Your job contains 1 sequence.
>026836
MPSTKIRLTFTSAASLSISLKAIFSRFLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEET
RQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGK
NDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEF
EARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026836
(232 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2075676 - symbol:AT3G47120 species:3702 "Arabi... 277 3.3e-24 1
MGI|MGI:1919414 - symbol:Rbmx2 "RNA binding motif protein... 126 4.9e-10 2
UNIPROTKB|G5E5I0 - symbol:RBMX2 "Uncharacterized protein"... 113 3.8e-08 2
DICTYBASE|DDB_G0288797 - symbol:fip1l1 "cleavage and poly... 137 5.1e-08 2
WB|WBGene00018926 - symbol:F56A11.6 species:6239 "Caenorh... 139 8.5e-08 1
UNIPROTKB|F1LMQ9 - symbol:Rbmx2 "RNA-binding motif protei... 106 1.5e-07 2
RGD|1562693 - symbol:Rbmx2 "RNA binding motif protein, X-... 106 1.5e-07 2
UNIPROTKB|G4NKC1 - symbol:MGG_03086 "U2 snRNP component I... 119 7.6e-07 2
ZFIN|ZDB-GENE-030131-1495 - symbol:zrsr2 "zinc finger (CC... 134 1.0e-06 1
UNIPROTKB|E1C591 - symbol:PPIG "Uncharacterized protein" ... 134 1.3e-06 1
UNIPROTKB|G3X6K3 - symbol:LOC534630 "Uncharacterized prot... 99 2.4e-06 2
ASPGD|ASPL0000074275 - symbol:AN4665 species:162425 "Emer... 99 5.4e-06 2
ZFIN|ZDB-GENE-040426-2822 - symbol:ppig "peptidyl-prolyl ... 129 5.6e-06 1
UNIPROTKB|J9P250 - symbol:RBMX2 "Uncharacterized protein"... 96 6.2e-06 2
UNIPROTKB|F1PRG0 - symbol:RBMX2 "Uncharacterized protein"... 94 9.7e-06 2
FB|FBgn0031273 - symbol:CG2839 species:7227 "Drosophila m... 127 1.3e-05 1
ZFIN|ZDB-GENE-040718-457 - symbol:snrnp27 "small nuclear ... 110 1.9e-05 1
TAIR|locus:2132358 - symbol:AT4G02720 "AT4G02720" species... 122 2.1e-05 1
ZFIN|ZDB-GENE-050626-88 - symbol:rbmx2 "RNA binding motif... 91 2.8e-05 2
UNIPROTKB|G5EHZ9 - symbol:MGCH7_ch7g1102 "Uncharacterized... 120 3.3e-05 1
FB|FBgn0036619 - symbol:Cpr72Ec "Cuticular protein 72Ec" ... 118 7.1e-05 1
UNIPROTKB|F1NHR6 - symbol:ZRSR2 "Uncharacterized protein"... 118 7.9e-05 1
TAIR|locus:2206001 - symbol:AT1G60900 species:3702 "Arabi... 119 8.3e-05 1
DICTYBASE|DDB_G0294559 - symbol:DDB_G0294559 "RNA-binding... 86 0.00011 2
WB|WBGene00013917 - symbol:ZC504.3 species:6239 "Caenorha... 118 0.00013 1
CGD|CAL0000980 - symbol:orf19.4330 species:5476 "Candida ... 118 0.00014 1
UNIPROTKB|Q5AG50 - symbol:CaO19.4330 "Putative uncharacte... 118 0.00014 1
UNIPROTKB|G4NEH6 - symbol:MGG_00102 "Cell cycle control p... 118 0.00015 1
DICTYBASE|DDB_G0282873 - symbol:DDB_G0282873 "RNA-binding... 119 0.00015 1
UNIPROTKB|B4DH15 - symbol:DDX23 "cDNA FLJ54028, highly si... 93 0.00022 1
UNIPROTKB|K7GKM6 - symbol:RPTN "Uncharacterized protein" ... 116 0.00023 1
TAIR|locus:2076121 - symbol:AT3G23900 species:3702 "Arabi... 111 0.00023 2
RGD|1309863 - symbol:Nsrp1 "nuclear speckle splicing regu... 115 0.00024 1
ZFIN|ZDB-GENE-040426-1619 - symbol:zc3h13 "zinc finger CC... 120 0.00024 1
UNIPROTKB|Q15696 - symbol:ZRSR2 "U2 small nuclear ribonuc... 114 0.00026 1
FB|FBgn0031883 - symbol:CG11266 species:7227 "Drosophila ... 115 0.00026 1
UNIPROTKB|E1C1G5 - symbol:ZC3H18 "Uncharacterized protein... 97 0.00027 2
FB|FBgn0004924 - symbol:Top1 "Topoisomerase 1" species:72... 117 0.00028 1
DICTYBASE|DDB_G0274361 - symbol:prpf38a "putative U4/U6.U... 114 0.00028 1
ZFIN|ZDB-GENE-040426-1146 - symbol:traf3ip1 "TNF receptor... 115 0.00029 1
UNIPROTKB|G4NGT8 - symbol:MGG_17707 "Uncharacterized prot... 117 0.00029 1
MGI|MGI:2144305 - symbol:Ccdc55 "coiled-coil domain conta... 114 0.00031 1
UNIPROTKB|G4MRF7 - symbol:MGG_02411 "Uncharacterized prot... 112 0.00034 1
UNIPROTKB|Q06A99 - symbol:SRSF4 "SFRS4" species:9823 "Sus... 113 0.00037 2
ZFIN|ZDB-GENE-030131-6117 - symbol:dido1 "death inducer-o... 120 0.00039 1
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 117 0.00039 2
UNIPROTKB|F1ST35 - symbol:RPTN "Uncharacterized protein" ... 113 0.00042 1
WB|WBGene00002957 - symbol:let-858 species:6239 "Caenorha... 115 0.00045 1
UNIPROTKB|Q17336 - symbol:let-858 "Pre-mRNA-splicing fact... 115 0.00045 1
UNIPROTKB|E2RSE4 - symbol:PPIG "Uncharacterized protein" ... 114 0.00046 1
UNIPROTKB|G4NEX9 - symbol:MGG_00716 "Microfibril-associat... 112 0.00046 1
TAIR|locus:2087347 - symbol:AT3G25840 species:3702 "Arabi... 115 0.00047 1
UNIPROTKB|J9PAE8 - symbol:PPIG "Uncharacterized protein" ... 114 0.00047 1
UNIPROTKB|J9P1V6 - symbol:J9P1V6 "Uncharacterized protein... 105 0.00054 1
UNIPROTKB|Q9H0G5 - symbol:NSRP1 "Nuclear speckle splicing... 112 0.00056 1
UNIPROTKB|H0YA81 - symbol:LUC7L3 "Luc7-like protein 3" sp... 105 0.00058 1
UNIPROTKB|I3LF64 - symbol:ZRSR2 "Uncharacterized protein"... 111 0.00059 1
UNIPROTKB|G4N9S1 - symbol:MGG_10681 "Peptidyl-prolyl cis-... 111 0.00064 1
UNIPROTKB|B4DJ96 - symbol:LUC7L3 "Luc7-like protein 3" sp... 109 0.00065 1
UNIPROTKB|F8VVA2 - symbol:DDX23 "Probable ATP-dependent R... 103 0.00066 1
UNIPROTKB|G4MZ88 - symbol:MGG_08192 "Uncharacterized prot... 114 0.00070 1
TAIR|locus:2165447 - symbol:U2AF35B species:3702 "Arabido... 107 0.00072 1
UNIPROTKB|J9NS11 - symbol:ZC3H18 "Uncharacterized protein... 93 0.00079 2
DICTYBASE|DDB_G0279535 - symbol:DDB_G0279535 "DUF1777 fam... 107 0.00079 1
UNIPROTKB|E2QSN7 - symbol:ZC3H18 "Uncharacterized protein... 93 0.00079 2
DICTYBASE|DDB_G0267796 - symbol:DDB_G0267796 "initiation ... 113 0.00080 1
UNIPROTKB|E1BXC5 - symbol:ZC3H13 "Uncharacterized protein... 115 0.00087 1
UNIPROTKB|Q3SX41 - symbol:LUC7L3 "Luc7-like protein 3" sp... 109 0.00088 1
UNIPROTKB|O95232 - symbol:LUC7L3 "Luc7-like protein 3" sp... 109 0.00088 1
UNIPROTKB|Q5R8W6 - symbol:LUC7L3 "Luc7-like protein 3" sp... 109 0.00088 1
MGI|MGI:1914934 - symbol:Luc7l3 "LUC7-like 3 (S. cerevisi... 109 0.00088 1
UNIPROTKB|P08621 - symbol:SNRNP70 "U1 small nuclear ribon... 109 0.00090 1
FB|FBgn0027617 - symbol:CG5808 species:7227 "Drosophila m... 111 0.00090 1
ASPGD|ASPL0000028535 - symbol:AN5535 species:162425 "Emer... 111 0.00096 1
DICTYBASE|DDB_G0268004 - symbol:snrp70 "U1 small nuclear ... 109 0.00097 1
>TAIR|locus:2075676 [details] [associations]
symbol:AT3G47120 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00642 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AL133292
EMBL:BT002472 EMBL:BT010369 IPI:IPI00540994 PIR:T45648
RefSeq:NP_190296.1 UniGene:At.35841 HSSP:Q9V535
ProteinModelPortal:Q9SD61 SMR:Q9SD61 IntAct:Q9SD61 PaxDb:Q9SD61
PRIDE:Q9SD61 EnsemblPlants:AT3G47120.1 GeneID:823865
KEGG:ath:AT3G47120 TAIR:At3g47120 eggNOG:COG0724
HOGENOM:HOG000174091 InParanoid:Q9SD61 KO:K13107 OMA:GHEEDRS
PhylomeDB:Q9SD61 ProtClustDB:CLSN2915690 Genevestigator:Q9SD61
Uniprot:Q9SD61
Length = 352
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 84/220 (38%), Positives = 106/220 (48%)
Query: 30 NNLNGAQILGRTIRVDHVAXXXXXXXXXXXXXXXXXXXXGVCRAFQRGECTRGDGCKFSH 89
+NLNGA +LGRTI+VDH GVCRAFQRGECTRGD CKFSH
Sbjct: 95 DNLNGALVLGRTIKVDHCGAYKKHEEEDEETRRQNREARGVCRAFQRGECTRGDSCKFSH 154
Query: 90 NEQRAANTGGG-PQDRSSRWGHEKF-EG------FSWG---KNDSSSRATGSGRVALEGN 138
+E+RAANTG G +DRSS+W H+K EG F G + DS + R A G
Sbjct: 155 DEKRAANTGWGHEEDRSSKWDHDKNREGRGVCRAFQRGECTRGDSCKFSHDEKRAATTGW 214
Query: 139 PNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR 198
++ DR + + + +K G R D + D E R R D RPK
Sbjct: 215 GHEEDRSSKWDQDKLNGAKKGGTSFGNRGDFKP----DVEEKSYRGRGDG-DASYGRPK- 268
Query: 199 HESESYLREDQDRRGGD------KSSTGRGDSS-SHRHRE 231
E E RED R D + +GR D++ S RH +
Sbjct: 269 -ERERVDREDMGPRSRDAYDMKEQKRSGRYDNAYSRRHND 307
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 72/174 (41%), Positives = 96/174 (55%)
Query: 69 GVCRAFQRGECTRGDGCKFSHNEQRAANTGGG-PQDRSSRWGHEKFEGF-----SWGKN- 121
GVCRAFQRGECTRGD CKFSH+E+RAA TG G +DRSS+W +K G S+G
Sbjct: 184 GVCRAFQRGECTRGDSCKFSHDEKRAATTGWGHEEDRSSKWDQDKLNGAKKGGTSFGNRG 243
Query: 122 -------DSSSRATGSGRVALEGNPNQSDR--REEK--RSI-RHDHREKPREDHGRREDK 169
+ S R G G + G P + +R RE+ RS +D +E+ R GR ++
Sbjct: 244 DFKPDVEEKSYRGRGDGDASY-GRPKERERVDREDMGPRSRDAYDMKEQKRS--GRYDNA 300
Query: 170 RSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGD 223
SRRH+D ++ RED R + KR ++ES R+ DR D+ S R D
Sbjct: 301 YSRRHNDEIDYV---REDKGSRAQDWEKR-KAESR-RDRNDREEKDRDSLRRED 349
>MGI|MGI:1919414 [details] [associations]
symbol:Rbmx2 "RNA binding motif protein, X-linked 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1919414 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 eggNOG:COG0724 HOGENOM:HOG000174091 KO:K13107
EMBL:AL672042 GeneTree:ENSGT00600000084414 CTD:51634
HOVERGEN:HBG056427 OrthoDB:EOG4FJ8B4 EMBL:AK076115 EMBL:AK168018
EMBL:BC026976 IPI:IPI00261255 RefSeq:NP_775552.1 UniGene:Mm.32561
ProteinModelPortal:Q8R0F5 SMR:Q8R0F5 STRING:Q8R0F5
PhosphoSite:Q8R0F5 PRIDE:Q8R0F5 Ensembl:ENSMUST00000033433
GeneID:209003 KEGG:mmu:209003 UCSC:uc009tct.1 InParanoid:A2AF74
NextBio:372506 Bgee:Q8R0F5 CleanEx:MM_RBMX2 Genevestigator:Q8R0F5
GermOnline:ENSMUSG00000031107 Uniprot:Q8R0F5
Length = 326
Score = 126 (49.4 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 111 EKFEGFSWGKNDSSSR-ATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDK 169
EK EG + + S SR AT + + S + E R+ + +HRE ++ H D
Sbjct: 173 EKTEGQAQAEQPSCSRSATVKEKKDERASRKHSSKTSE-RAQKSEHRES-KKSHSGSPDG 230
Query: 170 RSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLRE-DQDRRGGDKSSTGRGDSSSHR 228
RS H+ + E ++R++ + + K R E+E RE ++ R G S RG S
Sbjct: 231 RSSYHARAEDPECKARKEKPKHEHKSASRREAEEKSRERERGRSSGTHSGRHRGHSDGRS 290
Query: 229 HRER 232
HR R
Sbjct: 291 HRSR 294
Score = 91 (37.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 31/146 (21%), Positives = 54/146 (36%)
Query: 75 QRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFE----GFSWGKNDSSSRATGS 130
++ C+R K +E+ + +R+ + H + + G G++ +RA
Sbjct: 182 EQPSCSRSATVKEKKDERASRKHSSKTSERAQKSEHRESKKSHSGSPDGRSSYHARAEDP 241
Query: 131 GRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYR 190
A + P + +R RE+ R R R HSD +RSR
Sbjct: 242 ECKARKEKPKHEHKSASRREAEEKSRERERGRSSGTHSGRHRGHSDGRSHRSRSRS---- 297
Query: 191 RDEKRPKRHESESYLREDQDRRGGDK 216
R + RH+ + RE G D+
Sbjct: 298 RSPDKSHRHKKYRHSRERDSYHGSDR 323
Score = 87 (35.7 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 29/118 (24%), Positives = 47/118 (39%)
Query: 120 KNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPRED-HGRREDK--RSRRHSD 176
K RA+ +S+ RE K+S H R H R ED ++R+
Sbjct: 193 KEKKDERASRKHSSKTSERAQKSEHRESKKS--HSGSPDGRSSYHARAEDPECKARKEKP 250
Query: 177 NNEFEARSREDHYRRDEKRPKRHESESYL---REDQDRRGGDKSSTGRGDSSSHRHRE 231
+E ++ SR + + +R + S ++ R D R S R SHRH++
Sbjct: 251 KHEHKSASRREAEEKSRERERGRSSGTHSGRHRGHSDGRSHRSRSRSRSPDKSHRHKK 308
Score = 69 (29.3 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 30 NNLNGAQILGRTIRVDHVA 48
+N NG +I GRTIRVDHV+
Sbjct: 95 DNFNGIKIKGRTIRVDHVS 113
>UNIPROTKB|G5E5I0 [details] [associations]
symbol:RBMX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00600000084414 OMA:HRHKRAR EMBL:DAAA02067479
Ensembl:ENSBTAT00000019649 Uniprot:G5E5I0
Length = 338
Score = 113 (44.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 30/101 (29%), Positives = 45/101 (44%)
Query: 132 RVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSRE-DHYR 190
R + +P+ + R RS D +PR++ + E K S R + E R RE D R
Sbjct: 223 REVRKSHPSSPEVRMTCRSGTEDQEREPRKEKSKHEHKSSSRREER---EDRHRERDRGR 279
Query: 191 RDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 231
+ +RH+ S R D+ G S R SHRH++
Sbjct: 280 SSDIHSRRHDRRSEGRHDRGSEGRSHRSRSRSRDKSHRHKK 320
Score = 93 (37.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 26/78 (33%), Positives = 35/78 (44%)
Query: 140 NQSDRREEKRSIRHDHREKPRED--HGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPK 197
++S R E+R RH R++ R H RR D+RS D E RS H R R K
Sbjct: 259 HKSSSRREEREDRHRERDRGRSSDIHSRRHDRRSEGRHDRGS-EGRS---HRSRSRSRDK 314
Query: 198 RHESESYLREDQDRRGGD 215
H + R +DR +
Sbjct: 315 SHRHKKS-RHSRDRESSN 331
Score = 79 (32.9 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 25/94 (26%), Positives = 39/94 (41%)
Query: 141 QSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARS-REDHYRRDEKRPKRH 199
+ D +K S +H + + RE ++S S RS ED R K +H
Sbjct: 198 KDDPGSKKHSGKHSETGEKGQKSESREVRKSHPSSPEVRMTCRSGTEDQEREPRKEKSKH 257
Query: 200 ESESYLR-EDQDRRGGDKSSTGRGDSSSHRHRER 232
E +S R E+++ R ++ D S RH R
Sbjct: 258 EHKSSSRREEREDRHRERDRGRSSDIHSRRHDRR 291
Score = 69 (29.3 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 30 NNLNGAQILGRTIRVDHVA 48
+N NG +I GRTIRVDHV+
Sbjct: 95 DNFNGIKIKGRTIRVDHVS 113
>DICTYBASE|DDB_G0288797 [details] [associations]
symbol:fip1l1 "cleavage and polyadenylation
specificity factor FIP1" species:44689 "Dictyostelium discoideum"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0006379 "mRNA cleavage"
evidence=ISS] [GO:0006378 "mRNA polyadenylation" evidence=ISS]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=ISS] dictyBase:DDB_G0288797 GO:GO:0006378
GenomeReviews:CM000154_GR EMBL:AAFI02000125 GO:GO:0005847
GO:GO:0006379 eggNOG:COG5213 InterPro:IPR007854 Pfam:PF05182
RefSeq:XP_636526.1 EnsemblProtists:DDB0233703 GeneID:8626811
KEGG:ddi:DDB_G0288797 InParanoid:Q54IF1 OMA:AYCERQN Uniprot:Q54IF1
Length = 560
Score = 137 (53.3 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 40/121 (33%), Positives = 57/121 (47%)
Query: 112 KFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRS 171
++E S N+ S GS R E + + S R + R R RE+ R+D R E +RS
Sbjct: 356 QYEDDSNNNNNGSGSGGGSDRRRNESS-SSSSRGDSDRGERE--RERDRDDRDRSERERS 412
Query: 172 RRHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 231
R D +E E R + R D R +R S+ R D+D+ SS+ SSS R +
Sbjct: 413 DR--DRSERERSDRSERERSDRDRSERERSDRSERSDRDKTSSSSSSSNNNSSSSTRGSD 470
Query: 232 R 232
R
Sbjct: 471 R 471
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 48/159 (30%), Positives = 64/159 (40%)
Query: 81 RGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGS-GRVALEGNP 139
RG G +S Q ++ S G ++ S + SSSR G E +
Sbjct: 345 RGSGRTYSTTNQYEDDSNNNNNGSGSGGGSDRRRNES---SSSSSRGDSDRGERERERDR 401
Query: 140 NQSDRREEKRSIRHDHREKPREDHGRRE----DKRSRRHSDNNEFEARSREDHYRRDEKR 195
+ DR E +RS R D E+ R D RE D+ R SD +E RS D
Sbjct: 402 DDRDRSERERSDR-DRSERERSDRSERERSDRDRSERERSDRSE---RSDRDKTSSSSSS 457
