAPSRTEIVISATRTQNVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTS++QKRF F + +VEL+AEKV RGLCA+AQAESLRYKL+GGLAVRRACYG
Sbjct: 63 KGRRIRELTSLIQKRFDFKDKAVELFAEKVAQRGLCAVAQAESLRYKLIGGLAVRRACYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y++ A RHVLLRQGV
Sbjct: 123 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNVATRHVLLRQGV 182
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVY-VAPAT 223
LGIKVKIML WDQ GK GP PLPD V++ KEE+ +AP +
Sbjct: 183 LGIKVKIMLPWDQTGKLGPKKPLPDNVSVAEPKEEILPIAPTS 225
>gi|156051430|ref|XP_001591676.1| 40S ribosomal protein S3 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154704900|gb|EDO04639.1| ribosomal protein S3 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 263
Score = 338 bits (868), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 167/220 (75%), Positives = 185/220 (84%), Gaps = 1/220 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 10 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 69
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 70 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 129
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLL+QGVLGI
Sbjct: 130 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLKQGVLGI 189
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
KVKIM D +GK GP+ LPD VT I P +E+ V P +
Sbjct: 190 KVKIMRGSDPEGKSGPSKGLPDSVTIIEPKEEQSVVQPMS 229
>gi|169616949|ref|XP_001801889.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15]
gi|111059574|gb|EAT80694.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15]
Length = 266
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 168/220 (76%), Positives = 185/220 (84%), Gaps = 1/220 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDEATRHVLLRQGVLGI 187
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
KVKIM D +GK GP+ LPD VT I P +E+ V P +
Sbjct: 188 KVKIMRGSDPEGKAGPSKTLPDSVTIIEPKEEQPVVQPMS 227
>gi|296825392|ref|XP_002850808.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480]
gi|238838362|gb|EEQ28024.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480]
Length = 266
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/212 (78%), Positives = 180/212 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGVLGI
Sbjct: 129 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D +GK GP LPD VTI KEE
Sbjct: 189 KVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 220
>gi|46122111|ref|XP_385609.1| hypothetical protein FG05433.1 [Gibberella zeae PH-1]
Length = 255
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/221 (75%), Positives = 185/221 (83%), Gaps = 1/221 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 2 RISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 61
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVL
Sbjct: 62 RRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVL 121
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGVLG
Sbjct: 122 RFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLG 181
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
IKVKIM D +GK GP LPD VT I P +E+ + P +
Sbjct: 182 IKVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQAVLQPVS 222
>gi|315055209|ref|XP_003176979.1| 40S ribosomal protein S3 [Arthroderma gypseum CBS 118893]
gi|311338825|gb|EFQ98027.1| 30S ribosomal protein S14p/S29e [Arthroderma gypseum CBS 118893]
Length = 266
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/212 (78%), Positives = 180/212 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGVLGI
Sbjct: 129 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D +GK GP LPD VTI KEE
Sbjct: 189 KVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEE 220
>gi|327307562|ref|XP_003238472.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892]
gi|326458728|gb|EGD84181.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892]
gi|326470843|gb|EGD94852.1| 40S ribosomal protein S3 [Trichophyton tonsurans CBS 112818]
gi|326478407|gb|EGE02417.1| 40S ribosomal protein S3 [Trichophyton equinum CBS 127.97]
Length = 266
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/212 (78%), Positives = 180/212 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGVLGI
Sbjct: 129 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D +GK GP LPD VTI KEE
Sbjct: 189 KVKIMRGSDPEGKSGPQKTLPDSVTIIEPKEE 220
>gi|302508557|ref|XP_003016239.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371]
gi|302657285|ref|XP_003020367.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517]
gi|291179808|gb|EFE35594.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371]
gi|291184196|gb|EFE39749.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517]
Length = 266
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 167/212 (78%), Positives = 180/212 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGVLGI
Sbjct: 129 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D +GK GP LPD VTI KEE
Sbjct: 189 KVKIMRGSDPEGKSGPQKTLPDSVTIIEPKEE 220
>gi|354473311|ref|XP_003498879.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 240
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 175/226 (77%), Positives = 185/226 (81%), Gaps = 5/226 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRE D Y GVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRE---DSYLGVEVRVTPTRTEIIILATRTQNVLG 57
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG RIRELT+VVQKRF FPE SVELYAEKV R LCAIAQAESLRYKLLGGLAVR ACY
Sbjct: 58 EKGPRIRELTAVVQKRFGFPEGSVELYAEKVATRRLCAIAQAESLRYKLLGGLAVRSACY 117
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVR+VLLRQ
Sbjct: 118 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRYVLLRQA 177
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VLGIKVKIML W+ GK P PLPD V+I K+E+ P T S
Sbjct: 178 VLGIKVKIMLPWETSGKISPQKPLPDHVSIVEPKDEIL--PTTPIS 221
>gi|403415257|emb|CCM01957.1| predicted protein [Fibroporia radiculosa]
Length = 260
Score = 336 bits (862), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 166/224 (74%), Positives = 187/224 (83%), Gaps = 1/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +QISKKRKFVADGVF AELN+ TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MTSQISKKRKFVADGVFRAELNDFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV +RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQSRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MES AKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHV+LRQG
Sbjct: 121 GVLRFVMESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAVDFVDYAVRHVMLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
VLGIKVKIM D G+ GP PLPD V I P +++ P +
Sbjct: 181 VLGIKVKIMKGTDPDGQSGPRKPLPDSVQILEPPLDKIVAEPTS 224
>gi|348670844|gb|EGZ10665.1| hypothetical protein PHYSODRAFT_287105 [Phytophthora sojae]
Length = 249
Score = 336 bits (862), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 164/218 (75%), Positives = 187/218 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF+AELNE+L REL DGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MAANISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPMRTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIR LTSVVQKRF FP+ +VELYAE+V NRGLC+ AQAESL+Y+LLGGLAVRRACY
Sbjct: 61 EKGQRIRALTSVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
V+RF+ME+GAKG +VIVSGKLRAQRAK+MKF +GYM+ +G EY+D+AVRHVL+RQG
Sbjct: 121 SVVRFVMEAGAKGVQVIVSGKLRAQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVY 218
VLG+KV IML D GKQGP L D+VTI KEEVY
Sbjct: 181 VLGVKVSIMLPHDPTGKQGPKRALDDVVTILEPKEEVY 218
>gi|409083492|gb|EKM83849.1| hypothetical protein AGABI1DRAFT_32206 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 673
Score = 336 bits (861), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 168/218 (77%), Positives = 187/218 (85%), Gaps = 1/218 (0%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
KKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLGEKGRRI
Sbjct: 415 KKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLGEKGRRI 474
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
RELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACYGVLRF+
Sbjct: 475 RELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFV 534
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV E++D AVRHVLL+QGVLGIKV
Sbjct: 535 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVREFVDYAVRHVLLKQGVLGIKV 594
Query: 187 KIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPAT 223
KIM D +G+ GP PLPD V I+ P ++V + P++
Sbjct: 595 KIMKGHDPEGQLGPKKPLPDAVQIYEPPVDKVVLEPSS 632
>gi|388507388|gb|AFK41760.1| unknown [Lotus japonicus]
Length = 258
Score = 335 bits (860), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 166/226 (73%), Positives = 194/226 (85%), Gaps = 3/226 (1%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
AT ISKKRK +ADGVF+AELNE+LTREL E+GYSGVEVRVTP+RTEIIIRATRTQNVLGE
Sbjct: 3 ATNISKKRKIIADGVFYAELNELLTRELGEEGYSGVEVRVTPLRTEIIIRATRTQNVLGE 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTS+VQKRF FPE +VELYAE+V+NR L AIAQAESLR+KLLGGLAVRRACYG
Sbjct: 63 KGRRIRELTSLVQKRFNFPEGNVELYAERVSNRALSAIAQAESLRFKLLGGLAVRRACYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLR+IME+GAKG E+++SGKLRA RAK+MKF+DGYMI SG VN Y+D AV+H+ L+QGV
Sbjct: 123 VLRYIMENGAKGVEIVISGKLRAARAKAMKFRDGYMIKSGDAVNHYVDYAVKHIQLKQGV 182
Query: 182 LGIKVKIMLEWDQKGKQGPTT-PLPDLVTIHPLKEE--VYVAPATA 224
LGIKVKIM+ +D GK+G +T D+VT+ KEE + V P T
Sbjct: 183 LGIKVKIMMPYDPTGKEGGSTVKQSDVVTVTEPKEETALSVPPKTG 228
>gi|294932119|ref|XP_002780125.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239890023|gb|EER11920.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 261
Score = 335 bits (859), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 162/223 (72%), Positives = 192/223 (86%), Gaps = 1/223 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRRA YGVL
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVL 128
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V +RQG+LG
Sbjct: 129 RFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQGILG 188
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
I+VKIM+ +D +GK GP T LPD +TIH KE+ V P AT+
Sbjct: 189 IRVKIMMAYDPEGKSGPKTRLPDDITIHEPKEDT-VFPIEATT 230
>gi|294875936|ref|XP_002767474.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239869132|gb|EER00192.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 261
Score = 335 bits (859), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 162/223 (72%), Positives = 192/223 (86%), Gaps = 1/223 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRRA YGVL
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVL 128
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V +RQG+LG
Sbjct: 129 RFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQGILG 188
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
I+VKIM+ +D +GK GP T LPD +TIH KE+ V P AT+
Sbjct: 189 IRVKIMMAYDPEGKSGPKTRLPDDITIHEPKEDT-VFPIEATT 230
>gi|301107834|ref|XP_002902999.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4]
gi|262098117|gb|EEY56169.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4]
Length = 246
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/224 (74%), Positives = 189/224 (84%), Gaps = 3/224 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF+AELNE+L REL DGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MAANISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPMRTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIR LTSVVQKRF FP+ +VELYAE+V NRGLC+ AQAESL+Y+LLGGLAVRRACY
Sbjct: 61 EKGQRIRALTSVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
V+RF+ME+GAKG +VIVSGKLRAQRAK+MKF +GYM+ +G EY+D+AVRHVL+RQG
Sbjct: 121 SVVRFVMEAGAKGVQVIVSGKLRAQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV---YVAP 221
VLG+KV IML D GKQGP L D+VTI KEEV YV P
Sbjct: 181 VLGVKVSIMLPHDPTGKQGPKRALDDVVTILEPKEEVHRPYVEP 224
>gi|353240330|emb|CCA72204.1| probable 40S ribosomal protein S3 [Piriformospora indica DSM 11827]
Length = 268
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 165/224 (73%), Positives = 186/224 (83%), Gaps = 1/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AEL E RELAE+GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELGEFFMRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFPE S+ELYAEKV +RGL A+AQ ESLRYKLLGGLAVRRA Y
Sbjct: 61 EKGRRIRELTSLVQKRFKFPEGSLELYAEKVLHRGLSAVAQCESLRYKLLGGLAVRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MES AKGCEV++SGKLRA RAKSMKF +G+MI SGQP +++D AVRHV+LRQG
Sbjct: 121 GVLRFVMESNAKGCEVVISGKLRAARAKSMKFTEGFMIHSGQPARDFVDEAVRHVMLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
VLGIKVKIM WD G+ GP PLPD+V I P ++V+ P +
Sbjct: 181 VLGIKVKIMKGWDPNGETGPRKPLPDMVQITEPGIDKVFAEPTS 224
>gi|209879906|ref|XP_002141393.1| 40S ribosomal protein S3 [Cryptosporidium muris RN66]
gi|209556999|gb|EEA07044.1| 40S ribosomal protein S3, putative [Cryptosporidium muris RN66]
Length = 221
Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 163/216 (75%), Positives = 189/216 (87%), Gaps = 1/216 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MA Q ISKKRKFV DGVF AELNE L+ LAEDGY+GVEVRVTP+RTEIIIRATRT+ VL
Sbjct: 1 MAPQVISKKRKFVNDGVFEAELNEFLSCTLAEDGYAGVEVRVTPIRTEIIIRATRTREVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
G KGRRIRELTS+VQKRF FP SVEL+AE++ NRGLCA+AQAESLRYKLL G+AVRRAC
Sbjct: 61 GVKGRRIRELTSLVQKRFNFPAGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLR +MESGAKGCEVIVSGKLRAQRAKSMKF+DGYMI++GQP +Y+D AVR+VL++Q
Sbjct: 121 YGVLRHVMESGAKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDYVDKAVRNVLMKQ 180
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE 215
GVLG++VKIML +D +GK GP+ PLPD + + KE
Sbjct: 181 GVLGVQVKIMLPYDPEGKVGPSNPLPDAIMVREPKE 216
>gi|296094|emb|CAA51425.1| ribosomal protein S3 [Drosophila melanogaster]
Length = 246
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/227 (73%), Positives = 186/227 (81%), Gaps = 1/227 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP TEIII AT+TQ VL EKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPFGTEIIIMATKTQQVLAEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL G LAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPATATSIELP 230
KVK+ML +D K K GP PLPD V+ + P +E++Y P T I P
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEYKIPPP 233
>gi|38048231|gb|AAR10018.1| similar to Drosophila melanogaster RpS3, partial [Drosophila
yakuba]
Length = 215
Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 162/206 (78%), Positives = 179/206 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI 210
KVK+ML +D K K GP P+PD V++
Sbjct: 187 KVKVMLPYDPKNKIGPKKPVPDNVSV 212
>gi|67614912|ref|XP_667397.1| ribosomal protein [Cryptosporidium hominis TU502]
gi|54658527|gb|EAL37164.1| ribosomal protein [Cryptosporidium hominis]
Length = 221
Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 160/216 (74%), Positives = 190/216 (87%), Gaps = 1/216 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MA Q ISKKRKF+ DGVF AELNE L+ LAEDGY+GVEVRVTP++TEIIIRATRT+ VL
Sbjct: 1 MAPQLISKKRKFINDGVFEAELNEFLSCTLAEDGYAGVEVRVTPIKTEIIIRATRTREVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
G KGRRIRELTS++QKRF FPE SVEL+AE++ NRGLCA+AQAESLRYKLL G+AVRRAC
Sbjct: 61 GVKGRRIRELTSLIQKRFNFPEGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLR +MESGAKGCEVIVSGKLRAQRAKSMKF+DGYMI++GQP +++D AVR+V+++Q
Sbjct: 121 YGVLRHVMESGAKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDFVDKAVRNVMMKQ 180
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE 215
GVLG++VKIML +D +GK GP+ PLPD V + KE
Sbjct: 181 GVLGVQVKIMLPYDPEGKTGPSKPLPDAVMVREPKE 216
>gi|66362866|ref|XP_628399.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa
II]
gi|46229434|gb|EAK90252.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa
II]
gi|323508759|dbj|BAJ77273.1| cgd7_2250 [Cryptosporidium parvum]
Length = 221
Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 160/216 (74%), Positives = 190/216 (87%), Gaps = 1/216 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MA Q ISKKRKF+ DGVF AELNE L+ LAEDGY+GVEVRVTP++TEIIIRATRT+ VL
Sbjct: 1 MAPQLISKKRKFINDGVFEAELNEFLSCTLAEDGYAGVEVRVTPIKTEIIIRATRTREVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
G KGRRIRELTS++QKRF FPE SVEL+AE++ NRGLCA+AQAESLRYKLL G+AVRRAC
Sbjct: 61 GVKGRRIRELTSLIQKRFNFPEGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLR +MESGAKGCEVIVSGKLRAQRAKSMKF+DGYMI++GQP +++D AVR+V+++Q
Sbjct: 121 YGVLRHVMESGAKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDFVDKAVRNVMMKQ 180
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE 215
GVLG++VKIML +D +GK GP+ PLPD V + KE
Sbjct: 181 GVLGVQVKIMLPYDPEGKTGPSKPLPDAVMVREPKE 216
>gi|384483178|gb|EIE75358.1| 40S ribosomal protein S3 [Rhizopus delemar RA 99-880]
Length = 231
Score = 332 bits (851), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 163/217 (75%), Positives = 185/217 (85%), Gaps = 3/217 (1%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
VADGVF+AELNE LTRELAE GY+GVEVRVTP RTEIIIRAT TQNVLGEKGRRIRELT+
Sbjct: 4 VADGVFYAELNEFLTRELAEAGYAGVEVRVTPARTEIIIRATHTQNVLGEKGRRIRELTT 63
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
+VQKRFKFPEN+VELYAE+V NRGLCAIAQ ES+++KLL GLAVRRACYGV+RF+MESGA
Sbjct: 64 LVQKRFKFPENAVELYAERVQNRGLCAIAQCESVKFKLLNGLAVRRACYGVIRFVMESGA 123
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLE 191
KGCEV+VSGK+RA RAK+MKF DG+MI SG P E+I +AVRHV LRQGVLGIKVKIML+
Sbjct: 124 KGCEVVVSGKVRAARAKAMKFADGFMIHSGNPAREFITTAVRHVDLRQGVLGIKVKIMLD 183
Query: 192 WDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIE 228
D G+ GP LPD+VTI K+E AP T S +
Sbjct: 184 NDPTGRNGPKQTLPDIVTILEPKDE---APITEPSAQ 217
>gi|149068847|gb|EDM18399.1| rCG40478, isoform CRA_i [Rattus norvegicus]
Length = 189
Score = 332 bits (851), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 165/185 (89%), Positives = 170/185 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIK 185
VLGIK
Sbjct: 181 VLGIK 185
>gi|405973234|gb|EKC37958.1| 40S ribosomal protein S3 [Crassostrea gigas]
Length = 237
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/227 (75%), Positives = 181/227 (79%), Gaps = 13/227 (5%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADGVF AELN LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 17 FVADGVFKAELNNFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 76
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
SVVQKRF FPE +VE RGLCAIAQ ESLRYKL+GGLAVRRACYGVLRFIMESG
Sbjct: 77 SVVQKRFNFPEGTVE--------RGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 128
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG MI SG P+N+Y+D+AVRHVLLRQGVLGIKVKIML
Sbjct: 129 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQGVLGIKVKIML 188
Query: 191 EWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT----ATSIELPVA 232
WD GK GP PLPD V+ + P E V P + A E P A
Sbjct: 189 PWDPSGKIGPKRPLPDHVSVVEPKDEAVPAHPYSEQKGAKPTEPPAA 235
>gi|167519583|ref|XP_001744131.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777217|gb|EDQ90834.1| predicted protein [Monosiga brevicollis MX1]
Length = 252
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 160/213 (75%), Positives = 183/213 (85%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF AELNE+ RELAEDGY+GVE++ TP TEI+I ATRTQ+VLGEKG
Sbjct: 5 QMSKKRKFVADGVFKAELNELFMRELAEDGYAGVEIKKTPKSTEIVILATRTQHVLGEKG 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT+ +QKRF F ++ VEL+AEKV NRGLCA+AQ E+LRYKL GGLAVRRACYGV+
Sbjct: 65 RRIRELTAFIQKRFGFQKDEVELFAEKVANRGLCAVAQCENLRYKLTGGLAVRRACYGVV 124
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RF+MESGAKGCEVIVSGKLRAQRAK+MKF DG+MISSG P EYID+AVRHV +RQG++G
Sbjct: 125 RFVMESGAKGCEVIVSGKLRAQRAKAMKFGDGFMISSGNPTREYIDTAVRHVPMRQGMIG 184
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
IKVKIML D GK GP PLPD +TI KEE
Sbjct: 185 IKVKIMLPHDPSGKTGPKAPLPDAITILEAKEE 217
>gi|322693782|gb|EFY85631.1| 40S ribosomal protein S3, putative [Metarhizium acridum CQMa 102]
Length = 255
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 163/213 (76%), Positives = 180/213 (84%), Gaps = 1/213 (0%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
VADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE+GRRIRELTS
Sbjct: 13 VADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGEQGRRIRELTS 72
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLRFIMESGA
Sbjct: 73 LIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESGA 132
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLE 191
KGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+ID+A RHVLLRQGVLGIKVKIM
Sbjct: 133 KGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDTATRHVLLRQGVLGIKVKIMRG 192
Query: 192 WDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
D GK GP+ LPD VTI P +E+V + P +
Sbjct: 193 SDPDGKAGPSKSLPDAVTIFEPKEEQVVLQPVS 225
>gi|324513448|gb|ADY45526.1| 40S ribosomal protein S3 [Ascaris suum]
Length = 249
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 165/210 (78%), Positives = 177/210 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A QI+KKRK V DGVF AELN L +ELAEDGYSGVEVR TP R E+II ATRTQ+VLGE
Sbjct: 4 AQQITKKRKAVQDGVFKAELNNFLMKELAEDGYSGVEVRRTPARAEVIIMATRTQSVLGE 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYG
Sbjct: 64 RGRRIRELTSVVQKRFGFAEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYG 123
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMES A+GCEVIVSGKLR QRAKSMKF DG MI SGQPVN+YI AVRHV LRQGV
Sbjct: 124 VLRFIMESSAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGV 183
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIH 211
LGIKVKIML D KG+ GP LPD + I
Sbjct: 184 LGIKVKIMLPHDPKGQMGPRGALPDQIHIQ 213
>gi|401881615|gb|EJT45911.1| ribosomal protein S3 [Trichosporon asahii var. asahii CBS 2479]
gi|406702723|gb|EKD05674.1| ribosomal protein S3 [Trichosporon asahii var. asahii CBS 8904]
Length = 248
Score = 330 bits (845), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 160/210 (76%), Positives = 181/210 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+A Q+SKKRKFVADGVF AEL E TRELAE+GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 3 VAHQVSKKRKFVADGVFQAELGEFFTRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+GRRIREL ++V+KRF+FPENS+ELYAEKV RGL A+AQAESLRYKLLGGLA+RRACY
Sbjct: 63 HQGRRIRELKALVEKRFRFPENSLELYAEKVQYRGLSAVAQAESLRYKLLGGLAMRRACY 122
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLR++MESGAKGCEV+VSGKLRA RAKSMKF DG++I SGQP ++ID AVRHVLLRQG
Sbjct: 123 GVLRYVMESGAKGCEVVVSGKLRAARAKSMKFSDGFLIHSGQPSVDFIDYAVRHVLLRQG 182
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
VLGIKVKIM D +G+ GP PLPD VT+
Sbjct: 183 VLGIKVKIMRPHDPEGRMGPAHPLPDQVTL 212
>gi|67527620|ref|XP_661691.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4]
gi|40739785|gb|EAA58975.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4]
gi|259481325|tpe|CBF74736.1| TPA: hypothetical protein similar to 40s ribosomal protein s3
(Eurofung) [Aspergillus nidulans FGSC A4]
Length = 264
Score = 329 bits (843), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 165/212 (77%), Positives = 177/212 (83%), Gaps = 2/212 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+I T TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDI--STTHTQEVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 66 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+IDSA RHVLLRQGVLGI
Sbjct: 126 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 185
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D +GK GP LPD VTI KEE
Sbjct: 186 KVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEE 217
>gi|223999667|ref|XP_002289506.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974714|gb|EED93043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 270
Score = 328 bits (842), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 162/214 (75%), Positives = 182/214 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+++S KR+FVADGVF+AELNE+LTRELAEDGY+GVEVR TP RTEIIIRAT+TQNVLGEK
Sbjct: 7 SKMSIKRRFVADGVFYAELNELLTRELAEDGYAGVEVRTTPHRTEIIIRATKTQNVLGEK 66
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G+RIRELTSVVQKRF F E +VELYAE+V NRGLCA AQAESL++KLL GLAVRRACYGV
Sbjct: 67 GQRIRELTSVVQKRFDFAEGAVELYAERVQNRGLCAQAQAESLKFKLLAGLAVRRACYGV 126
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
+RF+ME+ AKGCEVIVSGKLR QRAK MKF DGYMI +G Y D AVRHVL+RQGV+
Sbjct: 127 VRFVMEASAKGCEVIVSGKLRGQRAKGMKFGDGYMIKTGHAGQVYTDVAVRHVLMRQGVI 186
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
GIKV IML D KG QGP PL D+VTI KEE
Sbjct: 187 GIKVAIMLPHDPKGVQGPKIPLDDVVTILEPKEE 220
>gi|401408051|ref|XP_003883474.1| SSU ribosomal protein S3P, related [Neospora caninum Liverpool]
gi|325117891|emb|CBZ53442.1| SSU ribosomal protein S3P, related [Neospora caninum Liverpool]
Length = 235
Score = 328 bits (842), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 161/213 (75%), Positives = 184/213 (86%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
KKRKFV DGVF AELNE L+ L+EDGYSGVEVRVTP+RTEIIIRATRT+ VLG+KGRRI
Sbjct: 9 KKRKFVKDGVFQAELNEFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKGRRI 68
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
RELTSVVQKRF F +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGVLR I
Sbjct: 69 RELTSVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHI 128
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEV+VSGKLRAQRAKSMKFKDGY+IS+G+P ++D A+R V LRQGVLG++V
Sbjct: 129 MESGAKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLGVRV 188
Query: 187 KIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV 219
KIML D +GK+GP TPLPD + + K E+ V
Sbjct: 189 KIMLPHDPEGKRGPATPLPDTIIVMDPKPEIPV 221
>gi|84996723|ref|XP_953083.1| 40S ribosomal protein S3 [Theileria annulata strain Ankara]
gi|65304079|emb|CAI76458.1| 40S ribosomal protein S3, putative [Theileria annulata]
Length = 216
Score = 328 bits (842), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 183/205 (89%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SK+++F+ DGVF AELNE L+R LAEDGYSGVE+R+TPVRTEIIIRATRT+ VLGEK RR
Sbjct: 7 SKQKRFINDGVFNAELNEFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 66
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLA+RRA YGVLR
Sbjct: 67 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAIRRAAYGVLRQ 126
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY+IS+GQP EY+++AVR V LRQGVLGIK
Sbjct: 127 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQGVLGIK 186
Query: 186 VKIMLEWDQKGKQGPTTPLPDLVTI 210
VKIML +D +G+ GP+T LPD VT+
Sbjct: 187 VKIMLPYDPEGRLGPSTLLPDTVTV 211
>gi|187233664|gb|ACD01096.1| ribosomal protein S1a [Adineta vaga]
Length = 215
Score = 328 bits (842), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 163/212 (76%), Positives = 181/212 (85%), Gaps = 2/212 (0%)
Query: 1 MAT--QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNV 58
MAT ISKKRKF+ +GVF AELNE TRELAEDGYSG+E+RVTP RTEIII AT+TQ V
Sbjct: 1 MATTANISKKRKFIREGVFHAELNEFFTRELAEDGYSGLEIRVTPQRTEIIIMATKTQAV 60
Query: 59 LGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRA 118
LGEKGRRIRELTSV+QKRF +PENS+EL+A+KV RGLCAIAQAESLRYKL+GGL VRRA
Sbjct: 61 LGEKGRRIRELTSVIQKRFGYPENSIELFAQKVVTRGLCAIAQAESLRYKLMGGLPVRRA 120
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
CYGVLRFIMESGA+GCE+IVSGKLR QRAK+MKF DG MI SG PVN+Y+ AVRHVLLR
Sbjct: 121 CYGVLRFIMESGAQGCEIIVSGKLRGQRAKAMKFIDGLMIHSGDPVNDYVQYAVRHVLLR 180
Query: 179 QGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
QGVLGIKVKIML D K +G PLPD + I
Sbjct: 181 QGVLGIKVKIMLPHDPKEGKGVKKPLPDHIQI 212
>gi|403223989|dbj|BAM42119.1| 40S ribosomal protein S3 [Theileria orientalis strain Shintoku]
Length = 216
Score = 328 bits (842), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 183/205 (89%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SK+++F+ DGVF AELNE L+R LAEDGYSGVE+R+TPVRTEIIIRATRT+ VLGEK RR
Sbjct: 8 SKQKRFINDGVFNAELNEFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 67
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLAVRRA YGVLR
Sbjct: 68 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAVRRAAYGVLRH 127
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY+IS+GQP +Y+++AVR V LRQGVLGIK
Sbjct: 128 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQQYVNTAVRSVQLRQGVLGIK 187
Query: 186 VKIMLEWDQKGKQGPTTPLPDLVTI 210
VKIML +D +G+ GP+T LPD VT+
Sbjct: 188 VKIMLPYDPEGRIGPSTLLPDTVTV 212
>gi|71028826|ref|XP_764056.1| 40S ribosomal protein S3 [Theileria parva strain Muguga]
gi|68351010|gb|EAN31773.1| 40S ribosomal protein S3, putative [Theileria parva]
Length = 216
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 160/205 (78%), Positives = 183/205 (89%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SK+++F+ DGVF AELNE L+R LAEDGYSGVE+R+TPVRTEIIIRATRT+ VLGEK RR
Sbjct: 8 SKQKRFINDGVFNAELNEFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 67
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLA+RRA YGVLR
Sbjct: 68 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAIRRAAYGVLRQ 127
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY+IS+GQP EY+++AVR V LRQGVLGIK
Sbjct: 128 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQGVLGIK 187
Query: 186 VKIMLEWDQKGKQGPTTPLPDLVTI 210
VKIML +D +G+ GP+T LPD VT+
Sbjct: 188 VKIMLPYDPEGRLGPSTLLPDTVTV 212
>gi|19113555|ref|NP_596763.1| 40S ribosomal protein S3 [Schizosaccharomyces pombe 972h-]
gi|6094179|sp|O60128.1|RS3_SCHPO RecName: Full=40S ribosomal protein S3
gi|3133108|emb|CAA19033.1| 40S ribosomal protein S3 (predicted) [Schizosaccharomyces pombe]
gi|110082655|dbj|BAE97279.1| ribosomal protein s3 [Schizosaccharomyces pombe]
Length = 249
Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/223 (73%), Positives = 188/223 (84%), Gaps = 4/223 (1%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISKKRKFVADGVF+AELNE TREL+E+GYSG EVRVTP R+EIIIRAT TQ+VLGE
Sbjct: 4 AFTISKKRKFVADGVFYAELNEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGE 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKF EN+VELYAEKV NRGLCA+AQ ESLRYKLL GLAVRRA YG
Sbjct: 64 KGRRIRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYG 123
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLR++ME+GAKGCEV++SGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGV
Sbjct: 124 VLRYVMEAGAKGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDSATRHVLLRQGV 183
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
LG+KVKIML + K +Q + LPD+V + P +EE P T
Sbjct: 184 LGVKVKIMLP-EPKTRQKKS--LPDIVVVLDPKEEEPITKPYT 223
>gi|326521618|dbj|BAK00385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/234 (70%), Positives = 188/234 (80%), Gaps = 10/234 (4%)
Query: 1 MAT--QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNV 58
MAT +SKKRKF+ +GVF AELNE TRELAEDGYSG+E+RVTP RTEIII AT+TQ V
Sbjct: 1 MATTANVSKKRKFIREGVFHAELNEFFTRELAEDGYSGLEIRVTPQRTEIIIMATKTQAV 60
Query: 59 LGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRA 118
LGEKGRRIRELTSV+QKRF +PENS+EL+A+KV +RGLCAIAQAESLRYKL+GG VRRA
Sbjct: 61 LGEKGRRIRELTSVIQKRFGYPENSIELFAQKVVSRGLCAIAQAESLRYKLMGGFPVRRA 120
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
CYGVLRFIM+SGA+GCE++VSGKLR QRAK+MKF DG MI SG PVN+Y+ AVRHVLLR
Sbjct: 121 CYGVLRFIMDSGAQGCEIVVSGKLRGQRAKAMKFIDGLMIHSGDPVNDYVQFAVRHVLLR 180
Query: 179 QGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELPVA 232
QGVLGIKVKIML D K +G PLPD + I V P T+I P +
Sbjct: 181 QGVLGIKVKIMLPHDPKEGKGVKKPLPDHIQI--------VQPKDETAITQPYS 226
>gi|430813642|emb|CCJ29017.1| unnamed protein product [Pneumocystis jirovecii]
Length = 412
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 164/217 (75%), Positives = 178/217 (82%), Gaps = 6/217 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+A IS FVADGVFFAELNE TREL+ +GYSG EVRVTP RTEIIIRAT TQ+VLG
Sbjct: 165 LANLISLFAMFVADGVFFAELNEFFTRELSAEGYSGTEVRVTPSRTEIIIRATHTQDVLG 224
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS++QKRFKFPE SVELYAEKV NRGLCA+AQ ESLRYKLL GLAVRRA Y
Sbjct: 225 EKGRRIRELTSLIQKRFKFPEGSVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAY 284
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV++SGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQG
Sbjct: 285 GVLRFIMESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPSRDFIDSATRHVLLRQG 344
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPD-LVTIHPLKEE 216
VLG+KVKIML K PLPD +V I P EE
Sbjct: 345 VLGVKVKIMLSESMTRK-----PLPDSVVVIEPKPEE 376
>gi|237837605|ref|XP_002368100.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49]
gi|211965764|gb|EEB00960.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49]
gi|221509134|gb|EEE34703.1| 40S ribosomal protein S3, putative [Toxoplasma gondii VEG]
Length = 235
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/213 (75%), Positives = 183/213 (85%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
KKRKFV DGVF AELNE L+ L+EDGYSGVEVRVTP+RTEIIIRATRT+ VLG+KGRRI
Sbjct: 9 KKRKFVKDGVFQAELNEFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKGRRI 68
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
RELTSVVQKRF F +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGVLR I
Sbjct: 69 RELTSVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHI 128
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEV+VSGKLRAQRAKSMKFKDGY+IS+G+P ++D A+R V LRQGVLG++V
Sbjct: 129 MESGAKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLGVRV 188
Query: 187 KIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV 219
KIML D +GK+GP PLPD + + K E+ V
Sbjct: 189 KIMLPHDPEGKRGPANPLPDTIIVMDPKPEIPV 221
>gi|397567805|gb|EJK45790.1| hypothetical protein THAOC_35575 [Thalassiosira oceanica]
Length = 266
Score = 326 bits (836), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/212 (75%), Positives = 182/212 (85%), Gaps = 2/212 (0%)
Query: 1 MAT--QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNV 58
MAT ++S KRKFVADGVF+AELNE+LTRELAEDGY+GVEVR TP RTEIIIRAT+TQNV
Sbjct: 2 MATRAKMSTKRKFVADGVFYAELNELLTRELAEDGYAGVEVRTTPHRTEIIIRATKTQNV 61
Query: 59 LGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRA 118
LGEKG+RIRELTSVVQKRF F E +VELYAE+V NRGLCA AQAESL++KLL GLAVRRA
Sbjct: 62 LGEKGQRIRELTSVVQKRFDFAEGAVELYAERVQNRGLCAQAQAESLKFKLLAGLAVRRA 121
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
CYGV+RF+ME+ AKGCEVIVSGKLR QRAK+MKF DGYMI +G Y D+AVRHV +R
Sbjct: 122 CYGVVRFVMEASAKGCEVIVSGKLRGQRAKAMKFGDGYMIKTGHAGQVYTDTAVRHVAMR 181
Query: 179 QGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
QG++GIKV IML D KG+ GP PL D+VTI
Sbjct: 182 QGMIGIKVSIMLPHDPKGQIGPKIPLDDVVTI 213
>gi|221488638|gb|EEE26852.1| 40S ribosomal protein S3, putative [Toxoplasma gondii GT1]
Length = 255
Score = 326 bits (835), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 161/216 (74%), Positives = 184/216 (85%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q KKRKFV DGVF AELNE L+ L+EDGYSGVEVRVTP+RTEIIIRATRT+ VLG+KG
Sbjct: 26 QTCKKRKFVKDGVFQAELNEFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKG 85
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSVVQKRF F +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGVL
Sbjct: 86 RRIRELTSVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVL 145
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
R IMESGAKGCEV+VSGKLRAQRAKSMKFKDGY+IS+G+P ++D A+R V LRQGVLG
Sbjct: 146 RHIMESGAKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLG 205
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV 219
++VKIML D +GK+GP PLPD + + K E+ V
Sbjct: 206 VRVKIMLPHDPEGKRGPANPLPDTIIVMDPKPEIPV 241
>gi|110456370|gb|ABG74703.1| putative ribosomal protein S3 [Diaphorina citri]
Length = 220
Score = 326 bits (835), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/211 (75%), Positives = 177/211 (83%)
Query: 22 NEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPE 81
+E LTRELAEDGYSGVE+R TP RTEIII ATRTQNVLG+KGRRIRELTSVVQKRFKF +
Sbjct: 1 DEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIRELTSVVQKRFKFAD 60
Query: 82 NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGK 141
++ELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGK
Sbjct: 61 GAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGK 120
Query: 142 LRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPT 201
LR QRAKSMKF DG MI SG P N+Y+++A RHVLLRQGVLGIKVKIML WD GK GP
Sbjct: 121 LRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPK 180
Query: 202 TPLPDLVTIHPLKEEVYVAPATATSIELPVA 232
PLPD V + KEEV ++ ++ P+A
Sbjct: 181 KPLPDNVNVLEPKEEVNPTIPSSQVLDKPLA 211
>gi|40643020|emb|CAD91437.1| ribosomal protein S3 [Crassostrea gigas]
Length = 187
Score = 325 bits (834), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 160/186 (86%), Positives = 169/186 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA +SKK+KFVADGVF AELN LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 2 MANPVSKKKKFVADGVFKAELNNFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 62 EKGRRIRELTSVVQKRFNFPEGTVELYAEKVAQRGLCAIAQCESLRYKLIGGLAVRRACY 121
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P+N+Y+D+AVRHVLLRQG
Sbjct: 122 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQG 181
Query: 181 VLGIKV 186
VLGIKV
Sbjct: 182 VLGIKV 187
>gi|393905484|gb|EFO25530.2| 40S ribosomal protein S3 [Loa loa]
Length = 250
Score = 325 bits (834), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 163/212 (76%), Positives = 175/212 (82%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 7 QMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRRACYGVL
Sbjct: 67 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVL 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMES A+GCEVIVSGKLR QRAKSMKF DG MI SGQPVN+YI AVRHV LRQGVLG
Sbjct: 127 RFIMESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLG 186
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE 215
IKVKIML D KG GP LPD + I E
Sbjct: 187 IKVKIMLPHDPKGNMGPRIALPDQIHIQEPNE 218
>gi|312071288|ref|XP_003138539.1| 40S ribosomal protein S3 [Loa loa]
Length = 249
Score = 325 bits (834), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 163/212 (76%), Positives = 175/212 (82%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 6 QMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRRACYGVL
Sbjct: 66 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMES A+GCEVIVSGKLR QRAKSMKF DG MI SGQPVN+YI AVRHV LRQGVLG
Sbjct: 126 RFIMESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE 215
IKVKIML D KG GP LPD + I E
Sbjct: 186 IKVKIMLPHDPKGNMGPRIALPDQIHIQEPNE 217
>gi|326436207|gb|EGD81777.1| 40S ribosomal protein S3 [Salpingoeca sp. ATCC 50818]
Length = 234
Score = 325 bits (834), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 165/228 (72%), Positives = 187/228 (82%), Gaps = 2/228 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKR+FVADGVF +ELNE L R L E GY+GVEVR TP RTEIII ATRTQ VLGEKG
Sbjct: 5 QMSKKRQFVADGVFKSELNEFLQRSLGEQGYAGVEVRKTPNRTEIIILATRTQEVLGEKG 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT +V+KRF F +N VEL+AEKV NRGLCA+AQ ESLRYKLLGGLAVRRACYGVL
Sbjct: 65 RRIRELTGLVKKRFGFKDN-VELFAEKVANRGLCAMAQCESLRYKLLGGLAVRRACYGVL 123
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
R +MESGAKGCEVI+SGKLRAQRAKSMKF DG+MIS+G P +YID+AVRHVLLRQGVLG
Sbjct: 124 RLVMESGAKGCEVIISGKLRAQRAKSMKFNDGFMISAGHPTRDYIDTAVRHVLLRQGVLG 183
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPATATSIELP 230
IKVKIM +D G+ GP+T LPD + I P +E+V P E+P
Sbjct: 184 IKVKIMRPYDPTGRNGPSTVLPDTLEIREPKEEDVPEKPYVQRLDEVP 231
>gi|392572589|gb|EIW65734.1| hypothetical protein TREMEDRAFT_41205 [Tremella mesenterica DSM
1558]
Length = 249
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/209 (76%), Positives = 176/209 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ QISKKRKF+ADGVF AEL E T ELA++GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 4 SAQISKKRKFIADGVFQAELGEFFTHELADEGYSGCEVRVTHARTEIIIRATHTQEVLGA 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
GRRIREL S+V KRFKFPENS+ELYAE+V RGL A+AQAESLRYKLLGGLA+RRACYG
Sbjct: 64 NGRRIRELRSLVMKRFKFPENSLELYAERVQYRGLSAVAQAESLRYKLLGGLAMRRACYG 123
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG MI SGQP +Y+D AVRHVLLRQGV
Sbjct: 124 VLRFVMESGAKGCEVVVSGKLRAARAKSMKFVDGLMIHSGQPAKDYVDYAVRHVLLRQGV 183
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
LGIKVKIM +D +G+ GP LPD VT+
Sbjct: 184 LGIKVKIMRPFDPEGRMGPAKNLPDAVTM 212
>gi|33772509|gb|AAQ54656.1| 40S ribosomal protein S3 [Oikopleura dioica]
gi|313212505|emb|CBY36474.1| unnamed protein product [Oikopleura dioica]
gi|313217134|emb|CBY38302.1| unnamed protein product [Oikopleura dioica]
gi|313233568|emb|CBY09740.1| unnamed protein product [Oikopleura dioica]
Length = 239
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/216 (73%), Positives = 182/216 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRK VA+GVF AEL+ L +ELAEDGYSGVEVR+TP RTEIII ATRTQNVLG+
Sbjct: 5 SANISKKRKHVAEGVFRAELDGYLRKELAEDGYSGVEVRITPKRTEIIILATRTQNVLGD 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
K +RIRELT++VQKRF+ + +VEL+AEKV NRGLCAIAQ ESLRYKL GGLAVRRA YG
Sbjct: 65 KAKRIRELTALVQKRFQIKDGAVELFAEKVANRGLCAIAQCESLRYKLEGGLAVRRAAYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV++SGKLR QRAK+MKF DG MI +G PV EY+D+AVRHV+LRQGV
Sbjct: 125 VLRFIMESGAKGCEVVISGKLRGQRAKAMKFTDGLMIHTGHPVTEYVDTAVRHVMLRQGV 184
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
+G+KVK+ML D GK GP TP PD+V I KEEV
Sbjct: 185 IGLKVKVMLPHDPAGKVGPKTPYPDIVEIREPKEEV 220
>gi|170577011|ref|XP_001893846.1| 40S ribosomal protein S3 [Brugia malayi]
gi|158599891|gb|EDP37316.1| 40S ribosomal protein S3, putative [Brugia malayi]
Length = 250
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/208 (77%), Positives = 174/208 (83%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
++SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 7 EMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRRACYGVL
Sbjct: 67 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVL 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMES A+GCEVIVSGKLR QRAKSMKF DG MI SGQPVN+YI AVRHV LRQGVLG
Sbjct: 127 RFIMESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLG 186
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIH 211
IKVKIML D KG GP LPD + I
Sbjct: 187 IKVKIMLPHDPKGNMGPRIALPDQIHIQ 214
>gi|58258267|ref|XP_566546.1| ribosomal protein S3 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134106179|ref|XP_778100.1| 40S ribosomal protein S3 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|321251025|ref|XP_003191933.1| ribosomal protein S3 [Cryptococcus gattii WM276]
gi|50260803|gb|EAL23453.1| hypothetical protein CNBA1030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222683|gb|AAW40727.1| ribosomal protein S3, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317458401|gb|ADV20146.1| Ribosomal protein S3, putative [Cryptococcus gattii WM276]
gi|405117477|gb|AFR92252.1| ribosomal protein S3 [Cryptococcus neoformans var. grubii H99]
Length = 252
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 159/212 (75%), Positives = 179/212 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF AELN+ TRELAE+GY+G EVRVT RTEIIIRAT TQ VLG+KGR
Sbjct: 7 ISKRRKFVADGVFQAELNDFFTRELAEEGYAGCEVRVTHARTEIIIRATHTQEVLGDKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIREL ++++KRFKFPEN++ELYAEKV RGL A AQAESLRYKLLGGLA+RRACYGVLR
Sbjct: 67 RIRELKALIEKRFKFPENALELYAEKVQYRGLSATAQAESLRYKLLGGLAMRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F+MESGAKGCEV+VSGKLRA RAKSMKF +G+M+ SGQP ++ID AVRHVLLRQGVLGI
Sbjct: 127 FVMESGAKGCEVVVSGKLRAARAKSMKFTEGFMVHSGQPARDFIDYAVRHVLLRQGVLGI 186
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM D G+QGP LPD V I K E
Sbjct: 187 KVKIMKPSDPAGRQGPAKNLPDDVQITEPKAE 218
>gi|388579652|gb|EIM19973.1| 40S ribosomal protein S3 [Wallemia sebi CBS 633.66]
Length = 244
Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/213 (75%), Positives = 180/213 (84%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SK RK V DGVF AEL E TREL+E+G+SG EVRVT RTEIIIRAT TQ VLGEKG
Sbjct: 7 QLSKSRKIVQDGVFQAELIEFFTRELSEEGFSGCEVRVTHARTEIIIRATHTQEVLGEKG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++VQKRFKFPENS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRACYGV+
Sbjct: 67 RRIRELTALVQKRFKFPENSLELYAEKVQNRGLSAVAQCESLRYKLLGGLAVRRACYGVV 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLRA RAK+MKF DG+MI SGQPV +++D AVRHVLL+QGVLG
Sbjct: 127 RFIMESGAKGCEVVVSGKLRAARAKAMKFTDGFMIHSGQPVRDFVDFAVRHVLLKQGVLG 186
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
+KVKIM D +G+ G PLPD V I KEE
Sbjct: 187 LKVKIMRPHDPEGRAGFPKPLPDSVVIVEPKEE 219
>gi|149068844|gb|EDM18396.1| rCG40478, isoform CRA_f [Rattus norvegicus]
Length = 181
Score = 323 bits (828), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 160/180 (88%), Positives = 165/180 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|213410238|ref|XP_002175889.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275]
gi|212003936|gb|EEB09596.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275]
Length = 251
Score = 322 bits (826), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 167/232 (71%), Positives = 190/232 (81%), Gaps = 8/232 (3%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISKKRKFVADGVF+AELNE TREL+E+GYSG EVRVTP R+EIIIRAT TQ+VLGE
Sbjct: 3 ALTISKKRKFVADGVFYAELNEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGE 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKF EN+VELYAEKV NRGLCA+AQ ESLRYKLL GLAVRRA YG
Sbjct: 63 KGRRIRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLR++ME+GAKGCEV++SGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGV
Sbjct: 123 VLRYVMEAGAKGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDCATRHVLLRQGV 182
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATA--TSIELPV 231
LG+KVKIML + K +Q + LPD V + KEE AP T T + PV
Sbjct: 183 LGVKVKIMLP-EPKTRQKKS--LPDAVVVLDPKEE---APITEPYTVVNQPV 228
>gi|28189605|dbj|BAC56417.1| similar to ribosomal protein S3 [Bos taurus]
Length = 206
Score = 322 bits (826), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 164/188 (87%), Positives = 169/188 (89%), Gaps = 1/188 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 V-LGIKVK 187
V KVK
Sbjct: 181 VAWAFKVK 188
>gi|399216964|emb|CCF73651.1| unnamed protein product [Babesia microti strain RI]
Length = 218
Score = 322 bits (825), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 157/215 (73%), Positives = 183/215 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
QISKK KF+ DG+F AELNE L+R LAEDGYSGVEVR TPV+TE+IIRATRT+ VLGEK
Sbjct: 4 AQISKKCKFINDGIFHAELNEFLSRSLAEDGYSGVEVRATPVKTEVIIRATRTREVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS+VQKRF F +SVELYAE++ +RGLCA+AQAESLRYKLL GLAVRRA YGV
Sbjct: 64 GRRIRELTSLVQKRFGFAPDSVELYAERIEHRGLCAMAQAESLRYKLLKGLAVRRAAYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LR IMESGA GCE+I+SGKLRAQRAKSMKFKDGY+IS+G+P +YI+SA R V LRQGVL
Sbjct: 124 LRHIMESGANGCEIIISGKLRAQRAKSMKFKDGYLISTGEPSKQYINSATRSVQLRQGVL 183
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
G+KVKIML D +GK+GP +PD +T+ K E+
Sbjct: 184 GVKVKIMLPHDPEGKRGPKAIIPDSITVLEPKPEL 218
>gi|346466617|gb|AEO33153.1| hypothetical protein [Amblyomma maculatum]
Length = 254
Score = 322 bits (824), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 161/198 (81%), Positives = 173/198 (87%)
Query: 19 AELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFK 78
AELNE L RELAEDGYSGVEVRVTP TEIII ATRTQ+VLGEKGRRIRELTSVVQKRF
Sbjct: 31 AELNEFLRRELAEDGYSGVEVRVTPQNTEIIILATRTQSVLGEKGRRIRELTSVVQKRFN 90
Query: 79 FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
FPE +VELYAEKV +RGLCAIAQ ESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+V
Sbjct: 91 FPEGTVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVV 150
Query: 139 SGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQ 198
SGKLR QRAKSMKF DG MI SG+P N+Y+++AVRHVLLRQGVLGIKVKIML D GK
Sbjct: 151 SGKLRGQRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQGVLGIKVKIMLPCDPNGKL 210
Query: 199 GPTTPLPDLVTIHPLKEE 216
GP PLPD V+I K+E
Sbjct: 211 GPKKPLPDHVSIMEPKKE 228
>gi|429329723|gb|AFZ81482.1| 40S ribosomal protein S3, putative [Babesia equi]
Length = 218
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/205 (77%), Positives = 176/205 (85%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SK++KF+ DGVF AELNE L R LAEDGYSGVE+R+TPVRTEIIIRATRT+ VLGEK RR
Sbjct: 8 SKQKKFINDGVFNAELNEFLARTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 67
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLAVRRA YGVLR
Sbjct: 68 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAVRRAAYGVLRH 127
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY+IS+GQP Y+ +AVR V LRQGVLGIK
Sbjct: 128 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQAYVSTAVRSVQLRQGVLGIK 187
Query: 186 VKIMLEWDQKGKQGPTTPLPDLVTI 210
VKIM D G+ GPT LPD +T+
Sbjct: 188 VKIMHPHDPDGRIGPTMILPDNITV 212
>gi|17554770|ref|NP_498349.1| Protein RPS-3 [Caenorhabditis elegans]
gi|1350989|sp|P48152.1|RS3_CAEEL RecName: Full=40S ribosomal protein S3
gi|351050702|emb|CCD65297.1| Protein RPS-3 [Caenorhabditis elegans]
Length = 247
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/213 (74%), Positives = 178/213 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI AVRHV LRQGV+GI
Sbjct: 127 FIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGI 186
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
KVKIML +D +G+ GP LPD V I +EEV
Sbjct: 187 KVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEV 219
>gi|219114717|ref|XP_002178154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409889|gb|EEC49819.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 253
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/212 (74%), Positives = 179/212 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S KRKFVADGVF+AELNE+LT ELAE+GY+GVEVR TP RTE+IIRATRTQNVLGE R
Sbjct: 1 MSVKRKFVADGVFYAELNELLTAELAEEGYAGVEVRTTPHRTELIIRATRTQNVLGENNR 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF F + +VELYAE+V NRGLCA AQAESL++KLLGGLAVRRACYGV+R
Sbjct: 61 RIRELTSVVQKRFNFADGAVELYAERVQNRGLCAQAQAESLKFKLLGGLAVRRACYGVVR 120
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F+ME+ AKGCEV+V+GKLR QRAK MKF DGYMI +G Y DSAVRHVL+RQGV+GI
Sbjct: 121 FVMEAQAKGCEVVVTGKLRGQRAKGMKFGDGYMIKTGHAGQVYTDSAVRHVLMRQGVIGI 180
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KV IML D KG+ GP PL D+VTI KEE
Sbjct: 181 KVSIMLPQDPKGQMGPKIPLDDVVTILEPKEE 212
>gi|268569106|ref|XP_002648176.1| C. briggsae CBR-RPS-3 protein [Caenorhabditis briggsae]
Length = 247
Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/213 (74%), Positives = 177/213 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI AVRHV LRQGV+GI
Sbjct: 127 FIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGI 186
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
KVKIML +D +G GP LPD V I +EEV
Sbjct: 187 KVKIMLPYDPRGMNGPRNALPDHVQIMEPQEEV 219
>gi|149068849|gb|EDM18401.1| rCG40478, isoform CRA_k [Rattus norvegicus]
Length = 201
Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 159/179 (88%), Positives = 164/179 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
>gi|225682378|gb|EEH20662.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb03]
Length = 261
Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 163/220 (74%), Positives = 179/220 (81%), Gaps = 10/220 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II LGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDII---------LGEQGR 58
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 59 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQPV ++IDSA RHVLLRQGVLGI
Sbjct: 119 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
KVKIM D +GK GP LPD VT I P +EE + P +
Sbjct: 179 KVKIMRGSDPEGKSGPQKSLPDSVTIIDPKEEEPVLHPIS 218
>gi|341895059|gb|EGT50994.1| CBN-RPS-3 protein [Caenorhabditis brenneri]
Length = 246
Score = 320 bits (819), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 158/213 (74%), Positives = 178/213 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI AVRHV LRQGV+GI
Sbjct: 127 FIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGI 186
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
KVKIML +D +G+ GP LPD V I ++EV
Sbjct: 187 KVKIMLPYDPRGQNGPKIALPDHVQILEPQDEV 219
>gi|209489412|gb|ACI49174.1| hypothetical protein Csp3_JD02.002 [Caenorhabditis angaria]
Length = 247
Score = 319 bits (818), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 161/234 (68%), Positives = 186/234 (79%), Gaps = 6/234 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V +G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 LTKKKKAVQNGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+ELTSVVQKRF F E SVEL+AEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELFAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI AVRHV LRQGV+GI
Sbjct: 127 FIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGI 186
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATA-----TSIELPVA 232
KVKIML +D +G+ GP LPD V I P+ E + P + I++P A
Sbjct: 187 KVKIMLPYDPRGQNGPRNALPDHVQIEDPVDEVLPTEPHSQHKEEKKDIQIPPA 240
>gi|452988654|gb|EME88409.1| hypothetical protein MYCFIDRAFT_70441 [Pseudocercospora fijiensis
CIRAD86]
Length = 273
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/225 (71%), Positives = 182/225 (80%), Gaps = 5/225 (2%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 14 NISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 73
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS++ RFKFP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRRACYGVL
Sbjct: 74 RRIRELTSLITHRFKFPPDSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVL 133
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGVLG
Sbjct: 134 RFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLG 193
Query: 184 IKVKIMLEW----DQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
IKVKIM D G++ LPD VT I P +E+ +AP++
Sbjct: 194 IKVKIMRASSSPNDPSGEKAGGKGLPDSVTIIEPKEEQPILAPSS 238
>gi|263173249|gb|ACY69890.1| S3e ribosomal protein [Cimex lectularius]
Length = 221
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/206 (74%), Positives = 172/206 (83%)
Query: 15 GVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQ 74
GV AELNE LTRELAE+GYSG+E+R+TP RTEIII AT TQNVLGEKG+RIR LTSV+Q
Sbjct: 1 GVLKAELNEFLTRELAEEGYSGIEMRMTPARTEIIIMATSTQNVLGEKGKRIRALTSVIQ 60
Query: 75 KRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
KRF+F E ++LY EKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIME+GAKGC
Sbjct: 61 KRFQFAEGKLDLYTEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMENGAKGC 120
Query: 135 EVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQ 194
E++VSGKLR QRAKSMKF DG MI SG P NEY+DSA RHVLLRQGVLG+KVKIML WD
Sbjct: 121 EIVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDSATRHVLLRQGVLGVKVKIMLPWDT 180
Query: 195 KGKQGPTTPLPDLVTIHPLKEEVYVA 220
GK G PLPD V + KEE ++
Sbjct: 181 LGKIGLKKPLPDNVCVCDPKEETVIS 206
>gi|453089728|gb|EMF17768.1| ribosomal protein S3 [Mycosphaerella populorum SO2202]
Length = 276
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/225 (71%), Positives = 182/225 (80%), Gaps = 5/225 (2%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 14 NISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 73
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS++ RF+FP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRRACYGVL
Sbjct: 74 RRIRELTSLITHRFRFPPDSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVL 133
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGVLG
Sbjct: 134 RFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLG 193
Query: 184 IKVKIMLEW----DQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
IKVKIM D G++ LPD VT I P +E+ +AP++
Sbjct: 194 IKVKIMRASSSPNDPAGEKAGGKGLPDSVTIIEPKEEQPILAPSS 238
>gi|78190549|gb|ABB29596.1| ribosomal protein 3 small subunit [Platynereis dumerilii]
Length = 188
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 157/188 (83%), Positives = 165/188 (87%)
Query: 29 LAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYA 88
LAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELTSVVQKRF F E +VELYA
Sbjct: 1 LAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFQEGTVELYA 60
Query: 89 EKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAK 148
EKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAK
Sbjct: 61 EKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAK 120
Query: 149 SMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLV 208
SMKF DG MI SG P N+Y+D+AVRHVLLRQGVLGIKVKIML WD GK GP PLPD V
Sbjct: 121 SMKFVDGLMIHSGDPTNDYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKRPLPDHV 180
Query: 209 TIHPLKEE 216
+I +EE
Sbjct: 181 SIVEPQEE 188
>gi|398398591|ref|XP_003852753.1| hypothetical protein MYCGRDRAFT_42422 [Zymoseptoria tritici IPO323]
gi|339472634|gb|EGP87729.1| hypothetical protein MYCGRDRAFT_42422 [Zymoseptoria tritici IPO323]
Length = 265
Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 160/225 (71%), Positives = 181/225 (80%), Gaps = 5/225 (2%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 5 NISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS++ RFKFP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRRACYGVL
Sbjct: 65 RRIRELTSLITHRFKFPADSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVL 124
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGVLG
Sbjct: 125 RFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLG 184
Query: 184 IKVKIM----LEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
IKVKIM D G++ LPD VT I P +E+ +AP++
Sbjct: 185 IKVKIMRASSTPGDPAGEKSGGKGLPDSVTIIEPKEEQPILAPSS 229
>gi|339240791|ref|XP_003376321.1| 40S ribosomal protein S3-A [Trichinella spiralis]
gi|316974969|gb|EFV58434.1| 40S ribosomal protein S3-A [Trichinella spiralis]
Length = 330
Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/212 (75%), Positives = 173/212 (81%), Gaps = 2/212 (0%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
S K+KF+ADGVF AELN RELAEDGYSGVEVR TP +TEIII ATRTQNVLGEKGRR
Sbjct: 100 SIKKKFIADGVFKAELNNFFMRELAEDGYSGVEVRKTPRKTEIIIMATRTQNVLGEKGRR 159
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELTS+VQKRF PE S LYAEKV RGLCAIAQ ESLR+KL+GGL VRRACYG+LR+
Sbjct: 160 IRELTSLVQKRFNLPEES--LYAEKVAQRGLCAIAQCESLRFKLIGGLPVRRACYGILRY 217
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMES AKGCEVIVSGKLR QRAKSMKF DG MI SG P NEY++ VRHV+LRQGV+GIK
Sbjct: 218 IMESQAKGCEVIVSGKLRGQRAKSMKFVDGLMIHSGDPTNEYVEKGVRHVVLRQGVIGIK 277
Query: 186 VKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
VKIML D KG GP PLPD V + KEE+
Sbjct: 278 VKIMLPHDPKGVYGPKKPLPDSVVVFEPKEEI 309
>gi|428179210|gb|EKX48082.1| small subunit ribosomal protein S3e, cytoplasmic [Guillardia theta
CCMP2712]
Length = 249
Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 180/212 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGV +AELNE+L ELAEDGYSGVE+R TP+RTEIIIRATRT+ VLGEKG+
Sbjct: 6 ISKKRKFVQDGVLYAELNEMLMHELAEDGYSGVEIRRTPMRTEIIIRATRTREVLGEKGQ 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS VQKRF F E +VE++AE+V+NRGL A+AQAESL++KLLGGL VRRACYGV+R
Sbjct: 66 RIRELTSAVQKRFGFAEGTVEMFAERVHNRGLSAMAQAESLKFKLLGGLQVRRACYGVIR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F+MESGA G EVIVSGK R QRAKSMKFK G++I++G+P +ID A RHV+++QGVLGI
Sbjct: 126 FVMESGALGVEVIVSGKARVQRAKSMKFKSGFLITTGRPAQVFIDKATRHVMMKQGVLGI 185
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
++KIML D +GK GP TP PD VTI KE+
Sbjct: 186 RLKIMLPHDPEGKNGPKTPFPDTVTILDPKED 217
>gi|164658119|ref|XP_001730185.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966]
gi|159104080|gb|EDP42971.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966]
Length = 264
Score = 315 bits (808), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 154/228 (67%), Positives = 183/228 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVF AELNE TRELA +GYSG VRV VRTEIIIRAT TQ VLG+KGR
Sbjct: 6 ISKKRKFVADGVFTAELNEFFTRELAAEGYSGCLVRVNHVRTEIIIRATHTQEVLGDKGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
R+RELT++V++RF+FPE S+ELYAEKV NRGL A+AQ ESLR KLLGGL VRRA YGVLR
Sbjct: 66 RLRELTTLVRQRFRFPEGSLELYAEKVANRGLHAVAQCESLRNKLLGGLPVRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV++SGK+R RAKSMKF DG+MI +GQP +++D A+RHVL++QGVLG+
Sbjct: 126 YVMESGAKGCEVVISGKVRGARAKSMKFNDGFMIHTGQPAKDFVDVAIRHVLMKQGVLGL 185
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELPVA 232
KVKIM WD +G+ G PLPD VTI KE+ + + S PVA
Sbjct: 186 KVKIMHGWDPEGRSGRPFPLPDAVTILEPKEDEPITAPMSESRNQPVA 233
>gi|268619106|gb|ACZ13329.1| 40S ribosomal protein S3 [Bursaphelenchus xylophilus]
Length = 272
Score = 315 bits (807), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 160/218 (73%), Positives = 175/218 (80%), Gaps = 1/218 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
I+KK+K V DGVF AELN L +ELAEDGY+GVEVR P RTE+II ATRTQNVLGE+GR
Sbjct: 27 ITKKKKAVQDGVFKAELNNFLMKELAEDGYAGVEVRRAPTRTEVIITATRTQNVLGERGR 86
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+VVQKRF F VELYAEKV NRGLCA+AQ ESLR+KL GGLAVRRACYGVLR
Sbjct: 87 RIRELTAVVQKRFGFNVGQVELYAEKVANRGLCAVAQCESLRFKLCGGLAVRRACYGVLR 146
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMES AKGCE+IVSGKLR QRAK+MKF DG MI SG PVNEY+ AVRHV LRQGVLGI
Sbjct: 147 FIMESQAKGCEIIVSGKLRGQRAKAMKFVDGIMIHSGHPVNEYVQQAVRHVQLRQGVLGI 206
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAP 221
KVKIML D +GK GP PLPD + I P E+ P
Sbjct: 207 KVKIMLPHDPEGKIGPRNPLPDHIQILEPRPEDNPTVP 244
>gi|71017745|ref|XP_759103.1| hypothetical protein UM02956.1 [Ustilago maydis 521]
gi|46098895|gb|EAK84128.1| hypothetical protein UM02956.1 [Ustilago maydis 521]
Length = 239
Score = 315 bits (807), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 159/229 (69%), Positives = 181/229 (79%), Gaps = 11/229 (4%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKFP+NS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRA YG
Sbjct: 63 KGRRIRELTALVQKRFKFPDNSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRF+MESGAKGCEV++SGKLRA RAKSMKF D +++D AVRHVL++QGV
Sbjct: 123 VLRFVMESGAKGCEVVISGKLRAARAKSMKFTD-----------DFVDEAVRHVLMKQGV 171
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELP 230
LGIKVKIM WD +G+ G PLPD VTI KEE ++ + S P
Sbjct: 172 LGIKVKIMQGWDPEGRAGKPFPLPDAVTILEPKEEAPISAPVSESRNAP 220
>gi|452848046|gb|EME49978.1| hypothetical protein DOTSEDRAFT_122074 [Dothistroma septosporum
NZE10]
Length = 266
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/225 (70%), Positives = 181/225 (80%), Gaps = 5/225 (2%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 5 NISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS++ RF+FP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRRACYGVL
Sbjct: 65 RRIRELTSLITHRFRFPPDSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVL 124
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGVLG
Sbjct: 125 RFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLG 184
Query: 184 IKVKIM----LEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
IKVKIM D G++ LPD VT I P +E+ +AP++
Sbjct: 185 IKVKIMRASSSPGDPSGEKAGGKGLPDSVTIIEPKEEQPILAPSS 229
>gi|308498826|ref|XP_003111599.1| CRE-RPS-3 protein [Caenorhabditis remanei]
gi|308239508|gb|EFO83460.1| CRE-RPS-3 protein [Caenorhabditis remanei]
Length = 255
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 159/221 (71%), Positives = 178/221 (80%), Gaps = 8/221 (3%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVE--------LYAEKVNNRGLCAIAQAESLRYKLLGGLAVR 116
RI+ELTSVVQKRF F E SVE LYAEKV+NRGLCA+AQ ESLRYKL+GGLAVR
Sbjct: 67 RIKELTSVVQKRFAFEEGSVEVKFSFRNLLYAEKVSNRGLCAVAQCESLRYKLVGGLAVR 126
Query: 117 RACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVL 176
RACYGVLRFIMESGA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI AVRHV
Sbjct: 127 RACYGVLRFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQ 186
Query: 177 LRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
LRQGV+GIKVKIML +D +G+ GP LPD V I +EEV
Sbjct: 187 LRQGVIGIKVKIMLPYDPRGQNGPRIALPDHVQIVEPQEEV 227
>gi|449304480|gb|EMD00487.1| hypothetical protein BAUCODRAFT_99745 [Baudoinia compniacensis UAMH
10762]
Length = 282
Score = 312 bits (800), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 158/222 (71%), Positives = 178/222 (80%), Gaps = 5/222 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 16 VSKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 75
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++ RF+FP SV LYA KV +RGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 76 RIRELTSLITHRFRFPPESVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 135
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGVLGI
Sbjct: 136 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAVDFIDHATRHVLLRQGVLGI 195
Query: 185 KVKIM----LEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAP 221
KVKIM D G++ LPD VT I P +E+ +AP
Sbjct: 196 KVKIMRASSSPSDPAGEKAGGKGLPDSVTIIEPKEEQPIMAP 237
>gi|401623905|gb|EJS41984.1| rps3p [Saccharomyces arboricola H-6]
Length = 240
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/223 (69%), Positives = 186/223 (83%), Gaps = 3/223 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPA 222
VLGIKVKIM + K + GP LPD VTI P +EE +AP+
Sbjct: 181 VLGIKVKIMRD-PAKSRTGPKA-LPDAVTIVEPKEEEPILAPS 221
>gi|406867161|gb|EKD20200.1| ribosomal protein S3 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 319
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 158/220 (71%), Positives = 172/220 (78%), Gaps = 14/220 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVFFAELNE RELAE+GY IIRAT TQ VLGE+GR
Sbjct: 82 ISKRRKFVADGVFFAELNEFFQRELAEEGY-------------FIIRATHTQEVLGEQGR 128
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 129 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 188
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++ID A RHVLLRQGVLGI
Sbjct: 189 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGI 248
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT 223
KVKIM D +GK GP LPD VT I P +E+ V P +
Sbjct: 249 KVKIMRGSDPEGKSGPQKTLPDSVTVIEPKEEQSVVQPMS 288
>gi|398364505|ref|NP_014221.3| ribosomal 40S subunit protein S3 [Saccharomyces cerevisiae S288c]
gi|1173255|sp|P05750.5|RS3_YEAST RecName: Full=40S ribosomal protein S3; AltName: Full=RP13;
AltName: Full=YS3
gi|313103665|pdb|3IZB|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|315113450|pdb|3O2Z|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The First 80s In The Asymmetric Unit.
