BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026836
(232 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224104290|ref|XP_002313385.1| predicted protein [Populus trichocarpa]
gi|222849793|gb|EEE87340.1| predicted protein [Populus trichocarpa]
Length = 243
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/151 (64%), Positives = 110/151 (72%), Gaps = 9/151 (5%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSH 89
+NLNGAQ+LGR IRVDHV KYKKKEEEDEET Q+ RE RGVC AFQRGEC RG GC+FSH
Sbjct: 95 DNLNGAQVLGRIIRVDHVTKYKKKEEEDEETAQQKREARGVCHAFQRGECNRGAGCRFSH 154
Query: 90 NEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKR 149
+EQRAANTG G QD+SSRWGHE F+G S S + E +P Q+DRREEKR
Sbjct: 155 DEQRAANTGWGAQDKSSRWGHEMFDG------PKKSEERSSYNMPSESHPKQNDRREEKR 208
Query: 150 SIRHDHRE---KPREDHGRREDKRSRRHSDN 177
S HD E KPRED+ RREDK+ RR D+
Sbjct: 209 SRWHDDNEIVQKPREDYNRREDKKLRRLEDD 239
>gi|297819328|ref|XP_002877547.1| hypothetical protein ARALYDRAFT_905943 [Arabidopsis lyrata subsp.
lyrata]
gi|297323385|gb|EFH53806.1| hypothetical protein ARALYDRAFT_905943 [Arabidopsis lyrata subsp.
lyrata]
Length = 316
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 110/173 (63%), Gaps = 22/173 (12%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCK 86
+NLNGA +LGRTI+VDH +YKK EEEDEETR++ RE RGVCRAFQRGECTRGD CK
Sbjct: 92 LAVDNLNGALVLGRTIKVDHCREYKKHEEEDEETRRQNREARGVCRAFQRGECTRGDSCK 151
Query: 87 FSHNEQRAANTGGG-PQDRSSRWGHEKFEGFSWG----------KNDS---SSRATGSGR 132
FSH+E+RAANTG G +DRSSRW H+KF G G K+D+ S R G G
Sbjct: 152 FSHDEKRAANTGWGHEEDRSSRWDHDKFNGAKKGGTSFGHRGDFKSDAEEKSYRGKGDGD 211
Query: 133 VALEGNPNQSDRRE-EKRSIR----HDHREKPREDHGRREDKRSRRHSDNNEF 180
A G P + +R E E R +D RE+ R G +D RSR H+ N++
Sbjct: 212 -AWYGRPKERERVEREDMGPRSRDAYDMREQKRS--GPYDDSRSRSHNAGNDY 261
>gi|297745915|emb|CBI15971.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 125/203 (61%), Gaps = 16/203 (7%)
Query: 25 SRFLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDG 84
+ +NLNGAQILGR IRVDHV+ YKKKEEEDEET ++ RE RGVCRAFQRGEC RG G
Sbjct: 90 TNLAVDNLNGAQILGRIIRVDHVSNYKKKEEEDEETERQKREARGVCRAFQRGECNRGAG 149
Query: 85 CKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDR 144
CKFSH+EQRA+NTG G +D+SSRWGH+KF+G + K+D + + RV E + R
Sbjct: 150 CKFSHDEQRASNTGWGSEDKSSRWGHDKFQGST--KSDGRPNSIPTNRVH-EPTVGEGHR 206
Query: 145 --REEKRSIRHDHREKPREDHGRREDKRSR--------RHSDNNEFEARSREDHYRR-DE 193
++ RS R E RE H RR + R R + E E +ED RR E
Sbjct: 207 FGNKDARSSRTKGSEGGRESHHRRSELDIRDQDGRGLERQMEQKEKELNYKEDQDRRTTE 266
Query: 194 KRPKRHESESYLREDQDRRGGDK 216
+R R +S ED DRRG D+
Sbjct: 267 RRSGRPDSNP--GEDHDRRGEDQ 287
>gi|15232729|ref|NP_190296.1| RNA-binding motif protein, X-linked 2 [Arabidopsis thaliana]
gi|75337070|sp|Q9SD61.1|C3H42_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 42;
Short=AtC3H42
gi|6522593|emb|CAB61958.1| putative RNA binding protein [Arabidopsis thaliana]
gi|27311733|gb|AAO00832.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|34098859|gb|AAQ56812.1| At3g47120 [Arabidopsis thaliana]
gi|332644724|gb|AEE78245.1| RNA-binding motif protein, X-linked 2 [Arabidopsis thaliana]
Length = 352
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/87 (71%), Positives = 72/87 (82%), Gaps = 1/87 (1%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCK 86
+NLNGA +LGRTI+VDH YKK EEEDEETR++ RE RGVCRAFQRGECTRGD CK
Sbjct: 92 LAVDNLNGALVLGRTIKVDHCGAYKKHEEEDEETRRQNREARGVCRAFQRGECTRGDSCK 151