Query: 196 PKRHESESYLREDQ-DR-RGGDKSSTGRGDS-SSHRHRE 231
+ S S D+ DR RGGD+ T S S R R+
Sbjct: 458 SNNNSSSSTRGSDRYDRERGGDRDRTSESSSRGSDRDRD 496
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 47/158 (29%), Positives = 65/158 (41%)
Query: 88 SHNEQRAANTGGGPQDR-------SSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPN 140
S+N + +GGG R SSR ++ E D R+
Sbjct: 361 SNNNNNGSGSGGGSDRRRNESSSSSSRGDSDRGERERERDRDDRDRSERERSDRDRSERE 420
Query: 141 QSDRREEKRSIRHDHREKPREDHGRREDK---RSRRHSDNNEFEARSR-EDHYRRDEKRP 196
+SDR E +RS R D E+ R D R D+ S S NN + +R D Y R+
Sbjct: 421 RSDRSERERSDR-DRSERERSDRSERSDRDKTSSSSSSSNNNSSSSTRGSDRYDRERGGD 479
Query: 197 KRHESESYLR-EDQDRRG-GDKSSTGRGDSSSHRHRER 232
+ SES R D+DR +SS+ G SSS +R
Sbjct: 480 RDRTSESSSRGSDRDRDDYKSRSSSNTGGSSSSLRSDR 517
Score = 39 (18.8 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 80 TRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEK 112
T G G K+ +Q GGG +S ++K
Sbjct: 116 TPGSGGKYMLTKQTPTGGGGGGSGFNSAKSNQK 148
>WB|WBGene00018926 [details] [associations]
symbol:F56A11.6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
GO:GO:0009792 EMBL:FO080624 GeneTree:ENSGT00700000104144
RefSeq:NP_499950.3 EnsemblMetazoa:F56A11.6 GeneID:176884
KEGG:cel:CELE_F56A11.6 UCSC:F56A11.6 CTD:176884 WormBase:F56A11.6
eggNOG:NOG250747 InParanoid:O44519 OMA:SHHEKER NextBio:894440
Uniprot:O44519
Length = 419
Score = 139 (54.0 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 46/151 (30%), Positives = 63/151 (41%)
Query: 88 SHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKND---SSSRATGSGRVALEGNPNQSDR 144
S ++ + GG + RS R H+K ++D S SR R ++ DR
Sbjct: 248 SRQDRERDRSRGGEKSRSPRKSHQKSVDRDKTRSDKDRSRSRKDREDRDRERSRKDREDR 307
Query: 145 -REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESES 203
RE R R D K RED R ++ R + E RSR+D RD R + +
Sbjct: 308 DRERSRKEREDRSRKDREDRERERSRKEREDRSRKDRE-RSRQDREDRDRDRDRDRSRKD 366
Query: 204 YLREDQD--RRGGDKSSTGRGDSSSHRHRER 232
R+D+ RR D S R D S RER
Sbjct: 367 --RDDKSCSRRSRDDRSEERKDRKSRDDRER 395
Score = 121 (47.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 42/138 (30%), Positives = 61/138 (44%)
Query: 99 GGPQDRSSRWGHE---KFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDH 155
G P D R E + E K+ S R R + ++S E+ RS R H
Sbjct: 211 GPPSDDDRRRDEEDRRRTEDVDRSKDRSLKRREERSRSRQDRERDRSRGGEKSRSPRKSH 270
Query: 156 REKPREDHGRREDKRSRRHSDNNEFEA-RSREDHYRRDEKRPKRHESESYLREDQDRRGG 214
++ D R + RSR D + + RSR+D RD +R R E E R+D++ R
Sbjct: 271 QKSVDRDKTRSDKDRSRSRKDREDRDRERSRKDREDRDRER-SRKEREDRSRKDREDRER 329
Query: 215 DKSSTGRGDSSSHRHRER 232
++S R D S + RER
Sbjct: 330 ERSRKEREDRS-RKDRER 346
>UNIPROTKB|F1LMQ9 [details] [associations]
symbol:Rbmx2 "RNA-binding motif protein, X-linked 2"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 RGD:1562693 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00600000084414
OMA:HRHKRAR IPI:IPI00361641 Ensembl:ENSRNOT00000048922
Uniprot:F1LMQ9
Length = 327
Score = 106 (42.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 37/141 (26%), Positives = 56/141 (39%)
Query: 79 CTRGDGCKFSHNEQRAANTGGGPQDRSSRWG-HEKFEGFSWGKNDSSSRATGSGRVALEG 137
C+R K + +EQ A P +R+ + E+ + S G D + G
Sbjct: 186 CSRSKTVKET-DEQSAKKHSSKPSERAQKSECRERKKSHS-GSPDGRTSCRGRAEEPEWE 243
Query: 138 NPNQSDRREEKRSIRHDHREKPRE-DHGRREDKRSRRHSDNNEFEA-RSREDHYRRDEKR 195
+ + E K S R + EK R+ D GR S RH ++E + RSR R R
Sbjct: 244 AKKEKHKHEHKPSSRREGEEKSRDKDRGRSSGTHSSRHHGHSEGRSHRSRSRSRSRSPDR 303
Query: 196 PKRHESESYLREDQDRRGGDK 216
RH+ Y E + D+
Sbjct: 304 SHRHKKHRYSHERESFHASDR 324
Score = 95 (38.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 136 EGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRS-RRHSDNNEFEARSREDHYRRDEK 194
E + + + +R+ + + RE+ + G + + S R ++ E+EA+ +E H + + K
Sbjct: 197 EQSAKKHSSKPSERAQKSECRERKKSHSGSPDGRTSCRGRAEEPEWEAK-KEKH-KHEHK 254
Query: 195 RPKRHESESYLRE-DQDRRGGDKSSTGRGDSSSHRHRER 232
R E E R+ D+ R G SS G S HR R
Sbjct: 255 PSSRREGEEKSRDKDRGRSSGTHSSRHHGHSEGRSHRSR 293
Score = 72 (30.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 30 NNLNGAQILGRTIRVDHVA 48
+N NG +I GRTIRVDHVA
Sbjct: 94 DNFNGIKIKGRTIRVDHVA 112
>RGD|1562693 [details] [associations]
symbol:Rbmx2 "RNA binding motif protein, X-linked 2"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
RGD:1562693 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
eggNOG:COG0724 HOGENOM:HOG000174091 KO:K13107 CTD:51634
HOVERGEN:HBG056427 OrthoDB:EOG4FJ8B4 EMBL:BC158684 IPI:IPI00361641
RefSeq:NP_001107258.2 UniGene:Rn.67383 ProteinModelPortal:B0BN49
STRING:B0BN49 GeneID:367930 KEGG:rno:367930 UCSC:RGD:1562693
NextBio:691882 Genevestigator:B0BN49 Uniprot:B0BN49
Length = 328
Score = 106 (42.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 37/141 (26%), Positives = 56/141 (39%)
Query: 79 CTRGDGCKFSHNEQRAANTGGGPQDRSSRWG-HEKFEGFSWGKNDSSSRATGSGRVALEG 137
C+R K + +EQ A P +R+ + E+ + S G D + G
Sbjct: 187 CSRSKTVKET-DEQSAKKHSSKPSERAQKSECRERKKSHS-GSPDGRTSCRGRAEEPEWE 244
Query: 138 NPNQSDRREEKRSIRHDHREKPRE-DHGRREDKRSRRHSDNNEFEA-RSREDHYRRDEKR 195
+ + E K S R + EK R+ D GR S RH ++E + RSR R R
Sbjct: 245 AKKEKHKHEHKPSSRREGEEKSRDKDRGRSSGTHSSRHHGHSEGRSHRSRSRSRSRSPDR 304
Query: 196 PKRHESESYLREDQDRRGGDK 216
RH+ Y E + D+
Sbjct: 305 SHRHKKHRYSHERESFHASDR 325
Score = 95 (38.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 136 EGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRS-RRHSDNNEFEARSREDHYRRDEK 194
E + + + +R+ + + RE+ + G + + S R ++ E+EA+ +E H + + K
Sbjct: 198 EQSAKKHSSKPSERAQKSECRERKKSHSGSPDGRTSCRGRAEEPEWEAK-KEKH-KHEHK 255
Query: 195 RPKRHESESYLRE-DQDRRGGDKSSTGRGDSSSHRHRER 232
R E E R+ D+ R G SS G S HR R
Sbjct: 256 PSSRREGEEKSRDKDRGRSSGTHSSRHHGHSEGRSHRSR 294
Score = 72 (30.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 30 NNLNGAQILGRTIRVDHVA 48
+N NG +I GRTIRVDHVA
Sbjct: 95 DNFNGIKIKGRTIRVDHVA 113
>UNIPROTKB|G4NKC1 [details] [associations]
symbol:MGG_03086 "U2 snRNP component IST3" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:CM001237 KO:K13107 RefSeq:XP_003720587.1
ProteinModelPortal:G4NKC1 EnsemblFungi:MGG_03086T0 GeneID:2682639
KEGG:mgr:MGG_03086 Uniprot:G4NKC1
Length = 330
Score = 119 (46.9 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 31/90 (34%), Positives = 45/90 (50%)
Query: 145 REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARS-REDHYRRDEKRPK-RHESE 202
RE+K+S R ++ R + SR+H + ++ EA S R+ RRDE R + R +
Sbjct: 191 REQKKSSRRKDKDGSRSSRHHHHHRTSRKHREESDDEAGSDRKRRKRRDESRSRERRRRD 250
Query: 203 SYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
Y +D+ R D S R DS R RER
Sbjct: 251 DYKDKDKHR---DSDSRRRDDSKDRRRRER 277
Score = 96 (38.9 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 36/131 (27%), Positives = 51/131 (38%)
Query: 104 RSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDH 163
RSSR H S + S GS R + RR+E RS R R +D
Sbjct: 206 RSSR--HHHHHRTSRKHREESDDEAGSDR-------KRRKRRDESRS-RERRRRDDYKDK 255
Query: 164 GRREDKRSRRHSDNNEFEARSRED--HYRRDEKRPKRHESESYLREDQDRRGGDKSSTGR 221
+ D SRR D+ + R R+D H+R ++ + R D++R S R
Sbjct: 256 DKHRDSDSRRRDDSKDRRRRERDDDGHHRSKDRGRENSRDRDRDRHDRERHRRRHDSRER 315
Query: 222 GDSSSHRHRER 232
+ R R R
Sbjct: 316 HERRKERPRSR 326
Score = 48 (22.0 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 30 NNLNGAQILGRTIRVDH 46
+NL GA I R +RVDH
Sbjct: 92 DNLGGAVIKDRMMRVDH 108
>ZFIN|ZDB-GENE-030131-1495 [details] [associations]
symbol:zrsr2 "zinc finger (CCCH type), RNA-binding
motif and serine/arginine rich 2" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR000571
InterPro:IPR009145 InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
ZFIN:ZDB-GENE-030131-1495 GO:GO:0005634 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 PANTHER:PTHR12620
GeneTree:ENSGT00530000063193 CTD:8233 EMBL:CR848805 IPI:IPI00899441
RefSeq:XP_001920562.1 UniGene:Dr.116918 UniGene:Dr.77318
Ensembl:ENSDART00000081319 GeneID:100005490 KEGG:dre:100005490
NextBio:20786710 Uniprot:E7F2A1
Length = 635
Score = 134 (52.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 48/163 (29%), Positives = 72/163 (44%)
Query: 70 VCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATG 129
+C F R +C +G C F H + N DR ++ GFS S R
Sbjct: 324 ICGLFDRRKCPKGKHCNFLHVFRNPDNEFW-EADRDLHMSPDRGGGFS--ARHMSGR--- 377
Query: 130 SGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHY 189
G + GN S+R + +R+ R H + GRR R RR S + E +RSRE
Sbjct: 378 DGMWSQRGN--SSERFQRRRTDRRSHSRERYSYRGRRSRSRERR-SRSRERRSRSRERRS 434
Query: 190 RRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
R E++ + E +S R + R+ ++S R S+S R + R
Sbjct: 435 RSRERQNRNRERQSRSRSREKRKS--ENSIRR--STSQREQSR 473
>UNIPROTKB|E1C591 [details] [associations]
symbol:PPIG "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072 GO:GO:0005634
GO:GO:0005737 GO:GO:0006457 GO:GO:0003755 SUPFAM:SSF50891
GO:GO:0000413 GeneTree:ENSGT00550000074595 OMA:NKKFDHE
EMBL:AADN02020271 IPI:IPI00602148 Ensembl:ENSGALT00000015996
Uniprot:E1C591
Length = 747
Score = 134 (52.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 49/160 (30%), Positives = 72/160 (45%)
Query: 80 TRGDGCKFSHNEQRAANTGGGPQDRSSRWG--HEKFEGFSW------GKNDSSSRATGSG 131
+RG + S +++R+ G +R R EK + S GK+ SSSR
Sbjct: 502 SRGRDKERSRSKERSRRAGSRSNERDHRKSKDREKHKSRSREREHARGKHSSSSRTRERS 561
Query: 132 RVALEGNPNQSDRREEKRSIRHDH-REKPREDHGRREDKRSRRHSDNNEFEARSREDHYR 190
+ G +S R+ RS ++ R + RE RR R RR + + R RE+ R
Sbjct: 562 KSRDRGRRGRSRSRDRDRSRSKEYSRNRDRESRRRRSRSRERRGTPDRY---RGRENRRR 618
Query: 191 RDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHR 230
R+ + +R ES+S RE R +SS R DS S R R
Sbjct: 619 RNSRSSEREESQSRNRERYSNRES-RSSYKRNDSESQRKR 657
Score = 114 (45.2 bits), Expect = 0.00047, P = 0.00047
Identities = 38/144 (26%), Positives = 64/144 (44%)
Query: 89 HNEQRAANTGGGPQDRSSRWGHEKFEGF-SWGKNDSSSRATGSGRVALEGNPNQSDRREE 147
H+E+R + + ++R EK + + S G++ SR+ R A N+ D R+
Sbjct: 477 HDEKRRSRS----KERDREKDREKEKHYDSRGRDKERSRSKERSRRA-GSRSNERDHRKS 531
Query: 148 KRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLRE 207
K +H R + RE H R + S R + ++ R R R ++ R + S R+
Sbjct: 532 KDREKHKSRSRERE-HARGKHSSSSRTRERSKSRDRGRRGRSRSRDRDRSRSKEYSRNRD 590
Query: 208 DQDRRGGDKSSTGRGDSSSHRHRE 231
+ RR +S RG +R RE
Sbjct: 591 RESRRRRSRSRERRGTPDRYRGRE 614
>UNIPROTKB|G3X6K3 [details] [associations]
symbol:LOC534630 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K13107
GeneTree:ENSGT00600000084414 OMA:VFSQNRY EMBL:DAAA02072184
RefSeq:NP_001193477.1 UniGene:Bt.88830 Ensembl:ENSBTAT00000008205
GeneID:534630 KEGG:bta:534630 NextBio:20876482 Uniprot:G3X6K3
Length = 330
Score = 99 (39.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 27/103 (26%), Positives = 44/103 (42%)
Query: 132 RVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRR 191
R+ G ++ K +H+H+ R + RED RH + + RS + H RR
Sbjct: 236 RMTCHGGTEDREKEPRKEKSKHEHKSSSRREE--RED----RHRERDR--GRSSDIHSRR 287
Query: 192 DEKRP--KRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
++R + H S S R+ R + S R S+ HR +
Sbjct: 288 HDRRSEGRTHRSRSRSRDKSHRHKRSRHSRDRESSNPREHRHQ 330
Score = 99 (39.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 35/119 (29%), Positives = 52/119 (43%)
Query: 120 KNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPRED---HGRRED--KRSRRH 174
K+D S+ SG+ + + Q + E R +R H P HG ED K R+
Sbjct: 198 KDDPGSK-NHSGKHSEKAEKGQ---KSESREVRKSHPSSPEVRMTCHGGTEDREKEPRKE 253
Query: 175 SDNNEFEARSR-EDHYRRDEKRPKRHESESYLREDQDRR--GGDKSSTGRGDSSSHRHR 230
+E ++ SR E+ R +R + S+ + R DRR G S R SHRH+
Sbjct: 254 KSKHEHKSSSRREEREDRHRERDRGRSSDIHSRR-HDRRSEGRTHRSRSRSRDKSHRHK 311
Score = 69 (29.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 30 NNLNGAQILGRTIRVDHVA 48
+N NG +I GRTIRVDHV+
Sbjct: 95 DNFNGIKIKGRTIRVDHVS 113
>ASPGD|ASPL0000074275 [details] [associations]
symbol:AN4665 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:BN001303 EMBL:AACD01000080 eggNOG:COG0724
HOGENOM:HOG000174091 KO:K13107 OrthoDB:EOG441TN4 RefSeq:XP_662269.1
ProteinModelPortal:Q5B465 STRING:Q5B465
EnsemblFungi:CADANIAT00005768 GeneID:2872460 KEGG:ani:AN4665.2
OMA:VFSQNRY Uniprot:Q5B465
Length = 279
Score = 99 (39.9 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 27/77 (35%), Positives = 35/77 (45%)
Query: 136 EGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSR-RHSDNNEFEARSREDHYRRDEK 194
E +S RR E R + H R D RSR R + ++ RSR D RD K
Sbjct: 200 EARKERSSRRRESSRERPSRHSRHHHRHRRHNDDRSRSRERSSRDYRERSRRDRSYRD-K 258
Query: 195 RPKRHESESYLREDQDR 211
P+R S + R D+DR
Sbjct: 259 SPERSRSPAP-RHDRDR 274
Score = 63 (27.2 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 30 NNLNGAQILGRTIRVDH 46
+NL GA +LGR +RVDH
Sbjct: 92 DNLGGATVLGRVLRVDH 108
>ZFIN|ZDB-GENE-040426-2822 [details] [associations]
symbol:ppig "peptidyl-prolyl isomerase G
(cyclophilin G)" species:7955 "Danio rerio" [GO:0006457 "protein
folding" evidence=IEA] [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072
ZFIN:ZDB-GENE-040426-2822 GO:GO:0006457 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 KO:K09566 CTD:9360 HOVERGEN:HBG048162
HOGENOM:HOG000115659 HSSP:Q27450 EMBL:BC044189 IPI:IPI00493837
RefSeq:NP_998629.1 UniGene:Dr.18174 ProteinModelPortal:Q7ZYY1
SMR:Q7ZYY1 PRIDE:Q7ZYY1 GeneID:406773 KEGG:dre:406773
InParanoid:Q7ZYY1 NextBio:20818287 ArrayExpress:Q7ZYY1 Bgee:Q7ZYY1
Uniprot:Q7ZYY1
Length = 687
Score = 129 (50.5 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 35/109 (32%), Positives = 49/109 (44%)
Query: 125 SRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHS-DNNEFEAR 183
SR+ G G+ + + R R + HR + RE R D RR S DN E R
Sbjct: 550 SRSRGRGQRGQSRDRGRDRRHSSSRERKTSHRSRSRE-RARGRDAEDRRKSADNKSRETR 608
Query: 184 SREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
R+ R K + S RED+ +R DKS TG DS + + ++R
Sbjct: 609 GRD----RSSKERSSQKQRSREREDRQKRRKDKSDTGSSDSDNDKRKKR 653
>UNIPROTKB|J9P250 [details] [associations]
symbol:RBMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00600000084414 OMA:HRHKRAR EMBL:AAEX03026906
ProteinModelPortal:J9P250 Ensembl:ENSCAFT00000043973 Uniprot:J9P250
Length = 341
Score = 96 (38.9 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 28/88 (31%), Positives = 34/88 (38%)
Query: 145 REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESY 204
R E R R +EKPR H RR R + N R RE RD R + S+ +