gi|315113478|pdb|3O30|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|364506099|pdb|3U5C|D Chain D, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
gi|364506137|pdb|3U5G|D Chain D, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
gi|457164|dbj|BAA04973.1| ribosomal protein YS3 [Saccharomyces cerevisiae]
gi|1302158|emb|CAA96070.1| RPS3 [Saccharomyces cerevisiae]
gi|1463121|gb|AAC49380.1| ribosomal protein S3 [Saccharomyces cerevisiae]
gi|151944361|gb|EDN62639.1| ribosomal protein S3 [Saccharomyces cerevisiae YJM789]
gi|190409159|gb|EDV12424.1| ribosomal protein S3 [Saccharomyces cerevisiae RM11-1a]
gi|207341817|gb|EDZ69765.1| YNL178Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270755|gb|EEU05916.1| Rps3p [Saccharomyces cerevisiae JAY291]
gi|259149181|emb|CAY82423.1| Rps3p [Saccharomyces cerevisiae EC1118]
gi|285814479|tpg|DAA10373.1| TPA: ribosomal 40S subunit protein S3 [Saccharomyces cerevisiae
S288c]
gi|323331906|gb|EGA73318.1| Rps3p [Saccharomyces cerevisiae AWRI796]
gi|323335912|gb|EGA77190.1| Rps3p [Saccharomyces cerevisiae Vin13]
gi|323346843|gb|EGA81122.1| Rps3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352903|gb|EGA85205.1| Rps3p [Saccharomyces cerevisiae VL3]
gi|349580763|dbj|GAA25922.1| K7_Rps3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763526|gb|EHN05054.1| Rps3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296815|gb|EIW07916.1| Rps3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 240
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/223 (69%), Positives = 186/223 (83%), Gaps = 3/223 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPA 222
VLGIKVKIM + K + GP LPD VT I P +EE +AP+
Sbjct: 181 VLGIKVKIMRD-PAKSRTGPKA-LPDAVTIIEPKEEEPILAPS 221
>gi|401839576|gb|EJT42741.1| RPS3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 240
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/223 (69%), Positives = 186/223 (83%), Gaps = 3/223 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPA 222
VLGIKVKIM + K + GP LPD VT I P +EE +AP+
Sbjct: 181 VLGIKVKIMRD-PAKSRTGPKA-LPDAVTIIEPKEEEQILAPS 221
>gi|366995337|ref|XP_003677432.1| hypothetical protein NCAS_0G01920 [Naumovozyma castellii CBS 4309]
gi|342303301|emb|CCC71079.1| hypothetical protein NCAS_0G01920 [Naumovozyma castellii CBS 4309]
Length = 244
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/223 (69%), Positives = 184/223 (82%), Gaps = 3/223 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL AIAQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAIAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFSDGFLIHSGQPVNDFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPA 222
VLGIKVKIM + K GP LPD VTI P EE +AP+
Sbjct: 181 VLGIKVKIMRD-PATAKTGPRA-LPDAVTIVEPKDEEPVLAPS 221
>gi|410075477|ref|XP_003955321.1| hypothetical protein KAFR_0A07520 [Kazachstania africana CBS 2517]
gi|372461903|emb|CCF56186.1| hypothetical protein KAFR_0A07520 [Kazachstania africana CBS 2517]
Length = 241
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/222 (70%), Positives = 182/222 (81%), Gaps = 3/222 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL AIAQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAIAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+RF+MESGAKGCEV+VSGKLRA RAKSMKF DG++I SGQPVN++ID A RHVL+RQG
Sbjct: 121 GVVRFVMESGAKGCEVVVSGKLRAARAKSMKFADGFLIHSGQPVNDFIDIATRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAP 221
VLGIKVKIM + + K GPT LPD V+I P EE P
Sbjct: 181 VLGIKVKIMRD-PSRNKVGPTA-LPDAVSIVEPKDEERVTQP 220
>gi|156084414|ref|XP_001609690.1| 40S ribosomal protein S3 protein [Babesia bovis T2Bo]
gi|154796942|gb|EDO06122.1| 40S ribosomal protein S3 protein, putative [Babesia bovis]
Length = 223
Score = 310 bits (794), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/208 (73%), Positives = 177/208 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T+ S RKF+ DGVF AELNE L+R LAEDGYSGVE+R+TPVRTEIIIRATR + V+GEK
Sbjct: 5 TRKSMCRKFIGDGVFNAELNEFLSRVLAEDGYSGVELRITPVRTEIIIRATRAREVVGEK 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RRIRELTS++QKRF F ++VELYAE+V ++GLCA+AQAESLRYKLL GLAVRRA YGV
Sbjct: 65 ARRIRELTSLIQKRFGFSPDTVELYAERVEHKGLCAMAQAESLRYKLLKGLAVRRAAYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LR IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY+IS+GQP ++ SA R V LRQGVL
Sbjct: 125 LRHIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYLISTGQPAKTFVTSATRSVQLRQGVL 184
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
GIKVKIM D +G+ GP+T +PD +T+
Sbjct: 185 GIKVKIMHPHDPEGRLGPSTVMPDTITV 212
>gi|367008326|ref|XP_003678663.1| 40S ribosomal protein S3 [Torulaspora delbrueckii]
gi|359746320|emb|CCE89452.1| hypothetical protein TDEL_0A01200 [Torulaspora delbrueckii]
Length = 245
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 157/228 (68%), Positives = 185/228 (81%), Gaps = 5/228 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYKPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAKSMKF DG++I SGQPVN++ID+A RHVLLRQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKSMKFADGFLIHSGQPVNDFIDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIE 228
VLGIKVKIM + Q + GP LPD V I KEE P A S++
Sbjct: 181 VLGIKVKIMRDPAQ-SRTGPKA-LPDAVKIVEPKEE---EPILAASVK 223
>gi|363754787|ref|XP_003647609.1| hypothetical protein Ecym_6420 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891246|gb|AET40792.1| hypothetical protein Ecym_6420 [Eremothecium cymbalariae
DBVPG#7215]
Length = 328
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 155/223 (69%), Positives = 183/223 (82%), Gaps = 3/223 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP TE+IIRATRTQ+VLG
Sbjct: 85 MVTVISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTTTEVIIRATRTQDVLG 144
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ L+AE+V RGL A+AQAESL++KLL GLA+RRA Y
Sbjct: 145 ENGRRINELTLLVQKRFKYQPGTIVLFAERVQERGLSAVAQAESLKFKLLNGLAIRRAAY 204
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV++SGKLRA RAKSMKF DG++I SGQPVN++ID+A RHVLLRQG
Sbjct: 205 GVVRYVMESGAKGCEVVISGKLRAARAKSMKFSDGFLIHSGQPVNDFIDTATRHVLLRQG 264
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLV-TIHPLKEEVYVAPA 222
VLGIKVKIM + K + GPT LPD V I P E+V P+
Sbjct: 265 VLGIKVKIMKD-PSKARTGPTA-LPDAVEIIEPKDEDVVKEPS 305
>gi|365758790|gb|EHN00617.1| Rps3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 240
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 153/223 (68%), Positives = 185/223 (82%), Gaps = 3/223 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPA 222
VLGIKVKIM + K + GP LPD VT I P +EE + P+
Sbjct: 181 VLGIKVKIMRD-PAKSRTGPKA-LPDAVTIIEPKEEEQILTPS 221
>gi|215260017|gb|ACJ64493.1| 40S ribosomal protein S3 [Culex tarsalis]
Length = 221
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 154/193 (79%), Positives = 163/193 (84%), Gaps = 1/193 (0%)
Query: 30 AEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAE 89
AEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF F +VELYAE
Sbjct: 1 AEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPGTVELYAE 60
Query: 90 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKS 149
KV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR Q AKS
Sbjct: 61 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQCAKS 120
Query: 150 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVT 209
MKF DG MI SG P NEY+D+A RHVLLRQGVLGIKVKIML WD GK GP PLPD V+
Sbjct: 121 MKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPKKPLPDNVS 180
Query: 210 -IHPLKEEVYVAP 221
+ P E +Y P
Sbjct: 181 VVEPKDEIMYSTP 193
>gi|444317298|ref|XP_004179306.1| hypothetical protein TBLA_0B09710 [Tetrapisispora blattae CBS 6284]
gi|387512346|emb|CCH59787.1| hypothetical protein TBLA_0B09710 [Tetrapisispora blattae CBS 6284]
Length = 248
Score = 309 bits (792), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 154/219 (70%), Positives = 184/219 (84%), Gaps = 3/219 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ VLGE GR
Sbjct: 13 ISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQEVLGENGR 72
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELT +VQKRFK+ SV LYAE++ +RGL A+AQAES+++KLL GLA+RRA YGV+R
Sbjct: 73 RINELTLLVQKRFKYKAGSVVLYAERIQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVR 132
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQGVLGI
Sbjct: 133 YVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGI 192
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPA 222
KVKIM + + + GP + LPD V I P +EE VAP+
Sbjct: 193 KVKIMRD-PARARFGPRS-LPDAVKIVEPKEEETIVAPS 229
>gi|189308068|gb|ACD86918.1| ribosomal protein S3 [Caenorhabditis brenneri]
Length = 205
Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 151/197 (76%), Positives = 169/197 (85%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+G
Sbjct: 6 NVTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERG 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVL
Sbjct: 66 RRIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI AVRHV LRQGV+G
Sbjct: 126 RFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIG 185
Query: 184 IKVKIMLEWDQKGKQGP 200
IKVKIML +D +G+ GP
Sbjct: 186 IKVKIMLPYDPRGQNGP 202
>gi|156840842|ref|XP_001643799.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156114424|gb|EDO15941.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 234
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/223 (69%), Positives = 184/223 (82%), Gaps = 3/223 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ+VLG
Sbjct: 1 MVAFISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFKF ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKFKPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPA 222
VLGIKVKIM + + K GP LPD VTI P +EE + P+
Sbjct: 181 VLGIKVKIMRD-PARSKVGPRA-LPDAVTIVEPKEEEKILVPS 221
>gi|365988130|ref|XP_003670896.1| hypothetical protein NDAI_0F03350 [Naumovozyma dairenensis CBS 421]
gi|343769667|emb|CCD25653.1| hypothetical protein NDAI_0F03350 [Naumovozyma dairenensis CBS 421]
Length = 243
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/223 (69%), Positives = 183/223 (82%), Gaps = 3/223 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL AIAQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYTPGTIVLYAERVQDRGLSAIAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPV ++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVKDFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPA 222
VLGIKVKIM + K GP LPD VTI P EE +AP+
Sbjct: 181 VLGIKVKIMRD-PATAKTGPRA-LPDAVTIVEPKDEEPILAPS 221
>gi|241865275|gb|ACS68715.1| 40S RPS3B [Sonneratia alba]
gi|241865508|gb|ACS68786.1| RPS3B [Sonneratia alba]
Length = 156
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/156 (96%), Positives = 154/156 (98%)
Query: 44 VRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAE 103
+RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAE
Sbjct: 1 MRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAE 60
Query: 104 SLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 163
SLRYKLLGGLAVRRACYGVLRF+M+SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP
Sbjct: 61 SLRYKLLGGLAVRRACYGVLRFVMDSGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 120
Query: 164 VNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQG 199
VNEYIDSAVRHVLLRQGVLGIKVKIML+WD KGKQG
Sbjct: 121 VNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQG 156
>gi|255711614|ref|XP_002552090.1| 40S ribosomal protein S3 [Lachancea thermotolerans]
gi|238933468|emb|CAR21652.1| KLTH0B06974p [Lachancea thermotolerans CBS 6340]
Length = 248
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/219 (69%), Positives = 181/219 (82%), Gaps = 2/219 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVAVISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ S+ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYQAGSIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV++SGKLRA RAKSMKF DG++I SGQPV ++ID+A RHVLLRQG
Sbjct: 121 GVVRYVMESGAKGCEVVISGKLRAARAKSMKFADGFLIHSGQPVADFIDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV 219
VLGIKVKIM + + + GP LPD V I KEE YV
Sbjct: 181 VLGIKVKIMRD-PARNRVGPKA-LPDAVKILEPKEEEYV 217
>gi|468426|gb|AAA35010.1| ribosomal protein S3 [Saccharomyces cerevisiae]
Length = 240
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/223 (68%), Positives = 185/223 (82%), Gaps = 3/223 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGV +AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVNYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPA 222
VLGIKVKIM + K + GP LPD VT I P +EE +AP+
Sbjct: 181 VLGIKVKIMRD-PAKSRTGPKA-LPDAVTIIEPKEEEPILAPS 221
>gi|50553820|ref|XP_504321.1| 40S ribosomal protein S3 [Yarrowia lipolytica]
gi|49650190|emb|CAG79920.1| YALI0E23694p [Yarrowia lipolytica CLIB122]
Length = 246
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/216 (68%), Positives = 176/216 (81%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAE+GYSGVEVR+TP +TEI++RAT T VLGE GR
Sbjct: 7 ISKKRKIVADGVFYAELNEFFTRELAEEGYSGVEVRLTPTKTEIVVRATHTNKVLGENGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIREL S+VQKRF+ PE SV +YAE+V RGL A+AQ ES++YKLL GLA+RRA YGV+R
Sbjct: 67 RIRELMSLVQKRFRLPEGSVTIYAERVQERGLSAVAQCESVKYKLLNGLAIRRAAYGVVR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
++M++GAKG EV+VSGKLRA RAKSMKF DG+MI SGQPVN++ID+A RHVLLRQGVLG+
Sbjct: 127 YVMDAGAKGVEVVVSGKLRAARAKSMKFADGFMIHSGQPVNDFIDTATRHVLLRQGVLGV 186
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVA 220
KVKIM + K G LPD VTI KE+ VA
Sbjct: 187 KVKIMRDPATSKKPGVPKSLPDAVTIFEPKEDAVVA 222
>gi|302306412|ref|NP_982809.2| 40S ribosomal protein S3 [Ashbya gossypii ATCC 10895]
gi|299788504|gb|AAS50633.2| ABL138Wp [Ashbya gossypii ATCC 10895]
gi|374106011|gb|AEY94921.1| FABL138Wp [Ashbya gossypii FDAG1]
Length = 244
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/223 (69%), Positives = 181/223 (81%), Gaps = 3/223 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP TE+IIRATRTQ+VLG
Sbjct: 1 MVAVISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTTTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ L+AE+V RGL A+AQAESLR+KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYQPGTIVLFAERVQERGLSAVAQAESLRFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV++SGKLRA RAKSMKF DG++I SGQPVN++ID+A RHVLLRQG
Sbjct: 121 GVVRYVMESGAKGCEVVISGKLRAARAKSMKFSDGFLIHSGQPVNDFIDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPA 222
VLGIKVKIM + K + GP LPD V I P E+ V P+
Sbjct: 181 VLGIKVKIMKD-PSKSRTGPKA-LPDAVKILEPKDEDAVVEPS 221
>gi|70947163|ref|XP_743223.1| ribosomal protein S3 [Plasmodium chabaudi chabaudi]
gi|56522619|emb|CAH84779.1| ribosomal protein S3, putative [Plasmodium chabaudi chabaudi]
Length = 220
Score = 307 bits (786), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/208 (74%), Positives = 176/208 (84%), Gaps = 1/208 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG+KG
Sbjct: 2 QISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKG 61
Query: 64 RRIRELTSVVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RRIRELTS+VQKRF NSVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGV
Sbjct: 62 RRIRELTSLVQKRFFNKSTNSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGV 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LR IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY+IS+G+P ++++A R L+QGVL
Sbjct: 122 LRHIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYLISTGEPSKRFVNTATRSAQLKQGVL 181
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
GIKVKIML + G + LPD +++
Sbjct: 182 GIKVKIMLPTAIDTRTGLPSILPDNISV 209
>gi|147810849|emb|CAN71792.1| hypothetical protein VITISV_022106 [Vitis vinifera]
Length = 252
Score = 306 bits (785), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 165/248 (66%), Positives = 186/248 (75%), Gaps = 18/248 (7%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGR-----RIRELTSVVQKRFKFPENSVELYAE-KVNNRGLCAIAQAESLRY------- 107
+K + R + ++ + F + + A + + C + E L +
Sbjct: 61 KKDQGADFQWFRRGLNFLKTVWSFMLRKLTIGASVPLLRQSHCDTSFLEDLPFGGKPEIG 120
Query: 108 ----KLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 163
+ L ACYGVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP
Sbjct: 121 HYYCHIRSYLKFSLACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 180
Query: 164 VNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPA 222
V +YIDSAVRHVLLRQGVLGIKVKIML+WD KGKQGPTTPLPDLVTIH P +EE YV P
Sbjct: 181 VKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHXPKEEEEYVPPV 240
Query: 223 TATSIELP 230
T+IE+P
Sbjct: 241 LTTNIEVP 248
>gi|50291535|ref|XP_448200.1| 40S ribosomal protein S3 [Candida glabrata CBS 138]
gi|49527511|emb|CAG61151.1| unnamed protein product [Candida glabrata]
Length = 247
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 151/222 (68%), Positives = 181/222 (81%), Gaps = 3/222 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M + ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVSLISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAP 221
VLGIKVKIM D +G LPD V+I P EE + P
Sbjct: 181 VLGIKVKIM--RDPATNRGGPRALPDAVSIVEPKDEEPVLTP 220
>gi|156100003|ref|XP_001615729.1| 40S ribosomal protein S3 [Plasmodium vivax Sal-1]
gi|221059123|ref|XP_002260207.1| ribosomal protein S3 [Plasmodium knowlesi strain H]
gi|148804603|gb|EDL46002.1| 40S ribosomal protein S3, putative [Plasmodium vivax]
gi|193810280|emb|CAQ41474.1| ribosomal protein S3, putative [Plasmodium knowlesi strain H]
gi|389585194|dbj|GAB67925.1| 40S ribosomal protein S3 [Plasmodium cynomolgi strain B]
Length = 222
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/221 (70%), Positives = 180/221 (81%), Gaps = 1/221 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG
Sbjct: 1 MSAPISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLG 60
Query: 61 EKGRRIRELTSVVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+KGRRIRELTS+VQKRF NSVEL+AE+V +RGLCA+AQAESLRYKLL GLAVRRAC
Sbjct: 61 DKGRRIRELTSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY+IS+G+P ++++A R L+Q
Sbjct: 121 YGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQ 180
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVA 220
GVLGIKVKIML K G + LPD +++ K E A
Sbjct: 181 GVLGIKVKIMLPTAVDSKTGLPSILPDNISVLEPKTETIEA 221
>gi|124810210|ref|XP_001348801.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7]
gi|23497701|gb|AAN37240.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7]
Length = 221
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 153/211 (72%), Positives = 178/211 (84%), Gaps = 1/211 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG
Sbjct: 1 MSAPISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLG 60
Query: 61 EKGRRIRELTSVVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+KGRRIRELTS+VQKRF NSVEL+AE+V +RGLCA+AQAESLRYKLL GLAVRRAC
Sbjct: 61 DKGRRIRELTSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YGVLR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY+IS+G+P ++++A R L+Q
Sbjct: 121 YGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQ 180
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
GVLGIKVKIML + G T+ LPD +++
Sbjct: 181 GVLGIKVKIMLPTAIDTRTGLTSILPDNISV 211
>gi|294877217|ref|XP_002767926.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239869954|gb|EER00644.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 200
Score = 306 bits (783), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 145/190 (76%), Positives = 171/190 (90%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRRA YGVL
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVL 128
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V +RQG+LG
Sbjct: 129 RFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQGILG 188
Query: 184 IKVKIMLEWD 193
I+VKIM+ +D
Sbjct: 189 IRVKIMMAYD 198
>gi|367007661|ref|XP_003688560.1| 40S ribosomal protein S3 [Tetrapisispora phaffii CBS 4417]
gi|357526869|emb|CCE66126.1| hypothetical protein TPHA_0O01590 [Tetrapisispora phaffii CBS 4417]
Length = 238
Score = 306 bits (783), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 151/216 (69%), Positives = 178/216 (82%), Gaps = 2/216 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ VLG
Sbjct: 1 MVAYISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFKF +V LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKFKAGTVVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV++SGKLRA RAK+MK+ DG++I SGQPVN++ID A RHVL+RQG
Sbjct: 121 GVIRYVMESGAKGCEVVISGKLRAARAKAMKYADGFLIHSGQPVNDFIDVATRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGI++KIM + K K GP LPD V I KEE
Sbjct: 181 VLGIRIKIMRD-PSKSKVGPRA-LPDAVNIVEPKEE 214
>gi|391337612|ref|XP_003743161.1| PREDICTED: 40S ribosomal protein S3-like [Metaseiulus occidentalis]
Length = 239
Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/210 (72%), Positives = 172/210 (81%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M QISKKR+FVADGVF AELNE L RELAE+GYSGVEVR +T+III ATRTQ+VLG
Sbjct: 1 MPGQISKKRRFVADGVFNAELNEFLRRELAENGYSGVEVRNGATKTDIIIMATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGR+IRELT+VVQKRF F E +V L+AEKV+ RGLCAI Q ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRKIRELTAVVQKRFGFKEGTVNLFAEKVSARGLCAITQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
VLR IME+ A GCEV+VSGKLR QRAKSMKF +G MI SG P N Y+++AVRHVLL+QG
Sbjct: 121 SVLRCIMEAEAMGCEVVVSGKLRGQRAKSMKFVEGLMIHSGDPTNHYVETAVRHVLLKQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
VLGIKVKIM D GK+GP LPD V +
Sbjct: 181 VLGIKVKIMHPHDPLGKRGPAQLLPDKVHV 210
>gi|68070737|ref|XP_677280.1| ribosomal protein S3 [Plasmodium berghei strain ANKA]
gi|56497334|emb|CAH98166.1| ribosomal protein S3, putative [Plasmodium berghei]
Length = 218
Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 154/208 (74%), Positives = 177/208 (85%), Gaps = 3/208 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG+KGR
Sbjct: 1 ISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKGR 60
Query: 65 RIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RIRELTS+VQKRF F + NSVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGV
Sbjct: 61 RIRELTSLVQKRF-FNKLTNSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGV 119
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY+IS+G+P ++++A R L+QGVL
Sbjct: 120 LRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQGVL 179
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
GIKVKIML K G + LPD +++
Sbjct: 180 GIKVKIMLPTAIDTKTGLPSILPDNISV 207
>gi|254580157|ref|XP_002496064.1| 40S ribosomal protein S3 [Zygosaccharomyces rouxii]
gi|238938955|emb|CAR27131.1| ZYRO0C09636p [Zygosaccharomyces rouxii]
Length = 246
Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 153/223 (68%), Positives = 181/223 (81%), Gaps = 3/223 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSG EVRVTP +TEIIIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGTEVRVTPTKTEIIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 EGGRRINELTLLVQKRFKYKPGTIVLYAERVQERGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAKSMKF DG++I SGQPV ++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKSMKFADGFLIHSGQPVADFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPA 222
VLGIKVKIM + GP LPD VTI P +EE +AP+
Sbjct: 181 VLGIKVKIMRD-PATTPSGPNA-LPDAVTIVDPKEEEPILAPS 221
>gi|403216300|emb|CCK70797.1| hypothetical protein KNAG_0F01290 [Kazachstania naganishii CBS
8797]
Length = 249
Score = 303 bits (775), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 150/216 (69%), Positives = 177/216 (81%), Gaps = 2/216 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ L+AE+V RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLFAERVQERGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
VLGIKVKIM + K GP LPD VTI K+E
Sbjct: 181 VLGIKVKIMRDPATNTK-GPKA-LPDAVTIVEPKDE 214
>gi|254564691|ref|XP_002489456.1| 40S ribosomal protein S3 [Komagataella pastoris GS115]
gi|238029252|emb|CAY67175.1| Protein component of the small (40S) ribosomal subunit
[Komagataella pastoris GS115]
gi|328349885|emb|CCA36285.1| 40S ribosomal protein S3 [Komagataella pastoris CBS 7435]
Length = 243
Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 152/212 (71%), Positives = 173/212 (81%), Gaps = 2/212 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAEDGYSGVEVRVTP TEIIIRAT+T +VLGE GR
Sbjct: 6 ISKKRKLVADGVFYAELNEYFTRELAEDGYSGVEVRVTPTTTEIIIRATQTNSVLGENGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRFK E V LYAE+V +RGL A+ Q ESLRYKLL GLA+RRA YGV+R
Sbjct: 66 RIRELTALVQKRFKIDEGKVILYAERVQDRGLSAVTQCESLRYKLLNGLAIRRAAYGVVR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F+M+SGAKG EV+VSGKLRA RAKSMKF DG+MI SGQP ++I++A RHVLLRQGVLGI
Sbjct: 126 FVMDSGAKGVEVVVSGKLRAARAKSMKFADGFMIHSGQPAKDFIETATRHVLLRQGVLGI 185
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
KVKIM + + GP LPD V IH K+E
Sbjct: 186 KVKIMRD-PAAARTGPKA-LPDFVKIHEPKDE 215
>gi|50306913|ref|XP_453432.1| 40S ribosomal protein S3 [Kluyveromyces lactis NRRL Y-1140]
gi|49642566|emb|CAH00528.1| KLLA0D08305p [Kluyveromyces lactis]
Length = 237
Score = 302 bits (774), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 148/223 (66%), Positives = 184/223 (82%), Gaps = 3/223 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRAT+ Q+V+G
Sbjct: 1 MVAIISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATKVQDVVG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +++KRFK+ ++ LYAE+V++RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLIEKRFKYKRGTIALYAERVHDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV++SGKLRA RAKSMKF DG++I SGQPVN++I++A RHVLLRQG
Sbjct: 121 GVVRYVMESGAKGCEVVISGKLRAARAKSMKFADGFLIHSGQPVNDFIETATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPA 222
VLGIKVKIM + + GP LPD VT I P +EE + P+
Sbjct: 181 VLGIKVKIMKD-PSRNTSGPKA-LPDAVTIIEPKEEEPVLEPS 221
>gi|406603719|emb|CCH44744.1| 40S ribosomal protein [Wickerhamomyces ciferrii]
Length = 246
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/229 (65%), Positives = 184/229 (80%), Gaps = 3/229 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE GY+GVEVRVTP RTE+IIRAT+T VLG
Sbjct: 1 MVNIISKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRVTPTRTEVIIRATQTNAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELTS+VQKRFKF ++ LYAE+V +RGL A+AQAESL++KLL GLA+RRA Y
Sbjct: 61 ENGRRIYELTSLVQKRFKFAPGTIVLYAERVQDRGLSAVAQAESLKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKG EV++SGKLRA RAK+MKF+DG++I SGQPV ++ID+A RHVLLRQG
Sbjct: 121 GVVRYVMESGAKGVEVVISGKLRAARAKAMKFQDGFLIHSGQPVKDFIDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATSIE 228
VLG+KVKIM + + GP + LPD V +H P ++E AP + ++
Sbjct: 181 VLGVKVKIMRD-PATNRVGPKS-LPDYVKVHEPKEDEAIPAPTVKSYVQ 227
>gi|343887316|dbj|BAK61862.1| 40S ribosomal protein S3 [Citrus unshiu]
Length = 184
Score = 298 bits (764), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 153/182 (84%), Positives = 157/182 (86%), Gaps = 9/182 (4%)
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GEKGRRIRELTS VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC
Sbjct: 3 GEKGRRIRELTSAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 62
Query: 120 YGVLRF-IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
GVLRF I+ESGAKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYIDSAVRHVLLR
Sbjct: 63 CGVLRFIILESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLLR 122
Query: 179 Q--------GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELP 230
Q GVLGIKVKIML WD KGKQ P TPLPDLVTIH KEE V P +TS+ELP
Sbjct: 123 QASSIFCGYGVLGIKVKIMLAWDAKGKQRPVTPLPDLVTIHTPKEEENVPPIMSTSLELP 182
Query: 231 VA 232
+A
Sbjct: 183 IA 184
>gi|49258823|pdb|1S1H|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is
In File 1s1i
Length = 192
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 139/185 (75%), Positives = 166/185 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLGE GR
Sbjct: 4 ISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA YGV+R
Sbjct: 64 RINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQGVLGI
Sbjct: 124 YVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGI 183
Query: 185 KVKIM 189
KVKIM
Sbjct: 184 KVKIM 188
>gi|290977385|ref|XP_002671418.1| predicted protein [Naegleria gruberi]
gi|284084987|gb|EFC38674.1| predicted protein [Naegleria gruberi]
Length = 228
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 174/218 (79%), Gaps = 1/218 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
I+KK+ FV G+ +AELNE L RELAEDGYSGVEVR T RTEIIIRATR Q V+G+
Sbjct: 5 ANINKKKHFVHQGLLYAELNEFLKRELAEDGYSGVEVRATVARTEIIIRATRPQTVVGDN 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRR++ELTSV+QKRF F E +ELYAE V N+GL AIAQAESL+ KL+ G+AVR+ACYGV
Sbjct: 65 GRRMKELTSVIQKRFGFEEGKIELYAENVKNKGLSAIAQAESLKQKLMEGVAVRKACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRF+M+SGAKG VIVSGKLRAQRAKSMKF +GYMI +GQPV +Y+D AVRHV ++QGVL
Sbjct: 125 LRFVMDSGAKGGAVIVSGKLRAQRAKSMKFAEGYMIRTGQPVKDYVDIAVRHVYMKQGVL 184
Query: 183 GIKVKIMLEWDQKGKQGPTT-PLPDLVTIHPLKEEVYV 219
GIKVK+ML W + G P PD+V++H KE++ V
Sbjct: 185 GIKVKVMLPWVVGTQAGSNQKPQPDVVSVHEPKEDLSV 222
>gi|78190807|gb|ABB29725.1| ribosomal protein 3 small subunit [Monosiga brevicollis]
Length = 190
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/189 (74%), Positives = 162/189 (85%)
Query: 28 ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87
ELAEDGY+GVE++ TP TEI+I ATRTQ+VLGEKGRRIRELT+ +QKRF F ++ VEL+
Sbjct: 1 ELAEDGYAGVEIKKTPKSTEIVILATRTQHVLGEKGRRIRELTAFIQKRFGFQKDEVELF 60
Query: 88 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRA 147
AEKV NRGLCA+AQ E+LRYKL GGLAVRRACYGV+RF+MESGAKGCEVIVSGKLRAQRA
Sbjct: 61 AEKVANRGLCAVAQCENLRYKLTGGLAVRRACYGVVRFVMESGAKGCEVIVSGKLRAQRA 120
Query: 148 KSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDL 207
K+MKF DG+MISSG P EYID+AVRHV +RQG++GIKVKIML D GK GP PLPD
Sbjct: 121 KAMKFGDGFMISSGNPTREYIDTAVRHVPMRQGMIGIKVKIMLPHDPSGKTGPKAPLPDA 180
Query: 208 VTIHPLKEE 216
+TI KEE
Sbjct: 181 ITILEAKEE 189
>gi|281500809|pdb|3JYV|C Chain C, Structure Of The 40s Rrna And Proteins And PE TRNA FOR
EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces
Lanuginosus Ribosome At 8.9a Resolution
Length = 188
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 138/184 (75%), Positives = 165/184 (89%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLGE GRR
Sbjct: 1 SKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 60
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
I ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA YGV+R+
Sbjct: 61 INELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 120
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 185
+MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQGVLGIK
Sbjct: 121 VMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIK 180
Query: 186 VKIM 189
VKIM
Sbjct: 181 VKIM 184
>gi|78190655|gb|ABB29649.1| ribosomal protein 3 small subunit [Suberites fuscus]
Length = 176
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/176 (82%), Positives = 153/176 (86%)
Query: 35 SGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNR 94
SGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FP+ +VELYAEKV R
Sbjct: 1 SGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFSFPDGTVELYAEKVAAR 60
Query: 95 GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKD 154
GLCAIAQ ESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR QRAKSMKF D
Sbjct: 61 GLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRGQRAKSMKFVD 120
Query: 155 GYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
G+MI SG P EYIDSAV HV LRQGVLGIKVKIML D GK GP PLPD V++
Sbjct: 121 GFMIHSGYPTREYIDSAVTHVHLRQGVLGIKVKIMLPHDPTGKSGPKKPLPDQVSV 176
>gi|358336359|dbj|GAA54888.1| small subunit ribosomal protein S3e [Clonorchis sinensis]
Length = 230
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/214 (69%), Positives = 170/214 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
++S KRKF+ GVF AEL+E L RELAEDGYSGV+VR + TE+II AT+TQ+VLGE
Sbjct: 6 KMSLKRKFIKAGVFKAELDEFLKRELAEDGYSGVQVRESRKYTEVIILATKTQSVLGEGC 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV++KRF F E ++EL AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLEKRFGFAEGTLELCAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAKSMKF DG MI SG PVN YID AVRHVLL QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKSMKFSDGLMIHSGDPVNYYIDKAVRHVLLPQGILG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIM+ D GK GP PLPD VTI KEE
Sbjct: 186 IKVKIMMNHDSSGKTGPRKPLPDTVTILAAKEET 219
>gi|226476708|emb|CAX72246.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476710|emb|CAX72247.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476714|emb|CAX72249.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476718|emb|CAX72251.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476722|emb|CAX72253.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476724|emb|CAX72254.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476726|emb|CAX72255.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476728|emb|CAX72256.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476730|emb|CAX72257.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476732|emb|CAX72258.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476734|emb|CAX72259.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482826|emb|CAX79380.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482828|emb|CAX79381.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482830|emb|CAX79382.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482832|emb|CAX79383.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482834|emb|CAX79384.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482838|emb|CAX79386.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482840|emb|CAX79387.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482842|emb|CAX79388.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482844|emb|CAX79389.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482846|emb|CAX79390.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482848|emb|CAX79391.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482850|emb|CAX79392.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482856|emb|CAX79395.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482858|emb|CAX79396.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482860|emb|CAX79397.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482862|emb|CAX79398.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482866|emb|CAX79400.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482868|emb|CAX79401.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 172/214 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIM++ D GK+GP PLPD VTI KEEV
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEV 219
>gi|328867452|gb|EGG15834.1| 40S ribosomal protein S3 [Dictyostelium fasciculatum]
Length = 219
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/208 (68%), Positives = 165/208 (79%), Gaps = 1/208 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
QISKKRKFVADGVF AELNE+ TRE +D GYSGVE++ P TEI IRA++TQ ++GE
Sbjct: 7 QISKKRKFVADGVFHAELNELFTREFNKDEGYSGVELKQGPASTEITIRASKTQAIVGEN 66
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RR+ EL S+VQKRF F E +V ++AEKV NRGLCA+AQAESL+ KLL GL VRRACY +
Sbjct: 67 ARRVHELCSLVQKRFGFKEGAVTIFAEKVQNRGLCAVAQAESLKIKLLAGLPVRRACYAI 126
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
L +M GAKGCEVIVSGKLRAQRAKSMKF+DGYMI SGQP +++D AVRHVLLRQG L
Sbjct: 127 LHQVMTKGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSQQFVDFAVRHVLLRQGTL 186
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
G+KV IML D GK G T P PD+V I
Sbjct: 187 GVKVAIMLPHDPTGKNGCTIPQPDIVII 214
>gi|189502878|gb|ACE06820.1| unknown [Schistosoma japonicum]
Length = 230
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 172/214 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIM++ D GK+GP PLPD VTI KEEV
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEV 219
>gi|226476720|emb|CAX72252.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 172/214 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTLRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIM++ D GK+GP PLPD VTI KEEV
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEV 219
>gi|29841430|gb|AAP06462.1| similar to GenBank Accession Number AK010678 ribosomal protein S3
in Mus musculus [Schistosoma japonicum]
Length = 226
Score = 293 bits (749), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 172/214 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIM++ D GK+GP PLPD VTI KEEV
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEV 219
>gi|226482836|emb|CAX79385.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 171/214 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPNGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIM++ D GK+GP PLPD VTI KEEV
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEV 219
>gi|226482824|emb|CAX79379.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 172/214 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESL+YKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLKYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIM++ D GK+GP PLPD VTI KEEV
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEV 219
>gi|289724874|gb|ADD18372.1| 40S ribosomal protein S3 [Glossina morsitans morsitans]
Length = 225
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 171/214 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKF+ GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 1 KISLKRKFIKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 60
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF F + ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 61 RRIRELTSVLQKRFGFADGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 120
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN YID AVRHV L QG+LG
Sbjct: 121 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNNYIDKAVRHVQLPQGILG 180
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIML+ D GK+GP PLPD VTI KEEV
Sbjct: 181 IKVKIMLDHDSSGKKGPRKPLPDTVTILAAKEEV 214
>gi|226476736|emb|CAX72260.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 172/214 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG +I SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLLIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIM++ D GK+GP PLPD VTI KEEV
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEV 219
>gi|256075800|ref|XP_002574204.1| 40S ribosomal protein S3 [Schistosoma mansoni]
gi|238659403|emb|CAZ30437.1| 40S ribosomal protein S3, putative [Schistosoma mansoni]
Length = 230
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 171/214 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKF+ GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFIKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF F + ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFADGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN YID AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNNYIDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIML+ D GK+GP PLPD VTI KEEV
Sbjct: 186 IKVKIMLDHDSSGKKGPRKPLPDTVTILAAKEEV 219
>gi|226482864|emb|CAX79399.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 171/214 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAE LRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAEPLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIM++ D GK+GP PLPD VTI KEEV
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEV 219
>gi|320580879|gb|EFW95101.1| 40S ribosomal protein S3 [Ogataea parapolymorpha DL-1]
Length = 235
Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 147/232 (63%), Positives = 177/232 (76%), Gaps = 3/232 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M SKKRK VADGVF+AELNE TREL E+GY+GVEVR+TP +TE+II AT TQ VLG
Sbjct: 1 MVANFSKKRKLVADGVFYAELNEFFTRELPEEGYAGVEVRITPTKTEVIISATNTQRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRI ELTS++QKRFKF ++ L+AE+V +RGL A+ Q ESL+YKLL GLAVRRA Y
Sbjct: 61 EKGRRINELTSLIQKRFKFAPGTIVLFAERVQDRGLSAVTQCESLKYKLLNGLAVRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R +MESGAKG EV++SGK + RAKSMKF DG+MI SGQPVN++ID A RHVLLRQG
Sbjct: 121 GVIRHVMESGAKGVEVVISGKSKGARAKSMKFGDGFMIHSGQPVNDFIDVATRHVLLRQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELPVA 232
VLGIKVKIM + ++GP LPD V ++ KE+ VA + PVA
Sbjct: 181 VLGIKVKIMKD-PATNRRGPKA-LPDSVVVYDPKEDQQVAEPYVNDFK-PVA 229
>gi|379994413|gb|AFD22833.1| 40S ribosomal protein S3 [Collodictyon triciliatum]
Length = 173
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 137/173 (79%), Positives = 156/173 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ +ISKK+KFVADGVFFAELNE TR+L EDGY+GVEVRVTP RTE+IIRATRTQNVLG
Sbjct: 1 MSLEISKKKKFVADGVFFAELNEFFTRQLGEDGYAGVEVRVTPARTEVIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRIRELTS+VQKRF+F E ++EL+AE V++RGLCA+AQAESLRYKLLGGLAVRRACY
Sbjct: 61 DKGRRIRELTSLVQKRFRFKEGTIELFAENVSSRGLCAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVR 173
GV+RF ME+GAKG EV VSGKLRAQRAK MKF+DGYMI SG P Y+DSAVR
Sbjct: 121 GVMRFAMEAGAKGVEVAVSGKLRAQRAKVMKFRDGYMIKSGNPTKVYVDSAVR 173
>gi|226476712|emb|CAX72248.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 289 bits (740), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 171/214 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF G MI SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCYGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IKVKIM++ D GK+GP PLPD VTI KEEV
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEV 219
>gi|188572377|gb|ACD65095.1| putative 40S ribosomal protein RPS3 [Novocrania anomala]
Length = 170
Score = 289 bits (739), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 141/170 (82%), Positives = 152/170 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT+ISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRT NVLG
Sbjct: 1 MATRISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTHNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVR+ACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPEGTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRQACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDS 170
GVLRFIMESGA GCEV+VSGKLR QRAK++KF DG MI G+P N+Y ++
Sbjct: 121 GVLRFIMESGANGCEVVVSGKLRGQRAKALKFVDGLMIHRGEPTNDYAET 170
>gi|160331719|ref|XP_001712566.1| rps3 [Hemiselmis andersenii]
gi|159766015|gb|ABW98241.1| rps3 [Hemiselmis andersenii]
Length = 246
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 172/210 (81%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ++SK++KF+ DGVFF+ELNE+L+REL+++GY+ VE+R P++TEII++ T+T ++LG
Sbjct: 30 MNKKLSKQKKFINDGVFFSELNELLSRELSDEGYTNVEIRKAPLKTEIILKMTQTHSILG 89
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+GRRI+E+ +++KRF+F E S+E+Y EK+ N+ LCAI+QAESLRYKLL G+ +RRACY
Sbjct: 90 SRGRRIKEINGLIKKRFQFDEKSLEIYVEKIINKNLCAISQAESLRYKLLRGMVIRRACY 149
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
L+ MESGAKGC + VSGKLRAQRAK+MKF DGY+I SG+PV +YI+ A RH LRQG
Sbjct: 150 STLKSTMESGAKGCIISVSGKLRAQRAKTMKFIDGYIIHSGKPVEDYIEKATRHCFLRQG 209
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
V+GIK+ IML WD G +GP PLPD+VT+
Sbjct: 210 VIGIKISIMLPWDPAGVRGPKKPLPDVVTV 239
>gi|224121646|ref|XP_002318635.1| predicted protein [Populus trichocarpa]
gi|222859308|gb|EEE96855.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 158/233 (67%), Positives = 164/233 (70%), Gaps = 56/233 (24%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR Y
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR--Y 118
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
V F +G
Sbjct: 119 HVFEF-----------------------------------------------------RG 125
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLK-EEVYVAPATATSIELPVA 232
VLGIKVKIML+WD KGK GP TPLPDLVTIHP K EE YV P T+IE+PVA
Sbjct: 126 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEEEEYVPPVMTTNIEIPVA 178
>gi|290349642|dbj|BAI77929.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|290349644|dbj|BAI77930.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 165
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 140/164 (85%), Positives = 146/164 (89%)
Query: 34 YSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNN 93
YSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF F +VELYAEKV
Sbjct: 1 YSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPGTVELYAEKVAT 60
Query: 94 RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFK 153
RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF
Sbjct: 61 RGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFV 120
Query: 154 DGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGK 197
DG MI SG P NEY+D+A RHVLLRQGVLGIKVKIML WD GK
Sbjct: 121 DGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGK 164
>gi|294897613|ref|XP_002776024.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239882489|gb|EER07840.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/179 (76%), Positives = 159/179 (88%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRRA YGVL
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVL 128
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
RF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V +RQ L
Sbjct: 129 RFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQVFL 187
>gi|294886505|ref|XP_002771736.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239875488|gb|EER03552.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 184
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/176 (77%), Positives = 158/176 (89%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRRA YGVL
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVL 128
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
RF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V +RQ
Sbjct: 129 RFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQ 184
>gi|198456485|ref|XP_002136327.1| GA25150, partial [Drosophila pseudoobscura pseudoobscura]
gi|198142674|gb|EDY71398.1| GA25150, partial [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 139/191 (72%), Positives = 155/191 (81%), Gaps = 1/191 (0%)
Query: 41 VTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA 100
VTP RTEIII AT+TQ VLGEKGRRIRELT++VQKRF F +ELYAEKV RGLCAIA
Sbjct: 1 VTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIA 60
Query: 101 QAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISS 160
QAESLRYKL GGLAVRRACYGVLRFI+ESGAKGCEV+VSGKLR QRAKSMKF DG MI S
Sbjct: 61 QAESLRYKLTGGLAVRRACYGVLRFIIESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS 120
Query: 161 GQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYV 219
G P N+Y+++A RHVLLRQGVLGIKVKIML +D K K GP PLPD V+ + P +E++Y
Sbjct: 121 GDPCNDYVETATRHVLLRQGVLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYE 180
Query: 220 APATATSIELP 230
P T I P
Sbjct: 181 TPETEYKIPPP 191
>gi|426369809|ref|XP_004051876.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Gorilla gorilla
gorilla]
Length = 206
Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 140/173 (80%), Positives = 147/173 (84%), Gaps = 2/173 (1%)
Query: 54 RTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL 113
RTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGL
Sbjct: 17 RTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGL 76
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVR 173
AVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVR
Sbjct: 77 AVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 136
Query: 174 HVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
HVLLRQGVLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 137 HVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 187
>gi|66800843|ref|XP_629347.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4]
gi|74834663|sp|P90526.1|RS3_DICDI RecName: Full=40S ribosomal protein S3
gi|1688320|gb|AAB36959.1| RpgG [Dictyostelium discoideum]
gi|60462650|gb|EAL60852.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4]
Length = 218
Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 167/212 (78%), Gaps = 3/212 (1%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ QISKKRKFVADGVF AELNE+ TRE +D GYSGVE++ +P TEIIIRA++TQ V+G
Sbjct: 4 SLQISKKRKFVADGVFHAELNELFTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVG 63
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
RRI+EL S+VQKRF F E +V L+AEK+ NRGLCA+AQAESL+ KLL GL VR+ACY
Sbjct: 64 PNARRIQELCSLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACY 123
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
++ IM GAKGCEVIVSGKLRAQRAKSMKF+DGYMI SGQP ++ID A RHVLLRQG
Sbjct: 124 AIVHQIMTRGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFIDFACRHVLLRQG 183
Query: 181 VLGIKVKIMLEWDQKGK-QGPTT-PLPDLVTI 210
LG+KV IML +D+ K G P PD+V I
Sbjct: 184 TLGVKVAIMLPYDETRKIHGACNIPQPDVVVI 215
>gi|385302955|gb|EIF47058.1| 40s ribosomal protein s3 [Dekkera bruxellensis AWRI1499]
Length = 261
Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 136/215 (63%), Positives = 170/215 (79%), Gaps = 2/215 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+A+ ISK RK VADGVF+AELNE TREL E+GY+GVEVR+TP +T++IIRA++T VLG
Sbjct: 2 VASHISKTRKLVADGVFYAELNEFFTRELPEEGYAGVEVRITPTKTDVIIRASQTAMVLG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT ++QKRF F S+ LYAE+V ++GL A Q ESLR+KLL GLAVRRA Y
Sbjct: 62 EKGRRIRELTMLLQKRFHFAPGSIVLYAERVRDKGLSAATQCESLRFKLLNGLAVRRAAY 121
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+RF ME+GAKG EVI++GK + RAK+MKF DG+MI +GQP ++ID A RHVL+RQG
Sbjct: 122 GVIRFAMEAGAKGVEVIIAGKAKGARAKAMKFADGFMIHTGQPAKDFIDVACRHVLMRQG 181
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE 215
VLG+KVKIML+ ++GP LPD V +H KE
Sbjct: 182 VLGLKVKIMLD-PATSQRGPKX-LPDAVIVHEPKE 214
>gi|330840814|ref|XP_003292404.1| 40S ribosomal protein S3 [Dictyostelium purpureum]
gi|325077360|gb|EGC31078.1| 40S ribosomal protein S3 [Dictyostelium purpureum]
Length = 218
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 167/212 (78%), Gaps = 3/212 (1%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ Q+SKKRKFV DGVF AELNE+ TRE +D GYSGVE++ +P TEIIIRA++TQ V+G
Sbjct: 4 SLQMSKKRKFVLDGVFHAELNELFTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVG 63
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
RRI+EL S+VQKRF F E +V L+AEK+ NRGLCA+AQAESL+ KLL GL VR+ACY
Sbjct: 64 PNARRIQELCSLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACY 123
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
++ IM GAKGCEVIVSGKLRAQRAKSMKF+DGYMI SGQP +++D A RHVLLRQG
Sbjct: 124 AIVHQIMTRGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFVDFACRHVLLRQG 183
Query: 181 VLGIKVKIMLEWDQKGK-QGPT-TPLPDLVTI 210
LG+KV IML +D+ GK G P PD+V I
Sbjct: 184 TLGVKVAIMLPYDESGKIHGACKIPQPDIVLI 215
>gi|38047525|gb|AAR09665.1| similar to Drosophila melanogaster RpS3, partial [Drosophila
yakuba]
Length = 172
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 134/166 (80%), Positives = 146/166 (87%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVR TP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRATPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDS 170
+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVET 172
>gi|164598968|gb|ABX72228.2| ribosomal protein S3 [Ostrinia furnacalis]
Length = 166
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 132/163 (80%), Positives = 143/163 (87%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
III ATRTQ+VLGEKGRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRY
Sbjct: 1 IIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRY 60
Query: 108 KLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEY 167
KL+GGLAVRRACYGVLRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y
Sbjct: 61 KLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDY 120
Query: 168 IDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
+++A RHVLLRQGVLGIKVKIML WDQ+GK GP P PD + +
Sbjct: 121 VNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILV 163
>gi|260946855|ref|XP_002617725.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849579|gb|EEQ39043.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 242
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 137/223 (61%), Positives = 168/223 (75%), Gaps = 2/223 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR T +TE+I++A+ TQ VLGE+GR
Sbjct: 9 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTNTKTEVIVKASNTQGVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK P++ + +YAE+V R L A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 69 RIHELTSLIVKRFKLPQDGIVIYAERVEERALSAAVQAEALKAKLLSGLPIRRAAYGVLR 128
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP E+ID+A+RHVL+RQGVLGI
Sbjct: 129 FTMAAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTREFIDTAIRHVLMRQGVLGI 188
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSI 227
+VKIM + K K GP LPD V I KEE PA +
Sbjct: 189 RVKIMRD-PAKNKFGPKA-LPDAVMIAEYKEEDESVPAPTVKV 229
>gi|290562954|gb|ADD38871.1| 40S ribosomal protein S3-B [Lepeophtheirus salmonis]
Length = 229
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/217 (62%), Positives = 169/217 (77%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT+ + RKF+ G+F AEL+E+L RELAEDGYSG+ VR T +TE+II AT+TQNVLG
Sbjct: 1 MATKETTTRKFIKAGLFKAELDEMLKRELAEDGYSGIMVRGTHPKTEVIISATKTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
++ +RIRELTS+++KRF F + ++ LYA+KV RG+ A+AQAESL+Y+L GG+ VR+ACY
Sbjct: 61 DESKRIRELTSLIEKRFAFEQGTLSLYADKVAVRGISAVAQAESLKYRLTGGMPVRKACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
VL+ IMES AKG EVIVSGK++ QRAK+MKF DG MI SG PVN YI AVRHVLL QG
Sbjct: 121 AVLKQIMESEAKGGEVIVSGKIKGQRAKAMKFTDGLMIHSGDPVNYYIAKAVRHVLLPQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
+LGIKVKIML+ D GK G LPD + I KEEV
Sbjct: 181 ILGIKVKIMLDHDPAGKTGCKKTLPDHLYISEPKEEV 217
>gi|355567874|gb|EHH24215.1| hypothetical protein EGK_07837 [Macaca mulatta]
Length = 207
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 154/217 (70%), Gaps = 36/217 (16%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV DG+F AELNE LT ELAE+ YSGVE
Sbjct: 1 MAVQISKKRKFVTDGMFKAELNEFLTWELAEECYSGVE---------------------- 38
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 39 --------------KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 84
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVL+FIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVL RQG
Sbjct: 85 GVLQFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLFRQG 144
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
VLGIKVKIML W+ GK GP PLPD ++I K+E+
Sbjct: 145 VLGIKVKIMLPWNPTGKIGPKKPLPDHMSIVGPKDEI 181
>gi|237862670|gb|ACR24960.1| ribosomal protein S3 [Lepidochitona cinerea]
Length = 156
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/156 (86%), Positives = 141/156 (90%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
ATQ+SKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVT RTEIII AT+TQNVLGE
Sbjct: 1 ATQVSKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTQTRTEIIILATKTQNVLGE 60
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACYG
Sbjct: 61 KGRRIRELTAVVQKRFNFPEGSVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYG 120
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM 157
VL+FIMES AKGCEV+VSGKLR QRAKSM F DG M
Sbjct: 121 VLKFIMESQAKGCEVVVSGKLRGQRAKSMTFVDGLM 156
>gi|149238902|ref|XP_001525327.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450820|gb|EDK45076.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239]
Length = 247
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 166/218 (76%), Gaps = 2/218 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP N++ID A+RHVL+RQGVLG+
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQGVLGV 185
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPA 222
KVKIM + Q + GP LPD V I K+E V PA
Sbjct: 186 KVKIMKDPAQN-RFGPRA-LPDAVKIAEAKDEDEVVPA 221
>gi|300121261|emb|CBK21641.2| unnamed protein product [Blastocystis hominis]
gi|300176039|emb|CBK23350.2| unnamed protein product [Blastocystis hominis]
Length = 239
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 169/217 (77%), Gaps = 1/217 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
M++Q ISKK + VADGVF+AEL+E+L REL+E GYSGV +R + ++TEIIIRA R Q ++
Sbjct: 1 MSSQRISKKHQCVADGVFYAELDELLNRELSEVGYSGVSIRKSTMKTEIIIRAPRPQEII 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GE RRI ELT++VQKRF F EN+V LYAE+V R LCA QAE+L+Y+LL GL VRRA
Sbjct: 61 GENSRRINELTALVQKRFGFNENNVVLYAERVAERSLCAQTQAEALKYRLLAGLPVRRAA 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
Y V+R +E+GAKGCEVIVSGKLR QRA +MKFK+GYMI +G E++D A RHVL++Q
Sbjct: 121 YAVIRSALEAGAKGCEVIVSGKLRQQRANAMKFKEGYMIKTGNACKEFVDEATRHVLVKQ 180
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
G+LG+KV+IM D +G+ GP LPD++ +H KE+
Sbjct: 181 GMLGVKVRIMKPTDPEGRLGPKKALPDIIVVHEPKEQ 217
>gi|167394938|ref|XP_001741154.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760]
gi|165894380|gb|EDR22402.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760]
Length = 250
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 131/216 (60%), Positives = 164/216 (75%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL+ DGYSGVEVR + +IIIRATRT N++G
Sbjct: 21 LKTNISRKHKFVADGVFYAELNELLQRELSADGYSGVEVRKNGSKFQIIIRATRTTNIIG 80
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRI ELT+++ RF FP++ +ELY EKV RGLC ++QAES++YK+ GL VRRA
Sbjct: 81 DKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLPVRRAVG 140
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
V+R IMESGAKGCEV +SGKLR QRA+ M FK+GYMI SG ++ SAVR VLLR G
Sbjct: 141 SVMRLIMESGAKGCEVSISGKLRGQRAQGMVFKEGYMIKSGNATRQFYSSAVRCVLLRMG 200
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
++GIKV IML+ D GK GP +PD+V I K+E
Sbjct: 201 IIGIKVTIMLDTDPSGKNGPAARIPDVVEIKTPKDE 236
>gi|28189869|dbj|BAC56549.1| similar to ribosomal protein S3 [Bos taurus]
Length = 147
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/147 (91%), Positives = 138/147 (93%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGR
Sbjct: 1 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLR
Sbjct: 61 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 120
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMK 151
FIMESGAKGCEV+VSGKLR QRAKSMK
Sbjct: 121 FIMESGAKGCEVVVSGKLRGQRAKSMK 147
>gi|167389197|ref|XP_001738857.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760]
gi|165897685|gb|EDR24767.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760]
Length = 244
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 131/216 (60%), Positives = 164/216 (75%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL+ DGYSGVEVR + +IIIRATRT N++G
Sbjct: 15 LKTNISRKHKFVADGVFYAELNELLQRELSADGYSGVEVRKNGSKFQIIIRATRTTNIIG 74
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRI ELT+++ RF FP++ +ELY EKV RGLC ++QAES++YK+ GL VRRA
Sbjct: 75 DKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLPVRRAVG 134
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
V+R IMESGAKGCEV +SGKLR QRA+ M FK+GYMI SG ++ SAVR VLLR G
Sbjct: 135 SVMRLIMESGAKGCEVSISGKLRGQRAQGMVFKEGYMIKSGNATRQFYSSAVRCVLLRMG 194
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
++GIKV IML+ D GK GP +PD+V I K+E
Sbjct: 195 IIGIKVTIMLDTDPSGKNGPAARIPDVVEIKTPKDE 230
>gi|146420499|ref|XP_001486205.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC
6260]
gi|146389620|gb|EDK37778.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC
6260]
Length = 238
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 165/218 (75%), Gaps = 2/218 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE++ RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIVIYAERIEERGLSAAVQAEALKSKLLNGLPMRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP N++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMAAGAKGVEVVISGKLRAARAKSQKYSDGFMIHSGQPTNDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPA 222
+VKIM + + GP LPD V I K+E V PA
Sbjct: 186 RVKIMKD-PATARVGPKA-LPDAVLISEAKDEDEVVPA 221
>gi|354546036|emb|CCE42765.1| hypothetical protein CPAR2_204080 [Candida parapsilosis]
Length = 247
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 135/220 (61%), Positives = 167/220 (75%), Gaps = 2/220 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T +SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+
Sbjct: 5 TILSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQ 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGV
Sbjct: 65 GRRIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKTKLLNGLPIRRAAYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRF M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP N++ID A+RHVL+RQGVL
Sbjct: 125 LRFAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQGVL 184
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPA 222
G+KVKIM + + + GP LPD V I K+E V PA
Sbjct: 185 GVKVKIMKD-PEANRFGPRA-LPDAVKIAEAKDEDEVIPA 222
>gi|344303916|gb|EGW34165.1| hypothetical protein SPAPADRAFT_49231 [Spathaspora passalidarum
NRRL Y-27907]
Length = 246
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 135/223 (60%), Positives = 165/223 (73%), Gaps = 2/223 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQAVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK V +YAE++ R L A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLITKRFKLSPEGVAIYAERIEERALSAAVQAEALKAKLLSGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP N++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSI 227
KVKIM + K GP LPD V I K+E + PA +
Sbjct: 186 KVKIMKD-PATNKFGPRA-LPDAVKIAEAKDEDEIIPAPTVKV 226
>gi|67467661|ref|XP_649921.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS]
gi|67484576|ref|XP_657508.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS]
gi|56466448|gb|EAL44535.1| 40S ribosomal protein S3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56474761|gb|EAL52118.1| 40S ribosomal protein S3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449702147|gb|EMD42841.1| 40S ribosomal protein S3 [Entamoeba histolytica KU27]
gi|449710680|gb|EMD49710.1| 40S ribosomal protein S3 [Entamoeba histolytica KU27]
Length = 244
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 164/216 (75%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL+ DGYSGVEVR + +IIIRATRT N++G
Sbjct: 15 LKTNISRKHKFVADGVFYAELNELLQRELSADGYSGVEVRKNGSKFQIIIRATRTTNIIG 74
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRI ELT+++ RF FP++ +ELY EKV RGLC ++QAES++YK+ GL VRRA
Sbjct: 75 DKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLPVRRAVG 134
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
V+R IM+SGAKGCEV +SGKLR QRA+ M FK+GYMI SG ++ SAVR VLLR G
Sbjct: 135 SVMRLIMDSGAKGCEVSISGKLRGQRAQGMVFKEGYMIKSGNATRQFYSSAVRCVLLRMG 194
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
++GIKV IML+ D GK GP +PD+V I K+E
Sbjct: 195 IIGIKVTIMLDTDPSGKNGPAARIPDVVEIKTPKDE 230
>gi|448526764|ref|XP_003869393.1| Rps3 ribosomal protein S3 [Candida orthopsilosis Co 90-125]
gi|380353746|emb|CCG23258.1| Rps3 ribosomal protein S3 [Candida orthopsilosis]
Length = 247
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/220 (61%), Positives = 166/220 (75%), Gaps = 2/220 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T +SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+
Sbjct: 5 TILSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQ 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGV
Sbjct: 65 GRRIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LRF M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP N++ID A+RHVL+RQGVL
Sbjct: 125 LRFAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQGVL 184
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPA 222
G+KVKIM + + GP LPD V I K+E V PA
Sbjct: 185 GVKVKIMKD-PAANRFGPRA-LPDAVKIAEAKDEDEVIPA 222
>gi|448103770|ref|XP_004200121.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
gi|359381543|emb|CCE82002.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 165/218 (75%), Gaps = 2/218 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGERGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + V +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLICKRFKISQEGVVIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPARDFIDLAIRHVLMRQGVLGI 185
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPA 222
KVKIM + + GP LPD V I K+E + PA
Sbjct: 186 KVKIMKD-PAASRVGPKA-LPDNVVISEAKDEDEIIPA 221
>gi|115389474|ref|XP_001212242.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624]
gi|114194638|gb|EAU36338.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624]
Length = 263
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 133/168 (79%), Positives = 142/168 (84%)
Query: 49 IIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYK 108
+IRAT TQ VLGE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYK
Sbjct: 49 VIRATHTQEVLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYK 108
Query: 109 LLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 168
LL GLAVRRACYGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP E+I
Sbjct: 109 LLNGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFI 168
Query: 169 DSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
DSA RHVLLRQGVLGIKVKIM D +GK GP LPD VTI KEE
Sbjct: 169 DSATRHVLLRQGVLGIKVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEE 216
>gi|300176595|emb|CBK24260.2| unnamed protein product [Blastocystis hominis]
Length = 239
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 166/213 (77%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
++SKKR+ VADGVF+AEL+E+L RELAE GYSGV +R + ++TEIIIRA R Q ++GE
Sbjct: 5 RVSKKRQCVADGVFYAELDELLNRELAEVGYSGVSIRKSTMKTEIIIRAPRPQEIIGENS 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRI ELT++VQKRF F EN+V LYAE+V R LCA QAE+L+Y+LL GL VRRA V+
Sbjct: 65 RRINELTALVQKRFGFNENNVVLYAERVAERSLCAQTQAEALKYRLLAGLPVRRAATAVI 124
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
R +E+GAKGCEVIVSGKLR QRA +MKFK+GYMI +G E++D A RHVL++QG+LG
Sbjct: 125 RSALEAGAKGCEVIVSGKLRQQRANAMKFKEGYMIKTGYACKEFVDEATRHVLVKQGMLG 184
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
+KV+IM D +G+ GP LPD++ +H KE+
Sbjct: 185 VKVRIMKPTDPEGRLGPKKALPDIIVVHEPKEQ 217
>gi|50427849|ref|XP_462537.1| 40S ribosomal protein S3 [Debaryomyces hansenii CBS767]
gi|49658207|emb|CAG91047.1| DEHA2G22770p [Debaryomyces hansenii CBS767]
Length = 239
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 166/218 (76%), Gaps = 2/218 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPTKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLICKRFKISQEGIVIYAERVEERGLSAAVQAEALKSKLLNGLPLRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTKDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPA 222
KVKIM + K GP + LPD V I K++ + PA
Sbjct: 186 KVKIMKD-PATNKFGPKS-LPDAVKISEAKDDDEIIPA 221
>gi|126132980|ref|XP_001383015.1| 40S ribosomal protein S3 [Scheffersomyces stipitis CBS 6054]
gi|126094840|gb|ABN64986.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/218 (61%), Positives = 164/218 (75%), Gaps = 2/218 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPTKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLLVKRFKLSPEGIVIYAERVEERGLSAAVQAEGLKAKLLSGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYSDGFMIHSGQPTKDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPA 222
KVKIM + + GP + LPD V I K+E V PA
Sbjct: 186 KVKIMKD-PAANRFGPKS-LPDAVKISEAKDEDEVIPA 221
>gi|149068845|gb|EDM18397.1| rCG40478, isoform CRA_g [Rattus norvegicus]
Length = 177
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 134/148 (90%), Positives = 137/148 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAK 148
GVLRFIMESGAKGCEV+VSGKLR QRA
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAN 148
>gi|6540574|gb|AAF16402.1| ribosomal protein RPS3 [Musca domestica]
Length = 165
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 131/162 (80%), Positives = 141/162 (87%)
Query: 36 GVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRG 95
GVEVRVTP RTEIII AT+TQ VLGEKGRRIRELT++VQKRF F +ELYAEKV RG
Sbjct: 3 GVEVRVTPARTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFSFEPGRIELYAEKVATRG 62
Query: 96 LCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDG 155
LCAIAQAESLRYKL GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG
Sbjct: 63 LCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDG 122
Query: 156 YMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGK 197
MI SG P N+Y+++A RHVLLRQGVLGIKVKIML +D K K
Sbjct: 123 LMIHSGDPCNDYVETATRHVLLRQGVLGIKVKIMLPYDPKNK 164
>gi|448100073|ref|XP_004199265.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
gi|359380687|emb|CCE82928.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 165/218 (75%), Gaps = 2/218 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGERGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+I ELTS++ KRFK + + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 KIHELTSLICKRFKISQEGIVIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPAKDFIDLAIRHVLMRQGVLGI 185
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPA 222
KVKIM + + GP LPD V I K+E + PA
Sbjct: 186 KVKIMKD-PAASRIGPKA-LPDNVVISEAKDEDEIIPA 221
>gi|241958636|ref|XP_002422037.1| 40S ribosomal protein S3 [Candida dubliniensis CD36]
gi|223645382|emb|CAX40038.1| ribosomal protein, small subunit, putative [Candida dubliniensis
CD36]
Length = 254
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 164/218 (75%), Gaps = 2/218 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPA 222
KVKIM + + GP LPD V I K+E V PA
Sbjct: 186 KVKIMKD-PAANRFGPKA-LPDAVKIAEAKDEDEVIPA 221
>gi|28189875|dbj|BAC56552.1| similar to S3 ribosomal protein [Bos taurus]
Length = 145
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 133/145 (91%), Positives = 136/145 (93%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
KKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRI
Sbjct: 1 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 60
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
RELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI
Sbjct: 61 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 120
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMK 151
MESGAKGCEV+VSGKLR QRAKSMK
Sbjct: 121 MESGAKGCEVVVSGKLRGQRAKSMK 145
>gi|68490130|ref|XP_711114.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|68490165|ref|XP_711097.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|46432373|gb|EAK91858.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|46432391|gb|EAK91875.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|238879938|gb|EEQ43576.1| 40S ribosomal protein S3 [Candida albicans WO-1]
Length = 251
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 134/218 (61%), Positives = 164/218 (75%), Gaps = 2/218 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPA 222
KVKIM + + GP LPD V I K+E V PA
Sbjct: 186 KVKIMKD-PAANRFGPRA-LPDAVKIAEAKDEDEVIPA 221
>gi|255721609|ref|XP_002545739.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404]
gi|240136228|gb|EER35781.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404]
Length = 248
Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 135/218 (61%), Positives = 163/218 (74%), Gaps = 2/218 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEGLKAKLLNGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+MI SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPA 222
KVKIM + + GP LPD V I K+E V PA
Sbjct: 186 KVKIMKD-PAANRFGPKA-LPDAVKIAEAKDEDEVIPA 221
>gi|148684444|gb|EDL16391.1| ribosomal protein S3, isoform CRA_f [Mus musculus]
Length = 168
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/145 (91%), Positives = 135/145 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQ 145
GVLRFIMESGAKGCEV+VSGKLR Q
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQ 145
>gi|330040462|ref|XP_003239924.1| 40S ribosomal protein S3 [Cryptomonas paramecium]
gi|327206850|gb|AEA39026.1| 40S ribosomal protein S3 [Cryptomonas paramecium]
Length = 210
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 163/206 (79%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S K+K VADGVFF+E+NE+L+REL E+GYSG+E++ + ++TE+I++ RT+ ++ G+
Sbjct: 2 LSGKKKIVADGVFFSEVNELLSRELREEGYSGMELKKSSIKTELILKTVRTKQMIISGGK 61
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRE+T +V+KRF ++++ +Y EKV NRGL + QAE LRYKLL G+ R+ACY VLR
Sbjct: 62 RIREITLLVKKRFGLEDSNLNIYVEKVINRGLVSSIQAEFLRYKLLKGITTRKACYSVLR 121
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGAKGC + +SGKLRAQRAKSMKF +GY+I SGQ V YI S+ RH +L+QGV+GI
Sbjct: 122 SIMESGAKGCLITISGKLRAQRAKSMKFTEGYIIHSGQAVKNYISSSTRHCILKQGVIGI 181
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI 210
K+ IML WD GK+GP PLPD+VTI
Sbjct: 182 KISIMLPWDPYGKKGPVNPLPDMVTI 207
>gi|390988241|gb|AFM36762.1| ribosomal protein S3, partial [Agrotis ipsilon]
Length = 192
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/169 (75%), Positives = 142/169 (84%), Gaps = 1/169 (0%)
Query: 56 QNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV 115
Q+VLGEKGRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAV
Sbjct: 6 QSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAV 65
Query: 116 RRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV 175
RRACYGVLRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHV
Sbjct: 66 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 125
Query: 176 LLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
LLRQGVLGIKVKIML WD++GK GP P PD + + P E V + P +
Sbjct: 126 LLRQGVLGIKVKIMLPWDKQGKNGPKKPQPDHILVTEPKDEPVPLEPTS 174
>gi|402586120|gb|EJW80058.1| 30S ribosomal protein S3 [Wuchereria bancrofti]
Length = 202
Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 130/164 (79%), Positives = 140/164 (85%)
Query: 47 EIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR 106
+III ATRTQ+VLGE+GRRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLR
Sbjct: 2 QIIILATRTQSVLGERGRRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLR 61
Query: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNE 166
YKL+GGLAVRRACYGVLRFIMES A+GCEVIVSGKLR QRAKSMKF DG MI SGQPVN+
Sbjct: 62 YKLVGGLAVRRACYGVLRFIMESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVND 121
Query: 167 YIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
YI AVRHV LRQGVLGIKVKIML D KG GP LPD + I
Sbjct: 122 YIQQAVRHVQLRQGVLGIKVKIMLPHDPKGNMGPRIALPDQIHI 165
>gi|238683661|gb|ACR54109.1| ribosomal protein S3 [Palaemonetes varians]
Length = 189
Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 130/175 (74%), Positives = 143/175 (81%), Gaps = 1/175 (0%)
Query: 55 TQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLA 114
TQNVLGEKGRRIRELTS+VQ+RF F + +VELYAEKV RGLCAIAQAESLRYKL+GGLA
Sbjct: 1 TQNVLGEKGRRIRELTSLVQRRFGFADGTVELYAEKVAQRGLCAIAQAESLRYKLVGGLA 60
Query: 115 VRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRH 174
VRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMK DG MI SG+P Y+D+AVRH
Sbjct: 61 VRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKSTDGLMIHSGEPRRHYVDTAVRH 120
Query: 175 VLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVY-VAPATATSIE 228
V LRQGVLGIKVKIML WD GK GP TPLPD + I K+EV P + +E
Sbjct: 121 VHLRQGVLGIKVKIMLPWDPTGKNGPRTPLPDHINIVEPKDEVLPTEPHSENKME 175
>gi|440301734|gb|ELP94120.1| 40S ribosomal protein S3-1, putative [Entamoeba invadens IP1]
Length = 246
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 163/217 (75%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL DGYSGVE+R + +IIIRATR N++G
Sbjct: 15 LKTNISRKHKFVADGVFYAELNELLQRELCADGYSGVEIRKNANKFQIIIRATRASNIIG 74
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRIRELTS++ RF F +N +EL+ EKV +RGLC ++QAES++YK+ G+ VRRA
Sbjct: 75 DKGRRIRELTSLMISRFGFKKNCLELFVEKVASRGLCPVSQAESIKYKIAEGVPVRRAVG 134
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
V++ IMESGA GCEV++SGKLR QRA+ M FK+GY+I SG ++ SA+R VLLR G
Sbjct: 135 SVMKLIMESGALGCEVVISGKLRGQRAQHMIFKEGYLIKSGNATRQFYASAIRCVLLRMG 194
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
++GIKV IML D GK GP +PD++ I K+EV
Sbjct: 195 IIGIKVNIMLNTDPTGKTGPAARIPDVIEIKTPKDEV 231
>gi|398021515|ref|XP_003863920.1| 40S ribosomal protein S3, putative [Leishmania donovani]
gi|322502154|emb|CBZ37237.1| 40S ribosomal protein S3, putative [Leishmania donovani]
Length = 342
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 157/206 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELAE+G+SGV VT +RTEI+I+AT+T+ VLG GR
Sbjct: 127 LSKKRMIIRDGVFYAELFEFLKRELAEEGFSGVSYHVTTLRTEIVIKATKTREVLGVNGR 186
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRRA G++R
Sbjct: 187 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 246
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++DSA RH +R G +G+
Sbjct: 247 YVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGV 306
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI 210
KVKIML D G+ GP+ PLPD++T+
Sbjct: 307 KVKIMLPGDSTGRNGPSEPLPDVITV 332
>gi|154343872|ref|XP_001567880.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065214|emb|CAM40641.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 219
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 157/206 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELAE+G+SGV +T +RTEI+I+AT+T+ VLG GR
Sbjct: 4 LSKKRMIVRDGVFYAELFEFLKRELAEEGFSGVSYHITTLRTEIVIKATKTREVLGVNGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++DSA RH +R G +G+
Sbjct: 124 YVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGV 183
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI 210
KVKIML D G+ GP+ PLPD++T+
Sbjct: 184 KVKIMLPSDSTGRNGPSEPLPDVITV 209
>gi|154334600|ref|XP_001563547.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060568|emb|CAM42116.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 219
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 157/206 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELAE+G+SGV +T +RTEI+I+AT+T+ VLG GR
Sbjct: 4 LSKKRMIVRDGVFYAELFEFLKRELAEEGFSGVSYHITTLRTEIVIKATKTREVLGVNGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++DSA RH +R G +G+
Sbjct: 124 YVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGV 183
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI 210
KVKIML D G+ GP+ PLPD++T+
Sbjct: 184 KVKIMLPGDSTGRNGPSEPLPDVITV 209
>gi|146082044|ref|XP_001464434.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|146097654|ref|XP_001468174.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|157866908|ref|XP_001682009.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|157874873|ref|XP_001685848.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|401418259|ref|XP_003873621.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|401427716|ref|XP_003878341.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|68125460|emb|CAJ03321.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|68128921|emb|CAJ06157.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|134068526|emb|CAM66821.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|134072541|emb|CAM71255.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|322489852|emb|CBZ25113.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494589|emb|CBZ29891.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 219
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 157/206 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELAE+G+SGV VT +RTEI+I+AT+T+ VLG GR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELAEEGFSGVSYHVTTLRTEIVIKATKTREVLGVNGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++DSA RH +R G +G+
Sbjct: 124 YVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGV 183
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI 210
KVKIML D G+ GP+ PLPD++T+
Sbjct: 184 KVKIMLPGDSTGRNGPSEPLPDVITV 209
>gi|281206799|gb|EFA80983.1| 40S ribosomal protein S3 [Polysphondylium pallidum PN500]
Length = 221
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 160/210 (76%), Gaps = 3/210 (1%)
Query: 4 QISKKRK--FVADGVFFAELNEVLTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+I KK + FVADGVF AELNE+ TRE +D GYSGVE++ P TEIIIRA++TQ ++G
Sbjct: 7 KIEKKWRVVFVADGVFHAELNELFTREFNKDEGYSGVELKTGPASTEIIIRASKTQAIVG 66
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+ RRI EL S+VQKRF F E +V LYAEKV NRGLCAIAQA+SL+ KLL GL VRRACY
Sbjct: 67 QNARRIHELCSLVQKRFGFAEGTVTLYAEKVQNRGLCAIAQADSLKGKLLLGLPVRRACY 126
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
++ IM GAKGCEVIVSGKLRAQRAK+MKF DGYMI SGQP +D A HVLLRQG
Sbjct: 127 AIVHQIMTKGAKGCEVIVSGKLRAQRAKAMKFTDGYMIKSGQPSQNMVDFACCHVLLRQG 186
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
LG+KV IML +D GK G TP PD+V I
Sbjct: 187 TLGVKVAIMLPYDPTGKNGVQTPQPDIVVI 216
>gi|116488040|gb|ABJ98602.1| 40S ribosomal protein S3 [Scophthalmus maximus]
Length = 147
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/143 (90%), Positives = 134/143 (93%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGR
Sbjct: 5 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 125 FIMESGAKGCEVIVSGKLRAQRA 147
FIMESGAKGCEV+VSGKLR QRA
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRA 147
>gi|223942381|gb|ACN25274.1| unknown [Zea mays]
gi|413921203|gb|AFW61135.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 148
Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/136 (93%), Positives = 133/136 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEV 136
GVLRF+MESGAKGCEV
Sbjct: 121 GVLRFVMESGAKGCEV 136
>gi|413917291|gb|AFW57223.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 196
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/138 (92%), Positives = 134/138 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIV 138
GVLR++MESGAKGCEV V
Sbjct: 121 GVLRYVMESGAKGCEVSV 138
>gi|344231772|gb|EGV63654.1| ribosomal protein S3 [Candida tenuis ATCC 10573]
gi|344231773|gb|EGV63655.1| hypothetical protein CANTEDRAFT_114699 [Candida tenuis ATCC 10573]
Length = 237
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 133/227 (58%), Positives = 164/227 (72%), Gaps = 2/227 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ Q VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEHGYAGVEVRRTPTKLEIIVKASNPQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+I ELTS++ KRFK + V +YAE+V RGL A QAE L+ KLL GL RRA YGVLR
Sbjct: 66 KIHELTSLICKRFKLAKEGVVIYAERVEIRGLSAAVQAEGLKAKLLSGLPFRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLR RAK+ K+ DG+MI SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMNNGAKGVEVVISGKLRGARAKAQKYADGFMIHSGQPTKDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELPV 231
+VKIM + K GP LPD V + K++ V PA +PV
Sbjct: 186 RVKIMKD-PATNKFGPKA-LPDAVKVAEAKDDEEVIPAPTVKSYIPV 230
>gi|399949695|gb|AFP65353.1| 40S ribosomal protein S3 [Chroomonas mesostigmatica CCMP1168]
Length = 217
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 114/210 (54%), Positives = 162/210 (77%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M + +S K+KF+ DGVFF+ELNE L +EL+E+GY+ VE+R TP++ EII++ T++ ++
Sbjct: 1 MKSILSIKKKFIIDGVFFSELNEFLCKELSEEGYANVEIRKTPLKIEIILKMTQSYTIMS 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KGRRI E++++++KRF F +N + L+ EK+ NRGL A +QAE LRYKL+ G+ R+ACY
Sbjct: 61 YKGRRIGEISAMIKKRFNFGDNFISLFVEKIINRGLSANSQAELLRYKLVKGIITRKACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
+LR MESGAKGC + VSGK++ QRAK+MKF DGY+I SGQPV +Y++ A RH L+QG
Sbjct: 121 SILRSTMESGAKGCLISVSGKIKGQRAKTMKFIDGYIIHSGQPVEDYVEKATRHCFLKQG 180
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
++G+K+ IML WD G GP PLPD+VT+
Sbjct: 181 MIGVKISIMLPWDPVGTIGPKKPLPDVVTV 210
>gi|379072588|gb|AFC92926.1| ribosomal protein S3B, partial [Pipa carvalhoi]
gi|379072590|gb|AFC92927.1| ribosomal protein S3B, partial [Rhinophrynus dorsalis]
Length = 162
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/161 (80%), Positives = 135/161 (83%), Gaps = 2/161 (1%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRF
Sbjct: 1 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 60
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIK
Sbjct: 61 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 120
Query: 186 VKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VKIML WD GK GP PLPD V+I KEE+ P T S
Sbjct: 121 VKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEIL--PTTPIS 159
>gi|154284746|ref|XP_001543168.1| 40S ribosomal protein S3 [Ajellomyces capsulatus NAm1]
gi|150406809|gb|EDN02350.1| hypothetical protein HCAG_00214 [Ajellomyces capsulatus NAm1]
Length = 239
Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 125/148 (84%), Positives = 134/148 (90%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKF 152
FIMESGAKGCEV+VSGKLRA RAKSMKF
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKF 155
>gi|71408264|ref|XP_806547.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|71653987|ref|XP_815622.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|71656239|ref|XP_816670.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|70870324|gb|EAN84696.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|70880689|gb|EAN93771.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|70881813|gb|EAN94819.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407844360|gb|EKG01918.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407849237|gb|EKG04048.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407867308|gb|EKG08545.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
Length = 214
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 157/211 (74%), Gaps = 3/211 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
+MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++D A RH LR G LG+
Sbjct: 124 HVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGV 183
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE 215
KVKIML K Q LPD++T+ KE
Sbjct: 184 KVKIML---PKSMQNEEEILPDVITVLEPKE 211
>gi|71406574|ref|XP_805815.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|70869366|gb|EAN83964.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407405323|gb|EKF30377.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi marinkellei]
Length = 214
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 157/211 (74%), Gaps = 3/211 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
+MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++D A RH LR G LG+
Sbjct: 124 HVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGV 183
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE 215
KVKIML K Q LPD++T+ KE
Sbjct: 184 KVKIML---PKSMQDEEEILPDVITVLEPKE 211
>gi|407409823|gb|EKF32505.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi marinkellei]
Length = 253
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 157/211 (74%), Gaps = 3/211 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 43 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 102
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 103 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 162
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
+MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++D A RH LR G LG+
Sbjct: 163 HVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGV 222
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE 215
KVKIML K Q LPD++T+ KE
Sbjct: 223 KVKIMLP---KSMQDEEEILPDVITVLEPKE 250
>gi|340056073|emb|CCC50402.1| putative 40S ribosomal protein S3 [Trypanosoma vivax Y486]
gi|340057730|emb|CCC52077.1| putative 40S ribosomal protein S3 [Trypanosoma vivax Y486]
Length = 214
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 156/211 (73%), Gaps = 13/211 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKR V DG+F+AEL E L RELA+DG++GVE RVTP RTEI+IRAT+T+ VLGEK R
Sbjct: 4 ISKKRMMVRDGIFYAELFEFLKRELADDGFAGVEHRVTPQRTEIVIRATKTREVLGEKNR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E V+LYAE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACIQQRFNYKEGKVQLYAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
+MESGAKGCEV V GK++ QRAKSM F+DGYMI SG ++ +A RH LR G +G+
Sbjct: 124 LVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVSTATRHCHLRAGTIGV 183
Query: 185 KVKIML-----EWDQKGKQGPTTPLPDLVTI 210
KVKIML E D+ LPD+VT+
Sbjct: 184 KVKIMLPNSMVEEDE--------VLPDVVTV 206
>gi|342184715|emb|CCC94197.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 159/211 (75%), Gaps = 13/211 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA DG++GVE RVTP+RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMMVRDGVFYAELFEFLKRELAVDGFAGVEHRVTPMRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+ E+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFNYKEGKLQLFVERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV + GK++ QRAKSM F+DGYMI SG ++D+A+RH LR G +G+
Sbjct: 124 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDAAIRHCHLRAGTIGV 183
Query: 185 KVKI-----MLEWDQKGKQGPTTPLPDLVTI 210
KVKI MLE ++ LPD+VT+
Sbjct: 184 KVKIMRPTSMLEEEE--------VLPDVVTV 206
>gi|71748612|ref|XP_823361.1| 40S ribosomal protein S3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|449802224|pdb|3ZEY|X Chain X, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|70833029|gb|EAN78533.1| 40S ribosomal protein S3, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261333299|emb|CBH16294.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 214
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 121/211 (57%), Positives = 158/211 (74%), Gaps = 13/211 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA+DG++GVE RVTP RTEI+IR+T+T+ VLGEKGR
Sbjct: 4 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV + GK++ QRAKSM F+DGYMI SG ++D+A RH LR G +G+
Sbjct: 124 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGV 183
Query: 185 KVKI-----MLEWDQKGKQGPTTPLPDLVTI 210
VKI M+E D+ LPD++T+
Sbjct: 184 NVKIMRPQSMIEEDE--------VLPDVITV 206
>gi|342183330|emb|CCC92810.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 159/211 (75%), Gaps = 13/211 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA DG++GVE RVTP+RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMMVRDGVFYAELFEFLKRELAVDGFAGVEHRVTPMRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+ E+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFNYKEGKLQLFVERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV + GK++ QRAKSM F+DGYMI SG ++D+A+RH LR G +G+
Sbjct: 124 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDAAIRHCHLRAGTIGV 183
Query: 185 KVKI-----MLEWDQKGKQGPTTPLPDLVTI 210
KVKI MLE ++ LPD+VT+
Sbjct: 184 KVKIMRPTSMLEEEE--------VLPDVVTV 206
>gi|261331251|emb|CBH14241.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 266
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/211 (57%), Positives = 158/211 (74%), Gaps = 13/211 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA+DG++GVE RVTP RTEI+IR+T+T+ VLGEKGR
Sbjct: 56 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 115
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 116 RIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 175
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV + GK++ QRAKSM F+DGYMI SG ++D+A RH LR G +G+
Sbjct: 176 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGV 235
Query: 185 KVKI-----MLEWDQKGKQGPTTPLPDLVTI 210
VKI M+E D+ LPD++T+
Sbjct: 236 NVKIMRPQSMIEEDE--------VLPDVITV 258
>gi|294939314|ref|XP_002782408.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239894014|gb|EER14203.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 244
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 146/178 (82%), Gaps = 1/178 (0%)
Query: 56 QNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV 115
+ VLGEKGRRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL V
Sbjct: 46 RKVLGEKGRRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPV 105
Query: 116 RRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV 175
RRA YGVLRF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V
Sbjct: 106 RRAAYGVLRFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNV 165
Query: 176 LLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE-VYVAPATATSIELPVA 232
+RQG+LGI+VKIM+ +D +GK GP T LPD +TIH KE+ V+ AT T E PVA
Sbjct: 166 DMRQGILGIRVKIMMAYDPEGKSGPKTRLPDDITIHEPKEDTVFPIEATTTEEEAPVA 223
>gi|71744718|ref|XP_826989.1| 40S ribosomal protein S3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831154|gb|EAN76659.1| 40S ribosomal protein S3, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 266
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/211 (57%), Positives = 158/211 (74%), Gaps = 13/211 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA+DG++GVE RVTP RTEI+IR+T+T+ VLGEKGR
Sbjct: 56 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 115
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 116 RIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 175
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV + GK++ QRAKSM F+DGYMI SG ++D+A RH LR G +G+
Sbjct: 176 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGV 235
Query: 185 KVKI-----MLEWDQKGKQGPTTPLPDLVTI 210
VKI M+E D+ LPD++T+
Sbjct: 236 NVKIMRPQSMIEEDE--------VLPDVITV 258
>gi|183398092|gb|ACC62506.1| ribosomal protein S3 (predicted) [Rhinolophus ferrumequinum]
Length = 163
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/157 (80%), Positives = 134/157 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK KFV DG+F A+ E LTRELAEDGYSGVEVR+T RTEIII ATRTQNVLG
Sbjct: 1 MATQISKKWKFVVDGIFKAQWYEFLTRELAEDGYSGVEVRLTLTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+ IRELT+VVQKRF FPE+SVELYAEKV R LCAI QAESL +KLLGGLAVRR CY
Sbjct: 61 EKGQSIRELTAVVQKRFGFPESSVELYAEKVATRSLCAIGQAESLHHKLLGGLAVRRTCY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM 157
GVL+FIMESGAKG EV VSGKLR QRAKSM F DG M
Sbjct: 121 GVLQFIMESGAKGGEVGVSGKLRGQRAKSMMFVDGLM 157
>gi|226482822|emb|CAX79378.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 202
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/180 (68%), Positives = 145/180 (80%)
Query: 38 EVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLC 97
+VR + TE+II AT+TQ+VLGE RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL
Sbjct: 12 KVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLS 71
Query: 98 AIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM 157
AIAQAESLRYKL GL VR+ACYG+LRFIMESGA+G EVIVSGK++ QRAK+MKF DG M
Sbjct: 72 AIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLM 131
Query: 158 ISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
I SG PVN Y+D AVRHV L QG+LGIKVKIM++ D GK+GP PLPD VTI KEEV
Sbjct: 132 IHSGDPVNYYVDKAVRHVQLPQGILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEEV 191
>gi|162605846|ref|XP_001713438.1| 40S ribosomal protein S3 [Guillardia theta]
gi|13794370|gb|AAK39747.1|AF083031_104 40S ribosomal protein S3 [Guillardia theta]
Length = 218
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 160/210 (76%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ ++S K+KFVADGV ++E+NE L REL E+G+SG++++ + EIII++++ ++G
Sbjct: 2 LGYRLSLKKKFVADGVVYSEINEFLERELKENGFSGIKIKKKIEKVEIIIKSSKAHTIIG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KG+RIREL +++KRF F EN + LY EK+NNR LC I QAESLRYK+L G +R+ACY
Sbjct: 62 FKGKRIRELNVLLKKRFNFGENKLVLYVEKINNRNLCPINQAESLRYKILRGFVLRKACY 121
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
+LR +E+GAKGC + VSGKLRAQRAK+MKF DGY+I SG+P EY SA+RH LL QG
Sbjct: 122 SILRSTIEAGAKGCIISVSGKLRAQRAKTMKFMDGYIIHSGKPSEEYTKSAIRHCLLPQG 181
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
V+GIK+ IML WD G GP PLPD++T+
Sbjct: 182 VIGIKISIMLPWDPCGLIGPKKPLPDVITL 211
>gi|90076128|dbj|BAE87744.1| unnamed protein product [Macaca fascicularis]
gi|90076700|dbj|BAE88030.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/133 (91%), Positives = 124/133 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKG 133
GVLRFIMESGAKG
Sbjct: 121 GVLRFIMESGAKG 133
>gi|229594319|ref|XP_001030083.3| KH domain containing protein [Tetrahymena thermophila]
gi|319443358|pdb|2XZM|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
gi|319443393|pdb|2XZN|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
gi|225566935|gb|EAR82420.3| KH domain containing protein [Tetrahymena thermophila SB210]
gi|315570297|tpg|DAA33967.1| TPA_exp: 40S ribosomal protein rpS3e [Tetrahymena thermophila]
Length = 243
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/213 (52%), Positives = 160/213 (75%), Gaps = 2/213 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
I+KK+KFVADGVF AEL+ ++ L + GY+G+EVR TP +TEI I+AT+ Q V+G +G+
Sbjct: 8 INKKKKFVADGVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGK 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+ +ELT +QKRF + ++ ++++AE + +GLCA AQ E++ YKLL + VR A +++
Sbjct: 68 KHKELTQFLQKRFGYSDDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIK 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
+++ GAKGCE+I+SGKL+ QRAK+MKFK GYMI +GQP N+YID AVRHV +QG++G+
Sbjct: 128 SVIQDGAKGCEIIISGKLKQQRAKTMKFKQGYMICTGQPKNDYIDVAVRHVFFKQGIMGV 187
Query: 185 KVKIMLEWDQK--GKQGPTTPLPDLVTIHPLKE 215
KVKIML ++ K G TP+PD V IHP K+
Sbjct: 188 KVKIMLPYEPNPAKKFGVKTPIPDNVIIHPPKQ 220
>gi|340505471|gb|EGR31795.1| hypothetical protein IMG5_102040 [Ichthyophthirius multifiliis]
Length = 676
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/213 (53%), Positives = 159/213 (74%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QI+KK+KFVADGVF AEL+ ++ L + GY+G+EVR TP++ EI I+AT+ Q+V+G +G
Sbjct: 7 QINKKKKFVADGVFNAELHCFFSKSLQDAGYAGIEVRRTPMKIEIRIKATKPQHVIGLEG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
++ +ELT +QKRF + + +++ AE V N+GLCA AQ E+L YKLL + VR A ++
Sbjct: 67 KKHKELTYFLQKRFGYANDQLQILAEPVKNKGLCASAQVEALNYKLLKDVPVRLAANYII 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
R ++ GAKGCEVI+SGKL+ QRAK+MKFK GYMI +GQP +Y+D AVRHV +QG++G
Sbjct: 127 RQVINDGAKGCEVIISGKLQQQRAKTMKFKQGYMICTGQPRKDYVDVAVRHVFFKQGIMG 186
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
+KVKIML +D GK G TP+PD V I+ K +
Sbjct: 187 VKVKIMLPYDPTGKFGVRTPIPDNVVINEPKRD 219
>gi|326901602|gb|AEA10079.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
Length = 194
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/149 (78%), Positives = 124/149 (83%)
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLRFIM
Sbjct: 1 ELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIM 60
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGVLGIKVK
Sbjct: 61 ESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKVK 120
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
IM D GK GP LPD VTI KEE
Sbjct: 121 IMRGSDPDGKAGPQKTLPDAVTIIESKEE 149
>gi|326901586|gb|AEA10071.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901588|gb|AEA10072.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901590|gb|AEA10073.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901592|gb|AEA10074.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901594|gb|AEA10075.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901596|gb|AEA10076.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901598|gb|AEA10077.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901600|gb|AEA10078.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901604|gb|AEA10080.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901606|gb|AEA10081.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901608|gb|AEA10082.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901610|gb|AEA10083.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901612|gb|AEA10084.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901614|gb|AEA10085.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901616|gb|AEA10086.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901618|gb|AEA10087.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901620|gb|AEA10088.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901622|gb|AEA10089.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901624|gb|AEA10090.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901626|gb|AEA10091.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901628|gb|AEA10092.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901630|gb|AEA10093.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901632|gb|AEA10094.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901634|gb|AEA10095.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901636|gb|AEA10096.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901638|gb|AEA10097.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901640|gb|AEA10098.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901642|gb|AEA10099.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901644|gb|AEA10100.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901646|gb|AEA10101.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901648|gb|AEA10102.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901650|gb|AEA10103.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901652|gb|AEA10104.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901654|gb|AEA10105.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901656|gb|AEA10106.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901658|gb|AEA10107.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901660|gb|AEA10108.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901662|gb|AEA10109.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901664|gb|AEA10110.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901666|gb|AEA10111.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901668|gb|AEA10112.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901670|gb|AEA10113.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901672|gb|AEA10114.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901674|gb|AEA10115.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901676|gb|AEA10116.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901678|gb|AEA10117.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901680|gb|AEA10118.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901682|gb|AEA10119.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901684|gb|AEA10120.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901686|gb|AEA10121.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901688|gb|AEA10122.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901690|gb|AEA10123.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901692|gb|AEA10124.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901694|gb|AEA10125.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901696|gb|AEA10126.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901698|gb|AEA10127.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901700|gb|AEA10128.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901702|gb|AEA10129.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901704|gb|AEA10130.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901706|gb|AEA10131.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901708|gb|AEA10132.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901710|gb|AEA10133.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901712|gb|AEA10134.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901714|gb|AEA10135.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901716|gb|AEA10136.1| 40S ribosomal protein S3 [Leptographium longiclavatum]
gi|326901718|gb|AEA10137.1| 40S ribosomal protein S3 [Leptographium longiclavatum]
gi|326901720|gb|AEA10138.1| 40S ribosomal protein S3 [Leptographium wingfieldii]
gi|326901722|gb|AEA10139.1| 40S ribosomal protein S3 [Leptographium wingfieldii]
gi|326901724|gb|AEA10140.1| 40S ribosomal protein S3 [Grosmannia aurea]
Length = 194
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/149 (78%), Positives = 124/149 (83%)
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLRFIM
Sbjct: 1 ELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIM 60
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP ++IDSA RHVLLRQGVLGIKVK
Sbjct: 61 ESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKVK 120
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
IM D GK GP LPD VTI KEE
Sbjct: 121 IMRGSDPDGKAGPQKTLPDAVTIIEPKEE 149
>gi|444731980|gb|ELW72307.1| Calcium-binding protein 39-like protein [Tupaia chinensis]
Length = 518
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/204 (61%), Positives = 147/204 (72%), Gaps = 5/204 (2%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
+ K+KF ADG+F AELNE TRELAED SG+EVRVTP RTEII+ ATRTQNVLGEKG R
Sbjct: 109 TSKKKFDADGIFKAELNEFRTRELAEDRCSGLEVRVTPTRTEIIVLATRTQNVLGEKGPR 168
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR----ACYG 121
I+E T+V+ KR FPE SVELYAEKV RGLCAIAQAESLRY+LL GLA RR AC
Sbjct: 169 IQESTAVIPKRSGFPEGSVELYAEKVATRGLCAIAQAESLRYRLLEGLAGRRPATCACCA 228
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VL F +SGA GCE +VS K R QRAK+++F DG +I SG VN Y+D+ VRHVLLR+
Sbjct: 229 VLWFFTDSGATGCEAVVSQKRRGQRAKALRFVDGLVIDSGDRVNYYVDTNVRHVLLRRCA 288
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLP 205
G + + WD + TP P
Sbjct: 289 -GHQGEDRAAWDPSVRLALRTPCP 311
>gi|148684439|gb|EDL16386.1| ribosomal protein S3, isoform CRA_a [Mus musculus]
Length = 135
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/127 (88%), Positives = 117/127 (92%)
Query: 54 RTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL 113
RTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGL
Sbjct: 8 RTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGL 67
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVR 173
AVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVR
Sbjct: 68 AVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 127
Query: 174 HVLLRQG 180
HVLLRQG
Sbjct: 128 HVLLRQG 134
>gi|379072592|gb|AFC92928.1| ribosomal protein S3B, partial [Hymenochirus curtipes]
Length = 152
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/161 (73%), Positives = 125/161 (77%), Gaps = 12/161 (7%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQA LAVRRACYGVLRF
Sbjct: 1 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQA----------LAVRRACYGVLRF 50
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEV+VSGKLR QRAK+MKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIK
Sbjct: 51 IMESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 110
Query: 186 VKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
VKIML WD GK GP PLPD V+I KEE+ P T S
Sbjct: 111 VKIMLPWDPSGKIGPKKPLPDHVSIVEPKEEIL--PTTPIS 149
>gi|41057930|gb|AAR98922.1| ribosomal protein S3, partial [Ostrinia nubilalis]
gi|441415027|dbj|BAM74497.1| ribosomal protein S3, partial [Ostrinia scapulalis]
Length = 125
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 111/124 (89%), Positives = 116/124 (93%)
Query: 29 LAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYA 88
LAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEKGRRIRELTSVVQKRF PE SVELYA
Sbjct: 1 LAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYA 60
Query: 89 EKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAK 148
EKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEV+VSGKLR QRAK
Sbjct: 61 EKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAK 120
Query: 149 SMKF 152
SMKF
Sbjct: 121 SMKF 124
>gi|441645490|ref|XP_003254540.2| PREDICTED: 40S ribosomal protein S3 [Nomascus leucogenys]
Length = 181
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/148 (75%), Positives = 121/148 (81%), Gaps = 2/148 (1%)
Query: 79 FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
+P ++LYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+V
Sbjct: 17 YPLLPLKLYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVV 76
Query: 139 SGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQ 198
SGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKVKIML WD GK
Sbjct: 77 SGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKI 136
Query: 199 GPTTPLPDLVTIHPLKEEVYVAPATATS 226
GP PLPD V+I K+E+ P T S
Sbjct: 137 GPKKPLPDHVSIVEPKDEIL--PTTPIS 162
>gi|3642663|gb|AAC36521.1| ribosomal protein S3, partial [Mus musculus]
Length = 123
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/123 (88%), Positives = 113/123 (91%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRF
Sbjct: 1 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 60
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIK
Sbjct: 61 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 120
Query: 186 VKI 188
VKI
Sbjct: 121 VKI 123
>gi|9022435|gb|AAF82383.1|AF281313_1 ribosomal protein S3 [Homo sapiens]
Length = 158
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/141 (78%), Positives = 117/141 (82%), Gaps = 2/141 (1%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQ 145
LYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR Q
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLP 205
RAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKVKIML WD GK GP PLP
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 206 DLVTIHPLKEEVYVAPATATS 226
D V+I K+E+ P T S
Sbjct: 121 DHVSIVEPKDEIL--PTTPIS 139
>gi|226508400|ref|NP_001142180.1| uncharacterized protein LOC100274348 [Zea mays]
gi|194707500|gb|ACF87834.1| unknown [Zea mays]
gi|413921204|gb|AFW61136.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 133
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/124 (89%), Positives = 118/124 (95%), Gaps = 2/124 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR Y
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRR--Y 118
Query: 121 GVLR 124
++R
Sbjct: 119 NLIR 122
>gi|291238325|ref|XP_002739080.1| PREDICTED: ribosomal protein S3-like [Saccoglossus kowalevskii]
Length = 250
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/141 (77%), Positives = 118/141 (83%), Gaps = 2/141 (1%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQ 145
LYAEKV RGLCAIAQ ESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR Q
Sbjct: 71 LYAEKVAARGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 130
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLP 205
RAKSMKF DG MI SG PVN+Y+D+AVRHV+LRQGVLGIKVKIML WD GK GP PLP
Sbjct: 131 RAKSMKFVDGLMIHSGNPVNDYVDTAVRHVMLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 190
Query: 206 DLVTIHPLKEEVYVAPATATS 226
D V+I K++ V P+T S
Sbjct: 191 DHVSIVEPKDD--VVPSTPIS 209
>gi|223947579|gb|ACN27873.1| unknown [Zea mays]
gi|413917292|gb|AFW57224.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 127
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/117 (93%), Positives = 114/117 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRR 117
>gi|123444699|ref|XP_001311117.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123456864|ref|XP_001316164.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123476890|ref|XP_001321615.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123483338|ref|XP_001324008.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|154413076|ref|XP_001579569.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|154415577|ref|XP_001580813.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|121892915|gb|EAX98187.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121898863|gb|EAY03941.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121904445|gb|EAY09392.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121906883|gb|EAY11785.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121913777|gb|EAY18583.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121915034|gb|EAY19827.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
Length = 216
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 150/214 (70%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A + +K R+ + G+F+AELNE+LTREL ++GY G EVR TP RTEIII+A T+ +
Sbjct: 3 AQRCTKVRRIIETGLFYAELNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFVDN 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
GRR++E+ ++QKR++ E+S+E++ +++ +GL A+ Q ESLRYKL+ + RRA Y
Sbjct: 63 HGRRLQEVRMMIQKRWRLKEDSLEIFIDRIQRKGLSALNQLESLRYKLIARIPARRAAYS 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
++RF+M++GA+GCEV +SGKLR RA + K+K+GYM+ SG +++ AV H+ ++Q
Sbjct: 123 IIRFVMDAGARGCEVAISGKLRGARASTSKYKEGYMVKSGDVTKQFVTQAVGHIPMKQAT 182
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE 215
+GI+V IML D G GP PD++ +H K+
Sbjct: 183 IGIRVLIMLAQDPSGISGPKESQPDVIKVHEAKD 216
>gi|351707112|gb|EHB10031.1| 40S ribosomal protein S3 [Heterocephalus glaber]
Length = 127
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/125 (87%), Positives = 112/125 (89%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAV RACYGVL F
Sbjct: 2 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVLRACYGVLWF 61
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEV VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIK
Sbjct: 62 IMESGAKGCEVFVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 121
Query: 186 VKIML 190
VKIML
Sbjct: 122 VKIML 126
>gi|393905485|gb|EJD73988.1| 40S ribosomal protein S3, variant [Loa loa]
Length = 183
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/140 (77%), Positives = 120/140 (85%), Gaps = 3/140 (2%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 7 QMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRRACYGVL
Sbjct: 67 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVL 126
Query: 124 RFIMESGAKGCEVIVSGKLR 143
RFIMES A+GCE+ GK R
Sbjct: 127 RFIMESNAQGCEI---GKWR 143
>gi|145536261|ref|XP_001453858.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421591|emb|CAK86461.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/207 (52%), Positives = 148/207 (71%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A Q++KK+KFVADGVF AEL+ L+R L + GY+G VR TPV+T+I I+A T V G
Sbjct: 4 ARQMNKKKKFVADGVFQAELHSFLSRALTDAGYAGFVVRTTPVQTDIEIKAANTAGVTGP 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GR++RELTS++QKRF + + +++L +V ++GLCA AQAESL+ KLL + VR A
Sbjct: 64 EGRKLRELTSLIQKRFGYAKEALQLIVARVQSKGLCAPAQAESLKTKLLAQVPVRTAANA 123
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VL+ IM GA G E I+SGKL QRAKSMK++ GY+IS+GQP + ID AVRH +QG+
Sbjct: 124 VLKQIMADGAIGAECIISGKLGQQRAKSMKYRAGYIISTGQPKKDLIDVAVRHCFFKQGI 183
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLV 208
+G+KVKI +D GK+G +PD V
Sbjct: 184 IGVKVKIYRPYDPSGKKGIPIEVPDKV 210
>gi|159145672|gb|ABW90373.1| putative ribosomal protein S3 [Sipunculus nudus]
Length = 126
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/126 (84%), Positives = 113/126 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADG+F AELNE TRELAEDGYSGVEVRVTP RTEIII ATRTQ VLG
Sbjct: 1 MATQVSKKRKFVADGLFKAELNEFFTRELAEDGYSGVEVRVTPTRTEIIILATRTQQVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRIRELTSVVQKRF FPE +VELY +KV NRGLCAI Q ESLRYKL+GGLAV RACY
Sbjct: 61 DKGRRIRELTSVVQKRFNFPEGTVELYVQKVANRGLCAITQCESLRYKLIGGLAVTRACY 120
Query: 121 GVLRFI 126
GVLRFI
Sbjct: 121 GVLRFI 126
>gi|403340419|gb|EJY69494.1| 40S ribosomal protein S3 [Oxytricha trifallax]
Length = 243
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 161/220 (73%), Gaps = 7/220 (3%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+I+ K+KFVADGVF AELNE LTR L DGY+G+EVR T + TEI ++AT+T+ +L +
Sbjct: 11 KINTKKKFVADGVFQAELNEFLTRCLGMDGYAGIEVRATSMSTEIRVKATKTREILEKSA 70
Query: 64 RRIRELTSVVQKRFKFPE--NSVELYAEKV-NNRGLCAIAQAESLRYKLLGGLAVRRACY 120
R++REL S+++KR+ F + N VEL + + ++ LCA AQAE+L+YKLLGG VR A
Sbjct: 71 RKVRELKSLIEKRYNFNDVDNKVELAIKPLPYDKNLCAAAQAENLKYKLLGGTPVRLAAN 130
Query: 121 GVLRFIME-SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
+L +M+ GAKGCE+I+SGK+R QRAKS K+K GY+IS+GQP E++D AVRHV LRQ
Sbjct: 131 NILAQVMKRGGAKGCEIIISGKIRGQRAKSQKYKQGYIISTGQPKLEFVDEAVRHVELRQ 190
Query: 180 GVLGIKVKIMLEWDQK-GKQGPTTPLPDLVTIHPLKEEVY 218
GVLG+KVKI+ + ++ GK +PD V IH K++ +
Sbjct: 191 GVLGVKVKILPDTERAVGKYRKI--MPDYVKIHEPKDDHH 228
>gi|145541820|ref|XP_001456598.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424410|emb|CAK89201.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 147/205 (71%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q++KK+KFVADGVF AEL+ L+R L + GY+G VR TPV+T+I I+A T V G +G
Sbjct: 6 QMNKKKKFVADGVFQAELHSFLSRALTDAGYAGFVVRTTPVQTDIEIKAANTAGVTGPEG 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
R++RELTS++QKRF + + +++L +V ++GLCA AQAESL+ KLL + VR A VL
Sbjct: 66 RKLRELTSLIQKRFGYAKEALQLIVARVQSKGLCAPAQAESLKTKLLAQVPVRTAANAVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
+ IM GA G E I+SGKL QRAKSMK++ GY+IS+GQP + ID AVRH +QG++G
Sbjct: 126 KQIMADGAIGAECIISGKLGQQRAKSMKYRAGYIISTGQPKKDLIDVAVRHCFFKQGIIG 185
Query: 184 IKVKIMLEWDQKGKQGPTTPLPDLV 208
+KVKI +D GK+G +PD V
Sbjct: 186 VKVKIYRPYDPSGKKGIPIEVPDKV 210
>gi|215260015|gb|ACJ64492.1| 40S ribosomal protein S3 [Culex tarsalis]
Length = 165
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/137 (76%), Positives = 113/137 (82%), Gaps = 1/137 (0%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQ 145
+YAEKV RGLCA AQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR Q
Sbjct: 1 MYAEKVATRGLCATAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLP 205
RAKSMKF DG MI SG P NEY+D+A RHVLLRQGVLGIKVKIML WD GK GP PLP
Sbjct: 61 RAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPKKPLP 120
Query: 206 DLVT-IHPLKEEVYVAP 221
D V+ + P E +Y P
Sbjct: 121 DNVSVVEPKDEIMYSTP 137
>gi|70909549|emb|CAJ17196.1| ribosomal protein S3e [Mycetophagus quadripustulatus]
Length = 158
Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 102/132 (77%), Positives = 112/132 (84%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQ 145
LY EKV NRGLCAIAQAESLR+KL+GGLAVRRACYGVLR+IME GAKGCEV+VSGKLR Q
Sbjct: 2 LYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACYGVLRYIMECGAKGCEVVVSGKLRGQ 61
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLP 205
RAKSMKF DG MI SG P N+Y+D+A RHVLLRQGVLGIKVKIML WD GK GP PLP
Sbjct: 62 RAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKVKIMLPWDPTGKTGPKRPLP 121
Query: 206 DLVTIHPLKEEV 217
D V++ KEE+
Sbjct: 122 DNVSVVEPKEEI 133
>gi|407844367|gb|EKG01924.1| 40S ribosomal protein S3, putative, partial [Trypanosoma cruzi]
Length = 160
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/157 (65%), Positives = 128/157 (81%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSG 161
+MESGAKGCEV V GK++ QRAKSM F+DGYMI SG
Sbjct: 124 HVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSG 160
>gi|255710087|gb|ACU30863.1| 40S ribosomal protein S3 [Ochlerotatus triseriatus]
Length = 157
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/135 (77%), Positives = 112/135 (82%), Gaps = 1/135 (0%)
Query: 88 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRA 147
AEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRA
Sbjct: 1 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 60
Query: 148 KSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDL 207
KSMKF DG MI SG P NEY+D+A RHVLLRQGVLGIKVKIML WD GK GP PLPD
Sbjct: 61 KSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPKKPLPDN 120
Query: 208 VT-IHPLKEEVYVAP 221
V+ + P E +Y P
Sbjct: 121 VSVVEPKDEIMYSTP 135
>gi|239505101|gb|ACR78696.1| ribosomal protein S3 [Rimicaris exoculata]
Length = 126
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/126 (82%), Positives = 112/126 (88%)
Query: 43 PVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQA 102
P RTEIII ATRTQNVLGE+GRRIRELTS+VQKRF F + +VELYAEKV RGLCAIAQA
Sbjct: 1 PARTEIIILATRTQNVLGEEGRRIRELTSLVQKRFGFADGTVELYAEKVAQRGLCAIAQA 60
Query: 103 ESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQ 162
ESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+
Sbjct: 61 ESLRYKLVGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFTDGLMIHSGE 120
Query: 163 PVNEYI 168
P Y+
Sbjct: 121 PRRHYV 126
>gi|323307522|gb|EGA60793.1| Rps3p [Saccharomyces cerevisiae FostersO]
Length = 184
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/163 (64%), Positives = 133/163 (81%), Gaps = 3/163 (1%)
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+ GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 5 KNGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 64
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++ID+A RHVL+RQG
Sbjct: 65 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQG 124
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPA 222
VLGIKVKIM + K + GP LPD VT I P +EE +AP+
Sbjct: 125 VLGIKVKIMRD-PAKSRTGPKA-LPDAVTIIEPKEEEPILAPS 165
>gi|443917610|gb|ELU38287.1| 40S ribosomal protein S3 [Rhizoctonia solani AG-1 IA]
Length = 592
Score = 212 bits (540), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 124/271 (45%), Positives = 157/271 (57%), Gaps = 49/271 (18%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEI-----IIRATRT 55
MA+QISKKRKFVADGVF AEL E TRELAE+GYSG EVRVT RTE+ + A+
Sbjct: 285 MASQISKKRKFVADGVFRAELGEFFTRELAEEGYSGCEVRVTHARTEVSLSPETLYASGF 344
Query: 56 QNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVN--------NRGLCAIAQAESLRY 107
N G R+ + +V K + ++ + +++ R +C + + ++ +
Sbjct: 345 PNARLNFGNRLSSVR-LVPKMYSVKRDAGSGSSRRLSKSGSSSPKTRSICMLKRCRAVVF 403
Query: 108 KLL----------------------------------GGLAVRRACYGVLRFIMESGAKG 133
+LL G ++ ACYGVLRF+MESGAKG
Sbjct: 404 RLLRSASRCGTSYWVDSLFVGEFDSSFGCARGVGADSPGGNLKSACYGVLRFVMESGAKG 463
Query: 134 CEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWD 193
CEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHVLLRQGVLGIKVKIM WD
Sbjct: 464 CEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQGVLGIKVKIMKGWD 523
Query: 194 QKGKQGPTTPLPDLVTIH-PLKEEVYVAPAT 223
G GP PLPD VTI P ++V P +
Sbjct: 524 PTGNLGPKKPLPDTVTIQEPPIDKVVAEPTS 554
>gi|308802702|ref|XP_003078664.1| Putative 40S ribosomal protein; contains C-terminal domain (ISS)
[Ostreococcus tauri]
gi|116057117|emb|CAL51544.1| Putative 40S ribosomal protein; contains C-terminal domain (ISS)
[Ostreococcus tauri]
Length = 120
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/117 (88%), Positives = 110/117 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVRVTP+RTEIIIRATRT NVLG
Sbjct: 1 MATNISKKRKFVADGVFFAELNEMLVRELAEDGYSGVEVRVTPMRTEIIIRATRTANVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELT++VQ+RF F E +VELYAEKVNNRGLCAIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTTLVQRRFGFAEGTVELYAEKVNNRGLCAIAQCESLRYKLLGGLAVRR 117
>gi|149068846|gb|EDM18398.1| rCG40478, isoform CRA_h [Rattus norvegicus]
Length = 151
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/117 (90%), Positives = 108/117 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>gi|432099483|gb|ELK28641.1| 40S ribosomal protein S3 [Myotis davidii]
Length = 165
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 109/167 (65%), Positives = 129/167 (77%), Gaps = 5/167 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA +ISKKRK VADG+F AELN+ LT+ELAEDGYSGVE++VTP +TEIII ATR QNVL
Sbjct: 1 MAVKISKKRKLVADGIFKAELNKFLTQELAEDGYSGVEIQVTPTKTEIIIWATRMQNVLS 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGL--CAIAQAESLRYKLLGGLAVRRA 118
E G+++ ELT++VQKRF E SV+ Y E V +GL CA AQAESL YKLLGGLA+ A
Sbjct: 61 ETGQQLWELTAMVQKRFGNSEGSVDFYDETVATKGLLVCATAQAESLHYKLLGGLAMLWA 120
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVN 165
Y +L+FIMES AKGC+V+VS K QRAKSMKF +G M G PVN
Sbjct: 121 FYSMLQFIMESRAKGCKVMVSEKHLGQRAKSMKFVNGLM---GDPVN 164
>gi|410040211|ref|XP_003950757.1| PREDICTED: 40S ribosomal protein S3-A-like [Pan troglodytes]
gi|410040213|ref|XP_003950758.1| PREDICTED: 40S ribosomal protein S3-A-like [Pan troglodytes]
gi|410040215|ref|XP_003950759.1| PREDICTED: 40S ribosomal protein S3-A-like [Pan troglodytes]
Length = 122
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/122 (85%), Positives = 110/122 (90%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+NE LT+ELAEDGYSGVE+RVTP RTEIII ATRTQNVLGEKG RIRELT+VVQKRF P
Sbjct: 1 MNEFLTQELAEDGYSGVEMRVTPTRTEIIILATRTQNVLGEKGWRIRELTAVVQKRFGSP 60
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
E SVELYAEKV RGLCAIAQAESL YKLLGGLAVRRACYG L FIME+GAKGCEV+VSG
Sbjct: 61 EGSVELYAEKVATRGLCAIAQAESLPYKLLGGLAVRRACYGALWFIMETGAKGCEVVVSG 120
Query: 141 KL 142
KL
Sbjct: 121 KL 122
>gi|426369813|ref|XP_004051878.1| PREDICTED: 40S ribosomal protein S3 isoform 5 [Gorilla gorilla
gorilla]
Length = 154
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/132 (78%), Positives = 110/132 (83%), Gaps = 2/132 (1%)
Query: 95 GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKD 154
GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF D
Sbjct: 6 GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVD 65
Query: 155 GYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLK 214
G MI SG PVN Y+D+AVRHVLLRQGVLGIKVKIML WD GK GP PLPD V+I K
Sbjct: 66 GLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPK 125
Query: 215 EEVYVAPATATS 226
+E+ P T S
Sbjct: 126 DEIL--PTTPIS 135
>gi|395833096|ref|XP_003789581.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Otolemur
garnettii]
gi|395833098|ref|XP_003789582.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Otolemur
garnettii]
Length = 123
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/123 (86%), Positives = 110/123 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVAD +F AELNE LTRE+AEDGYSGVEVRVTP RT III ATRT+NVLG
Sbjct: 1 MAVQISKKRKFVADDIFKAELNEFLTREVAEDGYSGVEVRVTPTRTAIIILATRTRNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGR IRELT+VVQKRF FPE SVELYAEK RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRCIRELTAVVQKRFGFPEGSVELYAEKGATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVL 123
GVL
Sbjct: 121 GVL 123
>gi|152061033|gb|AAI50502.1| RPS3 protein [Homo sapiens]
Length = 133
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%)
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM
Sbjct: 12 ELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 71
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGV V
Sbjct: 72 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVWDTSVH 131
Query: 188 I 188
+
Sbjct: 132 L 132
>gi|410039268|ref|XP_003950581.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-like [Pan
troglodytes]
Length = 238
Score = 206 bits (523), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 123/227 (54%), Positives = 147/227 (64%), Gaps = 10/227 (4%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M QISKKRKFV DG+ EL + TRELAEDGYSGVEV++ RTEIII AT+TQNVLG
Sbjct: 1 MGVQISKKRKFVTDGILKVELKKFXTRELAEDGYSGVEVQIMSTRTEIIILATKTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG +I++L +VVQKR PE SVEL+A KV RG+C A ES Y LLGGLA +RAC
Sbjct: 61 EKGWQIQKLPAVVQKRSGXPEGSVELFAGKVATRGMCVFAXVESQCY-LLGGLAAQRACC 119
Query: 121 GVLRFIMES-GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
GVL FI GA G + +VS + +K KF D MI S V ID+A+ VLL+Q
Sbjct: 120 GVLWFIRRGXGATGFKAVVS-----ENSKCRKFVDDLMILSRNSVY-LIDTAMCQVLLQQ 173
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
GVL IK K+ML WD GK LP+ ++I K+EV P T S
Sbjct: 174 GVLAIKXKVMLPWDPAGKTDSRKALPEHMSIVEPKDEVL--PTTPXS 218
>gi|302142415|emb|CBI19618.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 127/206 (61%), Gaps = 64/206 (31%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRKF DGVFFA LNEVLTREL E+GYSG EVRVTP+ TEIIIRAT+T NVLGEKG+
Sbjct: 1 MSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLGEKGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+I+ELTS LLGGLA+
Sbjct: 61 KIKELTS-------------------------------------LLGGLAM--------- 74
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
L AQRAKSMKFKDGY+ISSGQPV +YID AVRHV LRQGVLGI
Sbjct: 75 -----------------LCAQRAKSMKFKDGYLISSGQPVKDYIDLAVRHV-LRQGVLGI 116
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI 210
KVKIM WD KGKQ TTPLPDLVTI
Sbjct: 117 KVKIMFNWDPKGKQSLTTPLPDLVTI 142
>gi|440906791|gb|ELR57014.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 220
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 125/188 (66%), Gaps = 28/188 (14%)
Query: 1 MATQISK-KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MA QISK + F DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRT+N L
Sbjct: 1 MAVQISKIESVFEEDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTENAL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
G++G RI+E T VVQKR FPE +V LYAEKV LCAI QAESL Y+L GGL V RA
Sbjct: 61 GKEGWRIQEFTVVVQKRCGFPECTVALYAEKVATGNLCAIVQAESLHYRLPGGLTVPRAY 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
YG LRFIM G K S PVN Y+D++ RHVLLRQ
Sbjct: 121 YGELRFIM--GPKAV-------------------------SEDPVNYYVDTSARHVLLRQ 153
Query: 180 GVLGIKVK 187
GVLGIKVK
Sbjct: 154 GVLGIKVK 161
>gi|89513159|gb|ABD74442.1| ribosomal protein S3 [Anopheles quadrimaculatus]
Length = 111
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/111 (87%), Positives = 101/111 (90%)
Query: 36 GVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRG 95
GVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF F +VELYAEKV RG
Sbjct: 1 GVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFDFAPGTVELYAEKVATRG 60
Query: 96 LCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQR 146
LCAIAQAESLR KL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QR
Sbjct: 61 LCAIAQAESLRCKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQR 111
>gi|384494103|gb|EIE84594.1| 40S ribosomal protein [Rhizopus delemar RA 99-880]
Length = 131
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/119 (81%), Positives = 106/119 (89%), Gaps = 1/119 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A QISKKRK VADGVF+AELNE LTRELAE GY+GVEVRVTP RTEIIIRAT TQNVLGE
Sbjct: 3 AVQISKKRK-VADGVFYAELNEFLTRELAEAGYAGVEVRVTPARTEIIIRATHTQNVLGE 61
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KGRRIRELT++VQKRFKFPEN+VELYAE+V NRGLCAIAQ ES+++KLL GLA CY
Sbjct: 62 KGRRIRELTTLVQKRFKFPENAVELYAERVQNRGLCAIAQCESVKFKLLNGLACLLRCY 120
>gi|256073701|ref|XP_002573167.1| 40S ribosomal protein S3 [Schistosoma mansoni]
gi|360045524|emb|CCD83072.1| putative 40s ribosomal protein S3 [Schistosoma mansoni]
Length = 152
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/150 (63%), Positives = 118/150 (78%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
EL+E L RELA+DGYS +VR + TE+II AT+TQ+VLGE RIREL SV+QKRF F
Sbjct: 3 ELDEFLKRELADDGYSASQVRESRKYTEVIILATKTQSVLGEDSLRIRELASVLQKRFGF 62
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ ++ L+ +K+ RGL AIAQAESLRYKL GL VR+ACYG+LRFI+ESGA+G VIVS
Sbjct: 63 SDCALGLFVDKMIFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIIESGARGVGVIVS 122
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYID 169
GK++ QRAK+MKF +G +I SG PVN YID
Sbjct: 123 GKIKDQRAKAMKFCNGLIIHSGDPVNNYID 152
>gi|303390809|ref|XP_003073635.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506]
gi|303302782|gb|ADM12275.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506]
Length = 227
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 138/202 (68%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
++F+ +G+ AEL E + L +G++ +E+R+ +II++ + +GEK R+++
Sbjct: 19 KRFMKNGLMNAELKEFFEKALVNEGFNTMELRMQETPIKIILKVAKPHEAIGEKKYRLKQ 78
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+V +R + P+ +VE+ EKV+ +GLCA+ QA +R K+LGG+ RR+ L+ +
Sbjct: 79 FQHLVAQRLEVPDENVEIIVEKVHEKGLCALIQANFIREKMLGGVQYRRSVNMALKAVRH 138
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
SGA+GC++IVSGKL+ QRAKS+KF+DG +I SG PV +YID+ V +QGV+GI+V+I
Sbjct: 139 SGAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGNPVKDYIDTGYATVETKQGVIGIQVRI 198
Query: 189 MLEWDQKGKQGPTTPLPDLVTI 210
ML +D +G GP+ PLPD +TI
Sbjct: 199 MLPYDPEGVLGPSYPLPDRITI 220
>gi|149391165|gb|ABR25600.1| 40S ribosomal protein S3 [Oryza sativa Indica Group]
Length = 108
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/101 (90%), Positives = 94/101 (93%)
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG
Sbjct: 1 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 60
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAP 221
VLGIKVKIML+WD KGK GPTTPLPDLVTIH KEE + P
Sbjct: 61 VLGIKVKIMLDWDPKGKVGPTTPLPDLVTIHAPKEEEELRP 101
>gi|226482852|emb|CAX79393.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482854|emb|CAX79394.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 138
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 101/124 (81%)
Query: 94 RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFK 153
RGL AIAQAESLRYKL GL VR+ACYG+LRFIMESGA+G EVIVSGK++ QRAK+MKF
Sbjct: 4 RGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKIKGQRAKAMKFC 63
Query: 154 DGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPL 213
DG MI SG PVN Y+D AVRHV L QG+LGIKVKIM++ D GK+GP PLPD VTI
Sbjct: 64 DGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAA 123
Query: 214 KEEV 217
KEEV
Sbjct: 124 KEEV 127
>gi|396082067|gb|AFN83679.1| 40S ribosomal protein S3 [Encephalitozoon romaleae SJ-2008]
Length = 216
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 135/202 (66%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
++F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+++
Sbjct: 8 KRFMKNGLINAELKEFFEKVLVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKLRLKQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+V +R + P+ +VE+ EKV+ +GLCA+ QA +R K+LGG+ RRA L+
Sbjct: 68 FQHLVAQRLEVPDENVEIIVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKATRH 127
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
SGA+GC++IVSGKL+ QRAKS+KF+DG +I SG V +YI++ V +QGV+GI+V+I
Sbjct: 128 SGAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGNAVKDYINTGYATVETKQGVIGIQVRI 187
Query: 189 MLEWDQKGKQGPTTPLPDLVTI 210
ML +D +G GP PLPD +TI
Sbjct: 188 MLPYDPEGVIGPNYPLPDRITI 209
>gi|401828611|ref|XP_003888019.1| 40S ribosomal protein S3 [Encephalitozoon hellem ATCC 50504]
gi|392999027|gb|AFM99038.1| 40S ribosomal protein S3 [Encephalitozoon hellem ATCC 50504]
Length = 216
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 135/202 (66%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
++F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+++
Sbjct: 8 KRFMKNGLINAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKIRLKQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+V +R + P+ +VE+ EKV+ +GLCA+ QA +R K+LGG+ RRA L+
Sbjct: 68 FQHLVAQRLEVPDENVEIVVEKVHEKGLCALIQANFIREKMLGGVQYRRAVNMALKATRH 127
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
SGA+GC++IVSGKL+ QRAKS+KF+DG +I SG VN+YI++ V +QG++GI+V+I
Sbjct: 128 SGAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGNAVNDYINTGYATVETKQGIIGIQVRI 187
Query: 189 MLEWDQKGKQGPTTPLPDLVTI 210
ML D +G GP+ LPD +TI
Sbjct: 188 MLPHDPEGVIGPSYALPDRITI 209
>gi|85014361|ref|XP_955676.1| 40S ribosomal protein S3 [Encephalitozoon cuniculi GB-M1]
gi|51701889|sp|Q8SQM3.1|RS3_ENCCU RecName: Full=40S ribosomal protein S3
gi|449330262|gb|AGE96522.1| 40S ribosomal protein S3 [Encephalitozoon cuniculi]
Length = 228
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 132/201 (65%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
+F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+R+
Sbjct: 21 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 80
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
+ +R + P+ SVE+ EKV+ +GLCA+ QA +R K+LGG+ RRA L+ +
Sbjct: 81 QHLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHA 140
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
A+GC++IVSGKL+ QRAKS+KF+DG +I SG V +YI++ V +QGV+GI+V+IM
Sbjct: 141 KAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIM 200
Query: 190 LEWDQKGKQGPTTPLPDLVTI 210
L +D +G GP PLPD +TI
Sbjct: 201 LPYDPEGVLGPNYPLPDRITI 221
>gi|392513001|emb|CAD27095.2| 40S RIBOSOMAL PROTEIN S3 [Encephalitozoon cuniculi GB-M1]
Length = 216
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 132/201 (65%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
+F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+R+
Sbjct: 9 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 68
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
+ +R + P+ SVE+ EKV+ +GLCA+ QA +R K+LGG+ RRA L+ +
Sbjct: 69 QHLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHA 128
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
A+GC++IVSGKL+ QRAKS+KF+DG +I SG V +YI++ V +QGV+GI+V+IM
Sbjct: 129 KAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIM 188
Query: 190 LEWDQKGKQGPTTPLPDLVTI 210
L +D +G GP PLPD +TI
Sbjct: 189 LPYDPEGVLGPNYPLPDRITI 209
>gi|294882949|ref|XP_002769895.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239873720|gb|EER02613.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 157
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/127 (66%), Positives = 102/127 (80%), Gaps = 1/127 (0%)
Query: 100 AQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMIS 159
AQAESLRYKLLGGL VRRA YGVLRF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S
Sbjct: 1 AQAESLRYKLLGGLPVRRAAYGVLRFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLS 60
Query: 160 SGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYV 219
+G P Y+D A+R+V +RQG+LGI+VKIM+ +D +GK GP T LPD +TIH KE+ V
Sbjct: 61 TGTPKEMYVDQAIRNVDMRQGILGIRVKIMMAYDPEGKSGPKTRLPDDITIHEPKEDT-V 119
Query: 220 APATATS 226
P AT+
Sbjct: 120 FPIEATT 126
>gi|224034403|gb|ACN36277.1| unknown [Zea mays]
gi|413917293|gb|AFW57225.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
gi|413917294|gb|AFW57226.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 103
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/103 (82%), Positives = 88/103 (85%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 60
Query: 187 KIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIEL 229
KIML+WD KGK GP TPLPDLVTIH K+E P E+
Sbjct: 61 KIMLDWDPKGKVGPITPLPDLVTIHTPKDEDEPRPPVLAPPEV 103
>gi|395539389|ref|XP_003771653.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-like
[Sarcophilus harrisii]
Length = 361
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/223 (51%), Positives = 132/223 (59%), Gaps = 38/223 (17%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M QI+KKR F ADG+F E E LTR++AEDGYSGV P RTEII+ ATRT +LG
Sbjct: 1 MVVQIAKKRNFAADGIFKPEX-EFLTRKVAEDGYSGVRY---PTRTEIILLATRT--LLG 54
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+ LT VVQK F FPE + A SL YKLLGGLAV RAC
Sbjct: 55 HX--KFVNLTPVVQK-FGFPE------------------SNATSLCYKLLGGLAVCRACC 93
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
G E G KGCE+++SGKLR QRAKSMKF D MI SG P+N YID AV +
Sbjct: 94 G------EWG-KGCEMVMSGKLRGQRAKSMKFVDVLMIQSGDPLNHYIDIAVHSS--NRV 144
Query: 181 VLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPAT 223
+KVKIML WD K GP LPDLV+I K+E+ PAT
Sbjct: 145 CWELKVKIMLLWDPNSKIGPKNSLPDLVSIVKPKDEIL--PAT 185
>gi|95116517|gb|ABF56171.1| 40S ribosomal protein S3 [Theobroma cacao]
Length = 86
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/86 (97%), Positives = 85/86 (98%)
Query: 58 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 1 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 60
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKLR 143
ACYGVLRFIMESGAKGCEV+VSG LR
Sbjct: 61 ACYGVLRFIMESGAKGCEVMVSGXLR 86
>gi|310771967|emb|CBH28921.1| 40S ribosomal protein S3 [Anncaliia algerae]
Length = 216
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 129/199 (64%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
+ G+ AEL+E + EL E+GY G+++++ + +I IR + ++V+G+K R+ +
Sbjct: 12 IQKGLMHAELDEFFSIELKEEGYGGMDIKLHEMPVQITIRVNKPEDVMGDKKSRLNLIKH 71
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
++ +RF + VE+ E + N+GLC + QA+ +R KL G+ RRA + ++ I + GA
Sbjct: 72 LLMQRFPLLSSGVEINVEMIKNKGLCPMTQADFIRVKLFSGIPFRRAVHAAMKSIKDGGA 131
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLE 191
+GC +I+SGKL+ QRAKS+K++ G MI +G ++ A+ VLL+QGV+GIKVKIML
Sbjct: 132 QGCVIIISGKLKGQRAKSVKYQQGLMIHTGNDRKLFVKEAISTVLLKQGVIGIKVKIMLP 191
Query: 192 WDQKGKQGPTTPLPDLVTI 210
+D G GP+ + D +TI
Sbjct: 192 YDPTGINGPSREICDKITI 210
>gi|402466373|gb|EJW01879.1| ribosomal protein S3 [Edhazardia aedis USNM 41457]
Length = 227
Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 129/214 (60%), Gaps = 2/214 (0%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATR-TQNVLGEKGR 64
S +F+ +G+ +AELNE T+E DGY+G E+ + I ++ ++ T V+G
Sbjct: 11 STVNRFIKNGLIYAELNEYFTKEFYADGYAGCEIFHNSIPMRIYLKVSKPTAEVIGTNKC 70
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+++ S++ KR +N V++ E + +GLC QA ++ +LL +VRRA Y +R
Sbjct: 71 RIKQVRSLIAKRLGMADNDVDILVEMIKKKGLCPFTQAVNIAQRLLVNASVRRAVYSSIR 130
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
E GA+G EVIVSGK + QRA+S KF DG MI SGQP +Y+ + V +RQGV+GI
Sbjct: 131 AAKEEGAQGIEVIVSGKTKGQRARSTKFIDGLMIHSGQPAKDYVKTGFTAVEMRQGVIGI 190
Query: 185 KVKIMLEWDQKGKQGPTTPLPD-LVTIHPLKEEV 217
KVKIML +D +G GP + D ++ P EV
Sbjct: 191 KVKIMLPYDPEGIIGPNKVMADKVIVFEPKDSEV 224
>gi|4680363|gb|AAD27643.1|AF133129_1 ribosomal protein S3 [Meriones unguiculatus]
Length = 128
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/111 (74%), Positives = 89/111 (80%), Gaps = 2/111 (1%)
Query: 116 RRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV 175
RRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHV
Sbjct: 1 RRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 60
Query: 176 LLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
LLRQGVLGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 61 LLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 109
>gi|149068843|gb|EDM18395.1| rCG40478, isoform CRA_e [Rattus norvegicus]
Length = 129
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/97 (87%), Positives = 87/97 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLC 97
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGL
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLW 97
>gi|148684440|gb|EDL16387.1| ribosomal protein S3, isoform CRA_b [Mus musculus]
Length = 129
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 95/121 (78%), Gaps = 1/121 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGL ++ +G A R C
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLWPAMVCFGSLWR-VGPRAARLWCL 119
Query: 121 G 121
G
Sbjct: 120 G 120
>gi|347527|gb|AAA18095.1| ribosomal protein S3, partial [Homo sapiens]
Length = 95
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/95 (88%), Positives = 86/95 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRG 95
EKGRRIRELT+VVQKRF FPE SVELYAEKV RG
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>gi|315139154|gb|ADT80771.1| ribosomal protein S3 [Heliothis subflexa]
gi|315139156|gb|ADT80772.1| ribosomal protein S3 [Heliothis virescens]
Length = 126