Query: 87 FSHNEQRAANTGGG-PQDRSSRWGHEK 112
FSH+E+RAANTG G +DRSS+W H+K
Sbjct: 152 FSHDEKRAANTGWGHEEDRSSKWDHDK 178
>gi|356551855|ref|XP_003544288.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
[Glycine max]
Length = 354
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/242 (45%), Positives = 137/242 (56%), Gaps = 56/242 (23%)
Query: 25 SRFLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDG 84
+ +NLNGAQ+LGR IRVDHV KYKKKEEEDEET ++ RE RGVCRAFQRGECTRG
Sbjct: 90 TNLAVDNLNGAQVLGRIIRVDHVDKYKKKEEEDEETERQKREARGVCRAFQRGECTRGAS 149
Query: 85 CKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFS----WGKN-----------DSSSRATG 129
CKFSH+EQRAANTG G ++ +WGH+KF+G G N DS SRA
Sbjct: 150 CKFSHDEQRAANTGWGREEDKPKWGHDKFDGPKKERRSGNNQSNHIAETRDRDSFSRARN 209
Query: 130 SGRVALEGNPNQSDR----------------------------------REEKRSIRHDH 155
+ L+ P +SDR REEKRSI+ D
Sbjct: 210 ND-AELDNQPKRSDRKEMTKREYRYKREEKGSRRDDYDGMKLEPKDHHLREEKRSIKPDD 268
Query: 156 RE-KPRE-DHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRH---ESESYLREDQD 210
E +P+ D REDKRSRR DN++ ++SRE H ++++ ++H ES RED D
Sbjct: 269 VEVEPKSRDSDIREDKRSRRR-DNDDIVSKSREPHGYSEDRKSRKHSEGESAPKPREDYD 327
Query: 211 RR 212
R+
Sbjct: 328 RK 329
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 133 VALEGNPNQSDRREEKRSIRHDHRE---KPREDHGRREDKRSRRHSDNNEFEARSREDHY 189
V +E SD RE+KRS R D+ + K RE HG ED++SR+HS+ E + RED+
Sbjct: 269 VEVEPKSRDSDIREDKRSRRRDNDDIVSKSREPHGYSEDRKSRKHSE-GESAPKPREDYD 327
Query: 190 RRDEKRPKRHES 201
R+ +KR R+ S
Sbjct: 328 RKQDKRSYRNYS 339
>gi|225434618|ref|XP_002279321.1| PREDICTED: uncharacterized protein LOC100246760 [Vitis vinifera]
Length = 429
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 128/201 (63%), Gaps = 19/201 (9%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCK 86
+NLNGAQILGR IRVDHV+ YKKKEEEDEET ++ RE RGVCRAFQRGEC RG GCK
Sbjct: 92 LAVDNLNGAQILGRIIRVDHVSNYKKKEEEDEETERQKREARGVCRAFQRGECNRGAGCK 151
Query: 87 FSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDR-- 144
FSH+EQRA+NTG G +D+SSRWGH+KF+G + K+D + + RV E + R
Sbjct: 152 FSHDEQRASNTGWGSEDKSSRWGHDKFQGST--KSDGRPNSIPTNRVH-EPTVGEGHRFG 208
Query: 145 REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESESY 204
++ RS R E RE H RR +E + R ++ R E++ ++ E E
Sbjct: 209 NKDARSSRTKGSEGGRESHHRR-----------SELDIRDQDG--RGLERQMEQKEKELN 255
Query: 205 LREDQDRRGGDKSSTGRGDSS 225
+EDQDRR ++ S GR DS+
Sbjct: 256 YKEDQDRRTTERRS-GRPDSN 275
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 67/106 (63%), Gaps = 12/106 (11%)
Query: 135 LEGNPNQSDRREEKRSIRH--------DHREKPREDHGRREDKRSRRHSDNNEFEARSRE 186
E NP + DR+EE R R + PREDH RRE+KRSRRH E E++ +E
Sbjct: 328 FESNPREDDRKEEDRDRRATERRSRRSEFESNPREDHDRREEKRSRRH----ELESKPKE 383
Query: 187 DHYRRDEKRPKRHESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
DH RR+EK+ +RHESESYLRED GDK S D++SHRHRER
Sbjct: 384 DHDRREEKQSRRHESESYLREDPRDERGDKRSGHSRDTASHRHRER 429
>gi|449460375|ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Cucumis sativus]
Length = 395
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 129/216 (59%), Gaps = 38/216 (17%)
Query: 25 SRFLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDG 84
+ +NLNGAQILGR +RVDHV+KYKKKEEEDEE Q+ RE RGVCRAFQRGECTRG G
Sbjct: 90 TNLAVDNLNGAQILGRIVRVDHVSKYKKKEEEDEEEEQKKREARGVCRAFQRGECTRGAG 149
Query: 85 CKFSHNEQRAANTG-GGPQDRSSRWGHEKFEGFSWGKNDSSSRATG-------------- 129
CKFSH+EQRAA+TG G +D SS+WGH+KF+ S +D A G