Sbjct: 239 RAEDRE-REPRKEKPR--HERRSSSRREEREEKNRERERQRERERDRDRDRARGRSSDRH 295
Query: 205 LREDQDRRGGDKSSTGRGDSSSHRHRER 232
R G S GR S HR +
Sbjct: 296 SSRHNGRSEGH-SRRGRSRSRERSHRRK 322
Score = 95 (38.5 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 30/105 (28%), Positives = 43/105 (40%)
Query: 138 NPNQSDRREEKRSIRHDHREKPRED---HGRREDKRSRRHSDNNEFEARSREDHYRRDEK 194
NP + ++ E R +R H P R ED+ + E RS R+EK
Sbjct: 210 NPERG-QKSEPREVRKHHHSSPEVKTTCRSRAEDREREPRKEKPRHERRSSSRREEREEK 268
Query: 195 RPKRHESESYLRE-DQDR---RGGDKSST---GRGDSSSHRHRER 232
+R R+ D+DR R D+ S+ GR + S R R R
Sbjct: 269 NRERERQRERERDRDRDRARGRSSDRHSSRHNGRSEGHSRRGRSR 313
Score = 92 (37.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 33/100 (33%), Positives = 42/100 (42%)
Query: 136 EGNPNQSDRREEKRSI--RHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDE 193
E P + R E+RS R + EK RE +RE +R R D + RS + H R
Sbjct: 244 EREPRKEKPRHERRSSSRREEREEKNRERERQRERERDR---DRDRARGRSSDRHSSRHN 300
Query: 194 KRPKRHE--SESYLREDQDRRGGDKSSTGRGDS--SSHRH 229
R + H S RE RR + S R S S RH
Sbjct: 301 GRSEGHSRRGRSRSRERSHRRKRARHSRDRDSSNPSDRRH 340
Score = 88 (36.0 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 29/89 (32%), Positives = 39/89 (43%)
Query: 140 NQSDRREEKRSIRHDHREKPRE-DHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR 198
++ + REEK R RE+ R+ D R + S RHS + RS E H RR R R
Sbjct: 260 SRREEREEKNRERERQRERERDRDRDRARGRSSDRHSSRHN--GRS-EGHSRRGRSR-SR 315
Query: 199 HESESYLREDQDRRGGDKSSTGRGDSSSH 227
S R + R D+ S+ D H
Sbjct: 316 ERSH---RRKRARHSRDRDSSNPSDRRHH 341
Score = 69 (29.3 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 30 NNLNGAQILGRTIRVDHVA 48
+N NG +I GRTIRVDHV+
Sbjct: 95 DNFNGIKIKGRTIRVDHVS 113
>UNIPROTKB|F1PRG0 [details] [associations]
symbol:RBMX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00600000084414 EMBL:AAEX03026906
Ensembl:ENSCAFT00000029787 Uniprot:F1PRG0
Length = 326
Score = 94 (38.1 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 27/82 (32%), Positives = 38/82 (46%)
Query: 136 EGNPNQSDRREEKRSI--RHDHREKPRE-DHGRREDKRSRRHSDNNEFEARSREDHYR-R 191
E P + R E+RS R + EK RE + GR D+ S RH+ +E +R R R
Sbjct: 243 EREPRKEKPRHERRSSSRREEREEKNRERERGRSSDRHSSRHNGRSEGHSRRGRSRSRER 302
Query: 192 DEKRPK-RHESESYLREDQDRR 212
+R + RH + DRR
Sbjct: 303 SHRRKRARHSRDRDSSNPSDRR 324
Score = 88 (36.0 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 25/98 (25%), Positives = 35/98 (35%)
Query: 138 NPNQSDRREEKRSIRHDHREKPRED---HGRREDKRSRRHSDNNEFEARSREDHYRRDEK 194
NP + ++ E R +R H P R ED+ + E RS R+EK
Sbjct: 209 NPERG-QKSEPREVRKHHHSSPEVKTTCRSRAEDREREPRKEKPRHERRSSSRREEREEK 267
Query: 195 RPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
+R S R G + + RG S S R
Sbjct: 268 NRERERGRSSDRHSSRHNGRSEGHSRRGRSRSRERSHR 305
Score = 87 (35.7 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 31/90 (34%), Positives = 37/90 (41%)
Query: 145 REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFE-ARSREDHYRRDEKRPKRHE--S 201
R E R R +EKPR + R +R R N E E RS + H R R + H
Sbjct: 238 RAEDRE-REPRKEKPRHER-RSSSRREEREEKNRERERGRSSDRHSSRHNGRSEGHSRRG 295
Query: 202 ESYLREDQDRRGGDKSSTGRGDS--SSHRH 229
S RE RR + S R S S RH
Sbjct: 296 RSRSRERSHRRKRARHSRDRDSSNPSDRRH 325
Score = 79 (32.9 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 26/85 (30%), Positives = 36/85 (42%)
Query: 149 RSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLRED 208
RS D +PR++ R E + S R + E + R RE R ++ RH S E
Sbjct: 236 RSRAEDREREPRKEKPRHERRSSSRREEREE-KNRERE-RGRSSDRHSSRHNGRS---EG 290
Query: 209 QDRRGGDKSSTGRGDSSSHRH-RER 232
RRG +S RH R+R
Sbjct: 291 HSRRGRSRSRERSHRRKRARHSRDR 315
Score = 69 (29.3 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 13/19 (68%), Positives = 16/19 (84%)
Query: 30 NNLNGAQILGRTIRVDHVA 48
+N NG +I GRTIRVDHV+
Sbjct: 94 DNFNGIKIKGRTIRVDHVS 112
>FB|FBgn0031273 [details] [associations]
symbol:CG2839 species:7227 "Drosophila melanogaster"
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR001304
Pfam:PF00059 PROSITE:PS50041 SMART:SM00034 EMBL:AE014134
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 HSSP:P22897
GeneTree:ENSGT00700000104356 RefSeq:NP_608540.1
ProteinModelPortal:Q9VPS3 SMR:Q9VPS3 EnsemblMetazoa:FBtr0077999
GeneID:33244 KEGG:dme:Dmel_CG2839 UCSC:CG2839-RA
FlyBase:FBgn0031273 eggNOG:NOG243297 OMA:RIMEKER OrthoDB:EOG4DBRWH
PhylomeDB:Q9VPS3 GenomeRNAi:33244 NextBio:782628
ArrayExpress:Q9VPS3 Uniprot:Q9VPS3
Length = 826
Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 32/106 (30%), Positives = 49/106 (46%)
Query: 126 RATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSR 185
R G+ E + RREE++ + REK R D RR ++ RR + E R R
Sbjct: 522 RRREEGKRKEEERREKERRREEEKRKEEERREKERRDEERRREEERRREEERRREEERRR 581
Query: 186 EDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 231
E+ RR+E+R + E + RE++ RR ++ R RE
Sbjct: 582 EEERRREEERRREEERK---REEERRREEERRREEERRREEERRRE 624
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 136 EGNPNQSDRREEKRSI--RHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDE 193
E +++R+EE+R R E+ RE+ RRE+KR R + + E R E+ R++E
Sbjct: 438 EERREEAERKEEERKAEERRKKEERRREEKRRREEKRRREEEERRKEEERREEEEKRKEE 497
Query: 194 KRPKRHES--ESYLREDQDRRGGDKS-STGRGDSSSHRHRER 232
+R K E E R++++RR ++ G+ R +ER
Sbjct: 498 ERRKDEERRREEEKRKEEERREKERRREEGKRKEEERREKER 539
Score = 121 (47.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 34/99 (34%), Positives = 50/99 (50%)
Query: 136 EGNPNQSDRREEKRSIRHDHR---EKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD 192
E + +RR+E+R + R E+ RE+ RRE++R RR + E R RE+ RR+
Sbjct: 548 EEERREKERRDEERRREEERRREEERRREEERRREEER-RREEERRREEERKREEERRRE 606
Query: 193 EKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 231
E+R R E E RE++ RR +K R RE
Sbjct: 607 EER--RREEERR-REEERRREEEKRKEEERRKEEERKRE 642
Score = 116 (45.9 bits), Expect = 0.00030, P = 0.00030
Identities = 33/99 (33%), Positives = 46/99 (46%)
Query: 136 EGNPNQSDRREEKRSIRHDHR---EKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD 192
E + RREE+R + R E+ RE+ RRE++R R E E R E+ R +
Sbjct: 584 ERRREEERRREEERKREEERRREEERRREEERRREEERRREEEKRKEEERRKEEERKREE 643
Query: 193 EKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 231
EKR K E + RE++ RR +K R RE
Sbjct: 644 EKR-KEEERK---REEERRREEEKRKEEERRKEEERKRE 678
Score = 116 (45.9 bits), Expect = 0.00030, P = 0.00030
Identities = 31/106 (29%), Positives = 52/106 (49%)
Query: 132 RVALEGNPNQSDRREEKRSIRHDHR---EKPREDHGRREDKRSRRHSDNNEFEARSREDH 188
R A E + RREEKR R E+ R++ RRE++ R+ + + E R RE+
Sbjct: 451 RKAEERRKKEERRREEKRRREEKRRREEEERRKEEERREEEEKRKEEERRKDEERRREEE 510
Query: 189 YRRDE-KRPKRHESESYLREDQDRRGGDKS-STGRGDSSSHRHRER 232
R++E +R K E R++++RR ++ + R +ER
Sbjct: 511 KRKEEERREKERRREEGKRKEEERREKERRREEEKRKEEERREKER 556
Score = 114 (45.2 bits), Expect = 0.00053, P = 0.00053
Identities = 32/102 (31%), Positives = 48/102 (47%)
Query: 136 EGNPNQSDRREEKRSIRHDHR---EKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD 192
E + RREE+R + R E+ RE+ RRE++R R E E R RE+ RR+
Sbjct: 560 ERRREEERRREEERRREEERRREEERRREEERRREEERKREEERRRE-EERRREEERRRE 618
Query: 193 EKRPKRHES---ESYLREDQDRRGGDKSSTGRGDSSSHRHRE 231
E+R + E E +E++ +R +K R RE
Sbjct: 619 EERRREEEKRKEEERRKEEERKREEEKRKEEERKREEERRRE 660
Score = 112 (44.5 bits), Expect = 0.00093, P = 0.00093
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 136 EGNPNQSDRREEKRSIRHDHR---EKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD 192
E + +REE+R + R E+ +E+ RE++R R H+ E E R RE+ R++
Sbjct: 317 ERKREEERKREEERKREEERRKEEERKKEEEREREEERKREHNRKKE-EERKREEKRRKE 375
Query: 193 EKRPKRHE--SESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
E++ K E E +E++ R+ ++ R R +R
Sbjct: 376 EEKRKEEERRKEEERKEEERRKEEERKEEERRKEEERRKEKR 417
Score = 112 (44.5 bits), Expect = 0.00093, P = 0.00093
Identities = 33/121 (27%), Positives = 53/121 (43%)
Query: 120 KNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHR----EKPREDHGRREDKRSRRHS 175
KN R R E + +RR E+ R + R E+ RE+ +RE++R R
Sbjct: 276 KNQGKPRIMEKERSKEEEKRKEEERRREEERKREEERKREEERKREEERKREEERKREEE 335
Query: 176 DNNEFEARSREDHYRRDEKRPKRH---ESESYLREDQDRRGGDK-SSTGRGDSSSHRHRE 231
E E R +E+ R+E+R + H + E RE++ R+ +K R + E
Sbjct: 336 RRKE-EERKKEEEREREEERKREHNRKKEEERKREEKRRKEEEKRKEEERRKEEERKEEE 394
Query: 232 R 232
R
Sbjct: 395 R 395
>ZFIN|ZDB-GENE-040718-457 [details] [associations]
symbol:snrnp27 "small nuclear ribonucleoprotein 27
(U4/U6.U5)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] ZFIN:ZDB-GENE-040718-457
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397
GeneTree:ENSGT00700000104061 EMBL:BC076105 IPI:IPI00493242
RefSeq:NP_001002703.1 UniGene:Dr.77831 STRING:Q6DH74
Ensembl:ENSDART00000051655 GeneID:436976 KEGG:dre:436976 CTD:11017
eggNOG:NOG137437 HOVERGEN:HBG094352 KO:K12846 OMA:NIKKPRR
OrthoDB:EOG480HZF NextBio:20831397 ArrayExpress:Q6DH74 Bgee:Q6DH74
InterPro:IPR013957 Pfam:PF08648 Uniprot:Q6DH74
Length = 158
Score = 110 (43.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/87 (37%), Positives = 46/87 (52%)
Query: 144 RREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESES 203
RRE +RS R R++ R RRE +RSR D + +RSR H RR + P+RH S S
Sbjct: 11 RRERRRS-RSSSRDRERR---RRERERSRSR-DRDRRRSRSRSPHRRRS-RSPRRHRSSS 64
Query: 204 Y--LREDQDRRGGDKSSTGRGDSSSHR 228
LR+ +DRR D+ + H+
Sbjct: 65 LSPLRQ-KDRRDDDRKDVKEKPAKVHQ 90
>TAIR|locus:2132358 [details] [associations]
symbol:AT4G02720 "AT4G02720" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 InterPro:IPR009269 PANTHER:PTHR13087
Pfam:PF06047 EMBL:AY075686 EMBL:AY102143 IPI:IPI00531384
RefSeq:NP_192181.2 UniGene:At.34274 IntAct:Q8S9I4 PRIDE:Q8S9I4
EnsemblPlants:AT4G02720.1 GeneID:828193 KEGG:ath:AT4G02720
TAIR:At4g02720 HOGENOM:HOG000243180 InParanoid:Q8S9I4 OMA:PALDNEP
PhylomeDB:Q8S9I4 ProtClustDB:CLSN2714409 Genevestigator:Q8S9I4
Uniprot:Q8S9I4
Length = 422
Score = 122 (48.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 39/144 (27%), Positives = 64/144 (44%)
Query: 90 NEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKR 149
N + GG +D +S+ G E+ GK+DS S + G + ++S RR KR
Sbjct: 77 NADEIQDKNGGERDDNSK-GKERK-----GKSDSESESDGLRSRKRKSKSSRSKRRR-KR 129
Query: 150 SIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQ 209
S D + E ED+R RR S + ++RS ++ R K S+S D+
Sbjct: 130 SYDSDSESEGSESDSEEEDRRRRRKSSSKRKKSRSSRSFRKKRSHRRKTKYSDSDESSDE 189
Query: 210 DRRGG-DKSSTGRGDSSSHRHRER 232
D + SS+G + + + + R
Sbjct: 190 DSKAEISASSSGEEEDTKSKSKRR 213
>ZFIN|ZDB-GENE-050626-88 [details] [associations]
symbol:rbmx2 "RNA binding motif protein, X-linked 2"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-050626-88 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00600000084414 EMBL:AL935199
IPI:IPI00505218 Ensembl:ENSDART00000143373 Bgee:F1RAH8
Uniprot:F1RAH8
Length = 450
Score = 91 (37.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 45/173 (26%), Positives = 76/173 (43%)
Query: 72 RAFQR-GECTRG-DGCKFSHNEQ-RAANTGGGPQDRSSRWGHEKFEGFSW-GKNDSSSRA 127
R QR GE R DG + E+ R GG Q R E+ G G+ D
Sbjct: 271 RGRQRDGERQRERDGGRQRDGERDRERERDGGRQ-RDGERQRERDGGRQRDGERDRERER 329
Query: 128 TGSGRVALEGNPNQSDRRE--EKRSIRHDH-REKP--REDHGRREDKRSR---RHSDNNE 179
G GR +G+ ++ R+ +R + D RE+ R+ G R+ ++ R R D +
Sbjct: 330 DG-GRQR-DGDRDREQERDGGRQRDVERDRERERDGGRQRDGDRDQEQERDGGRQRDVEK 387
Query: 180 FEARSREDHYRRDEKRPKRHESESYLREDQDR-RGGDKSSTGRGDSSSHRHRE 231
+ R R+ +RD +R + E + + D++R R ++ D + +HR+
Sbjct: 388 VKERERDGGRQRDGERDRERERDGGRQRDEERVRQRERDRDRERDRGNGKHRD 440
Score = 88 (36.0 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 30/93 (32%), Positives = 45/93 (48%)
Query: 140 NQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRH 199
N+ DR +E+ ++ RE RE+ G++ D RRH++ + E R RE D++R +R
Sbjct: 219 NRRDRADEQEQLKEKERE--REE-GKKTD---RRHAETQQRE-RDREGEREGDKER-ERD 270
Query: 200 ESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
E Q R G + G D R RER
Sbjct: 271 RGRQRDGERQRERDGGRQRDGERD----RERER 299
Score = 86 (35.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 28/100 (28%), Positives = 44/100 (44%)
Query: 136 EGNPNQS-DRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEA-RSREDHYRRDE 193
EG+ + DR ++ R R+ R+ G R+ +R R + E R R+ +RD
Sbjct: 262 EGDKERERDRGRQRDGERQRERDGGRQRDGERDRERERDGGRQRDGERQRERDGGRQRDG 321
Query: 194 KRPKRHESESYLREDQDRRGGDKSSTGRG-DSSSHRHRER 232
+R + E + + D DR + GR D R RER
Sbjct: 322 ERDRERERDGGRQRDGDRDREQERDGGRQRDVERDRERER 361
Score = 85 (35.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/92 (27%), Positives = 41/92 (44%)
Query: 141 QSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHE 200
++DRR + R RE RE RE R R+ + R R+ +RD +R + E
Sbjct: 242 KTDRRHAETQQRERDREGEREGDKERERDRGRQRDGERQ---RERDGGRQRDGERDRERE 298
Query: 201 SESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
+ + D +R+ ++ + D R RER
Sbjct: 299 RDGGRQRDGERQR-ERDGGRQRDGERDRERER 329
Score = 72 (30.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 30 NNLNGAQILGRTIRVDHVA 48
+N NG +I GRTIRVDHVA
Sbjct: 95 DNFNGIKIKGRTIRVDHVA 113
>UNIPROTKB|G5EHZ9 [details] [associations]
symbol:MGCH7_ch7g1102 "Uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] GO:GO:0043581 EMBL:CM000230
EMBL:CM001237 InterPro:IPR019339 Pfam:PF10197 SMART:SM01083
InterPro:IPR022209 Pfam:PF12542 RefSeq:XP_003720497.1
EnsemblFungi:MGG_10324T0 GeneID:2681899 KEGG:mgr:MGG_10324
Uniprot:G5EHZ9
Length = 386
Score = 120 (47.3 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 43/148 (29%), Positives = 63/148 (42%)
Query: 83 DGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQS 142
DG K E+R + DR R H++ S ++ S R R E P
Sbjct: 172 DGVKKERREKRR-HRHRDEDDRDRR--HKRRRSHSRHRSPSRERHDDRRRHRSEDRPRDD 228
Query: 143 DRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYR-RDEKRPKRHES 201
+RR +R + R++PR+D RR RS R R ++ H + RD+ R +R S
Sbjct: 229 ERRSSRRDDSRE-RDRPRDD--RRY--RSTRDDSTERNRPRDKDRHRQGRDDSRERRRHS 283
Query: 202 ESYLREDQDRRGGDKSSTGRGDSSSHRH 229
+ R D DR G D+ R S R+
Sbjct: 284 D---RRDTDRTGRDERDRPRHSYSGGRN 308
>FB|FBgn0036619 [details] [associations]
symbol:Cpr72Ec "Cuticular protein 72Ec" species:7227
"Drosophila melanogaster" [GO:0005214 "structural constituent of
chitin-based cuticle" evidence=ISS] InterPro:IPR000618 Pfam:PF00379