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/108 (69%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Query: 117 RACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVL 176
RACYGVLRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+++A RHVL
Sbjct: 1 RACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVL 60
Query: 177 LRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
LRQGVLGIKVKIML WDQ+GK GP P PD + + P E V + P +
Sbjct: 61 LRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTS 108
>gi|308802700|ref|XP_003078663.1| putative ribosomal protein (ISS) [Ostreococcus tauri]
gi|116057116|emb|CAL51543.1| putative ribosomal protein (ISS) [Ostreococcus tauri]
Length = 145
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/102 (71%), Positives = 85/102 (83%)
Query: 115 VRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRH 174
VR ACYGVLR+IMESGAKG EV+VSGKLR QRAK+MKFKDGYMISSG PV +YI S RH
Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89
Query: 175 VLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
LLRQG +G++VKIML+ D KG+ GP+TP+PD V IH KE+
Sbjct: 90 ALLRQGTIGMRVKIMLDHDPKGRDGPSTPIPDTVVIHTPKED 131
>gi|387594476|gb|EIJ89500.1| hypothetical protein NEQG_00270 [Nematocida parisii ERTm3]
gi|387596684|gb|EIJ94305.1| hypothetical protein NEPG_00972 [Nematocida parisii ERTm1]
Length = 244
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 123/205 (60%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
V G+ + ELNE+ ++ + DGY+G++ + EI ++ + +L + RI++L
Sbjct: 20 IVNQGLIYTELNEMFSKFMENDGYAGMDYKPYTSPIEITLKLGKPSGMLEDNKLRIKQLI 79
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
S++Q RF+ E SV ++ E+V NR L A QA+ ++ KL GL VRR G +R IME G
Sbjct: 80 SLIQMRFRLEEGSVSIFIEQVKNRALNAQIQADLIKEKLGAGLPVRRVVSGAIRTIMEGG 139
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
A G EVI+SGKL+ QRA+S K +G + SG +Y+ + +LL+QG+LGIKV I L
Sbjct: 140 ASGAEVIISGKLKGQRARSYKVSEGILKHSGNSTKDYVKKGMSSILLKQGILGIKVGITL 199
Query: 191 EWDQKGKQGPTTPLPDLVTIHPLKE 215
++D GK G P VTI +E
Sbjct: 200 KYDPTGKVGTPVQHPSNVTIFSQEE 224
>gi|426375157|ref|XP_004054412.1| PREDICTED: 40S ribosomal protein S3-like [Gorilla gorilla
gorilla]
Length = 110
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/92 (86%), Positives = 82/92 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAE G SGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEHGCSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVN 92
EKGRRIRELT+VVQKRF FPE SVELYAEK N
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKCN 92
>gi|300708361|ref|XP_002996361.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01]
gi|239605657|gb|EEQ82690.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01]
Length = 214
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 128/207 (61%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+KF+ADG+ FAEL E+ + L +G+S +E+R+ ++I++ + Q ++G+K +I +
Sbjct: 8 KKFIADGMIFAELKELFEKCLINEGFSSLELRLEESPVKVILKVVKPQELIGDKKWKIVQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ +V R P+++V + +KV +GLC + QA +R K+L + +RA VL+
Sbjct: 68 IQHLVASRLSLPDSNVVVIIDKVVEKGLCPVYQANLIREKMLANIPHKRAANLVLKNTKF 127
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+GA GC V +SGKL+ RA + KF +G +I SGQP +Y+ + V +QGV+GI+V I
Sbjct: 128 AGATGCLVTISGKLKGLRACTKKFLEGVVIKSGQPSRDYVKKHITTVNTKQGVIGIQVSI 187
Query: 189 MLEWDQKGKQGPTTPLPDLVTIHPLKE 215
ML D +G GP+T LPD + + KE
Sbjct: 188 MLPHDPEGILGPSTLLPDKIVVLDAKE 214
>gi|323303371|gb|EGA57167.1| Rps3p [Saccharomyces cerevisiae FostersB]
Length = 136
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/119 (64%), Positives = 97/119 (81%), Gaps = 3/119 (2%)
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPV 164
+++KLL GLA+RRA YGV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPV
Sbjct: 1 MKFKLLNGLAIRRAAYGVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPV 60
Query: 165 NEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPA 222
N++ID+A RHVL+RQGVLGIKVKIM + K + G LPD VT I P +EE +AP+
Sbjct: 61 NDFIDTATRHVLMRQGVLGIKVKIMRD-PAKSRTG-XKALPDAVTIIEPKEEEPILAPS 117
>gi|440493994|gb|ELQ76410.1| 40S ribosomal protein S3 [Trachipleistophora hominis]
Length = 214
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 124/203 (61%), Gaps = 3/203 (1%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
+A G+ +AELNE +EL E GYS ++ V +IIIR +T +++ E R++++TS
Sbjct: 14 IATGIAYAELNEFFGKELMESGYSSMKFLAHEVPLKIIIRVLKTDDLINENRYRLKQITS 73
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
+V+KR K V + E V ++GLC QAE +R K+ GLA RRA G LR I E+GA
Sbjct: 74 LVKKRLK---KDVTILVEMVKDKGLCPNVQAEYIRKKMSEGLAYRRAVNGALRTIKEAGA 130
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLE 191
+GC ++VSGKL+ QRA+S K I SG P EY+ V L+QGV+GI VKIML
Sbjct: 131 QGCIIVVSGKLKGQRARSQKMMWQTNIYSGSPKEEYMRGGKSTVHLKQGVIGIIVKIMLP 190
Query: 192 WDQKGKQGPTTPLPDLVTIHPLK 214
D +G +GP + D + + +K
Sbjct: 191 HDPEGIRGPRREMVDKIRVLDVK 213
>gi|378756656|gb|EHY66680.1| hypothetical protein NERG_00320 [Nematocida sp. 1 ERTm2]
Length = 243
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 126/221 (57%), Gaps = 5/221 (2%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
V+ G+ + ELNE+ ++ + D Y+G++ + EI ++ + +L RI++L
Sbjct: 20 IVSQGMVYTELNEMFSKFMINDEYAGMDYKPYSSPIEITLKLGKPAGMLENNKLRIKQLI 79
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+++Q RF+ E SV ++ E+V N+ L A QA +R K+ L VRRA G +R IME G
Sbjct: 80 TLIQMRFRLEEGSVSIFIEQVKNKALNAQIQANQIREKIGASLPVRRAVSGAIRTIMEGG 139
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
A G EVI+SGKL+ QRA+S K G M SG + +Y+ + +LL+QG+LGIKV I L
Sbjct: 140 AAGVEVIISGKLKGQRARSYKVVGGIMKHSGDSIKDYVKKGMSSILLKQGILGIKVAITL 199
Query: 191 EWDQKGKQGPTTPLPDLVTIHPLKE-----EVYVAPATATS 226
+ D GK G P VTI +E +V PA A S
Sbjct: 200 KHDPTGKIGTAVQHPSSVTIFSQEELAQKKKVKAYPAKAYS 240
>gi|429965063|gb|ELA47060.1| ribosomal protein S3 [Vavraia culicis 'floridensis']
Length = 214
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 122/204 (59%), Gaps = 3/204 (1%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
+A G+ +AELNE +EL E GYS ++ V +IIIR + +++ E R++++TS
Sbjct: 14 IATGIAYAELNEFFAKELMESGYSSMKFLAHEVPLKIIIRVLKADDLINENRYRLKQITS 73
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
+V+KR V + E V ++GLC QAE +R K+ GL RRA G LR I E+GA
Sbjct: 74 LVKKRL---NKDVTILVEMVKDKGLCPNVQAEYIRKKMSEGLTYRRAVNGALRTIKEAGA 130
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLE 191
+GC +IVSGKL+ QRA+S K I SG P EY+ V L+QGV+GI VKIML
Sbjct: 131 QGCIIIVSGKLKGQRARSQKMMWQTNIYSGSPKEEYMREGKSTVHLKQGVIGIIVKIMLP 190
Query: 192 WDQKGKQGPTTPLPDLVTIHPLKE 215
D +G +GP + D + + +KE
Sbjct: 191 HDPEGIRGPRREMVDKIRVLDVKE 214
>gi|410812263|gb|AFV81473.1| 40S ribosomal protein S3, partial [Scrobicularia plana]
Length = 113
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 77/89 (86%)
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P+N+Y+D+AVRHVLLRQGV
Sbjct: 1 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQGV 60
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
LGIKVKIML WD GK GP PLPD V+I
Sbjct: 61 LGIKVKIMLPWDPSGKIGPKKPLPDHVSI 89
>gi|149068851|gb|EDM18403.1| rCG40478, isoform CRA_m [Rattus norvegicus]
Length = 98
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/85 (89%), Positives = 78/85 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVE 85
EKGRRIRELT+VVQKRF FPE SVE
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVE 85
>gi|170055465|ref|XP_001863594.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167875417|gb|EDS38800.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 278
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 108/198 (54%), Gaps = 48/198 (24%)
Query: 30 AEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAE 89
A D + VEV VT +RTEIII TRTQ VLGEKG IRELT++VQK +
Sbjct: 73 AADDFLSVEVHVTSIRTEIIIMTTRTQKVLGEKGHHIRELTAIVQKLIR----------- 121
Query: 90 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKS 149
+RRAC +ESGAKG EV+VSGKLR QRAKS
Sbjct: 122 ------------------------DLRRAC-------LESGAKGSEVVVSGKLRGQRAKS 150
Query: 150 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLP-DLV 208
MKF DG +I S P NEY D+A RH+LLRQG KIML WD GK P PLP +++
Sbjct: 151 MKFVDGMVIHSRDPCNEYSDTATRHILLRQG-----GKIMLPWDPNGKIDPKEPLPENVL 205
Query: 209 TIHPLKEEVYVAPATATS 226
+ P E ++ P T +
Sbjct: 206 VVEPKDEIMHNTPGTKNN 223
>gi|83595153|gb|ABC25034.1| ribosomal protein S3 [Hydra vulgaris]
Length = 119
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/98 (73%), Positives = 79/98 (80%)
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 185
I+ESGAKGCEVIVSGKLR QRAKSMKF DG+MI SG P+ EYID+AVRHV LRQGVLGIK
Sbjct: 6 ILESGAKGCEVIVSGKLRGQRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQGVLGIK 65
Query: 186 VKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPAT 223
VKIML WD GK GP PLPD V+I KEEV+ P +
Sbjct: 66 VKIMLPWDPTGKTGPKKPLPDHVSIVEPKEEVFYPPTS 103
>gi|444729886|gb|ELW70289.1| 40S ribosomal protein S3-A [Tupaia chinensis]
Length = 174
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 84/100 (84%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
+K RKFV G+F AELNE LT+ELA+DGYSGVE RVTP RTEIII ATRTQNVLGEKG++
Sbjct: 75 AKNRKFVTYGIFKAELNEFLTQELAKDGYSGVEGRVTPTRTEIIILATRTQNVLGEKGQQ 134
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 105
RELT+V+QKRF FPE SVELYAEKV R L AI QAESL
Sbjct: 135 TRELTAVIQKRFGFPEGSVELYAEKVATRSLFAIVQAESL 174
>gi|238613775|ref|XP_002398529.1| hypothetical protein MPER_00865 [Moniliophthora perniciosa FA553]
gi|215475235|gb|EEB99459.1| hypothetical protein MPER_00865 [Moniliophthora perniciosa FA553]
Length = 100
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/85 (87%), Positives = 78/85 (91%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
IIIRAT TQ VLGEKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRY
Sbjct: 1 IIIRATHTQEVLGEKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRY 60
Query: 108 KLLGGLAVRRACYGVLRFIMESGAK 132
KLL GLAVRRACYGVLRF+MESGAK
Sbjct: 61 KLLNGLAVRRACYGVLRFVMESGAK 85
>gi|149641402|ref|XP_001506205.1| PREDICTED: 40S ribosomal protein S3-A-like, partial
[Ornithorhynchus anatinus]
Length = 85
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/85 (88%), Positives = 77/85 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVPISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVE 85
EKGRRIRELT+VVQKRF FPE SVE
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVE 85
>gi|237861296|gb|ACR24221.1| 40S ribosomal protein S3 [Nosema bombycis]
gi|326562626|gb|ADZ95643.1| 40S ribosomal protein S3 [Nosema bombycis]
Length = 214
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 122/207 (58%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K +A+G+ +AE+ E + L +G+S V++R +I+++ + + GEK ++++
Sbjct: 8 KKVIANGILYAEIKEFCEKALIPEGFSSVDIRFDENPIKIVLKVVKPHELTGEKKFKLKQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
L + R PE ++ + +KV +GLC + QA ++ K+L G+ +RA VLR
Sbjct: 68 LQHLFASRLNVPEMNINIIIDKVVEKGLCPVFQANLIKEKMLAGVQYKRAANLVLRNTKF 127
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+GA GC + +SGKL+ RA + KF +G +I SGQP +Y+ V +QGV+G++V I
Sbjct: 128 AGATGCLITISGKLKGLRACTKKFLEGVVIKSGQPSKDYVKKYTTTVNTKQGVIGVQVSI 187
Query: 189 MLEWDQKGKQGPTTPLPDLVTIHPLKE 215
ML D +G GP+T LPD + + KE
Sbjct: 188 MLPHDPEGIIGPSTLLPDKIVVLDAKE 214
>gi|354477339|ref|XP_003500878.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 152
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/105 (68%), Positives = 81/105 (77%), Gaps = 2/105 (1%)
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
VLRF MESGA+GCEV+VSGKLR +RAKSMK DG MI SG PVN Y+D+A+RHVLLRQGV
Sbjct: 31 VLRFTMESGAEGCEVVVSGKLRGERAKSMKLVDGLMIHSGDPVNYYVDTAIRHVLLRQGV 90
Query: 182 LGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
LGIKVKIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 91 LGIKVKIMLPWDPSGKIGPKKPLPDHVSIMEPKDEIL--PTTPIS 133
>gi|149068842|gb|EDM18394.1| rCG40478, isoform CRA_d [Rattus norvegicus]
Length = 151
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 78/100 (78%), Gaps = 2/100 (2%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 187 KIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
KIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 61 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 98
>gi|149068840|gb|EDM18392.1| rCG40478, isoform CRA_b [Rattus norvegicus]
gi|344246127|gb|EGW02231.1| 40S ribosomal protein S3 [Cricetulus griseus]
Length = 117
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 78/100 (78%), Gaps = 2/100 (2%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 187 KIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
KIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 61 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 98
>gi|386869506|ref|NP_001247436.1| 40S ribosomal protein S3 isoform 3 [Homo sapiens]
gi|426369805|ref|XP_004051874.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Gorilla gorilla
gorilla]
gi|426369807|ref|XP_004051875.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Gorilla gorilla
gorilla]
gi|426369811|ref|XP_004051877.1| PREDICTED: 40S ribosomal protein S3 isoform 4 [Gorilla gorilla
gorilla]
gi|426369815|ref|XP_004051879.1| PREDICTED: 40S ribosomal protein S3 isoform 6 [Gorilla gorilla
gorilla]
gi|21104402|dbj|BAB93471.1| IMR-90 ribosomal protein S3 [Homo sapiens]
Length = 117
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 78/100 (78%), Gaps = 2/100 (2%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 187 KIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
KIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL--PTTPIS 98
>gi|405948172|gb|EKC17931.1| 40S ribosomal protein S3, partial [Crassostrea gigas]
Length = 112
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 80/110 (72%), Gaps = 5/110 (4%)
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P+N+Y+D+AVRHVLLRQGVLGIKVK
Sbjct: 1 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQGVLGIKVK 60
Query: 188 IMLEWDQKGKQGPTTPLPDLVT-IHPLKEEVYVAPAT----ATSIELPVA 232
IML WD GK GP PLPD V+ + P E V P + A E P A
Sbjct: 61 IMLPWDPSGKIGPKRPLPDHVSVVEPKDEAVPAHPYSEQKGAKPTEPPAA 110
>gi|8247324|emb|CAB92940.1| putative 40S ribosomal protein S3 [Plasmodium falciparum 3D7]
Length = 110
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 81/99 (81%)
Query: 112 GLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSA 171
GLAVRRACYGVLR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY+IS+G+P ++++A
Sbjct: 2 GLAVRRACYGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTA 61
Query: 172 VRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTI 210
R L+QGVLGIKVKIML + G T+ LPD +++
Sbjct: 62 TRSAQLKQGVLGIKVKIMLPTAIDTRTGLTSILPDNISV 100
>gi|253746539|gb|EET01746.1| Ribosomal protein S3 [Giardia intestinalis ATCC 50581]
Length = 217
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 120/204 (58%), Gaps = 6/204 (2%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
K++ D + AEL+E +REL + GY+ + T +II+ + V+G+ R+ ++
Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTADSICVIIQCAEPEIVMGDNHYRLHKI 75
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
++ RF + ++ +K+ RGL A ++LR KL + +RRA Y V+R M +
Sbjct: 76 EYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSVIRTAMRA 135
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
GA GCEVIV+GKLRAQRA++ KFK+G +IS+G P ++ A RH+ +RQGV+G+KV+I
Sbjct: 136 GAAGCEVIVAGKLRAQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQGVIGVKVRIY 195
Query: 190 LEWDQKGKQGPTTPLPDLVTIHPL 213
+G +PD + I P
Sbjct: 196 ----NPNIRGAV--MPDKIEIGPF 213
>gi|324105279|gb|ADY18402.1| ribosomal protein rps3 [Glycera tridactyla]
Length = 108
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/97 (69%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P ++Y+D+AVRHVLLRQGVLGIKVK
Sbjct: 1 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTHDYVDTAVRHVLLRQGVLGIKVK 60
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
IML WD GK GP PLPD ++I P +EE+ P +
Sbjct: 61 IMLPWDPSGKIGPKHPLPDQISIVEPKEEEIPSQPKS 97
>gi|28189751|dbj|BAC56490.1| similar to ribosomal protein S3 [Bos taurus]
Length = 77
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/77 (90%), Positives = 72/77 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRF 77
EKGRRIRELT+VVQKRF
Sbjct: 61 EKGRRIRELTAVVQKRF 77
>gi|159117007|ref|XP_001708724.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803]
gi|157436837|gb|EDO81050.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803]
gi|308158393|gb|EFO61089.1| Ribosomal protein S3 [Giardia lamblia P15]
Length = 217
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 112/179 (62%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
K++ D + AEL+E +REL + GY+ + T +II+ + V+G+ R+ ++
Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLHKI 75
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
++ RF + ++ +K+ RGL A ++LR KL + +RRA Y ++R M +
Sbjct: 76 EYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRA 135
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GA GCEVIV+GKLRAQRA++ KFK+G +IS+G P ++ A RH+ +RQGV+G+KV+I
Sbjct: 136 GAAGCEVIVAGKLRAQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQGVIGVKVRI 194
>gi|159163349|pdb|1WH9|A Chain A, Solution Structure Of The Kh Domain Of Human Ribosomal
Protein S3
Length = 92
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/79 (88%), Positives = 71/79 (89%)
Query: 17 FFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKR 76
F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKR
Sbjct: 8 FKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKR 67
Query: 77 FKFPENSVELYAEKVNNRG 95
F FPE SVELYAEKV RG
Sbjct: 68 FGFPEGSVELYAEKVATRG 86
>gi|149068841|gb|EDM18393.1| rCG40478, isoform CRA_c [Rattus norvegicus]
Length = 105
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/76 (90%), Positives = 71/76 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKR 76
EKGRRIRELT+VVQKR
Sbjct: 61 EKGRRIRELTAVVQKR 76
>gi|149391843|gb|ABR25845.1| 40S ribosomal protein S3-a [Oryza sativa Indica Group]
Length = 85
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 73/87 (83%), Gaps = 4/87 (4%)
Query: 147 AKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPD 206
AKSMKFKDGYMISSG PVN YIDSAVRHVLLRQGVLGIKVKIML+WD KGKQGP TPLPD
Sbjct: 1 AKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPD 60
Query: 207 LVTIH-PLKEEVYVAPATATSIELPVA 232
LVTIH P E+ + P TA E+PVA
Sbjct: 61 LVTIHAPKDEDEFSKPLTA---EIPVA 84
>gi|148684441|gb|EDL16388.1| ribosomal protein S3, isoform CRA_c [Mus musculus]
Length = 97
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/98 (73%), Positives = 77/98 (78%), Gaps = 6/98 (6%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCA 98
EKGRRIRELT+VVQ P ++ +NR L A
Sbjct: 61 EKGRRIRELTAVVQNHQPCPSQCLQ------HNRVLAA 92
>gi|158187818|gb|ABW23198.1| ribosomal protein rps3 [Eurythoe complanata]
Length = 105
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 73/94 (77%), Gaps = 2/94 (2%)
Query: 133 GCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEW 192
GCEV+VSGKLR QRAKSMKF DG MI SG+P N+Y+D+AVRHVLLRQGVLGIKVKIML W
Sbjct: 1 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVDTAVRHVLLRQGVLGIKVKIMLPW 60
Query: 193 DQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
D GK GP PLPD V+I K+E PA TS
Sbjct: 61 DPAGKIGPKRPLPDHVSIVEPKDE--TPPAQPTS 92
>gi|440907841|gb|ELR57934.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 158
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 83/121 (68%), Gaps = 9/121 (7%)
Query: 109 LLGGLAV---RRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVN 165
+GGL V AC G R ++ K CEV+VSGKL+ QRAKSMKF DG MI SG PVN
Sbjct: 25 FVGGLTVLGPALACCGSSRRVI----KDCEVVVSGKLQGQRAKSMKFVDGLMIHSGDPVN 80
Query: 166 EYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATAT 225
Y+D+AVRHVLLRQGVLGIKVKIML WD GK GP PLPD V+I K+E+ P T
Sbjct: 81 YYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEIL--PTTPI 138
Query: 226 S 226
S
Sbjct: 139 S 139
>gi|242222173|ref|XP_002476815.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
gi|220723885|gb|EED77980.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
Length = 136
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 76/98 (77%), Gaps = 1/98 (1%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEV+VSGKLRA RAKSMKF DG+MI SGQP +++D AVRHV+LRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQGVLGIKV 60
Query: 187 KIMLEWDQKGKQGPTTPLPDLVTI-HPLKEEVYVAPAT 223
KIM WD +G+ GP PLPD V I P +++ P +
Sbjct: 61 KIMKGWDPEGQVGPRKPLPDSVQILEPPLDKIVAEPTS 98
>gi|32400841|gb|AAP80652.1|AF479033_1 40S ribosomal protein [Triticum aestivum]
Length = 79
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/78 (79%), Positives = 67/78 (85%)
Query: 150 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVT 209
+KFKDGYMISSGQPVNEYID+AVRHVLLRQGVLGIKVKIML+WD KGK GPTTPLPDLVT
Sbjct: 2 VKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVT 61
Query: 210 IHPLKEEVYVAPATATSI 227
IHP KEE + P +
Sbjct: 62 IHPPKEEDELRPPALVEV 79
>gi|119598703|gb|EAW78297.1| hCG2022018 [Homo sapiens]
Length = 117
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGC+V+ SGKLR QRAKSMKF DG I SG P+N Y+ +AV HVLLRQGVLGIKV
Sbjct: 1 MESGAKGCKVMASGKLRGQRAKSMKFVDGLTIHSGDPINYYVGTAVCHVLLRQGVLGIKV 60
Query: 187 KIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
KIML WD GK GP PLPD V+I K+E+ P T S
Sbjct: 61 KIMLPWDPTGKTGPKKPLPDHVSIVEPKDEIL--PTTPIS 98
>gi|226476716|emb|CAX72250.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 102
Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/91 (69%), Positives = 72/91 (79%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGA+G EVIVSGK++ QRAK+MKF DG MI SG PVN Y+D AVRHV L QG+LGIKV
Sbjct: 1 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKV 60
Query: 187 KIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
KIM++ D GK+GP PLPD VTI KEEV
Sbjct: 61 KIMMDHDSSGKKGPRKPLPDTVTILAAKEEV 91
>gi|429961737|gb|ELA41282.1| hypothetical protein VICG_01655 [Vittaforma corneae ATCC 50505]
Length = 215
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 113/202 (55%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
RK++ +G+ AELNE+ + Y+G ++ +I I+ Q +GE ++ +
Sbjct: 7 RKYIQNGLIDAELNELFGKYFQAQIYAGSTIKHNQTPIKISIKVYNPQEAIGENKFKLLQ 66
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
L +++ +RF P N++++ EK+ +RGL AE LR L +R +++
Sbjct: 67 LQNMIGQRFDIPPNNIDIVFEKIADRGLEPAYHAEQLRLAFLQNKPYKRVINSIIKSSRA 126
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+GA+G + V+GKL+ QRAK++K+ DGY I SG +Y+ SA +QG +G++V +
Sbjct: 127 AGAQGVMIRVAGKLKGQRAKAIKYFDGYFIQSGMAAKDYVRSAKSQAKCKQGTIGVQVSV 186
Query: 189 MLEWDQKGKQGPTTPLPDLVTI 210
ML +D +G G T + D +TI
Sbjct: 187 MLPYDPEGVVGSNTIISDRITI 208
>gi|240104054|ref|YP_002960363.1| 30S ribosomal protein S3P [Thermococcus gammatolerans EJ3]
gi|259495259|sp|C5A280.1|RS3_THEGJ RecName: Full=30S ribosomal protein S3
gi|239911608|gb|ACS34499.1| SSU ribosomal protein S3P (rps3P) [Thermococcus gammatolerans EJ3]
Length = 209
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 112/199 (56%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLEWDQKGKQGPTTPLPD 206
IM P LPD
Sbjct: 182 IM---------PPDARLPD 191
>gi|223477921|ref|YP_002582383.1| 30S ribosomal protein S3e (S3p) [Thermococcus sp. AM4]
gi|214033147|gb|EEB73975.1| SSU ribosomal protein S3e (S3p) [Thermococcus sp. AM4]
Length = 209
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 112/199 (56%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLEWDQKGKQGPTTPLPD 206
IM P LPD
Sbjct: 182 IM---------PPEARLPD 191
>gi|170060068|ref|XP_001865639.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167878646|gb|EDS42029.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 179
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 96/206 (46%), Gaps = 54/206 (26%)
Query: 17 FFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKR 76
FF + LAEDG SGVEVRVTP RTE II A+ + RIREL +V+
Sbjct: 20 FFLRSGSSFSAWLAEDGLSGVEVRVTPTRTEFIIMASAPRTCSARSDHRIRELNAVI--- 76
Query: 77 FKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV 136
YGVLRFIMES AKG EV
Sbjct: 77 -------------------------------------------YGVLRFIMESCAKGYEV 93
Query: 137 IVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKG 196
+VSGKLR QRAKSM F DG MI S P E LRQG LGI+VKI+L WD G
Sbjct: 94 VVSGKLRGQRAKSMTFVDGMMIHSDDPCKEATP-------LRQGELGIQVKIVLPWDPNG 146
Query: 197 KQGPTTPLPDLV-TIHPLKEEVYVAP 221
GP L D V + P E +Y P
Sbjct: 147 NIGPKELLSDNVEMVEPKDEIMYNTP 172
>gi|195650699|gb|ACG44817.1| hypothetical protein [Zea mays]
gi|413917295|gb|AFW57227.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 80
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/67 (89%), Positives = 62/67 (92%)
Query: 150 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVT 209
MKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML+WD KGK GP TPLPDLVT
Sbjct: 1 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPITPLPDLVT 60
Query: 210 IHPLKEE 216
IH K+E
Sbjct: 61 IHTPKDE 67
>gi|22759729|dbj|BAC10913.1| putative ribosomal protein S3 [Zinnia elegans]
Length = 143
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/68 (86%), Positives = 61/68 (89%)
Query: 144 AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTP 203
AQRAKSMKFKDGYM+SSGQPV EYIDSAVRHVLLRQGVLGIKVKIML+WD GK GP TP
Sbjct: 1 AQRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPTGKLGPKTP 60
Query: 204 LPDLVTIH 211
LPD V IH
Sbjct: 61 LPDNVVIH 68
>gi|296083751|emb|CBI23740.3| unnamed protein product [Vitis vinifera]
Length = 458
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 73/87 (83%)
Query: 39 VRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCA 98
+++ EIII AT+TQNVLG+KGR+IRELTSVVQKRF+F EN+VELYAEK NNR A
Sbjct: 322 LQLRDFHMEIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLENNVELYAEKFNNRVFYA 381
Query: 99 IAQAESLRYKLLGGLAVRRACYGVLRF 125
IAQAESLR+KLLGGL VRRA YGVL F
Sbjct: 382 IAQAESLRFKLLGGLVVRRAGYGVLSF 408
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 82/145 (56%), Gaps = 48/145 (33%)
Query: 46 TEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 105
TEIII AT+TQNVL +KG++IRELTSVVQKR
Sbjct: 110 TEIIIHATQTQNVLCKKGKKIRELTSVVQKR----------------------------- 140
Query: 106 RYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVN 165
F+MESG KGCEVI+SGKL Q AKS+KFKDGY+I SGQ V
Sbjct: 141 -------------------FVMESGTKGCEVIMSGKLCVQCAKSIKFKDGYLIFSGQLVK 181
Query: 166 EYIDSAVRHVLLRQGVLGIKVKIML 190
+YIDS VRHVLL+QG+L IK L
Sbjct: 182 DYIDSTVRHVLLKQGILSIKFVFYL 206
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 20/23 (86%)
Query: 189 MLEWDQKGKQGPTTPLPDLVTIH 211
+L +D KGKQGPTTPLP+LVTI
Sbjct: 405 VLSFDPKGKQGPTTPLPNLVTIQ 427
>gi|14591528|ref|NP_143610.1| 30S ribosomal protein S3 [Pyrococcus horikoshii OT3]
gi|6647791|sp|O59424.1|RS3_PYRHO RecName: Full=30S ribosomal protein S3
gi|3258205|dbj|BAA30888.1| 210aa long hypothetical 30S ribosomal protein S3 [Pyrococcus
horikoshii OT3]
Length = 210
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 118/212 (55%), Gaps = 13/212 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +++ +++ N L A QA + L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIDV--QEIKNPYLNAKVQAVRIAQALERGIHFRRAAYSAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 217
IM P LPD + I P +EEV
Sbjct: 182 IM---------PPDARLPDEIEIVEKPAEEEV 204
>gi|409096178|ref|ZP_11216202.1| 30S ribosomal protein S3P [Thermococcus zilligii AN1]
Length = 209
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 116/209 (55%), Gaps = 11/209 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GR+IR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAADPGYVIGRGGRKIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V++++F +E+ E++ N L A QA L L G+ RRA Y + IM
Sbjct: 64 DLTRVLERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIGAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + +L+ GV+G+KV
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQAVLKLGVIGVKVS 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
IM P LPD + I + EE
Sbjct: 182 IMP---------PDAKLPDEIGIKEIVEE 201
>gi|312137081|ref|YP_004004418.1| 30S ribosomal protein S3 [Methanothermus fervidus DSM 2088]
gi|311224800|gb|ADP77656.1| SSU ribosomal protein S3P [Methanothermus fervidus DSM 2088]
Length = 217
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 115/203 (56%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+++F+A+ + AE++E L +EL GY G+++++TP+ T I I A R V+G GR +R
Sbjct: 3 EKEFIAESLKRAEIDEFLEKELERAGYGGMDIQLTPLGTMITIYAERPGLVIGRGGRTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
LT++++KRF +E+ +V L A + L G+ RR YG LR IM
Sbjct: 63 RLTNILRKRFGLDNPQIEVKEVEVPE--LNPKIMAHRIASMLERGMHFRRVAYGTLRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGK+R RA S+KF +G++ G+P +++ + L+ GVLG+ VK
Sbjct: 121 AAGAQGAEITISGKIRGARATSVKFTEGHIKKCGEPAEKFVKTGFATAQLKPGVLGVHVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IMP---------PGVKLPDEIKI 194
>gi|57641471|ref|YP_183949.1| 30S ribosomal protein S3 [Thermococcus kodakarensis KOD1]
gi|73918002|sp|Q5JDH5.1|RS3_PYRKO RecName: Full=30S ribosomal protein S3
gi|57159795|dbj|BAD85725.1| SSU ribosomal protein S3P [Thermococcus kodakarensis KOD1]
Length = 209
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 110/199 (55%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++ I A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVTIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++K+F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILEKQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + L+ GV+G+KV
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSRGYAQAQLKLGVIGVKVS 181
Query: 188 IMLEWDQKGKQGPTTPLPD 206
IM P LPD
Sbjct: 182 IM---------PPDAKLPD 191
>gi|390960788|ref|YP_006424622.1| 30S ribosomal protein S3 [Thermococcus sp. CL1]
gi|390519096|gb|AFL94828.1| 30S ribosomal protein S3P [Thermococcus sp. CL1]
Length = 210
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 112/203 (55%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++ I A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVTIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAYSAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + L+ GV+G+KV
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQAKLKLGVIGVKVS 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD + +
Sbjct: 182 IM---------PPDAKLPDEIEV 195
>gi|341582057|ref|YP_004762549.1| 30S ribosomal protein S3P [Thermococcus sp. 4557]
gi|340809715|gb|AEK72872.1| 30S ribosomal protein S3P [Thermococcus sp. 4557]
Length = 210
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 114/210 (54%), Gaps = 12/210 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++ I A V+G GRRIR
Sbjct: 4 ERYFIKENVRDMLIDEYLEKELRRAGYGGIDIKKTPLGTKVTIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERKFNLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAYSAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + L+ GV+G+KV
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQARLKLGVIGVKVS 181
Query: 188 IMLEWDQKGKQGPTTPLPDLV-TIHPLKEE 216
IM P LPD + I L EE
Sbjct: 182 IM---------PPDAKLPDEIEVIEKLVEE 202
>gi|170052166|ref|XP_001862098.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167873123|gb|EDS36506.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 181
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 88/169 (52%), Gaps = 44/169 (26%)
Query: 54 RTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL 113
RTQNVLGE RIREL ++ L+AEKV R LCAI QAESL YKL+GGL
Sbjct: 27 RTQNVLGESDHRIRELNAI-------------LFAEKVATRSLCAIVQAESLCYKLIGGL 73
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVR 173
AV RACYG F DG + S P NE+ D+A R
Sbjct: 74 AVCRACYG------------------------------FVDGIIFHSDDPSNEFSDTASR 103
Query: 174 HVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLV-TIHPLKEEVYVAP 221
HVLLR G LG++VKIML WD+ G GP L D V + P + +Y P
Sbjct: 104 HVLLRHGELGMQVKIMLPWDKNGNIGPKEQLSDNVEMVEPKDKIMYNTP 152
>gi|148807|gb|AAA86865.1| ribosomal protein S3 [Haloarcula marismortui]
Length = 304
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 127/225 (56%), Gaps = 12/225 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATSIE 228
+VKI+ P LPD I+ + E YVA S+E
Sbjct: 179 RVKIIP---------PNAELPDDFEIYEDVDVEDYVADTDGESVE 214
>gi|55378378|ref|YP_136228.1| 30S ribosomal protein S3 [Haloarcula marismortui ATCC 43049]
gi|448636981|ref|ZP_21675429.1| 30S ribosomal protein S3P [Haloarcula sinaiiensis ATCC 33800]
gi|448648015|ref|ZP_21679493.1| 30S ribosomal protein S3P [Haloarcula californiae ATCC 33799]
gi|57015336|sp|P20281.2|RS3_HALMA RecName: Full=30S ribosomal protein S3; AltName: Full=HS1; AltName:
Full=HmaS3
gi|55231103|gb|AAV46522.1| 30S ribosomal protein S3P [Haloarcula marismortui ATCC 43049]
gi|445765287|gb|EMA16426.1| 30S ribosomal protein S3P [Haloarcula sinaiiensis ATCC 33800]
gi|445775885|gb|EMA26880.1| 30S ribosomal protein S3P [Haloarcula californiae ATCC 33799]
Length = 304
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 127/225 (56%), Gaps = 12/225 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATSIE 228
+VKI+ P LPD I+ + E YVA S+E
Sbjct: 179 RVKIIP---------PNAELPDDFEIYEDVDVEDYVADTDGESVE 214
>gi|448681469|ref|ZP_21691560.1| 30S ribosomal protein S3P [Haloarcula argentinensis DSM 12282]
gi|445767339|gb|EMA18442.1| 30S ribosomal protein S3P [Haloarcula argentinensis DSM 12282]
Length = 305
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 127/225 (56%), Gaps = 12/225 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATSIE 228
+VKI+ P LPD I+ + E YVA S+E
Sbjct: 179 RVKIIP---------PDAELPDDFEIYEDVDVEDYVADTDGESVE 214
>gi|448685266|ref|ZP_21693258.1| 30S ribosomal protein S3P [Haloarcula japonica DSM 6131]
gi|445781877|gb|EMA32728.1| 30S ribosomal protein S3P [Haloarcula japonica DSM 6131]
Length = 310
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 127/225 (56%), Gaps = 12/225 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATSIE 228
+VKI+ P LPD I+ + E YVA S+E
Sbjct: 179 RVKIIP---------PDAELPDDFEIYEDVDVEDYVADTDGESVE 214
>gi|448671521|ref|ZP_21687426.1| 30S ribosomal protein S3P [Haloarcula amylolytica JCM 13557]
gi|445764983|gb|EMA16123.1| 30S ribosomal protein S3P [Haloarcula amylolytica JCM 13557]
Length = 305
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 127/225 (56%), Gaps = 12/225 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATSIE 228
+VKI+ P LPD I+ + E YVA S+E
Sbjct: 179 RVKIIP---------PDAELPDDFEIYEDVDVEDYVADTDGESVE 214
>gi|448630844|ref|ZP_21673299.1| 30S ribosomal protein S3P [Haloarcula vallismortis ATCC 29715]
gi|445755218|gb|EMA06608.1| 30S ribosomal protein S3P [Haloarcula vallismortis ATCC 29715]
Length = 304
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 127/225 (56%), Gaps = 12/225 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATSIE 228
+VKI+ P LPD I+ + E YVA S+E
Sbjct: 179 RVKIIP---------PDAELPDDFEIYEDVDVEDYVADTDGESVE 214
>gi|448411351|ref|ZP_21575816.1| 30S ribosomal protein S3P [Halosimplex carlsbadense 2-9-1]
gi|445670539|gb|ELZ23138.1| 30S ribosomal protein S3P [Halosimplex carlsbadense 2-9-1]
Length = 319
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 127/225 (56%), Gaps = 12/225 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G+EV TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFADELGRAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTELEERFDLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGAKG E+++SGK+ R++ KF GY+ +G+P +D V +++ G +G+
Sbjct: 119 RIMESGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAENIVDHGVGTAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE-EVYVAPATATSIE 228
+VKI+ P LPD ++ E E YVA S+E
Sbjct: 179 QVKIIP---------PEAELPDDFEVYEDMEVEDYVADVEDESVE 214
>gi|344212407|ref|YP_004796727.1| 30S ribosomal protein S3P [Haloarcula hispanica ATCC 33960]
gi|343783762|gb|AEM57739.1| 30S ribosomal protein S3P [Haloarcula hispanica ATCC 33960]
Length = 304
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 127/225 (56%), Gaps = 12/225 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH-PLKEEVYVAPATATSIE 228
+VKI+ P LPD I+ + E YVA S+E
Sbjct: 179 RVKIIP---------PDAELPDDFEIYEDVDVEDYVADTDGESVE 214
>gi|73667656|ref|YP_303671.1| 30S ribosomal protein S3 [Methanosarcina barkeri str. Fusaro]
gi|91207819|sp|Q46GA1.1|RS3_METBF RecName: Full=30S ribosomal protein S3
gi|72394818|gb|AAZ69091.1| SSU ribosomal protein S3P [Methanosarcina barkeri str. Fusaro]
Length = 311
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 110/202 (54%), Gaps = 11/202 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV DG A ++E +L GY G+E+ TP+ T+I+I + + V+G+ G+ IR
Sbjct: 4 ERKFVNDGFVKASMDEYFAEQLNRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V R+ EN ++ A++V L A A L + G R+A + LR +M
Sbjct: 64 KLTRDVAARYNL-ENP-QIDAQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTLRAVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCEV++SGKL R++ KF DGY+ SG PV+E +D + + G LG KV+
Sbjct: 122 NAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVDEVVDEGFAVAIKKLGTLGCKVR 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVT 209
I+ P LPD T
Sbjct: 182 IIQ---------PGVVLPDSYT 194
>gi|410722176|ref|ZP_11361485.1| ribosomal protein S3, eukaryotic/archaeal type, partial
[Methanobacterium sp. Maddingley MBC34]
gi|410597412|gb|EKQ52031.1| ribosomal protein S3, eukaryotic/archaeal type, partial
[Methanobacterium sp. Maddingley MBC34]
Length = 274
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 117/224 (52%), Gaps = 11/224 (4%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLEKELDRAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ ++ VE+ ++V+ L A + L G+ RR Y LR IM
Sbjct: 63 AITQNLKNNYELENPQVEV--KEVDIPELNPKIMAHKISAMLQRGMHFRRVAYSALRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ KF DGY+ G+P +Y+ L+ GVLGI V+
Sbjct: 121 GAGAQGVEVTISGKIRGSRSACAKFTDGYIKKCGEPSIKYVKQGFATAPLKPGVLGISVR 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELPV 231
IM P LPD V I K E VA ++E PV
Sbjct: 181 IM---------PPDVVLPDKVDIIQPKVEEPVASEAVETVEAPV 215
>gi|402584605|gb|EJW78546.1| hypothetical protein WUBG_10543 [Wuchereria bancrofti]
Length = 103
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 69/82 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+GR
Sbjct: 1 MSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERGR 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
RIRELTSVVQKRF F + +VE+
Sbjct: 61 RIRELTSVVQKRFGFADGTVEV 82
>gi|257387882|ref|YP_003177655.1| 30S ribosomal protein S3 [Halomicrobium mukohataei DSM 12286]
gi|257170189|gb|ACV47948.1| ribosomal protein S3 [Halomicrobium mukohataei DSM 12286]
Length = 317
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 126/224 (56%), Gaps = 12/224 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++ F + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV--QEVDEPDLNARIVADRLGNALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GAKG E+++SGK+ R++ KF GY+ +G+P +DS V +++ G +G+
Sbjct: 119 RIMEAGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAENIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE-EVYVAPATATSI 227
+VKI+ P LPD I+ E E YVA S+
Sbjct: 179 RVKIIP---------PEAELPDDFEIYEDVEVEDYVADTDGESV 213
>gi|408381916|ref|ZP_11179463.1| 30S ribosomal protein S3P [Methanobacterium formicicum DSM 3637]
gi|407815364|gb|EKF85949.1| 30S ribosomal protein S3P [Methanobacterium formicicum DSM 3637]
Length = 426
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 116/223 (52%), Gaps = 11/223 (4%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLEKELDRAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ ++ VE+ ++V+ L A + L G+ RR Y LR IM
Sbjct: 63 AITQNLKNSYELENPQVEV--KEVDVPELNPKIMAHKISAMLQRGMHFRRVAYSALRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ KF DGY+ G+P +Y+ L+ GVLGI V+
Sbjct: 121 GAGAQGVEVTISGKIRGSRSACAKFTDGYIKKCGEPSIKYVKQGFATAPLKPGVLGISVR 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIELP 230
IM P LPD V I K E V A ++E P
Sbjct: 181 IM---------PPDVVLPDKVDIIQPKVEEPVESKAAEAVEAP 214
>gi|76803063|ref|YP_331158.1| 30S ribosomal protein S3P [Natronomonas pharaonis DSM 2160]
gi|91207821|sp|Q3IMY2.1|RS3_NATPD RecName: Full=30S ribosomal protein S3
gi|76558928|emb|CAI50524.1| 30S ribosomal protein S3 [Natronomonas pharaonis DSM 2160]
Length = 305
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 119/207 (57%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E + EL+ GY G+EV TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIHDGLQRTQIDEFFSEELSRAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++ F + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+I+SGK+ R++ KF GY+ +G+P +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIILSGKVTGARSRVEKFNRGYIKHNGEPAESIVDSGVGTAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
+VKI+ P LPD ++
Sbjct: 179 QVKIIP---------PEAELPDDFEVY 196
>gi|296109315|ref|YP_003616264.1| 30S ribosomal protein S3 [methanocaldococcus infernus ME]
gi|295434129|gb|ADG13300.1| ribosomal protein S3 [Methanocaldococcus infernus ME]
Length = 211
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 11/210 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E +EL + GYS E++ TP+ T++ I A R V+G +G RI+
Sbjct: 3 ERIFIKENVKKVLIDEFFKKELFKAGYSHCEIKKTPIGTKVTIYAERPGFVIGRRGSRIK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT ++ K FK +++ + V N L A AE + L G+ RR + +R +M
Sbjct: 63 ELTEILAKEFKLDRPQIDV--KPVENPDLDAQVVAEKIARALERGMHFRRVGHTAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG VI+SGKL +RA++ KF GYM G+P + +D L + GV+G+ VK
Sbjct: 121 NAGAKGVVVIISGKLTGERARTEKFMAGYMKHCGEPAEDLVDKGRAIALTKPGVIGVTVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
IM P LPD + I EV
Sbjct: 181 IMR---------PDVLLPDEIVIKEKDMEV 201
>gi|297619583|ref|YP_003707688.1| 30S ribosomal protein S3 [Methanococcus voltae A3]
gi|297378560|gb|ADI36715.1| ribosomal protein S3 [Methanococcus voltae A3]
Length = 218
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 111/203 (54%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V A +NE ++L + GYS ++V+ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVTNNVSEALINEYFCKKLVKAGYSHIDVKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT ++ +K +E+ +++ N L + L G+ R+ + +R +M
Sbjct: 63 ELTETLRTVYKIENPQIEV--KQIENADLDPAVVGHKIAASLEKGMHFRKTAHSAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG +IVSGKL +R+++ KF DGYM G+P E + + + L+ GV+G+ VK
Sbjct: 121 NAGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPSEELVMKSHQLAKLKLGVVGVTVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IML P LPD + I
Sbjct: 181 IML---------PDVSLPDEIVI 194
>gi|374630584|ref|ZP_09702969.1| SSU ribosomal protein S3P [Methanoplanus limicola DSM 2279]
gi|373908697|gb|EHQ36801.1| SSU ribosomal protein S3P [Methanoplanus limicola DSM 2279]
Length = 242
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S +++FV DGV A + + L +EL GY G E+ TP+ T++ I A + V+G+ G+
Sbjct: 1 MSVEKRFVEDGVRAARVEKFLVKELKRAGYGGTEIIRTPLGTQVTIFAEKPGIVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+RELTS +Q + +E+ ++V N A AE L L G R+A ++R
Sbjct: 61 VVRELTSTLQNDYGIESPQIEV--QQVENPSFNAQIMAERLANSLERGWYFRKAGSSIMR 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA GCEV+VSGKL RA+ KF +GY+ +G+P ++ + + G +G
Sbjct: 119 RIMESGALGCEVVVSGKLTGSRARVQKFTEGYIKHAGEPSETIVEHGFAIAVKKLGCIGC 178
Query: 185 KVKIM 189
+VKI+
Sbjct: 179 QVKIV 183
>gi|289597187|ref|YP_003483883.1| 30S ribosomal protein S3 [Aciduliprofundum boonei T469]
gi|289534974|gb|ADD09321.1| ribosomal protein S3 [Aciduliprofundum boonei T469]
Length = 237
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 112/205 (54%), Gaps = 12/205 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV + V + E L +E A G+ G+E++ TP+ T II+ R V+G KG +I+
Sbjct: 3 ERKFVKENVNRLLMKEYLMKETAMAGFGGLEIQRTPLGTRIILEVERPGMVIGRKGAKIK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +Q+ F ++E+ ++ N L A A+ L L G RRA + LR IM
Sbjct: 63 ELTDKLQQDFGVENPTIEV--KESPNPYLNAQIMAQKLAMALERGWHFRRAGHSTLRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
E+GAKG ++I+SGKL RA++ KF DG + +G+PV E + + G++G+ VK
Sbjct: 121 EAGAKGAQIIISGKLTGDRARTEKFMDGTIKYNGKPV-ELVRMGYATAKTKPGIIGVTVK 179
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHP 212
IM P LPD V I P
Sbjct: 180 IMP---------PDAKLPDEVNILP 195
>gi|15668638|ref|NP_247436.1| 30S ribosomal protein S3 [Methanocaldococcus jannaschii DSM 2661]
gi|1710763|sp|P54034.1|RS3_METJA RecName: Full=30S ribosomal protein S3
gi|1591163|gb|AAB98450.1| SSU ribosomal protein S3P (rpsC) [Methanocaldococcus jannaschii DSM
2661]
Length = 208
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +EL++ GYS ++R TP+ T+III A + V+G +G RIR
Sbjct: 3 ERTFVKENVKRLLIDEYFKKELSKAGYSHCDIRKTPIGTKIIIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + K F + +++ + V N L A A+ + L GL RR + +R +M
Sbjct: 63 ELTETLAKEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG VI+SGKL +RA++ KF GYM G+P E +D + GV+G+ VK
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGVIGVTVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IMR---------PDVLLPDEIII 194
>gi|282164896|ref|YP_003357281.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE]
gi|282157210|dbj|BAI62298.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE]
Length = 292
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 11/208 (5%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+KFV DG A ++E +L GY G+++ TP+ T+I IRA + ++G+ G+ IR+
Sbjct: 5 KKFVQDGFKKAMIDEFFLEKLERAGYGGMDINRTPMGTQITIRAEKPGMIIGKSGKMIRK 64
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
T + RFK ++ ++ ++V L A A L L G R+A L+ IM+
Sbjct: 65 FTKDLDVRFKM--DNPQIDVQEVKRPELNAQMMATRLANALERGWYFRKAGQSTLQRIMD 122
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
SGA G E++++GKL R ++ KF GY+ G+PV E++D + G++G+KV+I
Sbjct: 123 SGAMGVEIVIAGKLTGPRKRTEKFIAGYIKHCGKPVEEFVDVGYARAKKKLGIIGVKVRI 182
Query: 189 MLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
M P + LPD + + P+K+E
Sbjct: 183 MP---------PGSVLPDHIEVLPIKKE 201
>gi|307354329|ref|YP_003895380.1| 30S ribosomal protein S3 [Methanoplanus petrolearius DSM 11571]
gi|307157562|gb|ADN36942.1| ribosomal protein S3 [Methanoplanus petrolearius DSM 11571]
Length = 241
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 109/199 (54%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R+FV DGV A + + L +EL GY G E+ TP+ T+I I A + V+G+ G+ +R
Sbjct: 4 ERRFVEDGVRAARVEKYLRKELKRAGYGGTEIVRTPLGTQITIYAEKPGIVIGKGGKVVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
E+TS +Q + +E+ ++V N A AE L L G R+A ++R IM
Sbjct: 64 EITSNLQNDYGIESPQIEV--QQVENPAFNAQIMAERLANSLERGWYFRKAGTSIIRRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGA GCEV++SGKL R++ KF +GY+ +G+P ++ + + GV+G +VK
Sbjct: 122 ESGALGCEVVISGKLTGARSRVQKFTEGYIKHAGEPSETIVEHGFAIAIKKLGVIGCQVK 181
Query: 188 IMLEWDQKGKQGPTTPLPD 206
I+ P LPD
Sbjct: 182 IVP---------PGAQLPD 191
>gi|242398285|ref|YP_002993709.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739]
gi|259495260|sp|C6A165.1|RS3_THESM RecName: Full=30S ribosomal protein S3
gi|242264678|gb|ACS89360.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739]
Length = 207
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 13/212 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +G+ ++E L +EL GY G++++ TP+ T+++I R V+G GR+IR
Sbjct: 4 ERYFIKEGIKEMLIDEYLEKELRRAGYGGLDIKKTPLGTKVVIFVERPGFVIGRGGRKIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT ++++RF +E+ E++ N A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERRFNLENPQIEV--EEIKNSYFNAKVQATRLAQALERGVHFRRAAYAAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GVLG+KV
Sbjct: 122 SNGARGVEIRISGKLTGERAKSVRFYQGYIAKVGNPAETLVSRGYAQALLKLGVLGVKVS 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 217
IM P LPD + I P++EEV
Sbjct: 182 IM---------PPDARLPDEIEIVEKPIEEEV 204
>gi|18978191|ref|NP_579548.1| 30S ribosomal protein S3 [Pyrococcus furiosus DSM 3638]
gi|397652533|ref|YP_006493114.1| 30S ribosomal protein S3 [Pyrococcus furiosus COM1]
gi|27734507|sp|Q8U004.1|RS3_PYRFU RecName: Full=30S ribosomal protein S3
gi|428697931|pdb|3J20|C Chain C, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (30s Ribosomal Subunit)
gi|18894000|gb|AAL81943.1| SSU ribosomal protein S3P [Pyrococcus furiosus DSM 3638]
gi|393190124|gb|AFN04822.1| 30S ribosomal protein S3P [Pyrococcus furiosus COM1]
Length = 210
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 119/212 (56%), Gaps = 13/212 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++K+F +E+ E++ N L A QA L L G+ RRA Y LR IM
Sbjct: 64 ELTRILEKQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 217
IM P LPD + I P++EEV
Sbjct: 182 IM---------PPGARLPDEIEIIEKPVEEEV 204
>gi|388501238|gb|AFK38685.1| unknown [Lotus japonicus]
Length = 78
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Query: 157 MISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
MISSGQPV +YIDSAVRHVLLRQGVLGIKVKIML+WD KGKQGP TPLPD+VTIH KEE
Sbjct: 1 MISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEE 60
Query: 217 VYVAPAT--ATSIELPVA 232
P A IE+PVA
Sbjct: 61 EEYRPVAVLANDIEVPVA 78
>gi|20089948|ref|NP_616023.1| 30S ribosomal protein S3 [Methanosarcina acetivorans C2A]
gi|27734505|sp|Q8TRU1.1|RS3_METAC RecName: Full=30S ribosomal protein S3
gi|19914909|gb|AAM04503.1| ribosomal protein S3p [Methanosarcina acetivorans C2A]
Length = 318
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L+ GY G+E+ TP+ T+I+I + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V ++ ++ A++V L A A L + G R+A + LR +M
Sbjct: 64 KLTRDVANKYSLENPQID--AQEVKRPELNAQMMASRLAASIERGWYFRKAGHNTLRAVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCEV++SGKL R++ KF DGY+ SG PV E +D + + G LG KV+
Sbjct: 122 NAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVEEVVDEGFAVAVKKLGTLGCKVR 181
Query: 188 IMLEWDQKGKQGPTTPLPD 206
I+ P LPD
Sbjct: 182 IIQ---------PGVVLPD 191
>gi|432332005|ref|YP_007250148.1| ribosomal protein S3, eukaryotic/archaeal type [Methanoregula
formicicum SMSP]
gi|432138714|gb|AGB03641.1| ribosomal protein S3, eukaryotic/archaeal type [Methanoregula
formicicum SMSP]
Length = 231
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 125/229 (54%), Gaps = 18/229 (7%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+A+GV A + + L++EL GY G+++ TP+ T++ I A + V+G+ G+ +
Sbjct: 4 ERKFIAEGVRKARVEKYLSKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKLVH 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + + +E+ ++VNN A AE L L G R+A +LR +M
Sbjct: 64 QLTQDLAQNYGVESPQIEV--QQVNNPSFNAQIMAERLANALERGWYFRKAGTSILRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+SGA GCEV+++GKL RA++ KF +GY+ G+P N ++ + + GV+G++VK
Sbjct: 122 DSGALGCEVVIAGKLTGARARTQKFTEGYIKHCGEPSNTIVEKGYAVAVKKLGVIGVQVK 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI------HPLKEEVYVAPATATSIELP 230
++ + LPD ++ P+ + V P + T +E P
Sbjct: 182 LVPAGAK---------LPDHFSVVEQEKKRPV-QNASVTPVSDTDVEEP 220
>gi|212223217|ref|YP_002306453.1| 30S ribosomal protein S3 [Thermococcus onnurineus NA1]
gi|254764554|sp|B6YSL9.1|RS3_THEON RecName: Full=30S ribosomal protein S3
gi|212008174|gb|ACJ15556.1| SSU ribosomal protein S3P; (rps3P) [Thermococcus onnurineus NA1]
Length = 208
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 119/211 (56%), Gaps = 13/211 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIKEGVREMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAYAAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 RNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVS 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI--HPLKEE 216
IM P LPD + + P++EE
Sbjct: 182 IM---------PPDAKLPDEIEVIEKPIQEE 203
>gi|326914668|ref|XP_003203646.1| PREDICTED: 40S ribosomal protein S3-like, partial [Meleagris
gallopavo]
Length = 63
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/63 (92%), Positives = 59/63 (93%)
Query: 55 TQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLA 114
TQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLA
Sbjct: 1 TQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLA 60
Query: 115 VRR 117
VRR
Sbjct: 61 VRR 63
>gi|448726788|ref|ZP_21709180.1| 30S ribosomal protein S3P [Halococcus morrhuae DSM 1307]
gi|445793834|gb|EMA44405.1| 30S ribosomal protein S3P [Halococcus morrhuae DSM 1307]
Length = 370
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 119/207 (57%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E ELA GY G+++ TP+ T+I++RA + V+G+ G+
Sbjct: 1 MATEQQFIEDGMQRTQIDEFFADELARAGYGGMDLAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++TS +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITSELEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA+G E+ ++GK+ R+++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPSQEIVDRGDGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD IH
Sbjct: 179 TVKIIP---------PNADLPDDFRIH 196
>gi|452210667|ref|YP_007490781.1| SSU ribosomal protein S3e (S3p) [Methanosarcina mazei Tuc01]
gi|452100569|gb|AGF97509.1| SSU ribosomal protein S3e (S3p) [Methanosarcina mazei Tuc01]
Length = 307
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 106/199 (53%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L GY G+E+ TP+ T+III + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLNRAGYGGMELNRTPMGTQIIIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V ++ ++ A++V L A A L + G R+A + +R +M
Sbjct: 64 KLTRDVATKYNLENPQID--AQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTIRAVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCEV++SGKL R++ KF DGY+ SG PV E +D + + G LG KV+
Sbjct: 122 NAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGHPVEEVVDEGFAVAIKKLGTLGCKVR 181
Query: 188 IMLEWDQKGKQGPTTPLPD 206
I+ P LPD
Sbjct: 182 IIQ---------PGVVLPD 191
>gi|21228232|ref|NP_634154.1| 30S ribosomal protein S3 [Methanosarcina mazei Go1]
gi|27734502|sp|Q8PV44.1|RS3_METMA RecName: Full=30S ribosomal protein S3
gi|20906688|gb|AAM31826.1| SSU ribosomal protein S3P [Methanosarcina mazei Go1]
Length = 307
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 106/199 (53%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L GY G+E+ TP+ T+III + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLNRAGYGGMELNRTPMGTQIIIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V ++ ++ A++V L A A L + G R+A + +R +M
Sbjct: 64 KLTRDVATKYNLENPQID--AQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTIRAVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCEV++SGKL R++ KF DGY+ SG PV E +D + + G LG KV+
Sbjct: 122 NAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGHPVEEVVDEGFAVAIKKLGTLGCKVR 181
Query: 188 IMLEWDQKGKQGPTTPLPD 206
I+ P LPD
Sbjct: 182 IIQ---------PGVVLPD 191
>gi|336477155|ref|YP_004616296.1| 30S ribosomal protein S3 [Methanosalsum zhilinae DSM 4017]
gi|335930536|gb|AEH61077.1| ribosomal protein S3 [Methanosalsum zhilinae DSM 4017]
Length = 311
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 125/228 (54%), Gaps = 19/228 (8%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A +NE ++L+ GY G+++ TP+ T+I I A + V+G+ G+ IR
Sbjct: 4 EKKFVQDGYVKASMNEYFAKQLSRAGYGGMDLNRTPMGTQITIYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V + + ++ ++ A++V N L A A L + G R+A + +R IM
Sbjct: 64 KLTREVDRMYNL--DNPQIDAQEVKNPALNAQIMASRLASSIERGWYFRKAGHNAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCE+++SGKL R++ K +GY+ +G+PV++ +D + + G +G V+
Sbjct: 122 GAGALGCEIVLSGKLTGSRSRVEKMVNGYIKHAGKPVDDIVDYGFATAVKKLGTIGCVVR 181
Query: 188 IMLEWDQKGKQGPTTPLPD---LVTIHPLKEEVYV----APATATSIE 228
I+ P LPD L+ + P+KEEV A +AT IE
Sbjct: 182 IIP---------PGAILPDNFNLIEV-PVKEEVKAESEEAKKSATGIE 219
>gi|337283650|ref|YP_004623124.1| 30S ribosomal protein S3P [Pyrococcus yayanosii CH1]
gi|334899584|gb|AEH23852.1| 30S ribosomal protein S3P [Pyrococcus yayanosii CH1]
Length = 210
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 119/212 (56%), Gaps = 13/212 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEYLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT V++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRVLERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 217
IM P LPD + I P++EEV
Sbjct: 182 IM---------PPEARLPDEIEIIEKPVEEEV 204
>gi|429190338|ref|YP_007176016.1| ribosomal protein S3, eukaryotic/archaeal type [Natronobacterium
gregoryi SP2]
gi|448326250|ref|ZP_21515617.1| 30S ribosomal protein S3P [Natronobacterium gregoryi SP2]
gi|429134556|gb|AFZ71567.1| ribosomal protein S3, eukaryotic/archaeal type [Natronobacterium
gregoryi SP2]
gi|445612907|gb|ELY66624.1| 30S ribosomal protein S3P [Natronobacterium gregoryi SP2]
Length = 317
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 117/207 (56%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFDLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +GQP E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEIVDEGQATAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD +H
Sbjct: 179 TVKIIP---------PNAQLPDDFHVH 196
>gi|452206442|ref|YP_007486564.1| 30S ribosomal protein S3 [Natronomonas moolapensis 8.8.11]
gi|452082542|emb|CCQ35800.1| 30S ribosomal protein S3 [Natronomonas moolapensis 8.8.11]
Length = 301
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 118/207 (57%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E EL+ GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQRTQIDEFFAEELSRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++ F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTTLEEDFDLDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM+SGA G E+I+SGK+ R++ KF GY+ +G+P +DS V +++ G +G+
Sbjct: 119 RIMDSGALGAEIILSGKVTGARSRVEKFNRGYIKHNGEPAETIVDSGVGTAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
+VKI+ P LPD ++
Sbjct: 179 RVKIIP---------PNAELPDDFEVY 196
>gi|304314259|ref|YP_003849406.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str.
Marburg]
gi|302587718|gb|ADL58093.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str.
Marburg]
Length = 275
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 11/207 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G++V+VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ +F VE+ ++V+ L A + L G+ RR Y +R IM
Sbjct: 63 AITQKLKSKFNLENPQVEV--KEVDVPELNPRIMAHKIAAMLQRGMHFRRVAYTTMRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ + KF DGY+ G+P +++ V L+ GVLG+ V+
Sbjct: 121 AAGAQGVEVTISGKIRGARSATAKFTDGYIKKCGEPSTKHVKEGFATVQLKPGVLGVYVR 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLK 214
IM P LPD V I K
Sbjct: 181 IMP---------PEVVLPDKVEIEAPK 198
>gi|397780850|ref|YP_006545323.1| 30S ribosomal protein S3P [Methanoculleus bourgensis MS2]
gi|396939352|emb|CCJ36607.1| 30S ribosomal protein S3P [Methanoculleus bourgensis MS2]
Length = 234
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 111/203 (54%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KF+++GV + + LT+EL GY G+++ TP+ T+I I A + V+G+ G+++R
Sbjct: 4 EKKFISEGVRNVRVEKFLTKELKRAGYGGMDITRTPLGTQITIFAEKPGIVIGKGGKQVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + F VE+ ++V N A AE L L G R+A +R +M
Sbjct: 64 QLTQDLATHFGIESPQVEV--QQVQNPNFSAQIMAERLANALERGWYFRKAGQSTIRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGA GCEVIV+GKL R+++ KF +GY+ SG+P ++ + + G +G++VK
Sbjct: 122 ESGALGCEVIVAGKLTGARSRTQKFTEGYVKHSGEPSETIVEKGYALAVKKLGTIGVQVK 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
I+ P LPD +
Sbjct: 182 IVP---------PGAKLPDTFEV 195
>gi|383625039|ref|ZP_09949445.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
gi|448697495|ref|ZP_21698535.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
gi|445781448|gb|EMA32304.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
Length = 318
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 117/207 (56%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFDLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +GQP E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEIVDEGQATAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD IH
Sbjct: 179 TVKIIP---------PDAQLPDDFEIH 196
>gi|374635645|ref|ZP_09707239.1| ribosomal protein S3 [Methanotorris formicicus Mc-S-70]
gi|373561498|gb|EHP87731.1| ribosomal protein S3 [Methanotorris formicicus Mc-S-70]
Length = 208
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV D + ++E + LA+ GYS +E+R TP+ T+I I A + V+G +G+R++
Sbjct: 3 ERIFVDDNIKEMLIDEYFKKALAKAGYSHMEIRKTPIGTKITIYAEKPGFVIGRRGKRVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT ++ +K + +E+ + +++ L A+ + L G+ RR + +R +M
Sbjct: 63 ELTETLENTYKVDKPQIEVKS--IDDPNLDPEVVAQKIASSLERGMHFRRVAHAAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG VI+SGKL +RA++ KF GYM G P + A + L+ GV+G+ VK
Sbjct: 121 NAGAKGVVVIISGKLTGERARTEKFMAGYMKHCGDPSETLVRKAFKLAKLKLGVIGVTVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD V I
Sbjct: 181 IM---------PPDIVLPDEVII 194
>gi|435848742|ref|YP_007310992.1| SSU ribosomal protein S3P [Natronococcus occultus SP4]
gi|433675010|gb|AGB39202.1| SSU ribosomal protein S3P [Natronococcus occultus SP4]
Length = 326
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 121/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFEEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +GQP E +D +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEVVDHGQATAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIE 228
VKI+ P LPD +H + V P + E
Sbjct: 179 DVKIIP---------PGAELPDDFQVHDEMDPEEVVPDAVEANE 213
>gi|333910788|ref|YP_004484521.1| 30S ribosomal protein S3 [Methanotorris igneus Kol 5]
gi|333751377|gb|AEF96456.1| ribosomal protein S3 [Methanotorris igneus Kol 5]
Length = 209
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + + ++E + LA+ GYS +E+R TP+ T+I I A + V+G KG+R++
Sbjct: 3 ERVFVEESIKEMLIDEYFKKTLAKAGYSHMEIRKTPIGTKITIYAEKPGFVIGRKGKRVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT ++K +K N ++ + + + L A+ + L G+ RR + +R +M
Sbjct: 63 ELTETLEKTYKV--NKPQIEVKPIEDPNLDPEVVAQKIATSLERGMHFRRVAHAAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG VI+SGKL +RA++ KF GYM G P + A + L+ GV+G+ VK
Sbjct: 121 NAGAKGVVVIISGKLTGERARTEKFMAGYMKHCGDPSETLVRKAFKLAKLKLGVIGVTVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD V I
Sbjct: 181 IM---------PPDIVLPDEVII 194
>gi|124484916|ref|YP_001029532.1| 30S ribosomal protein S3P [Methanocorpusculum labreanum Z]
gi|152060873|sp|A2SPK9.1|RS3_METLZ RecName: Full=30S ribosomal protein S3
gi|124362457|gb|ABN06265.1| SSU ribosomal protein S3P [Methanocorpusculum labreanum Z]
Length = 231
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 111/199 (55%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFVADGV + + L +EL GY G+++ TPV T++ I A + V+G+ G+ +R
Sbjct: 4 EKKFVADGVRKVRVEQYLNKELKRAGYGGMDIVRTPVGTQVTIFAEKPGIVIGKGGKLVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT+ + + VE+ ++V N L A AE L L G R+A V+R +M
Sbjct: 64 QLTTDLSTVYGIESPQVEV--QQVANPNLNAQIMAERLANALERGWYFRKAGTSVIRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+SGA GCEVI++GKL RA+ KF +GY+ SG+P ++ + + G++G++VK
Sbjct: 122 DSGALGCEVIIAGKLTGARARVQKFVEGYIKHSGEPSESIVEKGYATAIKKLGIIGVQVK 181
Query: 188 IMLEWDQKGKQGPTTPLPD 206
I+ P LPD
Sbjct: 182 IVP---------PGAKLPD 191
>gi|289193197|ref|YP_003459138.1| 30S ribosomal protein S3 [Methanocaldococcus sp. FS406-22]
gi|288939647|gb|ADC70402.1| ribosomal protein S3 [Methanocaldococcus sp. FS406-22]
Length = 207
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +EL+ GYS ++R TP+ T+III A + V+G +G RIR
Sbjct: 3 ERTFVKENVKRLLIDEYFKKELSRAGYSHCDIRKTPIGTKIIIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + K F + +++ + V N L A A+ + L GL RR + +R +M
Sbjct: 63 ELTEKLAKEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG VI+SGKL +RA++ KF GYM G+P E +D + G++G+ VK
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGIIGVTVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IMR---------PDVLLPDEIII 194
>gi|448737868|ref|ZP_21719901.1| 30S ribosomal protein S3P [Halococcus thailandensis JCM 13552]
gi|445802830|gb|EMA53131.1| 30S ribosomal protein S3P [Halococcus thailandensis JCM 13552]
Length = 383
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 119/207 (57%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E ELA GY G+++ TP+ T+I++RA + V+G+ G+
Sbjct: 1 MATEQEFIEDGMQRTQIDEFFADELARAGYGGMDLAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++TS +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITSELEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA+G E+ ++GK+ R+++ KF GY+ +G+P + +D +++ G +G+
Sbjct: 119 RIMDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPSQDIVDRGDGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD IH
Sbjct: 179 TVKIIP---------PNADLPDDFRIH 196
>gi|126178520|ref|YP_001046485.1| 30S ribosomal protein S3P [Methanoculleus marisnigri JR1]
gi|152060874|sp|A3CT03.1|RS3_METMJ RecName: Full=30S ribosomal protein S3
gi|125861314|gb|ABN56503.1| SSU ribosomal protein S3P [Methanoculleus marisnigri JR1]
Length = 234
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 115/215 (53%), Gaps = 13/215 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KF+ DGV + + LT+EL GY G+++ TP+ T++ I A + V+G+ G+++R
Sbjct: 4 EKKFITDGVRNVRVEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + VE+ ++V N A AE L L G R+A +R IM
Sbjct: 64 QLTQDLATDYDIESPQVEV--QQVQNPNFNAQIMAERLANALERGWYFRKAGSSTIRRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGA GCEVIV+GKL R+++ KF +GY+ G+P ++ + + G +G++VK
Sbjct: 122 ESGALGCEVIVAGKLTGSRSRTQKFTEGYIKHCGEPSETIVEKGYALAIKKLGTIGVQVK 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPA 222
I+ P LPD + L+ E APA
Sbjct: 182 IVP---------PDARLPDAFDV--LEPEPKKAPA 205
>gi|448704122|ref|ZP_21700603.1| 30S ribosomal protein S3P [Halobiforma nitratireducens JCM 10879]
gi|445796511|gb|EMA47015.1| 30S ribosomal protein S3P [Halobiforma nitratireducens JCM 10879]
Length = 320
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 116/207 (56%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + V++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFDLEDPQVDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +GQP E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEIVDEGQATAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD +H
Sbjct: 179 TVKIIP---------PNAQLPDDFHVH 196
>gi|269861307|ref|XP_002650365.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348]
gi|220066196|gb|EED43690.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348]
Length = 214
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 112/201 (55%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
+ + +G AEL+E+ + ++ Y+G+E+++ +I I+ +L +K ++L
Sbjct: 8 QIIKEGKIKAELDELFGKLFQKETYAGIELKMNQTPIQIFIKVLNPAELLEKKPMIQKQL 67
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
+++ +R + + EK+ ++ L AE LR + +R ++R + ++
Sbjct: 68 QNMIAQRLNMIPEHIRIVFEKIIDKALEPAYHAELLRQAFINVQPYKRTINSIIRSVRQA 127
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
G +G + VSGK++ QRAK+ KF DG +I +GQP EYI A L +QGV+GI++ IM
Sbjct: 128 GGQGVCIRVSGKIKGQRAKATKFIDGLLIQAGQPAKEYIRKAKAIALCKQGVIGIQISIM 187
Query: 190 LEWDQKGKQGPTTPLPDLVTI 210
L +D +G +GP+ + D + +
Sbjct: 188 LPYDSEGIRGPSELIADKIKV 208
>gi|383319759|ref|YP_005380600.1| 30S ribosomal protein S3 [Methanocella conradii HZ254]
gi|379321129|gb|AFD00082.1| SSU ribosomal protein S3P [Methanocella conradii HZ254]
Length = 280
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 11/209 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L GY G+E+ TP+ T+I I+A + ++G+ G+ IR
Sbjct: 4 EKKFVQDGFKKAMIDEFFLEKLERAGYGGMEINRTPMGTQITIKAEKPGMIIGKSGKMIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+ T + RFK ++ ++ ++V L A A L L G R+A L+ IM
Sbjct: 64 KFTRDLDVRFKM--DNPQIDVQEVKKPELNAQMMATRLANALERGWYFRKAGQSTLQRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
++GA G E++++GKL R ++ KF GY+ G+PV ++ID + GV+G+KV+
Sbjct: 122 DAGAMGVEIVIAGKLTGPRKRTEKFIAGYIKHCGKPVEQFIDVGYARAKKKLGVIGVKVR 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
IM P T LPD + I P ++E
Sbjct: 182 IMP---------PGTVLPDHIEIVPPQKE 201
>gi|389853111|ref|YP_006355345.1| 30S ribosomal protein S3 [Pyrococcus sp. ST04]
gi|388250417|gb|AFK23270.1| rpsC, small subunit ribosomal protein S3 [Pyrococcus sp. ST04]
Length = 210
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 121/219 (55%), Gaps = 15/219 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT +++ +F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 QLTRILESQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI--HPLKEEVYVAPATA 224
IM P LPD + I P++EE VAP A
Sbjct: 182 IM---------PPDARLPDEIEIIEKPVEEE--VAPNEA 209
>gi|315229862|ref|YP_004070298.1| 30S ribosomal protein S3e (S3p) [Thermococcus barophilus MP]
gi|315182890|gb|ADT83075.1| SSU ribosomal protein S3e (S3p) [Thermococcus barophilus MP]
Length = 207
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 119/212 (56%), Gaps = 13/212 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVKEMLIDEYLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAYAAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 217
IM P LPD + I PL+EEV
Sbjct: 182 IM---------PPEARLPDEIEIIEKPLEEEV 204
>gi|88603493|ref|YP_503671.1| 30S ribosomal protein S3 [Methanospirillum hungatei JF-1]
gi|121731027|sp|Q2FT39.1|RS3_METHJ RecName: Full=30S ribosomal protein S3
gi|88188955|gb|ABD41952.1| SSU ribosomal protein S3P [Methanospirillum hungatei JF-1]
Length = 237
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFVADGV + L EL GY G+++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVADGVRKVRVERHLGHELKRAGYGGMDLIRTPLGTQVTIFAEKPGIVIGKGGKVVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
LT + + +E+ ++V+N L A AE L L G R+A LR IM
Sbjct: 64 TLTQDLATTYGVESPQIEV--QQVDNPNLNAQIMAERLASALERGWYFRKAGSSTLRRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+SGA GCEV++SGKL R + KF +GY+ SG PVN +D + + GV+G++V+
Sbjct: 122 DSGALGCEVVISGKLTGARGRVQKFTEGYIKHSGDPVNTLVDKGYAVAIKKLGVIGVQVR 181
Query: 188 IMLEWDQKGKQGPTTPLPD 206
++ P LPD
Sbjct: 182 LIP---------PGAQLPD 191
>gi|257053365|ref|YP_003131198.1| 30S ribosomal protein S3P [Halorhabdus utahensis DSM 12940]
gi|256692128|gb|ACV12465.1| ribosomal protein S3 [Halorhabdus utahensis DSM 12940]
Length = 326
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 122/225 (54%), Gaps = 12/225 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADELQFIQDGIQRTQIDEFFEDELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++ F + V++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGAKG E+++SGK+ R++ KF GY+ +G+P + +D +++ G +G+
Sbjct: 119 RIMESGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEDIVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE-EVYVAPATATSIE 228
VKI+ P LPD I+ E E YV S+E
Sbjct: 179 DVKIIP---------PNAELPDDFEIYEDVEVEDYVEDVEEGSVE 214
>gi|432328995|ref|YP_007247139.1| ribosomal protein S3, eukaryotic/archaeal type [Aciduliprofundum
sp. MAR08-339]
gi|432135704|gb|AGB04973.1| ribosomal protein S3, eukaryotic/archaeal type [Aciduliprofundum
sp. MAR08-339]
Length = 239
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 114/209 (54%), Gaps = 12/209 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV + V + E L +E A G+ G+E++ TP+ T I++ R V+G KG +I+
Sbjct: 3 ERKFVKESVNRLLMKEYLMKETAMAGFGGLEIQRTPLGTRIVLEVERPGMVIGRKGAKIK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +Q+ F ++E+ ++ +N L A A+ L L G RRA + LR IM