Sbjct: 150 CKFSHDEQRAADTGWGAAEDASSKWGHDKFD--SRKNHDKELHAKGRKTSDNLGRHPRET 207
Query: 130 SGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHY 189
SG + E P D +E K REDHG +++KRSRR+ + + +S +D Y
Sbjct: 208 SGSLRQENRPRGWDDSKESEL-------KSREDHGGKDEKRSRRYDLDGNSDPKSGDDQY 260
Query: 190 --------------RRDEKRPKRHESESYLREDQDR 211
R+DEKR ++H+++ ++ + DR
Sbjct: 261 KGEEKRSSRNHDDNRKDEKRSRKHDNDDEMKLEDDR 296
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 144 RREEKRSIRHDHREKP----REDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRH 199
R+EE R R+ E P R+ R ED+ S+RH D E+ + RED RR+ RH
Sbjct: 298 RKEENRYRRNQDNELPQHSRRDYKTREEDRSSKRHGDK-EYPPKLREDDKRRERDVSVRH 356
Query: 200 ESESYLREDQDRRGGDKSSTGRGDSSSHRHRER 232
SESY RE+ D + +SS G DSSSH HRER
Sbjct: 357 RSESYRRENPDEKRDYRSSHGGRDSSSHSHRER 389
>gi|357490653|ref|XP_003615614.1| RNA binding domain protein [Medicago truncatula]
gi|355516949|gb|AES98572.1| RNA binding domain protein [Medicago truncatula]
Length = 393
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 120/186 (64%), Gaps = 20/186 (10%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCK 86
+NLNGAQ+ GR IRVDHV KYKK EEEDEE ++ RE RGVCRAFQRGECTRG GCK
Sbjct: 92 LAVDNLNGAQVSGRIIRVDHVDKYKKMEEEDEEEAKQKREARGVCRAFQRGECTRGAGCK 151
Query: 87 FSHNEQRAANTGGGPQDRSSRWGHEKFEGFS----WGKN-----------DSSSRATGSG 131
FSH+EQRAANTG G + ++ ++K++G +G N DS SRA G+G
Sbjct: 152 FSHDEQRAANTGWG-DNGIAKGDNDKYDGPKKERRYGNNQPDRIPETRDRDSRSRAHGNG 210
Query: 132 RVALEGNPNQSDRREEKRSIRHDHREK--PREDHGRREDKRSRRHSDNNEFEARSREDHY 189
+ L+ +SDRREEK R D RE+ RRE+KR R + D +EFE RED +
Sbjct: 211 -MELDNPSKRSDRREEKMLRRQDGDGNFVGRENTSRREEKRPRDYKD-DEFEQWPREDRH 268
Query: 190 RRDEKR 195
RR+EKR
Sbjct: 269 RREEKR 274
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 7/86 (8%)
Query: 133 VALEGNPNQSDRREEKRSIRHDHRE---KPREDHGRREDKRSRRHSDNNEFEARSREDHY 189
V E SD RE+KR R D + K RE G RE++RSR+H+D +E RSREDH
Sbjct: 302 VKFEPKSRDSDLREDKRPSRRDVDDFGSKSRETQGSREERRSRKHTD-DESMPRSREDHD 360
Query: 190 RRDEKRPKRHE---SESYLREDQDRR 212
R+ + R + SES R D DRR
Sbjct: 361 RKQDNRSYHKDADRSESKGRNDSDRR 386
>gi|147840589|emb|CAN72715.1| hypothetical protein VITISV_032469 [Vitis vinifera]
Length = 737
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 124/217 (57%), Gaps = 35/217 (16%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSH 89
+NLNGAQILGR IRVDHV+ YKKKEEEDEET ++ RE RGVCRAFQRGEC RG GCKFSH
Sbjct: 95 DNLNGAQILGRIIRVDHVSNYKKKEEEDEETERQKREARGVCRAFQRGECNRGAGCKFSH 154
Query: 90 NEQ-------------------RAANTGGGPQDRSSRWGHEKFEGFSWGKNDSSSRATGS 130
+EQ RA+NTG G +D+SSRWGH+KF+G + K+D + +
Sbjct: 155 DEQDLTFSWLSKSWRLVLQGLERASNTGWGSEDKSSRWGHDKFQGST--KSDGRPNSIPT 212
Query: 131 GRVALEGNPNQSDR--REEKRSIRHDHREKPREDHGRREDKRSR--------RHSDNNEF 180
RV E + R ++ RS R E RE H RR + R R + E
Sbjct: 213 NRVH-EPTVGEGHRFGNKDARSSRTKGSEGGRESHHRRSELDIRDQDGRGLERQMEQKEK 271
Query: 181 EARSREDHYRR-DEKRPKRHESESYLREDQDRRGGDK 216
E +ED RR E+R R +S ED DRRG D+
Sbjct: 272 ELNYKEDQDRRTTERRSGRPDSNP--GEDHDRRGEDQ 306
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 140 NQSDRREEKRSIRHDHREKPREDHGRREDK---RSRRHSDNNEFEARSREDHYRRDEKRP 196
+Q R E+RS RHD PRED + ED+ + R S +EFE+ REDH RR+EKR
Sbjct: 332 DQDIRATERRSRRHDFESNPREDDRKEEDRDRRATERRSRRSEFESNPREDHDRREEKRS 391
Query: 197 KRHESES 203
+RHE ES
Sbjct: 392 RRHELES 398
>gi|297793411|ref|XP_002864590.1| hypothetical protein ARALYDRAFT_358097 [Arabidopsis lyrata subsp.