PROSITE:PS00233 PROSITE:PS51155 EMBL:AE014296 GO:GO:0042302
EMBL:AY069040 RefSeq:NP_648884.1 UniGene:Dm.2319
EnsemblMetazoa:FBtr0075424 GeneID:39816 KEGG:dme:Dmel_CG4784
UCSC:CG4784-RA CTD:39816 FlyBase:FBgn0036619 eggNOG:NOG270263
GeneTree:ENSGT00700000105804 InParanoid:Q9VV46 OMA:FYSYVDA
OrthoDB:EOG400017 GenomeRNAi:39816 NextBio:815531 Uniprot:Q9VV46
Length = 429
Score = 118 (46.6 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 30/95 (31%), Positives = 49/95 (51%)
Query: 140 NQSDRRE-EKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR 198
N+ DR + EK+ IR D R++ R+D R+++R + D + + R + R D ++ +R
Sbjct: 193 NRDDREQREKQEIRQDQRKELRQD--LRQEQRQDQREDRRQDQREDRRQNQREDRRQDQR 250
Query: 199 HESESYLREDQ-DRRGGDKSSTGRGDSSSHRHRER 232
E REDQ + RG D+ R D R +R
Sbjct: 251 EER----REDQREERGEDQREERREDRREDRREDR 281
Score = 115 (45.5 bits), Expect = 0.00017, P = 0.00017
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 141 QSDRREEKRSI-RHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRH 199
+ D+RE++R R D R+ RED RR+D+R R D E + + R D + +R
Sbjct: 222 RQDQREDRRQDQREDRRQNQRED--RRQDQREERREDQREERGEDQREERREDRREDRRE 279
Query: 200 ESESYLREDQDRR 212
+ LR DQ+ R
Sbjct: 280 DRRQDLRIDQESR 292
>UNIPROTKB|F1NHR6 [details] [associations]
symbol:ZRSR2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00360 GO:GO:0005634
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003723 PANTHER:PTHR12620 GeneTree:ENSGT00530000063193
OMA:EDAFIEE EMBL:AADN02011332 IPI:IPI00585296
Ensembl:ENSGALT00000026711 Uniprot:F1NHR6
Length = 459
Score = 118 (46.6 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 49/163 (30%), Positives = 66/163 (40%)
Query: 70 VCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWG---KNDSSSR 126
+C F+R +C RG C F H + N +R R E+ S +N SS R
Sbjct: 298 ICGLFERQKCPRGKHCNFLHVFKNP-NNEFWEANRDIRVSPERTNQLSKNSERRNRSSHR 356
Query: 127 AT--GSGRVALEGNPNQSDRRE-EKRSIRHDHREKPREDHGR-REDKRSRRHSDNNEFEA 182
G R +P+ S RR E ++ + K R GR R +R R S +
Sbjct: 357 DDYYGRSRRRSSPSPDHSYRRNGESERKKNRRKNKRRRRSGRSRSRERRRSRSRGRKRRG 416
Query: 183 RSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSS 225
RSR Y R R R S S + R G K S+ RG +S
Sbjct: 417 RSRSRSYSRTRSR-SRSRSSS-----RSRSRGKKRSSSRGRNS 453
>TAIR|locus:2206001 [details] [associations]
symbol:AT1G60900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR000504
InterPro:IPR006529 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:AC018908 HSSP:P26368 eggNOG:NOG298004
HOGENOM:HOG000180745 KO:K12837 TIGRFAMs:TIGR01642 EMBL:AY140014
IPI:IPI00528167 PIR:E96634 RefSeq:NP_176287.3 UniGene:At.17780
UniGene:At.52293 ProteinModelPortal:Q8L716 SMR:Q8L716 PaxDb:Q8L716
PRIDE:Q8L716 EnsemblPlants:AT1G60900.1 GeneID:842382
KEGG:ath:AT1G60900 GeneFarm:4545 TAIR:At1g60900 InParanoid:Q8L716
OMA:TQMGGLP PhylomeDB:Q8L716 ProtClustDB:CLSN2918395
Genevestigator:Q8L716 Uniprot:Q8L716
Length = 589
Score = 119 (46.9 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 43/165 (26%), Positives = 68/165 (41%)
Query: 82 GDGCKFS---HNEQRAA-NTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEG 137
GDG S HNE + + +D SR H+ + S K G + +
Sbjct: 8 GDGVAISTENHNENYISLESSPFHEDSKSRESHDLKKDSS--KISEKDNENGRDKDGNKD 65
Query: 138 NPNQSDRREEKRSIRHDHREKPRE-DHGRREDK-RSRRHSDNNEFEARSR--------ED 187
+ DR EK R + + R+ D R +D+ R R H D + +R R +D
Sbjct: 66 RDREKDRDREKSRDRDREKSRDRDRDRERSKDRQRDRHHRDRHRDRSRERSEKRDDLDDD 125
Query: 188 HYRRDEKRPKRH--ESESYLREDQDRRGGDKSSTGRGDSSSHRHR 230
H+RR R +R + + +R + R +S + R S HRH+
Sbjct: 126 HHRRSRDRDRRRSRDRDREVRHRRRSRSRSRSRSERRSRSEHRHK 170
>DICTYBASE|DDB_G0294559 [details] [associations]
symbol:DDB_G0294559 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0294559 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 KO:K13107
EMBL:AAFI02000058 OMA:VFSQNRY RefSeq:XP_001134546.1
ProteinModelPortal:Q1ZXF8 EnsemblProtists:DDB0232419 GeneID:8624369
KEGG:ddi:DDB_G0294559 ProtClustDB:CLSZ2847454 Uniprot:Q1ZXF8
Length = 348
Score = 86 (35.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/89 (29%), Positives = 39/89 (43%)
Query: 137 GNPNQSDRREEKRSIRHDHREKPRE---DHGRREDKRSRRHSDNNEFEAR----SREDHY 189
G+ N+S+ + E R +H+HR R+ D R + R D + R SRE Y
Sbjct: 247 GDQNKSNDKLENRD-KHNHRNTSRDRIKDRSRSRSRERDRERDRERYRDRDRNRSREREY 305
Query: 190 R-RDEKRPKRHESESYLREDQDRRGGDKS 217
R R R K + Y ++R D+S
Sbjct: 306 RDRSRSRSKSRDRYRYRDRSREREYRDRS 334
Score = 82 (33.9 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 104 RSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPRE-D 162
R+ R K ++ + R T R+ +R E+ R+ R++ R +
Sbjct: 243 RNDRGDQNKSNDKLENRDKHNHRNTSRDRIKDRSRSRSRERDRERDRERYRDRDRNRSRE 302
Query: 163 HGRREDKRSRRHS-DNNEFEARSREDHYR-RDEKRPKRHESESYLR 206
R+ RSR S D + RSRE YR R R + +S Y R
Sbjct: 303 REYRDRSRSRSKSRDRYRYRDRSREREYRDRSRDRERYRDSRDYRR 348
Score = 81 (33.6 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 150 SIRHDHREKPRE-DHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLRED 208
SIR+D ++ + D DK + R++ + + RSR RD +R + +
Sbjct: 241 SIRNDRGDQNKSNDKLENRDKHNHRNTSRDRIKDRSRSRSRERDRERDRERYRDRDRNRS 300
Query: 209 QDRRGGDKSSTGRGDSSSHRHRER 232
++R D+S + +R+R+R
Sbjct: 301 REREYRDRSRSRSKSRDRYRYRDR 324
Score = 79 (32.9 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 23/65 (35%), Positives = 31/65 (47%)
Query: 145 REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSRE-DHYR-RDEKRPKRHESE 202
R RS D RE+ RE + R+ RSR + +RS+ D YR RD R + +
Sbjct: 275 RSRSRSRERD-RERDRERYRDRDRNRSREREYRDRSRSRSKSRDRYRYRDRSREREYRDR 333
Query: 203 SYLRE 207
S RE
Sbjct: 334 SRDRE 338
Score = 79 (32.9 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 140 NQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEF-EARSREDHYRRDEKRPKR 198
N +D E+K+ + EK + +RE+KR RR ++ E E R + ++DEK ++
Sbjct: 150 NNNDNDEKKKEKKKRKLEKKLKKKQKREEKRKRRENETPEQREKRKMDKQLKKDEKLLRK 209
Query: 199 HESE 202
+ +
Sbjct: 210 QDKK 213
Score = 69 (29.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/18 (66%), Positives = 16/18 (88%)
Query: 30 NNLNGAQILGRTIRVDHV 47
+NLNG +LG+TI+VDHV
Sbjct: 92 DNLNGINLLGKTIKVDHV 109
>WB|WBGene00013917 [details] [associations]
symbol:ZC504.3 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
GO:GO:0005524 GO:GO:0009792 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HOGENOM:HOG000233024 GeneTree:ENSGT00690000102162
EMBL:Z50029 PIR:T27620 RefSeq:NP_509746.2 ProteinModelPortal:Q23357
SMR:Q23357 STRING:Q23357 PaxDb:Q23357 EnsemblMetazoa:ZC504.3
GeneID:181247 KEGG:cel:CELE_ZC504.3 UCSC:ZC504.3 CTD:181247
WormBase:ZC504.3 InParanoid:Q23357 OMA:AGAHENI NextBio:913084
Uniprot:Q23357
Length = 668
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 33/113 (29%), Positives = 53/113 (46%)
Query: 123 SSSRATGSGRVALEGNPNQSDRREEKRSI--RHDHREKPREDHGRREDKRSRRHSDNNEF 180
S+ GS ++ + + + D RE + SI R+ H+ K + +++ RH D
Sbjct: 2 SNYSTNGSRKIRISNSDD--DSRETRFSIQPRNSHKTKEERYRDKEKERDHERHHDRERR 59
Query: 181 EARSREDHYR--RDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRE 231
+ R R+ R RD R S +Y R++ DRR + S R D SS R R+
Sbjct: 60 DDRYRKVDSRDHRDRNRRSPAGSRTYCRDEPDRRRNNHSDRNRRDRSSERDRD 112
>CGD|CAL0000980 [details] [associations]
symbol:orf19.4330 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0000980 EMBL:AACQ01000022 RefSeq:XP_720635.1 GeneID:3637822
KEGG:cal:CaO19.4330 eggNOG:NOG256789 Uniprot:Q5AG50
Length = 690
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 41/170 (24%), Positives = 69/170 (40%)
Query: 71 CRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWG-KNDSSSRAT- 128
C F G+ G+G K + G G + W ++ E S G K+D +
Sbjct: 284 CDEFNNGKGNAGNGGKGG----KGGKGGKGGKGGKGSWKVKRGENHSDGNKHDGQHKGNK 339
Query: 129 -GSGRVA-LEGNPNQSDRREEKRSI----RHDHREKPREDHGRREDKRSRRHSDNNEFEA 182
+ R + E + SD EK + + DH K +EDH +++ + H E E
Sbjct: 340 EDNHRDSDCECGYSSSDDEHEKPKVIDKKKQDHERKKQEDHDKKKQE-DHEHEKQKEHER 398
Query: 183 RSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
+ +EDH R EK HE E +E + + +K + + +E+
Sbjct: 399 KKQEDHER--EKEDHEHEKE---KEHEKEKEHEKEKEHEKEKEHEKEKEK 443
>UNIPROTKB|Q5AG50 [details] [associations]
symbol:CaO19.4330 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0000980 EMBL:AACQ01000022 RefSeq:XP_720635.1 GeneID:3637822
KEGG:cal:CaO19.4330 eggNOG:NOG256789 Uniprot:Q5AG50
Length = 690
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 41/170 (24%), Positives = 69/170 (40%)
Query: 71 CRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWG-KNDSSSRAT- 128
C F G+ G+G K + G G + W ++ E S G K+D +
Sbjct: 284 CDEFNNGKGNAGNGGKGG----KGGKGGKGGKGGKGSWKVKRGENHSDGNKHDGQHKGNK 339
Query: 129 -GSGRVA-LEGNPNQSDRREEKRSI----RHDHREKPREDHGRREDKRSRRHSDNNEFEA 182
+ R + E + SD EK + + DH K +EDH +++ + H E E
Sbjct: 340 EDNHRDSDCECGYSSSDDEHEKPKVIDKKKQDHERKKQEDHDKKKQE-DHEHEKQKEHER 398
Query: 183 RSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
+ +EDH R EK HE E +E + + +K + + +E+
Sbjct: 399 KKQEDHER--EKEDHEHEKE---KEHEKEKEHEKEKEHEKEKEHEKEKEK 443
>UNIPROTKB|G4NEH6 [details] [associations]
symbol:MGG_00102 "Cell cycle control protein cwf19"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR011146 GO:GO:0003824
EMBL:CM001235 GO:GO:0005681 SUPFAM:SSF54197 GO:GO:0000398
InterPro:IPR006768 InterPro:IPR006767 Pfam:PF04677 Pfam:PF04676
RefSeq:XP_003719037.1 EnsemblFungi:MGG_00102T0 GeneID:2674386
KEGG:mgr:MGG_00102 Uniprot:G4NEH6
Length = 728
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 31/94 (32%), Positives = 43/94 (45%)
Query: 140 NQSDRREEKRSIRHDHREKPREDH-GRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR 198
++ +R E K RH HR D G RE RH D++ R R H R D + +R
Sbjct: 20 HEQERAERKEKRRHHHRRDRSSDRTGDRE-----RHRDHDRDSDRHRHKHRRHDSRERER 74
Query: 199 HESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
E R + R+ D++ + DSS RHR R
Sbjct: 75 DRDEHGHRHKRSRKDEDENDRDK-DSSRRRHRHR 107
>DICTYBASE|DDB_G0282873 [details] [associations]
symbol:DDB_G0282873 "RNA-binding region RNP-1
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0282873 GO:GO:0000166
EMBL:AAFI02000047 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:NOG313287
RefSeq:XP_639372.1 ProteinModelPortal:Q54RW5
EnsemblProtists:DDB0233751 GeneID:8623811 KEGG:ddi:DDB_G0282873
InParanoid:Q54RW5 OMA:RDRDDHD Uniprot:Q54RW5
Length = 952
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 46/146 (31%), Positives = 62/146 (42%)
Query: 99 GGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRV---ALEGN-PNQ--SDRREEKRSIR 152
GGP + G G S G R S + + G+ P++ D EKR
Sbjct: 442 GGPPPPNGSGGSGSSVG-SGGSGSGGGRPYSSSKRDEWSSGGSSPDRYGGDYHGEKRKRD 500
Query: 153 HDHREKPRE-DHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR-HESESYLREDQD 210
D E+ RE D R ++R R DN R R+D+ RRD R + H+S S R+ D
Sbjct: 501 DDVDERERERDRERDRERRERDDYDNRRDRDRDRDDYDRRDRDRDRDDHDSGSSRRDRDD 560
Query: 211 RRGGDKSSTGRG----DSSSHRHRER 232
G+ SS R DS S R+R
Sbjct: 561 HDSGNNSSNRRDRDDHDSGSSNRRDR 586
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 35/115 (30%), Positives = 52/115 (45%)
Query: 120 KNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDH--GRREDKRSRRHSDN 177
++D S ++ R + N S+RR+ + R+DH G + S R D
Sbjct: 546 RDDHDSGSSRRDRDDHDSGNNSSNRRDRDDHDSGSSNRRDRDDHDSGSSSNSGSSRR-DR 604
Query: 178 NEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
++ ++ S RRD R H+S S R D+DR D SS+ R D R RER
Sbjct: 605 DDHDSNSNSSS-RRDRDRDD-HDSSSSSRRDRDRDDHDSSSSSRRDRDRDRDRER 657
Score = 113 (44.8 bits), Expect = 0.00082, P = 0.00082
Identities = 38/149 (25%), Positives = 61/149 (40%)
Query: 88 SHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREE 147
S ++ ++G +R R H+ G S + D +GS + ++ D
Sbjct: 554 SRRDRDDHDSGNNSSNRRDRDDHDS--GSS-NRRDRDDHDSGSSSNSGSSRRDRDDHDSN 610
Query: 148 KRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYR-----RDEKRPKRHESE 202
S R++ R+DH R R D+++ + SR D R RD R SE
Sbjct: 611 SNS--SSRRDRDRDDHDSSSSSRRDRDRDDHDSSSSSRRDRDRDRDRERDRDRSSDRRSE 668
Query: 203 SYLREDQDRRGGDKSSTGRGDSSSHRHRE 231
S +++D R ++SS D S R RE
Sbjct: 669 STRDKERDDRSDNRSSRDHYDRDSTRDRE 697
>UNIPROTKB|B4DH15 [details] [associations]
symbol:DDX23 "cDNA FLJ54028, highly similar to Probable
ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA]
GO:GO:0004386 UniGene:Hs.130098 HGNC:HGNC:17347 EMBL:AC117498
EMBL:AK294877 IPI:IPI01021148 STRING:B4DH15 Ensembl:ENST00000547135
Uniprot:B4DH15
Length = 108
Score = 93 (37.8 bits), Expect = 0.00022, P = 0.00022
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 130 SGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRR----EDKRSRRHSDNNEFEARSR 185
+G +A + + + S +EE++ R RE+ R D R+ +D++ R D +RSR
Sbjct: 2 AGELADKKDRDASPSKEERKRSRTPDRERDR-DRDRKSSPSKDRKRHRSRDRRRGGSRSR 60
Query: 186 EDHYRRDEKRPKRH-ESESYLREDQDRRGGDKSSTG-RGDSSSHRHR 230
+ +R +RH E E D++++ D+ G R D R R
Sbjct: 61 SRSRSKSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSR 107
>UNIPROTKB|K7GKM6 [details] [associations]
symbol:RPTN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001751 InterPro:IPR002048 InterPro:IPR011992
PROSITE:PS00303 PROSITE:PS50222 Prosite:PS00018 Gene3D:1.10.238.10
InterPro:IPR018247 InterPro:IPR013787 Pfam:PF01023
GeneTree:ENSGT00530000063634 EMBL:CU633752
Ensembl:ENSSSCT00000034040 Uniprot:K7GKM6
Length = 662
Score = 116 (45.9 bits), Expect = 0.00023, P = 0.00023
Identities = 34/161 (21%), Positives = 73/161 (45%)
Query: 80 TRGDGCKFSHNEQRAANTGGGPQDR---SSRWGH--EKFEGFSWGKNDSSSRATGSGRVA 134
T+G G + ++++ ++ G DR SS +G + +G +G+ D +++ G+
Sbjct: 460 TQGQGSHYGQIDRQSQSSHYGQTDRQGQSSHYGQTDRQGQGSHYGQTDRQGQSSHYGQTD 519
Query: 135 LEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARS-REDHYRRDE 193
+G + + E + RH ++ ED R+ + + H ++ + R R+ H D+
Sbjct: 520 RQGQGSHYGQTERQEQTRHRRDKQTHEDEQTRQRRDKQTHEEDQNCQQRQDRQTH--EDK 577
Query: 194 KRPKRHESESYLREDQDRRGGDK---SSTGRGDSSSHRHRE 231
+R + + + R Q R +K + G+ S RH +
Sbjct: 578 ERYQGSQDQQSHRTQQGRANREKFHMNEEGQSRGSQGRHSD 618
Score = 113 (44.8 bits), Expect = 0.00052, P = 0.00052
Identities = 40/168 (23%), Positives = 76/168 (45%)
Query: 75 QRGECTR-GDGCKFSHNEQRAANTGGGPQDR---SSRWGHE--KFEGFSWGKNDSSSRAT 128
Q G+ R G G + ++++ + G DR SS +GH + +G +G+ D S+++
Sbjct: 418 QYGQTERQGQGSHYGQIDRQSQGSHYGQTDRQGQSSHYGHTDTQGQGSHYGQIDRQSQSS 477
Query: 129 GSGRVALEGNPN---QSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSR 185