Sbjct: 63 ELTDRLQQDFGVENPTIEV--KESDNPYLNAQIMAQKLAMALERGWHFRRAGHSTLRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
E+GAKG ++I++GKL RA++ KF G + +G+PV E + + G++G+ VK
Sbjct: 121 EAGAKGAQIIIAGKLTGDRARTEKFMAGTIKYNGKPV-ELVRFGYATAKTKPGIIGVTVK 179
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
IM P LPD + I P EE
Sbjct: 180 IMP---------PDAKLPDEINIIPPSEE 199
>gi|15678039|ref|NP_275153.1| 30S ribosomal protein S3 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6094177|sp|O26116.1|RS3_METTH RecName: Full=30S ribosomal protein S3
gi|2621055|gb|AAB84528.1| ribosomal protein S3 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 258
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 11/204 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G++V+VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ +F VE+ ++V+ L A + L G+ RR Y +R IM
Sbjct: 63 AITQKLKNKFDLENPQVEV--KEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTTMRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ + KF DGY+ G+P +++ V L+ GVLG+ V+
Sbjct: 121 AAGAQGVEVTISGKIRGARSATAKFTDGYIKKCGEPSVKHVREGFATVQLKPGVLGVYVR 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIH 211
IM P LPD V I
Sbjct: 181 IMP---------PDVVLPDKVEIE 195
>gi|355571377|ref|ZP_09042629.1| ribosomal protein S3 [Methanolinea tarda NOBI-1]
gi|354825765|gb|EHF09987.1| ribosomal protein S3 [Methanolinea tarda NOBI-1]
Length = 239
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 108/182 (59%), Gaps = 2/182 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFVA+G A + + L +EL GY G++++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVAEGARRARVEKHLKKELKRAGYGGMDLQRTPLGTQVTIFAEKPGIVIGKGGKLVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + F +E+ ++V N A AE L L G R+A ++R +M
Sbjct: 64 QLTQDLATDFAVESPQIEV--QQVPNPNFNAQIMAERLANALERGWYFRKAGQSIIRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
++GA GCEVI++GKL RA+ KF +GY+ SG+PVN ++ + + GV+G++VK
Sbjct: 122 DAGALGCEVIIAGKLTGARARVQKFTEGYIKHSGEPVNTIVEKGYAVAVKKLGVIGVQVK 181
Query: 188 IM 189
I+
Sbjct: 182 II 183
>gi|152060913|sp|A1RXG6.2|RS3_THEPD RecName: Full=30S ribosomal protein S3
Length = 202
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 105/181 (58%), Gaps = 2/181 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
RK ++ G+ + LNE L R+L Y + TP+ T++I+ A V+G KG I+
Sbjct: 6 RKVISQGLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKA 65
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ V+++ F +++ +V N+ L A A + L+ G+ RRA L IM
Sbjct: 66 IAEVLEREFGIENPQIDVV--EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMA 123
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+GA+G E+++SGKL +QR ++ KF GY+ SG+P E +D A+ HVLL+ G+ G+KV+I
Sbjct: 124 AGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRI 183
Query: 189 M 189
M
Sbjct: 184 M 184
>gi|332158018|ref|YP_004423297.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2]
gi|331033481|gb|AEC51293.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2]
Length = 210
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 13/212 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++K+F +++ +++ N L A QA + L G+ RRA Y +R IM
Sbjct: 64 ELTRILEKQFGLENPQIDV--QEIKNPYLNAKVQAVRIAQALERGIHFRRAAYAAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 217
IM P LPD + I P++EEV
Sbjct: 182 IM---------PPDARLPDEIEIIEKPVEEEV 204
>gi|335437506|ref|ZP_08560282.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|335438903|ref|ZP_08561634.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|334890174|gb|EGM28448.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|334895854|gb|EGM34017.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
Length = 326
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 121/225 (53%), Gaps = 12/225 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E EL GY G+EV TP+ T+I++ A + V+G+ G+
Sbjct: 1 MADELQFIEDGLQRTQIDEFFEDELGRAGYGGMEVAKTPMGTQIVLEAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++ F + V++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGAKG E+++SGK+ R++ KF GY+ +G+P + +D +++ G +G+
Sbjct: 119 RIMESGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEDIVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE-EVYVAPATATSIE 228
VKI+ P LPD I+ E E YV S+E
Sbjct: 179 DVKIIP---------PEAELPDDFEIYEDVEVEDYVEDVEEGSVE 214
>gi|448350187|ref|ZP_21539006.1| 30S ribosomal protein S3P [Natrialba taiwanensis DSM 12281]
gi|445637694|gb|ELY90842.1| 30S ribosomal protein S3P [Natrialba taiwanensis DSM 12281]
Length = 328
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 117/207 (56%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFDLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAAEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD IH
Sbjct: 179 TVKIIP---------PNAELPDDFEIH 196
>gi|261402351|ref|YP_003246575.1| 30S ribosomal protein S3 [Methanocaldococcus vulcanius M7]
gi|261369344|gb|ACX72093.1| ribosomal protein S3 [Methanocaldococcus vulcanius M7]
Length = 206
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + + ++E +EL+ GYS +R TP+ T+III A + V+G +G RIR
Sbjct: 3 ERTFVKEHIKEFLIDEYFKKELSRAGYSHCYIRKTPIGTKIIIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + K F + +++ + V N L A A+ + L G+ RR + +R +M
Sbjct: 63 ELTETLAKEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGMHFRRVGHTAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG VI+SGKL +RA++ KF GYM G+P E +D + GV+G+ VK
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKGSAIAKTKPGVIGVTVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IMR---------PDVLLPDEIII 194
>gi|288560114|ref|YP_003423600.1| 30S ribosomal protein S3 [Methanobrevibacter ruminantium M1]
gi|288542824|gb|ADC46708.1| ribosomal protein S3P Rps3p [Methanobrevibacter ruminantium M1]
Length = 251
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G+E++VTP+ T +I+ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLRRTRIDEYLEKELERAGYGGMEIQVTPLGTMVIVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ +F VE+ V L A A + L G+ RR Y +R IM
Sbjct: 63 AITQSLKTKFDLDNPQVEVKEVAVPE--LNARIMASKIANMLQRGMHFRRVAYSTIRKIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ KF +GY+ G+P ++ L+ GVLGI V+
Sbjct: 121 GAGAQGVEVTISGKIRGSRSAVAKFTEGYIKKCGEPATRFVTEGFATAPLKPGVLGIVVR 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD V I
Sbjct: 181 IMP---------PEATLPDKVDI 194
>gi|448475304|ref|ZP_21603022.1| 30S ribosomal protein S3P [Halorubrum aidingense JCM 13560]
gi|445816775|gb|EMA66662.1| 30S ribosomal protein S3P [Halorubrum aidingense JCM 13560]
Length = 313
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 119/219 (54%), Gaps = 11/219 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++TS ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITSELEDRFGMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPAT 223
VKI+ P LPD I E V AT
Sbjct: 179 TVKIIP---------PGAKLPDDFDIREDAEVPEVEQAT 208
>gi|448352603|ref|ZP_21541385.1| 30S ribosomal protein S3P [Natrialba hulunbeirensis JCM 10989]
gi|445642165|gb|ELY95235.1| 30S ribosomal protein S3P [Natrialba hulunbeirensis JCM 10989]
Length = 330
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 117/207 (56%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEGQGTAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD IH
Sbjct: 179 TVKIIP---------PNAELPDDFQIH 196
>gi|375083288|ref|ZP_09730314.1| 30S ribosomal protein S3P [Thermococcus litoralis DSM 5473]
gi|374742019|gb|EHR78431.1| 30S ribosomal protein S3P [Thermococcus litoralis DSM 5473]
Length = 207
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 13/212 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + + ++E L +EL GY G++++ TP+ T+++I A R V+G GR+IR
Sbjct: 4 ERYFIKESIKEMLIDEYLEKELRRAGYGGLDIKKTPLGTKVVIFAERPGFVIGRGGRKIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYFNAKVQATRLAQALERGVHFRRAAYAAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GVLG+KV
Sbjct: 122 NNGARGVEIRISGKLTGERAKSVRFYQGYIAKVGNPAETLVSRGYAQALLKLGVLGVKVS 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 217
IM P LPD + I P++EEV
Sbjct: 182 IM---------PPDARLPDEIEIIEKPVEEEV 204
>gi|14520552|ref|NP_126027.1| 30S ribosomal protein S3P [Pyrococcus abyssi GE5]
gi|17367830|sp|Q9V1U1.1|RS3_PYRAB RecName: Full=30S ribosomal protein S3
gi|5457768|emb|CAB49258.1| rps3P SSU ribosomal protein S3P [Pyrococcus abyssi GE5]
gi|380741079|tpe|CCE69713.1| TPA: 30S ribosomal protein S3P [Pyrococcus abyssi GE5]
Length = 210
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 13/212 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +++ +++ N L A QA + L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIDV--QEIKNPYLNAKVQAVRIAQALERGIHFRRAAYAAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 SNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI--HPLKEEV 217
IM P LPD + I P++EEV
Sbjct: 182 IM---------PPDARLPDEIEIIEKPVEEEV 204
>gi|432092120|gb|ELK24807.1| 40S ribosomal protein S3 [Myotis davidii]
Length = 133
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 69/100 (69%), Gaps = 2/100 (2%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
ME GA GCEV+VSGKL+ QRA S+K DG MI SG PVN Y+D+AV H L R+G LGIKV
Sbjct: 1 MERGADGCEVVVSGKLQGQRAASVKVVDGLMIRSGDPVNCYVDTAVHHGLPRRGGLGIKV 60
Query: 187 KIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
KI L WD GK+GP P PD V+ K+E+ P+T S
Sbjct: 61 KITLPWDPGGKRGPKKPPPDCVSTVEPKDEIL--PSTPIS 98
>gi|448463236|ref|ZP_21598014.1| 30S ribosomal protein S3P [Halorubrum kocurii JCM 14978]
gi|445817231|gb|EMA67107.1| 30S ribosomal protein S3P [Halorubrum kocurii JCM 14978]
Length = 312
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 115/206 (55%), Gaps = 11/206 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI 210
VKI+ P LPD I
Sbjct: 179 NVKIIP---------PGAKLPDDFDI 195
>gi|289579904|ref|YP_003478370.1| 30S ribosomal protein S3 [Natrialba magadii ATCC 43099]
gi|448281144|ref|ZP_21472452.1| 30S ribosomal protein S3P [Natrialba magadii ATCC 43099]
gi|289529457|gb|ADD03808.1| ribosomal protein S3 [Natrialba magadii ATCC 43099]
gi|445579468|gb|ELY33862.1| 30S ribosomal protein S3P [Natrialba magadii ATCC 43099]
Length = 335
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 116/207 (56%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEGQGTAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD IH
Sbjct: 179 TVKIIP---------PNAELPDDFQIH 196
>gi|448369933|ref|ZP_21556386.1| 30S ribosomal protein S3P [Natrialba aegyptia DSM 13077]
gi|445650373|gb|ELZ03297.1| 30S ribosomal protein S3P [Natrialba aegyptia DSM 13077]
Length = 328
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 117/207 (56%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFDLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAAEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD IH
Sbjct: 179 TVKIIP---------PNAELPDDFEIH 196
>gi|448358810|ref|ZP_21547484.1| 30S ribosomal protein S3P [Natrialba chahannaoensis JCM 10990]
gi|445644490|gb|ELY97503.1| 30S ribosomal protein S3P [Natrialba chahannaoensis JCM 10990]
Length = 329
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 116/207 (56%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEGQGTAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD IH
Sbjct: 179 TVKIIP---------PNAELPDDFQIH 196
>gi|134045220|ref|YP_001096706.1| 30S ribosomal protein S3P [Methanococcus maripaludis C5]
gi|189045017|sp|A4FWB6.1|RS3_METM5 RecName: Full=30S ribosomal protein S3
gi|132662845|gb|ABO34491.1| SSU ribosomal protein S3P [Methanococcus maripaludis C5]
Length = 211
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + K + +E+ ++V N L + L G+ RR + +R +M
Sbjct: 63 ELTETLAKEYAVKNPQIEV--KQVENPDLDPAIVGHKIASSLERGMHFRRTAHSAIRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
SGAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ GV+G+ VK
Sbjct: 121 GSGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD +TI
Sbjct: 181 IM---------KPDVTLPDEITI 194
>gi|222480851|ref|YP_002567088.1| 30S ribosomal protein S3P [Halorubrum lacusprofundi ATCC 49239]
gi|222453753|gb|ACM58018.1| ribosomal protein S3 [Halorubrum lacusprofundi ATCC 49239]
Length = 312
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 115/206 (55%), Gaps = 11/206 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI 210
VKI+ P LPD I
Sbjct: 179 NVKIIP---------PGAQLPDDFDI 195
>gi|448362298|ref|ZP_21550909.1| 30S ribosomal protein S3P [Natrialba asiatica DSM 12278]
gi|445648819|gb|ELZ01767.1| 30S ribosomal protein S3P [Natrialba asiatica DSM 12278]
Length = 326
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 117/207 (56%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFDLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAAEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD IH
Sbjct: 179 TVKIIP---------PNAELPDDFEIH 196
>gi|448460071|ref|ZP_21596991.1| 30S ribosomal protein S3P [Halorubrum lipolyticum DSM 21995]
gi|445807789|gb|EMA57870.1| 30S ribosomal protein S3P [Halorubrum lipolyticum DSM 21995]
Length = 314
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 115/206 (55%), Gaps = 11/206 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI 210
VKI+ P LPD I
Sbjct: 179 NVKIIP---------PGAQLPDDFDI 195
>gi|448441443|ref|ZP_21589106.1| 30S ribosomal protein S3P [Halorubrum saccharovorum DSM 1137]
gi|445688852|gb|ELZ41099.1| 30S ribosomal protein S3P [Halorubrum saccharovorum DSM 1137]
Length = 312
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 115/206 (55%), Gaps = 11/206 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI 210
VKI+ P LPD I
Sbjct: 179 NVKIIP---------PGAQLPDDFDI 195
>gi|448503706|ref|ZP_21613335.1| 30S ribosomal protein S3P [Halorubrum coriense DSM 10284]
gi|445691907|gb|ELZ44090.1| 30S ribosomal protein S3P [Halorubrum coriense DSM 10284]
Length = 312
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 116/206 (56%), Gaps = 11/206 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI 210
VKI+ P LPD I
Sbjct: 179 NVKIIP---------PGATLPDDFEI 195
>gi|448508622|ref|ZP_21615573.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 9100]
gi|448517695|ref|ZP_21617269.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 10118]
gi|445697248|gb|ELZ49318.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 9100]
gi|445705910|gb|ELZ57798.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 10118]
Length = 314
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 115/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 NVKIIP---------PGATLPD 191
>gi|448489446|ref|ZP_21607669.1| 30S ribosomal protein S3P [Halorubrum californiensis DSM 19288]
gi|445694818|gb|ELZ46936.1| 30S ribosomal protein S3P [Halorubrum californiensis DSM 19288]
Length = 313
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 115/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 NVKIIP---------PGATLPD 191
>gi|448426501|ref|ZP_21583350.1| 30S ribosomal protein S3P [Halorubrum terrestre JCM 10247]
gi|448452129|ref|ZP_21593149.1| 30S ribosomal protein S3P [Halorubrum litoreum JCM 13561]
gi|448484340|ref|ZP_21606047.1| 30S ribosomal protein S3P [Halorubrum arcis JCM 13916]
gi|445679381|gb|ELZ31848.1| 30S ribosomal protein S3P [Halorubrum terrestre JCM 10247]
gi|445809773|gb|EMA59811.1| 30S ribosomal protein S3P [Halorubrum litoreum JCM 13561]
gi|445820115|gb|EMA69944.1| 30S ribosomal protein S3P [Halorubrum arcis JCM 13916]
Length = 314
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 115/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 NVKIIP---------PGATLPD 191
>gi|448535702|ref|ZP_21622222.1| 30S ribosomal protein S3P [Halorubrum hochstenium ATCC 700873]
gi|445703203|gb|ELZ55138.1| 30S ribosomal protein S3P [Halorubrum hochstenium ATCC 700873]
Length = 312
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 NVKIIP---------PGATLPD 191
>gi|262401161|gb|ACY66483.1| putative 40S ribosomal protein RPS3 [Scylla paramamosain]
Length = 66
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/66 (80%), Positives = 58/66 (87%)
Query: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNE 166
YKL+GGLAVRRACYGVL FIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG+P
Sbjct: 1 YKLVGGLAVRRACYGVLCFIMESGAKGCEVVVSGKLRGQRAKSMKFTDGLMIHSGEPRRH 60
Query: 167 YIDSAV 172
Y+D+AV
Sbjct: 61 YVDAAV 66
>gi|448436258|ref|ZP_21587059.1| 30S ribosomal protein S3P [Halorubrum tebenquichense DSM 14210]
gi|445682926|gb|ELZ35336.1| 30S ribosomal protein S3P [Halorubrum tebenquichense DSM 14210]
Length = 312
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 NVKIIP---------PGATLPD 191
>gi|147919328|ref|YP_686936.1| 30S ribosomal protein S3P [Methanocella arvoryzae MRE50]
gi|121687826|sp|Q0W1Y3.1|RS3_UNCMA RecName: Full=30S ribosomal protein S3
gi|110622332|emb|CAJ37610.1| 30S ribosomal protein S3P [Methanocella arvoryzae MRE50]
Length = 279
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 107/204 (52%), Gaps = 11/204 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A ++E +L GY G+E+ TP+ T+I ++A + ++G+ G+ IR
Sbjct: 4 EKKFVQEGFKKAMVDEYFLEKLERAGYGGMEINRTPMGTQITLKAEKPGMIIGKAGKSIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
T + RFK +++ ++V L A A L L G R+A L+ IM
Sbjct: 64 RYTKEMDMRFKMDNPQIDV--QEVKKPELNAQMMATRLANALERGWYFRKAGQSTLQRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+SGA GCEVI++GKL R + KF GY+ G+PV E +D + G++G+KV+
Sbjct: 122 DSGAMGCEVIIAGKLTGARKRREKFIAGYIKHCGKPVEELVDVGYARAKKKLGIIGVKVR 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIH 211
IM P LPD +TI
Sbjct: 182 IMP---------PEAVLPDQITIE 196
>gi|148642816|ref|YP_001273329.1| 30S ribosomal protein S3P [Methanobrevibacter smithii ATCC 35061]
gi|222445047|ref|ZP_03607562.1| hypothetical protein METSMIALI_00664 [Methanobrevibacter smithii
DSM 2375]
gi|261350384|ref|ZP_05975801.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374]
gi|172048064|sp|A5UL83.1|RS3_METS3 RecName: Full=30S ribosomal protein S3
gi|148551833|gb|ABQ86961.1| ribosomal protein S3p [Methanobrevibacter smithii ATCC 35061]
gi|222434612|gb|EEE41777.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2375]
gi|288861167|gb|EFC93465.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374]
Length = 250
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 11/207 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G++V++TP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLEKELERAGYGGMDVQITPLGTMVVVYAERPGMVIGRGGKNVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T+ ++ F +E+ ++V+ L A + L G+ RR Y +R IM
Sbjct: 63 AITNTLKNDFGLDNPQIEV--KEVSVPELNPKIMAYKIANMLQRGMHFRRVAYSTIRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ KF +GY+ G+P ++ V L+ GVLGI V+
Sbjct: 121 GAGAQGVEVTISGKIRGSRSAVAKFVEGYIKKCGEPSIRLVEEGFATVQLKPGVLGIYVR 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLK 214
IM P T LPD V I P K
Sbjct: 181 IM---------PPETVLPDSVEILPPK 198
>gi|345005649|ref|YP_004808502.1| 30S ribosomal protein S3 [halophilic archaeon DL31]
gi|344321275|gb|AEN06129.1| ribosomal protein S3 [halophilic archaeon DL31]
Length = 312
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 119/211 (56%), Gaps = 11/211 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ ++KF+ DG+ ++++E EL GY G+++ TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQKFIEDGLQRSQIDEFFADELGRAGYGGMDIAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR+++S +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVSSELEERFGMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
+ME+GA G E+++SGK+ R++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RMMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQTVVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKE 215
VK++ GP LPD I+ E
Sbjct: 179 NVKVI---------GPDAVLPDDFEIYETDE 200
>gi|300710381|ref|YP_003736195.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|448294705|ref|ZP_21484784.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|299124064|gb|ADJ14403.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|445586382|gb|ELY40664.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
Length = 302
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G+EV TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGMQRSQIDEFFATELERAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRQLEERFDLEDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P + +D + +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEDIVDKGLGTAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIE 228
VKI+ P LPD IH E + TA + E
Sbjct: 179 NVKIIP---------PGAQLPDDFEIHDDAEVEDLIAETADTDE 213
>gi|154150081|ref|YP_001403699.1| 30S ribosomal protein S3 [Methanoregula boonei 6A8]
gi|171769709|sp|A7I5P5.1|RS3_METB6 RecName: Full=30S ribosomal protein S3
gi|153998633|gb|ABS55056.1| ribosomal protein S3 [Methanoregula boonei 6A8]
Length = 231
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 107/182 (58%), Gaps = 2/182 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+A+G A + + LT+EL G+ G+++ TP+ T++ I A + V+G+ G+ +
Sbjct: 4 ERKFIAEGARKARVEKYLTKELKRAGFGGMDIARTPLGTQVTIFAEKPGIVIGKGGKLVH 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + + +E+ ++V N A AE L L G R+A ++R +M
Sbjct: 64 QLTQDLAQNYGVESPQIEV--QQVQNPSFNAQIMAERLANALERGWYFRKAGSSIMRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+SGA GCEV+++GKL RA++ KF +GY+ G+P N ++ + + GV+G++VK
Sbjct: 122 DSGALGCEVVIAGKLTGARARTQKFTEGYIKHCGEPSNTIVEKGYAIAIKKLGVIGVQVK 181
Query: 188 IM 189
I+
Sbjct: 182 IV 183
>gi|256810641|ref|YP_003128010.1| 30S ribosomal protein S3 [Methanocaldococcus fervens AG86]
gi|256793841|gb|ACV24510.1| ribosomal protein S3 [Methanocaldococcus fervens AG86]
Length = 207
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 107/203 (52%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + ++E +EL+ GYS ++R TP+ T+I I A + V+G +G RIR
Sbjct: 3 ERTFVKENTTKLLIDEYFKKELSRAGYSHCDIRKTPIGTKITIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + + F + +++ + V N L A A+ + L GL RR + +R +M
Sbjct: 63 ELTKTLAEEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG VI+SGKL +RA++ KF GYM G+P E +D + GV+G+ VK
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGVIGVTVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IMR---------PDVLLPDEIII 194
>gi|84489702|ref|YP_447934.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091]
gi|121729293|sp|Q2NFW2.1|RS3_METST RecName: Full=30S ribosomal protein S3
gi|84373021|gb|ABC57291.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091]
Length = 252
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +L GY G++++VTPV T +I+ A + V+G G+ +R
Sbjct: 3 EKDFVKEGLKRTRIDEYLETKLERAGYGGMDIQVTPVGTMVIVYAEKPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ F VE+ ++V+ L A + L G+ RR Y ++R IM
Sbjct: 63 AITKTLKNNFDLENPQVEV--KEVDVPELNPRIMAHKVVAMLQRGMQFRRVAYSIIRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ KF +GY+ G+P +Y+ V L+ GVLGI V+
Sbjct: 121 SAGAQGVEVTISGKIRGSRSACAKFNEGYIKKCGEPSIKYVKEGFATVQLKPGVLGIYVR 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IM---------PPEVTLPDNIEI 194
>gi|395644922|ref|ZP_10432782.1| ribosomal protein S3 [Methanofollis liminatans DSM 4140]
gi|395441662|gb|EJG06419.1| ribosomal protein S3 [Methanofollis liminatans DSM 4140]
Length = 236
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 119/221 (53%), Gaps = 17/221 (7%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV++GV + E L+REL GY G+++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVSEGVTRVRVEEYLSRELKRAGYGGMDIVRTPMGTQVTIFAEKPGIVIGKGGKLVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + F VE+ ++V N + A AE L L G R+A +R +M
Sbjct: 64 QLTQDLSTNFNLESPQVEV--QQVANPSVNAQIMAERLATALERGWYFRKAGQSTMRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGA GCE+++SGKL R++ KF +GY+ G+P ++ + + G++G++VK
Sbjct: 122 ESGALGCEIVLSGKLTGARSRVQKFLEGYVKHCGEPSITIVEKGYAIAIKKLGIIGVQVK 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIE 228
I + D K LPD + P K P +A ++E
Sbjct: 182 I-IPGDAK--------LPDRFEVLPPK------PYSAETVE 207
>gi|91772089|ref|YP_564781.1| 30S ribosomal protein S3P [Methanococcoides burtonii DSM 6242]
gi|121687004|sp|Q12ZU5.1|RS3_METBU RecName: Full=30S ribosomal protein S3
gi|91711104|gb|ABE51031.1| SSU ribosomal protein S3P [Methanococcoides burtonii DSM 6242]
Length = 304
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 110/199 (55%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E ++L+ GY G+++ TP+ T+I + A + V+G+ G+ IR
Sbjct: 4 EKKFVQDGYVKASMDEYFAKQLSRAGYGGMDINRTPMGTQITVYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V + + ++ ++ A++V L A A L + G R+A + +R +M
Sbjct: 64 KLTRDVDRLYDL--DNPQIDAQEVKRPELNAQMMASRLASSIERGWYFRKAGHNTMRAVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCE+++SGKL R++ K +GY+ +G+PV++ +D + + G LG KV+
Sbjct: 122 NAGALGCEIVISGKLTGSRSRVEKMVNGYIKHAGKPVDDIVDDGFATAVKKLGTLGCKVR 181
Query: 188 IMLEWDQKGKQGPTTPLPD 206
I+ P LPD
Sbjct: 182 IIH---------PDAVLPD 191
>gi|284165498|ref|YP_003403777.1| 30S ribosomal protein S3 [Haloterrigena turkmenica DSM 5511]
gi|284015153|gb|ADB61104.1| ribosomal protein S3 [Haloterrigena turkmenica DSM 5511]
Length = 317
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 116/207 (56%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD IH
Sbjct: 179 DVKIIP---------PGAELPDDFEIH 196
>gi|325958537|ref|YP_004290003.1| 30S ribosomal protein S3 [Methanobacterium sp. AL-21]
gi|325329969|gb|ADZ09031.1| ribosomal protein S3 [Methanobacterium sp. AL-21]
Length = 299
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L EL GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLENELERAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ + VE+ ++V+ L A + L G+ RR Y LR IM
Sbjct: 63 SITQNLKTGYGLENPQVEV--KEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTALRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ KF DGY+ G+P ++ V L+ GVLGI V+
Sbjct: 121 GAGAQGVEVTISGKIRGSRSACAKFSDGYIKKCGEPSIRFVRHGFATVQLKPGVLGINVR 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD V I
Sbjct: 181 IMP---------PDVVLPDKVDI 194
>gi|448323157|ref|ZP_21512621.1| 30S ribosomal protein S3P [Natronococcus amylolyticus DSM 10524]
gi|445600343|gb|ELY54356.1| 30S ribosomal protein S3P [Natronococcus amylolyticus DSM 10524]
Length = 313
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 121/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFEEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM+SGA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDSGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIE 228
VKI+ P LPD +H + V P + E
Sbjct: 179 DVKIIP---------PGAKLPDDFQVHDEMDPEEVVPDAVEANE 213
>gi|298674796|ref|YP_003726546.1| 30S ribosomal protein S3 [Methanohalobium evestigatum Z-7303]
gi|298287784|gb|ADI73750.1| ribosomal protein S3 [Methanohalobium evestigatum Z-7303]
Length = 307
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+ KFV DG A L+E ++L GY G+E+ TP+ T+I I A + V+G+ G+ IR
Sbjct: 4 ENKFVTDGYVKASLDEYFAKQLNRAGYGGMEINRTPMGTQITIYAEKPGMVIGKGGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V K + ++ ++ A++V L A A L + G R+A + +R IM
Sbjct: 64 KLTRDVDKLYNM--DNPQIDAQEVKTPELNAQMMATRLAASIERGWYFRKAGHNAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCE+I+SGKL RA+ K GY+ +G+PV++ +D + + G +G KV+
Sbjct: 122 GAGALGCEIIMSGKLTGPRARVEKLVRGYIKHAGKPVDDIVDEGFATAVKKLGTIGCKVR 181
Query: 188 IMLEWDQKGKQGPTTPLPD 206
I+ P LPD
Sbjct: 182 IIH---------PDAVLPD 191
>gi|224154183|ref|XP_002337443.1| predicted protein [Populus trichocarpa]
gi|222839282|gb|EEE77619.1| predicted protein [Populus trichocarpa]
Length = 73
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/56 (98%), Positives = 55/56 (98%)
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
KGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 2 KGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 57
>gi|110668735|ref|YP_658546.1| 30S ribosomal protein S3P [Haloquadratum walsbyi DSM 16790]
gi|385804235|ref|YP_005840635.1| 30S ribosomal protein S3 [Haloquadratum walsbyi C23]
gi|121689634|sp|Q18GF5.1|RS3_HALWD RecName: Full=30S ribosomal protein S3
gi|109626482|emb|CAJ52943.1| 30S ribosomal protein S3 [Haloquadratum walsbyi DSM 16790]
gi|339729727|emb|CCC41005.1| 30S ribosomal protein S3 [Haloquadratum walsbyi C23]
Length = 323
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 120/217 (55%), Gaps = 14/217 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEDRFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
I+ESGA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIIESGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAP 221
VKI+ P LPD IH ++V V P
Sbjct: 179 TVKIIP---------PGAELPDDFEIH---DDVDVEP 203
>gi|294496011|ref|YP_003542504.1| 30S ribosomal protein S3P [Methanohalophilus mahii DSM 5219]
gi|292667010|gb|ADE36859.1| SSU ribosomal protein S3P [Methanohalophilus mahii DSM 5219]
Length = 314
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 117/216 (54%), Gaps = 13/216 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A L+E +L+ GY G+E+ TP+ T+I++ + + V+G+ G+ IR
Sbjct: 4 EKKFVEDGFVKASLDEYFANQLSRAGYGGMEINRTPMGTQIVVYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V + + ++ ++ A++V L A A L + G R+A + +R IM
Sbjct: 64 KLTRDVGRLYNL--DNPQIDAQEVKRPELNAQMMATRLASSIERGWYFRKAGHNAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
SGA GCE+I+SGK+ R++ K +GY+ +G+PV++ +D + + G +G KV+
Sbjct: 122 NSGALGCEIILSGKVTGARSRVEKMVNGYIKHAGKPVDDIVDEGFAVAVKKLGTIGCKVR 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEEVY--VAP 221
I+ P LPD + + EE VAP
Sbjct: 182 IIH---------PGAVLPDSYHLKEIVEEAVAEVAP 208
>gi|448392355|ref|ZP_21567129.1| 30S ribosomal protein S3P [Haloterrigena salina JCM 13891]
gi|445664445|gb|ELZ17154.1| 30S ribosomal protein S3P [Haloterrigena salina JCM 13891]
Length = 318
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 115/207 (55%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD IH
Sbjct: 179 DVKIIP---------PGAELPDDFEIH 196
>gi|448311974|ref|ZP_21501727.1| 30S ribosomal protein S3P [Natronolimnobius innermongolicus JCM
12255]
gi|445603595|gb|ELY57557.1| 30S ribosomal protein S3P [Natronolimnobius innermongolicus JCM
12255]
Length = 315
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 116/207 (56%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEQFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD +H
Sbjct: 179 NVKIIP---------PGAELPDDFGVH 196
>gi|150401811|ref|YP_001325577.1| 30S ribosomal protein S3 [Methanococcus aeolicus Nankai-3]
gi|171460867|sp|A6UWU3.1|RS3_META3 RecName: Full=30S ribosomal protein S3
gi|150014514|gb|ABR56965.1| ribosomal protein S3 [Methanococcus aeolicus Nankai-3]
Length = 208
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +L GYS ++V+ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFIKENVMETLVDEYLKNKLPRAGYSHMDVKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + ++ N ++ +++ + L A A+ + L G+ RR + +R +M
Sbjct: 63 ELTETIATKYGV--NKPQIEVKQIESPDLDAGVVAQKIASSLERGMHFRRVAHSAIRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
GAKG VIVSGKL +R+++ K+ +GYM G+P E +D + L+ GV+G+ VK
Sbjct: 121 AQGAKGVVVIVSGKLTGERSRTEKYMEGYMKHCGEPSEELVDQCHKIAKLKLGVVGVTVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IM---------PPEITLPDEIVI 194
>gi|448298471|ref|ZP_21488500.1| 30S ribosomal protein S3P [Natronorubrum tibetense GA33]
gi|445591667|gb|ELY45868.1| 30S ribosomal protein S3P [Natronorubrum tibetense GA33]
Length = 323
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 121/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIE 228
VKI+ P LPD +H + + P + E
Sbjct: 179 DVKIIP---------PGAELPDDFGVHEDMDPAEIVPDAVEANE 213
>gi|336252434|ref|YP_004595541.1| 30S ribosomal protein S3 [Halopiger xanaduensis SH-6]
gi|335336423|gb|AEH35662.1| ribosomal protein S3 [Halopiger xanaduensis SH-6]
Length = 320
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 115/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G+EV TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEGQATAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 TVKIIP---------PGAELPD 191
>gi|170033439|ref|XP_001844585.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167874323|gb|EDS37706.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 258
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 101/202 (50%), Gaps = 59/202 (29%)
Query: 29 LAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYA 88
LA GY GVE VTP R+EIII TRTQN+LGEK IRELT++VQK
Sbjct: 101 LAAVGYFGVEFHVTPNRSEIII-TTRTQNMLGEKRHSIRELTAIVQK------------- 146
Query: 89 EKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAK 148
L+GGL+V ACY V+ ++SGAKG E ++
Sbjct: 147 --------------------LIGGLSVCGACYDVV--AVDSGAKGFEAVLF--------- 175
Query: 149 SMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLV 208
P NEY D+ RHVLLR VL I+VKI+L+W+ GK G PL V
Sbjct: 176 -------------DPCNEYFDTITRHVLLRLEVLEIQVKIILQWEPNGKIGQKEPLQHNV 222
Query: 209 TIHPLKEEV-YVAPATATSIEL 229
+ ++E+ Y P + +++EL
Sbjct: 223 LVVEQRDEIMYNTPRSMSALEL 244
>gi|409731018|ref|ZP_11272568.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
gi|448724776|ref|ZP_21707281.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
gi|445784985|gb|EMA35781.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
Length = 366
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 124/224 (55%), Gaps = 14/224 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G+E+ TP+ T+I++RA + V+G+ G+
Sbjct: 1 MATEQQFIEDGMQRTQIDEFFAEELGRAGYGGMELAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTELEERFDLDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA+G E+ ++GK+ R++ KF GY+ +G+P + +D +++ G +G+
Sbjct: 119 RIMDAGARGAEITLNGKVTGARSRDEKFNRGYIKHNGEPSKDIVDRGNGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIE 228
V+I+ P LPD I +E+V V+ IE
Sbjct: 179 TVRIIP---------PNAELPDDFRI---REDVDVSDLVPEDIE 210
>gi|219851113|ref|YP_002465545.1| 30S ribosomal protein S3 [Methanosphaerula palustris E1-9c]
gi|219545372|gb|ACL15822.1| ribosomal protein S3 [Methanosphaerula palustris E1-9c]
Length = 234
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 111/208 (53%), Gaps = 11/208 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFVA+GV + L R+L GY G+++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVAEGVRKVRVERFLLRDLKRAGYGGMDIARTPLGTQVTIYAEKPGIVIGKGGKVVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + +E+ ++V N A AE L L G R+A V+R +M
Sbjct: 64 QLTQDLATTYGIESPQIEV--QQVQNPNYNAQIMAERLANALERGWYFRKAGSNVVRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGA GCEV++SGKL RA+ KF +GY+ SG+P ++ + + G +G++VK
Sbjct: 122 ESGALGCEVVLSGKLTGARARVQKFTEGYIKHSGEPSITIVEKGYAIAIKKLGTIGVQVK 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKE 215
I+ P LPD I +K+
Sbjct: 182 IIP---------PDAKLPDQFEILDVKK 200
>gi|410670345|ref|YP_006922716.1| 30S ribosomal protein S3P [Methanolobus psychrophilus R15]
gi|409169473|gb|AFV23348.1| 30S ribosomal protein S3P [Methanolobus psychrophilus R15]
Length = 310
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 116/218 (53%), Gaps = 11/218 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A ++E ++L + GY G+E+ TP+ T+I I A + V+G+ G+ IR
Sbjct: 4 EKKFVQEGYVKASMDEYFAKQLNKAGYGGMELNRTPMGTQITIYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + + ++ ++ A++V L A A L + G R+A + +R IM
Sbjct: 64 KLTRDIDRMYDI--DNPQIDAQEVRRPELNAQMMATRLASSIERGWYFRKAGHNTIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCE+++SGKL R++ K GY+ +G+PV++ +D + + G LG KV+
Sbjct: 122 NAGALGCEIVISGKLTGARSRVEKIVQGYIKHAGKPVDDIVDEGFAVAVKKLGTLGCKVR 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATAT 225
I+ P LPD + + EE V A +
Sbjct: 182 IIP---------PGAVLPDSFHLKDIAEEPKVEAAVVS 210
>gi|116755010|ref|YP_844128.1| 30S ribosomal protein S3P [Methanosaeta thermophila PT]
gi|121694870|sp|A0B9W4.1|RS3_METTP RecName: Full=30S ribosomal protein S3
gi|116666461|gb|ABK15488.1| SSU ribosomal protein S3P [Methanosaeta thermophila PT]
Length = 276
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 112/204 (54%), Gaps = 11/204 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A ++E L +EL GY G+ + TP+ T+I + A + V+G+ G+ IR
Sbjct: 4 EKKFVQEGFTKALVDEYLAKELDRAGYGGMVMNRTPMGTQITVYAEKPGMVIGKGGKLIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT +++RF+ ++ ++ + V L A A L L G R+A +LR +M
Sbjct: 64 KLTRDLERRFRL--DNPQIDVQDVGKSDLNARVVANRLASSLEHGWYFRKAGQSMLRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+SGA GCE+++SGKL R++ KF GY+ SG+P E +D+ + + G +G +V+
Sbjct: 122 DSGALGCEIVISGKLTGPRSRVEKFLAGYIKHSGKPAEEIVDTGYAVAVKKLGAIGCQVR 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIH 211
I+ P LPD I+
Sbjct: 182 IVP---------PGAVLPDDFQIN 196
>gi|433638927|ref|YP_007284687.1| ribosomal protein S3, eukaryotic/archaeal type [Halovivax ruber
XH-70]
gi|433290731|gb|AGB16554.1| ribosomal protein S3, eukaryotic/archaeal type [Halovivax ruber
XH-70]
Length = 314
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 115/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLRRSQIDEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P +E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPADEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 DVKIIP---------PGAELPD 191
>gi|448377812|ref|ZP_21560508.1| 30S ribosomal protein S3P [Halovivax asiaticus JCM 14624]
gi|445655756|gb|ELZ08601.1| 30S ribosomal protein S3P [Halovivax asiaticus JCM 14624]
Length = 314
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLRRSQIDEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P +E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPADEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 DVKIIP---------PGAELPD 191
>gi|435852132|ref|YP_007313718.1| ribosomal protein S3, eukaryotic/archaeal type
[Methanomethylovorans hollandica DSM 15978]
gi|433662762|gb|AGB50188.1| ribosomal protein S3, eukaryotic/archaeal type
[Methanomethylovorans hollandica DSM 15978]
Length = 304
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 103/182 (56%), Gaps = 2/182 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A L+E ++L GY G+EV TP+ T+I + A + V+G+ G+ IR
Sbjct: 4 EKKFVHEGYVKASLDEYFAKQLNRAGYGGMEVNRTPMGTQITVYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + + ++ ++ A++V L A A L + G R+A + +R IM
Sbjct: 64 KLTRDIDRMYDL--DNPQIDAQEVRRPELNAQMMATRLASSIERGWYFRKAGHNAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCE+++SGKL R++S K GY+ +G+P + +D + + G LG KV+
Sbjct: 122 NAGALGCEIVISGKLTGSRSRSEKIVQGYIKHAGKPAEDIVDEGFAVAVKKLGTLGCKVR 181
Query: 188 IM 189
I+
Sbjct: 182 II 183
>gi|15790638|ref|NP_280462.1| 30S ribosomal protein S3 [Halobacterium sp. NRC-1]
gi|169236377|ref|YP_001689577.1| 30S ribosomal protein S3P [Halobacterium salinarum R1]
gi|21264507|sp|P15009.3|RS3_HALSA RecName: Full=30S ribosomal protein S3; AltName: Full=HHAS3;
AltName: Full=HS4
gi|2425182|dbj|BAA22276.1| ribosomal protein S3 [Halobacterium salinarum]
gi|10581165|gb|AAG19942.1| 30S ribosomal protein S3P [Halobacterium sp. NRC-1]
gi|167727443|emb|CAP14231.1| 30S ribosomal protein S3 [Halobacterium salinarum R1]
Length = 302
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 113/207 (54%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ G+ ++++E ELA GY G+E+ TP+ +I+++A + V+G+ G+
Sbjct: 1 MADELEFIEQGLQRSQIDEFFAEELARAGYGGMELAPTPMGMQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKITTQLEERFDLEDPQIDV--QEVEEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R + KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGNRGRVEKFNRGYIKHNGEPAEEIVDHGKGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD I
Sbjct: 179 NVKIIP---------PNAELPDDFEIQ 196
>gi|150402573|ref|YP_001329867.1| 30S ribosomal protein S3P [Methanococcus maripaludis C7]
gi|189045018|sp|A6VGZ0.1|RS3_METM7 RecName: Full=30S ribosomal protein S3
gi|150033603|gb|ABR65716.1| ribosomal protein S3 [Methanococcus maripaludis C7]
Length = 211
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + + N+ ++ ++V + L + L G+ R+ + +R +M
Sbjct: 63 ELTETLSTEYAV--NNPQIEVKQVESPDLDPAIVGHKIASSLERGMHFRKTAHSAIRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
SGAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ GV+G+ VK
Sbjct: 121 GSGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD +TI
Sbjct: 181 IM---------KPDVSLPDEITI 194
>gi|448578195|ref|ZP_21643630.1| 30S ribosomal protein S3P [Haloferax larsenii JCM 13917]
gi|445726736|gb|ELZ78352.1| 30S ribosomal protein S3P [Haloferax larsenii JCM 13917]
Length = 298
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQKSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIM 189
VKI+
Sbjct: 179 TVKII 183
>gi|448592785|ref|ZP_21651832.1| 30S ribosomal protein S3P [Haloferax elongans ATCC BAA-1513]
gi|445730811|gb|ELZ82398.1| 30S ribosomal protein S3P [Haloferax elongans ATCC BAA-1513]
Length = 300
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQKSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIM 189
VKI+
Sbjct: 179 TVKII 183
>gi|330508492|ref|YP_004384920.1| 30S ribosomal protein S3P [Methanosaeta concilii GP6]
gi|328929300|gb|AEB69102.1| ribosomal protein S3P [Methanosaeta concilii GP6]
Length = 278
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 108/185 (58%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S ++KFVA+G+ A +NE L EL GY G+++ TP+ T+I + A + V+G+ G+
Sbjct: 1 MSVEKKFVAEGITKALVNEYLADELERAGYGGMQMNRTPMGTQITVYAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T + +RF ++ ++ + V L A L L G R+A ++R
Sbjct: 61 LIRKITRDLDRRFHL--DNPQIDVQDVGRGDLNGRVVANRLASSLERGWYFRKAGQSMMR 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
+M++GA GCE+++SGKL R+++ KF GY+ SG+P + +D + + GV+G
Sbjct: 119 RVMDAGALGCEIVISGKLTGPRSRTEKFIAGYIKHSGKPAIDLVDRGYSVAVKKLGVIGC 178
Query: 185 KVKIM 189
+V+I+
Sbjct: 179 QVRII 183
>gi|159905652|ref|YP_001549314.1| 30S ribosomal protein S3P [Methanococcus maripaludis C6]
gi|226697730|sp|A9A9Q9.1|RS3_METM6 RecName: Full=30S ribosomal protein S3
gi|159887145|gb|ABX02082.1| ribosomal protein S3 [Methanococcus maripaludis C6]
Length = 211
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + + N+ ++ ++V + L + L G+ R+ + +R +M
Sbjct: 63 ELTETLSTEYAV--NNPQIEVKQVESPDLDPAIVGHKIASSLERGMHFRKTAHSAIRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
SGAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ GV+G+ VK
Sbjct: 121 GSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD +TI
Sbjct: 181 IM---------KPDVSLPDEITI 194
>gi|313125796|ref|YP_004036066.1| 30S ribosomal protein S3 [Halogeometricum borinquense DSM 11551]
gi|448285635|ref|ZP_21476876.1| 30S ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
gi|312292161|gb|ADQ66621.1| SSU ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
gi|445576271|gb|ELY30728.1| 30S ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
Length = 310
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 119/217 (54%), Gaps = 14/217 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTKALETRFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAP 221
VKI+ P LPD I +E+ V P
Sbjct: 179 TVKIIP---------PGAKLPDDFEI---EEDADVEP 203
>gi|448399316|ref|ZP_21570618.1| 30S ribosomal protein S3P [Haloterrigena limicola JCM 13563]
gi|445669223|gb|ELZ21836.1| 30S ribosomal protein S3P [Haloterrigena limicola JCM 13563]
Length = 310
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 115/207 (55%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD ++
Sbjct: 179 DVKIIP---------PGAELPDDFEVN 196
>gi|399577352|ref|ZP_10771105.1| rps3 protein [Halogranum salarium B-1]
gi|399237735|gb|EJN58666.1| rps3 protein [Halogranum salarium B-1]
Length = 309
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 115/206 (55%), Gaps = 11/206 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQKSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +Q+RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITRELQERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E++++GK+ R++ KF GY+ +G+P + +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLAGKVTGARSRIEKFNRGYIKHNGEPADTVVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI 210
VKI+ P LPD I
Sbjct: 179 TVKIIP---------PGAQLPDDFAI 195
>gi|333987673|ref|YP_004520280.1| 30S ribosomal protein S3 [Methanobacterium sp. SWAN-1]
gi|333825817|gb|AEG18479.1| ribosomal protein S3 [Methanobacterium sp. SWAN-1]
Length = 315
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 11/207 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +L GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLETQLERAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ + EN ++ ++V L A + L G+ RR Y LR IM
Sbjct: 63 SITQNLKNDYGL-ENP-QVEVKEVEVPELNPKIMAHKIANMLQRGMHFRRVAYTALRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ KF DGY+ G+P N+++ V L+ GVLGI V+
Sbjct: 121 GAGAQGVEVTISGKIRGSRSACSKFTDGYIKKCGEPANKHVRKGFATVQLKPGVLGIYVR 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLK 214
IM P LPD V I ++
Sbjct: 181 IMP---------PGILLPDKVDIKDIE 198
>gi|354610531|ref|ZP_09028487.1| ribosomal protein S3 [Halobacterium sp. DL1]
gi|353195351|gb|EHB60853.1| ribosomal protein S3 [Halobacterium sp. DL1]
Length = 323
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 114/207 (55%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ G+ ++++E ELA GY G+E+ TP+ +I+++A + V+G+ G+
Sbjct: 1 MADEMQFIEQGLQRSQIDEFFATELARAGYGGMELAPTPMGMQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTQLEERFDLEDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R + KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGNRGRVEKFNRGYIKHNGEPAEEIVDHGKGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD I
Sbjct: 179 SVKIIP---------PNAKLPDDFEIQ 196
>gi|448309700|ref|ZP_21499556.1| 30S ribosomal protein S3P [Natronorubrum bangense JCM 10635]
gi|445589557|gb|ELY43787.1| 30S ribosomal protein S3P [Natronorubrum bangense JCM 10635]
Length = 308
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 120/224 (53%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIE 228
VKI+ P LPD ++ + V P + E
Sbjct: 179 NVKIIP---------PGAKLPDDFAVYEDMDPEEVVPDAVEANE 213
>gi|322372162|ref|ZP_08046703.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253]
gi|320548171|gb|EFW89844.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253]
Length = 320
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 113/206 (54%), Gaps = 11/206 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T + +RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITRELGERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM+SGA G E+++SGK+ R++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RIMDSGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQTIVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTI 210
VKI+ P LPD I
Sbjct: 179 DVKIIP---------PGADLPDDFQI 195
>gi|448345591|ref|ZP_21534480.1| 30S ribosomal protein S3P [Natrinema altunense JCM 12890]
gi|445633524|gb|ELY86711.1| 30S ribosomal protein S3P [Natrinema altunense JCM 12890]
Length = 312
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 112/202 (55%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 DVKIIP---------PGAELPD 191
>gi|397773837|ref|YP_006541383.1| ribosomal protein S3 [Natrinema sp. J7-2]
gi|448341384|ref|ZP_21530345.1| 30S ribosomal protein S3P [Natrinema gari JCM 14663]
gi|397682930|gb|AFO57307.1| ribosomal protein S3 [Natrinema sp. J7-2]
gi|445628066|gb|ELY81377.1| 30S ribosomal protein S3P [Natrinema gari JCM 14663]
Length = 312
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 112/202 (55%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 DVKIIP---------PGAELPD 191
>gi|448338128|ref|ZP_21527180.1| 30S ribosomal protein S3P [Natrinema pallidum DSM 3751]
gi|445623303|gb|ELY76725.1| 30S ribosomal protein S3P [Natrinema pallidum DSM 3751]
Length = 314
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 112/202 (55%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 DVKIIP---------PGAELPD 191
>gi|119719404|ref|YP_919899.1| ribosomal protein S3 [Thermofilum pendens Hrk 5]
gi|119524524|gb|ABL77896.1| SSU ribosomal protein S3P [Thermofilum pendens Hrk 5]
Length = 187
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 98/169 (57%), Gaps = 2/169 (1%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
LNE L R+L Y + TP+ T++I+ A V+G KG I+ + V+++ F
Sbjct: 3 LNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKAIAEVLEREFGIE 62
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+++ +V N+ L A A + L+ G+ RRA L IM +GA+G E+++SG
Sbjct: 63 NPQIDVV--EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISG 120
Query: 141 KLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
KL +QR ++ KF GY+ SG+P E +D A+ HVLL+ G+ G+KV+IM
Sbjct: 121 KLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRIM 169
>gi|448730383|ref|ZP_21712691.1| 30S ribosomal protein S3P [Halococcus saccharolyticus DSM 5350]
gi|445793551|gb|EMA44123.1| 30S ribosomal protein S3P [Halococcus saccharolyticus DSM 5350]
Length = 372
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 114/207 (55%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+ ++ F+ DG+ +++E EL GY G+E+ TP+ T+I++RA + V+G+ G+
Sbjct: 1 MGSEQTFIEDGMQRTQIDEFFGDELERAGYGGMELAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTQLEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA+G E+ ++GK+ R+++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RIMDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPAQSIVDRGDGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD I
Sbjct: 179 TVKIIP---------PDAELPDDFRIQ 196
>gi|448302872|ref|ZP_21492822.1| 30S ribosomal protein S3P [Natronorubrum sulfidifaciens JCM 14089]
gi|445593879|gb|ELY48046.1| 30S ribosomal protein S3P [Natronorubrum sulfidifaciens JCM 14089]
Length = 313
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 119/224 (53%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ +F + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEDKFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSIE 228
VKI+ P LPD ++ + V P + E
Sbjct: 179 NVKIIP---------PGAELPDDFAVYEDMDPEEVVPDAVEANE 213
>gi|448315118|ref|ZP_21504771.1| 30S ribosomal protein S3P [Natronococcus jeotgali DSM 18795]
gi|445612377|gb|ELY66103.1| 30S ribosomal protein S3P [Natronococcus jeotgali DSM 18795]
Length = 295
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 115/207 (55%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFEEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM+SGA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDSGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD I+
Sbjct: 179 DVKIIP---------PGAELPDDFQIN 196
>gi|15897617|ref|NP_342222.1| 30S ribosomal protein S3 [Sulfolobus solfataricus P2]
gi|284174942|ref|ZP_06388911.1| 30S ribosomal protein S3P [Sulfolobus solfataricus 98/2]
gi|384434231|ref|YP_005643589.1| 30S ribosomal protein S3 [Sulfolobus solfataricus 98/2]
gi|11134364|sp|Q9UXA0.1|RS3_SULSO RecName: Full=30S ribosomal protein S3
gi|6015765|emb|CAB57592.1| ribosomal protein S3 (HMAS3) [Sulfolobus solfataricus P2]
gi|13813882|gb|AAK41012.1| SSU ribosomal protein S3AB (rps3AB) [Sulfolobus solfataricus P2]
gi|261602385|gb|ACX91988.1| ribosomal protein S3 [Sulfolobus solfataricus 98/2]
Length = 229
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 6/200 (3%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
KR F+ + +++E L ++ Y+GVEV TP+ T +II A R ++G GR I+
Sbjct: 5 KRYFLEKSIVKVKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L + +K F EN ++ V N L A A L L G RRA + +R IM
Sbjct: 65 QLAQIFEKVFGL-ENP-QITITNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G E+I+SGKL +RA+ K K+G + SGQ + + ID A+ +L+ G+ G++V
Sbjct: 123 NAGALGAEIIISGKLTTERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGIFGVEVV 182
Query: 188 IM----LEWDQKGKQGPTTP 203
I +E K+ P+ P
Sbjct: 183 ITKPLKIEDKINLKESPSVP 202
>gi|448611741|ref|ZP_21662171.1| 30S ribosomal protein S3P [Haloferax mucosum ATCC BAA-1512]
gi|445742502|gb|ELZ93996.1| 30S ribosomal protein S3P [Haloferax mucosum ATCC BAA-1512]
Length = 299
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 TVKIIP---------PGAKLPD 191
>gi|386001179|ref|YP_005919478.1| 30S ribosomal protein S3 [Methanosaeta harundinacea 6Ac]
gi|357209235|gb|AET63855.1| 30S ribosomal protein S3P [Methanosaeta harundinacea 6Ac]
Length = 302
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 103/182 (56%), Gaps = 2/182 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E L++EL+ GY G+ + TP+ +I + A + V+G+ G+ IR
Sbjct: 4 EKKFVEDGFTKALVHEYLSKELSRAGYGGMTMNRTPMGIQITVYAEKPGMVIGKGGKLIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + F+ ++ ++ + V L A A L L G R+A LR +M
Sbjct: 64 KLTRDLDRNFRL--DNPQIDVQDVGKAELNAQVVANRLASSLERGWYFRKAGQTTLRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGA GCE+I+SGKL R++ KF GY+ SG+P E +D + + G +G +V+
Sbjct: 122 ESGALGCEIILSGKLTGPRSRVEKFLSGYVKHSGKPSQEIVDHGYAVAVKKLGTIGCQVR 181
Query: 188 IM 189
I+
Sbjct: 182 IV 183
>gi|389848011|ref|YP_006350250.1| 30S ribosomal protein S3 [Haloferax mediterranei ATCC 33500]
gi|448618108|ref|ZP_21666453.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
gi|388245317|gb|AFK20263.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
gi|445747663|gb|ELZ99118.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
Length = 300
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 TVKIIP---------PGAQLPD 191
>gi|448583476|ref|ZP_21646832.1| 30S ribosomal protein S3P [Haloferax gibbonsii ATCC 33959]
gi|445729705|gb|ELZ81300.1| 30S ribosomal protein S3P [Haloferax gibbonsii ATCC 33959]
Length = 302
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 TVKIIP---------PGAKLPD 191
>gi|448565521|ref|ZP_21636388.1| 30S ribosomal protein S3P [Haloferax prahovense DSM 18310]
gi|445715265|gb|ELZ67021.1| 30S ribosomal protein S3P [Haloferax prahovense DSM 18310]
Length = 303
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 TVKIIP---------PGAKLPD 191
>gi|379994267|gb|AFD22760.1| 40S ribosomal protein S3, partial [Collodictyon triciliatum]
Length = 100
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 57/73 (78%)
Query: 138 VSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGK 197
VSGKLRAQRAK MKF+DGYMI SG P Y+DSAVRHV++RQGVLG++V IML WD G+
Sbjct: 4 VSGKLRAQRAKVMKFRDGYMIKSGNPTKVYVDSAVRHVMMRQGVLGVRVSIMLPWDPTGR 63
Query: 198 QGPTTPLPDLVTI 210
G P D++TI
Sbjct: 64 NGVKIPQADVITI 76
>gi|52550170|gb|AAU84019.1| SSU ribosomal protein S3p [uncultured archaeon GZfos35D7]
Length = 359
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV G+ A ++E +++L GY+G+++ TP+ T+I I A + V+G+ G+ +R
Sbjct: 4 ERKFVQQGLNRARMSEYFSKQLERAGYAGMQINRTPMGTQITIFAEKPGMVIGKGGKSVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
LTS + + +++ V L A A + L G R+A + LR IM
Sbjct: 64 NLTSDLNNFYDLDNPQIDVQGVGVPE--LNAQLMASRIASALERGWYFRKAAHSTLRRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GC +++SGKL R++ K +GY++ +G+P E + + + + G +G K++
Sbjct: 122 GAGALGCRIVLSGKLTGPRSRIEKIVEGYIVHAGKPAEEIVHTGFATAVRKLGTIGCKIQ 181
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
I+L P T LPD+ +
Sbjct: 182 IVL---------PDTTLPDVFNL 195
>gi|45358967|ref|NP_988524.1| 30S ribosomal protein S3P [Methanococcus maripaludis S2]
gi|340624714|ref|YP_004743167.1| 30S ribosomal protein S3 [Methanococcus maripaludis X1]
gi|61215571|sp|Q6LXE7.1|RS3_METMP RecName: Full=30S ribosomal protein S3
gi|45047833|emb|CAF30960.1| SSU ribosomal protein S3P [Methanococcus maripaludis S2]
gi|339904982|gb|AEK20424.1| 30S ribosomal protein S3P [Methanococcus maripaludis X1]
Length = 211
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++ + TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + + +E+ ++V N L + L G+ R+ + +R +M
Sbjct: 63 ELTETLATEYSVKNPQIEV--KQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
SGAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ G++G+ VK
Sbjct: 121 GSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IMR---------PDVSLPDEIVI 194
>gi|424812835|ref|ZP_18238075.1| ribosomal protein S3, eukaryotic/archaeal type [Candidatus
Nanosalinarum sp. J07AB56]
gi|339757057|gb|EGQ40640.1| ribosomal protein S3, eukaryotic/archaeal type [Candidatus
Nanosalinarum sp. J07AB56]
Length = 366
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 6/188 (3%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QI ++++FV G+ L++ L +EL GY+G + TP T+I+I A + ++G G
Sbjct: 17 QIVQEKQFVQQGIRRVNLDDFLAKELEGSGYAGSTIERTPTSTKIVITAEKPGLIIGRGG 76
Query: 64 RRIRELTSVVQKRFKFPENSVELY--AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
RIRELTS V+ F F + +E+ E +N + A AE L G + +R Y
Sbjct: 77 SRIRELTSDVEDEFGFEDPQIEVNEIEEPDSNAQVVANNMAEWLEK----GGSAKRVGYT 132
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
LR + E+G G ++ VSGKL R ++ KF GY+ G +E +D R + G
Sbjct: 133 YLRRVRETGVIGAQIEVSGKLSGNRGRTEKFSFGYVKRCGDTADEQVDRGYRLARTKPGA 192
Query: 182 LGIKVKIM 189
+G+KV+IM
Sbjct: 193 IGVKVRIM 200
>gi|448545980|ref|ZP_21626307.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-646]
gi|448548054|ref|ZP_21627398.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-645]
gi|448557077|ref|ZP_21632512.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-644]
gi|445703326|gb|ELZ55257.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-646]
gi|445714756|gb|ELZ66514.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-645]
gi|445714946|gb|ELZ66703.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-644]
Length = 302
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIM 189
VKI+
Sbjct: 179 TVKII 183
>gi|294880038|ref|XP_002768878.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239871826|gb|EER01596.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 106
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 57/60 (95%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
>gi|433420031|ref|ZP_20405417.1| 30S ribosomal protein S3P [Haloferax sp. BAB2207]
gi|432199288|gb|ELK55479.1| 30S ribosomal protein S3P [Haloferax sp. BAB2207]
Length = 303
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIM 189
VKI+
Sbjct: 179 TVKII 183
>gi|448569076|ref|ZP_21638488.1| 30S ribosomal protein S3P [Haloferax lucentense DSM 14919]
gi|448600505|ref|ZP_21656001.1| 30S ribosomal protein S3P [Haloferax alexandrinus JCM 10717]
gi|445725226|gb|ELZ76851.1| 30S ribosomal protein S3P [Haloferax lucentense DSM 14919]
gi|445735222|gb|ELZ86774.1| 30S ribosomal protein S3P [Haloferax alexandrinus JCM 10717]
Length = 303
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIM 189
VKI+
Sbjct: 179 TVKII 183
>gi|292656679|ref|YP_003536576.1| 30S ribosomal protein S3 [Haloferax volcanii DS2]
gi|448290683|ref|ZP_21481829.1| 30S ribosomal protein S3P [Haloferax volcanii DS2]
gi|291370935|gb|ADE03162.1| ribosomal protein S3 [Haloferax volcanii DS2]
gi|445578054|gb|ELY32469.1| 30S ribosomal protein S3P [Haloferax volcanii DS2]
Length = 304
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIM 189
VKI+
Sbjct: 179 TVKII 183
>gi|448606201|ref|ZP_21658780.1| 30S ribosomal protein S3P [Haloferax sulfurifontis ATCC BAA-897]
gi|445739618|gb|ELZ91125.1| 30S ribosomal protein S3P [Haloferax sulfurifontis ATCC BAA-897]
Length = 302
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIM 189
VKI+
Sbjct: 179 TVKII 183
>gi|448623086|ref|ZP_21669735.1| 30S ribosomal protein S3P [Haloferax denitrificans ATCC 35960]
gi|445753594|gb|EMA05011.1| 30S ribosomal protein S3P [Haloferax denitrificans ATCC 35960]
Length = 303
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIM 189
VKI+
Sbjct: 179 TVKII 183
>gi|448386095|ref|ZP_21564303.1| 30S ribosomal protein S3P [Haloterrigena thermotolerans DSM 11522]
gi|445655993|gb|ELZ08835.1| 30S ribosomal protein S3P [Haloterrigena thermotolerans DSM 11522]
Length = 312
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 112/202 (55%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTTLEERFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAETVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 DVKIIP---------PGAELPD 191
>gi|448329365|ref|ZP_21518665.1| 30S ribosomal protein S3P [Natrinema versiforme JCM 10478]
gi|445614104|gb|ELY67785.1| 30S ribosomal protein S3P [Natrinema versiforme JCM 10478]
Length = 322
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 112/202 (55%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAETVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 DVKIIP---------PGAELPD 191
>gi|433590200|ref|YP_007279696.1| ribosomal protein S3, eukaryotic/archaeal type [Natrinema
pellirubrum DSM 15624]
gi|448332394|ref|ZP_21521638.1| 30S ribosomal protein S3P [Natrinema pellirubrum DSM 15624]
gi|433304980|gb|AGB30792.1| ribosomal protein S3, eukaryotic/archaeal type [Natrinema
pellirubrum DSM 15624]
gi|445627498|gb|ELY80822.1| 30S ribosomal protein S3P [Natrinema pellirubrum DSM 15624]
Length = 316
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 112/202 (55%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTTLEERFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAETVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 DVKIIP---------PGAELPD 191
>gi|448735129|ref|ZP_21717346.1| 30S ribosomal protein S3P [Halococcus salifodinae DSM 8989]
gi|445798742|gb|EMA49133.1| 30S ribosomal protein S3P [Halococcus salifodinae DSM 8989]
Length = 372
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 114/207 (55%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+ ++ F+ DG+ +++E EL GY G+++ TP+ T+I++RA + V+G+ G+
Sbjct: 1 MGSEQTFIEDGMQRTQIDEFFGDELERAGYGGMDLAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTQLEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA+G E+ ++GK+ R+++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RIMDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPAQSIVDRGDGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
V+I+ P LPD I
Sbjct: 179 TVRIIP---------PDAELPDDFRIQ 196
>gi|296242591|ref|YP_003650078.1| 30S ribosomal protein S3 [Thermosphaera aggregans DSM 11486]
gi|296095175|gb|ADG91126.1| SSU ribosomal protein S3P [Thermosphaera aggregans DSM 11486]
Length = 229
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 109/209 (52%), Gaps = 11/209 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K F++ G+ ++E L + GY+GVEV TP ++I A ++G G I+
Sbjct: 7 KSYFLSYGLKKLMIDEFLANYFKDAGYAGVEVFRTPTGHRVVIYAEYPGRLIGRGGSVIK 66
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT+++Q RF +V + V + L A A + L + RR G+L+ IM
Sbjct: 67 KLTTILQTRFGL--ENVNITVSPVMDPDLNARVVAFRIVRALEKEIPFRRVMMGMLKRIM 124
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
++GA G E+I+SGKLR +RA K + G + +G+PV ID AV LL+ G+ G++V
Sbjct: 125 DAGAVGAEIIISGKLRGERATYEKMRVGKIYKAGEPVEYIIDRAVARALLKPGIYGVEVL 184
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
I+ P LPD V I P+K E
Sbjct: 185 IV---------KPGIKLPDHVEIKPVKPE 204
>gi|448415413|ref|ZP_21578213.1| 30S ribosomal protein S3P [Halosarcina pallida JCM 14848]
gi|445681071|gb|ELZ33512.1| 30S ribosomal protein S3P [Halosarcina pallida JCM 14848]
Length = 343
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 113/207 (54%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTKELENRFDLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+I++GK+ R++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIILAGKVTGARSRVEKFNRGYIKHNGEPAQSIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLEWDQKGKQGPTTPLPDLVTIH 211
VKI+ P LPD I
Sbjct: 179 NVKIIP---------PGAKLPDDFEIE 196
>gi|9967236|dbj|BAB12320.1| hypothetical protein [Macaca fascicularis]
Length = 83
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
+II ATRT+N+LGEKGR IRELT+VVQK F FPE SVELYA+KV RG IAQAESLRY
Sbjct: 1 MIILATRTENILGEKGRWIRELTAVVQKTFGFPEGSVELYADKVATRGR-DIAQAESLRY 59
Query: 108 KLLGGLAVRRA 118
K LGGLAVRRA
Sbjct: 60 KFLGGLAVRRA 70
>gi|70606406|ref|YP_255276.1| 30S ribosomal protein S3 [Sulfolobus acidocaldarius DSM 639]
gi|449066618|ref|YP_007433700.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius N8]
gi|449068892|ref|YP_007435973.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius Ron12/I]
gi|76363394|sp|Q4JB46.1|RS3_SULAC RecName: Full=30S ribosomal protein S3
gi|68567054|gb|AAY79983.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius DSM 639]
gi|449035126|gb|AGE70552.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius N8]
gi|449037400|gb|AGE72825.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius Ron12/I]
Length = 231
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 99/181 (54%), Gaps = 2/181 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
KR F+ ++E L ++ Y+GVE+ TP+ T +II A R ++G+ G+ I+
Sbjct: 5 KRHFLQKAAIKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L V++K F + + A N L A A L L G RRA + +R IM
Sbjct: 65 QLAQVLEKFFGLENPQITVTA--AENPELNARVMAFRLAIALEKGYHFRRAAFITIRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
SGA G EVIVSGKL ++RAK K K+G + SGQ + + ID A+ +L+ GV G++V
Sbjct: 123 SSGAVGAEVIVSGKLTSERAKYEKLKEGTVYKSGQQLEKIIDRAIGIAMLKPGVYGVEVV 182
Query: 188 I 188
I
Sbjct: 183 I 183
>gi|156937383|ref|YP_001435179.1| 30S ribosomal protein S3 [Ignicoccus hospitalis KIN4/I]
gi|172044464|sp|A8AA20.1|RS3_IGNH4 RecName: Full=30S ribosomal protein S3
gi|156566367|gb|ABU81772.1| SSU ribosomal protein S3P [Ignicoccus hospitalis KIN4/I]
Length = 241
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 101/181 (55%), Gaps = 2/181 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + +++E L + GYS VE++ TP+ T +II A R+ ++G +G+ I+
Sbjct: 9 KKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAIIGRRGQTIK 68
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
++T V+++ F P V + KV L A A L L G RRA Y LR IM
Sbjct: 69 QITKVLEEWFGIPNPQVTVV--KVEEPELDARVMAFRLANALQRGFHFRRAAYTTLRRIM 126
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G +V VSGKLR +RA+ K+ G + SG V D A+ HVLL+ GV G++V
Sbjct: 127 GAGAIGAQVKVSGKLRGERARFEKYIAGKVYKSGNQVVRLTDRAIAHVLLKVGVEGVEVI 186
Query: 188 I 188
I
Sbjct: 187 I 187
>gi|150399466|ref|YP_001323233.1| 30S ribosomal protein S3P [Methanococcus vannielii SB]
gi|171460840|sp|A6UQ49.1|RS3_METVS RecName: Full=30S ribosomal protein S3
gi|150012169|gb|ABR54621.1| ribosomal protein S3 [Methanococcus vannielii SB]
Length = 211
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+A+ V ++E +L GYS +E++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFIAENVSETLIDEYFKGKLVRAGYSHLELKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + + +K +E+ + + L + L G+ R+ + +R +M
Sbjct: 63 ELTDTLTEVYKVENPQIEV--KPLETPDLDPAIVGHKIAASLEKGMHFRKTAHSAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG +I+SGKL +R+++ KF DGYM G+P E + + + L+ G++G+ VK
Sbjct: 121 AAGAKGVAIIISGKLSGERSRTEKFMDGYMKHCGEPAEELVIKSHQLAKLKLGIVGVTVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IMR---------PDVSLPDEIII 194
>gi|429217541|ref|YP_007175531.1| ribosomal protein S3, eukaryotic/archaeal type [Caldisphaera
lagunensis DSM 15908]
gi|429134070|gb|AFZ71082.1| ribosomal protein S3, eukaryotic/archaeal type [Caldisphaera
lagunensis DSM 15908]
Length = 247
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 100/182 (54%), Gaps = 2/182 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + A+++E L + GYSGV + + + T I I A R ++G KG IR
Sbjct: 5 KKYFLDQAMLRAKIDEYLAQNFYTAGYSGVHIIQSGLGTRIHIYAERPALIIGRKGATIR 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
L V QK F +V++ + +N L A QA + L G RR LR I+
Sbjct: 65 RLQGVFQKVFGL--ENVQVTVSQPDNTELDARIQAFRVARSLEMGYHFRRVAMATLRRII 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
E+GA G E+++SGKL +RAK K + G +I +G V++Y+D AV H L QG+ G+++
Sbjct: 123 EAGAIGAEIVISGKLTNERAKFEKLQMGKVIKTGDIVDQYVDKAVAHAKLPQGIYGVRII 182
Query: 188 IM 189
I+
Sbjct: 183 IV 184
>gi|336121751|ref|YP_004576526.1| 30S ribosomal protein S3 [Methanothermococcus okinawensis IH1]
gi|334856272|gb|AEH06748.1| ribosomal protein S3 [Methanothermococcus okinawensis IH1]
Length = 219
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E L +L GYS ++++ TPV T I + A + V+G KGR ++
Sbjct: 3 ERAFVKENVVETLVDEYLKNKLPRAGYSHMDIKKTPVGTRITVFAEKPGFVIGRKGRMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + ++ +E+ +++ N L A+ + L G+ RR + +R +M
Sbjct: 63 ELTETIANKYGVENPQIEV--KQIQNPDLDPEVVAQKIASSLERGMHFRRVAHSAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG +I+SGKL +R+++ KF +GYM G+P + A + L+ G++G+ VK
Sbjct: 121 GAGAKGIVIIISGKLTGERSRTEKFMEGYMKHCGEPSEVLVKKAHKLAKLKLGIIGVTVK 180
Query: 188 IMLEWDQKGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IM---------PPEIVLPDEIVI 194
>gi|227827697|ref|YP_002829477.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.14.25]
gi|227830393|ref|YP_002832173.1| 30S ribosomal protein S3 [Sulfolobus islandicus L.S.2.15]
gi|229579212|ref|YP_002837610.1| 30S ribosomal protein S3 [Sulfolobus islandicus Y.G.57.14]
gi|229582036|ref|YP_002840435.1| 30S ribosomal protein S3 [Sulfolobus islandicus Y.N.15.51]
gi|229584901|ref|YP_002843403.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.16.27]
gi|238619868|ref|YP_002914694.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.16.4]
gi|284997900|ref|YP_003419667.1| 30S ribosomal protein S3 [Sulfolobus islandicus L.D.8.5]
gi|385773369|ref|YP_005645935.1| 30S ribosomal protein S3 [Sulfolobus islandicus HVE10/4]
gi|385776007|ref|YP_005648575.1| 30S ribosomal protein S3 [Sulfolobus islandicus REY15A]
gi|227456841|gb|ACP35528.1| ribosomal protein S3 [Sulfolobus islandicus L.S.2.15]
gi|227459493|gb|ACP38179.1| ribosomal protein S3 [Sulfolobus islandicus M.14.25]
gi|228009926|gb|ACP45688.1| ribosomal protein S3 [Sulfolobus islandicus Y.G.57.14]
gi|228012752|gb|ACP48513.1| ribosomal protein S3 [Sulfolobus islandicus Y.N.15.51]
gi|228019951|gb|ACP55358.1| ribosomal protein S3 [Sulfolobus islandicus M.16.27]
gi|238380938|gb|ACR42026.1| ribosomal protein S3 [Sulfolobus islandicus M.16.4]
gi|284445795|gb|ADB87297.1| ribosomal protein S3 [Sulfolobus islandicus L.D.8.5]
gi|323474755|gb|ADX85361.1| ribosomal protein S3 [Sulfolobus islandicus REY15A]
gi|323477483|gb|ADX82721.1| ribosomal protein S3 [Sulfolobus islandicus HVE10/4]
Length = 216
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 102/188 (54%), Gaps = 6/188 (3%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
+++E L ++ Y+GVEV TP+ T +II A R ++G GR I++L + +K F
Sbjct: 4 KIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIKQLAQIFEKVFGL 63
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
EN ++ V N L A A L L G RRA + +R IM +GA G E+I+S
Sbjct: 64 -ENP-QITITNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIIS 121
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM----LEWDQK 195
GKL +RA+ K K+G + SGQ + + ID A+ +L+ G+ G++V I +E
Sbjct: 122 GKLTTERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGIFGVEVVITKPLKIEDKIS 181
Query: 196 GKQGPTTP 203
K+ P+ P
Sbjct: 182 LKESPSVP 189
>gi|305662597|ref|YP_003858885.1| 30S ribosomal protein S3 [Ignisphaera aggregans DSM 17230]
gi|304377166|gb|ADM27005.1| SSU ribosomal protein S3P [Ignisphaera aggregans DSM 17230]
Length = 209
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 105/184 (57%), Gaps = 2/184 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ K F+ G+ ++E L + GY+GV++ TP+ T +II A R ++G +G+
Sbjct: 2 VNIKNYFIEQGIKKVAVDEYLASKFWRAGYAGVDLIRTPLGTRVIIYAARPGLIIGRRGQ 61