lyrata]
gi|297310425|gb|EFH40849.1| hypothetical protein ARALYDRAFT_358097 [Arabidopsis lyrata subsp.
lyrata]
Length = 173
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 65/82 (79%)
Query: 25 SRFLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDG 84
+ +NLNGA++LGR I+V+H KY K+EE+DEET+ + RE RGVCRAFQR ECTRGDG
Sbjct: 90 TNLAVDNLNGAKVLGRIIKVEHCGKYSKREEDDEETKHKKREARGVCRAFQRKECTRGDG 149
Query: 85 CKFSHNEQRAANTGGGPQDRSS 106
CKFSH+E R ANTG G +DR S
Sbjct: 150 CKFSHDENRGANTGWGHEDRRS 171
>gi|356498939|ref|XP_003518303.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
[Glycine max]
Length = 235
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/140 (57%), Positives = 93/140 (66%), Gaps = 16/140 (11%)
Query: 25 SRFLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDG 84
+ +NLNGAQ+LGR IRVDHV KYKKKEEEDEET ++ RE RGVCRAFQRGECTRG
Sbjct: 90 TNLAVDNLNGAQVLGRIIRVDHVDKYKKKEEEDEETERQKREARGVCRAFQRGECTRGAS 149
Query: 85 CKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFS----WGKN-----------DSSSRATG 129
CKFSH+EQRAANTG G ++ +WGH+KFEG G N DS +RA
Sbjct: 150 CKFSHDEQRAANTGWGREEDKPKWGHDKFEGPKKERRSGNNQSNHIPETRDRDSRTRARN 209
Query: 130 SGRVALEGNPNQSDRREEKR 149
L+ P +SDRRE KR
Sbjct: 210 FD-AELDNQPKKSDRRETKR 228
>gi|326520181|dbj|BAK04015.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 404
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 69/89 (77%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCK 86
+NLNGA++LGR IRVDHV KYKKKEEEDEE Q+ REERGVC AFQ+GEC RGD CK
Sbjct: 92 LAVDNLNGAKVLGRIIRVDHVEKYKKKEEEDEEELQKKREERGVCYAFQKGECNRGDACK 151
Query: 87 FSHNEQRAANTGGGPQDRSSRWGHEKFEG 115
+SH+EQR ANTG G ++ +W H++ G
Sbjct: 152 YSHDEQRNANTGWGSKEDDPKWEHDRHRG 180
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 5/40 (12%)
Query: 68 RGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSR 107
RGVC AFQ+GEC+RG C+FSH+EQR ANT DR SR
Sbjct: 218 RGVCYAFQKGECSRGASCRFSHDEQRNANT-----DRGSR 252
>gi|357123042|ref|XP_003563222.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Brachypodium distachyon]
Length = 385
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 69/87 (79%), Gaps = 1/87 (1%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCK 86
+NLNGA++LGR IRVDHV KYKKKEEEDE+ Q+ REERGVC AFQ+GEC RGD C+
Sbjct: 92 LAVDNLNGAKVLGRIIRVDHVDKYKKKEEEDEDELQKKREERGVCYAFQKGECNRGDACR 151
Query: 87 FSHNEQRAANTG-GGPQDRSSRWGHEK 112
+SH+EQR ANTG G +D + +W H++
Sbjct: 152 YSHDEQRNANTGWGSKEDINPKWEHDR 178
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 84/184 (45%), Gaps = 32/184 (17%)
Query: 62 QRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTG-GGPQDRSSR----------WGH 110
Q + RG+C AFQ+GEC RG C+FSH+E+R A+ G +DR++R H
Sbjct: 213 QVAVQARGICYAFQKGECNRGASCRFSHDEERNADAGRSSKEDRNARRDQDRHLDPPKSH 272
Query: 111 EKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRREDKR 170
+KF S++ + R E P + + + + D R HG R K
Sbjct: 273 KKFPS-------SAADQSFPDRTEEESRPANREGQSSRSEVYRDR--DSRVKHGDRSTKD 323
Query: 171 S-RRHSDNNEFEARSREDHYRRDEKRPKRHESESYLREDQDRRGGDKSSTG----RGDSS 225
S RRH + E RSR + +R D+ R+ E R + R D+ S G RGD
Sbjct: 324 SDRRHEKSPE---RSRGERHRSDD----RYMQEREERSESKRSRNDRDSGGRYERRGDEE 376
Query: 226 SHRH 229
+ R+
Sbjct: 377 AERY 380
>gi|168006572|ref|XP_001755983.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692913|gb|EDQ79268.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 234
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 69/94 (73%), Gaps = 3/94 (3%)
Query: 25 SRFLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDG 84
+ +NLNGA++ R I+VDHV+ YK+K EEDEE +QR REERGVC AFQRGEC RGD