G+ +G + Q+DR+ + R+ +G+ + + H E R
Sbjct: 478 HYGQTDRQGQSSHYGQTDRQGQGSHYGQTDRQGQSSHYGQTDRQGQGSHYGQTE---RQE 534
Query: 186 EDHYRRDEKRPKRHESE-SYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
+ +RRD++ HE E + R D+ D++ R D +H +ER
Sbjct: 535 QTRHRRDKQT---HEDEQTRQRRDKQTHEEDQNCQQRQDRQTHEDKER 579
>TAIR|locus:2076121 [details] [associations]
symbol:AT3G23900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016926
"protein desumoylation" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0050665 "hydrogen peroxide
biosynthetic process" evidence=RCA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR001298 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 PROSITE:PS50103 SMART:SM00360
SMART:SM00557 EMBL:CP002686 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003723 InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR017868
Pfam:PF00630 PROSITE:PS50194 IPI:IPI00521323 RefSeq:NP_001189958.1
RefSeq:NP_189032.2 UniGene:At.37625 UniGene:At.73245
ProteinModelPortal:F4J5A7 SMR:F4J5A7 PRIDE:F4J5A7
EnsemblPlants:AT3G23900.1 EnsemblPlants:AT3G23900.3 GeneID:821973
KEGG:ath:AT3G23900 OMA:HIAYVEY Uniprot:F4J5A7
Length = 987
Score = 111 (44.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 40/144 (27%), Positives = 67/144 (46%)
Query: 89 HNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEK 148
H+ + P+ R S G E E S + DSSSR G + + G+ + R+E K
Sbjct: 586 HSSSSRRSRSVSPKKRKS--GQEDSE-LSRLRRDSSSR--GEKKSSRAGSRSPRRRKEVK 640
Query: 149 RSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLRED 208
+ R D K + RR RSR D+ + + +SR++ + +KR S S RED
Sbjct: 641 STPRDDEENKVK----RRTRSRSRSVEDSADIKDKSRDEELKHHKKR-----SRSRSRED 691
Query: 209 QDRRGGDKSSTGRGDSSSHRHRER 232
+ + + ++ D + +HR+R
Sbjct: 692 RSKT---RDTSRNSDEAKQKHRQR 712
Score = 47 (21.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 70 VCRAFQRGECTRGDGCKFSHNEQRAANT 97
VCR + G C CK +H Q T
Sbjct: 259 VCREYLNGRCVNSM-CKLNHPPQNLLMT 285
>RGD|1309863 [details] [associations]
symbol:Nsrp1 "nuclear speckle splicing regulatory protein 1"
species:10116 "Rattus norvegicus" [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IEA;ISO;ISS]
[GO:0003729 "mRNA binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA;ISO;ISS] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA;ISO;ISS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA;ISO;ISS] [GO:0032502
"developmental process" evidence=IEA;ISO;ISS] RGD:1309863
GO:GO:0008380 GO:GO:0016607 GO:GO:0003729 GO:GO:0006397
GO:GO:0006913 GO:GO:0030529 GO:GO:0032502 GO:GO:0000381
GeneTree:ENSGT00700000104144 CTD:84081 eggNOG:NOG310283
HOVERGEN:HBG081043 KO:K13206 OrthoDB:EOG43XV3P InterPro:IPR018612
Pfam:PF09745 OMA:NDKYRDR EMBL:BC099120 IPI:IPI00370368
RefSeq:NP_001032266.1 UniGene:Rn.145937 PhosphoSite:Q4FZU3
PRIDE:Q4FZU3 Ensembl:ENSRNOT00000030749 GeneID:303346
KEGG:rno:303346 InParanoid:Q4FZU3 NextBio:651186
ArrayExpress:Q4FZU3 Genevestigator:Q4FZU3
GermOnline:ENSRNOG00000022502 Uniprot:Q4FZU3
Length = 547
Score = 115 (45.5 bits), Expect = 0.00024, P = 0.00024
Identities = 43/162 (26%), Positives = 68/162 (41%)
Query: 88 SHNEQRAANTGGGPQ----DRSSRW-GHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQS 142
+H R+++ GG RSS+ GHE G + + R E +
Sbjct: 283 NHTHSRSSSEEGGLSTKYHSRSSQSRGHEHKGGQHQDRQSRDQESCHKDRSHREEKSSHR 342
Query: 143 DRREEKRSI---RHDHREKPR-EDHGRREDKRSRRHSDNNEFEARSRE--DHYRRDEKRP 196
R + RH+H +KP+ G R+D+ +R ++ + + R+ DH R EK
Sbjct: 343 HREASHKDHHWKRHEHEDKPKGRGQGERQDREWKREKYSSREQEKDRQWNDHDRYSEKEK 402
Query: 197 KRHESESYLREDQDR-RGGDK-----SSTGRGDSSSHRHRER 232
K E E + + ++R G K G G SS RHR+R
Sbjct: 403 KGKEKEEHRKARRERCEDGAKYRERKKPEGSGQSSE-RHRDR 443
>ZFIN|ZDB-GENE-040426-1619 [details] [associations]
symbol:zc3h13 "zinc finger CCCH-type containing
13" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 ZFIN:ZDB-GENE-040426-1619
GO:GO:0008270 GO:GO:0003676 GeneTree:ENSGT00700000104144 CTD:23091
HOVERGEN:HBG107115 EMBL:BX005426 EMBL:BX088652 IPI:IPI00609889
RefSeq:NP_956816.2 UniGene:Dr.76587 Ensembl:ENSDART00000054064
GeneID:560041 KEGG:dre:560041 HOGENOM:HOG000039963 OMA:CCKALCA
NextBio:20883262 ArrayExpress:B0S5D8 Bgee:B0S5D8 Uniprot:B0S5D8
Length = 1759
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 49/169 (28%), Positives = 76/169 (44%)
Query: 72 RAFQRG---ECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRAT 128
R++ RG E R D + NE R TG G S EK G + D+SS
Sbjct: 625 RSYGRGHGREDMRNDARTDNRNESRVERTGRGRGHGSDVT--EKARGSRASQADNSS--- 679
Query: 129 GSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDH 188
SG + E ++S E+ + R+ R++ +D R E R R +NE R R D+
Sbjct: 680 ASGHDSWE---SRSSGLRERSTERNTDRDR-YDDRPRGEQPRDERRGAHNE---RDRRDN 732
Query: 189 YRRDEKRP----KRHESESYLREDQ-DRRGGDKSSTGRGDSSSHRHRER 232
R+++ P +++ E RE++ D R D+ R D + R +ER
Sbjct: 733 REREQRAPSPVRQQNRGEDLEREERRDDRRNDRGDDRRDDRTREREKER 781
Score = 119 (46.9 bits), Expect = 0.00031, P = 0.00031
Identities = 40/154 (25%), Positives = 64/154 (41%)
Query: 81 RGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPN 140
RG G S ++A + D SS GH+ +E S G + S+ + R + P
Sbjct: 657 RGHG---SDVTEKARGSRASQADNSSASGHDSWESRSSGLRERSTERN-TDRDRYDDRPR 712
Query: 141 QSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHE 200
R+E+R H E+ R D+ RE + N E RE+ RRD++R R +
Sbjct: 713 GEQPRDERRGA---HNERDRRDNREREQRAPSPVRQQNRGEDLEREE--RRDDRRNDRGD 767
Query: 201 S--ESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
+ RE + R ++ + R +ER
Sbjct: 768 DRRDDRTREREKERDREREREREREKEREREKER 801
>UNIPROTKB|Q15696 [details] [associations]
symbol:ZRSR2 "U2 small nuclear ribonucleoprotein auxiliary
factor 35 kDa subunit-related protein 2" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030628 "pre-mRNA 3'-splice
site binding" evidence=IDA] [GO:0005689 "U12-type spliceosomal
complex" evidence=IDA] [GO:0000245 "spliceosomal complex assembly"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IMP]
[GO:0008380 "RNA splicing" evidence=IC] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0000166 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0000245 eggNOG:NOG304335
PANTHER:PTHR12620 GO:GO:0005689 GO:GO:0030628 HOVERGEN:HBG054605
HPA:HPA047500 HOGENOM:HOG000049279 OrthoDB:EOG4CNQRM EMBL:D49677
EMBL:AC004106 EMBL:AC096510 EMBL:BC113454 EMBL:BC113480
IPI:IPI00018954 RefSeq:NP_005080.1 UniGene:Hs.171909
ProteinModelPortal:Q15696 SMR:Q15696 STRING:Q15696
PhosphoSite:Q15696 DMDM:2833266 PaxDb:Q15696 PRIDE:Q15696
DNASU:8233 Ensembl:ENST00000307771 GeneID:8233 KEGG:hsa:8233
UCSC:uc004cxg.4 CTD:8233 GeneCards:GC0XP015808 H-InvDB:HIX0017758
HGNC:HGNC:23019 MIM:300028 neXtProt:NX_Q15696 PharmGKB:PA162410930
InParanoid:Q15696 OMA:EDAFIEE PhylomeDB:Q15696 ChiTaRS:ZRSR2
GenomeRNAi:8233 NextBio:30981 ArrayExpress:Q15696 Bgee:Q15696
CleanEx:HS_ZRSR2 Genevestigator:Q15696 GermOnline:ENSG00000169249
Uniprot:Q15696
Length = 482
Score = 114 (45.2 bits), Expect = 0.00026, P = 0.00026
Identities = 42/162 (25%), Positives = 62/162 (38%)
Query: 70 VCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATG 129
+C F+ +C RG C F H R N +R ++ G S+GKN G
Sbjct: 311 ICGLFEIQQCPRGKHCNFLH-VFRNPNNEFWEANRDIYLSPDR-TGSSFGKNSERRERMG 368
Query: 130 SGR---VALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSRE 186
L G N S KR+ + K G++ KR+ + + + +R R
Sbjct: 369 HHDDYYSRLRGRRNPSPDHSYKRN--GESERKSSRHRGKKSHKRTSKSRERHNSRSRGRN 426
Query: 187 DHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHR 228
RD R + S S R + RR +SS+ R S R
Sbjct: 427 RDRSRDRSRGRGSRSRSRSRSRRSRRSRSQSSS-RSRSRGRR 467
>FB|FBgn0031883 [details] [associations]
symbol:CG11266 species:7227 "Drosophila melanogaster"
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014134
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0000381 HSSP:Q60900
TIGRFAMs:TIGR01622 KO:K13091 OMA:AGWDTEI
GeneTree:ENSGT00690000102089 UniGene:Dm.7322 GeneID:33989
KEGG:dme:Dmel_CG11266 FlyBase:FBgn0031883 ChiTaRS:CG11266
GenomeRNAi:33989 NextBio:786302 EMBL:AY051860 RefSeq:NP_609095.1
RefSeq:NP_723243.1 SMR:Q9VM49 IntAct:Q9VM49 MINT:MINT-745605
STRING:Q9VM49 EnsemblMetazoa:FBtr0089636 EnsemblMetazoa:FBtr0089640
UCSC:CG11266-RA InParanoid:Q9VM49 Uniprot:Q9VM49
Length = 594
Score = 115 (45.5 bits), Expect = 0.00027, P = 0.00026
Identities = 44/144 (30%), Positives = 56/144 (38%)
Query: 98 GGGPQDRSSRWGHEKFEG--FSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDH 155
GGG D + G G S K SR+ R +G ++ DR E+ S R
Sbjct: 40 GGGHDDDYAENGPRNGSGGGSSHKKQSKRSRSRSGSR---DGK-SRRDRGNERSSHRDKD 95
Query: 156 REKPREDHGRREDKRSRRHSDNNEFEARSRE-DHYRRDEKRPKRHESESYL-----REDQ 209
+E+ R G D+ R D + R RE D RR R +R Y R +
Sbjct: 96 KERDRNRDGGDRDRHRREGGDRDRERERERERDRSRRSRSRDERGGGGRYGDRDKDRRSR 155
Query: 210 DRRGGDKS-STGRGDSSSHRHRER 232
DRRGG KS R R R R
Sbjct: 156 DRRGGSKSLQVDRSRDKRRRSRSR 179
>UNIPROTKB|E1C1G5 [details] [associations]
symbol:ZC3H18 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000571 PROSITE:PS50103 GO:GO:0005634
GO:GO:0008270 GO:GO:0003676 GeneTree:ENSGT00650000093061
OMA:HSVDSED EMBL:AADN02067428 EMBL:AADN02067429 IPI:IPI00585449
Ensembl:ENSGALT00000009872 Uniprot:E1C1G5
Length = 955
Score = 97 (39.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 27/85 (31%), Positives = 45/85 (52%)
Query: 138 NPNQSDR-REEKRSIRHDHREKPRE---DHGRREDKRSRRHSDNNEFEARSREDHYRRDE 193
N + +R RE +R R RE+ RE + RR+ +R R + E + R++ + R+
Sbjct: 393 NYRERERERERERENRQRERERERERERERERRQRERERERERERDKERQRRKEEWERER 452
Query: 194 KRPKRHESESYLRE-DQDR-RGGDK 216
+R KR E + R+ D+DR R D+
Sbjct: 453 ERVKRDEKDRQHRDRDRDRDRDRDR 477
Score = 63 (27.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 71 CRAFQRGECTRGDGCKFSH 89
CR F +G CT G C+F H
Sbjct: 217 CRFFMKGHCTWGMNCRFIH 235
>FB|FBgn0004924 [details] [associations]
symbol:Top1 "Topoisomerase 1" species:7227 "Drosophila
melanogaster" [GO:0006265 "DNA topological change" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003917 "DNA topoisomerase
type I activity" evidence=ISS;NAS;IDA] [GO:0005703 "polytene
chromosome puff" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0003916 "DNA topoisomerase activity" evidence=IDA] [GO:0005665
"DNA-directed RNA polymerase II, core complex" evidence=IDA]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0002168
"instar larval development" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009790 "embryo development"
evidence=IMP] [GO:0003918 "DNA topoisomerase type II
(ATP-hydrolyzing) activity" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0006468 "protein
phosphorylation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0004672 "protein kinase activity" evidence=IDA]
[GO:0031298 "replication fork protection complex" evidence=IBA]
[GO:0006338 "chromatin remodeling" evidence=IBA] [GO:0006260 "DNA
replication" evidence=IBA] InterPro:IPR001631 InterPro:IPR008336
InterPro:IPR009054 InterPro:IPR011010 InterPro:IPR013030
InterPro:IPR013034 InterPro:IPR013499 InterPro:IPR013500
InterPro:IPR014711 InterPro:IPR014727 InterPro:IPR018521
Pfam:PF01028 Pfam:PF02919 PRINTS:PR00416 PROSITE:PS00176
SMART:SM00435 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0007059 GO:GO:0005730 GO:GO:0008283 GO:GO:0006260
EMBL:AE014298 GO:GO:0048477 GO:GO:0006338 GO:GO:0009790
GO:GO:0004672 GO:GO:0005719 GO:GO:0030261 GO:GO:0002168
GO:GO:0005703 GO:GO:0031298 GO:GO:0006265 SUPFAM:SSF56349
GO:GO:0003918 eggNOG:COG3569 KO:K03163 GO:GO:0003917
Gene3D:1.10.10.41 Gene3D:1.10.132.10 Gene3D:2.170.11.10
Gene3D:3.90.15.10 InterPro:IPR025834 Pfam:PF14370 SUPFAM:SSF46596
SUPFAM:SSF56741 CTD:7150 EMBL:M74557 EMBL:U80064 PIR:S35521
RefSeq:NP_001014742.1 RefSeq:NP_511161.2 UniGene:Dm.2912
ProteinModelPortal:P30189 SMR:P30189 IntAct:P30189 MINT:MINT-748832
STRING:P30189 PaxDb:P30189 PRIDE:P30189 GeneID:32458
KEGG:dme:Dmel_CG6146 FlyBase:FBgn0004924 InParanoid:P30189
OrthoDB:EOG4MCVFF ChiTaRS:TOP1 GenomeRNAi:32458 NextBio:778562
Bgee:P30189 GermOnline:CG6146 Uniprot:P30189
Length = 972
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 44/166 (26%), Positives = 68/166 (40%)
Query: 69 GVCRAFQ-RGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRA 127
G C Q G T G G H+ ++++ SS+ H E + SS +
Sbjct: 17 GSCEVVQSNGVTTNGHG---HHHHHHSSSSSSSKHKSSSKDKHRDRE-----REHKSSNS 68
Query: 128 TGSGRVALEGNPNQSDR-REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSRE 186
+ S + E + D+ R + S HR+K +E G RS S + + + S
Sbjct: 69 SSSSK---EHKSSSRDKDRHKSSSSSSKHRDKDKERDGSSNSHRSGSSSSHKDKDGSSSS 125
Query: 187 DHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
H + KR S+ R D+D+ G SS+ SSS R +ER
Sbjct: 126 KH-KSSSGHHKR-SSKDKERRDKDKDRGSSSSSRHKSSSSSRDKER 169
>DICTYBASE|DDB_G0274361 [details] [associations]
symbol:prpf38a "putative U4/U6.U5 small nuclear
ribonucleoparticle-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] dictyBase:DDB_G0274361
Pfam:PF03371 GenomeReviews:CM000151_GR EMBL:AAFI02000012
eggNOG:NOG241318 KO:K12849 InterPro:IPR005037 InterPro:IPR024767
PANTHER:PTHR23142 Pfam:PF12871 RefSeq:XP_643885.1
EnsemblProtists:DDB0233545 GeneID:8619311 KEGG:ddi:DDB_G0274361
InParanoid:Q86IV3 OMA:PYWKEKC ProtClustDB:CLSZ2515186
Uniprot:Q86IV3
Length = 515
Score = 114 (45.2 bits), Expect = 0.00028, P = 0.00028
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 121 NDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEF 180
+ SSS T + +E N N++++ +EK H+EK +E+ E+KR + DN +
Sbjct: 252 SSSSSITTTTTTTTIE-NENENEKHKEK------HKEKHKENENENENKRYKE-KDNKDG 303
Query: 181 EARSREDHYR-RDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
E D + RD R + ++Y +D DR D+S+ DS+ R R+R
Sbjct: 304 EKERYIDRDKYRDRDRDSYRDRDNYKYDDNDR---DRSTKYHKDSNRDRDRDR 353
>ZFIN|ZDB-GENE-040426-1146 [details] [associations]
symbol:traf3ip1 "TNF receptor-associated factor 3
interacting protein 1" species:7955 "Danio rerio" [GO:0008017
"microtubule binding" evidence=IEA] [GO:0048793 "pronephros
development" evidence=IMP] [GO:0042384 "cilium assembly"
evidence=IGI;ISS;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] InterPro:IPR018799 ZFIN:ZDB-GENE-040426-1146
GO:GO:0005737 GO:GO:0005856 GO:GO:0042384 GO:GO:0048793
EMBL:BC056776 IPI:IPI00509049 RefSeq:NP_956894.1 UniGene:Dr.18537