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+R + V++K F EN ++ + N L A A ++ L G+ RRA + LR
Sbjct: 62 TLRTIQLVIEKLFGI-ENP-QITVVEAENPDLNARIVAFNIALALERGIHFRRAGFIALR 119
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
+M +GA GCE+++SGKL A+RA+ K K G + SG+ +D AV HVLL+ G+ GI
Sbjct: 120 RVMAAGAIGCEIVISGKLVAERARYEKLKMGKVYKSGEQSFRLVDRAVAHVLLKPGMYGI 179
Query: 185 KVKI 188
+V I
Sbjct: 180 EVLI 183
>gi|408404342|ref|YP_006862325.1| 30S ribosomal protein S3p [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408364938|gb|AFU58668.1| 30S ribosomal protein S3p [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 222
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 10/173 (5%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
ELNE L L + GY GVEV+ TPV I I TR V+G KG I++L + ++++F
Sbjct: 2 ELNEFLADALKDAGYGGVEVQKTPVGARITIYVTRPGLVIGRKGTGIKDLMTKIEQKFGL 61
Query: 80 --PENSV-ELYAEKVNNRGLCA-IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCE 135
P+ SV E+ ++N +C IAQ + G A RRA L IM +GA G E
Sbjct: 62 QNPQISVLEVTNPELNPHIMCNRIAQL------IERGTAFRRAAMWSLNTIMNAGALGVE 115
Query: 136 VIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
V++SGKLR +RA K G + SG + + + V HVL + G++GI+++I
Sbjct: 116 VVISGKLRTERAHFEKHTIGVVPKSGDIAGQIVTTGVSHVLTKMGLMGIQLRI 168
>gi|300521570|gb|ADK25996.1| r-protein S3p [Candidatus Nitrososphaera gargensis]
Length = 236
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 10/173 (5%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
ELNE L L + GY GVEV+ TPV I I TR V+G KG I++L + ++++F
Sbjct: 16 ELNEFLADALKDAGYGGVEVQKTPVGARITIYVTRPGLVIGRKGTGIKDLMTKIEQKFGL 75
Query: 80 --PENSV-ELYAEKVNNRGLCA-IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCE 135
P+ SV E+ ++N +C IAQ + G A RRA L IM +GA G E
Sbjct: 76 QNPQISVLEVTNPELNPHIMCNRIAQL------IERGTAFRRAAMWSLNTIMNAGALGVE 129
Query: 136 VIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
V++SGKLR +RA K G + SG + + + V HVL + G++GI+++I
Sbjct: 130 VVISGKLRTERAHFEKHTIGVVPKSGDIAGQIVTTGVSHVLTKMGLMGIQLRI 182
>gi|359416222|ref|ZP_09208574.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
gi|358033425|gb|EHK01978.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
Length = 351
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 2/185 (1%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
++++F+ G +LNE L EL GYSG +++ TP T+I++ A R V+G G RI
Sbjct: 2 QEKQFIEKGAQKVKLNEFLQDELEGAGYSGFDLQRTPTSTKIVVEAQRPGLVIGRGGSRI 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
RELTS +++ F F +E+ ++ + A A+S+ L G V+R Y +R +
Sbjct: 62 RELTSALEEEFDFENPQIEVN--EIEDADGDAQVVADSIADWLEKGGHVKRVGYTYVRRM 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
E+G G EV ++GKL R ++ KF GY+ G E + + + G +G+KV
Sbjct: 120 KEAGVIGAEVEITGKLSGNRGRTEKFSFGYVKRCGNTSKENVQKGYQLARTKPGAIGVKV 179
Query: 187 KIMLE 191
++M E
Sbjct: 180 RVMKE 184
>gi|389860655|ref|YP_006362895.1| 30S ribosomal protein S3 [Thermogladius cellulolyticus 1633]
gi|388525559|gb|AFK50757.1| ribosomal protein S3 [Thermogladius cellulolyticus 1633]
Length = 228
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 11/209 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ G+ +++ L + GY+GVE+ TP ++I A ++G G IR
Sbjct: 7 KQYFINLGLKKTMIDQFLASYFVDAGYAGVELYKTPTGHRVVIYAEYPGRLIGRGGSVIR 66
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT++ Q RF +V + V + L A A + L + RR +L+ IM
Sbjct: 67 KLTAIFQTRFGL--ENVNITVSPVTDADLNARVVAFRIVRALEKEIPYRRVMMAMLKRIM 124
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
++GA G E+++SGKLR +RA K + G + +G V+ +D AV LL+ G+ G++V
Sbjct: 125 DAGALGAEIVISGKLRGERATYEKMRTGKIYKAGDLVDYIVDRAVAKTLLKPGIFGVEVI 184
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
I+ P+ PLPD V + LK E
Sbjct: 185 IV---------KPSIPLPDQVELKQLKPE 204
>gi|347524202|ref|YP_004781772.1| 30S ribosomal protein S3 [Pyrolobus fumarii 1A]
gi|343461084|gb|AEM39520.1| ribosomal protein S3 [Pyrolobus fumarii 1A]
Length = 242
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 99/182 (54%), Gaps = 2/182 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ FV + A+++E L + GY+GV + P+ + I A R ++G G+ IR
Sbjct: 5 KKYFVQKALREAKIDEYLAKRFYRAGYAGVRIIELPIGHRVYIYAERPGMIIGRGGQTIR 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
EL + +K F N+ ++ +V L A A + L G RR +LR I+
Sbjct: 65 ELQYIFEKHFGL--NNPQVSVRRVEEPDLNARVVASRIAVLLERGAHYRRVANVMLRRIL 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G E+++SGKLR +RA+ K + G + S+G V +D AV HVLL+ GV GI+VK
Sbjct: 123 AAGAIGAEIVISGKLRTERARYEKLRAGKVYSTGYQVEYMVDRAVMHVLLKPGVYGIEVK 182
Query: 188 IM 189
I+
Sbjct: 183 IV 184
>gi|385805558|ref|YP_005841956.1| 30S ribosomal protein S3 [Fervidicoccus fontis Kam940]
gi|383795421|gb|AFH42504.1| 30S ribosomal protein S3P [Fervidicoccus fontis Kam940]
Length = 251
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ KR F+ + +++E L ++ GY+GV+V TP+ T ++IRA R ++G +G+
Sbjct: 2 VNIKRYFIEKNMSVVKVDEYLAKQFYRAGYAGVDVYRTPLGTRVVIRAERPAFIIGRRGQ 61
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
I+ L++V + F EN ++ V N L A A L L G R+ + LR
Sbjct: 62 TIKTLSNVFENYFGL-ENP-QITVMPVENPDLNARVVAFRLAVSLERGFHFRKLAFAALR 119
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM +GA G E+I+SGK+ ++RA+ KF+ G + +G+ +D AV H LL+ G+ G+
Sbjct: 120 RIMAAGAAGAEIIISGKITSERARYEKFRAGKIYKTGEQATYIVDKAVAHALLKPGIYGV 179
Query: 185 KVKIM 189
KV I+
Sbjct: 180 KVIIV 184
>gi|327400866|ref|YP_004341705.1| 30S ribosomal protein S3 [Archaeoglobus veneficus SNP6]
gi|327316374|gb|AEA46990.1| ribosomal protein S3 [Archaeoglobus veneficus SNP6]
Length = 246
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV D + ++ E + +E+ G+ GV++ TP+ T++ + R V+G+ GRRIR
Sbjct: 4 ERKFVEDRIKKLKVKEWMIQEVRNAGFGGVDITRTPLGTQVTLFVERPGLVIGKGGRRIR 63
Query: 68 ELTSVVQK-RFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
LT +++ + P+ SV+ + N L A A +L G R+A Y L I
Sbjct: 64 ALTERLKEFGIENPQVSVDEIEKPEFNAQLMASLLARALER----GWYFRKAGYRFLYRI 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
ME+GAKGCE+ +SGKL ++RA++ KF G M+ +G+P + + + + GVLG+ V
Sbjct: 120 MEAGAKGCEIEISGKLTSERARTEKFLAGTMVHTGEPASSMVRKGFDIAIKKLGVLGVTV 179
Query: 187 KIMLEWDQKGKQGPTTPLPD 206
+I+ P LPD
Sbjct: 180 RIIP---------PDVELPD 190
>gi|284162454|ref|YP_003401077.1| 30S ribosomal protein S3 [Archaeoglobus profundus DSM 5631]
gi|284012451|gb|ADB58404.1| ribosomal protein S3 [Archaeoglobus profundus DSM 5631]
Length = 219
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+ D + ++ E L E+ G+ GV++ TP+ T++ + R V+G GRRI+
Sbjct: 4 ERKFIRDRLIKLKVKEWLKEEVKNAGFGGVDIVRTPLGTQVSLFVERPGLVIGRGGRRIK 63
Query: 68 ELTSVVQKRFK-FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
++Q++ K F ++ +L ++V A A L L G RRA Y L I
Sbjct: 64 ----ILQEKLKEFGLDNPQLSVDEVKRPEFNAQLMATLLARALERGWYFRRAGYRFLYRI 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
ME+GAKGC++ +SGKL ++RA++ KF G ++ +G P E +D + + GV G+ V
Sbjct: 120 MEAGAKGCQIEISGKLVSERARTEKFTAGTIVHTGDPAYELVDKGFDIAIKKLGVYGVSV 179
Query: 187 KIMLEWDQKGKQGPTTPLPD 206
KI+ P LPD
Sbjct: 180 KII---------PPDVELPD 190
>gi|15920635|ref|NP_376304.1| 30S ribosomal protein S3P [Sulfolobus tokodaii str. 7]
gi|27734524|sp|Q975I7.1|RS3_SULTO RecName: Full=30S ribosomal protein S3
gi|15621418|dbj|BAB65413.1| 30S ribosomal protein S3P [Sulfolobus tokodaii str. 7]
Length = 225
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + ++E L ++ Y+GVE+ TP+ T +II A R ++G+ G+ I+
Sbjct: 5 KKYFLQRSMTKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPALIIGKGGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L ++++ F ++ ++ V N L A A L L G RRA + +R IM
Sbjct: 65 QLAQMLERYFGL--DNPQITVTSVENPELNARVMAFRLAIALEKGYHFRRAAFITIRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G EVI+SGKL ++RAK K K+G + SG +++ +D AV +L+ GV G+++
Sbjct: 123 NAGALGAEVIISGKLTSERAKYEKLKEGVVYKSGAFLDKIVDRAVAIAMLKPGVYGVEIL 182
Query: 188 I---MLEWDQ-KGKQGPTTPLPDLVTI 210
I M D+ + ++ P P ++VT+
Sbjct: 183 ITKPMKSVDKIELREQPKGPGENMVTV 209
>gi|222064015|emb|CAQ86670.1| putative ribosomal protein S3 [Histomonas meleagridis]
Length = 89
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 65/89 (73%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
M++GA+GCEV++SGK+R+ RA +MKF++GYM+ SG +Y+ AV H+ ++Q V+GI+V
Sbjct: 1 MDAGARGCEVVISGKMRSARAAAMKFREGYMVKSGDVSQKYVLKAVGHIPMKQAVVGIRV 60
Query: 187 KIMLEWDQKGKQGPTTPLPDLVTIHPLKE 215
IML D +G GP P PD++ +H K+
Sbjct: 61 LIMLAHDPQGITGPREPQPDVIKVHEAKD 89
>gi|14600662|ref|NP_147181.1| 30S ribosomal protein S3 [Aeropyrum pernix K1]
gi|6685919|sp|Q9YF78.1|RS3_AERPE RecName: Full=30S ribosomal protein S3
gi|5104002|dbj|BAA79318.1| 30S ribosomal protein S3P [Aeropyrum pernix K1]
Length = 246
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 100/189 (52%), Gaps = 4/189 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T++ K F+ G+ +++E L + E GYS V+V T + T I I A R ++G
Sbjct: 1 MPTKVVKH--FLNQGLLRTKIDEWLAQNFYEAGYSRVKVVQTSLGTNITIWAERPALIIG 58
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+G IR L V Q F P + + E+ N L A QA + + G+ RR +
Sbjct: 59 RRGATIRRLQEVFQTVFGLPNPRIRV--EQPENPMLDARVQAFRIARSIERGIHFRRVAF 116
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
+ IM +GA G E+ +SGKL ++RA+ KFK G + SG V+E +D A + L +G
Sbjct: 117 AAINRIMSNGALGVEITISGKLTSERARFEKFKAGKVYKSGHKVDELVDRASAYARLPKG 176
Query: 181 VLGIKVKIM 189
V+G+ V I+
Sbjct: 177 VIGVDVIIV 185
>gi|65051|emb|CAA24702.1| ribosomal protein S1 [Xenopus laevis]
Length = 125
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 51/65 (78%)
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLP 205
RAKSMKF DG MI SG PVN Y+D+AVRHVLLRQGVLGIKVKIML D GK GP PLP
Sbjct: 19 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPKDPSGKIGPKKPLP 78
Query: 206 DLVTI 210
D V +
Sbjct: 79 DHVAL 83
>gi|350588289|ref|XP_003357250.2| PREDICTED: hypothetical protein LOC100627821 [Sus scrofa]
Length = 203
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 51/57 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQN 57
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEII+ ATR Q+
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIMLATRNQS 57
>gi|124028161|ref|YP_001013481.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456]
gi|152060866|sp|A2BMC5.1|RS3_HYPBU RecName: Full=30S ribosomal protein S3
gi|123978855|gb|ABM81136.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456]
Length = 247
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 100/182 (54%), Gaps = 2/182 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
KR F+ + +++E L + GY+GV++ P+ T +II A R ++G +G IR
Sbjct: 5 KRYFIKKAMVQTQIDEYLAKRFYRAGYAGVQIIQFPLGTRVIIYAERPAMIIGRRGETIR 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L ++ + F ++ ++ +V N L A A + L G RR + R ++
Sbjct: 65 QLAAIFEHEFGL--SNPQITVRRVENPDLNARVVASRIAVLLERGAYYRRVANVMARRVL 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G ++++SGKLR +RA+ K + G + ++G V +D AV HV L+ GVLGI+V
Sbjct: 123 NAGAIGVQIVISGKLRTERARYEKVRRGKVYTTGHQVEYMVDRAVMHVTLKPGVLGIEVM 182
Query: 188 IM 189
I+
Sbjct: 183 IV 184
>gi|332796534|ref|YP_004458034.1| 30S ribosomal protein S3 [Acidianus hospitalis W1]
gi|332694269|gb|AEE93736.1| ribosomal protein S3 [Acidianus hospitalis W1]
Length = 227
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 101/184 (54%), Gaps = 2/184 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ K+ F+ + L+E L ++ Y+GV++ TP+ T III A R ++G+ G+
Sbjct: 2 VNIKQYFLQKSMTKVMLDEYLAKQFYNAEYAGVDIIKTPMGTRIIIYAGRPAMIIGKGGK 61
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
I++L V +K F EN ++ V+N L A A L L G RRA + +R
Sbjct: 62 TIKQLAQVFEKFFNL-ENP-QITVTNVDNPELNARVMAFRLAVALEKGYHFRRAAFITIR 119
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM +GA G EV+VSGK+ ++RAK K K+G + +G + ID AV L+ G+ G+
Sbjct: 120 RIMNAGALGAEVVVSGKITSERAKYEKLKEGTVYKTGNSLETMIDRAVAIATLKPGIYGV 179
Query: 185 KVKI 188
++ I
Sbjct: 180 EIII 183
>gi|167043045|gb|ABZ07757.1| putative ribosomal protein S3, C-terminal domain protein
[uncultured marine microorganism HF4000_ANIW141A21]
Length = 214
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 10/174 (5%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
++E L + + GY G E+ +PV T I I T+ V+G +G IRELT ++K F+
Sbjct: 11 IDEYLEKNIESAGYGGFEIITSPVGTRITIYVTKPGLVIGRRGIGIRELTENLEKIFELQ 70
Query: 81 ENSVELYAEKV---NNRGLCA-IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV 136
+ ++ ++ N R +C +AQ + G A RRA + IM SGA G E+
Sbjct: 71 NLQISVFEVEIPEQNARIMCNRVAQT------VARGTAFRRAAMWTVNAIMRSGALGAEI 124
Query: 137 IVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
I++GKLR++R+ + K+KDG + +G P + AV V L+ G+ GI+VKI +
Sbjct: 125 IIAGKLRSERSHTEKYKDGVVPKTGYPATLTVREAVSDVKLKMGLYGIQVKIAI 178
>gi|149068839|gb|EDM18391.1| rCG40478, isoform CRA_a [Rattus norvegicus]
Length = 55
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 48/54 (88%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+D+AVRHVLLRQG
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 54
>gi|315425856|dbj|BAJ47509.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
gi|315427714|dbj|BAJ49310.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
gi|343484671|dbj|BAJ50325.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
Length = 203
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 11/192 (5%)
Query: 19 AELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFK 78
A++ E L +L + GV + TP+ T + I A R V+G KG+ I+E+T ++K+F
Sbjct: 15 ADIEEYLREKLKNAFFGGVSISFTPLGTRVTIYAMRPSRVIGPKGKVIKEITEALEKQFG 74
Query: 79 FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
+ + +V L AE + L GL RR + ++ IME+GAKG EV +
Sbjct: 75 --VENPVVTVVEVEVPELNPYVMAERIAQDLARGLRYRRVGFWAVKRIMEAGAKGVEVHI 132
Query: 139 SGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQ 198
SGKL + R+++ KF +G+M SG+ Y+ VLL+ G+ G++V I
Sbjct: 133 SGKLTSARSRTEKFTEGFMPKSGELAMNYVLEGKSSVLLKTGLFGVRVLIY--------- 183
Query: 199 GPTTPLPDLVTI 210
P PLP+ + +
Sbjct: 184 PPDAPLPEEIKV 195
>gi|218117273|emb|CAQ37764.1| 40S ribosomal protein S3 [Echinorhynchus truttae]
Length = 71
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 56/71 (78%)
Query: 57 NVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR 116
V+G+KGRRIREL+SVV KRF + L + KV RGLCA+ QAESLRYKL+ G+AVR
Sbjct: 1 QVVGDKGRRIRELSSVVAKRFNLKPEKLVLLSSKVEQRGLCAMTQAESLRYKLIEGVAVR 60
Query: 117 RACYGVLRFIM 127
RACYGV+RF+M
Sbjct: 61 RACYGVVRFVM 71
>gi|297527401|ref|YP_003669425.1| 30S ribosomal protein S3 [Staphylothermus hellenicus DSM 12710]
gi|297256317|gb|ADI32526.1| ribosomal protein S3 [Staphylothermus hellenicus DSM 12710]
Length = 225
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
L+E L + GY+G+E+ TP +II A V+G G IR+L +++Q F
Sbjct: 20 LDEFLANYFKDAGYAGMELYKTPTGYRVIIYAEYPGRVIGRGGSIIRKLMTIMQTHFGL- 78
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V + V + L A A + L + RR +LR IME+GA G E+I+SG
Sbjct: 79 -ENVNITVSPVPDPDLNARVVAFRIVRALEKEIPYRRVAMAMLRRIMEAGAVGAEIIISG 137
Query: 141 KLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGP 200
KLR++RA+ K K G + +G V+ +D AV LL++GV G++V I+ P
Sbjct: 138 KLRSERARYQKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEVVIVR---------P 188
Query: 201 TTPLPDLVTIHPLKEE 216
PD V I +K E
Sbjct: 189 HLKPPDYVEIKSVKPE 204
>gi|320101360|ref|YP_004176952.1| 30S ribosomal protein S3 [Desulfurococcus mucosus DSM 2162]
gi|319753712|gb|ADV65470.1| SSU ribosomal protein S3P [Desulfurococcus mucosus DSM 2162]
Length = 222
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K F+ G+ ++E L + GY+ VE+ TP ++I A ++G G I+
Sbjct: 7 KSYFLNYGLKKLMIDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIK 66
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L++++Q RF ++V + V + L A A + L + RR +L+ +M
Sbjct: 67 KLSTILQTRFGL--DNVNVTISPVVDPDLNARVVAFRIVRALEKEIPFRRVIMYMLKRVM 124
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
++GA G E+IVSGKLR +RA K K G + +G+PV +D AV LL+ G+ G++V
Sbjct: 125 DAGAVGAEIIVSGKLRGERATYEKLKAGKVYKAGEPVEYVVDRAVAKALLKPGIFGVEVV 184
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
I+ P LPD V + LK E
Sbjct: 185 IV---------KPNIKLPDHVEVKALKPE 204
>gi|344256720|gb|EGW12824.1| 40S ribosomal protein S3 [Cricetulus griseus]
Length = 94
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 150 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVT 209
MKF DG MI G PVN Y+D+A+RHVLLRQGVLGIKVK+ML WD GK GP PLPD V+
Sbjct: 1 MKFVDGLMIHCGDPVNYYVDTAMRHVLLRQGVLGIKVKVMLPWDPSGKIGPKKPLPDHVS 60
Query: 210 IHPLKEEVYVAPATATS 226
K+E+ P T S
Sbjct: 61 TVEPKDEIL--PNTPIS 75
>gi|288931516|ref|YP_003435576.1| 30S ribosomal protein S3 [Ferroglobus placidus DSM 10642]
gi|288893764|gb|ADC65301.1| ribosomal protein S3 [Ferroglobus placidus DSM 10642]
Length = 223
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 108/203 (53%), Gaps = 20/203 (9%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+ D V + E + E+ G+ G+++ TP+ T++ + R V+G GRRI+
Sbjct: 4 ERKFIEDKVKKLMVKEWIVEEVRNAGFGGLDIVRTPLGTQVTLFVERPGLVIGRGGRRIK 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
LT +K +F ++ ++ ++++ A A L L G R+A Y L IM
Sbjct: 64 ALT---EKLKEFGLDNPQISVDEIDKPEFNAQLMASLLARALERGWYFRKAGYRFLYRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP----VNEYIDSAVRHVLLRQGVLG 183
E+GAKGCE+ +SGKL ++RA++ KF G +I +G P V E D A++ + GV G
Sbjct: 121 EAGAKGCEIEISGKLTSERARTEKFIAGTIIHTGDPAITCVREGFDIAIKKL----GVYG 176
Query: 184 IKVKIMLEWDQKGKQGPTTPLPD 206
++V+I+ P LPD
Sbjct: 177 VRVRII---------PPDAELPD 190
>gi|302348032|ref|YP_003815670.1| 30S ribosomal protein S3 [Acidilobus saccharovorans 345-15]
gi|302328444|gb|ADL18639.1| 30S ribosomal protein S3P [Acidilobus saccharovorans 345-15]
Length = 238
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 111/213 (52%), Gaps = 12/213 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K F+ G+ +++E L + GY+GV++ + + T + I A R V+G +G IR
Sbjct: 5 KSYFLRQGLTRVKVDEYLAQNFYTAGYAGVQIVQSGLGTRVHIFAERPALVIGRRGATIR 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L +V++K F V++ + +N L A QA + L G RR +R IM
Sbjct: 65 KLQAVLEKVFGL--EGVQVTVSQPDNMELNARVQAFRIARALEMGYHFRRVAMATMRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
E+GA G E+++SGKL +RA+ K + G +I +G V+ Y D A+ + L G++G++V+
Sbjct: 123 EAGAVGVEIVISGKLSRERARFEKLQAGKVIKTGNVVDVYTDRAIAYAKLPLGIIGVEVR 182
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVA 220
I+ P PD++ + P E +A
Sbjct: 183 IIR---------PEAARPDIL-LRPDSEAAAIA 205
>gi|126465922|ref|YP_001041031.1| 30S ribosomal protein S3 [Staphylothermus marinus F1]
gi|152060907|sp|A3DNB3.1|RS3_STAMF RecName: Full=30S ribosomal protein S3
gi|126014745|gb|ABN70123.1| SSU ribosomal protein S3P [Staphylothermus marinus F1]
Length = 224
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
L+E L + GY+G+E+ TP ++I A ++G G IR+L +++Q F
Sbjct: 20 LDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIRKLMTIMQTHFGL- 78
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V + V + L A A + L + RR +LR +ME+GA G E+I+SG
Sbjct: 79 -ENVNITVSPVPDPDLNARIVAFRIVRALEKEIPYRRVAMAMLRRVMEAGAVGAEIIISG 137
Query: 141 KLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGP 200
KLR++RA+ K K G + +G V+ +D AV LL++GV G++V I+ P
Sbjct: 138 KLRSERARYEKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEVVIVR---------P 188
Query: 201 TTPLPDLVTIHPLKEE 216
PD V I +K E
Sbjct: 189 HLKPPDYVEIKSVKPE 204
>gi|218884480|ref|YP_002428862.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n]
gi|218766096|gb|ACL11495.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n]
Length = 223
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K F+ G+ ++E L + GY+ VE+ TP ++I A ++G G I+
Sbjct: 7 KSYFLEYGLKKLMIDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIK 66
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L++++Q +F ++V + V + L A A + L + RR +L+ +M
Sbjct: 67 KLSTILQNKFGL--DNVNITISPVIDPDLNARVVAFRIVRALEKEIPFRRVMMYMLKRVM 124
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
++GA G E+I+SGKLR +RA K K G + +G+PV +D AV LL+ G+ G++V
Sbjct: 125 DAGAIGAEIIISGKLRGERATYEKLKAGKVYKAGEPVEYMVDRAVVKALLKPGIFGVEVV 184
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
I+ P +PD V I LK E
Sbjct: 185 IV---------KPGIKMPDHVEIKTLKPE 204
>gi|268323281|emb|CBH36869.1| putative 30S ribosomal protein S3P [uncultured archaeon]
Length = 234
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FV +G+ ++E +EL GY G++++ TP+ T+I + + ++G+ G+RI+++T
Sbjct: 6 FVEEGIKKVRMDEYFQKELERAGYGGMDIKRTPMGTQITVHVEKPGMIIGKNGKRIKKVT 65
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+ K+ + +++ + + L A + L + G RRA L+ IM +G
Sbjct: 66 DEITKKQELDNPQIDV--QPIAAPELSAQLMSNRLAKLIERGWHFRRAGRSTLQRIMGAG 123
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
A GCE+ +SGKLR R + K +GY+ G E +D + GV+G+ V I+
Sbjct: 124 ALGCEITMSGKLRGPRGRVEKMVEGYIKHCGSVAEEIVDKGYSIAQKKTGVIGVMVWIV- 182
Query: 191 EWDQKGKQGPTTPLPDLVTIHPLKEEVYV 219
P +PD ++ +KE+V V
Sbjct: 183 --------APDANIPDSFRMNVVKEDVVV 203
>gi|255513430|gb|EET89696.1| ribosomal protein S3- domain protein [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 207
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R+F+ D + +++ L EL++ G+S VE++ TP+ T I + V+G G+ I
Sbjct: 4 ERRFIDDAIIKLNISKFLGTELSKAGFSRVEIQKTPIITRITVYVLNPGRVIGRGGKAID 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT ++ RF N+ + +V N+ + + A+ + +KL G+ R+ L+ IM
Sbjct: 64 DLTETIKSRFNV--NNPRISVVEVQNKMIEPLLVAKDIAFKLERGINPRKIIQFTLKSIM 121
Query: 128 ESGAKGCEVIVSGKLRAQ--RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 185
E+GA G E+I+SGKL A+ RAKS++ GY+ +G +N ++ V + G +G+
Sbjct: 122 ENGALGAEIIISGKLAAKGARAKSIRKSVGYIPKAGDVIN-LVNKGVATAYPKYGAIGVV 180
Query: 186 VKIMLEWDQKGKQGPTTPLPD 206
V+I+ P T PD
Sbjct: 181 VRIV---------PPGTVFPD 192
>gi|149064299|gb|EDM14502.1| rCG46746 [Rattus norvegicus]
Length = 77
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 53/64 (82%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QISK RK VA+G+F AELNE LT+ELAEDG+SGVEV VT RTEI I ATRTQ+VLGEKG
Sbjct: 2 QISKNRKSVAEGIFKAELNEFLTQELAEDGHSGVEVWVTLTRTEINISATRTQDVLGEKG 61
Query: 64 RRIR 67
IR
Sbjct: 62 HGIR 65
>gi|11499503|ref|NP_070744.1| 30S ribosomal protein S3P [Archaeoglobus fulgidus DSM 4304]
gi|6094176|sp|O28360.1|RS3_ARCFU RecName: Full=30S ribosomal protein S3
gi|2648625|gb|AAB89335.1| SSU ribosomal protein S3P (rps3P) [Archaeoglobus fulgidus DSM 4304]
Length = 229
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV + + + E + E+ G+ GV++ TP+ T++ + R V+G+ GRRI+
Sbjct: 4 ERKFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIK 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
LT +K F + ++ ++V A A L L G RRA Y L IM
Sbjct: 64 ALT---EKLKDFGIENPQVSVDEVEKPEFNAQLMASLLARALERGWYFRRAGYRFLYRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
E+GAKGCE+ +SGKL ++RA++ KF G ++ +G P + + + GVLG+ V+
Sbjct: 121 EAGAKGCEIEISGKLVSERARTEKFVAGTIVHTGDPAESMVQKGFDIAIKKLGVLGVSVR 180
Query: 188 IMLEWDQKGKQGPTTPLPD 206
I+ P LPD
Sbjct: 181 IIP---------PDVTLPD 190
>gi|170290796|ref|YP_001737612.1| 30S ribosomal protein S3 [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174876|gb|ACB07929.1| ribosomal protein S3 [Candidatus Korarchaeum cryptofilum OPF8]
Length = 251
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 106/194 (54%), Gaps = 6/194 (3%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+KFV +G+ +L+E + + + G+ GVE+ TP+R I + ++G GR +
Sbjct: 11 KKFVQEGIVKYKLHEFMEKISDKAGFHGVEISSTPIRDIITVYVESPGVMIGRGGRTSKR 70
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
++ ++++ ++ A+KV+ L A + ++ G ++ Y L +M
Sbjct: 71 ISDILKEELGIQNPYIQ--AKKVDKPFLSTRIVASYIARRIAKGERYKKVAYSALGRVMA 128
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GAKG E+ +SGK +QRA+ +F++G + GQ E ++ AV+HVL+ QG++G++V+I
Sbjct: 129 EGAKGVEIRLSGKFGSQRAREERFREGVIYRCGQDYIENVEYAVKHVLMPQGMIGVRVRI 188
Query: 189 MLEWDQKGKQGPTT 202
+ + G +GP
Sbjct: 189 V----KPGVRGPDA 198
>gi|77024944|gb|ABA61371.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 269
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 18/234 (7%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+Q S RKF+ V + E L + + G+ G++ + TP T++ + A R V+G K
Sbjct: 2 SQNSTIRKFIDRNVERLLVREFLLSKTEKAGFGGLDFQRTPEGTKVTLSAERVGMVIGRK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G+ I EL +Q F +E+ +++N L A A L L G RRA +
Sbjct: 62 GKIINELQRRLQNDFNLENPRLEVA--EIDNPALNAQVMASKLASALERGWYFRRAGHSS 119
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
L IM++GAKGC V++SGKL R ++ KF+ G++ G +++D + + G +
Sbjct: 120 LLNIMDAGAKGCLVVLSGKLTGSRNRTQKFQAGHIKYCGDTAIQFMDVGKAVCVKKLGTI 179
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATSI------ELP 230
G V IM P + LP + I + EV +AP +I ELP
Sbjct: 180 GCTVAIMR---------PGSKLPHEIRIKE-RHEVGLAPLADVAIIKEGSDELP 223
>gi|390938985|ref|YP_006402723.1| 30S ribosomal protein S3 [Desulfurococcus fermentans DSM 16532]
gi|390192092|gb|AFL67148.1| ribosomal protein S3 [Desulfurococcus fermentans DSM 16532]
Length = 223
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K F+ G+ ++E L + GY+ VE+ TP ++I A ++G G I+
Sbjct: 7 KSYFLEYGLKKLMIDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIK 66
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L++++Q R ++V + V + L A A + L + RR +L+ +M
Sbjct: 67 KLSTILQNRLGL--DNVNITISPVIDPDLNARVVAFRIVRALEKEIPFRRVMMYMLKRVM 124
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
++GA G E+I+SGKLR +RA K K G + +G+PV +D AV LL+ G+ G++V
Sbjct: 125 DAGAIGAEIIISGKLRGERATYEKLKAGKVYKAGEPVEYIVDRAVVKALLKPGIFGVEVV 184
Query: 188 IMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
I+ P +PD V I LK E
Sbjct: 185 IV---------KPGIRMPDHVEIKTLKPE 204
>gi|374633062|ref|ZP_09705429.1| ribosomal protein S3, eukaryotic/archaeal type [Metallosphaera
yellowstonensis MK1]
gi|373524546|gb|EHP69423.1| ribosomal protein S3, eukaryotic/archaeal type [Metallosphaera
yellowstonensis MK1]
Length = 231
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 7/203 (3%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + ++E L ++ Y+G E+ TP+ T +II A R ++G+ G+ I+
Sbjct: 5 KKYFLQKSLTRVMVDEYLAKQYYNAEYAGSEIIKTPMGTRVIIYAGRPAMIIGKGGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L ++++ F EN ++ + L A A L L G RRA + +R IM
Sbjct: 65 QLHQILERYFNL-ENP-QITVAQPEKPELNARVMAFRLAVTLERGYHFRRAAFITIRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G EVIVSGK+ ++RAK K K+G + +G ++ +D A+ L+ G+ G++V
Sbjct: 123 NAGALGAEVIVSGKITSERAKFEKLKEGIVYKTGNSLDVMVDRAIAIATLKMGIYGVEVI 182
Query: 188 IMLEWDQKGKQG-----PTTPLP 205
I K PT+P P
Sbjct: 183 ITKPLKNIDKMSLRELTPTSPQP 205
>gi|307006559|gb|ADN23564.1| 40S ribosomal protein S3 [Hyalomma marginatum rufipes]
Length = 91
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 50/65 (76%)
Query: 152 FKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIH 211
F DG MI SG+P N+Y+++AVRHVLLRQGVLGIKVKIML D GK GP PLPD V+I
Sbjct: 1 FVDGLMIHSGEPTNDYVETAVRHVLLRQGVLGIKVKIMLPCDPNGKLGPKRPLPDHVSIM 60
Query: 212 PLKEE 216
K+E
Sbjct: 61 EPKKE 65
>gi|48477718|ref|YP_023424.1| 30S ribosomal protein S3 [Picrophilus torridus DSM 9790]
gi|61215562|sp|Q6L1C1.1|RS3_PICTO RecName: Full=30S ribosomal protein S3
gi|48430366|gb|AAT43231.1| small subunit ribosomal protein S3P [Picrophilus torridus DSM 9790]
Length = 217
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 11/220 (5%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
K+++FV D + ++E L +E G+ G+E++ TP T I + R V+G G +I
Sbjct: 2 KEKRFVNDNIKRLLVSEYLRKENDNAGFGGMEMKRTPYGTNITLYVNRPGLVIGRHGTKI 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
+E+T ++KRF +E+ ++VN L ++ + L G R+A LR +
Sbjct: 62 KEMTETLEKRFAIESPQIEV--KEVNTPDLNPQIASKKIALSLEKGWNYRKAGNTSLRKM 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
++ A G + + GK+ +RA++ KF G + SG+P ++ L+ G++G+ V
Sbjct: 120 IDLNAPGVLIRIGGKISGERARAQKFMFGKIKYSGEPARSGVEYGFSEAKLKTGIIGVSV 179
Query: 187 KIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVAPATATS 226
+I+ LPD + I P+K E V A S
Sbjct: 180 RILKS---------NYRLPDDIEIKPVKIEKEVENNGAES 210
>gi|146302882|ref|YP_001190198.1| 30S ribosomal protein S3 [Metallosphaera sedula DSM 5348]
gi|172046893|sp|A4YCX2.1|RS3_METS5 RecName: Full=30S ribosomal protein S3
gi|145701132|gb|ABP94274.1| SSU ribosomal protein S3P [Metallosphaera sedula DSM 5348]
Length = 240
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 96/181 (53%), Gaps = 2/181 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + ++E L +E Y+G E+ TP+ T + I A R ++G+ G+ I+
Sbjct: 5 KKYFLQKSMTRVMVDEFLAKEYYNAEYAGSEISKTPMGTRVTIYAGRPAIIIGKDGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
L +++K F EN ++ + L A A L L G RRA + +R IM
Sbjct: 65 RLAQILEKYFNL-ENP-QITVTQPEKPELNARVMAFRLAVTLEKGYHFRRAAFMTIRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G EVIVSGK+ ++RAK K K+G + +G ++ +D A+ L+ G+ G++V
Sbjct: 123 NAGALGAEVIVSGKITSERAKFEKLKEGIVYKTGNNLDVMVDRAIAIATLKMGIYGVEVV 182
Query: 188 I 188
I
Sbjct: 183 I 183
>gi|327311857|ref|YP_004338754.1| 30S ribosomal protein S3 [Thermoproteus uzoniensis 768-20]
gi|326948336|gb|AEA13442.1| 30S ribosomal protein S3P [Thermoproteus uzoniensis 768-20]
Length = 194
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L +LA GY E+ TP+ T I+I A R ++G+KG ++EL+ ++ +
Sbjct: 2 IKEFLEYKLARLGYVDSEILKTPLGTRIVIYAERPSRIIGKKGAVVKELSQILGSKLGVE 61
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ KV+ + A + + G+ RR + +R + E+GA+G E+++S
Sbjct: 62 NPQIDVIDISKVDVPEMFPKVVAYRIANAMAKGIRFRRVAFIAIRQVTEAGARGFELVIS 121
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RAK K+K G + +G + + SAV HVLL+ G+ GIK I
Sbjct: 122 GKLSTERAKFEKYKIGKVYKTGADSTKTMRSAVVHVLLKPGIYGIKATI 170
>gi|126459168|ref|YP_001055446.1| 30S ribosomal protein S3 [Pyrobaculum calidifontis JCM 11548]
gi|126248889|gb|ABO07980.1| SSU ribosomal protein S3P [Pyrobaculum calidifontis JCM 11548]
Length = 220
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 95/186 (51%), Gaps = 4/186 (2%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L LA+ GY E+ TP+ T I+I A R ++G KG ++E++S++ +
Sbjct: 28 IKEFLEYRLAKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSSILANKLGVE 87
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ L A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 88 NPQIDVIDVSKIEAPELFPKVVAYRIANAMARGVRFRRVMFVAVRQLMEAGAKGFEIVVS 147
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI---MLEWDQKG 196
GKL +RAK K G + G + AV HVLL+ G+ GI+V+I L + +
Sbjct: 148 GKLSTERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRITPATLRYSDEY 207
Query: 197 KQGPTT 202
K P T
Sbjct: 208 KIKPPT 213
>gi|152060898|sp|A3MTL3.2|RS3_PYRCJ RecName: Full=30S ribosomal protein S3
Length = 216
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 95/186 (51%), Gaps = 4/186 (2%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L LA+ GY E+ TP+ T I+I A R ++G KG ++E++S++ +
Sbjct: 24 IKEFLEYRLAKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSSILANKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ L A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 84 NPQIDVIDVSKIEAPELFPKVVAYRIANAMARGVRFRRVMFVAVRQLMEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI---MLEWDQKG 196
GKL +RAK K G + G + AV HVLL+ G+ GI+V+I L + +
Sbjct: 144 GKLSTERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRITPATLRYSDEY 203
Query: 197 KQGPTT 202
K P T
Sbjct: 204 KIKPPT 209
>gi|307594499|ref|YP_003900816.1| 30S ribosomal protein S3 [Vulcanisaeta distributa DSM 14429]
gi|307549700|gb|ADN49765.1| ribosomal protein S3 [Vulcanisaeta distributa DSM 14429]
Length = 228
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 96/180 (53%), Gaps = 2/180 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K + D + + E L LA+ GY +V TP+ T II+ A R ++G KG ++E
Sbjct: 12 KKILQDKIKEWMIKEFLNYRLAKQGYVDSDVLKTPLGTRIIVYAERPNRIIGRKGVIVKE 71
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
LT ++ K+ + EN + + + N L A + + + G+ RRA +R IM+
Sbjct: 72 LTELLSKKLEV-ENPI-IDVTPIQNPELNPKIIANRIAWAMTKGVKFRRAGMIAIRQIMD 129
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GAKG EV +SGKL ++R++ K+ G + +G + V VLL+ G+ GI+V+I
Sbjct: 130 GGAKGAEVTISGKLTSERSRFEKYIYGTIYKNGFDSRTKVQRFVGQVLLKPGLYGIEVRI 189
>gi|193084311|gb|ACF09970.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 367
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
R F+ V + E L RE G+ G+ TP T++ ++A + V+G +G+ I E
Sbjct: 8 RAFIHRNVERQLVREYLLRETERAGFGGLSFNRTPEGTKVTLQAEQVGRVIGRRGKVIHE 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
L +Q F EN L E+V L A A L L G RRA + + IM+
Sbjct: 68 LQRRLQNDFIL-ENP-HLDVEEVAESRLSAQIMASRLASSLERGWFFRRAGHSTAQNIMD 125
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+GA+GC VI+SGK+ R + KF+ G++ G+ E++D+ + + G +G V+I
Sbjct: 126 AGARGCLVILSGKITGPRHRVEKFQQGHIKFCGETALEFMDTGFSTAVKKLGTIGCTVRI 185
Query: 189 MLEWDQKGKQGPTTPLPDLVTI 210
M P LP +TI
Sbjct: 186 MR---------PGVKLPHEITI 198
>gi|330835819|ref|YP_004410547.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4]
gi|329567958|gb|AEB96063.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4]
Length = 239
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 2/181 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + ++E L +E Y+G E+ TP+ T + I A R ++G+ G+ I+
Sbjct: 5 KKYFLQKSMTRVMVDEFLAKEYYNAEYAGSEISKTPMGTRVTIYAGRPAIIIGKDGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
L ++++ F S ++ + L A A L L G RRA + +R IM
Sbjct: 65 RLAQILERYFNL--ESPQITVAQPEKPELNARVMAFRLAVTLEKGYHFRRAAFITIRKIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G EVIVSGK+ ++RAK K K+G + +G ++ +D A+ L+ G+ G++V
Sbjct: 123 NAGALGAEVIVSGKITSERAKFEKLKEGIVYKTGNGLDVMVDRAIAIATLKMGIYGVQVV 182
Query: 188 I 188
I
Sbjct: 183 I 183
>gi|352682734|ref|YP_004893258.1| 30S ribosomal protein S3p [Thermoproteus tenax Kra 1]
gi|350275533|emb|CCC82180.1| 30S ribosomal protein S3p [Thermoproteus tenax Kra 1]
Length = 216
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 1/181 (0%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K + D V + E L +LA GY EV TP+ T I+I A R ++G+KG ++E
Sbjct: 12 KKILQDNVKRWMIKEFLEYKLARLGYIYSEVLKTPLGTRIVIYAERPSRIIGKKGAVVKE 71
Query: 69 LTSVVQKRFKFPENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
L+ ++ + +++ KV+ + A + + G+ RR + +R +
Sbjct: 72 LSQILSAKMGVDNPQIDVIDISKVDVPEMFPKVIAYRIANAMAKGIRFRRVAFVAVRQVT 131
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
E+GA+G E+++SGKL +RAK K+K G + SG + + A HVLL+ G+ GI++
Sbjct: 132 EAGARGFELVISGKLSTERAKFEKYKVGKVYKSGNDSMKTVRRAAVHVLLKPGIYGIRIA 191
Query: 188 I 188
I
Sbjct: 192 I 192
>gi|193083750|gb|ACF09437.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
SAT1000-15-B12]
Length = 259
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 91/181 (50%), Gaps = 2/181 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
R F+ V + E L RE G+ G+ TP T++ ++A + V+G +G+ I E
Sbjct: 8 RAFIHRNVERQLVREYLLRETERAGFGGLSFNRTPEGTKVTLQAEQVGRVIGRRGKVIHE 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
L +Q F EN L E+V L A A L L G RRA + + IM+
Sbjct: 68 LQRRLQNDFIL-ENP-HLDVEEVAESRLSAQIMASRLASSLERGWFFRRAGHSTAQNIMD 125
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+GA+GC VI+SGK+ R + KF+ G++ G+ E++D+ + + G +G VKI
Sbjct: 126 AGARGCLVILSGKITGPRHRVEKFQQGHVKFCGETALEFMDTGFSTAVKKLGTIGCTVKI 185
Query: 189 M 189
M
Sbjct: 186 M 186
>gi|171185213|ref|YP_001794132.1| 30S ribosomal protein S3 [Pyrobaculum neutrophilum V24Sta]
gi|170934425|gb|ACB39686.1| ribosomal protein S3- domain protein [Pyrobaculum neutrophilum
V24Sta]
Length = 224
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 97/186 (52%), Gaps = 4/186 (2%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L++ GY E+ TP+ T I+I A R ++G+KG ++E+++++ +
Sbjct: 31 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGKKGAIVKEISNILMNKLGVE 90
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 91 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAVRQLMEAGAKGFEIVVS 150
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI---MLEWDQKG 196
GKL +RA+ K G + G + AV HVLL+ G+ GI+V+I L++ +
Sbjct: 151 GKLSTERARFEKHTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRIAPAALQYSDEY 210
Query: 197 KQGPTT 202
K P T
Sbjct: 211 KIKPPT 216
>gi|325968787|ref|YP_004244979.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28]
gi|323707990|gb|ADY01477.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28]
Length = 228
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 2/180 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K + D V + E L LA+ GY +V TP+ T III A R ++G KG ++E
Sbjct: 12 KKILQDKVKEWMIKEFLNYRLAKQGYVDSDVLKTPLGTRIIIYAERPNRIIGRKGVIVKE 71
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
LT ++ ++ EN + + + + L A + + + G+ RRA +R IM+
Sbjct: 72 LTDLLSRKLDV-ENPI-IDVTPIQSPELNPKIIANRIAWAMTKGVKFRRAGMIAIRQIMD 129
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GAKG EV +SGKL ++R++ K+ G + +G + V VLL+ G+ GI+V+I
Sbjct: 130 GGAKGAEVTISGKLTSERSRFEKYVFGVIYKNGFDSRTKVQRFVGQVLLKPGLYGIEVRI 189
>gi|193083860|gb|ACF09541.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-85-F5]
Length = 231
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 11/195 (5%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L +E G+ G+ TP T++ + A + V+G +G+ I EL +Q+ FK
Sbjct: 19 VREYLLKETERAGFGGLHFNRTPEGTKVTLSAEQVGRVIGRRGKVIHELQRRLQEDFKLT 78
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+E+ E++ + + A A L L G RRA + ++ IM++GA+GC VI+SG
Sbjct: 79 NPQLEV--EEIEDSRINAQVMASRLASSLERGWFFRRAGHSTVQNIMDAGARGCIVILSG 136
Query: 141 KLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGP 200
K+ R + KF+ G++ G+ +++D + + G +G V+IM P
Sbjct: 137 KITGARHRVEKFQKGHIKYCGETALQFMDVGFSTAVKKLGTVGCTVRIMR---------P 187
Query: 201 TTPLPDLVTIHPLKE 215
T LP + I E
Sbjct: 188 GTKLPHEIAIQERHE 202
>gi|170516818|gb|ACB15220.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 258
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q S R + V + E L RE G+ G+ TP T+I +RA + V+G +G
Sbjct: 3 QQSTIRTLIGRNVERQLVREYLLRETERAGFGGLTFNRTPDGTKISLRAEQVGRVIGRRG 62
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ I EL++ ++ F + L E+V L A A + L G RRA +G
Sbjct: 63 KVIHELSARLKNDFFL--DRPHLDVEEVTEPRLNAQIMASRMSSSLERGWFFRRAGHGTA 120
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
+ IM++GA+GC V++SGK+ R + KF+ G++ G+ E++D + + G +G
Sbjct: 121 QQIMDAGARGCLVVLSGKITGARHRVEKFQQGHIKFCGETALEFMDIGFSTAVKKLGTIG 180
Query: 184 IKVKIM 189
V+IM
Sbjct: 181 CTVRIM 186
>gi|170066762|ref|XP_001868214.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167862957|gb|EDS26340.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 222
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 78/166 (46%), Gaps = 53/166 (31%)
Query: 54 RTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL 113
RTQNVLGE IREL +VV+KRF +EL AEKV R LCAIAQAESL YKL
Sbjct: 43 RTQNVLGESDHHIRELNAVVKKRF------IELNAEKVATRSLCAIAQAESLCYKL---- 92
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVR 173
I+ G +G G++R EY +A
Sbjct: 93 ------------ILRQGLRG------GRVR---------------------KEYYATA-- 111
Query: 174 HVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLV-TIHPLKEEVY 218
LRQG GI+VKIML WD G GP L D V + P E +Y
Sbjct: 112 -TPLRQGEFGIQVKIMLPWDPNGIFGPKESLSDNVKMVEPEDEIMY 156
>gi|47079410|gb|AAT10153.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 307
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M Q + R F+ V + E L RE G+ G+E TP T++ + A + V+G
Sbjct: 1 MKRQSNTIRTFINRNVERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+G+ I EL ++ FK +E+ ++ L A A L L G RRA +
Sbjct: 61 RRGKVIHELQYRLKSDFKLENPRLEV--NEIEEPRLNAQVMASRLASSLERGWFFRRAGH 118
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
+ IM++GA+GC +I+SGK+ R + KF+ G++ G+ +++D + + G
Sbjct: 119 STAQNIMDAGARGCLIILSGKISGPRHRVQKFQQGHIKFCGETALQFMDEGFSTAVKKLG 178
Query: 181 VLGIKVKIM 189
+G V+IM
Sbjct: 179 TVGCTVRIM 187
>gi|350427367|ref|XP_003494734.1| PREDICTED: 40S ribosomal protein S3-like, partial [Bombus
impatiens]
Length = 80
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Query: 161 GQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEVYVA 220
G+P NEY+++A RHVLLRQGVLGIKVKIML +D GK GP PLPD V+I K+EV+
Sbjct: 1 GEPTNEYVNTATRHVLLRQGVLGIKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVF-- 58
Query: 221 PATATS 226
P+ TS
Sbjct: 59 PSQPTS 64
>gi|119873216|ref|YP_931223.1| 30S ribosomal protein S3 [Pyrobaculum islandicum DSM 4184]
gi|152060899|sp|A1RV98.1|RS3_PYRIL RecName: Full=30S ribosomal protein S3
gi|119674624|gb|ABL88880.1| SSU ribosomal protein S3P [Pyrobaculum islandicum DSM 4184]
Length = 217
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L +L++ GY E+ TP+ T I+I A R ++G+KG ++E+++++ +
Sbjct: 24 IKEFLEYKLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGKKGVIVKEISNILVNKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 84 NPQIDVIDVSKIEAPEMFPKVIAYRIANAMAKGVRFRRVMFVAVRQLMEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RA+ K G + G + AV HVLL+ G+ GI+V+I
Sbjct: 144 GKLSTERARFEKLTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 192
>gi|340344786|ref|ZP_08667918.1| Ribosomal protein S3 [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519927|gb|EGP93650.1| Ribosomal protein S3 [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 251
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 8/189 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + + G+S E+ TP+ T + + TR V+G KG
Sbjct: 1 MSAVKNVIKDNYNMMLLKDYLRVAIKDAGFSHAEISKTPMGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRFKF--PENSV-ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
IRELT + FK P+ SV E+ +++ +C + L G A RRA
Sbjct: 61 GIRELTDKLATDFKLKNPQISVVEIAKPELSPSVMC-----NRMASHLERGTAFRRATMW 115
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
L+ IM++GA G ++ +SGKLR R+ K G + +G +D + HV G+
Sbjct: 116 TLKQIMDNGAMGVQITISGKLRGDRSAFEKHSAGILPRAGHHAEVIVDEDIAHVKTAMGL 175
Query: 182 LGIKVKIML 190
+GI+++I +
Sbjct: 176 IGIRIRIAI 184
>gi|257076565|ref|ZP_05570926.1| 30S ribosomal protein S3P [Ferroplasma acidarmanus fer1]
Length = 228
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+ + K++KFV+D + + E L E G+ G++++ TP T I + R V+G
Sbjct: 4 SDMMKEKKFVSDNIKKLLVTEYLQSENDSAGFGGMDMKRTPFGTNITLYVNRPGLVIGRH 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G +I+ +TS+++ ++ +E+ ++V N L ++ + L G R+A
Sbjct: 64 GSKIKAMTSILETKYGLESPQIEV--KEVENADLNPQVISKKIALSLEKGWNYRKAGNTT 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
LR I++ A+G + + GK+ +RA++ KF G + SG+P + + +L+ G +
Sbjct: 122 LRRIIDQHARGVLIRIGGKISGERARTQKFMYGEIKYSGEPARAGVITGYSVAMLKTGAI 181
Query: 183 GIKVKIMLEWDQKGKQGPTTPLPDLVTIH 211
GI V+++ + LPD ++I+
Sbjct: 182 GIYVRLLRQ---------DYHLPDEISIN 201
>gi|329765063|ref|ZP_08256647.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1]
gi|393796604|ref|ZP_10379968.1| 30S ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia BG20]
gi|329138440|gb|EGG42692.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 251
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 8/187 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + + G+S E+ TP T + + TR V+G KG
Sbjct: 1 MSAVKNVIKDNYNMMLLKDYLRVAIKDAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSV-ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
IRELT + F K P+ SV E+ +++ +C A R G A RRA
Sbjct: 61 GIRELTDKLATDFGLKNPQISVVEIDKPELSPSVMCNRMAAHLER-----GTAFRRATMW 115
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
L+ IME+GA G ++ +SGKLR R+ K G + +G +D + HV G+
Sbjct: 116 TLKQIMENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVDEDIAHVETAMGL 175
Query: 182 LGIKVKI 188
+GI+++I
Sbjct: 176 IGIRIRI 182
>gi|27734520|sp|Q8ZWI0.2|RS3_PYRAE RecName: Full=30S ribosomal protein S3
Length = 218
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 24 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNILTTKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 84 NPQIDVIDISKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQLMEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RA+ K G + G + AV HVLL+ G+ GI+V+I
Sbjct: 144 GKLSTERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 192
>gi|18312873|ref|NP_559540.1| 30S ribosomal protein S3 [Pyrobaculum aerophilum str. IM2]
gi|18160363|gb|AAL63722.1| ribosomal protein S3 [Pyrobaculum aerophilum str. IM2]
Length = 196
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 95/184 (51%), Gaps = 4/184 (2%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 2 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNILTTKLGVE 61
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 62 NPQIDVIDISKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQLMEAGAKGFEIVVS 121
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI---MLEWDQKG 196
GKL +RA+ K G + G + AV HVLL+ G+ GI+V+I L++ +
Sbjct: 122 GKLSTERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRIAPATLQYSDEY 181
Query: 197 KQGP 200
K P
Sbjct: 182 KIKP 185
>gi|68010962|ref|XP_670951.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56486681|emb|CAI03517.1| hypothetical protein PB301211.00.0 [Plasmodium berghei]
Length = 82
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQG 199
GKLRAQRAKSMKF+DG++IS+G+P ++++A R L QGVLGIKVKIML K G
Sbjct: 1 GKLRAQRAKSMKFRDGHLISTGEPSKRFVNTATRSAQLNQGVLGIKVKIMLPSAIDTKTG 60
Query: 200 PTTPLPDLVTI 210
+ LPD +++
Sbjct: 61 LPSILPDNISV 71
>gi|379004535|ref|YP_005260207.1| 30S ribosomal protein S3, eukaryotic/archaeal type [Pyrobaculum
oguniense TE7]
gi|375159988|gb|AFA39600.1| ribosomal protein S3, eukaryotic/archaeal type [Pyrobaculum
oguniense TE7]
Length = 220
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L +L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 24 IKEFLEYKLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSNILATKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R + E+GAKG E++VS
Sbjct: 84 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQLTEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RA+ K G + G + AV HVLL+ G+ GI+V+I
Sbjct: 144 GKLSTERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 192
>gi|13541161|ref|NP_110849.1| 30S ribosomal protein S3P [Thermoplasma volcanium GSS1]
gi|27734525|sp|Q97BX1.1|RS3_THEVO RecName: Full=30S ribosomal protein S3
gi|14324549|dbj|BAB59476.1| ribosomal protein small subunit S3 [Thermoplasma volcanium GSS1]
Length = 225
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
K+RKFV + V + E L +E G+ + ++ TP T I + R V+G +G ++
Sbjct: 2 KERKFVNEAVKRLLVYEYLVKETENAGFGKMSMKRTPFGTNITLYVNRPGLVIGRRGSKV 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
+++T ++K++ +E+ + V + L A+ + L G + R+A L+
Sbjct: 62 QQMTETLEKKYAIETPQIEV--KDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLKRT 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
+++GA+G + +SGK+ +RA+ KF G + SG+P ++ + L+ G+LG+ V
Sbjct: 120 IDAGARGVLIKISGKISGERARYQKFIYGNVKYSGEPGSKGMLVGFSTAKLKVGILGVTV 179
Query: 187 KIMLEWDQKGKQGPTTPLPDLVTIHPL 213
KI+ P LPD+ +I L
Sbjct: 180 KIL---------NPEYKLPDVFSISNL 197
>gi|374325617|ref|YP_005083814.1| 30S ribosomal protein S3 [Pyrobaculum sp. 1860]
gi|356640883|gb|AET31562.1| 30S ribosomal protein S3P [Pyrobaculum sp. 1860]
Length = 218
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L+ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 24 IKEFLEYRLSRYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNILTTKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 84 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQLMEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RA+ K G + G + AV H+LL+ G+ GI+V+I
Sbjct: 144 GKLSTERARFEKQTYGKLYKIGYDARNRVRRAVIHILLKPGIYGIEVRI 192
>gi|193084211|gb|ACF09875.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-136-D10]
Length = 400
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 18/228 (7%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVR----VTPVRTEIIIRATRTQNVL 59
++++ R FV V + E L +E G+ G+ T + T++ ++A R V+
Sbjct: 3 KVNQIRHFVDRNVERQLVREYLLKETERAGFGGLHFERAFDQTSICTKVTLQAERVGMVI 62
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
G +G+ I EL ++ F EN +L E++ N L A A L L G RRA
Sbjct: 63 GRRGKVINELQRRIRTDFNL-ENP-KLQVEEIENPALNAQVMASKLASALERGWYFRRAG 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
+ + ++E+GAKGC +I++GKL R ++ KF G++ G+ ++D +++
Sbjct: 121 HSSVLNVIEAGAKGCLIIIAGKLTGSRHRTEKFLKGHIKFCGETALTHMDVGQATAVVKL 180
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLP---DLVTIHPLKEEVYVAPATA 224
G +G V IM P T LP D+++ Y+APA A
Sbjct: 181 GTIGCTVAIM---------KPGTKLPHEVDIISRIDAGLGPYIAPAMA 219
>gi|407464758|ref|YP_006775640.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus sp. AR2]
gi|407047946|gb|AFS82698.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus sp. AR2]
Length = 262
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 8/187 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + + G+S E+ TPV T + + TR V+G KG
Sbjct: 1 MSAVKNVIKDNYNMMLLKDYLREAIKDAGFSHAEISKTPVGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSV-ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
IR LT + F K P+ SV E+ ++ +C + L G A RRA
Sbjct: 61 GIRALTDKLASDFGLKNPQISVVEIEKPELAPSVMC-----NRMASHLERGTAFRRATMW 115
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
L+ IME GA G ++ +SGKLR R+ K G + +G +D + HV G+
Sbjct: 116 TLKQIMEGGAMGVQITISGKLRGDRSAFEKHTQGILPRAGHHAEIVVDEDIAHVQTAMGL 175
Query: 182 LGIKVKI 188
+GI+++I
Sbjct: 176 IGIRIRI 182
>gi|145591005|ref|YP_001153007.1| 30S ribosomal protein S3 [Pyrobaculum arsenaticum DSM 13514]
gi|145282773|gb|ABP50355.1| SSU ribosomal protein S3P [Pyrobaculum arsenaticum DSM 13514]
Length = 222
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 26 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSNILATKLGVE 85
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R + E+GAKG E++VS
Sbjct: 86 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQLTEAGAKGFEIVVS 145
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RA+ K G + G + AV HVLL+ G+ GI+V+I
Sbjct: 146 GKLSTERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 194
>gi|172046048|sp|A4WIY8.2|RS3_PYRAR RecName: Full=30S ribosomal protein S3
Length = 220
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 24 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSNILATKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R + E+GAKG E++VS
Sbjct: 84 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQLTEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RA+ K G + G + AV HVLL+ G+ GI+V+I
Sbjct: 144 GKLSTERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 192
>gi|386876664|ref|ZP_10118757.1| ribosomal protein S3 [Candidatus Nitrosopumilus salaria BD31]
gi|386805532|gb|EIJ65058.1| ribosomal protein S3 [Candidatus Nitrosopumilus salaria BD31]
Length = 251
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 6/186 (3%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + + G+S E+ TPV T + + TR V+G KG
Sbjct: 1 MSAVKNVIKDNYNMMLLRDYLREAIKDAGFSHAEISKTPVGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
IR LT + F K P+ SV +++ L + L G A RRA
Sbjct: 61 GIRSLTEKLATDFGLKNPQISVV----EIDKPELAPSVMCNRMASHLERGTAFRRATMWT 116
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
L+ IME GA G ++ +SGKLR R+ K G + +G +D + HV G++
Sbjct: 117 LKQIMEGGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVDEDIAHVKTAMGLI 176
Query: 183 GIKVKI 188
GI+++I
Sbjct: 177 GIRIRI 182
>gi|407462398|ref|YP_006773715.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus koreensis AR1]
gi|407046020|gb|AFS80773.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus koreensis AR1]
Length = 251
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 8/187 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + E G+S E+ TP T + + TR V+G KG
Sbjct: 1 MSSVKNVIKDNYNMMLLKDYLREAIKEAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSV-ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
IR+LT + F K P+ SV E+ +++ +C + L G A RRA
Sbjct: 61 GIRDLTDKLATDFGLKNPQISVVEIEKPELSPSVMC-----NRMASHLERGTAFRRATMW 115
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
L+ IME+GA G ++ +SGKLR R+ K G + +G + + HV G+
Sbjct: 116 TLKQIMENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVAEDIAHVNTAMGL 175
Query: 182 LGIKVKI 188
+GI+++I
Sbjct: 176 IGIRIRI 182
>gi|16082264|ref|NP_394722.1| 30S ribosomal protein S3P [Thermoplasma acidophilum DSM 1728]
gi|27734534|sp|Q9HIR5.1|RS3_THEAC RecName: Full=30S ribosomal protein S3
gi|10640611|emb|CAC12389.1| probable 30S ribosomal protein S3 [Thermoplasma acidophilum]
Length = 225
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
K+RKF+ + V + E + +E G+ + ++ TP T I + R V+G +G ++
Sbjct: 2 KERKFINEAVKRLLVCEYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKV 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
+++T ++K++ +E+ + V + L A+ + L G + R+A L
Sbjct: 62 QQMTDTLEKKYGIETPQIEV--KDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLNRT 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
+++GAKG + +SGK+ +RA+ KF G + SG+P ++ + + L+ G+LG+ V
Sbjct: 120 IQAGAKGVLIKISGKISGERARYQKFIYGNVKYSGEPGSKGMITGFSTAKLKVGILGVTV 179
Query: 187 KIMLEWDQKGKQGPTTPLPDLVTIHPL 213
KI+ P LPD+ +I +
Sbjct: 180 KIL---------NPEYKLPDVFSIENI 197
>gi|291333640|gb|ADD93331.1| ribosomal protein S3 [uncultured archaeon MedDCM-OCT-S11-C441]
Length = 218
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 11/193 (5%)
Query: 23 EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
E L +E G+ G+ TP T++ +RA + V+G +G+ I +L +Q+ F +
Sbjct: 21 EFLLKETERAGFGGLNFNRTPEGTKVTLRAEQVGRVIGRRGKVIHDLQRRLQEDFDL--D 78
Query: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
+ +L E++ A A L L G RRA + ++ IM++GA+GC V +SGK+
Sbjct: 79 NPQLEVEEIEESRTNAQVMASRLASSLERGWFFRRAGHSTVQNIMDAGARGCIVTLSGKI 138
Query: 143 RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTT 202
R + KF+ G++ G+ + +D + + G +G V+IM P
Sbjct: 139 TGARHRVEKFQKGHIKYCGETALQLMDVGFSTAVKKLGTIGCTVRIMR---------PGA 189
Query: 203 PLPDLVTIHPLKE 215
LP +TI E
Sbjct: 190 KLPHEITIQERSE 202
>gi|20094278|ref|NP_614125.1| 30S ribosomal protein S3 [Methanopyrus kandleri AV19]
gi|27734506|sp|Q8TX35.1|RS3_METKA RecName: Full=30S ribosomal protein S3
gi|19887318|gb|AAM02055.1| Ribosomal protein S3 [Methanopyrus kandleri AV19]
Length = 227
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 106/207 (51%), Gaps = 10/207 (4%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+KFV G+ EL+E L EL GY G+ ++ P T+II R +G +GR IR
Sbjct: 12 KKFVQYGMLKTELDEYLEEELGRAGYGGMRLQRVPNATKIIAYVERPAIAIGRRGRNIRR 71
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ VQ+RF V + +++ + L A L L G+ RRA YG LR IM
Sbjct: 72 VEEEVQERFPL-LGRVSIEVKELPSPELNPRVVARRLASALERGIHFRRAAYGALRRIMN 130
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+GAKG +I+SGKL RA++ KF +G + G+P +EY+ + + G +G+ V+I
Sbjct: 131 AGAKGAMIILSGKLIGARARTEKFMEGAVKYCGEPGDEYMIEGYVQAVTKPGAIGVTVRI 190
Query: 189 MLEWDQKGKQGPTTPLPDLVTIHPLKE 215
M P LPD + I P +E
Sbjct: 191 MP---------PDVELPDELEIRPPEE 208
>gi|161528312|ref|YP_001582138.1| 30S ribosomal protein S3 [Nitrosopumilus maritimus SCM1]
gi|160339613|gb|ABX12700.1| ribosomal protein S3 [Nitrosopumilus maritimus SCM1]
Length = 251
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 8/187 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + E G+S E+ TP T + + TR V+G KG
Sbjct: 1 MSSVKNVIKDNYNMMLLKDYLRDAIKEAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSV-ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
IR+LT + F K P+ SV E+ +++ +C + L G A RRA
Sbjct: 61 GIRDLTDKLATDFGLKNPQISVVEIEKPELSPSVMC-----NRMASHLERGTAFRRATMW 115
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
L+ IME+GA G ++ +SGKLR R+ K G + +G + + HV G+
Sbjct: 116 TLKQIMENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVAEDIAHVGTAMGL 175
Query: 182 LGIKVKI 188
+GI+++I
Sbjct: 176 IGIRIRI 182
>gi|159041478|ref|YP_001540730.1| 30S ribosomal protein S3 [Caldivirga maquilingensis IC-167]
gi|157920313|gb|ABW01740.1| ribosomal protein S3- domain protein [Caldivirga maquilingensis
IC-167]
Length = 236
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 93/172 (54%), Gaps = 8/172 (4%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L + Y ++ T + T I+I A + ++G KG++++ L +++ +F
Sbjct: 25 IKEYLNIALTRNRYVDSIIQRTTLGTRIVIIAEKKNRIIGRKGQQVKALADILKSKFNLD 84
Query: 81 ENSVELYAE---KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVI 137
+++ E + N R L A+ A+++ G+ RRA LR + E+ +G EVI
Sbjct: 85 NVVIDVIQEPHPEYNAR-LVALRIADAM----AKGIRFRRAAIIALRQLQEANVQGAEVI 139
Query: 138 VSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
+SGKL +R++ K+ G +I +GQ E + AV VLL+ G+ ++V+++
Sbjct: 140 ISGKLTTERSRFEKYTTGIVIKAGQDALEKVQEAVIPVLLKPGIFSVRVRVL 191
>gi|432096999|gb|ELK27498.1| 40S ribosomal protein S3-B [Myotis davidii]
Length = 106
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 157 MISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
MI SG PVN D+AVRHVL R+GV G+KVKI L WD GK+GPT P PD V+I K+E
Sbjct: 1 MIRSGDPVNYDADTAVRHVLPRRGVRGLKVKITLPWDPSGKRGPTRPPPDHVSIVEPKDE 60
Query: 217 VYVAPATATS 226
P TA S
Sbjct: 61 ---RPPTAPS 67
>gi|296083024|emb|CBI22428.3| unnamed protein product [Vitis vinifera]
Length = 116
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
Query: 16 VFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQK 75
+ FA LNE+L R LA+DG SGVEVRV P+ TEIII AT+TQNVL ++GR REL + VQK
Sbjct: 11 IIFAGLNEMLVRRLAKDGGSGVEVRVIPMLTEIIIHATQTQNVLCKQGR--RELAARVQK 68
>gi|147827332|emb|CAN62175.1| hypothetical protein VITISV_001516 [Vitis vinifera]
Length = 1989
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Query: 13 ADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSV 72
+D FA LNE+L R LA+DG SGVEVRV P+ TEIII AT+TQNVL ++GR REL +
Sbjct: 547 SDVSIFAGLNEMLVRRLAKDGGSGVEVRVIPMLTEIIIHATQTQNVLCKQGR--RELAAR 604
Query: 73 VQK 75
VQK
Sbjct: 605 VQK 607
>gi|147838004|emb|CAN69383.1| hypothetical protein VITISV_017964 [Vitis vinifera]
Length = 286
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 39/46 (84%)
Query: 28 ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
++ EDGYS V+VRVTP+ EII+RATRTQN L EKGRRIRELT V+
Sbjct: 139 DILEDGYSNVKVRVTPMGMEIIVRATRTQNALSEKGRRIRELTLVM 184
>gi|374724270|gb|EHR76350.1| 30S ribosomal protein S3 / S3P [uncultured marine group II
euryarchaeote]
Length = 232
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 9/196 (4%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA + S R V V + E L + G+ +++R TP TE+ + A R V+G
Sbjct: 1 MAGKKSTLRTIVNRNVERHLVKEFLMQNTKRSGFGALDIRRTPQGTEVTVHAERPGMVIG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KG+ I EL + + F EN +L E++ L A AE + L G RRA
Sbjct: 61 RKGKIINELQKRLNEEFDL-ENP-KLKVEEIEKATLNAQVMAEKIASALERGWYHRRAGN 118
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHV----- 175
+ IM+SGA+G V ++GKL R ++ K+ G+ V ++A++H+
Sbjct: 119 SAAQNIMDSGARGVIVTLAGKLTGSRNRTEKYIRGHXXXXXXHVKYCGETALQHMDRGYS 178
Query: 176 --LLRQGVLGIKVKIM 189
+ + G +G+ V IM
Sbjct: 179 VAVKKLGTIGVTVAIM 194
>gi|118576057|ref|YP_875800.1| ribosomal protein S3 [Cenarchaeum symbiosum A]
gi|152060854|sp|A0RVX9.1|RS3_CENSY RecName: Full=30S ribosomal protein S3
gi|118194578|gb|ABK77496.1| ribosomal protein S3 [Cenarchaeum symbiosum A]
Length = 261
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 79/170 (46%), Gaps = 19/170 (11%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRF--K 78
L E L + + G+SGVEV P T+I + TR V+G KG IRELT ++K F K
Sbjct: 17 LREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFDLK 76
Query: 79 FPENSV------ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME-SGA 131
P+ V ELY + NR I + G A RRA ++ IME A
Sbjct: 77 SPQVDVKEIETPELYPGVMCNRMASHIER----------GTAFRRATMWTIQQIMEKKDA 126
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
G ++ +SGKLR R+ K G + +G + + V HV G+
Sbjct: 127 MGVQITISGKLRGDRSAFEKHTSGILPRAGHYADVIVLDDVVHVKTPMGL 176
>gi|154281921|ref|XP_001541773.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411952|gb|EDN07340.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 151
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 36/46 (78%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEII 49
ISK+RKFV GVF+A LN RELAE+GYSGVEVRVTP T+II
Sbjct: 84 DISKRRKFVVGGVFYAGLNGFFLRELAEEGYSGVEVRVTPTGTDII 129
>gi|170061554|ref|XP_001866283.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167879747|gb|EDS43130.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 271
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 34/41 (82%)
Query: 15 GVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRT 55
G+F AELNE LTR+L +GYSGVEVRVTP RTEIII AT T
Sbjct: 228 GMFLAELNEFLTRQLVANGYSGVEVRVTPTRTEIIIMATCT 268
>gi|41615265|ref|NP_963763.1| hypothetical protein NEQ481 [Nanoarchaeum equitans Kin4-M]
gi|40068989|gb|AAR39324.1| NEQ481 [Nanoarchaeum equitans Kin4-M]
Length = 236
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 2 ATQISKK--RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
A Q++ K RKF+ + E + L S V +R TP+ +II + R + +
Sbjct: 4 ALQMASKVIRKFIQNAKLTVFSQEFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMIS 63
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL-AVRRA 118
E R L +++ +F + +E+ + N L A AE L + + A RR
Sbjct: 64 EE---RKAHLAKLLELKFGLEKPVIEVLP--IENPNLDAHVIAERLAMGIERNIRAYRRL 118
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLR 178
L IM +GA G E++++G+L QR K+ +FK G + +G +D A L+
Sbjct: 119 AQRYLETIMNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTGTIGQFELDRAFNIAYLK 178
Query: 179 QGVLGIKVKIMLEWDQKGKQGPTTPLPDLV 208
GV GI V I+ P +PD++
Sbjct: 179 PGVAGIHVTIL---------KPDAEIPDII 199
>gi|170036208|ref|XP_001845957.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167878755|gb|EDS42138.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 281
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 35/46 (76%)
Query: 30 AEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQK 75
A D + VEV VT +RTEIII TRTQ VLGEKG IRELT+VVQK
Sbjct: 16 AADDFLSVEVHVTSIRTEIIIMTTRTQKVLGEKGHHIRELTAVVQK 61
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 178 RQGVLGIKVKIMLEWDQKGKQGPTTPLP-DLVTIHPLKEEVYVAPATATSIEL 229
R LG KIML WD GK P PLP +++ + P E ++ P T +++L
Sbjct: 79 RWSCLG---KIMLPWDPNGKIDPKEPLPENVLVVEPKDEIMHNTPGTKNNLKL 128
>gi|332105493|gb|AEE01378.1| ribosomal protein S3 [Bubalus bubalis]
Length = 34
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/34 (88%), Positives = 31/34 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGY 34
MA QISKKRKFVADG+F AELNE LTRELAEDGY
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGY 34
>gi|152060885|sp|Q74MZ4.2|RS3_NANEQ RecName: Full=30S ribosomal protein S3
Length = 230
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
RKF+ + E + L S V +R TP+ +II + R + + E R
Sbjct: 7 RKFIQNAKLTVFSQEFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMISEE---RKAH 63
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL-AVRRACYGVLRFIM 127
L +++ +F + +E+ + N L A AE L + + A RR L IM
Sbjct: 64 LAKLLELKFGLEKPVIEVLP--IENPNLDAHVIAERLAMGIERNIRAYRRLAQRYLETIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G E++++G+L QR K+ +FK G + +G +D A L+ GV GI V
Sbjct: 122 NAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTGTIGQFELDRAFNIAYLKPGVAGIHVT 181
Query: 188 IMLEWDQKGKQGPTTPLPDLV 208
I+ P +PD++
Sbjct: 182 IL---------KPDAEIPDII 193
>gi|161899235|ref|XP_001712844.1| ribosomal protein S3 [Bigelowiella natans]
gi|75756337|gb|ABA27232.1| ribosomal protein S3 [Bigelowiella natans]
Length = 262
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVR 173
+ R + LRF++ SG +GC + + G R++R K+ KF+ G + SG N++IDS
Sbjct: 156 SFRSIIFNTLRFLINSGVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNNDWIDSDSF 215
Query: 174 HVLLRQGVLGIKVKIM 189
++ ++G LGI +KIM
Sbjct: 216 YLNKKRGTLGINIKIM 231
>gi|328951230|ref|YP_004368565.1| 30S ribosomal protein S3 [Marinithermus hydrothermalis DSM 14884]
gi|328451554|gb|AEB12455.1| ribosomal protein S3 [Marinithermus hydrothermalis DSM 14884]
Length = 247
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 5/171 (2%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E++TRE+ G + +++ + + A + ++G G I+ + + +QKRF P
Sbjct: 39 IRELITREVYHGGIARIDIERAADNVSVTVHAAKPGVIIGRGGETIKRMRAELQKRF--P 96
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
++ L ++V N L A A+ + ++ AVRRA ++ +ME+GA+G +V+VSG
Sbjct: 97 NRTISLNVQEVPNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMEAGAQGAKVVVSG 156
Query: 141 KL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
++ A++A++ G + N ID GVLG+K I L
Sbjct: 157 RIGGAEQARTEWAALGRVPLHTLRAN--IDYGFALAWTTYGVLGVKAYIFL 205
>gi|408843732|ref|YP_169380.2| 30S ribosomal protein S3, partial [Francisella tularensis subsp.
tularensis SCHU S4]
gi|408843735|ref|YP_666512.2| 30S ribosomal protein S3, partial [Francisella tularensis subsp.
tularensis FSC198]
Length = 220
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R+ V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D A L GV+G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYATAEALTTYGVIGVKVWI 202
>gi|379716674|ref|YP_005305010.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
TIGB03]
gi|379716752|ref|YP_005305088.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725356|ref|YP_005317542.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
TI0902]
gi|385794093|ref|YP_005830499.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
NE061598]
gi|421754959|ref|ZP_16191917.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
80700075]
gi|61215376|sp|Q5NHW2.1|RS3_FRATT RecName: Full=30S ribosomal protein S3
gi|123063579|sp|Q14JB4.1|RS3_FRAT1 RecName: Full=30S ribosomal protein S3
gi|56603976|emb|CAG44964.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110320288|emb|CAL08347.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
FSC198]
gi|282158628|gb|ADA78019.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
NE061598]
gi|377826805|gb|AFB80053.1| SSU ribosomal protein S3p (S3e) [Francisella tularensis subsp.
tularensis TI0902]
gi|377828351|gb|AFB78430.1| SSU ribosomal protein S3p (S3e) [Francisella tularensis subsp.
tularensis TIGB03]
gi|377828429|gb|AFB78508.1| SSU ribosomal protein S3p (S3e) [Francisella tularensis subsp.
tularensis TIGB03]
gi|409089503|gb|EKM89543.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
80700075]
Length = 222
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R+ V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D A L GV+G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYATAEALTTYGVIGVKVWI 202
>gi|225621034|ref|YP_002722292.1| 30S ribosomal protein S3 [Brachyspira hyodysenteriae WA1]
gi|225215854|gb|ACN84588.1| 30S ribosomal protein S3 [Brachyspira hyodysenteriae WA1]
Length = 202
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 27 RELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R I I R V+G KG+R+ + + VQK K P V
Sbjct: 19 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTTVQKMVKKP---VHF 75
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ + L A A+S+ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 76 SITEIRDAELDANLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 135
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKG 196
A++ ++K+G + N ID L G++GIKV W KG
Sbjct: 136 IARTEQYKNGSVPLHTLRAN--IDYGTAEALTTFGIIGIKV-----WIYKG 179
>gi|384210006|ref|YP_005595726.1| 30S ribosomal protein S3 [Brachyspira intermedia PWS/A]
gi|343387656|gb|AEM23146.1| ribosomal protein S3 [Brachyspira intermedia PWS/A]
Length = 245
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 27 RELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R I I R V+G KG+R+ + + VQK K P V
Sbjct: 62 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTTVQKMVKKP---VHF 118
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ + L A A+S+ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 119 SITEIRDAELDANLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 178
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
A++ ++K+G + N ID L G++GIKV I
Sbjct: 179 IARTEQYKNGSVPLHTLRAN--IDYGTAEALTTFGIIGIKVWI 219
>gi|118496858|ref|YP_897908.1| 30S ribosomal protein S3 [Francisella novicida U112]
gi|385792181|ref|YP_005825157.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|387823814|ref|YP_005823285.1| 30S ribosomal protein S3 [Francisella cf. novicida 3523]
gi|152060861|sp|A0Q4I9.1|RS3_FRATN RecName: Full=30S ribosomal protein S3
gi|118422764|gb|ABK89154.1| 30S ribosomal protein S3 [Francisella novicida U112]
gi|328675413|gb|AEB28088.1| SSU ribosomal protein S3p (S3e) [Francisella cf. novicida 3523]
gi|328676327|gb|AEB27197.1| SSU ribosomal protein S3p (S3e) [Francisella cf. novicida Fx1]
Length = 223
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARPGIVIGKKGEDVEKLRAEVHKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D A L GV+G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYATAEALTTYGVIGVKVWI 202
>gi|445062113|ref|ZP_21374548.1| 30S ribosomal protein S3 [Brachyspira hampsonii 30599]
gi|444506508|gb|ELV06835.1| 30S ribosomal protein S3 [Brachyspira hampsonii 30599]
Length = 245
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 27 RELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R I I R V+G KG+R+ + + VQK K P V
Sbjct: 62 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTTVQKMVKKP---VHF 118
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ + L A A+++ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 119 SITEIRDAELDATLAAQNVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 178
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
A++ ++K+G + N ID L G++GIKV I
Sbjct: 179 IARTEQYKNGSVPLHTLRAN--IDYGTAEALTTFGIIGIKVWI 219
>gi|89255676|ref|YP_513037.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
LVS]
gi|115314177|ref|YP_762900.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
OSU18]
gi|134302579|ref|YP_001122550.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156501626|ref|YP_001427691.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|254368628|ref|ZP_04984643.1| hypothetical protein FTAG_01721 [Francisella tularensis subsp.
holarctica FSC022]
gi|290953206|ref|ZP_06557827.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
URFT1]
gi|421752464|ref|ZP_16189489.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
AS_713]
gi|421754330|ref|ZP_16191305.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
831]
gi|421758061|ref|ZP_16194921.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
80700103]
gi|421759892|ref|ZP_16196716.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
70102010]
gi|422938172|ref|YP_007011319.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
FSC200]
gi|423049986|ref|YP_007008420.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
F92]
gi|424675214|ref|ZP_18112123.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
70001275]
gi|122325782|sp|Q0BNS1.1|RS3_FRATO RecName: Full=30S ribosomal protein S3
gi|123094541|sp|Q2A5G4.1|RS3_FRATH RecName: Full=30S ribosomal protein S3
gi|152060862|sp|A4IZS8.1|RS3_FRATW RecName: Full=30S ribosomal protein S3
gi|189045009|sp|A7N9T2.1|RS3_FRATF RecName: Full=30S ribosomal protein S3
gi|89143507|emb|CAJ78683.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
LVS]
gi|115129076|gb|ABI82263.1| ribosomal protein S3 [Francisella tularensis subsp. holarctica
OSU18]
gi|134050356|gb|ABO47427.1| ribosomal protein S3 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156252229|gb|ABU60735.1| ribosomal protein S3 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|157121536|gb|EDO65721.1| hypothetical protein FTAG_01721 [Francisella tularensis subsp.