Sbjct: 90 TVLAVDNLNGARVDSRIIKVDHVSDYKRKLEEDEEEKQRKREERGVCYAFQRGECKRGDD 149
Query: 85 CKFSHNEQRAANTG---GGPQDRSSRWGHEKFEG 115
CKFSH+EQR +NTG GG + W H++F+G
Sbjct: 150 CKFSHDEQRNSNTGWGEGGSRKDGGSWKHDQFDG 183
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 57 DEETRQRMREERGVCRAFQRGECTRGDGCKFSHN 90
D+ +R + RGVC AFQRGEC RGDGCKF+H+
Sbjct: 201 DDGMNEREDKPRGVCYAFQRGECNRGDGCKFAHD 234
>gi|226496357|ref|NP_001149007.1| RNA-binding motif protein, X-linked 2 [Zea mays]
gi|195623912|gb|ACG33786.1| RNA-binding motif protein, X-linked 2 [Zea mays]
Length = 298
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCK 86
+NLNGA++LGR I+VDHV+KYKKKEEEDEE Q+ RE RGVC AFQ+GEC RG C+
Sbjct: 92 LAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCR 151
Query: 87 FSHNEQRAANTG-GGPQDRSSRWGHEK 112
+SH+EQR ANTG G +D +RW H+K
Sbjct: 152 YSHDEQRNANTGWGSKEDSGARWEHDK 178
>gi|223946841|gb|ACN27504.1| unknown [Zea mays]
gi|407232618|gb|AFT82651.1| C3H30 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414873727|tpg|DAA52284.1| TPA: RNA-binding motif protein, X-linked 2 [Zea mays]
Length = 298
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCK 86
+NLNGA++LGR I+VDHV+KYKKKEEEDEE Q+ RE RGVC AFQ+GEC RG C+
Sbjct: 92 LAVDNLNGAKVLGRIIKVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCR 151
Query: 87 FSHNEQRAANTG-GGPQDRSSRWGHEK 112
+SH+EQR ANTG G +D +RW H+K
Sbjct: 152 YSHDEQRNANTGWGSKEDSGARWEHDK 178
>gi|115456325|ref|NP_001051763.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|122246709|sp|Q10B98.1|C3H25_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 25;
Short=OsC3H25
gi|15042832|gb|AAK82455.1|AC091247_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|18855068|gb|AAL79760.1|AC096687_24 putative small nuclear ribonucleoprotein [Oryza sativa Japonica
Group]
gi|108711850|gb|ABF99645.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550234|dbj|BAF13677.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|125588469|gb|EAZ29133.1| hypothetical protein OsJ_13196 [Oryza sativa Japonica Group]
Length = 312
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 122/228 (53%), Gaps = 33/228 (14%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCK 86
+NLNGA++LGR +RVDHV+KYKKKEEEDEE Q+ RE RGVC AFQ+GEC RG C+
Sbjct: 92 LAVDNLNGAKVLGRIVRVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCR 151
Query: 87 FSHNEQRAANTGGGPQDRS-SRW----------GHEKFEGFSWGKNDSSSRATGSGRVAL 135
+SH+EQR ANTG G ++ S +RW H+KF S G+ RA +
Sbjct: 152 YSHDEQRNANTGWGSKEESKARWEHDRHHEPPMSHKKFPS-SAGEQRFPDRAKEENKST- 209
Query: 136 EGNPNQSDRRE--EKRSIRHDHREKPREDHGR----REDKRSR--RHSDNNEFEARSRED 187
G QS R E + R R H ++ +DH R R +RSR R +N+ +
Sbjct: 210 -GREGQSSRSEAYKDRDSRLRHSDRGSKDHDRYRHDRSPERSRGDRQRNNDRYAQG---- 264
Query: 188 HYRRDEKRPKRHESESYLREDQDRRGGDKSSTG----RGDSSSHRHRE 231
RDEK + + DQ R D S+G RG+ S R+R+
Sbjct: 265 ---RDEKSERYRSEVKHDEGDQKRSRRDTDSSGHYERRGNEDSERYRK 309
>gi|356526389|ref|XP_003531800.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 617
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 55/63 (87%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSH 89
+NLNGAQ+LGR I+VDHV KYKKKEEEDEET + RE RGVCRAFQRGECTRG CKFSH
Sbjct: 95 DNLNGAQVLGRIIKVDHVDKYKKKEEEDEETERLKREARGVCRAFQRGECTRGASCKFSH 154
Query: 90 NEQ 92
+EQ
Sbjct: 155 DEQ 157
>gi|242037549|ref|XP_002466169.1| hypothetical protein SORBIDRAFT_01g002770 [Sorghum bicolor]
gi|241920023|gb|EER93167.1| hypothetical protein SORBIDRAFT_01g002770 [Sorghum bicolor]
Length = 298
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 108/190 (56%), Gaps = 11/190 (5%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCK 86