ProteinModelPortal:Q6PGZ3 SMR:Q6PGZ3 STRING:Q6PGZ3 GeneID:393572
KEGG:dre:393572 CTD:26146 eggNOG:NOG304934 HOGENOM:HOG000007159
HOVERGEN:HBG101388 InParanoid:Q6PGZ3 OrthoDB:EOG40S0GB
NextBio:20814593 PANTHER:PTHR31363 Uniprot:Q6PGZ3
Length = 629
Score = 115 (45.5 bits), Expect = 0.00029, P = 0.00029
Identities = 38/142 (26%), Positives = 63/142 (44%)
Query: 91 EQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRS 150
+Q+ + QD+ +R G E K S +GS + +P+Q +E KR
Sbjct: 135 DQKGKPSTSRSQDKENREGREHHRDREERKGIKES--SGSRE---QKDPDQPKDQESKRD 189
Query: 151 IRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQD 210
+ R+ R D GR ++ R D ++ +R RE +D+ R K E E +++
Sbjct: 190 DKDRRRDAERSDKGRERERTKDRDRDKDK--SRDRE----KDKTREKEREREKDRNREKE 243
Query: 211 RRGGDKSSTGRGDSSSHRHRER 232
R DK + + SH+ RER
Sbjct: 244 RER-DKDRDKKKERESHKDRER 264
>UNIPROTKB|G4NGT8 [details] [associations]
symbol:MGG_17707 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CM001236
RefSeq:XP_003719815.1 EnsemblFungi:MGG_17707T0 GeneID:12986241
KEGG:mgr:MGG_17707 Uniprot:G4NGT8
Length = 1008
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 54/182 (29%), Positives = 73/182 (40%)
Query: 72 RAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSG 131
R R TR H+ Q + P DR SR + + S+ ++ S SR
Sbjct: 464 RERSRDRHTRDRSRARDHSRQSRIDERRRP-DRRSRSPRPRRDSRSY-RDRSRSRVKTDR 521
Query: 132 RVALEGNPNQSDRREEKRS-----IRHDHREKPREDHGRREDKRSRRHSDNNEFEARSRE 186
R + + DRR+++R IR D R R D GR++D+R RH D R R
Sbjct: 522 RDERSRSRTRVDRRDDRRDRSRSRIRRDDRRDERRD-GRKDDRRDNRHDDR-----RDRR 575
Query: 187 DHYRRDEKRPKRHESESYLREDQDRRGGDKS-----STGRG-----------DSSSHRHR 230
D R + P+R S S R +RRG D+ ST R D S HR
Sbjct: 576 DQSRSRARSPRRARSSS--RRATERRGADRGVSPTRSTWRQRSRSRARSPRRDRSRHRDN 633
Query: 231 ER 232
R
Sbjct: 634 SR 635
>MGI|MGI:2144305 [details] [associations]
symbol:Ccdc55 "coiled-coil domain containing 55"
species:10090 "Mus musculus" [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016607
"nuclear speck" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0032502 "developmental process"
evidence=ISO] MGI:MGI:2144305 GO:GO:0008380 GO:GO:0016607
GO:GO:0003729 GO:GO:0006397 GO:GO:0006913 GO:GO:0030529
EMBL:AL603842 GO:GO:0032502 GO:GO:0000381
GeneTree:ENSGT00700000104144 eggNOG:NOG310283 HOVERGEN:HBG081043
KO:K13206 OrthoDB:EOG43XV3P InterPro:IPR018612 Pfam:PF09745
OMA:NDKYRDR EMBL:AK168573 EMBL:BC089560 IPI:IPI00345960
RefSeq:NP_001012309.1 UniGene:Mm.156195 PhosphoSite:Q5NCR9
PRIDE:Q5NCR9 Ensembl:ENSMUST00000102494 GeneID:237859
KEGG:mmu:237859 UCSC:uc007kgg.1 CTD:237859 InParanoid:Q5NCR9
NextBio:383528 Bgee:Q5NCR9 CleanEx:MM_CCDC55 Genevestigator:Q5NCR9
GermOnline:ENSMUSG00000037958 Uniprot:Q5NCR9
Length = 542
Score = 114 (45.2 bits), Expect = 0.00031, P = 0.00031
Identities = 49/168 (29%), Positives = 70/168 (41%)
Query: 72 RAFQRGECT-RGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGS 130
RA R RG G K H+ + + + G QDR SR + S K+ S S
Sbjct: 285 RAHSRSSSEERGLGTK--HHSRGSQSRGHEHQDRQSR------DQESCHKDRSHREEKSS 336
Query: 131 GRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYR 190
R + + ++ E+ ++ R+D RE KR + S E + R R DH R
Sbjct: 337 HRHREASHKDHYWKKHEQEDKLKGREQEERQD---REGKREKYSSREQERD-RQRNDHDR 392
Query: 191 RDEKRPKRHESESYLR------EDQDRRGGDKSSTGRGDSSSHRHRER 232
EK KR E E + + ED + + G G SS RHR+R
Sbjct: 393 YSEKEKKRKEKEEHTKARRERCEDSGKHREREKPEGHGQSSE-RHRDR 439
>UNIPROTKB|G4MRF7 [details] [associations]
symbol:MGG_02411 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CM001231
RefSeq:XP_003709196.1 EnsemblFungi:MGG_02411T0 GeneID:2681508
KEGG:mgr:MGG_02411 Uniprot:G4MRF7
Length = 396
Score = 112 (44.5 bits), Expect = 0.00034, P = 0.00034
Identities = 38/118 (32%), Positives = 53/118 (44%)
Query: 125 SRATGSGRVALEGNPNQSDRREEKRS-IRHDHRE---KPREDHGRREDKRS---RRHSDN 177
S A + V E + DR ++ IR + R K R++ GRRE + S RR D+
Sbjct: 263 SGAKRAREVDKERRREREDREKDVDDLIREERRRAKRKRRDEEGRREHRHSGENRRRGDD 322
Query: 178 NEFEARS---REDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
+E R R+D +RR +R H + RE DRR D+S R S R R
Sbjct: 323 DEKRERRHRHRDDEHRRSYRREDGHRERKH-REGDDRRRRDRSKERRRSRSPRRSPRR 379
>UNIPROTKB|Q06A99 [details] [associations]
symbol:SRSF4 "SFRS4" species:9823 "Sus scrofa" [GO:0048025
"negative regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0048025
eggNOG:COG0724 HOVERGEN:HBG002295 GeneTree:ENSGT00700000104103
HOGENOM:HOG000276234 KO:K12893 CTD:6429 OMA:REHAKSE
OrthoDB:EOG41C6X9 EMBL:FP236541 EMBL:DQ972965 RefSeq:NP_001070684.1
UniGene:Ssc.11128 Ensembl:ENSSSCT00000003983 GeneID:768101
KEGG:ssc:768101 Uniprot:Q06A99
Length = 491
Score = 113 (44.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 38/146 (26%), Positives = 65/146 (44%)
Query: 90 NEQRAANTGGGPQDRS-SRWGHEKFEGFSWGKNDSS-SRATGSGRVALEGNPNQSDRREE 147
+ +R + + RS SR H + G + SS S++ R G+ ++S R
Sbjct: 179 SRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSR---SGSRSRSKSRSR 235
Query: 148 KRSIRHDHREKPRE-DHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLR 206
+S +EK R H R DKR + D E + ++ ++ + + P RH+S+S R
Sbjct: 236 SQSRSRSKKEKSRSRSHSRSADKRRSKSKDQAEEKVQNSDNTGKSKSRSPSRHKSKSKSR 295
Query: 207 EDQDRRGGDKSSTGRGDSSSHRHRER 232
RG ++ RG S R +E+
Sbjct: 296 SRSQERGVEEK---RGSGSRSRSKEK 318
Score = 35 (17.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 32 LNGAQILGRTIRVDH 46
LNG + G + V+H
Sbjct: 55 LNGKDLCGERVIVEH 69
>ZFIN|ZDB-GENE-030131-6117 [details] [associations]
symbol:dido1 "death inducer-obliterator 1"
species:7955 "Danio rerio" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR003618 InterPro:IPR017890 InterPro:IPR019787
Pfam:PF00628 Pfam:PF07500 PROSITE:PS50016 PROSITE:PS51321
SMART:SM00249 SMART:SM00510 ZFIN:ZDB-GENE-030131-6117 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.472.30
InterPro:IPR012921 Pfam:PF07744 SUPFAM:SSF46942
GeneTree:ENSGT00530000063844 EMBL:BX296530 EMBL:BX005175
IPI:IPI00971682 Ensembl:ENSDART00000110882 ArrayExpress:F1QQA3
Bgee:F1QQA3 Uniprot:F1QQA3
Length = 2779
Score = 120 (47.3 bits), Expect = 0.00039, P = 0.00039
Identities = 52/173 (30%), Positives = 76/173 (43%)
Query: 75 QRGECTRGDGCKFSHNEQRAANTGGGPQDRS--SRWGHEKFEGFSWGKNDSSSRATGSGR 132
+R C+ DG + SH R + GGP+DR SR E+ S + R G G
Sbjct: 2417 RRRSCSSRDGSE-SHT--RPSRFEGGPRDRDAPSRLSEERQREMSEDRRRDRDREGGHGG 2473
Query: 133 VALEGN-PNQSDR-----REEKRSIRHD----H-REKPREDHGRREDKRSRRHSDNNEFE 181
+ N ++ DR RE RS D H REK RE H + D+ R SD +
Sbjct: 2474 RSWAWNREHEYDRSKERDRERDRSRERDREQGHSREKERE-HSKERDRSRGRESDRGKES 2532
Query: 182 ARSREDHYRRDEKRPKRHE--SESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
R +E ++ +R K E ES ++ DR G +S G+ +S + +R
Sbjct: 2533 DRGKESERGKESERGKESERGKESERGKEFDR--GKESDRGK-ESDRGKESDR 2582
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 117 (46.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 42/116 (36%), Positives = 54/116 (46%)
Query: 119 GKNDSSS-RATGSGRVALEGNPNQSDR-REEKRSIRHDHREKPREDHGRREDKRSRRHSD 176
GKN+ +S R SGR + ++SDR R+ RS R++ R D GR R R SD
Sbjct: 1955 GKNEQNSGRDADSGR-----DRDKSDRDRDYDRSDSRGGRDRDRNDRGRDRSDRDRDRSD 2009
Query: 177 NNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
+ RS D R D R R R D+DR DKS R S +R R+R
Sbjct: 2010 RDR--DRSDRDRDRSDRDRNDRDRD----RNDRDR-DRDKSDRDRDRSDRNRDRDR 2058
Score = 44 (20.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 87 FSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSS 125
FS+ + N GG + ++G +E S+G N S S
Sbjct: 994 FSNASNPSINGSGGGRS-FDKFGGNSYEKPSFGSNGSGS 1031
>UNIPROTKB|F1ST35 [details] [associations]
symbol:RPTN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001751 InterPro:IPR002048 InterPro:IPR011992
PROSITE:PS00303 PROSITE:PS50222 Prosite:PS00018 GO:GO:0005509
Gene3D:1.10.238.10 InterPro:IPR018247 InterPro:IPR013787
Pfam:PF01023 OMA:YGQSGRQ GeneTree:ENSGT00530000063634 EMBL:CU633752
Ensembl:ENSSSCT00000007238 Uniprot:F1ST35
Length = 562
Score = 113 (44.8 bits), Expect = 0.00042, P = 0.00042
Identities = 40/168 (23%), Positives = 76/168 (45%)
Query: 75 QRGECTR-GDGCKFSHNEQRAANTGGGPQDR---SSRWGHE--KFEGFSWGKNDSSSRAT 128
Q G+ R G G + ++++ + G DR SS +GH + +G +G+ D S+++
Sbjct: 383 QYGQTERQGQGSHYGQIDRQSQGSHYGQTDRQGQSSHYGHTDTQGQGSHYGQIDRQSQSS 442
Query: 129 GSGRVALEGNPN---QSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSR 185
G+ +G + Q+DR+ + R+ +G+ + + H E R
Sbjct: 443 HYGQTDRQGQSSHYGQTDRQGQGSHYGQTDRQGQSSHYGQTDRQGQGSHYGQTE---RQE 499
Query: 186 EDHYRRDEKRPKRHESE-SYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
+ +RRD++ HE E + R D+ D++ R D +H +ER
Sbjct: 500 QTRHRRDKQT---HEDEQTRQRRDKQTHEEDQNCQQRQDRQTHEDKER 544
>WB|WBGene00002957 [details] [associations]
symbol:let-858 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007281
"germ cell development" evidence=IMP] [GO:0007369 "gastrulation"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0042078 "germ-line stem cell division" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02854 SMART:SM00543
GO:GO:0009792 GO:GO:0040007 GO:GO:0005654 SUPFAM:SSF48371
GO:GO:0002119 GO:GO:0008380 GO:GO:0003677 GO:GO:0018996
GO:GO:0006397 GO:GO:0005681 GO:GO:0003723 GO:GO:0000790
GO:GO:0007369 Gene3D:1.25.40.180 GO:GO:0042078 EMBL:U19615
EMBL:Z81525 PIR:T21688 RefSeq:NP_496363.1 UniGene:Cel.5489
ProteinModelPortal:Q17336 DIP:DIP-26173N IntAct:Q17336
MINT:MINT-1105983 STRING:Q17336 PaxDb:Q17336
EnsemblMetazoa:F33A8.1.1 EnsemblMetazoa:F33A8.1.2 GeneID:174689
KEGG:cel:CELE_F33A8.1 UCSC:F33A8.1.1 CTD:174689 WormBase:F33A8.1
eggNOG:NOG293831 GeneTree:ENSGT00650000093379 HOGENOM:HOG000212368
InParanoid:Q17336 KO:K13100 OMA:SENFRRK NextBio:885078
GO:GO:0043073 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 Uniprot:Q17336
Length = 897
Score = 115 (45.5 bits), Expect = 0.00045, P = 0.00045
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 121 NDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRRE--DKRSRRHSDNN 178
+D SS ++ + E P ++++K S ++K +E+ GRR+ DKR+ RH D +
Sbjct: 715 SDDSSDSSSDSSSSSESEPEPPKKKKKKNS-EESSKKKEKENIGRRDRGDKRAERHRDQS 773
Query: 179 -EFEARSREDHYRRDE-KRPKRHESESYLREDQDRRGGD----KSSTGRGDSSSHRHRER 232
E + + R DE +RP+R + +D+ R+ D K R DS R +R
Sbjct: 774 VENKDKDRRRRQDSDENRRPERGDDRKDRSKDRRRQDSDDEDRKGRERREDSGERRRGDR 833
>UNIPROTKB|Q17336 [details] [associations]
symbol:let-858 "Pre-mRNA-splicing factor CWC22 homolog"
species:6239 "Caenorhabditis elegans" [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
InterPro:IPR003890 InterPro:IPR016021 InterPro:IPR016024
Pfam:PF02854 SMART:SM00543 GO:GO:0009792 GO:GO:0040007
GO:GO:0005654 SUPFAM:SSF48371 GO:GO:0002119 GO:GO:0008380
GO:GO:0003677 GO:GO:0018996 GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0000790 GO:GO:0007369 Gene3D:1.25.40.180
GO:GO:0042078 EMBL:U19615 EMBL:Z81525 PIR:T21688 RefSeq:NP_496363.1
UniGene:Cel.5489 ProteinModelPortal:Q17336 DIP:DIP-26173N
IntAct:Q17336 MINT:MINT-1105983 STRING:Q17336 PaxDb:Q17336
EnsemblMetazoa:F33A8.1.1 EnsemblMetazoa:F33A8.1.2 GeneID:174689
KEGG:cel:CELE_F33A8.1 UCSC:F33A8.1.1 CTD:174689 WormBase:F33A8.1
eggNOG:NOG293831 GeneTree:ENSGT00650000093379 HOGENOM:HOG000212368
InParanoid:Q17336 KO:K13100 OMA:SENFRRK NextBio:885078
GO:GO:0043073 InterPro:IPR003891 Pfam:PF02847 SMART:SM00544
PROSITE:PS51366 Uniprot:Q17336
Length = 897
Score = 115 (45.5 bits), Expect = 0.00045, P = 0.00045
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 121 NDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRRE--DKRSRRHSDNN 178
+D SS ++ + E P ++++K S ++K +E+ GRR+ DKR+ RH D +
Sbjct: 715 SDDSSDSSSDSSSSSESEPEPPKKKKKKNS-EESSKKKEKENIGRRDRGDKRAERHRDQS 773
Query: 179 -EFEARSREDHYRRDE-KRPKRHESESYLREDQDRRGGD----KSSTGRGDSSSHRHRER 232
E + + R DE +RP+R + +D+ R+ D K R DS R +R
Sbjct: 774 VENKDKDRRRRQDSDENRRPERGDDRKDRSKDRRRQDSDDEDRKGRERREDSGERRRGDR 833
>UNIPROTKB|E2RSE4 [details] [associations]
symbol:PPIG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072 GO:GO:0006457
GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413
GeneTree:ENSGT00550000074595 EMBL:AAEX03017743
Ensembl:ENSCAFT00000019654 Uniprot:E2RSE4
Length = 738
Score = 114 (45.2 bits), Expect = 0.00046, P = 0.00046
Identities = 38/150 (25%), Positives = 60/150 (40%)
Query: 89 HNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEK 148
HN ++R EK + S GK+ SR+ + LE N+ D + K
Sbjct: 463 HNRHEEKRMRSRSKERDHEIIKEKEKSDSKGKDQERSRSKEKSK-QLESKSNEHDHNKSK 521
Query: 149 RSIRH-DHREKPRED-HGRRE-DKRSRRHSDNNEFEARSREDHYRRDEKRPK---RHESE 202
R R + R+ G+ + R+R S + + R R + RD R K R+ +
Sbjct: 522 EKDRRAQSRSRERDTTKGKHSYNSRTRERSRSRDRSRRVRSRSHDRDRSRSKDYHRYREQ 581
Query: 203 SYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
Y R + R +++ GR S R R R
Sbjct: 582 EYRRRGRSRSRERRATPGRSRSKDRRRRRR 611
>UNIPROTKB|G4NEX9 [details] [associations]
symbol:MGG_00716 "Microfibril-associated protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR009730 EMBL:CM001235 KO:K13110
PANTHER:PTHR15327 Pfam:PF06991 RefSeq:XP_003718289.1
EnsemblFungi:MGG_00716T0 GeneID:2674856 KEGG:mgr:MGG_00716
Uniprot:G4NEX9
Length = 489
Score = 112 (44.5 bits), Expect = 0.00046, P = 0.00046
Identities = 49/168 (29%), Positives = 73/168 (43%)
Query: 72 RAFQRGECTR-GDGCKFSHNEQRAANTG----GGPQDRSSRWGHEKFEGFSWGKNDSSSR 126
+A Q + T+ G + + R+ +TG G +DR R ++F+G + D+ R
Sbjct: 324 QALQMRDMTKLGKKGATRYKDLRSEDTGRWGDSGGKDRYGRGLGDRFDGDERFRPDND-R 382
Query: 127 ATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSRE 186
G G +G N E K R D ++ R D R D++S R + + R+
Sbjct: 383 GGGYGPDGAKG-ANAIPLGERKEDSRRDRYQESRRDDSRDRDRKSYRTRSRSR--SPRRQ 439
Query: 187 DHYRRDEKRPKRHESESYLREDQD-RRGGDKSSTGRGD-SSSHRHRER 232
D RRD R RH S S R+ +D R K ST RG H + R
Sbjct: 440 D--RRDYDRD-RHTSRSPRRDRRDYSRERRKRSTSRGGRDGDHGDKRR 484
>TAIR|locus:2087347 [details] [associations]
symbol:AT3G25840 species:3702 "Arabidopsis thaliana"
[GO:0004672 "protein kinase activity" evidence=IEA;ISS] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006468
"protein phosphorylation" evidence=IEA;ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 SUPFAM:SSF56112 GO:GO:0004674 HSSP:Q00534 KO:K08827
HOGENOM:HOG000197082 EMBL:AY092978 EMBL:AY128789 IPI:IPI00527177
RefSeq:NP_189213.2 UniGene:At.26477 UniGene:At.37317
ProteinModelPortal:Q8RWN3 SMR:Q8RWN3 PRIDE:Q8RWN3