holarctica FSC022]
gi|407293323|gb|AFT92229.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
FSC200]
gi|409084854|gb|EKM85015.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
831]
gi|409085048|gb|EKM85201.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
AS_713]
gi|409089809|gb|EKM89841.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
70102010]
gi|409090631|gb|EKM90644.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
80700103]
gi|417434163|gb|EKT89131.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
70001275]
gi|421950708|gb|AFX69957.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
F92]
Length = 223
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARPGIVIGKKGEDVEKLRAEVHKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D A L GV+G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYATAEALTTYGVIGVKVWI 202
>gi|429123826|ref|ZP_19184358.1| 30S ribosomal protein S3 [Brachyspira hampsonii 30446]
gi|426280395|gb|EKV57410.1| 30S ribosomal protein S3 [Brachyspira hampsonii 30446]
Length = 245
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 27 RELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R I I R V+G KG+R+ + + VQK K P V
Sbjct: 62 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTAVQKMVKKP---VHF 118
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ + L A A+++ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 119 SITEIRDAELDATLAAQNVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 178
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
A++ ++K+G + N ID L G++GIKV I
Sbjct: 179 IARTEQYKNGSVPLHTLRAN--IDYGTAEALTTFGIIGIKVWI 219
>gi|187932137|ref|YP_001892122.1| 30S ribosomal protein S3 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|226697715|sp|B2SDX9.1|RS3_FRATM RecName: Full=30S ribosomal protein S3
gi|187713046|gb|ACD31343.1| 30S ribosomal protein S3 [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 223
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARPGIVIGKKGDDVEKLRAEVHKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D A L GV+G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYATAEALTTYGVIGVKVWI 202
>gi|337754255|ref|YP_004646766.1| 30S ribosomal protein S3 [Francisella sp. TX077308]
gi|336445860|gb|AEI35166.1| SSU ribosomal protein S3p (S3e) [Francisella sp. TX077308]
Length = 222
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R V+G+KG + +L S V K
Sbjct: 38 KVREFLHKKLASAAVSKIQIERPAQNAKITIHTARPGIVIGKKGEDVEKLRSDVNKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A A+S+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVADSVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D + L G++G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYSTAQALTTYGIIGVKVWI 202
>gi|167626800|ref|YP_001677300.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254875930|ref|ZP_05248640.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|167596801|gb|ABZ86799.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254841951|gb|EET20365.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 222
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLASAAVSKIQIERPAQNAKITIHTARPGIVIGKKGEDVEKLRADVNKLMGV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A A+S+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVADSVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D A L G++G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYATSKALTTYGIIGVKVWI 202
>gi|387885959|ref|YP_006316258.1| 30S ribosomal protein S3 [Francisella noatunensis subsp. orientalis
str. Toba 04]
gi|386870775|gb|AFJ42782.1| 30S ribosomal protein S3 [Francisella noatunensis subsp. orientalis
str. Toba 04]
Length = 222
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARPGIVIGKKGEDVEKLRADVNKLMGV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A A+S+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVADSVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D A L G++G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYATSKALTTYGIIGVKVWI 202
>gi|147795005|emb|CAN71930.1| hypothetical protein VITISV_040426 [Vitis vinifera]
Length = 414
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 37/47 (78%)
Query: 28 ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQ 74
++ EDGYS ++V+VT + EIIIRAT+TQN L E GR++RELT V +
Sbjct: 238 DIPEDGYSDIKVKVTGMCMEIIIRATQTQNALIENGRKMRELTLVTR 284
>gi|313680509|ref|YP_004058248.1| 30S ribosomal protein S3 [Oceanithermus profundus DSM 14977]
gi|313153224|gb|ADR37075.1| SSU ribosomal protein S3P [Oceanithermus profundus DSM 14977]
Length = 247
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E++ E+A G + +++ + + A + ++G G I+ + + +QK F
Sbjct: 38 KVRELIENEVAHGGIARIDIERAADNLSVTVHAAKPGVIIGRGGETIKRMRAELQK--MF 95
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P ++ L ++V N L A A+ + ++ AVRRA ++ ++ESGA+G +V+VS
Sbjct: 96 PNRTIALNVQEVGNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVVESGAQGAKVVVS 155
Query: 140 GKL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
G++ A++A++ DG + N ID GVLG+K I
Sbjct: 156 GRIGGAEQARTEWSSDGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYIF 204
>gi|290559289|gb|EFD92626.1| KH type 2 domain protein [Candidatus Parvarchaeum acidophilus
ARMAN-5]
Length = 223
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K + D V E L ++ G S +++ TP+ +III+ + ++ + +RE
Sbjct: 4 KKIITDKVNEESAREYLFKKFNRFGISDIKIEKTPLGMKIIIKTPKPGAIITRANQILRE 63
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ + + FK +E+ N IA + + + G + + + + IM
Sbjct: 64 SSKDLGEFFKQESPRIEVENSLDPNLDPAIIADSIAFKIAKFGPMKYKVVIHKAMDSIMA 123
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFK--DGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
+GAKG E+ + G ++ +RA KF+ M +GQ + +A + ++L++G +GIKV
Sbjct: 124 AGAKGVEIEIGGVIK-ERAAHFKFRPIGSVMPKTGQVEFFGVRTAKKQLVLKRGSIGIKV 182
Query: 187 KIMLEWDQKG 196
I++ + G
Sbjct: 183 TIVVPTETVG 192
>gi|452994637|emb|CCQ93744.1| ribosomal protein S3 (BS3) [Clostridium ultunense Esp]
Length = 221
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 18/189 (9%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
++ A+ F A L+E L +LA+ G S +E+ R + + + V+G+ G
Sbjct: 21 RWYAEKDFAALLHEDLKIRKFLEEKLADAGISHIEIERAANRLNLTLHTAKPGMVIGKGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ I L + + K + V + ++ L A AES+ +L ++ RRA +
Sbjct: 81 QEIENLRNAISK---MTDKKVHINVNEIKKPDLDAKLVAESIAKQLENRVSFRRAMKQAM 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQ 179
+ +M +GAKG +V VSG+L A+ A++ + +G + P++ ID A+
Sbjct: 138 QRVMRAGAKGVKVAVSGRLGGAEIARTEGYSEGTV-----PLHTLRADIDFAIEEAHTTY 192
Query: 180 GVLGIKVKI 188
GV+G+KV I
Sbjct: 193 GVIGVKVWI 201
>gi|406965930|gb|EKD91514.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 213
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 9/185 (4%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
K +F+ + + ++ EVL ++L G S +E+ + +III R ++G G +
Sbjct: 28 KYHQFLGEDI---KIREVLMKKLRPAGISNIEIERAINKLKIIIFVARPGVLIGRGGAGL 84
Query: 67 RELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
EL + K K E S+E+ V N + A A+++ +L L R L
Sbjct: 85 TELKKFIMKTLKIKEEGSLEIVPMDVKNPDMSAYLVAQNIAEQLARRLPAARVMNQSLDR 144
Query: 126 IMESGAKGCEVIVSGKLRAQRA--KSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLG 183
+M +GAKG +V+VSG++ + KF + + + ID AV L + G +G
Sbjct: 145 VMNAGAKGVKVVVSGRIGGAEIARRESKFAGSIPLHT---LRADIDFAVYPALTKSGYVG 201
Query: 184 IKVKI 188
+KV I
Sbjct: 202 VKVWI 206
>gi|269986910|gb|EEZ93186.1| KH type 2 domain protein [Candidatus Parvarchaeum acidiphilum
ARMAN-4]
Length = 223
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 92/190 (48%), Gaps = 3/190 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K VA+ V E L ++ + G S + + TP+ +I+I+ + ++ + +RE
Sbjct: 4 KKIVANRVNDETAREYLFKKFSRFGISDIRIEKTPLGMKIVIKTPKPGAIITRANQILRE 63
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ + + F +E+ + N +A + + + G + + + + IM
Sbjct: 64 SSKELGEYFNQESPRIEVEGSQDPNLDPAIVADSIAFKIAKYGPMKYKVVAHKAMDSIMS 123
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFK--DGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
+GA+G E+ + G ++ +RA KF+ M +GQ + SA + ++L++G +GIKV
Sbjct: 124 AGARGVEIEIGGVIK-ERAAHFKFRPTGSVMPKTGQVEFFGVRSAKKQLVLKRGSIGIKV 182
Query: 187 KIMLEWDQKG 196
I++ + G
Sbjct: 183 TIVVPTENIG 192
>gi|384438867|ref|YP_005653591.1| hypothetical protein [Thermus sp. CCB_US3_UF1]
gi|359290000|gb|AEV15517.1| hypothetical protein TCCBUS3UF1_4690 [Thermus sp. CCB_US3_UF1]
Length = 239
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 6/171 (3%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ EVLT+EL G + +++ + + + V+G G +I+ L + K
Sbjct: 39 IREVLTKELYPAGLARIDIERAADNVAVTVHVAKPGVVIGRGGEKIKVLRDTLAK---LT 95
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V L ++++N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG
Sbjct: 96 GKNVALNVQEIHNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSG 155
Query: 141 KL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
++ A++A++ +G + N ID GVLG+K + L
Sbjct: 156 RIGGAEQARTEWAAEGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYVFL 204
>gi|303233154|ref|ZP_07319827.1| ribosomal protein S3 [Atopobium vaginae PB189-T1-4]
gi|302480739|gb|EFL43826.1| ribosomal protein S3 [Atopobium vaginae PB189-T1-4]
Length = 236
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 8/188 (4%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + L + LA+ S VE+ + ++ I +R V+G+KG I +L + VQ+
Sbjct: 38 EIRKYLKKRLAKAALSRVEIERAGDKVKVSILTSRPGIVIGKKGGEIDDLRNDVQRIAGL 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P+ SV + ++ L A A+ + +L G +A RRA ++ ++GAKG + S
Sbjct: 98 PKGSVHVEVVEIKQPDLDAQLTADRIAEQLEGRVAFRRAVRKAVQAATKAGAKGIRIQCS 157
Query: 140 GKLRAQRAKSMKF-KDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQ 198
G+L +++ ++G + + ID A G +GIKV I L G++
Sbjct: 158 GRLNGAEMGRVEWSREGRVPL--HTLRAKIDFATATASTTMGAVGIKVWIYL-----GEK 210
Query: 199 GPTTPLPD 206
P P P+
Sbjct: 211 LPGQPAPN 218
>gi|327243123|gb|AEA41162.1| ribosomal protein S3 [Metacarcinus magister]
Length = 31
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 28/31 (90%)
Query: 33 GYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
GYSGV+VR TP RTEIII ATRTQNVLGEKG
Sbjct: 1 GYSGVQVRHTPARTEIIILATRTQNVLGEKG 31
>gi|296126871|ref|YP_003634123.1| 30S ribosomal protein S3 [Brachyspira murdochii DSM 12563]
gi|296018687|gb|ADG71924.1| ribosomal protein S3 [Brachyspira murdochii DSM 12563]
Length = 245
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 27 RELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R I I R V+G KG+R+ + + VQK K P V
Sbjct: 62 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTAVQKMVKKP---VHF 118
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ + L A A+S+ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 119 SITEIRDAELDAALAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 178
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
A++ ++K+G + N ID L G++GIKV I
Sbjct: 179 IARTEQYKNGSVPLHTLRAN--IDYGTAEALTTFGIIGIKVWI 219
>gi|300870641|ref|YP_003785512.1| 30S ribosomal protein S3 [Brachyspira pilosicoli 95/1000]
gi|404475011|ref|YP_006706442.1| 30S ribosomal protein S1 [Brachyspira pilosicoli B2904]
gi|431808531|ref|YP_007235429.1| 30S ribosomal protein S3 [Brachyspira pilosicoli P43/6/78]
gi|434383116|ref|YP_006704899.1| 30S ribosomal protein S3 [Brachyspira pilosicoli WesB]
gi|300688340|gb|ADK31011.1| 30S ribosomal protein S3 [Brachyspira pilosicoli 95/1000]
gi|404431765|emb|CCG57811.1| 30S ribosomal protein S3 [Brachyspira pilosicoli WesB]
gi|404436500|gb|AFR69694.1| 30S ribosomal protein S1 [Brachyspira pilosicoli B2904]
gi|430781890|gb|AGA67174.1| 30S ribosomal protein S3 [Brachyspira pilosicoli P43/6/78]
Length = 245
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 6/163 (3%)
Query: 27 RELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R + I R V+G KG+R+ + + VQK K P N +
Sbjct: 62 KESFDPAISDIQIVRFPDRINVFISTARVGVVVGPKGQRVEAVKAAVQKLVKKPIN---V 118
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ L A A+S+ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 119 SISEIKEAELDATLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 178
Query: 146 RAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
A++ ++K+G + + ID G++G+KV I
Sbjct: 179 IARTEQYKNGSV--PLHTIRANIDYGTAEASTTFGIIGVKVWI 219
>gi|410696291|gb|AFV75359.1| ribosomal protein S3, bacterial type [Thermus oshimai JL-2]
Length = 239
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 9/187 (4%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E LT+EL G + +++ + + + V+G G +I+ L + K
Sbjct: 39 IREFLTKELYPAGLARIDIERAADNVAVTVHVAKPGVVIGRGGEKIKVLRDQLSK---LT 95
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V L ++++N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG
Sbjct: 96 GKNVALNVQEIHNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSG 155
Query: 141 KL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLE---WDQKG 196
++ A++A++ +G + N ID GVLG+K + L QK
Sbjct: 156 RIGGAEQARTEWAAEGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYVFLGEVIGGQKS 213
Query: 197 KQGPTTP 203
K P P
Sbjct: 214 KARPEAP 220
>gi|218294760|ref|ZP_03495614.1| ribosomal protein S3 [Thermus aquaticus Y51MC23]
gi|218244668|gb|EED11192.1| ribosomal protein S3 [Thermus aquaticus Y51MC23]
Length = 239
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ + LT+EL G + V++ + + + V+G G +I+ L + K
Sbjct: 38 QIRDYLTKELYPAGLARVDIERAADNVAVSVHVAKPGVVIGRGGEKIKVLRDALAK---L 94
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+V L ++++N L A A+ + ++ AVRRA ++ +MESGAKG +VIVS
Sbjct: 95 TGKNVALNVQEIHNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
G++ A++A++ +G + Q + ID GVLG+K + L
Sbjct: 155 GRIGGAEQARTEWAAEGRVPL--QTLRANIDYGFALARTTYGVLGVKAYVFL 204
>gi|62263397|gb|AAX78158.1| unknown protein [synthetic construct]
Length = 224
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R+ V+G+KG + +L + V K
Sbjct: 64 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGI 123
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 124 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 180
Query: 140 GKL-RAQRAKSMKFKDG 155
G+L A+ A+S +DG
Sbjct: 181 GRLGGAEIARSEWARDG 197
>gi|406994551|gb|EKE13532.1| hypothetical protein ACD_13C00010G0018 [uncultured bacterium]
Length = 217
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 1 MATQISKKRKFVADGVFFA-------ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRAT 53
+ T + K ++ AD F ++ E LT++L G +GVE+ P +II +
Sbjct: 12 VGTFLPWKSRWFADSASFKNFLIEDIKIREELTKKLKLAGVTGVEIERLPKSMVVIITVS 71
Query: 54 RTQNVLGEKGRRIRELTSVVQK------RFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
R V+G G I ++ + K + + +++ +V N L A A+ +
Sbjct: 72 RPGVVIGHGGTGIEDVKKFILKIMSDVRKKAVKDIKIDIRINEVKNPELSAYLVADRIAG 131
Query: 108 KLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNE 166
++ + RRA + +M GA G +V+++G++ A+ ++ F +G + Q + E
Sbjct: 132 EMERRIPHRRAVQKAIERVMAGGALGIKVVLAGRINGAEISRVETFHEGSV--PAQTLRE 189
Query: 167 YIDSAVRHVLLRQGVLGIKVKI 188
ID A LL++G +G+KV I
Sbjct: 190 NIDYAQIPALLKRGYVGVKVWI 211
>gi|406881487|gb|EKD29536.1| 30S ribosomal protein S3 [uncultured bacterium (gcode 4)]
Length = 210
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 42 TPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQ 101
T T I+I ++T VLG+ G + +L +QK F + ++V L A
Sbjct: 60 TDSETSIVIYTSKTAFVLGKNGENLTKLEEEIQKNF---PGKYAIEVKEVKKPELSASLV 116
Query: 102 AESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISS 160
A+S+ ++ L RR L ME G G +VI+SG+L A+ A++ +KDG +
Sbjct: 117 ADSIARQIEKKLPYRRVVKNALVKTMEKGGLGIKVILSGRLNGAEIARTETYKDGAI--P 174
Query: 161 GQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKG 196
Q + ID ++ GV+G+KV W KG
Sbjct: 175 RQTIRSDIDYSIERANTIYGVIGMKV-----WIYKG 205
>gi|320451294|ref|YP_004203390.1| 30S ribosomal protein S3 [Thermus scotoductus SA-01]
gi|320151463|gb|ADW22841.1| 30S ribosomal protein S3 [Thermus scotoductus SA-01]
Length = 239
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 9/187 (4%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ EVLT+EL G + +++ + + + V+G G +I+ L + +
Sbjct: 39 IREVLTKELYPAGLARIDIERAADNVAVTVHVAKPGVVIGRGGEKIKVLRDTLSQ---LT 95
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V L ++++N L A A+ + ++ AVRRA ++ +ME+GAKG +VIVSG
Sbjct: 96 GKNVALNVQEIHNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMEAGAKGAKVIVSG 155
Query: 141 KL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLE---WDQKG 196
++ A++A++ +G + N ID GVLG+K + L QK
Sbjct: 156 RIGGAEQARTEWAAEGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYVFLGEVIGGQKP 213
Query: 197 KQGPTTP 203
K P P
Sbjct: 214 KARPEGP 220
>gi|320160420|ref|YP_004173644.1| 30S ribosomal protein S3 [Anaerolinea thermophila UNI-1]
gi|319994273|dbj|BAJ63044.1| 30S ribosomal protein S3 [Anaerolinea thermophila UNI-1]
Length = 225
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 89/178 (50%), Gaps = 12/178 (6%)
Query: 25 LTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
L RE+AE+ G S VEV P + +I+ + ++G KG +++L ++
Sbjct: 42 LVREIAENAGVSRVEVERFPGKVRVIVFTAKPGILIGRKGESVKKLRQDLEA---LTGKK 98
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR 143
++L +++ N A+ AE+L ++ ++ RRA L+ M GAKG +V V G+L
Sbjct: 99 IDLEIKEIKNPDTDALLVAENLASQIERRVSYRRAMKRALQQAMRQGAKGIKVEVQGRLS 158
Query: 144 -AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGP 200
A+ ++S+ ++G + Q + ID A L G +G+KV W KG+ P
Sbjct: 159 GAEMSRSVWLREGRV--PLQTLRADIDFARAEALTTYGRIGVKV-----WVYKGEMAP 209
>gi|406875985|gb|EKD25679.1| ribosomal protein S3 [uncultured bacterium (gcode 4)]
Length = 222
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 18/186 (9%)
Query: 17 FFAELNEVLTRELAED-----GYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
FF E +V R+ +D G S V +R T EIII +++ ++G++ +I+E
Sbjct: 33 FFVE--DVKMRKFVDDTFGRSGISKVIIRKTAKEWEIIIFSSKVGVLMGKQWEKIKEFEE 90
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
++K+F +++ ++V L A AE + +L + R+ VL+ +ME A
Sbjct: 91 ALKKKF---NKDMKVVIKEVKIPELSAKIMAEFIASQLEARMPFRKVAKNVLQKVMEKWA 147
Query: 132 KGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
G ++ V G+L ++S KF +G + S Q ID + G+LG+KV
Sbjct: 148 AGIKIQVGGRLGWVDISRSEKFIEGRV--SLQTFRSDIDFYYLQARTKYGMLGVKV---- 201
Query: 191 EWDQKG 196
W +KG
Sbjct: 202 -WIEKG 206
>gi|384938265|ref|ZP_10029957.1| 30S ribosomal protein S3 [Mycoplasma canis UF31]
gi|419704931|ref|ZP_14232475.1| 30S ribosomal protein S3 [Mycoplasma canis UF33]
gi|419705576|ref|ZP_14233114.1| 30S ribosomal protein S3 [Mycoplasma canis UFG1]
gi|419706225|ref|ZP_14233756.1| 30S ribosomal protein S3 [Mycoplasma canis UFG4]
gi|384392919|gb|EIE39372.1| 30S ribosomal protein S3 [Mycoplasma canis UF33]
gi|384393226|gb|EIE39677.1| 30S ribosomal protein S3 [Mycoplasma canis UF31]
gi|384394879|gb|EIE41313.1| 30S ribosomal protein S3 [Mycoplasma canis UFG1]
gi|384395030|gb|EIE41463.1| 30S ribosomal protein S3 [Mycoplasma canis UFG4]
Length = 216
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 45 RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAES 104
+ ++I + VLG++G+ I+ELT+ +QK K +V L ++ L A AE
Sbjct: 64 KVTVLIHTVKPAAVLGQEGKNIQELTTKLQKFVKNRHLNVNLQVLELKKPDLNAKLLAEM 123
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYMISSGQP 163
+ KL + R A +R M++GAKG + +VSG+L A+S + +G M
Sbjct: 124 IATKLENRESFRSAQKIAIRLAMKAGAKGIKTMVSGRLNGVDMARSEGYSEGEM--KLHT 181
Query: 164 VNEYIDSAVRHVLLRQGVLGIKVKIML 190
+ + +D A G +GIKV + L
Sbjct: 182 LRQDVDYATATARTTYGAIGIKVWVSL 208
>gi|419704283|ref|ZP_14231833.1| 30S ribosomal protein S3 [Mycoplasma canis PG 14]
gi|384393071|gb|EIE39523.1| 30S ribosomal protein S3 [Mycoplasma canis PG 14]
Length = 216
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 45 RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAES 104
+ ++I + VLG++G+ I+ELT+ +QK K +V L ++ L A AE
Sbjct: 64 KVTVLIHTVKPAAVLGQEGKNIQELTTKLQKFVKNRHLNVNLQVLELKKPDLNAKLLAEM 123
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYMISSGQP 163
+ KL + R A +R M++GAKG + +VSG+L A+S + +G M
Sbjct: 124 IAAKLENRESFRSAQKIAIRLAMKAGAKGIKTMVSGRLNGVDMARSEGYSEGEM--KLHT 181
Query: 164 VNEYIDSAVRHVLLRQGVLGIKVKIML 190
+ + +D A G +GIKV + L
Sbjct: 182 LRQDVDYATATARTTYGAIGIKVWVSL 208
>gi|297567278|ref|YP_003686250.1| 30S ribosomal protein S3 [Meiothermus silvanus DSM 9946]
gi|296851727|gb|ADH64742.1| ribosomal protein S3 [Meiothermus silvanus DSM 9946]
Length = 250
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ ++ +ELA G + +++ + + A + V+G G I+ L +Q KF
Sbjct: 38 QIRSLIEKELAPAGLARIDIERAADNVAVTVYAAKPGVVIGRGGETIKRLRETLQN--KF 95
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P +V L ++V N L A A+ + ++ AVRRA ++ I ESGA G +++VS
Sbjct: 96 PGKTVALNVQEVGNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRIRESGALGAKIVVS 155
Query: 140 GKL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
G++ A++A++ +G + N +D G LG+KV + +
Sbjct: 156 GRIGGAEQARTEWAAEGRVPLHTLRAN--LDYGTARAETTYGSLGVKVYVFM 205
>gi|406994603|gb|EKE13584.1| hypothetical protein ACD_13C00010G0070 [uncultured bacterium]
Length = 217
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 1 MATQISKKRKFVADGVFFAE-------LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRAT 53
+ T + K ++ AD F + + + LT++L G +GVE+ +P + I +
Sbjct: 12 IGTFLPWKSRWFADNNSFKQFLIEDIRIRKELTKKLKLAGITGVEIERSPKSIVVTITVS 71
Query: 54 RTQNVLGEKGRRIRE--------LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 105
R V+G G I + + V +K K + +++ +V + L A AE +
Sbjct: 72 RPGVVIGRGGTGIEDVKKYILGIMNDVRKKTVK--DLKIDIRINEVKSPELSAYLVAERI 129
Query: 106 RYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPV 164
++ + RRA + +M SGA G +V+++G++ A+ ++ KF G + S Q +
Sbjct: 130 VSEMERRIPHRRAVQKAIERVMASGALGIKVVLAGRINGAEISRVEKFHQGSVPS--QTL 187
Query: 165 NEYIDSAVRHVLLRQGVLGIKVKI 188
E ID A LL++G +G+KV I
Sbjct: 188 RENIDYAQVPALLKRGYVGVKVWI 211
>gi|170060367|ref|XP_001865771.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167878835|gb|EDS42218.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 225
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 157 MISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEE 216
+ S P N Y+D+A HVLLR GVLG+ VK ML WD K + PL D ++ L
Sbjct: 111 VFSVPNPCNVYVDTATHHVLLRPGVLGVMVKTMLLWDAKVNK----PLSDNISKRRLVAS 166
Query: 217 VYVAPATATSIE 228
+++ + S+E
Sbjct: 167 IHLVHLLSGSLE 178
>gi|406910928|gb|EKD50831.1| hypothetical protein ACD_62C00417G0009 [uncultured bacterium]
Length = 209
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 6/170 (3%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
+++ + L G S +E+ + +I I +R V+G+KG I +L + +QK
Sbjct: 37 NFRKIIKKNLYSMGVSHIEMERAATKLKITIHTSRPGLVIGKKGSGIDQLRNDLQK---L 93
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+N V L ++V L A AE++ +L +A RRA ++ M+ GA+G +V+ S
Sbjct: 94 TKNQVFLNIQEVRKAELDAQLVAENIALQLERRVAFRRAMKKSVQTTMKFGARGIKVMCS 153
Query: 140 GKLR-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+ +++G + N ID L G++G++V I
Sbjct: 154 GRLAGAEIARREWYREGQVPLHTLRAN--IDYGFAEALTTYGIIGVRVWI 201
>gi|184155985|ref|YP_001844325.1| 30S ribosomal protein S3 [Lactobacillus fermentum IFO 3956]
gi|227515493|ref|ZP_03945542.1| ribosomal protein S3 [Lactobacillus fermentum ATCC 14931]
gi|260662758|ref|ZP_05863652.1| 30S ribosomal protein S3 [Lactobacillus fermentum 28-3-CHN]
gi|183227329|dbj|BAG27845.1| 30S ribosomal protein S3 [Lactobacillus fermentum IFO 3956]
gi|227086106|gb|EEI21418.1| ribosomal protein S3 [Lactobacillus fermentum ATCC 14931]
gi|260552839|gb|EEX25838.1| 30S ribosomal protein S3 [Lactobacillus fermentum 28-3-CHN]
Length = 219
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 26/193 (13%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD + A LNE L + LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYADKNYAAYLNEDLRIRKYIEKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL ++ KR N VE+ L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNNLTNKRVHI--NVVEIKKPD-----LDAHLVGESVAEQLENRIAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHV 175
G ++ M +GAKG ++ V+G+L A ++ + DG + P++ ID +
Sbjct: 134 RGAMQRTMRAGAKGIKIQVAGRLNGADMSRIESYSDGTV-----PLHTLRADIDYSWDEA 188
Query: 176 LLRQGVLGIKVKI 188
GVLGIK I
Sbjct: 189 HTTYGVLGIKTWI 201
>gi|254455646|ref|ZP_05069075.1| ribosomal protein S3 [Candidatus Pelagibacter sp. HTCC7211]
gi|207082648|gb|EDZ60074.1| ribosomal protein S3 [Candidatus Pelagibacter sp. HTCC7211]
Length = 226
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 6 SKKRKFVADGVFFAE---LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+KK+ F G + E + E + + + G S V + T + + I +R V+G+K
Sbjct: 24 AKKKDF---GNYLIEDFKIREYIKKNVINSGVSKVMIERTSNKCYVTIYTSRPGFVIGKK 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G I ++ + + K F N V L ++V A AE++ +L+ ++ RRA
Sbjct: 81 GSDIDKIKNNLSK---FTTNEVALNIKEVKKPETNAYLVAENIAQQLVKRISYRRAMKRA 137
Query: 123 LRFIMESGAKGCEVIVSGKLRAQR-AKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
++ + GA+G +V VSG+L A++ +DG + S + ID A L G+
Sbjct: 138 MQSCIRLGARGIKVSVSGRLGGNEIARTEWLRDGSIPS--HTLRADIDYAEAEALTTYGI 195
Query: 182 LGIKVKI 188
+GIKV I
Sbjct: 196 IGIKVWI 202
>gi|227501140|ref|ZP_03931189.1| ribosomal protein S3 [Anaerococcus tetradius ATCC 35098]
gi|227216725|gb|EEI82126.1| ribosomal protein S3 [Anaerococcus tetradius ATCC 35098]
Length = 239
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 10 KFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
K+ AD F+EL +++ +E+ + G + +E+ +I I A + V+G+
Sbjct: 21 KWFADKKDFSELLVEDYNIRKIVKKEVYDAGIADIEIERAVNNLKITIFAAKPGMVIGKG 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G + EL ++K P + + E++ + L A AES+ +L +A RRA
Sbjct: 81 GAGVEELKKKLEK--AAPSKRIIINVEEIKYQDLAAQLVAESIASQLENRVAFRRAMKQS 138
Query: 123 LRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
++ M +GAKG + +VSG+L A A+S + +G + Q + ID G
Sbjct: 139 IQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEGTI--PLQTLRANIDYGFAEADTEYGK 196
Query: 182 LGIKVKI 188
+G KV I
Sbjct: 197 IGCKVWI 203
>gi|46199624|ref|YP_005291.1| 30S ribosomal protein S3 [Thermus thermophilus HB27]
gi|55981655|ref|YP_144952.1| 30S ribosomal protein S3 [Thermus thermophilus HB8]
gi|381191145|ref|ZP_09898656.1| 30S ribosomal protein S3 [Thermus sp. RL]
gi|384431866|ref|YP_005641226.1| 30S ribosomal protein S3 [Thermus thermophilus SG0.5JP17-16]
gi|386359809|ref|YP_006058054.1| 30S ribosomal protein S3 [Thermus thermophilus JL-18]
gi|24212666|sp|P80372.3|RS3_THET8 RecName: Full=30S ribosomal protein S3
gi|50401227|sp|P62663.2|RS3_THET2 RecName: Full=30S ribosomal protein S3
gi|10835587|pdb|1FJG|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotics Streptomycin,
Spectinomycin, And Paromomycin
gi|13096396|pdb|1HR0|C Chain C, Crystal Structure Of Initiation Factor If1 Bound To The
30s Ribosomal Subunit
gi|13399794|pdb|1HNW|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Tetracycline
gi|13399816|pdb|1HNX|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Pactamycin
gi|13399838|pdb|1HNZ|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Hygromycin B
gi|14278012|pdb|1GIX|F Chain F, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1gix, Contains The 30s Ribosome Subunit,
Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is
In The File 1giy
gi|14278058|pdb|1IBK|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotic Paromomycin
gi|14278079|pdb|1IBL|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site And With The Antibiotic Paromomycin
gi|14278103|pdb|1IBM|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site
gi|15826122|pdb|1JGO|F Chain F, The Path Of Messenger Rna Through The Ribosome. This File,
1jgo, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|15826147|pdb|1JGP|F Chain F, The Path Of Messenger Rna Through The Ribosome. This File,
1jgp, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|15826172|pdb|1JGQ|F Chain F, The Path Of Messenger Rna Through The Ribosome. This File,
1jgq, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|20663888|pdb|1J5E|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit
gi|27065878|pdb|1N32|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The First Codon
Position At The A Site With Paromomycin
gi|27065905|pdb|1N33|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The Second Codon
Position At The A Site With Paromomycin
gi|27065932|pdb|1N34|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Codon And
Crystallographically Disordered Near-Cognate Transfer
Rna Anticodon Stem-Loop Mismatched At The First Codon
Position
gi|27065958|pdb|1N36|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Crystallographically
Disordered Codon And Near-cognate Transfer Rna Anticodon
Stem-loop Mismatched At The Second Codon Position
gi|28373701|pdb|1ML5|F Chain F, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
gi|58177402|pdb|1XMO|C Chain C, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed
With Aag-Mrna In The Decoding Center
gi|58177425|pdb|1XMQ|C Chain C, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The
Decoding Center
gi|58177466|pdb|1XNQ|C Chain C, Structure Of An Inosine-Adenine Wobble Base Pair Complex
In The Context Of The Decoding Center
gi|58177489|pdb|1XNR|C Chain C, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair
In The Context Of The Decoding Center
gi|66361056|pdb|1YL4|F Chain F, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. 30s Subunit. The Coordinates For The 50s Subunit
Are In The Pdb Entry 1yl3
gi|88192238|pdb|2B64|C Chain C, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1
From A Crystal Structure Of The Whole Ribosomal Complex.
This File Contains The 30s Subunit, Trnas, Mrna And
Release Factor Rf1 From A Crystal Structure Of The Whole
Ribosomal Complex". The Entire Crystal Structure
Contains One 70s Ribosome, Trnas, Mrna And Release
Factor Rf1 And Is Described In Remark 400.
gi|88192301|pdb|2B9M|C Chain C, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2
From A Crystal Structure Of The Whole Ribosomal Complex.
This File Contains The 30s Ribosomal Subunit, Trnas,
Mrna And Release Factor Rf2 From A Crystal Structure Of
The Whole Ribosomal Complex". The Entire Crystal
Structure Contains One 70s Ribosome, Trnas, Mrna And
Release Factor Rf2 And Is Described In Remark 400.
gi|88192357|pdb|2B9O|C Chain C, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal
Structure Of The Whole Ribosomal Complex With A Stop
Codon In The A-Site. This File Contains The 30s Subunit,
Trnas And Mrna From A Crystal Structure Of The Whole
Ribosomal Complex With A Stop Codon In The A-Site And Is
Described In Remark 400.
gi|110591325|pdb|2F4V|C Chain C, 30s Ribosome + Designer Antibiotic
gi|116667656|pdb|2HHH|C Chain C, Crystal Structure Of Kasugamycin Bound To The 30s
Ribosomal Subunit
gi|116668199|pdb|2J00|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4).
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule I.
gi|116668260|pdb|2J02|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4)
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule Ii.
gi|119389714|pdb|2HGI|F Chain F, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgj.
gi|119389771|pdb|2HGP|F Chain F, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
With Translocated And Rotated Shine-Dalgarno Duplex.
This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgq.
gi|119389827|pdb|2HGR|F Chain F, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s
Ribosomal Subunit. The 50s Ribosomal Subunit Can Be
Found In Pdb Entry 2hgu.
gi|149242710|pdb|2OW8|DD Chain d, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
Functional Interactions And Rearrangements. This File,
2ow8, Contains The 30s Ribosome Subunit, Two Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File
1vsa.
gi|149243620|pdb|2UU9|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-asl With Cmo5u In
Position 34 Bound To An Mrna With A Gug-codon In The
A-site And Paromomycin.
gi|149243647|pdb|2UUA|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guc-Codon In The
A-Site And Paromomycin.
gi|149243674|pdb|2UUB|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guu-Codon In The
A-Site And Paromomycin.
gi|149243701|pdb|2UUC|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-asl With Cmo5u In
Position 34 Bound To An Mrna With A Gua-codon In The
A-site And Paromomycin.
gi|149243840|pdb|2UXC|C Chain C, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Ucgu In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|157836410|pdb|2UXB|C Chain C, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Gggu In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|157836487|pdb|2V46|C Chain C, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 1 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 1.
gi|157836543|pdb|2V48|C Chain C, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 3 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 2.
gi|158430902|pdb|2UXD|C Chain C, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Cggg In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|160285941|pdb|2QNH|DD Chain d, Interactions And Dynamics Of The Shine-Dalgarno Helix In
The 70s Ribosome. This File, 2qnh, Contains The 30s
Ribosome Subunit, Two Trna, And Mrna Molecules. 50s
Ribosome Subunit Is In The File 1vsp.
gi|186972851|pdb|2VQE|C Chain C, Modified Uridines With C5-methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-g
Wobble Pairing During Decoding
gi|186972874|pdb|2VQF|C Chain C, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|209156498|pdb|3D5A|C Chain C, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes As Described In Remark 400.
gi|209156554|pdb|3D5C|C Chain C, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|218766775|pdb|3F1E|C Chain C, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
70s Ribosome. The Entire Crystal Structure Contains Two
70s Ribosomes As Described In Remark 400.
gi|218766831|pdb|3F1G|C Chain C, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|226887376|pdb|2WDG|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule I.
gi|226887401|pdb|2WDH|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule Ii.
gi|226887490|pdb|2WDK|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule I.
gi|226887547|pdb|2WDM|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule Ii.
gi|237823531|pdb|2WH1|C Chain C, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome
gi|237823590|pdb|2WH3|C Chain C, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome). This File Contains The
30s Subunit.
gi|260099988|pdb|3HUW|C Chain C, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
Molecule I.
gi|260100044|pdb|3HUY|C Chain C, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
Molecule Ii.
gi|261824486|pdb|2WRI|C Chain C, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 1 Of 4).
gi|261824548|pdb|2WRK|C Chain C, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 3 Of 4).
gi|261824610|pdb|2WRN|C Chain C, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 1 Of 4).
gi|261824669|pdb|2WRQ|C Chain C, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 3 Of 4).
gi|281307169|pdb|3KIQ|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 1 Of 4)
gi|281307227|pdb|3KIS|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 3 Of 4)
gi|281307285|pdb|3KIU|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 1 Of 4)
gi|281307343|pdb|3KIX|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 3 Of 4)
gi|288965606|pdb|3KNH|C Chain C, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 30s Subunit For Molecule I
gi|289526684|pdb|3KNJ|C Chain C, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 30s Subunit For Molecule Ii'
gi|289526709|pdb|3KNL|C Chain C, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule I
gi|289526734|pdb|3KNN|C Chain C, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule Ii
gi|294979506|pdb|3I8G|F Chain F, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s
Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In
The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
(50s).
gi|294979531|pdb|3I8H|F Chain F, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s
Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In
The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
(30s).
gi|294979590|pdb|3I9B|F Chain F, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B.
The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule
A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
And 3i9e (50s)
gi|294979644|pdb|3I9D|F Chain F, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A.
The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule
B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
And 3i9c (50s)
gi|295982077|pdb|2X9R|C Chain C, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|295982136|pdb|2X9T|C Chain C, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|307567964|pdb|2XFZ|C Chain C, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 1 Of 4)
gi|307568022|pdb|2XG1|C Chain C, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 3 Of 4)
gi|307776614|pdb|3OTO|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga
Mutant Of Thermus Thermophilus (Hb8)
gi|309320237|pdb|3OGE|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320258|pdb|3OGY|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320339|pdb|3OHC|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320360|pdb|3OHD|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320441|pdb|3OHY|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320492|pdb|3OI0|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320543|pdb|3OI2|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320594|pdb|3OI4|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|312207675|pdb|2XQD|C Chain C, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
Ribosome With A Gtp Analog
gi|313754001|pdb|2XSY|C Chain C, Trna Tranlocation On The 70s Ribosome: The Pre-
Translocational Translocation Intermediate Ti(Pre)
gi|313754116|pdb|2XUY|C Chain C, Trna Translocation On The 70s Ribosome: The Post-
Translocational Translocation Intermediate Ti(Post)
gi|325533404|pdb|2Y0U|C Chain C, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533463|pdb|2Y0W|C Chain C, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533522|pdb|2Y0Y|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533581|pdb|2Y10|C Chain C, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|325533640|pdb|2Y12|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533699|pdb|2Y14|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533758|pdb|2Y16|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533817|pdb|2Y18|C Chain C, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|347948797|pdb|3ZVO|C Chain C, Crystal Structure Of The Hybrid State Of Ribosome In
Complex With The Guanosine Triphosphatase Release Factor
3
gi|374074265|pdb|3T1H|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Human Anti-Codon Stem Loop
(Hasl) Of Transfer Rna Lysine 3 (Trnalys3) Bound To An
Mrna With An Aaa-Codon In The A-Site And Paromomycin
gi|374074290|pdb|3T1Y|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Human Anti-Codon Stem Loop
(Hasl) Of Transfer Rna Lysine 3 (Trnalys3) Bound To An
Mrna With An Aag-Codon In The A-Site And Paromomycin
gi|374074507|pdb|3UXS|C Chain C, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|374074528|pdb|3UXT|C Chain C, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.'
gi|380764244|pdb|3TVF|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
gi|380764269|pdb|3TVG|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
gi|380764346|pdb|3UYD|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
gi|380764402|pdb|3UYF|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
gi|380764522|pdb|3UZ3|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin.
gi|380764547|pdb|3UZ4|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin.
gi|380764573|pdb|3UZ6|F Chain F, Structure Analysis Of Ribosomal Decoding. This Entry
Contains The 30s Ribosomal Subunit Of The First 70s
Molecule In The Asymmetric Unit For The Cognate Trna-Tyr
Complex
gi|380764599|pdb|3UZ7|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Tyr Complex.
gi|380764719|pdb|3UZG|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex
gi|380764775|pdb|3UZI|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex
gi|380764830|pdb|3UZL|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex With Paromomycin
gi|380764856|pdb|3UZM|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-cognate
Trna-tyr Complex With Paromomycin
gi|381353090|pdb|4ABR|C Chain C, Complex Of Smpb, A Tmrna Fragment And Ef-Tu-Gdp-Kirromycin
With The 70s Ribosome
gi|381353194|pdb|4DH9|C Chain C, Crystal Structure Of Yaej Bound To The 70s Ribosome
gi|381353249|pdb|4DHB|C Chain C, Crystal Structure Of Yaej Bound To The 70s Ribosome
gi|388325945|pdb|3V22|C Chain C, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Rmf Of The 1st Ribosome In The Asu
gi|388325998|pdb|3V24|C Chain C, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Rmf Of The 2nd Ribosome In The Asu
gi|388326051|pdb|3V26|C Chain C, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Hpf Of The 1st Ribosome In The Asu
gi|388326104|pdb|3V28|C Chain C, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Hpf Of The 2nd Ribosome In The Asu
gi|388326227|pdb|3V2C|C Chain C, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Yfia Of The 1st Ribosome In The Asu
gi|388326280|pdb|3V2E|C Chain C, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Yfia Of The 2nd Ribosome In The Asu
gi|395759336|pdb|4AQY|C Chain C, Structure Of Ribosome-Apramycin Complexes
gi|414145509|pdb|4DR1|C Chain C, Crystal Structure Of The Apo 30s Ribosomal Subunit From
Thermus Thermophilus (hb8)
gi|414145530|pdb|4DR2|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Multiple Copies Of Paromomycin
Molecules Bound
gi|414145551|pdb|4DR3|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Streptomycin Bound
gi|414145572|pdb|4DR4|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Cognate Transfer Rna
Anticodon Stem-loop And Multiple Copies Of Paromomycin
Molecules Bound
gi|414145595|pdb|4DR5|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Crystallographically
Disordered Cognate Transfer Rna Anticodon Stem-loop And
Streptomycin Bound
gi|414145618|pdb|4DR6|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Near-cognate Transfer Rna
Anticodon Stem-loop Mismatched At The First Codon
Position And Streptomycin Bound
gi|414145643|pdb|4DR7|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Crystallographically
Disordered Near-cognate Transfer Rna Anticodon Stem-loop
Mismatched At The Second Codon Position, And
Streptomycin Bound
gi|451928691|pdb|4G5K|F Chain F, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 30s Subunit Of Molecule A.
gi|451928744|pdb|4G5M|F Chain F, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 30s Subunit Of Molecule B.
gi|451928797|pdb|4G5T|F Chain F, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 30s Subunit Of Molecule A.
gi|451928851|pdb|4G5V|F Chain F, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 30s Subunit Of Molecule B.
gi|453055751|pdb|4DUY|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U13c
gi|453055772|pdb|4DUZ|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U13c, Bound
With Streptomycin
gi|453055793|pdb|4DV0|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U20g
gi|453055814|pdb|4DV1|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U20g, Bound
With Streptomycin
gi|453055835|pdb|4DV2|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, C912a
gi|453055856|pdb|4DV3|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, C912a, Bound
With Streptomycin
gi|453055877|pdb|4DV4|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A914g
gi|453055898|pdb|4DV5|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A914g, Bound
With Streptomycin
gi|453055919|pdb|4DV6|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A915g
gi|453055940|pdb|4DV7|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A915g, Bound
With Streptomycin
gi|13446666|emb|CAC35062.1| ribosomal protein S3 [Thermus thermophilus HB27]
gi|46197250|gb|AAS81664.1| SSU ribosomal protein S3P [Thermus thermophilus HB27]
gi|55773068|dbj|BAD71509.1| 30S ribosomal protein S3 [Thermus thermophilus HB8]
gi|333967334|gb|AEG34099.1| ribosomal protein S3 [Thermus thermophilus SG0.5JP17-16]
gi|380450934|gb|EIA38547.1| 30S ribosomal protein S3 [Thermus sp. RL]
gi|383508836|gb|AFH38268.1| ribosomal protein S3, bacterial type [Thermus thermophilus JL-18]
Length = 239
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 24 VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+L +EL G + V++ + + + V+G G RIR L ++ K +
Sbjct: 42 LLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLR---EELAKLTGKN 98
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL- 142
V L ++V N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG++
Sbjct: 99 VALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIG 158
Query: 143 RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLE---WDQKGKQG 199
A++A++ G + N ID GVLG+K I L QK K
Sbjct: 159 GAEQARTEWAAQGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYIFLGEVIGGQKPKAR 216
Query: 200 PTTP 203
P P
Sbjct: 217 PELP 220
>gi|14278532|pdb|1I94|C Chain C, Crystal Structures Of The Small Ribosomal Subunit With
Tetracycline, Edeine And If3
gi|14278553|pdb|1I95|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Edeine
gi|14278574|pdb|1I96|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With The Translation
Initiation Factor If3 (C-Terminal Domain)
gi|14278596|pdb|1I97|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Tetracycline
gi|149241277|pdb|2E5L|C Chain C, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via
The Shine- Dalgarno Interaction
gi|226887631|pdb|2ZM6|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit
Length = 238
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 9/184 (4%)
Query: 24 VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+L +EL G + V++ + + + V+G G RIR L ++ K +
Sbjct: 41 LLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLR---EELAKLTGKN 97
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL- 142
V L ++V N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG++
Sbjct: 98 VALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIG 157
Query: 143 RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLE---WDQKGKQG 199
A++A++ G + N ID GVLG+K I L QK K
Sbjct: 158 GAEQARTEWAAQGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYIFLGEVIGGQKPKAR 215
Query: 200 PTTP 203
P P
Sbjct: 216 PELP 219
>gi|47459076|ref|YP_015938.1| 30S ribosomal protein S3 [Mycoplasma mobile 163K]
gi|61215555|sp|Q6KI49.1|RS3_MYCMO RecName: Full=30S ribosomal protein S3
gi|47458405|gb|AAT27727.1| 30S ribosomal protein s3 [Mycoplasma mobile 163K]
Length = 225
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 8/151 (5%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
+++ + + +LG+ G I +LT +QK + E + + + N L AI AE +
Sbjct: 67 VLVHSAKPGAILGQNGENINKLTQDIQKLLRNKELKLNIEVVNIKNPDLNAIILAEQIAI 126
Query: 108 KLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYMISSGQPVNE 166
KL R A +R M+SGAKG + VSG+L A+S + +G M + +
Sbjct: 127 KLENRAPFRVAQKFAIRNAMKSGAKGIKTQVSGRLNGVDMARSEGYSEGEM--KLHTLRQ 184
Query: 167 YIDSAVRHVLLRQGVLGIKVKIMLEWDQKGK 197
+D A+ G +G+KV W KG+
Sbjct: 185 DVDFAMATARTTYGAIGVKV-----WVSKGE 210
>gi|225948|prf||1404256A ribosomal protein HS4
Length = 83
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 52/82 (63%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ G+ ++++E ELA GY +E+ TP+ +I+++A + V+G+ G+
Sbjct: 1 MADELEFIEQGLQRSQIDEFFAEELARAGYGSMELAPTPMGMQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ +++RF + +++
Sbjct: 61 NIRKITTQLEERFDLEDPQIDV 82
>gi|308233858|ref|ZP_07664595.1| ribosomal protein S3 [Atopobium vaginae DSM 15829]
gi|328943566|ref|ZP_08241031.1| 30S ribosomal protein S3 [Atopobium vaginae DSM 15829]
gi|327491535|gb|EGF23309.1| 30S ribosomal protein S3 [Atopobium vaginae DSM 15829]
Length = 236
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 9/189 (4%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + L + LA S VE+ + +++I +R V+G+KG I +L VQK K
Sbjct: 38 EIRKYLKKRLASAALSRVEIERAGDKVKVVILTSRPGIVIGKKGTEIDDLRKDVQKIAKV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ V + ++ L A A+ + +L G +A RRA ++ ++GAKG + S
Sbjct: 98 GKGDVNVEVVEIKQPDLDAQLTADRIAEQLEGRVAFRRAVRKAVQGATKAGAKGIRIQCS 157
Query: 140 GKLRAQRAKSMKF-KDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIMLEWDQK 195
G+L +++ ++G + P++ ID A G +GIKV I L
Sbjct: 158 GRLNGAEMGRVEWSREGRV-----PLHTLRAKIDYAQATASTTMGAVGIKVWIYLGEKLP 212
Query: 196 GKQGPTTPL 204
G+ P L
Sbjct: 213 GQSAPNPAL 221
>gi|224510697|pdb|3FIC|C Chain C, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
And Ef- Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
6.4 A Cryo-Em Map. This File Contains The 30s Subunit
And The Ligands
Length = 207
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 24 VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+L +EL G + V++ + + + V+G G RIR L ++ K +
Sbjct: 41 LLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLR---EELAKLTGKN 97
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL- 142
V L ++V N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG++
Sbjct: 98 VALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIG 157
Query: 143 RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
A++A++ G + N ID GVLG+K I L
Sbjct: 158 GAEQARTEWAAQGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYIFL 203
>gi|34811531|pdb|1PNS|C Chain C, Crystal Structure Of A Streptomycin Dependent Ribosome
From E. Coli, 30s Subunit Of 70s Ribosome. This File,
1pns, Contains The 30s Subunit, Two Trnas, And One Mrna
Molecule. The 50s Ribosomal Subunit Is In File 1pnu.
gi|34811587|pdb|1PNX|C Chain C, Crystal Structure Of The Wild Type Ribosome From E. Coli,
30s Subunit Of 70s Ribosome. This File, 1pnx, Contains
Only Molecules Of The 30s Ribosomal Subunit. The 50s
Subunit Is In The Pdb File 1pny.
gi|56966325|pdb|1VOQ|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966378|pdb|1VOS|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966431|pdb|1VOV|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966484|pdb|1VOX|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966537|pdb|1VOZ|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|300508607|pdb|3MR8|C Chain C, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 3ms1.
Molecule B In The Same Asymmetric Unit Is Deposited As
3mrz (50s) And 3ms0 (30s).
gi|300508662|pdb|3MS0|C Chain C, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 3mrz.
Molecule A In The Same Asymmetric Unit Is Deposited As
3mr8 (30s) And 3ms1 (50s).
gi|322812552|pdb|3PYN|C Chain C, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812605|pdb|3PYQ|C Chain C, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The Second 70s
Ribosome.
gi|322812658|pdb|3PYS|C Chain C, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812711|pdb|3PYU|C Chain C, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The Second 70s Ribosome
Length = 206
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 24 VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+L +EL G + V++ + + + V+G G RIR L ++ K +
Sbjct: 41 LLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLR---EELAKLTGKN 97
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL- 142
V L ++V N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG++
Sbjct: 98 VALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIG 157
Query: 143 RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
A++A++ G + N ID GVLG+K I L
Sbjct: 158 GAEQARTEWAAQGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYIFL 203
>gi|238018629|ref|ZP_04599055.1| hypothetical protein VEIDISOL_00464 [Veillonella dispar ATCC 17748]
gi|237865100|gb|EEP66390.1| hypothetical protein VEIDISOL_00464 [Veillonella dispar ATCC 17748]
Length = 221
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 23/206 (11%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD F A L+E L L G S +E+ T R ++ I + V+G G
Sbjct: 21 KWYADKDFAANLHEDVKIRNFLKETLFIAGISRIEIERTNKRIKLTIHTAKPGMVIGRGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ + + F + V++ ++ + AI AE++ +L + RRA +
Sbjct: 81 AGIEDIKKAMTR---FTDKQVDVNIAEIKQADMDAILVAENIAGQLERRIGFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQ 179
M GAKG +++VSG+L A+ A+S +++G + P++ ID
Sbjct: 138 GRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSI-----PLHTLRADIDYGTAEAHTTY 192
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLP 205
G +GIKV W KG+ P P
Sbjct: 193 GCIGIKV-----WIYKGEVLPEAKQP 213
>gi|342210663|ref|ZP_08703419.1| 30S ribosomal protein S3 [Mycoplasma anatis 1340]
gi|341579159|gb|EGS29300.1| 30S ribosomal protein S3 [Mycoplasma anatis 1340]
Length = 217
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 37 VEVRVT-PVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRG 95
VEVR T + +I+ + +LG++G+ I ELT + K K +V + ++
Sbjct: 55 VEVRRTQDNKVTVIVHTAKPAAMLGQEGKNIAELTVKLTKSIKNKNLNVNIQVVELKKPD 114
Query: 96 LCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKD 154
L A AES+ KL + R A +R M SGAKG + VSG+L A++ + +
Sbjct: 115 LNARLLAESIAIKLENRESFRTAQKMAIRNAMRSGAKGIKTAVSGRLNGVDMARTEGYSE 174
Query: 155 GYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI----MLEWDQK 195
G M + + +D A G +G+KV + +LE D K
Sbjct: 175 GEM--KLHTLRQNVDYATATARTTYGAIGVKVWVSLGEILEGDNK 217
>gi|433624386|ref|YP_007258016.1| 30S ribosomal protein S3 [Mycoplasma cynos C142]
gi|429534412|emb|CCP23914.1| 30S ribosomal protein S3 [Mycoplasma cynos C142]
Length = 216
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 45 RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAES 104
+ ++I R +LG++G+ I+ELT +QK K + ++ L ++ L A AE
Sbjct: 64 KVTVLIHTVRPAAILGQEGKNIQELTVKIQKYVKNRKLNLNLQVLELKKPDLNAKLLAEM 123
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYM-ISSGQ 162
+ KL + R A +R M++GAKG + +VSG+L A+S + +G M + + +
Sbjct: 124 IATKLENRESFRSAQKIAIRLAMKAGAKGIKTMVSGRLNGVDMARSEGYSEGEMKLHTLR 183
Query: 163 PVNEYIDSAVRHVLLRQGVLGIKVKIML 190
EY + R G +G+KV I L
Sbjct: 184 QDVEYATATARTTY---GAIGVKVWISL 208
>gi|359417826|ref|ZP_09209890.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
gi|358031816|gb|EHK00656.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
Length = 73
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSG-VEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
++++F+ G +LNE L EL GYSG +++ TP T+I++ A R V+G G R
Sbjct: 2 QEKQFIEKGAQKVKLNEFLQDELEGAGYSGNFDLQRTPTSTKIVVEAQRPGLVIGRGGSR 61
Query: 66 IRELTSVVQKR 76
IRELTS +R
Sbjct: 62 IRELTSAPGRR 72
>gi|406942220|gb|EKD74509.1| hypothetical protein ACD_44C00423G0009 [uncultured bacterium]
Length = 223
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 25 LTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSV 84
+ +E A G S V ++ +II+ A R ++G+KG + + + V K P V
Sbjct: 42 IQKEWASAGISRVYIKRPAKNAQIIVYAARPGIIIGKKGEEVERVRAHVSKLMGIP---V 98
Query: 85 ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL-R 143
L E+V L A AE++ +L + RRA + M SGAKG ++ VSG+L
Sbjct: 99 HLAIEEVRKPELDAKLVAETVAQQLEKRIMFRRAMKRAVTSAMRSGAKGIKINVSGRLGG 158
Query: 144 AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
A+ A++ +++G + + +D + GV+G+KV I
Sbjct: 159 AEIARNEWYREGRV--PLHTLRAEVDYGTAEAMTTYGVIGVKVWIF 202
>gi|291613242|ref|YP_003523399.1| 30S ribosomal protein S3 [Sideroxydans lithotrophicus ES-1]
gi|291583354|gb|ADE11012.1| ribosomal protein S3 [Sideroxydans lithotrophicus ES-1]
Length = 238
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 1 MATQISKKRKFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPVRTEIIIRAT 53
++ Q + K+ ++ F+EL + L ++LA G S + + +I I
Sbjct: 12 LSVQKNWTSKWYSNSKHFSELLLKDIEVRDYLKKKLAGAGVSKIVIERPAKNAKITIYTA 71
Query: 54 RTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL 113
R V+G+KG I L + ++KR P+ V L E+V + A A+S+ +L +
Sbjct: 72 RPGVVIGKKGEDIESLRNELKKRMGLPD--VGLNIEEVRKPEVDAQLIADSITQQLEKRI 129
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYMISSGQPVNEY---ID 169
RRA ++ M GA+G +++ SG+L + A++ +++G + P++ ID
Sbjct: 130 MFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRV-----PLHTLRADID 184
Query: 170 SAVRHVLLRQGVLGIKVKIMLEWDQKGKQGPTTPL 204
L G++G+KV + G+Q P+
Sbjct: 185 YGTSEALTTYGLIGVKVWVYKGDHVAGQQEAAAPV 219
>gi|377556480|ref|ZP_09786185.1| 30S ribosomal protein S3 [Lactobacillus gastricus PS3]
gi|376168408|gb|EHS87182.1| 30S ribosomal protein S3 [Lactobacillus gastricus PS3]
Length = 214
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 26/193 (13%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD + A LNE L + LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYADKDYAAYLNEDLRIREYIEKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL ++ KR N VE + L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNALTGKRVHI--NVVE-----IKKPDLEAHLVGESVAQQLENRVAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHV 175
G ++ M +GAKG ++ V+G+L A ++ + DG + P++ ID +
Sbjct: 134 RGAMQRAMRAGAKGIKIQVAGRLNGADMSRVESYSDGTV-----PLHTLRADIDYSWDEA 188
Query: 176 LLRQGVLGIKVKI 188
GVLGIK I
Sbjct: 189 HTTYGVLGIKTWI 201
>gi|356960596|ref|ZP_09063578.1| SSU ribosomal protein S3P [gamma proteobacterium SCGC AAA001-B15]
Length = 230
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + L +EL S + + +III R V+G+KG I L +V +
Sbjct: 38 EVRDYLFKELTSASVSRISIERLSNTAKIIIHTARPGIVIGKKGADIERLKKIVSAKMGV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V + E+V L A AE++ +L + RRA VL GA G +++VS
Sbjct: 98 P---VHISIEEVKQPELDARLVAENIAQQLEKRVMYRRAVKRVLGNATRLGALGIKIMVS 154
Query: 140 GKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIM 189
G+L A+ A+S +++G + P++ + +D + + GV+GIKV I
Sbjct: 155 GRLNGAEIARSEWYREGRV-----PLHTFRADVDYSSFSANTQHGVIGIKVWIF 203
>gi|406706346|ref|YP_006756699.1| 30S ribosomal protein S3 [alpha proteobacterium HIMB5]
gi|406652122|gb|AFS47522.1| SSU ribosomal protein S3P [alpha proteobacterium HIMB5]
Length = 226
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 6 SKKRKFVADGVFFAE---LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+KK+ F G + E + E + + + G S V + T + + I +R V+G+K
Sbjct: 24 AKKKDF---GNYLIEDFKIREYIKKNVINSGVSKVMIERTSNKCYVTIYTSRPGFVIGKK 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G I ++ + + K N V L ++V A AE++ +L+ ++ RRA
Sbjct: 81 GSDIDKIKNNLAK---ITSNEVALNIKEVKKPETNAYLVAENIAQQLVKRISYRRAMKRA 137
Query: 123 LRFIMESGAKGCEVIVSGKLRAQR-AKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
++ + GAKG +V +SG+L A++ +DG + S + ID A L G+
Sbjct: 138 MQSCLRLGAKGIKVSISGRLGGNEIARTEWLRDGSIPS--HTLRADIDYAEAEALTTYGI 195
Query: 182 LGIKVKI 188
+GIKV I
Sbjct: 196 IGIKVWI 202
>gi|386817422|ref|ZP_10104640.1| SSU ribosomal protein S3P [Thiothrix nivea DSM 5205]
gi|386421998|gb|EIJ35833.1| SSU ribosomal protein S3P [Thiothrix nivea DSM 5205]
Length = 230
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 10/189 (5%)
Query: 8 KRKFVADGVFFA-------ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ K+ A+G +A E+ L ++L E S +++ I I R V+G
Sbjct: 19 RSKWYAEGKDYADFLHKDLEVRSFLKKKLKEASVSRIQIERPAKSAFITIHTARPGVVIG 78
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KG I +L + + N+V+L E++ L A AES+ +L + RRA
Sbjct: 79 KKGEDIEKLRAETASKLGLHVNNVKLNIEEIRKPELDAQLVAESIASQLECRIMFRRAMK 138
Query: 121 GVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
+ M GA G +V V+G+L A+ A++ +++G + + ID A L
Sbjct: 139 RAVSNAMRLGALGVKVSVAGRLNGAEIARTEWYREGRV--PLHTLRADIDYATAEALTTY 196
Query: 180 GVLGIKVKI 188
G++G+KV I
Sbjct: 197 GIIGVKVWI 205
>gi|406983727|gb|EKE04887.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 217
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 25 LTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVV-----QKRFKF 79
L ++L+ G VE+ P II+ +R V+G G I EL V + +
Sbjct: 43 LMKKLSVAGIVSVEIERQPKSIVIIVTVSRPGVVIGRGGSGIEELKKFVVLLLNKGKVTK 102
Query: 80 PEN-SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
EN ++L ++ N L A AE + L + RR+ + +M + A G ++++
Sbjct: 103 TENIKIDLKVNEIKNYDLSAYLVAERIAQDLEKRIPHRRSVTKAMERVMMARAGGIKIVL 162
Query: 139 SGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+G++ A+ A+ KF G + + Q + E ID A R L ++G +G+KV I
Sbjct: 163 AGRINGAEIARIEKFHQGSVPT--QTLREDIDYAERPALTKRGYVGVKVWI 211
>gi|406944039|gb|EKD75900.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 250
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 28 ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN-SVEL 86
+L + G S VE+R + I IR + ++G G + EL +++RF E + L
Sbjct: 46 KLRDGGVSRVEIRRANDQMTIHIRTAKPGVIIGRSGSGVEELKRQIKRRFFGSEKMHIHL 105
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
E+V N + A + + ++L + RRA + +M+ GAKG ++IVSG+L
Sbjct: 106 EIEEVRNPDVDAELIMQGIVFQLEKRIPFRRAMKRSIEQVMQGGAKGVKIIVSGRL 161
>gi|149192563|ref|ZP_01870730.1| 30S ribosomal protein S3 [Vibrio shilonii AK1]
gi|148833604|gb|EDL50674.1| 30S ribosomal protein S3 [Vibrio shilonii AK1]
Length = 232
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 20/196 (10%)
Query: 2 ATQISKKRKFVA--DGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
AT + ++F DG F ++ + LT+ELA+ S + + + I R V+
Sbjct: 20 ATWFANTKEFADNLDGDF--KVRQFLTKELAKASLSRIVIERPAKSIRVTIHTARPGVVI 77
Query: 60 GEKGRRIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+KG + +L + V K P N E+ +++ + L A + A L +++ A++R
Sbjct: 78 GKKGEDVEKLRTAVAKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKR 136
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVR 173
A +R GAKG +V VSG+L A+ A+S +++G + P++ ID A
Sbjct: 137 AVQNAMRL----GAKGIKVEVSGRLGGAEIARSEWYREGRV-----PLHTLRADIDYATS 187
Query: 174 HVLLRQGVLGIKVKIM 189
+ GV+GIKV I
Sbjct: 188 SAHTQYGVIGIKVWIF 203
>gi|229815769|ref|ZP_04446094.1| hypothetical protein COLINT_02818 [Collinsella intestinalis DSM
13280]
gi|229808685|gb|EEP44462.1| hypothetical protein COLINT_02818 [Collinsella intestinalis DSM
13280]
Length = 236
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ L + LA S VE+ + ++II R V+G+KG I L + ++K
Sbjct: 37 EIRRFLEKRLARAAVSRVEIERAGDKVKVIILTARPGVVIGKKGSEIDGLRTELEKVAGV 96
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ ++ + +V L A+ A+S+ +L G +A RRA ++ ++GAKG + S
Sbjct: 97 SKGNLSVDVIEVKRPELDAVLVAQSIAEQLEGRVAFRRAMRKAVQSARKAGAKGIRIQCS 156
Query: 140 GKL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQ 198
G+L A+ + +++G + + ID G G+KV W +G++
Sbjct: 157 GRLGGAEMGRREWYREGRVPL--HTLRAKIDYGTATARTTMGSCGVKV-----WIYQGEK 209
Query: 199 GPTTPLPDL 207
P P+P++
Sbjct: 210 LPGQPVPNM 218
>gi|429331932|ref|ZP_19212672.1| 30S ribosomal protein S3 [Pseudomonas putida CSV86]
gi|428763443|gb|EKX85618.1| 30S ribosomal protein S3 [Pseudomonas putida CSV86]
Length = 228
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 19/190 (10%)
Query: 11 FVADGVFFAE--LNEVLTRELAEDGYSGVEV-RVT---PVRT-EIIIRATRTQNVLGEKG 63
+ ADG +A+ L ++ TRE +D V R+ P +T I I R V+G+KG
Sbjct: 22 WYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L + A+S+ +L + RRA +
Sbjct: 82 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDGMLVAQSVAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQ 179
+ M GAKG ++ VSG+L A+ A++ +++G + P++ ID A
Sbjct: 139 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYATYEAHTTY 193
Query: 180 GVLGIKVKIM 189
GV+G+KV I
Sbjct: 194 GVIGVKVWIF 203
>gi|344941049|ref|ZP_08780337.1| ribosomal protein S3 [Methylobacter tundripaludum SV96]
gi|344262241|gb|EGW22512.1| ribosomal protein S3 [Methylobacter tundripaludum SV96]
Length = 223
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 23 EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
+ + ++LA S +++ P I I R V+G+KG I L V K P
Sbjct: 41 DYIKKKLAHASVSRIQINRPPNNAHITIHTARPGIVIGKKGEDIEALRQAVSKIMGIP-- 98
Query: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
V+L E++ L A AE + +L + RRA + M GA+G ++ V G+L
Sbjct: 99 -VQLNVEEIRKPELDAQLVAEGVAQQLEKRIMYRRAMKRAVTNTMRLGAEGIKINVGGRL 157
Query: 143 R-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIM 189
A+ A+S +++G + P++ ID A G++GIKV I
Sbjct: 158 NGAEIARSEWYREGRV-----PLHTLRADIDYATAEAHTTYGIIGIKVWIF 203
>gi|104779761|ref|YP_606259.1| 30S ribosomal protein S3 [Pseudomonas entomophila L48]
gi|123381068|sp|Q1IFW0.1|RS3_PSEE4 RecName: Full=30S ribosomal protein S3
gi|95108748|emb|CAK13442.1| 30S ribosomal subunit protein S3 [Pseudomonas entomophila L48]
Length = 228
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 19/190 (10%)
Query: 11 FVADGVFFAE--LNEVLTRELAEDGYSGVEV-RVT---PVRT-EIIIRATRTQNVLGEKG 63
+ ADG +A+ L ++ TRE +D V R+ P +T I I R V+G+KG
Sbjct: 22 WYADGATYADYLLKDLQTREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L A+ A+S+ +L + RRA +
Sbjct: 82 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQ 179
+ M GAKG ++ VSG+L A+ A++ +++G + P++ ID
Sbjct: 139 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYNTYEAHTTY 193
Query: 180 GVLGIKVKIM 189
GV+G+KV I
Sbjct: 194 GVIGVKVWIF 203
>gi|254556023|ref|YP_003062440.1| 30S ribosomal protein S3 [Lactobacillus plantarum JDM1]