+NLNGA++LGR IRVDHV+KYKKKEEEDEE +Q+ RE RGVC AFQ+GEC RG C+
Sbjct: 92 LAVDNLNGAKVLGRIIRVDHVSKYKKKEEEDEEEQQKKREARGVCYAFQKGECNRGASCR 151
Query: 87 FSHNEQRAANTG-GGPQDRSSRWGHEKFEGFSWGKNDSSSRATGSGRVALEGNPNQSDR- 144
+SH+EQR ANTG G +D +RW H+K SR E N S +
Sbjct: 152 YSHDEQRNANTGWGSKEDSGARWEHDKHSDVP------KSRGMCYAFQKGECNRGASCKF 205
Query: 145 -REEKRSIRHDHREKPREDHGRREDKRSRRHSDNNEFEARSREDHYRRDEKRPKRHESES 203
+E+R++ ++R+ R+ R ++ R S + + R+ + R + P+R E
Sbjct: 206 SHDEQRNV--NNRQSSRDGEPSRSERYGDRESRSRHDDRRAEDRDRYRRDNSPERLRGER 263
Query: 204 YLREDQDRRG 213
+D+ RG
Sbjct: 264 QRNDDRSDRG 273
>gi|348680071|gb|EGZ19887.1| hypothetical protein PHYSODRAFT_489640 [Phytophthora sojae]
Length = 536
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 32 LNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNE 91
L+G ++GR + +D+ A+ + + EE +++++ +G+C FQ+G+CTRGD CKF+H
Sbjct: 176 LDGMVVMGRPMNIDYGARDEGYAQAREELQKKLK--KGICHKFQQGQCTRGDACKFAHVM 233
Query: 92 Q 92
Q
Sbjct: 234 Q 234
>gi|301106378|ref|XP_002902272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098892|gb|EEY56944.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 528
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 32 LNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNE 91
L+G ++GR + +D+ A+ + + EE +++++ +GVC FQ+G+CTRGD CKF+H
Sbjct: 179 LDGMVVMGRPMSIDYGARDEGYAQAREELQKKLK--KGVCHKFQQGQCTRGDACKFAHVM 236
Query: 92 Q 92
Q
Sbjct: 237 Q 237
>gi|71021267|ref|XP_760864.1| hypothetical protein UM04717.1 [Ustilago maydis 521]
gi|46100960|gb|EAK86193.1| hypothetical protein UM04717.1 [Ustilago maydis 521]
Length = 385
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 59
+NLNGAQ+LGRT+RVDHVA YK+ + DE+
Sbjct: 122 DNLNGAQVLGRTLRVDHVASYKQPKVTDEQ 151
>gi|342319853|gb|EGU11798.1| RNA-binding protein Cwf29 [Rhodotorula glutinis ATCC 204091]
Length = 300
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVC 71
+NLNGAQ+LGRT+RVDHV YK+ E + E + + R+E+ +
Sbjct: 90 DNLNGAQVLGRTLRVDHVLNYKQLERDQESGKMKERDEQSLA 131
>gi|343426144|emb|CBQ69675.1| related to rna binding motif protein [Sporisorium reilianum SRZ2]
Length = 368
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 59
+NLNGAQ+LGRT+RVDHVA YK+ + DE+
Sbjct: 116 DNLNGAQVLGRTLRVDHVASYKQPKVTDED 145
>gi|443900181|dbj|GAC77508.1| predicted RNA-binding protein [Pseudozyma antarctica T-34]
Length = 318
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 59
+NLNGAQ+LGRT+RVDHVA YK+ + D +
Sbjct: 118 DNLNGAQVLGRTLRVDHVASYKQPKMRDAD 147
>gi|350423156|ref|XP_003493401.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Bombus
impatiens]
Length = 139
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 4/41 (9%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEE---DEETRQRMREE 67
+NLNG +ILGRTIRVDHVA YK ++ DEET+ R+R+E
Sbjct: 93 DNLNGIKILGRTIRVDHVANYKAPKDSKNVDEETK-RLRKE 132
>gi|405960385|gb|EKC26312.1| RNA-binding motif protein, X-linked 2 [Crassostrea gigas]
Length = 233
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 30/39 (76%), Gaps = 4/39 (10%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEE---EDEET-RQRM 64
+NLNG ++LGRTIRVDHV KYK +E EDEET R RM
Sbjct: 83 DNLNGIKLLGRTIRVDHVEKYKVPKEHGDEDEETMRVRM 121
>gi|325185008|emb|CCA19499.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 430
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 33 NGAQILGRTIRVDHV----AKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFS 88
NG ++GR + VD A K+K EE E + ++G+C FQ C GD CKF+
Sbjct: 179 NGKIVIGRPMHVDLSGEDDASIKQKREEMER-----KLKKGICNRFQSNSCLHGDACKFA 233
Query: 89 H---NEQRAANTGGGP 101
H N++ +A T P
Sbjct: 234 HVQKNQKESATTSVEP 249