EnsemblPlants:AT3G25840.1 GeneID:822178 KEGG:ath:AT3G25840
TAIR:At3g25840 InParanoid:Q8RWN3 OMA:RTEERYH PhylomeDB:Q8RWN3
ProtClustDB:CLSN2917954 ArrayExpress:Q8RWN3 Genevestigator:Q8RWN3
Uniprot:Q8RWN3
Length = 935
Score = 115 (45.5 bits), Expect = 0.00047, P = 0.00047
Identities = 46/153 (30%), Positives = 69/153 (45%)
Query: 91 EQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRS 150
++R GGP +R S+ ++ G S + S+SR + GR + ++S RE + S
Sbjct: 146 DKRWDKEAGGPSERVSKLSYDN--GRS-SFSPSNSRQSNEGRAR---SRSKSHDRERETS 199
Query: 151 IRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRD--EKRPKRHESESYLRE- 207
R E D GR D H D + R+ E ++RR E+ +++ E R+
Sbjct: 200 -RSRFAEDEFSDRGRHHDSSRDYHHDRVD-SVRTEERYHRRGRYEENDRQYSREVLERDR 257
Query: 208 ----DQDRRGG--DKSSTG--RGDSSSHRHRER 232
D DR G D+ S G R D S R RER
Sbjct: 258 SKERDMDREGSIRDRDSEGSKRRDKDSDRRRER 290
>UNIPROTKB|J9PAE8 [details] [associations]
symbol:PPIG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072 GO:GO:0006457
GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413
GeneTree:ENSGT00550000074595 KO:K09566 CTD:9360 OMA:NKKFDHE
EMBL:AAEX03017743 RefSeq:XP_849611.1 Ensembl:ENSCAFT00000044329
GeneID:607519 KEGG:cfa:607519 Uniprot:J9PAE8
Length = 753
Score = 114 (45.2 bits), Expect = 0.00047, P = 0.00047
Identities = 38/150 (25%), Positives = 60/150 (40%)
Query: 89 HNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEK 148
HN ++R EK + S GK+ SR+ + LE N+ D + K
Sbjct: 478 HNRHEEKRMRSRSKERDHEIIKEKEKSDSKGKDQERSRSKEKSK-QLESKSNEHDHNKSK 536
Query: 149 RSIRH-DHREKPRED-HGRRE-DKRSRRHSDNNEFEARSREDHYRRDEKRPK---RHESE 202
R R + R+ G+ + R+R S + + R R + RD R K R+ +
Sbjct: 537 EKDRRAQSRSRERDTTKGKHSYNSRTRERSRSRDRSRRVRSRSHDRDRSRSKDYHRYREQ 596
Query: 203 SYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
Y R + R +++ GR S R R R
Sbjct: 597 EYRRRGRSRSRERRATPGRSRSKDRRRRRR 626
>UNIPROTKB|J9P1V6 [details] [associations]
symbol:J9P1V6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000786 "nucleosome"
evidence=IEA] InterPro:IPR005819 PRINTS:PR00624 GO:GO:0003677
GO:GO:0006334 GO:GO:0000786 GeneTree:ENSGT00700000104356
EMBL:AAEX03010240 Ensembl:ENSCAFT00000047113 OMA:PRANTHR
Uniprot:J9P1V6
Length = 202
Score = 105 (42.0 bits), Expect = 0.00054, P = 0.00054
Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 129 GSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDH 188
G GR +G + RREEKR RE+ R + RRE+KR +R + E R +E
Sbjct: 51 GKGREG-KGRKEKKKRREEKR------REEKRREEKRREEKRKKRREEKRREEKR-KERK 102
Query: 189 YRRDEKRPKRHESESYL-REDQDRRGGDKSSTGRGDSSSHRHRER 232
R+++KR ++ E + R+++ + +K + + ++R
Sbjct: 103 KRKEKKRKEKKEKKKRKERKEKKEKKREKRKEKKRKEKKRKEKKR 147
Score = 103 (41.3 bits), Expect = 0.00097, P = 0.00097
Identities = 25/92 (27%), Positives = 52/92 (56%)
Query: 141 QSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRP--KR 198
+ RREEKR R +EK R++ ++E K+ + + E + R++ R+++KR KR
Sbjct: 90 EEKRREEKRKERKKRKEKKRKE--KKEKKKRKERKEKKEKKREKRKEKKRKEKKRKEKKR 147
Query: 199 HESESYLREDQDRRGGDKSSTGRGDSSSHRHR 230
E + ++ ++++ +K + R +++HR R
Sbjct: 148 KEKKRKEKKRKEKKRKEKKISPR--ANTHRKR 177
>UNIPROTKB|Q9H0G5 [details] [associations]
symbol:NSRP1 "Nuclear speckle splicing regulatory protein
1" species:9606 "Homo sapiens" [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0003729 "mRNA binding" evidence=IDA] [GO:0006913
"nucleocytoplasmic transport" evidence=IDA] [GO:0016607 "nuclear
speck" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0032502
"developmental process" evidence=IMP] GO:GO:0008380 GO:GO:0016607
GO:GO:0003729 GO:GO:0006397 GO:GO:0006913 GO:GO:0030529
GO:GO:0032502 GO:GO:0000381 EMBL:AC104984 CTD:84081
eggNOG:NOG310283 HOVERGEN:HBG081043 KO:K13206 OrthoDB:EOG43XV3P
InterPro:IPR018612 Pfam:PF09745 EMBL:AL136806 EMBL:CR533555
EMBL:BC040118 EMBL:BC105044 EMBL:BC105046 IPI:IPI00030274
RefSeq:NP_001248396.1 RefSeq:NP_115517.1 UniGene:Hs.462663
ProteinModelPortal:Q9H0G5 PhosphoSite:Q9H0G5 DMDM:74733524
PaxDb:Q9H0G5 PRIDE:Q9H0G5 DNASU:84081 Ensembl:ENST00000247026
GeneID:84081 KEGG:hsa:84081 UCSC:uc002heu.3 GeneCards:GC17P028445
HGNC:HGNC:25305 HPA:HPA015593 HPA:HPA015603 neXtProt:NX_Q9H0G5
PharmGKB:PA142672171 OMA:NDKYRDR PhylomeDB:Q9H0G5 GenomeRNAi:84081
NextBio:73307 ArrayExpress:Q9H0G5 Bgee:Q9H0G5 CleanEx:HS_CCDC55
Genevestigator:Q9H0G5 Uniprot:Q9H0G5
Length = 558
Score = 112 (44.5 bits), Expect = 0.00056, P = 0.00056
Identities = 38/155 (24%), Positives = 68/155 (43%)
Query: 80 TRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKF--EGFSWGKNDSSSRATGSGRVALEG 137
T+G H ++ + +D+ + + + E S ++S R + R E
Sbjct: 304 TKGSRTSRGHEKREDQHQQKQSRDQENHYTDRDYRKERDSHRHREASHRDSHWKRHEQED 363
Query: 138 NPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPK 197
P D+RE RS R REK RE + +RE +R R+ +D N + ++ + ++
Sbjct: 364 KPRARDQRE--RSDRVWKREKDREKYSQREQERDRQQNDQNRPSEKGEKEEKSKAKEEHM 421
Query: 198 RHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
+ E Y D+ R D+ G SS R+++R
Sbjct: 422 KVRKERYENNDKYR---DREKREVGVQSSERNQDR 453
>UNIPROTKB|H0YA81 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0005925 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 HGNC:HGNC:24309 ChiTaRS:LUC7L3
EMBL:AC005921 Ensembl:ENST00000504065 Bgee:H0YA81 Uniprot:H0YA81
Length = 207
Score = 105 (42.0 bits), Expect = 0.00058, P = 0.00058
Identities = 34/103 (33%), Positives = 49/103 (47%)
Query: 141 QSDRREEKRSIRHDHREKPR-EDHGRREDKRSR-RHSDNNEFEARSRE-DHYR---RDEK 194
+ + RE KR + REK R D RR+ RSR RHS SR DH R R+ +
Sbjct: 84 EREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERR 143
Query: 195 RPK---RHESESYLREDQDRRGG--DKSSTGRGDSSSHRHRER 232
R + R S S+ R ++ R D+ + D S++HR +
Sbjct: 144 RSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSK 186
>UNIPROTKB|I3LF64 [details] [associations]
symbol:ZRSR2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
PANTHER:PTHR12620 GeneTree:ENSGT00530000063193 OMA:EDAFIEE
EMBL:FP102132 Ensembl:ENSSSCT00000028847 Uniprot:I3LF64
Length = 479
Score = 111 (44.1 bits), Expect = 0.00059, P = 0.00059
Identities = 45/163 (27%), Positives = 60/163 (36%)
Query: 70 VCRAFQRGECTRGDGCKFSH------NEQRAANTGG--GPQDRSSRWGHEKFEGFSWGKN 121
+C F+ +C RG C F H NE AN P S +G G++
Sbjct: 318 ICGLFEIQQCPRGKHCNFLHVFRNPNNEFWEANRDIYLSPDRTGSSFGKNSERRERPGRH 377
Query: 122 DSSS----RATGSGRVALEGNPNQSDRREEKRSIR-HDHREKPREDHGRREDKRSRRHSD 176
+ S R+ G R + RR + + H HR K RE H R R R S
Sbjct: 378 EYSRLRRRRSPGPARSYKRNGEAERKRRGSHGAKKSHKHRSKSRERHSSRSRGRKRDRSR 437
Query: 177 NNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSST 219
+RSR R + R +S S R RR G + T
Sbjct: 438 GRGSRSRSRSRRSRSHSR--SRSQSSSRSRSRGGRRSGSRDRT 478
>UNIPROTKB|G4N9S1 [details] [associations]
symbol:MGG_10681 "Peptidyl-prolyl cis-trans isomerase-like
4" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000504 InterPro:IPR002130
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00160 PRINTS:PR00153
PROSITE:PS50072 PROSITE:PS50102 SMART:SM00360 GO:GO:0006457
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0043581
EMBL:CM001234 GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413 KO:K12735
RefSeq:XP_003715897.1 EnsemblFungi:MGG_10681T0 GeneID:2682882
KEGG:mgr:MGG_10681 Uniprot:G4N9S1
Length = 505
Score = 111 (44.1 bits), Expect = 0.00064, P = 0.00064
Identities = 47/143 (32%), Positives = 60/143 (41%)
Query: 91 EQRAANTGG-GPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRRE-EK 148
+Q A GG G D +W K+ G++D R G V G R E +K
Sbjct: 353 KQAAKGRGGWGGVDELEKW--RKYREDD-GRDD---RPDSYGMVY--GKEEMQGRHERQK 404
Query: 149 RSIRHDHREKPREDHGRRE--DKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLR 206
HD EKPRE G R D+R R SD+ RSR RR+ R R R
Sbjct: 405 AGPGHD-AEKPREGGGDRNGYDQRRDRASDSRR---RSRSRSPRRERHRDSRDGRRRDDR 460
Query: 207 EDQDRRGGDKSSTGRGDSSSHRH 229
+ +RGG++S R D RH
Sbjct: 461 DSGSKRGGERSRHDR-DRGQERH 482
>UNIPROTKB|B4DJ96 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0005925 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 UniGene:Hs.130293 HGNC:HGNC:24309
ChiTaRS:LUC7L3 EMBL:AC005921 EMBL:AK295983 IPI:IPI00966213
STRING:B4DJ96 Ensembl:ENST00000544170 UCSC:uc010wmw.2
Uniprot:B4DJ96
Length = 356
Score = 109 (43.4 bits), Expect = 0.00065, P = 0.00065
Identities = 33/91 (36%), Positives = 45/91 (49%)
Query: 142 SDRREEKRSIR-HDH-REKPREDH-GRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR 198
S R ++R R DH R + RE R D+R R D +E + RSR RR + R ++
Sbjct: 224 SSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRK 283
Query: 199 ---HESESYLREDQDRRGGDKSSTGRGDSSS 226
H S+S RE QDR+ +K G D S
Sbjct: 284 SYKHRSKSRDRE-QDRKSKEKEKRGSDDKKS 313
>UNIPROTKB|F8VVA2 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
GO:GO:0005739 GO:GO:0005886 GO:GO:0005634 HGNC:HGNC:17347
EMBL:AC117498 IPI:IPI01020999 Ensembl:ENST00000552512
ArrayExpress:F8VVA2 Bgee:F8VVA2 Uniprot:F8VVA2
Length = 182
Score = 103 (41.3 bits), Expect = 0.00066, P = 0.00066
Identities = 29/90 (32%), Positives = 38/90 (42%)
Query: 143 DRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESE 202
DR+ R HR + R G R RSR S E + RE RD + R +
Sbjct: 35 DRKSSPSKDRKRHRSRDRRRGGSRSRSRSRSKSAERERRHKERERDKERDRNKKDRDRDK 94
Query: 203 SYLREDQDRRGGDKSSTGRG-DSSSHRHRE 231
R D+DR+ S GRG D S + R+
Sbjct: 95 DGHRRDKDRKRSSLSP-GRGKDFKSRKDRD 123
>UNIPROTKB|G4MZ88 [details] [associations]
symbol:MGG_08192 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CM001232
RefSeq:XP_003715168.1 EnsemblFungi:MGG_08192T0 GeneID:2678427
KEGG:mgr:MGG_08192 Uniprot:G4MZ88
Length = 1038
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00070
Identities = 43/150 (28%), Positives = 64/150 (42%)
Query: 83 DGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQS 142
D + S N G DR S +++ + +N S R+ G R G+P +S
Sbjct: 353 DSPRRSANNIEVPRPSRGYSDRRSEKKYDESSPRTSRRNISPPRSDGRSRYYGGGSPPRS 412
Query: 143 DRREEK-RSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHES 201
DRR RS R E R D RR SRR+S+ R R+ R+ +R + +
Sbjct: 413 DRRSSPTRSERSVRSE--RSD--RRRSPPSRRYSERERDRERDRDRDRDRERERERVRDR 468
Query: 202 ESYLREDQDRRGGDKSSTGRGDSSSHRHRE 231
E+ R D+ R +S + + SSH E
Sbjct: 469 ENRNR-DRTREPPSRSDSYKSQRSSHNSDE 497
>TAIR|locus:2165447 [details] [associations]
symbol:U2AF35B species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0048573
"photoperiodism, flowering" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR000504 InterPro:IPR000571 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00642 PRINTS:PR01848
PROSITE:PS50102 PROSITE:PS50103 SMART:SM00356 SMART:SM00360
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008380
GO:GO:0000166 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0048573
EMBL:AB008264 EMBL:AB007647 HSSP:Q01081 PANTHER:PTHR12620
UniGene:At.8456 eggNOG:NOG323920 HOGENOM:HOG000178619 KO:K12836
OMA:SERHDRD ProtClustDB:CLSN2686618 EMBL:AF409140 EMBL:AY136436
EMBL:BT000219 IPI:IPI00531951 RefSeq:NP_199096.1 RefSeq:NP_974870.1
UniGene:At.25814 ProteinModelPortal:Q9FMY5 SMR:Q9FMY5 IntAct:Q9FMY5
STRING:Q9FMY5 PaxDb:Q9FMY5 PRIDE:Q9FMY5 EnsemblPlants:AT5G42820.1
EnsemblPlants:AT5G42820.2 GeneID:834293 KEGG:ath:AT5G42820
GeneFarm:4540 TAIR:At5g42820 InParanoid:Q9FMY5 PhylomeDB:Q9FMY5
Genevestigator:Q9FMY5 Uniprot:Q9FMY5
Length = 283
Score = 107 (42.7 bits), Expect = 0.00072, P = 0.00072
Identities = 35/126 (27%), Positives = 52/126 (41%)
Query: 71 CRAFQRGECTRGDGCKFSHNEQRAANTGG---GPQDRSSRWG-HEKFEGFSWGKNDSSSR 126
CR ++ C RG C F H +Q + G RS R G + S + SR
Sbjct: 154 CRQYEENSCNRGGYCNFMHVKQISRELRRKLFGRYRRSYRRGSRSRSRSISPRRKREHSR 213
Query: 127 ATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSRE 186
G V + + + + +R RS RHD R HG + RS R+ E R+R
Sbjct: 214 ERERGDVR-DRDRHGNGKRSSDRSERHDRDGGGRRRHGSPKRSRSPRNVREGSEERRARI 272
Query: 187 DHYRRD 192
+ + R+
Sbjct: 273 EQWNRE 278
>UNIPROTKB|J9NS11 [details] [associations]
symbol:ZC3H18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00650000093061 EMBL:AAEX03003971 EMBL:AAEX03003972
Ensembl:ENSCAFT00000050086 Uniprot:J9NS11
Length = 947
Score = 93 (37.8 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 153 HDHREKPRE-DHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHE--SESYLREDQ 209
H++RE+ RE + R+ +R R + E E R RE R+ +R K + E + RE
Sbjct: 393 HNYRERERERERENRQRERERERERDRERERRQRERERERERERDKERQRRKEEWERERA 452
Query: 210 DRRGGDKSSTGRGDSSSHRHRER 232
R D+ R D R +E+
Sbjct: 453 KRDDKDRQHRDR-DREKEREKEK 474
Score = 63 (27.2 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 71 CRAFQRGECTRGDGCKFSH 89
CR F +G CT G C+F H
Sbjct: 218 CRFFMKGNCTWGMNCRFIH 236
>DICTYBASE|DDB_G0279535 [details] [associations]
symbol:DDB_G0279535 "DUF1777 family protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0279535 EMBL:AAFI02000031 eggNOG:NOG137437
InterPro:IPR013957 Pfam:PF08648 OMA:FRSTKNT RefSeq:XP_641685.2
EnsemblProtists:DDB0238807 GeneID:8622093 KEGG:ddi:DDB_G0279535
Uniprot:Q54WN2
Length = 296
Score = 107 (42.7 bits), Expect = 0.00079, P = 0.00079
Identities = 39/119 (32%), Positives = 54/119 (45%)
Query: 102 QDRSS-RWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPR 160
+DR R GH +G G D R + N+S R+ R + +HR+ R
Sbjct: 88 RDRDGYRDGHR--DGHRDGHRDRDRDRDNRNR---DLRDNRSSNRDFNR--KDNHRDNDR 140
Query: 161 EDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRR-GGDKSS 218
D+ RR++ R R HS + +RSRE RD KR + H +DRR GGD S
Sbjct: 141 RDNDRRDNGR-RSHSRSRS-RSRSRE----RDRKRQRDHSRSRSRSRSRDRRDGGDNGS 193
>UNIPROTKB|E2QSN7 [details] [associations]
symbol:ZC3H18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
PROSITE:PS50103 SMART:SM00356 GO:GO:0008270 GO:GO:0003676
Ensembl:ENSCAFT00000031642 Uniprot:E2QSN7
Length = 950
Score = 93 (37.8 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 153 HDHREKPRE-DHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHE--SESYLREDQ 209
H++RE+ RE + R+ +R R + E E R RE R+ +R K + E + RE
Sbjct: 393 HNYRERERERERENRQRERERERERDRERERRQRERERERERERDKERQRRKEEWERERA 452
Query: 210 DRRGGDKSSTGRGDSSSHRHRER 232
R D+ R D R +E+
Sbjct: 453 KRDDKDRQHRDR-DREKEREKEK 474
Score = 63 (27.2 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 71 CRAFQRGECTRGDGCKFSH 89
CR F +G CT G C+F H
Sbjct: 218 CRFFMKGNCTWGMNCRFIH 236
>DICTYBASE|DDB_G0267796 [details] [associations]