gi|254044950|gb|ACT61743.1| 30S ribosomal protein S3 [Lactobacillus plantarum JDM1]
Length = 217
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ A+ F A LNE L + LA+ S VE+ R I I + V+G+ G
Sbjct: 21 KWYAEKDFAAYLNEDLRIRKYIEQRLADASVSTVEIERAANRVNISIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL ++ KR N +E + L A ES+ +L G +A RRA
Sbjct: 81 SEVEALRKELNNLTSKRVHI--NIIE-----IKKPDLDAKLVGESIARQLEGRVAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
G ++ M SGAKG + V+G+L A ++ + DG
Sbjct: 134 RGAMQRTMRSGAKGIKTQVAGRLNGADMSRVEAYSDG 170
>gi|24981839|gb|AAN66090.1|AE016238_8 ribosomal protein S3 [Pseudomonas putida KT2440]
Length = 237
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 19/190 (10%)
Query: 11 FVADGVFFAE--LNEVLTRELAEDGYSGVEV-RVT---PVRT-EIIIRATRTQNVLGEKG 63
+ ADG +A+ L ++ TRE +D V R+ P +T I I R V+G+KG
Sbjct: 31 WYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 90
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L A+ A+S+ +L + RRA +
Sbjct: 91 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAV 147
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQ 179
+ M GAKG ++ VSG+L A+ A++ +++G + P++ ID
Sbjct: 148 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYNTYEAHTTY 202
Query: 180 GVLGIKVKIM 189
GV+G+KV I
Sbjct: 203 GVIGVKVWIF 212
>gi|156743942|ref|YP_001434071.1| 30S ribosomal protein S3 [Roseiflexus castenholzii DSM 13941]
gi|156235270|gb|ABU60053.1| ribosomal protein S3 [Roseiflexus castenholzii DSM 13941]
Length = 260
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 96/191 (50%), Gaps = 15/191 (7%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
L +++ +EL G + +++ + + E+ + + V+G++G ++ EL + +R
Sbjct: 38 LRKIIAKELENAGVARIDIERSANKVEVTVHTAKPGIVIGKRGAKVDELREELARRTG-- 95
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
V+L ++++ L A AES+ ++ ++ +RA ++ M GA+G ++ SG
Sbjct: 96 -KKVKLNIQEIHQPELEAQLVAESIAEQINKRVSYKRAMKQAVQRAMRLGAQGVKIKCSG 154
Query: 141 KLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIM---LEWD 193
+L A+ A+ +DG + P++ ID A H G +G+KV I + D
Sbjct: 155 RLAGAEMARIAWERDGRV-----PLHTLRADIDYAQVHAHTTYGRIGVKVWIYKGDVFPD 209
Query: 194 QKGKQGPTTPL 204
QKG+ PT P+
Sbjct: 210 QKGQLQPTQPV 220
>gi|148545745|ref|YP_001265847.1| 30S ribosomal protein S3 [Pseudomonas putida F1]
gi|161378146|ref|NP_742626.2| 30S ribosomal protein S3 [Pseudomonas putida KT2440]
gi|167031506|ref|YP_001666737.1| 30S ribosomal protein S3 [Pseudomonas putida GB-1]
gi|170723900|ref|YP_001751588.1| 30S ribosomal protein S3 [Pseudomonas putida W619]
gi|325272013|ref|ZP_08138457.1| 30S ribosomal protein S3 [Pseudomonas sp. TJI-51]
gi|339485393|ref|YP_004699921.1| 30S ribosomal protein S3 [Pseudomonas putida S16]
gi|386010119|ref|YP_005928396.1| protein RpsC [Pseudomonas putida BIRD-1]
gi|395446843|ref|YP_006387096.1| ribosomal protein S3 [Pseudomonas putida ND6]
gi|397696205|ref|YP_006534088.1| 30S ribosomal protein S3 [Pseudomonas putida DOT-T1E]
gi|398843898|ref|ZP_10601015.1| ribosomal protein S3, bacterial type [Pseudomonas sp. GM84]
gi|421524888|ref|ZP_15971509.1| 30S ribosomal protein S3 [Pseudomonas putida LS46]
gi|421528304|ref|ZP_15974871.1| 30S ribosomal protein S3 [Pseudomonas putida S11]
gi|431800513|ref|YP_007227416.1| 30S ribosomal protein S3 [Pseudomonas putida HB3267]
gi|34098362|sp|Q88QM9.2|RS3_PSEPK RecName: Full=30S ribosomal protein S3
gi|172048429|sp|A5VXQ3.1|RS3_PSEP1 RecName: Full=30S ribosomal protein S3
gi|148509803|gb|ABQ76663.1| SSU ribosomal protein S3P [Pseudomonas putida F1]
gi|166857994|gb|ABY96401.1| ribosomal protein S3 [Pseudomonas putida GB-1]
gi|169761903|gb|ACA75219.1| ribosomal protein S3 [Pseudomonas putida W619]
gi|313496825|gb|ADR58191.1| RpsC [Pseudomonas putida BIRD-1]
gi|324102844|gb|EGC00247.1| 30S ribosomal protein S3 [Pseudomonas sp. TJI-51]
gi|338836236|gb|AEJ11041.1| ribosomal protein S3 [Pseudomonas putida S16]
gi|388560840|gb|AFK69981.1| ribosomal protein S3 [Pseudomonas putida ND6]
gi|397332935|gb|AFO49294.1| 30S ribosomal protein S3 [Pseudomonas putida DOT-T1E]
gi|398255130|gb|EJN40170.1| ribosomal protein S3, bacterial type [Pseudomonas sp. GM84]
gi|402214261|gb|EJT85591.1| 30S ribosomal protein S3 [Pseudomonas putida S11]
gi|402751351|gb|EJX11864.1| 30S ribosomal protein S3 [Pseudomonas putida LS46]
gi|430791278|gb|AGA71473.1| 30S ribosomal protein S3 [Pseudomonas putida HB3267]
Length = 228
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 19/190 (10%)
Query: 11 FVADGVFFAE--LNEVLTRELAEDGYSGVEV-RVT---PVRT-EIIIRATRTQNVLGEKG 63
+ ADG +A+ L ++ TRE +D V R+ P +T I I R V+G+KG
Sbjct: 22 WYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L A+ A+S+ +L + RRA +
Sbjct: 82 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQ 179
+ M GAKG ++ VSG+L A+ A++ +++G + P++ ID
Sbjct: 139 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYNTYEAHTTY 193
Query: 180 GVLGIKVKIM 189
GV+G+KV I
Sbjct: 194 GVIGVKVWIF 203
>gi|118602219|ref|YP_903434.1| 30S ribosomal protein S3 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|152060901|sp|A1AVK6.1|RS3_RUTMC RecName: Full=30S ribosomal protein S3
gi|118567158|gb|ABL01963.1| SSU ribosomal protein S3P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 232
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 12/174 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ + L +L S +++ +I I R ++G+KG I +L S+V K
Sbjct: 38 KVRDYLFDKLTNASVSRIQIERLANNAKITIHTARPGIIIGKKGADIEQLKSIVSKMMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V + E++ L A AE++ +L + RRA VL GAKG +V+V+
Sbjct: 98 P---VHINIEEIKKPELDARLVAENIAQQLEKRVMYRRAVKRVLGNTTRLGAKGIKVMVN 154
Query: 140 GKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIM 189
G+L A+ A+S +++G + P++ + +D + + GV+GIKV I
Sbjct: 155 GRLNGAEIARSEWYREGRV-----PLHTFRADVDYSSYGANTQYGVIGIKVWIF 203
>gi|153210013|ref|ZP_01947564.1| ribosomal protein S3 [Coxiella burnetii 'MSU Goat Q177']
gi|154706269|ref|YP_001425176.1| 30S ribosomal protein S3 [Coxiella burnetii Dugway 5J108-111]
gi|161830479|ref|YP_001596191.1| 30S ribosomal protein S3 [Coxiella burnetii RSA 331]
gi|165924132|ref|ZP_02219964.1| ribosomal protein S3 [Coxiella burnetii Q321]
gi|212213244|ref|YP_002304180.1| 30S ribosomal protein S3 [Coxiella burnetii CbuG_Q212]
gi|212218080|ref|YP_002304867.1| 30S ribosomal protein S3 [Coxiella burnetii CbuK_Q154]
gi|189044972|sp|A9KD25.1|RS3_COXBN RecName: Full=30S ribosomal protein S3
gi|189044973|sp|A9NAN0.1|RS3_COXBR RecName: Full=30S ribosomal protein S3
gi|226697691|sp|B6J5D8.1|RS3_COXB1 RecName: Full=30S ribosomal protein S3
gi|226697692|sp|B6J257.1|RS3_COXB2 RecName: Full=30S ribosomal protein S3
gi|120575196|gb|EAX31820.1| ribosomal protein S3 [Coxiella burnetii 'MSU Goat Q177']
gi|154355555|gb|ABS77017.1| SSU ribosomal protein S3P [Coxiella burnetii Dugway 5J108-111]
gi|161762346|gb|ABX77988.1| ribosomal protein S3 [Coxiella burnetii RSA 331]
gi|165916414|gb|EDR35018.1| ribosomal protein S3 [Coxiella burnetii Q321]
gi|212011654|gb|ACJ19035.1| SSU ribosomal protein S3P [Coxiella burnetii CbuG_Q212]
gi|212012342|gb|ACJ19722.1| SSU ribosomal protein S3P [Coxiella burnetii CbuK_Q154]
Length = 227
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 24/218 (11%)
Query: 11 FVADGVFFAE-LNEVLT-RELAEDGYSGVEV-RVT---PVRT-EIIIRATRTQNVLGEKG 63
+ AD FA+ LNE L R+L + G V R+ P R +III + R ++G+KG
Sbjct: 22 WYADKKDFADRLNEDLNVRQLLQKRLKGAAVSRIQIERPARNAKIIIHSARPGVIIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I L + K K P V + E+V L A AE++ +L + RRA +
Sbjct: 82 GEIEALRDEISKVMKVP---VHITIEEVRKPELDAKLVAENIAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQ 179
+ + GA G ++ VSG+L A+ A++ +++G + P++ + ID A
Sbjct: 139 QNTLRQGALGVKISVSGRLGGAEIARTEWYREGRV-----PLHTFRADIDYATASAKTTY 193
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
G++G+KV W KG+ P + +EEV
Sbjct: 194 GIIGVKV-----WIFKGEVHAPKPQAEEAAPQETEEEV 226
>gi|224373643|ref|YP_002608015.1| 30S ribosomal protein S3 [Nautilia profundicola AmH]
gi|254764538|sp|B9L6M7.1|RS3_NAUPA RecName: Full=30S ribosomal protein S3
gi|223589411|gb|ACM93147.1| ribosomal protein S3 [Nautilia profundicola AmH]
Length = 240
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
EL + L ++L G S + + T + I I A + ++G+ G I L + +QKR
Sbjct: 38 ELRKFLKKKLYYAGISDIIIERTAKKIRITIFAAKPGIIIGKGGSEIEALKAELQKRIGN 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
E + + E+ L A AE++ ++ +A RRA V++ ++SGAKG +V V+
Sbjct: 98 KELILNIKEERKPQ--LSAQLAAENVATQIERRVAFRRAMKKVIQSALKSGAKGIKVQVA 155
Query: 140 GKLR-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
G+L A+ A++ + +G + + ID L G++G+KV I
Sbjct: 156 GRLNGAEMARTEWYLEGRV--PLHTLRAKIDYGFAEALTTYGIIGVKVWIF 204
>gi|255536148|ref|YP_003096519.1| 30S ribosomal protein S3 [Flavobacteriaceae bacterium 3519-10]
gi|255342344|gb|ACU08457.1| SSU ribosomal protein S3p (S3e) [Flavobacteriaceae bacterium
3519-10]
Length = 251
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 25 LTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSV 84
L L++ G S + + T + I R ++G+ G+ + +L ++K + +
Sbjct: 42 LEARLSKGGISRIYIERTLKLVTVTITTARPGLIIGKGGQEVDKLKEELKK---ITDKDI 98
Query: 85 ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR- 143
++ ++ L A+ A+S+ ++ ++ RRA ++ M GA+G +V +SG+L
Sbjct: 99 QINIFEIKRPELDAVLVADSIAKQIENRISYRRAVKMSIQSTMRMGAEGIKVQISGRLNG 158
Query: 144 AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIM 189
A+ A+S FKDG + P++ + ID + L + G LG+KV IM
Sbjct: 159 AEMARSESFKDGRI-----PLSTFRADIDYHIGEALTQYGKLGVKVWIM 202
>gi|313893202|ref|ZP_07826779.1| ribosomal protein S3 [Veillonella sp. oral taxon 158 str. F0412]
gi|313442555|gb|EFR60970.1| ribosomal protein S3 [Veillonella sp. oral taxon 158 str. F0412]
Length = 221
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 23/206 (11%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD F A L+E L L G S +E+ T R ++ I + V+G G
Sbjct: 21 KWYADKDFAANLHEDVKIRNFLKETLFIAGISRIEIERTNKRIKLTIHTAKPGMVIGRGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ + + F + V++ ++ + A AE++ +L + RRA +
Sbjct: 81 AGIEDIKKAMTR---FTDKQVDVNIAEIKQADMDATLVAENIAGQLERRIGFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQ 179
M GAKG +++VSG+L A+ A+S +++G + P++ ID
Sbjct: 138 GRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSI-----PLHTLRADIDYGTAEAHTTY 192
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLP 205
G +GIKV W KG+ P P
Sbjct: 193 GCIGIKV-----WIYKGEVLPEAKQP 213
>gi|210631088|ref|ZP_03296744.1| hypothetical protein COLSTE_00629 [Collinsella stercoris DSM 13279]
gi|210160176|gb|EEA91147.1| ribosomal protein S3 [Collinsella stercoris DSM 13279]
Length = 236
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 8/189 (4%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ L + LA S VE+ + ++II R V+G+KG I L + +++
Sbjct: 37 EIRRFLEKRLARAAVSRVEIERAGDKVKVIILTARPGVVIGKKGSEIDGLRTELERVAGV 96
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ ++ + +V L A+ A+S+ +L G +A RRA ++ ++GAKG + S
Sbjct: 97 TKGNLSVDVIEVKRPELDAVLVAQSIAEQLEGRVAFRRAMRKAVQSARKAGAKGIRIQCS 156
Query: 140 GKL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQ 198
G+L A+ + +++G + + ID G G+KV W +G++
Sbjct: 157 GRLGGAEMGRREWYREGRVPL--HTLRAKIDYGTATAHTTMGSCGVKV-----WIYQGEK 209
Query: 199 GPTTPLPDL 207
P P+P++
Sbjct: 210 LPGQPVPNM 218
>gi|342214879|ref|ZP_08707550.1| ribosomal protein S3 [Veillonella sp. oral taxon 780 str. F0422]
gi|341590410|gb|EGS33653.1| ribosomal protein S3 [Veillonella sp. oral taxon 780 str. F0422]
Length = 221
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 12/186 (6%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD F + L+E L + L G S +E+ T R ++ I + V+G+ G
Sbjct: 21 KWYADKDFASNLHEDVKIRTFLKKTLFIAGISRIEIERTNKRIKVTIHTAKPGMVIGKGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ I ++ +++ F + +++ ++ + A AES+ +L ++ RRA +
Sbjct: 81 QGIEDIRKELKR---FTDKQIDVNIAEIKQVDMEAQLVAESIASQLERRVSFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
M GA G +V+VSG+L A+ A+S +++G + N ID A G +
Sbjct: 138 GRTMRLGANGIKVMVSGRLGGAEIARSESYREGSIPLHTLRAN--IDYATAEAHTTYGCI 195
Query: 183 GIKVKI 188
GIKV I
Sbjct: 196 GIKVWI 201
>gi|402836649|ref|ZP_10885183.1| ribosomal protein S3 [Mogibacterium sp. CM50]
gi|402270568|gb|EJU19828.1| ribosomal protein S3 [Mogibacterium sp. CM50]
Length = 287
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 20/191 (10%)
Query: 10 KFVADGVFFAEL----NEV---LTRELAEDGYSGVEV-RVTPVRTEIIIRATRTQNVLGE 61
K+ AD FA+ N+V + ++L G + V + R + +III R V+G
Sbjct: 21 KWYADKTNFADFLVEDNKVRNYVKKKLYAAGVASVVIERPAADKVKIIIATARPGMVIGR 80
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
G I EL + K +VE+ E+V L A AES+ L ++ RRA
Sbjct: 81 AGDGIDELKKSL---IKLTGKTVEISIEEVRRSELDAQLTAESIAQALERRVSFRRAMKS 137
Query: 122 VLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLL 177
++ +++GAKG +V+VSG+L A+ A+S K+ +G + P++ ID
Sbjct: 138 AIQRTVKAGAKGIKVLVSGRLGGAEIARSEKYSEGNV-----PLHTLRADIDYGFAEADT 192
Query: 178 RQGVLGIKVKI 188
G +G+KV I
Sbjct: 193 TYGKIGVKVWI 203
>gi|303230141|ref|ZP_07316910.1| ribosomal protein S3 [Veillonella atypica ACS-134-V-Col7a]
gi|303231249|ref|ZP_07317987.1| ribosomal protein S3 [Veillonella atypica ACS-049-V-Sch6]
gi|401680975|ref|ZP_10812884.1| ribosomal protein S3 [Veillonella sp. ACP1]
gi|429760920|ref|ZP_19293368.1| ribosomal protein S3 [Veillonella atypica KON]
gi|302514156|gb|EFL56160.1| ribosomal protein S3 [Veillonella atypica ACS-049-V-Sch6]
gi|302515202|gb|EFL57175.1| ribosomal protein S3 [Veillonella atypica ACS-134-V-Col7a]
gi|400218030|gb|EJO48916.1| ribosomal protein S3 [Veillonella sp. ACP1]
gi|429176108|gb|EKY17509.1| ribosomal protein S3 [Veillonella atypica KON]
Length = 221
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ A+ F A L+E L L G S +E+ T R ++ I + V+G G
Sbjct: 21 KWYAEKDFAANLHEDVKIRNFLKETLFIAGISRIEIERTNKRIKLTIHTAKPGMVIGRGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ + + F + V++ ++ + A+ AE++ +L + RRA +
Sbjct: 81 AGIEDIKKAMTR---FTDKQVDVNIAEIKQADMDAVLVAENIAGQLERRIGFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
M GAKG +++VSG+L A+ A+S +++G + N ID G +
Sbjct: 138 GRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSIPLHTLRAN--IDYGTAEAHTTYGCI 195
Query: 183 GIKVKIMLEWDQKGKQGPTTPLP 205
GIKV W KG+ P P
Sbjct: 196 GIKV-----WIYKGEVLPEAKQP 213
>gi|300767827|ref|ZP_07077737.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308180017|ref|YP_003924145.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|380031973|ref|YP_004888964.1| 30S ribosomal protein S3 [Lactobacillus plantarum WCFS1]
gi|392948145|ref|ZP_10313760.1| SSU ribosomal protein S3p (S3e) [Lactobacillus pentosus KCA1]
gi|418274605|ref|ZP_12890103.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
NC8]
gi|448820604|ref|YP_007413766.1| 30S ribosomal protein S3 [Lactobacillus plantarum ZJ316]
gi|38258338|sp|Q88XY0.1|RS3_LACPL RecName: Full=30S ribosomal protein S3
gi|300494812|gb|EFK29970.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045508|gb|ADN98051.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|334882662|emb|CCB83707.1| 30S ribosomal protein S3 [Lactobacillus pentosus MP-10]
gi|339637291|emb|CCC16190.1| 30S ribosomal protein S3 [Lactobacillus pentosus IG1]
gi|342241216|emb|CCC78450.1| 30S ribosomal protein S3 [Lactobacillus plantarum WCFS1]
gi|376010171|gb|EHS83497.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
NC8]
gi|392436590|gb|EIW14499.1| SSU ribosomal protein S3p (S3e) [Lactobacillus pentosus KCA1]
gi|448274101|gb|AGE38620.1| 30S ribosomal protein S3 [Lactobacillus plantarum ZJ316]
Length = 217
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ A+ F A LNE L + LA+ S VE+ R I I + V+G+ G
Sbjct: 21 KWYAEKDFAAYLNEDLRIRKYIEQRLADASVSTVEIERAANRVNISIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL ++ KR N +E + L A ES+ +L G +A RRA
Sbjct: 81 SEVEALRKELNNLTGKRVHI--NIIE-----IKKPDLDAKLVGESIARQLEGRVAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
G ++ M SGAKG + V+G+L A ++ + DG
Sbjct: 134 RGAMQRTMRSGAKGIKTQVAGRLNGADMSRVEAYSDG 170
>gi|71083798|ref|YP_266518.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1062]
gi|91207827|sp|Q4FLM4.1|RS3_PELUB RecName: Full=30S ribosomal protein S3
gi|71062911|gb|AAZ21914.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1062]
Length = 226
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 25 LTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSV 84
+ + + G S V + T + + I +R V+G+KG I ++ + + K F N V
Sbjct: 43 IKKNVVNSGVSKVMIERTSNKCFVTIYTSRPGFVIGKKGSDIDKIKNNLSK---FTNNEV 99
Query: 85 ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA 144
L ++V A AE++ +L+ ++ RRA ++ + GAKG +V +SG+L
Sbjct: 100 TLNIKEVKKPETNAYLVAENIAQQLVKRISYRRAMKRAMQSCLRLGAKGIKVSISGRLGG 159
Query: 145 QR-AKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
A++ ++G + S + ID A L G++GIK+ I
Sbjct: 160 NEIARTEWLREGSIPS--HTLRADIDYAEAEALTTFGIIGIKIWI 202
>gi|254468886|ref|ZP_05082292.1| ribosomal protein S3 [beta proteobacterium KB13]
gi|207087696|gb|EDZ64979.1| ribosomal protein S3 [beta proteobacterium KB13]
Length = 282
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 23 EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
E L ++LA S + + ++ I R V+G+KG I L S +Q P
Sbjct: 41 EFLNKKLANAAVSKIIIERPAKNAKVTIMTARPGIVIGKKGEDIENLRSDLQGLMGIP-- 98
Query: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
V+L E+V + A A+S+ +L + RRA ++ M GA+G +++ SG+L
Sbjct: 99 -VQLNIEEVRKPEIDATLIAQSIAQQLEKRVQFRRAMKRAMQNAMRLGAQGIKIMSSGRL 157
Query: 143 RA-QRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
+ A+S +++G + P++ ID V + G++GIKV I
Sbjct: 158 NGIEIARSEWYREGRV-----PLHTLRADIDYGVARAQTQYGIIGIKVWI 202
>gi|429727115|ref|ZP_19261894.1| ribosomal protein S3 [Prevotella sp. oral taxon 473 str. F0040]
gi|429144819|gb|EKX87926.1| ribosomal protein S3 [Prevotella sp. oral taxon 473 str. F0040]
Length = 262
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 42 TPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQ 101
TP I + +R ++G+ G+ + +L +QK V++ +V L A
Sbjct: 77 TPKLVTITVCTSRPGMIIGQGGKDVEQLKLQLQK---ITNKDVQINIFEVKKPDLDANIV 133
Query: 102 AESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISS 160
A+S+ ++ G +A RRA + M GA+G ++ +SG+L A+ A+S +K+G
Sbjct: 134 AKSIARQIEGKIAYRRAIKKAIENTMRGGAEGIKIQISGRLNGAEIARSEMYKEGRT--- 190
Query: 161 GQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
P++ + ID L + G+LGIKV I
Sbjct: 191 --PLHTFRADIDYCQTEALTKVGILGIKVWI 219
>gi|289209323|ref|YP_003461389.1| 30S ribosomal protein S3 [Thioalkalivibrio sp. K90mix]
gi|288944954|gb|ADC72653.1| ribosomal protein S3 [Thioalkalivibrio sp. K90mix]
Length = 226
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 16/190 (8%)
Query: 11 FVADGVFFAE-------LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+ ADG F E L E L ++LA S + + I I+ R V+G+KG
Sbjct: 22 WYADGREFGETLNNDIKLREFLQKKLAHASVSRISISRPAKAAHITIQTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I +L V + + +V++ E+V + A AE + +L + RRA +
Sbjct: 82 EDIEKLRQDVARETGLEKGTVKINIEEVRKPEIEAQLVAEGIAQQLERRIMFRRAMKRAV 141
Query: 124 RFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQ 179
M GA+G +V VSG+L A+ A+S +++G + P++ ID
Sbjct: 142 GNAMRLGAQGIKVHVSGRLNGAEIARSEWYREGRV-----PLHTLRADIDYGFAEARTTY 196
Query: 180 GVLGIKVKIM 189
G++G+KV I
Sbjct: 197 GIIGVKVWIF 206
>gi|91763166|ref|ZP_01265130.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1002]
gi|91717579|gb|EAS84230.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1002]
Length = 226
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 25 LTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSV 84
+ + + G S V + T + + I +R V+G+KG I ++ + + K F N V
Sbjct: 43 IKKNVVNSGVSKVMIERTSNKCFVTIYTSRPGFVIGKKGSDIDKIKNNLSK---FTNNEV 99
Query: 85 ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA 144
L ++V A AE++ +L+ ++ RRA ++ + GAKG +V +SG+L
Sbjct: 100 TLNIKEVKKPETNAYLVAENIAQQLVKRISYRRAMKRAMQSCLRLGAKGIKVSISGRLGG 159
Query: 145 QR-AKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
A++ ++G + S + ID A L G++GIK+ I
Sbjct: 160 NEIARTEWLREGSIPS--HTLRADIDYAEAEALTTFGIIGIKIWI 202
>gi|260424860|ref|ZP_05779019.1| ribosomal protein S3 [Dialister invisus DSM 15470]
gi|260403417|gb|EEW96964.1| ribosomal protein S3 [Dialister invisus DSM 15470]
Length = 248
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 19 AELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFK 78
A++ + L + L G S + ++ R +I I + V+G G I ++ +
Sbjct: 27 AKIRQFLKKHLFVAGISKIGIKRVGTRIKIAIYTAKPGMVIGRGGTGIEDIKKALAA--- 83
Query: 79 FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
+ V++ ++ ++ + AI E + +L + RRA + M GAKG +V V
Sbjct: 84 VTDKEVDIDILEIKSKDMSAILVGEDIASQLERRIGFRRAVKQAVGRTMRMGAKGIKVTV 143
Query: 139 SGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGK 197
SG+L A+ A+S +++G + Q + ID AV G +GIKV W KG+
Sbjct: 144 SGRLGGAEIARSESYREGSI--PLQTLRANIDYAVATAHTTYGAIGIKV-----WIYKGE 196
Query: 198 QGPTTPLPDLVTIHPLKE 215
P + + I K+
Sbjct: 197 LAPGQTVDENENIRTSKD 214
>gi|15599453|ref|NP_252947.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO1]
gi|107103770|ref|ZP_01367688.1| hypothetical protein PaerPA_01004841 [Pseudomonas aeruginosa PACS2]
gi|116052292|ref|YP_788862.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa UCBPP-PA14]
gi|152987607|ref|YP_001346229.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PA7]
gi|218889415|ref|YP_002438279.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa LESB58]
gi|296387186|ref|ZP_06876685.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAb1]
gi|313111411|ref|ZP_07797216.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 39016]
gi|355652608|ref|ZP_09056868.1| 30S ribosomal protein S3 [Pseudomonas sp. 2_1_26]
gi|386056742|ref|YP_005973264.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa M18]
gi|386068404|ref|YP_005983708.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa NCGM2.S1]
gi|392982085|ref|YP_006480672.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa DK2]
gi|416860418|ref|ZP_11914257.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 138244]
gi|416877964|ref|ZP_11920095.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 152504]
gi|418587988|ref|ZP_13152006.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa MPAO1/P1]
gi|418589188|ref|ZP_13153116.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa MPAO1/P2]
gi|419756646|ref|ZP_14282991.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PADK2_CF510]
gi|420137284|ref|ZP_14645274.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa CIG1]
gi|421151765|ref|ZP_15611367.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 14886]
gi|421157752|ref|ZP_15617097.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 25324]
gi|421165614|ref|ZP_15623936.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 700888]
gi|421172458|ref|ZP_15630228.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa CI27]
gi|421178591|ref|ZP_15636201.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa E2]
gi|421518807|ref|ZP_15965481.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO579]
gi|424938879|ref|ZP_18354642.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa NCMG1179]
gi|451982938|ref|ZP_21931236.1| SSU ribosomal protein S3p (S3e) [Pseudomonas aeruginosa 18A]
gi|452877877|ref|ZP_21955126.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa VRFPA01]
gi|27734535|sp|Q9HWE1.1|RS3_PSEAE RecName: Full=30S ribosomal protein S3
gi|122261441|sp|Q02T74.1|RS3_PSEAB RecName: Full=30S ribosomal protein S3
gi|171460872|sp|A6UZJ4.1|RS3_PSEA7 RecName: Full=30S ribosomal protein S3
gi|9950474|gb|AAG07645.1|AE004841_23 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO1]
gi|115587513|gb|ABJ13528.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa UCBPP-PA14]
gi|150962765|gb|ABR84790.1| ribosomal protein S3 [Pseudomonas aeruginosa PA7]
gi|218769638|emb|CAW25398.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa LESB58]
gi|310883718|gb|EFQ42312.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 39016]
gi|334837550|gb|EGM16307.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 138244]
gi|334838983|gb|EGM17683.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 152504]
gi|346055325|dbj|GAA15208.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa NCMG1179]
gi|347303048|gb|AEO73162.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa M18]
gi|348036963|dbj|BAK92323.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa NCGM2.S1]
gi|354823946|gb|EHF08209.1| 30S ribosomal protein S3 [Pseudomonas sp. 2_1_26]
gi|375041227|gb|EHS33937.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa MPAO1/P1]
gi|375051950|gb|EHS44411.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa MPAO1/P2]
gi|384396401|gb|EIE42819.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PADK2_CF510]
gi|392317590|gb|AFM62970.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa DK2]
gi|403249930|gb|EJY63396.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa CIG1]
gi|404348289|gb|EJZ74638.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO579]
gi|404526637|gb|EKA36839.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 14886]
gi|404537724|gb|EKA47307.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa CI27]
gi|404541176|gb|EKA50544.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 700888]
gi|404548195|gb|EKA57159.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa E2]
gi|404550277|gb|EKA59038.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 25324]
gi|451759407|emb|CCQ83759.1| SSU ribosomal protein S3p (S3e) [Pseudomonas aeruginosa 18A]
gi|452185433|gb|EME12451.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa VRFPA01]
gi|453042436|gb|EME90180.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PA21_ST175]
Length = 228
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 9 RKFVADGVFFAELN--EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
RK AD FA+L E L +L S +++ I I R V+G+KG +
Sbjct: 26 RKNYAD-YLFADLKVREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGEDV 84
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
+L + K+ P V + E++ L A+ A+S+ +L + RRA ++
Sbjct: 85 EKLRQDLTKQMGVP---VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAVQNA 141
Query: 127 MESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVL 182
M GAKG ++ VSG+L A+ A++ +++G + P++ ID A GV+
Sbjct: 142 MRIGAKGIKIQVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYATYEAHTTYGVI 196
Query: 183 GIKVKIMLEWDQKGKQ---GPTTPLP 205
G+KV I G+Q P P P
Sbjct: 197 GVKVWIFKGEVIGGRQEELKPVAPAP 222
>gi|367470164|ref|ZP_09469880.1| SSU ribosomal protein S3p (S3e) [Patulibacter sp. I11]
gi|365814742|gb|EHN09924.1| SSU ribosomal protein S3p (S3e) [Patulibacter sp. I11]
Length = 281
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 17 FFAELNEVLTR---ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI----REL 69
F E ++ T +LA G S + +R E+ IR R V+G+ G + ++L
Sbjct: 31 FLDEDRQIRTHIQTKLAHAGLSDITIRKNKNEVEVSIRTARPGVVIGKSGVEVDALRKDL 90
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
+ +K+ K N +E+ +++ + L A + AE L+ ++ A RRA L M S
Sbjct: 91 HRITKKQVKV--NILEVRRPELDAK-LVAQSVAEQLQNRV----AFRRAMKRALTSAMRS 143
Query: 130 GAKGCEVIVSGKL-RAQRAKSMKFKDG 155
GAKGC++ V G+L A+ +++ ++DG
Sbjct: 144 GAKGCKIQVGGRLGGAEMSRTESYQDG 170
>gi|406915550|gb|EKD54621.1| hypothetical protein ACD_60C00063G0026 [uncultured bacterium]
Length = 228
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 12/174 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L +LA+ G S +++ +I + R ++G+ G+ + L + K K
Sbjct: 38 KVREYLYEKLAQAGISRIQIDRPARNAKITVYTARPGVIIGKSGKEVETLRDEINKILKV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V + E+V L A AE++ +L + RRA V+ M GAKG ++ VS
Sbjct: 98 P---VHVSIEEVRKPELDAKLVAEAVAQQLEKRVMFRRAMKRVVTTAMRLGAKGIKICVS 154
Query: 140 GKLRAQR-AKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIM 189
G+L A+S +++G + P++ ID + GV+G+KV I
Sbjct: 155 GRLGGTEIARSEWYREGRV-----PLHTLRADIDYGLAEAFTTYGVIGVKVWIF 203
>gi|15805346|ref|NP_294040.1| 30S ribosomal protein S3 [Deinococcus radiodurans R1]
gi|27734542|sp|Q9RXJ6.1|RS3_DEIRA RecName: Full=30S ribosomal protein S3
gi|6457991|gb|AAF09898.1|AE001892_9 ribosomal protein S3 [Deinococcus radiodurans R1]
Length = 249
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 11/171 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ +++ ++LA G + +E+ + +II A + V+G+ G I+EL +++
Sbjct: 38 QIRQLINKKLAAAGIARIEIERAGQQVNVIISAAKPGVVIGKGGESIKELRGDIERLVS- 96
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+V + ++ N + A A + ++ A RRA + +MESGA+G +VI+S
Sbjct: 97 -AGTVAVNVAEIPNPNISAPLVALRIAEQIERRFAFRRAMKQAAQRVMESGARGVKVILS 155
Query: 140 GKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKV 186
G+L A++A++ K +G + P++ ID G+LGIKV
Sbjct: 156 GRLGGAEQARTEKVLEGRV-----PLHTLRADIDYGTALARTTYGILGIKV 201
>gi|410638210|ref|ZP_11348774.1| small subunit ribosomal protein S3 [Glaciecola lipolytica E3]
gi|410142130|dbj|GAC15979.1| small subunit ribosomal protein S3 [Glaciecola lipolytica E3]
Length = 233
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 17/184 (9%)
Query: 13 ADGVFF-AELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
AD +F ++ + LT+EL S + + + I R V+G+KG + +L
Sbjct: 30 ADNLFNDHQVRKYLTKELKNASLSKIVIERPAKSIRVTIHTARPGVVIGKKGEDVEKLRK 89
Query: 72 VVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
V K P N E+ +++ + L A + + L +++ A++RA +R
Sbjct: 90 FVSKLAGVPAQINIAEVRKPELDGQ-LVADSISSQLERRVMFRRAMKRAVQNAMRL---- 144
Query: 130 GAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIK 185
GAKG +V VSG+L A+ A+S +++G + P++ + ID A L G++G+K
Sbjct: 145 GAKGIKVEVSGRLGGAEIARSEWYREGRV-----PLHTFRADIDYATSEALTTYGIIGVK 199
Query: 186 VKIM 189
V I
Sbjct: 200 VWIF 203
>gi|291296985|ref|YP_003508383.1| 30S ribosomal protein S3 [Meiothermus ruber DSM 1279]
gi|290471944|gb|ADD29363.1| ribosomal protein S3 [Meiothermus ruber DSM 1279]
Length = 253
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ ++ +EL + G + +++ +++ A + V+G G I+ L +Q RF P
Sbjct: 39 IRALIEKELHQAGLARIDIERAADNVTVMVYAAKPGVVIGRGGETIKRLRETLQSRF--P 96
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V L ++V N L A A+ + ++ AVRR+ ++ + ESGA G +++VSG
Sbjct: 97 GKTVALNVQEVGNPNLSAPLVAQRVAEQIERRFAVRRSIKQAVQRVRESGALGAKIVVSG 156
Query: 141 KL 142
++
Sbjct: 157 RI 158
>gi|374386806|ref|ZP_09644303.1| 30S ribosomal protein S3 [Odoribacter laneus YIT 12061]
gi|373223367|gb|EHP45717.1| 30S ribosomal protein S3 [Odoribacter laneus YIT 12061]
Length = 242
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ + L LA+ G + + + T I I R ++G+ G+ + +L ++K
Sbjct: 37 KIRKYLNARLAKAGIAKIVIERTLKLITITINTARPGIIIGKGGQEVDKLKEELKK---I 93
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ V++ ++ L A+ ++ +L G +A RRA ++ M GA+G +V++S
Sbjct: 94 TDKEVQINIFEIKRPELDAVIVGNNIARQLEGRVAYRRAIKMAVQSTMRMGAEGIKVLIS 153
Query: 140 GKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A++ FK+G + P++ + ID A L G+LGIKV I
Sbjct: 154 GRLNGAEMARAEIFKEGRI-----PLHTFRADIDYAQAEALTTYGLLGIKVWI 201
>gi|269104018|ref|ZP_06156715.1| SSU ribosomal protein S3p (S3e) [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163916|gb|EEZ42412.1| SSU ribosomal protein S3p (S3e) [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 232
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 18/182 (9%)
Query: 14 DGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
DG F ++ + LT+ELA+ S + + + I R V+G+KG + +L + V
Sbjct: 34 DGDF--KVRQFLTKELAKASLSRIVIERPAKSIRVTIHTARPGVVIGKKGEDVEKLRAAV 91
Query: 74 QKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
K P N E+ +++ + L A + A L +++ A++RA +R GA
Sbjct: 92 AKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKRAVQNAMRL----GA 146
Query: 132 KGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVK 187
KG +V VSG+L A+ A++ +++G + P++ ID A + GV+GIKV
Sbjct: 147 KGIKVEVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYATSSAHTQYGVIGIKVW 201
Query: 188 IM 189
I
Sbjct: 202 IF 203
>gi|15605251|ref|NP_220037.1| 30S ribosomal protein S3 [Chlamydia trachomatis D/UW-3/CX]
gi|385243729|ref|YP_005811575.1| 30S ribosomal protein S3 [Chlamydia trachomatis D-EC]
gi|385244609|ref|YP_005812453.1| 30S ribosomal protein S3 [Chlamydia trachomatis D-LC]
gi|7388191|sp|O84527.1|RS3_CHLTR RecName: Full=30S ribosomal protein S3
gi|3328959|gb|AAC68123.1| S3 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
gi|297748652|gb|ADI51198.1| SSU ribosomal protein S3P [Chlamydia trachomatis D-EC]
gi|297749532|gb|ADI52210.1| SSU ribosomal protein S3P [Chlamydia trachomatis D-LC]
gi|440525446|emb|CCP50697.1| 30S ribosomal protein S3 [Chlamydia trachomatis K/SotonK1]
gi|440528123|emb|CCP53607.1| 30S ribosomal protein S3 [Chlamydia trachomatis D/SotonD5]
gi|440529013|emb|CCP54497.1| 30S ribosomal protein S3 [Chlamydia trachomatis D/SotonD6]
gi|440532587|emb|CCP58097.1| 30S ribosomal protein S3 [Chlamydia trachomatis G/SotonG1]
Length = 224
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
KF+ + V ++ E L ++ + G +G V+ + E+ I R V+G+KG + L
Sbjct: 31 KFLIEDV---KIREFLKKKPSCQGAAGFVVKRMSGKIEVTIHTARPGLVIGKKGAEVESL 87
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
+ ++K + V + +V L A A+ + ++ ++ RRA L+ +M++
Sbjct: 88 KAELKK---LTDKDVWVEIAEVKRPELNAQLVADGIAKQIERRVSFRRAMKKALQSVMDA 144
Query: 130 GAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIK 185
GA G +V VSG+L A+ A+S +K+G + P++ ID A G++GIK
Sbjct: 145 GALGVKVQVSGRLAGAEIARSEWYKNGRV-----PLHTLRADIDYATASAETTYGIIGIK 199
Query: 186 VKIML 190
V I L
Sbjct: 200 VWINL 204
>gi|226968560|ref|YP_002808513.1| small subunit ribosomal protein S3 [Micromonas pusilla CCMP1545]
gi|226348855|gb|ACO50758.1| small subunit ribosomal protein S3 [Micromonas pusilla CCMP1545]
Length = 227
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 12/190 (6%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR---RIRELTSVVQKRF 77
+ + + + L++ S V + R EI R + ++G KG ++RE S
Sbjct: 39 IRDYVAKHLSDASISRVNISRQVDRIEIEFFTARPRALVGAKGEALVKVREALSA----- 93
Query: 78 KFPEN-SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV 136
K P + SV LY K + A+ AE++ +L RR LR ++GA G +V
Sbjct: 94 KLPAHRSVALYVTKTVQPEVDAVCIAENIAMQLEKRAPFRRTIRQALRSAQQAGAVGIKV 153
Query: 137 IVSGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQK 195
++G+L A+ A+S ++G + + ID A L G+LGIKV + + ++
Sbjct: 154 KIAGRLNGAEIARSEWSREGRV--PLHTIRADIDYATARALTVYGILGIKVWVCKDDTER 211
Query: 196 GKQGPTTPLP 205
K P+ P
Sbjct: 212 FKPQPSASAP 221
>gi|257067054|ref|YP_003153310.1| 30S ribosomal protein S3 [Anaerococcus prevotii DSM 20548]
gi|256798934|gb|ACV29589.1| ribosomal protein S3 [Anaerococcus prevotii DSM 20548]
Length = 238
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 10 KFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
K+ AD F++L +++ +E+ + G S +E+ +I + A + V+G+
Sbjct: 21 KWFADKKDFSDLLVEDYNIRKIVKKEVYDAGISDIEIERAVNNLKITVFAGKPGMVIGKG 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G + EL ++K P + + E++ + L A AE++ +L +A RRA
Sbjct: 81 GSGVEELKKKLEKVA--PGRRIIINVEEIKYQDLSAQLVAENIANQLENRVAFRRAMKQS 138
Query: 123 LRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
++ M +GAKG + +VSG+L A A+S + +G + Q + ID G
Sbjct: 139 MQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEGTIPL--QTLRANIDYGFAEADTEYGK 196
Query: 182 LGIKVKI 188
+G KV I
Sbjct: 197 IGCKVWI 203
>gi|406948557|gb|EKD79248.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 250
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 28 ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87
+L + G S VE+R + I IR ++ ++G G + EL ++++F F ++++
Sbjct: 46 KLRDGGVSRVEIRRANDQMNIHIRTSKPGVIIGRSGAGVEELKRQIKRQF-FGSEKMKIF 104
Query: 88 AE--KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
E +V N + A + + ++L + RRA + +M+ GAKG ++IVSG+L
Sbjct: 105 IEIEEVRNPDIDAELIMQGIVFQLEKRIPFRRAMKRAIEQVMQGGAKGVKIIVSGRL 161
>gi|118595329|ref|ZP_01552676.1| 30S ribosomal protein S3 [Methylophilales bacterium HTCC2181]
gi|118441107|gb|EAV47734.1| 30S ribosomal protein S3 [Methylophilales bacterium HTCC2181]
Length = 292
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 10 KFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
K+ ++ FA L E L ++LA S + + +I I + R V+G+K
Sbjct: 21 KWYSNSKNFASLLQNDIKVREFLNKKLANAAVSRIVIERPAKNAKITIYSARPGIVIGKK 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G I L S +Q P V+L E++ + A A+S+ +L + RRA
Sbjct: 81 GEDIETLRSSLQSLMGIP---VQLNIEEIRKPEVDATLIAQSIAQQLEKRVMFRRAMKRA 137
Query: 123 LRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLR 178
++ M GA+G +++ SG+L + A+S +++G + P++ ID V
Sbjct: 138 MQNAMRLGAQGVKIMSSGRLNGIEIARSEWYREGRV-----PLHTLRADIDYGVARAQTT 192
Query: 179 QGVLGIKVKIM 189
G++GIKV I
Sbjct: 193 YGIIGIKVWIF 203
>gi|312870506|ref|ZP_07730625.1| ribosomal protein S3 [Lactobacillus oris PB013-T2-3]
gi|417886842|ref|ZP_12530986.1| ribosomal protein S3 [Lactobacillus oris F0423]
gi|311093968|gb|EFQ52293.1| ribosomal protein S3 [Lactobacillus oris PB013-T2-3]
gi|341593233|gb|EGS36090.1| ribosomal protein S3 [Lactobacillus oris F0423]
Length = 221
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD F LNE L + LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYADKDFANYLNEDLRIRKYIEKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL + KR N VE+ L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNKLTGKRVHI--NIVEIKKPD-----LDAHLVGESIARQLEARIAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHV 175
G ++ M +GAKG + V+G+L A ++ + DG + P++ ID +
Sbjct: 134 RGAMQRAMRAGAKGIKTQVAGRLNGADMSRVESYSDGTV-----PLHTLRADIDYSWDEA 188
Query: 176 LLRQGVLGIKVKIMLEWDQKGKQGPT 201
GVLG+K W +G+ PT
Sbjct: 189 NTTYGVLGVKT-----WIYRGEVLPT 209
>gi|335420829|ref|ZP_08551864.1| 30S ribosomal protein S3 [Salinisphaera shabanensis E1L3A]
gi|334894131|gb|EGM32338.1| 30S ribosomal protein S3 [Salinisphaera shabanensis E1L3A]
Length = 226
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 11/185 (5%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + + +LA S +++ I I R V+G+KG I +L + V +R
Sbjct: 38 EIRDFIREKLAHASVSRIQIDRPARSARITIHTARPGIVIGKKGEDIDKLRAEVSERMGV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V L E++ L A+ A+++ +L + RRA + M GA G V V+
Sbjct: 98 P---VHLSVEEIRRPELDALLVAQNIAQQLERRIMFRRAMKRAVGNAMRLGAGGIRVNVA 154
Query: 140 GKLR-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQ 198
G+L A+ A++ ++DG + + ID + GVLG+KV W KG+
Sbjct: 155 GRLNGAEIARTEWYRDGRV--PLHTLRADIDYGLAEAKTTYGVLGVKV-----WIFKGEV 207
Query: 199 GPTTP 203
T P
Sbjct: 208 FDTDP 212
>gi|406996300|gb|EKE14707.1| Ribosomal protein S3 [uncultured bacterium]
Length = 212
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 7/189 (3%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
S KR F + ++ +VL +LA + +++ R +II A + ++G G+
Sbjct: 24 FSNKRAFKDSLISDLKIRKVLMNKLAFSSVTQIDIERAINRITLIIYAVKVGMIIGRGGK 83
Query: 65 RIRELTSVV----QKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+ E+ V +K K E +++ E V L + A+ + KL+ R +
Sbjct: 84 GLEEIKQFVLDNLKKGEKVKELKIDIKIEPVKKPFLNSYYVAQLVAEKLVKNFPHRSTVH 143
Query: 121 GVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
+ +ME+GAKG ++ + G++ A+ ++ K+ G + +S + E +D A L R
Sbjct: 144 NAMNKVMEAGAKGVKIQLGGRVGGAEISRREKYFLGSVPTS--TIREDVDLARYPALTRS 201
Query: 180 GVLGIKVKI 188
G +G+KV I
Sbjct: 202 GYVGVKVWI 210
>gi|346312031|ref|ZP_08854025.1| 30S ribosomal protein S3 [Collinsella tanakaei YIT 12063]
gi|345899125|gb|EGX68976.1| 30S ribosomal protein S3 [Collinsella tanakaei YIT 12063]
Length = 236
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 8/188 (4%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + L + L+ S VE+ + ++II R V+G+KG I L + ++K
Sbjct: 37 EIRKFLNKRLSRAAVSRVEIERAGDKVKVIILTARPGIVIGKKGAEIDGLRTELEKVAGV 96
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ + + ++ L A A+S+ +L G +A RRA ++ M++GAKG + S
Sbjct: 97 AKGQLSVDVIEIKRPELDANLVAQSIAEQLEGRVAFRRAMRKAVQSAMKAGAKGIRIQCS 156
Query: 140 GKL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQ 198
G+L A+ + +++G + + ID G G+KV I L G++
Sbjct: 157 GRLGGAEMGRREWYREGRVPL--HTLRAKIDYGTSTAHTTMGSCGVKVWIYL-----GEK 209
Query: 199 GPTTPLPD 206
P P+P+
Sbjct: 210 LPGQPVPN 217
>gi|375091974|ref|ZP_09738261.1| ribosomal protein S3 [Helcococcus kunzii ATCC 51366]
gi|374562192|gb|EHR33524.1| ribosomal protein S3 [Helcococcus kunzii ATCC 51366]
Length = 240
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 13/187 (6%)
Query: 10 KFVADGVFF----AELNEV---LTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
K+ AD F AE N++ + R + G S +++ T R ++ + + ++G+
Sbjct: 21 KWFADKKEFSKLLAEDNKIRNYVKRSQFQAGVSKIDIERTLNRIKVTVNTAKPGMIIGKG 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G + EL + ++K K V + E+V N + A QAE + L + RRA
Sbjct: 81 GAGVEELKNALEKMTK---KQVIVNVEEVKNTAVNAQLQAERIASDLERRITFRRAMKQA 137
Query: 123 LRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
++ M++GAKG + VSG+L A A++ + +G + Q + ID G
Sbjct: 138 IQTTMKAGAKGMKTQVSGRLGGADMARTEGYSEGNIPL--QTLRADIDYGFAEADTTYGK 195
Query: 182 LGIKVKI 188
LG+KV I
Sbjct: 196 LGVKVWI 202
>gi|237751230|ref|ZP_04581710.1| 30s ribosomal protein s3 [Helicobacter bilis ATCC 43879]
gi|229372596|gb|EEO22987.1| 30s ribosomal protein s3 [Helicobacter bilis ATCC 43879]
Length = 229
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
RKF+ +++A ++E++ +A ++RVT V A + ++G+KG I +
Sbjct: 40 RKFLKKELYYASVSEIIIERMA------TKLRVTVV-------AAKPGLIIGKKGADIEK 86
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ ++K V + ++V A AES+ +L +A RRA V++ M+
Sbjct: 87 VKETLRK---LVNKDVAINIKEVKRAQANAQLAAESVAMQLERRVAFRRAMKKVMQQAMK 143
Query: 129 SGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
SGAKG +V VSG+L A+ A++ + +G + + ID G++G+KV
Sbjct: 144 SGAKGIKVKVSGRLAGAEMARTEWYMEGRV--PLHTLRAKIDYGFAEAATTYGIIGVKVW 201
Query: 188 IM 189
I
Sbjct: 202 IF 203
>gi|371776789|ref|ZP_09483111.1| 30S ribosomal protein S3 [Anaerophaga sp. HS1]
Length = 235
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 19 AELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFK 78
+++ + L LA+ S + + T I + R ++G+ G+ + +L ++K
Sbjct: 36 SKIRKYLNARLAKASVSRIVIERTLKLVTITVHTARPGIIIGKGGQEVDKLKEELKK--- 92
Query: 79 FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
+ V++ +V L AI A ++ +L G +A RRA + M GA+G ++ V
Sbjct: 93 ITDKEVQINIFEVKRPELDAIIVANNIARQLEGRIAYRRAVKMAIASAMRMGAEGIKIQV 152
Query: 139 SGKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIMLEWDQ 194
SG+L A+ A+S +K+G P++ + ID A L + G++GIKV I
Sbjct: 153 SGRLNGAEMARSEMYKEGRT-----PLHTFRADIDYAKAEALTKTGLIGIKVWIC----- 202
Query: 195 KGKQGPTTPLPDLVTIHPLKE 215
+G PDL + K+
Sbjct: 203 ---KGEIYGKPDLSPSYSAKD 220
>gi|336123179|ref|YP_004565227.1| 30S ribosomal protein S3P [Vibrio anguillarum 775]
gi|365539184|ref|ZP_09364359.1| 30S ribosomal protein S3 [Vibrio ordalii ATCC 33509]
gi|335340902|gb|AEH32185.1| SSU ribosomal protein S3P [Vibrio anguillarum 775]
Length = 232
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 20/196 (10%)
Query: 2 ATQISKKRKFVA--DGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
AT + + F DG F ++ + LT+EL++ S + + + I R V+
Sbjct: 20 ATWFANTKDFADNLDGDF--KVRQFLTKELSKASLSRIVIERPAKSIRVTIHTARPGVVI 77
Query: 60 GEKGRRIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+KG + +L + V K P N E+ +++ + L A + A L +++ A++R
Sbjct: 78 GKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKR 136
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVR 173
A +R GAKG +V VSG+L A+ A+S +++G + P++ ID A
Sbjct: 137 AVQNAMRL----GAKGIKVEVSGRLGGAEIARSEWYREGRV-----PLHTLRADIDYATS 187
Query: 174 HVLLRQGVLGIKVKIM 189
+ GV+G+KV I
Sbjct: 188 SAHTQYGVIGVKVWIF 203
>gi|148544690|ref|YP_001272060.1| 30S ribosomal protein S3 [Lactobacillus reuteri DSM 20016]
gi|184154043|ref|YP_001842384.1| 30S ribosomal protein S3 [Lactobacillus reuteri JCM 1112]
gi|194466947|ref|ZP_03072934.1| ribosomal protein S3 [Lactobacillus reuteri 100-23]
gi|227363813|ref|ZP_03847920.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM2-3]
gi|227543617|ref|ZP_03973666.1| 30S ribosomal protein S3 [Lactobacillus reuteri CF48-3A]
gi|325683024|ref|ZP_08162540.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM4-1A]
gi|338202941|ref|YP_004649086.1| 30S ribosomal protein S3 [Lactobacillus reuteri SD2112]
gi|423334758|ref|ZP_17312536.1| 30S ribosomal protein S3 [Lactobacillus reuteri ATCC 53608]
gi|172048239|sp|A5VLJ9.1|RS3_LACRD RecName: Full=30S ribosomal protein S3
gi|148531724|gb|ABQ83723.1| SSU ribosomal protein S3P [Lactobacillus reuteri DSM 20016]
gi|183225387|dbj|BAG25904.1| 30S ribosomal protein S3 [Lactobacillus reuteri JCM 1112]
gi|194453983|gb|EDX42880.1| ribosomal protein S3 [Lactobacillus reuteri 100-23]
gi|227071170|gb|EEI09486.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM2-3]
gi|227186457|gb|EEI66528.1| 30S ribosomal protein S3 [Lactobacillus reuteri CF48-3A]
gi|324977374|gb|EGC14325.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM4-1A]
gi|336448181|gb|AEI56796.1| 30S ribosomal protein S3 [Lactobacillus reuteri SD2112]
gi|337728279|emb|CCC03374.1| 30S ribosomal protein S3 [Lactobacillus reuteri ATCC 53608]
Length = 221
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 31/206 (15%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD F LNE L + LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYADKDFADYLNEDLRIRKYIEKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL + KR N VE+ L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNKLTGKRVHI--NIVEIKKPD-----LDAHLVGESIARQLEARIAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHV 175
G ++ M +GAKG + V+G+L A ++ + DG + P++ ID +
Sbjct: 134 RGAMQRAMRAGAKGIKTQVAGRLNGADMSRIESYSDGTV-----PLHTLRADIDYSWDEA 188
Query: 176 LLRQGVLGIKVKIMLEWDQKGKQGPT 201
GVLG+K W +G+ PT
Sbjct: 189 NTTYGVLGVKT-----WIYRGEVLPT 209
>gi|406999950|gb|EKE17419.1| hypothetical protein ACD_10C00468G0018 [uncultured bacterium]
Length = 265
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 17/193 (8%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L +LA V + + + + R V+G+KG I +L S +Q+
Sbjct: 38 KVREYLKHKLAHASVGRVLIERPAKNARVTVYSARPGVVIGKKGEDIEQLRSDLQRIMGV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V + E++ + A A+S+ +L + RRA ++ M GAKG +V+ +
Sbjct: 98 P---VHVSIEEIRKPEIDAQLIADSIAQQLEKRIMFRRAMKRAMQNAMRLGAKGIKVMSA 154
Query: 140 GKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIMLEWDQK 195
G+L A+ A+S +++G + P++ ID A L G++GIKV W K
Sbjct: 155 GRLNGAEIARSEWYREGRV-----PLHTLRADIDYATSEALTTYGIIGIKV-----WVYK 204
Query: 196 GKQGPTTPLPDLV 208
G + P++V
Sbjct: 205 GDMLDRSEQPEVV 217
>gi|288942066|ref|YP_003444306.1| 30S ribosomal protein S3 [Allochromatium vinosum DSM 180]
gi|288897438|gb|ADC63274.1| ribosomal protein S3 [Allochromatium vinosum DSM 180]
Length = 225
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 10 KFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
K+ A+ +A+L + L +ELA+ S +++ I I R V+G+K
Sbjct: 21 KWYANSKDYADLLNTDLQVRDFLRKELAKASVSRIQIDRPAKNAHITIHTARPGVVIGKK 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G I +L + V + P V + E++ L A AE + +L + RRA
Sbjct: 81 GEDIDKLRAKVSEMMGIP---VHIAIEEIRKPELDAQLVAEGIAQQLERRIMFRRAMKRS 137
Query: 123 LRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLR 178
++ M GA+G +V V+G+L A+ A+S ++G + P++ ID
Sbjct: 138 IQNTMRLGAEGIKVSVAGRLNGAEIARSEWAREGRV-----PLHTLRADIDYGFAEAKTT 192
Query: 179 QGVLGIKVKIMLEWDQKGKQGPTTPLP 205
GVLG+KV I + + G Q P P P
Sbjct: 193 YGVLGVKVWI-FKGEVFGDQLPEEPAP 218
>gi|344337603|ref|ZP_08768537.1| ribosomal protein S3 [Thiocapsa marina 5811]
gi|343802556|gb|EGV20496.1| ribosomal protein S3 [Thiocapsa marina 5811]
Length = 225
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 7/187 (3%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ L +ELA+ S +++ I I R V+G+KG I +L + V K
Sbjct: 38 EVRSFLRKELAKASVSRIQIDRPAKNAHITIHTARPGVVIGKKGEDIDKLRARVSKMMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V + E++ L A AE + +L + RRA ++ M GA+G V V+
Sbjct: 98 P---VHISIEEIRKPELDAQLVAEGIAQQLERRIMFRRAMKRAIQNTMRLGAEGVRVNVA 154
Query: 140 GKLR-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLEWDQKGKQ 198
G+L A+ A++ ++G + + ID GV+G+KV I + + G Q
Sbjct: 155 GRLNGAEIARTEWAREGRV--PLHTLRADIDYGFAEARTTYGVIGVKVWI-FKGEVFGDQ 211
Query: 199 GPTTPLP 205
P P P
Sbjct: 212 IPEEPAP 218
>gi|259502537|ref|ZP_05745439.1| 30S ribosomal protein S3 [Lactobacillus antri DSM 16041]
gi|259169489|gb|EEW53984.1| 30S ribosomal protein S3 [Lactobacillus antri DSM 16041]
Length = 221
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 26/193 (13%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD F LNE L + LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYADKDFANYLNEDLRIRKYIEKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL + KR N VE+ L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNKLTGKRVHI--NIVEIKKPD-----LDAHLVGESIARQLEARIAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHV 175
G ++ M +GAKG + V+G+L A ++ + DG + P++ ID +
Sbjct: 134 RGAMQRAMRAGAKGIKTQVAGRLNGADMSRVESYSDGTV-----PLHTLRADIDYSWDEA 188
Query: 176 LLRQGVLGIKVKI 188
GVLG+K I
Sbjct: 189 NTTYGVLGVKTWI 201
>gi|193875764|gb|ACF24518.1| 40S ribosomal protein S3 [Gymnochlora stellata]
Length = 255
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 44/67 (65%)
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVL 182
L++IM +GA+GC + + G +++R ++++F G++ +G + D ++ ++GV+
Sbjct: 160 LKYIMRNGARGCLIQIKGAHKSKRTRTVRFTRGFVSYAGGANARWTDGYHFNLKKKRGVI 219
Query: 183 GIKVKIM 189
GIK+KI+
Sbjct: 220 GIKIKIL 226
>gi|330752354|emb|CBL87307.1| ribosomal protein S3 [uncultured Sphingobacteria bacterium]
Length = 247
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 15/184 (8%)
Query: 15 GVFFAELNEV---LTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
GV AE N++ L + G S + + R I + +R V+G+ G + +L
Sbjct: 29 GVKLAEDNKIRKYLNARMPRAGISKILIERMLKRIIITVHTSRPGIVIGKGGSEVDKLKE 88
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
V+K + V++ +V L A+ +S+ ++ G + +RA + M GA
Sbjct: 89 EVKK---LTKKDVQINIFEVKRPELDAMLVGQSIAQQIEGRVNFKRAIKMAIASTMRMGA 145
Query: 132 KGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVK 187
+G +++VSG+L A+ A++ +FK+G + P++ + +D A+ L G +G+KV
Sbjct: 146 QGVKIMVSGRLNGAEMARTQQFKEGRI-----PLHTFRADVDYALTEALTVYGKIGVKVW 200
Query: 188 IMLE 191
I E
Sbjct: 201 IFKE 204
>gi|406969023|gb|EKD93749.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 226
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 6/166 (3%)
Query: 25 LTRELAEDGY-SGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
R+ ++GY + +E+ RT +II +R V+G +G I + +++ F+ + S
Sbjct: 42 FVRKHFKEGYIAKIEILRDANRTTLIIHTSRPGTVIGRQGEGIEKFQEILEGMFRQQKFS 101
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR 143
+ + +++ N L A AES+ ++ ++ RRA ++ ME+GAKG ++ V G+L
Sbjct: 102 ISV--KEIKNPDLDAYIVAESITKQIARRVSYRRAVKTAIQRGMENGAKGIKIGVKGRLN 159
Query: 144 A-QRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+ A++ +G + N +D A GV+G+KV I
Sbjct: 160 GVEIARAETTSEGKIPLHTLRAN--VDYAYVPAQTTYGVIGVKVWI 203
>gi|345870980|ref|ZP_08822929.1| ribosomal protein S3 [Thiorhodococcus drewsii AZ1]
gi|343921134|gb|EGV31858.1| ribosomal protein S3 [Thiorhodococcus drewsii AZ1]
Length = 225
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 10 KFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
K+ A+ +A+L + L +ELA+ S +++ I I R V+G+K
Sbjct: 21 KWYANSKDYADLLNTDLQVRDFLRKELAKASVSRIQINRPAKNAHITIHTARPGVVIGKK 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G I +L + V P V + E++ L A AE + +L + RRA
Sbjct: 81 GEDIDKLRTKVSAMMGIP---VHISIEEIRKPELDAQLVAEGIAQQLERRIMFRRAMKRS 137
Query: 123 LRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLR 178
++ M GA+G +V V+G+L A+ A+S ++G + P++ ID
Sbjct: 138 IQNTMRLGAEGIKVNVAGRLNGAEIARSEWAREGRV-----PLHTLRADIDYGFAEAKTT 192
Query: 179 QGVLGIKVKIMLEWDQKGKQGPTTPLP 205
G+LG+KV I + + G+Q P P P
Sbjct: 193 YGILGVKVWI-FKGEVFGEQLPEEPAP 218
>gi|29653596|ref|NP_819288.1| 30S ribosomal protein S3 [Coxiella burnetii RSA 493]
gi|30581016|sp|O85388.2|RS3_COXBU RecName: Full=30S ribosomal protein S3
gi|29540858|gb|AAO89802.1| SSU ribosomal protein S3P [Coxiella burnetii RSA 493]
Length = 227
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 24/218 (11%)
Query: 11 FVADGVFFAE-LNEVLT-RELAEDGYSGVEV-RVT---PVRT-EIIIRATRTQNVLGEKG 63
+ AD FA+ LNE L R+L + G V R+ P R +III + R ++G+KG
Sbjct: 22 WYADKKDFADRLNEDLNVRQLLQKRLKGAAVSRIQIERPARNAKIIIHSARPGVIIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I L + K K P V + E+V L A AE++ +L + RRA +
Sbjct: 82 GEIEALRDEIFKVMKVP---VHITIEEVRKPELDAKLVAENIAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQ 179
+ + GA G ++ VSG+L A+ A++ +++G + P++ + ID A
Sbjct: 139 QNTLRQGALGVKISVSGRLGGAEIARTEWYREGRV-----PLHTFRADIDYATASAKTTY 193
Query: 180 GVLGIKVKIMLEWDQKGKQGPTTPLPDLVTIHPLKEEV 217
G++G+KV W KG+ P + +EEV
Sbjct: 194 GIIGVKV-----WIFKGEVHAPKPQAEEAAPQETEEEV 226
>gi|269798544|ref|YP_003312444.1| 30S ribosomal protein S3 [Veillonella parvula DSM 2008]
gi|282849870|ref|ZP_06259253.1| ribosomal protein S3 [Veillonella parvula ATCC 17745]
gi|294792800|ref|ZP_06757947.1| ribosomal protein S3 [Veillonella sp. 6_1_27]
gi|294794554|ref|ZP_06759690.1| ribosomal protein S3 [Veillonella sp. 3_1_44]
gi|417000155|ref|ZP_11940476.1| ribosomal protein S3 [Veillonella parvula ACS-068-V-Sch12]
gi|269095173|gb|ACZ25164.1| ribosomal protein S3 [Veillonella parvula DSM 2008]
gi|282580307|gb|EFB85707.1| ribosomal protein S3 [Veillonella parvula ATCC 17745]
gi|294454884|gb|EFG23257.1| ribosomal protein S3 [Veillonella sp. 3_1_44]
gi|294456699|gb|EFG25062.1| ribosomal protein S3 [Veillonella sp. 6_1_27]
gi|333976236|gb|EGL77106.1| ribosomal protein S3 [Veillonella parvula ACS-068-V-Sch12]
Length = 222
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 18/189 (9%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
K+ AD F A L+E L L G S +E+ T R ++ I + V+G G
Sbjct: 21 KWYADKDFAANLHEDVKIRNFLKETLFIAGISRIEIERTNKRIKLTIHTAKPGMVIGRGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ + + F + V++ ++ + A AE++ +L + RRA +
Sbjct: 81 AGIEDIKKAMTR---FTDKQVDVNIAEIKQADMDATLVAENIAGQLERRIGFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQ 179
M GAKG +++VSG+L A+ A+S +++G + P++ ID
Sbjct: 138 GRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSI-----PLHTLRADIDYGTAEAHTTY 192
Query: 180 GVLGIKVKI 188
G +GIKV I
Sbjct: 193 GCIGIKVWI 201
>gi|330447031|ref|ZP_08310681.1| ribosomal protein S3 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491222|dbj|GAA05178.1| ribosomal protein S3 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 229
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 18/182 (9%)
Query: 14 DGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
DG F ++ + LT+ELA+ S + + + I R V+G+KG + +L + V
Sbjct: 34 DGDF--KVRQFLTKELAKASLSRIVIERPAKSIRVTIHTARPGVVIGKKGEDVEKLRAAV 91
Query: 74 QKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
K P N E+ +++ + L A + A L +++ A++RA +R GA
Sbjct: 92 AKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKRAVQNAMRL----GA 146
Query: 132 KGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVK 187
KG +V VSG+L A+ A++ +++G + P++ ID A + GV+G+KV
Sbjct: 147 KGIKVEVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYATSSAHTQYGVIGVKVW 201
Query: 188 IM 189
I
Sbjct: 202 IF 203
>gi|260772102|ref|ZP_05881019.1| SSU ribosomal protein S3p (S3e) [Vibrio metschnikovii CIP 69.14]
gi|260612969|gb|EEX38171.1| SSU ribosomal protein S3p (S3e) [Vibrio metschnikovii CIP 69.14]
Length = 232
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 2 ATQISKKRKFVA--DGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
AT + + F DG F ++ + LT+ELA+ S + + + I R V+
Sbjct: 20 ATWFANTKDFADNLDGDF--KVRQYLTKELAKASLSRIVIERPAKSIRVTIHTARPGVVI 77
Query: 60 GEKGRRIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+KG + +L + V K P N E+ +++ + L A + A L +++ A++R
Sbjct: 78 GKKGEDVEKLRAAVAKIAGVPAQINISEVRKPELDGQ-LVADSIASQLERRVMFRRAMKR 136
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVR 173
A +R GAKG +V VSG+L A+ A+S +++G + P++ ID A
Sbjct: 137 AVQNAMRL----GAKGIKVEVSGRLGGAEIARSEWYREGRV-----PLHTLRADIDYATS 187
Query: 174 HVLLRQGVLGIKVKIM 189
GV+G+KV I
Sbjct: 188 SAHTTYGVIGVKVWIF 203
>gi|242309325|ref|ZP_04808480.1| 30S ribosomal protein S3 [Helicobacter pullorum MIT 98-5489]
gi|239523896|gb|EEQ63762.1| 30S ribosomal protein S3 [Helicobacter pullorum MIT 98-5489]
Length = 235
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ + L +EL G S + + T + + + A R ++G+KG + +L ++K
Sbjct: 38 KIRKFLKKELYYAGVSDILIERTARKVRVTVVAARPGIIIGKKGADVEKLKESLKK---I 94
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ L ++V A AES+ +L +A RRA V++ M+SGAKG +V VS
Sbjct: 95 VNKDIFLNIKEVKKPQSNAQLSAESVATQLERRVAFRRAMKKVMQGAMKSGAKGIKVKVS 154
Query: 140 GKLR-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
G+L A+ A++ + +G + + ID L G +G+KV I
Sbjct: 155 GRLAGAEMARTEWYMEGRI--PLHTLRAKIDYGFAEALTTYGNIGVKVWIF 203
>gi|148982468|ref|ZP_01816770.1| 30S ribosomal protein S3 [Vibrionales bacterium SWAT-3]
gi|417949247|ref|ZP_12592385.1| 30S ribosomal protein S3 [Vibrio splendidus ATCC 33789]
gi|145960459|gb|EDK25836.1| 30S ribosomal protein S3 [Vibrionales bacterium SWAT-3]
gi|342808641|gb|EGU43790.1| 30S ribosomal protein S3 [Vibrio splendidus ATCC 33789]
Length = 232
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 2 ATQISKKRKFVA--DGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
AT + + F DG F ++ + LT+EL + S + + + I R V+
Sbjct: 20 ATWFANTKDFADNLDGDF--KVRQFLTKELQKASLSRIVIERPAKSIRVTIHTARPGVVI 77
Query: 60 GEKGRRIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+KG + +L + V K P N E+ +++ + L A + A L +++ A++R
Sbjct: 78 GKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKR 136
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVR 173
A +R GAKG +V VSG+L A+ A+S +++G + P++ ID A
Sbjct: 137 AVQNAMRL----GAKGIKVEVSGRLGGAEIARSEWYREGRV-----PLHTLRADIDYATS 187
Query: 174 HVLLRQGVLGIKVKIM 189
+ GV+GIKV I
Sbjct: 188 SAHTQYGVIGIKVWIF 203
>gi|260770919|ref|ZP_05879848.1| SSU ribosomal protein S3p (S3e) [Vibrio furnissii CIP 102972]
gi|375129793|ref|YP_004991891.1| 30S ribosomal protein S3 [Vibrio furnissii NCTC 11218]
gi|260614156|gb|EEX39346.1| SSU ribosomal protein S3p (S3e) [Vibrio furnissii CIP 102972]
gi|315178965|gb|ADT85879.1| 30S ribosomal protein S3 [Vibrio furnissii NCTC 11218]
Length = 233
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 2 ATQISKKRKFVA--DGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
AT + + F DG F ++ + LT+EL++ S + + + I R V+
Sbjct: 20 ATWFANTKDFADNLDGDF--KVRQFLTKELSKASLSRIVIERPAKSIRVTIHTARPGVVI 77
Query: 60 GEKGRRIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+KG + +L + V K P N E+ +++ + L A + A L +++ A++R
Sbjct: 78 GKKGEDVEKLRTAVAKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKR 136
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVR 173
A +R GAKG +V VSG+L A+ A+S +++G + P++ ID A
Sbjct: 137 AVQNAMRL----GAKGIKVEVSGRLGGAEIARSEWYREGRV-----PLHTLRADIDYATS 187
Query: 174 HVLLRQGVLGIKVKIM 189
GV+G+KV I
Sbjct: 188 SAHTTYGVIGVKVWIF 203
>gi|377555752|ref|ZP_09785480.1| SSU ribosomal protein S3P [endosymbiont of Bathymodiolus sp.]
Length = 230
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + L +L S V++ +I I R V+G+KG I L S+V K
Sbjct: 38 EVRDFLFEKLKSASVSRVQIERLANNAKITIHTARPGIVIGKKGADIESLKSIVTKMMGM 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
S + E++ L + AE++ +L + RRA VL GA+G +V+VS
Sbjct: 98 ---SAHINIEEIKKPELDSRLVAENIAQQLEKRVMYRRAVKRVLGNATRLGAQGIKVMVS 154
Query: 140 GKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIM 189
G+L A+ A+S +++G + P++ + ID A + GV+GIKV I
Sbjct: 155 GRLNGAEIARSEWYREGRV-----PLHTFRADIDYAHYGANTQYGVIGIKVWIF 203
>gi|160872272|ref|ZP_02062404.1| ribosomal protein S3 [Rickettsiella grylli]
gi|159121071|gb|EDP46409.1| ribosomal protein S3 [Rickettsiella grylli]
Length = 263
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 98/197 (49%), Gaps = 18/197 (9%)
Query: 6 SKKRKFVADGVFFA-ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+KK + AD +++ +++ + L + G S +++ +++I I + V+G+KG
Sbjct: 24 AKKSREYADNLYYDLSARKLIEKALLQAGVSSIQIERAARKSKITISVAKPGVVIGKKGE 83
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
I +L ++K + P V L +V L A AE++ +L + RRA ++
Sbjct: 84 YIDQLRDQLEKIMRVP---VRLSVLEVKKPELDAKLVAENIAQQLERRVMFRRAMKRAVQ 140
Query: 125 FIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQG 180
+ GA G ++ V+G+L A+ A+S ++++G + P++ + ID A+ G
Sbjct: 141 TALRLGALGIKITVAGRLGGAEIARSERYQEGSV-----PLHTFRADIDYALAEAQTTYG 195
Query: 181 VLGIKVKIMLEWDQKGK 197
LG+KV W KG+
Sbjct: 196 KLGVKV-----WIYKGE 207
>gi|148655331|ref|YP_001275536.1| 30S ribosomal protein S3 [Roseiflexus sp. RS-1]
gi|189045329|sp|A5USI3.1|RS3_ROSS1 RecName: Full=30S ribosomal protein S3
gi|148567441|gb|ABQ89586.1| SSU ribosomal protein S3P [Roseiflexus sp. RS-1]
Length = 262
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
L +++ +EL G + +E+ + + E+ + + V+G++G ++ EL + ++KR
Sbjct: 38 LRKIIAKELENAGVARIEIERSANKVEVTVYTAKPGIVIGKRGAKVDELRAELEKRTG-- 95
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
V+L ++++ L A AES+ ++ ++ +RA ++ M GA+G ++ SG
Sbjct: 96 -KKVKLNIQEIHQPELEAQLVAESIAEQINKRVSYKRAMKQAVQRAMRLGAQGVKIKCSG 154
Query: 141 KLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIM---LEWD 193
+L A+ A+ +DG + P++ ID A H G +G+KV I + D
Sbjct: 155 RLAGAEMARVAWERDGRV-----PLHTLRADIDYAQVHAHTTYGRIGVKVWIYKGEVFPD 209
Query: 194 QKGKQGPTTPLPDLVTIHP 212
QKG+ P P + P
Sbjct: 210 QKGQ--TQLPQPAVAAARP 226
>gi|325280962|ref|YP_004253504.1| 30S ribosomal protein S3 [Odoribacter splanchnicus DSM 20712]
gi|324312771|gb|ADY33324.1| ribosomal protein S3 [Odoribacter splanchnicus DSM 20712]
Length = 244
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ + L LA+ G + + + T I I R ++G+ G+ + +L ++K
Sbjct: 37 KIRKYLNARLAKAGIAKIVIERTLKLITITINTARPGIIIGKGGQEVDKLKEELKK---I 93
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ V++ ++ L A+ ++ +L G +A RRA + M GA+G ++++S
Sbjct: 94 TDKEVQINIFEIKRPELDAVIVGNNIARQLEGRVAYRRAIKMAIASTMRMGAEGIKILIS 153
Query: 140 GKLR-AQRAKSMKFKDGYMISSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A++ FK+G P++ + ID A L G+LGIKV I
Sbjct: 154 GRLNGAEMARAEMFKEGRT-----PLHTFRADIDFAQAEALTTYGLLGIKVWI 201
>gi|34558021|ref|NP_907836.1| 30S ribosomal protein S3 [Wolinella succinogenes DSM 1740]
gi|61215661|sp|Q7M8E0.1|RS3_WOLSU RecName: Full=30S ribosomal protein S3
gi|34483739|emb|CAE10736.1| 30S RIBOSOMAL PROTEIN S3 [Wolinella succinogenes]
Length = 236
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 93/188 (49%), Gaps = 19/188 (10%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
++ K RKF+ +++A ++E++ A+ ++RVT V A R ++G+K
Sbjct: 34 SEDHKIRKFLKKELYYAGVSEIIIERTAK------KLRVTVV-------AARPGIIIGKK 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G I +L ++K + + + ++V A AE++ +L +A RRA V
Sbjct: 81 GADIEKLKEALKK---IVDKEISINIKEVKRPQANAQLAAENVTMQLERRVAFRRAMKKV 137
Query: 123 LRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGV 181
++ M++GAKG ++ VSG+L A+ A++ + +G + + ID + G+
Sbjct: 138 MQAAMKAGAKGIKIKVSGRLAGAEMARTEWYMEGRV--PLHTLRAKIDYGFAEAMTTYGI 195
Query: 182 LGIKVKIM 189
+G KV I
Sbjct: 196 IGAKVWIF 203
>gi|253827230|ref|ZP_04870115.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491]
gi|313141433|ref|ZP_07803626.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491]
gi|253510636|gb|EES89295.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491]
gi|313130464|gb|EFR48081.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491]
Length = 235
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 6/171 (3%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ + L +EL G S + + T + + + A R ++G+KG + +L + K
Sbjct: 38 KIRKFLKKELYYAGVSDILIERTARKVRVTVVAARPGIIIGKKGADVEKLKESLNK---I 94
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ L ++V A AES+ +L +A RRA V++ M+SGAKG +V VS
Sbjct: 95 VNKDIFLNIKEVKKPQSNAQLAAESVATQLERRVAFRRAMKKVMQGAMKSGAKGIKVKVS 154
Query: 140 GKLR-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
G+L A+ A++ + +G + + ID L G +G+KV I
Sbjct: 155 GRLAGAEMARTEWYMEGRI--PLHTLRAKIDYGFAEALTTYGNIGVKVWIF 203
>gi|374852498|dbj|BAL55430.1| 30S ribosomal protein S3 [uncultured beta proteobacterium]
Length = 255
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 47 EIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR 106
+I I R V+G+KG I +L + +R P ++ E+V L A AES+
Sbjct: 65 KITIHTARPGVVIGKKGEDIEKLRQEISERLGIP---AQVAIEEVRKPELDAQLVAESIA 121
Query: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVN 165
+L + RRA ++ M GAKG +V+ SG+L A+ A+S +++G + P++
Sbjct: 122 NQLEKRIQFRRAMKRAMQSAMRLGAKGIKVMTSGRLNGAEIARSEWYREGRV-----PLH 176
Query: 166 EY---IDSAVRHVLLRQGVLGIKVKIMLEWDQKG-----KQGPTTPLPD 206
ID GV+G+KV W KG Q P P+
Sbjct: 177 TLRADIDYGFAEARTTYGVIGVKV-----WIYKGDVLNRNQSPVAASPE 220
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,291,909,888
Number of Sequences: 23463169
Number of extensions: 127126939
Number of successful extensions: 298844
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 2570
Number of HSP's that attempted gapping in prelim test: 295662
Number of HSP's gapped (non-prelim): 3623
length of query: 232
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 94
effective length of database: 9,121,278,045
effective search space: 857400136230
effective search space used: 857400136230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)