>gi|170060753|ref|XP_001865940.1| RNA-binding motif protein [Culex quinquefasciatus]
gi|167879121|gb|EDS42504.1| RNA-binding motif protein [Culex quinquefasciatus]
Length = 137
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Query: 30 NNLNGAQILGRTIRVDHVAKYK--KKEEEDEETRQRMRE 66
+NLNG ++LGRT+RVDHV+ YK K ++ DEETR+ E
Sbjct: 93 DNLNGIKLLGRTLRVDHVSDYKPPKDDKADEETRRLYME 131
>gi|383847795|ref|XP_003699538.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Megachile
rotundata]
Length = 139
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 4/41 (9%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEE---DEETRQRMREE 67
+N NG +ILGRTIRVDHVA YK ++ DEET+ R+R+E
Sbjct: 93 DNFNGTKILGRTIRVDHVANYKAPKDSKNIDEETK-RLRKE 132
>gi|260834392|ref|XP_002612195.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
gi|229297569|gb|EEN68204.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
Length = 418
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYK--KKEEEDEETRQRMREERGVC 71
+N NG +I GRTIRVDHV+ Y+ K+ EED++ +++R+E GV
Sbjct: 91 LAVDNFNGVKIKGRTIRVDHVSNYRVPKEHEEDDDITKKIRQE-GVA 136
>gi|402226055|gb|EJU06115.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 292
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 22/25 (88%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKE 54
+NLNGA I+GRTIRVDHV+KYK E
Sbjct: 90 DNLNGANIVGRTIRVDHVSKYKNLE 114
>gi|255081837|ref|XP_002508137.1| predicted protein [Micromonas sp. RCC299]
gi|226523413|gb|ACO69395.1| predicted protein [Micromonas sp. RCC299]
Length = 314
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 68 RGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEGFSWGKND 122
+ VC A+QRGECTRGD C+F+H E GGG R G F G+ D
Sbjct: 191 KPVCYAYQRGECTRGDACRFAHEE------GGGGDSRPPSRGAPICYAFQRGECD 239
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 18/20 (90%)
Query: 71 CRAFQRGECTRGDGCKFSHN 90
C AFQ+GECTRGD C+FSH+
Sbjct: 262 CYAFQKGECTRGDACRFSHD 281
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 70 VCRAFQRGECTRGDGCKFSHN 90
+C AFQRGEC RGD C+FSH+
Sbjct: 229 ICYAFQRGECDRGDSCRFSHD 249
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 71 CRAFQRGECTRGDGCKFSHNE 91
C AFQRGEC RGD C+FSH +
Sbjct: 294 CYAFQRGECDRGDACRFSHEQ 314
>gi|393236038|gb|EJD43589.1| hypothetical protein AURDEDRAFT_185479 [Auricularia delicata
TFB-10046 SS5]
Length = 281
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 59
+NLNGA++L RTIRVDHV+ YK+ +E+D +
Sbjct: 88 DNLNGAKVLDRTIRVDHVSDYKQPKEKDAD 117
>gi|443916812|gb|ELU37760.1| RNA-binding protein Cwf29 [Rhizoctonia solani AG-1 IA]
Length = 933
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 59
+NLNGAQ+LGRT+RVDHV YK+ + + E+
Sbjct: 91 DNLNGAQVLGRTLRVDHVQNYKQPKVKGED 120
>gi|340501726|gb|EGR28473.1| hypothetical protein IMG5_174580 [Ichthyophthirius multifiliis]
Length = 222
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 60 TRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAAN---TGGGPQDRSSRWGHE 111
T+ ++R CRAFQRGEC G+ CK+SH ++R N G + ++ HE
Sbjct: 73 TKNTYNQQRNECRAFQRGECKYGENCKYSHEKRRTCNDFQNGNCKYGENCKYSHE 127
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 37 ILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSH------- 89
G + H + K++ E +EE R R+++ VC +Q G C+ GD C+FSH
Sbjct: 20 TYGENCKYAHQIQPKRQNENNEERRYETRQQK-VCFDYQNGNCSYGDNCRFSHRTKNTYN 78
Query: 90 ---NEQRAANTGGGPQDRSSRWGHEK 112
NE RA G + ++ HEK
Sbjct: 79 QQRNECRAFQRGECKYGENCKYSHEK 104
>gi|303289687|ref|XP_003064131.1| highly cold-shock DNA binding protein [Micromonas pusilla CCMP1545]
gi|226454447|gb|EEH51753.1| highly cold-shock DNA binding protein [Micromonas pusilla CCMP1545]