symbol:DDB_G0267796 "initiation factor eIF-4 gamma,
MA3 domain-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0016070 "RNA metabolic process" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003890
InterPro:IPR016021 InterPro:IPR016024 Pfam:PF02854 SMART:SM00543
dictyBase:DDB_G0267796 SUPFAM:SSF48371 GO:GO:0003677
EMBL:AAFI02000003 GO:GO:0005681 GO:GO:0003743 GO:GO:0000398
Gene3D:1.25.40.180 eggNOG:NOG293831 KO:K13100 InterPro:IPR003891
Pfam:PF02847 SMART:SM00544 PROSITE:PS51366 OMA:VENEERY
RefSeq:XP_647313.1 ProteinModelPortal:Q55G70 STRING:Q55G70
EnsemblProtists:DDB0233565 GeneID:8616124 KEGG:ddi:DDB_G0267796
InParanoid:Q55G70 Uniprot:Q55G70
Length = 925
Score = 113 (44.8 bits), Expect = 0.00080, P = 0.00080
Identities = 49/155 (31%), Positives = 69/155 (44%)
Query: 83 DGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQS 142
DG SH QR ++ R R + ++ S + S SR+ R + N+
Sbjct: 5 DGEIISHQYQRGRDSEY--DSRRERDYKDSYDNKSKDRERSKSRSRSRDR-----DRNRY 57
Query: 143 DRREEKRSIRHDHREKPREDHGRREDK-RSR-RHSDNNEFEARSRE-DHYR-RDEKRPKR 198
DR E R + + RE+ R DH R D+ R R R+ D + R+R+ D R RD R +
Sbjct: 58 DRDRE-RDLEKE-RERDR-DHDRNRDRDRDRDRNRDRDRDHDRNRDRDRNRDRDHDRDRD 114
Query: 199 HESESYLREDQDR-RGGDKSSTGRGDSSSHRHRER 232
E E D+DR R G+K D R RER
Sbjct: 115 REREKDRERDRDRDRYGNKERDRDRDRERDRDRER 149
>UNIPROTKB|E1BXC5 [details] [associations]
symbol:ZC3H13 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00700000104144 OMA:RSNRSHT
EMBL:AADN02005441 EMBL:AADN02005442 EMBL:AADN02005443
IPI:IPI00572738 Ensembl:ENSGALT00000027439 Uniprot:E1BXC5
Length = 1588
Score = 115 (45.5 bits), Expect = 0.00087, P = 0.00087
Identities = 44/166 (26%), Positives = 70/166 (42%)
Query: 80 TRGDGCKFSHNEQRAANTGGGPQDRSSRWG--HEKFEGFSW----GKNDSSSRATGSGRV 133
+RG G + S R T G D S G H+ +E S + DS +A S
Sbjct: 566 SRGRGPELSDKGSRG--TRGSQVDGHSSSGNYHDSWESRSSYPDRDRYDSRDQARDSSFE 623
Query: 134 ALEGNPNQSDRRE-EKRS---IRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHY 189
G ++ D RE ++R+ +RH R E RR+++R R D + AR RE
Sbjct: 624 RRHGERDRRDNRERDQRASSPVRHQGRSDDLERDERRDERRVDRSDDRRDERARERERER 683
Query: 190 RRDEKRPKRHESESYLREDQDR---RGGDKSSTGRGDSSSHRHRER 232
RD +R + + E ++++ R ++ D R R+R
Sbjct: 684 ERDRERERERDREREREKERELERDRARERERERERDKDRDRERDR 729
>UNIPROTKB|Q3SX41 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9913 "Bos
taurus" [GO:0008380 "RNA splicing" evidence=ISS] [GO:0006950
"response to stress" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0006915 GO:GO:0006950
GO:GO:0008380 GO:GO:0003677 GO:GO:0016607 GO:GO:0003729
GO:GO:0006397 GO:GO:0005925 eggNOG:COG5200 HOVERGEN:HBG062167
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
GeneTree:ENSGT00700000104035 HOGENOM:HOG000215956 EMBL:BC104519
IPI:IPI00715642 RefSeq:NP_001029856.1 UniGene:Bt.1595 STRING:Q3SX41
PRIDE:Q3SX41 Ensembl:ENSBTAT00000002938 GeneID:539955
KEGG:bta:539955 CTD:51747 InParanoid:Q3SX41 OMA:ISVPLWK
OrthoDB:EOG4QJRNZ NextBio:20878323 Uniprot:Q3SX41
Length = 432
Score = 109 (43.4 bits), Expect = 0.00088, P = 0.00088
Identities = 33/91 (36%), Positives = 45/91 (49%)
Query: 142 SDRREEKRSIR-HDH-REKPREDH-GRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR 198
S R ++R R DH R + RE R D+R R D +E + RSR RR + R ++
Sbjct: 300 SSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRK 359
Query: 199 ---HESESYLREDQDRRGGDKSSTGRGDSSS 226
H S+S RE QDR+ +K G D S
Sbjct: 360 SYKHRSKSRDRE-QDRKSKEKEKRGSDDKKS 389
>UNIPROTKB|O95232 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0006950 "response to stress" evidence=IMP] [GO:0008380 "RNA
splicing" evidence=IMP] [GO:0003729 "mRNA binding" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0006915 GO:GO:0006950
GO:GO:0008380 GO:GO:0003677 GO:GO:0016607 GO:GO:0003729
GO:GO:0006397 GO:GO:0005925 EMBL:CH471109 eggNOG:COG5200
HOVERGEN:HBG062167 InterPro:IPR004882 PANTHER:PTHR12375
Pfam:PF03194 HOGENOM:HOG000215956 CTD:51747 OrthoDB:EOG4QJRNZ
EMBL:AB034205 EMBL:DQ013876 EMBL:AK001925 EMBL:AK023672
EMBL:BC056409 EMBL:AF069250 IPI:IPI00107745 IPI:IPI00448519
RefSeq:NP_006098.2 RefSeq:NP_057508.2 UniGene:Hs.130293
ProteinModelPortal:O95232 IntAct:O95232 MINT:MINT-1683180
STRING:O95232 PhosphoSite:O95232 PaxDb:O95232 PeptideAtlas:O95232
PRIDE:O95232 DNASU:51747 Ensembl:ENST00000240304
Ensembl:ENST00000505658 GeneID:51747 KEGG:hsa:51747 UCSC:uc002isq.3
GeneCards:GC17P048796 HGNC:HGNC:24309 HPA:HPA018475 HPA:HPA018484
HPA:HPA020017 MIM:609434 neXtProt:NX_O95232 PharmGKB:PA165432062
InParanoid:O95232 ChiTaRS:LUC7L3 GenomeRNAi:51747 NextBio:55830
ArrayExpress:O95232 Bgee:O95232 Genevestigator:O95232
GermOnline:ENSG00000108848 Uniprot:O95232
Length = 432
Score = 109 (43.4 bits), Expect = 0.00088, P = 0.00088
Identities = 33/91 (36%), Positives = 45/91 (49%)
Query: 142 SDRREEKRSIR-HDH-REKPREDH-GRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR 198
S R ++R R DH R + RE R D+R R D +E + RSR RR + R ++
Sbjct: 300 SSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRK 359
Query: 199 ---HESESYLREDQDRRGGDKSSTGRGDSSS 226
H S+S RE QDR+ +K G D S
Sbjct: 360 SYKHRSKSRDRE-QDRKSKEKEKRGSDDKKS 389
>UNIPROTKB|Q5R8W6 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9601 "Pongo
abelii" [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006915 "apoptotic process"
evidence=ISS] [GO:0006950 "response to stress" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] GO:GO:0005634
GO:GO:0006915 GO:GO:0006950 GO:GO:0008380 GO:GO:0003677
GO:GO:0016607 GO:GO:0003729 GO:GO:0006397 HOVERGEN:HBG062167
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194 CTD:51747
EMBL:CR859632 RefSeq:NP_001126042.1 UniGene:Pab.18951
ProteinModelPortal:Q5R8W6 PRIDE:Q5R8W6 GeneID:100172991
KEGG:pon:100172991 InParanoid:Q5R8W6 Uniprot:Q5R8W6
Length = 432
Score = 109 (43.4 bits), Expect = 0.00088, P = 0.00088
Identities = 33/91 (36%), Positives = 45/91 (49%)
Query: 142 SDRREEKRSIR-HDH-REKPREDH-GRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKR 198
S R ++R R DH R + RE R D+R R D +E + RSR RR + R ++
Sbjct: 300 SSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRK 359
Query: 199 ---HESESYLREDQDRRGGDKSSTGRGDSSS 226
H S+S RE QDR+ +K G D S
Sbjct: 360 SYKHRSKSRDRE-QDRKSKEKEKRGSDDKKS 389
>MGI|MGI:1914934 [details] [associations]
symbol:Luc7l3 "LUC7-like 3 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0006950 "response to stress"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO]
MGI:MGI:1914934 GO:GO:0005886 GO:GO:0005634 GO:GO:0006915
GO:GO:0006950 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0003729 GO:GO:0006397 GO:GO:0005925 EMBL:AL645965
eggNOG:COG5200 HOVERGEN:HBG062167 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 GeneTree:ENSGT00700000104035
HOGENOM:HOG000215956 CTD:51747 OMA:ISVPLWK OrthoDB:EOG4QJRNZ
ChiTaRS:LUC7L3 EMBL:AK014362 EMBL:AK019464 EMBL:AK084714
EMBL:AK151228 EMBL:AK151839 EMBL:AL645846 EMBL:BC009092
IPI:IPI00122418 IPI:IPI00649422 IPI:IPI00752942 RefSeq:NP_080589.1
UniGene:Mm.30927 ProteinModelPortal:Q5SUF2 IntAct:Q5SUF2
STRING:Q5SUF2 PhosphoSite:Q5SUF2 PaxDb:Q5SUF2 PRIDE:Q5SUF2
Ensembl:ENSMUST00000021226 Ensembl:ENSMUST00000107820
Ensembl:ENSMUST00000107821 Ensembl:ENSMUST00000166312 GeneID:67684
KEGG:mmu:67684 UCSC:uc007kyh.1 UCSC:uc007kyi.1 UCSC:uc007kyj.1
NextBio:325251 Bgee:Q5SUF2 CleanEx:MM_3300001P08RIK
Genevestigator:Q5SUF2 GermOnline:ENSMUSG00000020863 Uniprot:Q5SUF2
Length = 432
Score = 109 (43.4 bits), Expect = 0.00088, P = 0.00088
Identities = 35/103 (33%), Positives = 49/103 (47%)
Query: 141 QSDRREEKRSIRHDHREKPR-EDHGRREDKRSR-RHSDNNEFEARSRE-DHYR---RDEK 194
+ + RE KR + REK R D RR+ RSR RHS SR DH R RD +
Sbjct: 264 EREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRDRR 323
Query: 195 RPK---RHESESYLREDQDRRGG--DKSSTGRGDSSSHRHRER 232
R + R S S+ R ++ R D+ + D S++HR +
Sbjct: 324 RSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSK 366
>UNIPROTKB|P08621 [details] [associations]
symbol:SNRNP70 "U1 small nuclear ribonucleoprotein 70 kDa"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003723 "RNA binding"
evidence=IMP] [GO:0043484 "regulation of RNA splicing"
evidence=IMP] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0006397 "mRNA processing" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005654 GO:GO:0000166 GO:GO:0016607 Reactome:REACT_1675
Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003723 EMBL:CH471177
GO:GO:0043484 GO:GO:0000398 eggNOG:COG0724 PDB:3CW1 PDB:3PGW
PDBsum:3CW1 PDBsum:3PGW KO:K11093 OMA:KKSRGYL InterPro:IPR022023
Pfam:PF12220 CTD:6625 OrthoDB:EOG4CJVJ7 EMBL:X04654 EMBL:X06814
EMBL:X06815 EMBL:X06817 EMBL:X07402 EMBL:X06816 EMBL:X06812
EMBL:X06811 EMBL:X07401 EMBL:X07403 EMBL:M22636 EMBL:M57939
EMBL:M57929 EMBL:M57930 EMBL:M57932 EMBL:M57934 EMBL:M57937
EMBL:M57935 EMBL:AK096783 EMBL:X84841 EMBL:AL117507 EMBL:BC001315
IPI:IPI00219483 IPI:IPI00219484 IPI:IPI00219485 IPI:IPI00290204
PIR:A25707 PIR:S00674 RefSeq:NP_003080.2 UniGene:Hs.467097 PDB:2L5I
PDB:2L5J PDBsum:2L5I PDBsum:2L5J ProteinModelPortal:P08621
SMR:P08621 DIP:DIP-29406N IntAct:P08621 MINT:MINT-5004037
STRING:P08621 PhosphoSite:P08621 DMDM:13635663 PaxDb:P08621
PRIDE:P08621 Ensembl:ENST00000221448 Ensembl:ENST00000401730
Ensembl:ENST00000544278 GeneID:6625 KEGG:hsa:6625 UCSC:uc002pmk.3
GeneCards:GC19P049588 HGNC:HGNC:11150 HPA:CAB001718 MIM:180740
neXtProt:NX_P08621 PharmGKB:PA35992 InParanoid:P08621
ChiTaRS:SNRNP70 EvolutionaryTrace:P08621 GenomeRNAi:6625
NextBio:25805 PMAP-CutDB:P08621 ArrayExpress:P08621 Bgee:P08621
Genevestigator:P08621 GermOnline:ENSG00000104852 Uniprot:P08621
Length = 437
Score = 109 (43.4 bits), Expect = 0.00090, P = 0.00090
Identities = 35/106 (33%), Positives = 47/106 (44%)
Query: 119 GKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDH-GRREDKRSRRHSDN 177
G++D+S G L DR E+R R R+K RE R D+R R S +
Sbjct: 212 GRDDTSRYDERPGPSPLPHRDRDRDRERERRE-RSRERDKERERRRSRSRDRRRRSRSRD 270
Query: 178 NEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGD 223
E RSRE +D R KR S S R ++R ++ G GD
Sbjct: 271 KEERRRSRERSKDKDRDR-KRRSSRSRERARRERERKEELRGGGGD 315
>FB|FBgn0027617 [details] [associations]
symbol:CG5808 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0003755 "peptidyl-prolyl cis-trans isomerase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR000504 InterPro:IPR002130
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00160 PRINTS:PR00153
PROSITE:PS50072 PROSITE:PS50102 SMART:SM00360 EMBL:AE014297
GO:GO:0006457 GO:GO:0022008 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
eggNOG:COG0724 GO:GO:0003755 SUPFAM:SSF50891 GO:GO:0000413
GeneTree:ENSGT00670000097658 KO:K12735 EMBL:AF132148
RefSeq:NP_651291.1 UniGene:Dm.3212 HSSP:P14832 SMR:Q9XYZ6
IntAct:Q9XYZ6 MINT:MINT-970905 STRING:Q9XYZ6
EnsemblMetazoa:FBtr0084738 GeneID:42957 KEGG:dme:Dmel_CG5808
UCSC:CG5808-RA FlyBase:FBgn0027617 InParanoid:Q9XYZ6 OMA:SIWGVVE
OrthoDB:EOG49S4P0 GenomeRNAi:42957 NextBio:831514 Uniprot:Q9XYZ6
Length = 653
Score = 111 (44.1 bits), Expect = 0.00090, P = 0.00090
Identities = 39/145 (26%), Positives = 60/145 (41%)
Query: 86 KFSHNEQRAANTGGGPQD---RSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQS 142
++S + R P+D R SR +K S + + R + S R P Q+
Sbjct: 450 RYSRSRDREERRPSRPRDQLGRRSRSRDQKERRRSRPREQNERRRSRS-RDQTGKRPTQN 508
Query: 143 DRREEKRSIRHDHREKPREDH-GRREDKRSRRHSDNNEFEARSREDHYRRDEKRP-KRHE 200
R + R H +E R D RE R++R S ++R+REDH P K HE
Sbjct: 509 RDRNDSRRF-HSPQEGRRNDERSHRETSRNQRRSPERRQQSRNREDHRMDTHSSPNKSHE 567
Query: 201 SESYLREDQDRRGGDKSSTGRGDSS 225
+ L ++ ++ KS SS
Sbjct: 568 KKRKLSVEKSKKQAKKSKRAASSSS 592
>ASPGD|ASPL0000028535 [details] [associations]
symbol:AN5535 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] EMBL:BN001305 EMBL:AACD01000094
InterPro:IPR006768 InterPro:IPR006767 Pfam:PF04677 Pfam:PF04676
eggNOG:NOG248199 HOGENOM:HOG000191634 OrthoDB:EOG4F21BW
RefSeq:XP_663139.1 ProteinModelPortal:Q5B1P5
EnsemblFungi:CADANIAT00003547 GeneID:2871820 KEGG:ani:AN5535.2
OMA:ECDDDEW Uniprot:Q5B1P5
Length = 685
Score = 111 (44.1 bits), Expect = 0.00096, P = 0.00096
Identities = 32/94 (34%), Positives = 46/94 (48%)
Query: 144 RREEKRSIRHDHREKPRE-DHGR-REDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHES 201
RRE+ +H HR RE D R R+ +R R S + RS H R E+ R+ +
Sbjct: 19 RREKSDGDKHRHRHHDRERDRDRDRDHRRDRDRSREHRHRHRSHRHHSRSRERGSDRN-N 77
Query: 202 ESYLREDQDRRGGDKSSTGRGDSSSH---RHRER 232
ES+ R+D R + S+ G+ H RHRE+
Sbjct: 78 ESH-RDDGHRHKRSRQSSDHGEDRDHHKRRHREK 110
>DICTYBASE|DDB_G0268004 [details] [associations]
symbol:snrp70 "U1 small nuclear ribonucleoprotein 70
kDa protein" species:44689 "Dictyostelium discoideum" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS] [GO:0005685
"U1 snRNP" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0268004 GenomeReviews:CM000150_GR
GO:GO:0000166 Gene3D:3.30.70.330 EMBL:AAFI02000003 GO:GO:0005681
GO:GO:0003723 GO:GO:0043484 GO:GO:0000398 eggNOG:COG0724
HSSP:Q14103 GO:GO:0005685 KO:K11093 InterPro:IPR022023 Pfam:PF12220
RefSeq:XP_647483.1 ProteinModelPortal:Q55FQ0 STRING:Q55FQ0
EnsemblProtists:DDB0233134 GeneID:8616290 KEGG:ddi:DDB_G0268004
OMA:YLMEPAP Uniprot:Q55FQ0
Length = 459
Score = 109 (43.4 bits), Expect = 0.00097, P = 0.00097
Identities = 45/150 (30%), Positives = 59/150 (39%)
Query: 82 GDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQ 141
G G R G DRS R ++ G + D R +G R E +Q
Sbjct: 256 GSGGSGGDRGDRGDRDRGDRGDRSDRSDRDRERG----RGDRDHRGSGGER---ERERDQ 308
Query: 142 SDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHES 201
DR ++ R D ++ R D G R D RS R D+ E R R+D R D R R
Sbjct: 309 RDRGGDRGGDRGDRSDRGRSDRGDRGD-RSDRGRDDRE---RGRDD--RGDRGRDDRRGG 362
Query: 202 ESYLREDQDRRGGDKSSTGRGDSSSHRHRE 231
D+DR G + G D S R R+
Sbjct: 363 S-----DRDRDRGSRDDRGDRDDRSDRGRD 387
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 232 198 0.00083 111 3 11 23 0.39 33
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 75
No. of states in DFA: 586 (62 KB)
Total size of DFA: 174 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.06u 0.12s 27.18t Elapsed: 00:00:01
Total cpu time: 27.07u 0.12s 27.19t Elapsed: 00:00:01
Start: Sat May 11 07:31:11 2013 End: Sat May 11 07:31:12 2013