Length = 325
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 19/23 (82%)
Query: 67 ERGVCRAFQRGECTRGDGCKFSH 89
E G+CR FQRG CTRG GC+FSH
Sbjct: 150 EAGICRDFQRGNCTRGPGCRFSH 172
>gi|392568432|gb|EIW61606.1| hypothetical protein TRAVEDRAFT_69926 [Trametes versicolor
FP-101664 SS1]
Length = 333
Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGV 70
+NLNGA+IL RTIRVDHV YK+ E+ E+ REE+ +
Sbjct: 90 DNLNGAKILERTIRVDHVKNYKQPREKGEDGELHEREEQSL 130
>gi|164657279|ref|XP_001729766.1| hypothetical protein MGL_3310 [Malassezia globosa CBS 7966]
gi|159103659|gb|EDP42552.1| hypothetical protein MGL_3310 [Malassezia globosa CBS 7966]
Length = 357
Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 59
+NLNG+Q+LGRT+RVDHVA +K++ D E
Sbjct: 112 DNLNGSQVLGRTLRVDHVANFKQERVRDAE 141
>gi|378733759|gb|EHY60218.1| hypothetical protein HMPREF1120_08187 [Exophiala dermatitidis
NIH/UT8656]
Length = 370
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGV 70
+NL GA++LGR +RVDH +YKKK++EDE+T + R E+ V
Sbjct: 89 LAVDNLGGAEVLGRLLRVDHT-RYKKKDDEDEDTYRIDRWEQEV 131
>gi|238481591|ref|NP_001154786.1| uncharacterized protein [Arabidopsis thaliana]
gi|332009720|gb|AED97103.1| uncharacterized protein [Arabidopsis thaliana]
Length = 65
Score = 43.1 bits (100), Expect = 0.088, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 37 ILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAF 74
+LGR I+V+H KY K+EEEDEET+Q+ RE ++F
Sbjct: 12 VLGRIIKVEHCGKYLKREEEDEETKQKKREAPWCLQSF 49
>gi|395835423|ref|XP_003790679.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Otolemur
garnettii]
Length = 331
Score = 43.1 bits (100), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE DEETR+
Sbjct: 95 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEVDEETRK 130
>gi|198436817|ref|XP_002127336.1| PREDICTED: similar to RNA binding motif protein, X-linked 2 [Ciona
intestinalis]
Length = 377
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEEEDE--ETRQRMREERGVC 71
+NLNG++I GR +RVDHV Y+ +E+DE E +R+R ERGV
Sbjct: 93 LAVDNLNGSKIKGRQMRVDHVLAYQVPKEDDEVDEVTERIR-ERGVA 138
>gi|62858501|ref|NP_001016941.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
gi|89268233|emb|CAJ83312.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
Length = 269
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 30 NNLNGAQILGRTIRVDHVAKYK--KKEEEDEETRQRMRE 66
+NLNG ++ GRTIRVDHVA Y+ K E+ +E Q +RE
Sbjct: 95 DNLNGIKVKGRTIRVDHVANYRPPKDAEDIDEITQSLRE 133
>gi|166796147|gb|AAI59019.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
gi|166796532|gb|AAI59007.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
Length = 269
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 30 NNLNGAQILGRTIRVDHVAKYK--KKEEEDEETRQRMRE 66
+NLNG ++ GRTIRVDHVA Y+ K E+ +E Q +RE
Sbjct: 95 DNLNGIKVKGRTIRVDHVANYRPPKDAEDIDEITQSLRE 133
>gi|301619753|ref|XP_002939264.1| PREDICTED: hypothetical protein LOC100497806 [Xenopus (Silurana)
tropicalis]
Length = 280
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 30 NNLNGAQILGRTIRVDHVAKYK--KKEEEDEETRQRMRE 66
+NLNG ++ GRTIRVDHVA Y+ K E+ +E Q +RE
Sbjct: 106 DNLNGIKVKGRTIRVDHVANYRPPKDAEDIDEITQSLRE 144
>gi|303285404|ref|XP_003061992.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456403|gb|EEH53704.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 418
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/21 (76%), Positives = 18/21 (85%)
Query: 69 GVCRAFQRGECTRGDGCKFSH 89
G C AFQ+GECTRGD C+FSH
Sbjct: 397 GTCYAFQKGECTRGDACRFSH 417
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 19/22 (86%)
Query: 70 VCRAFQRGECTRGDGCKFSHNE 91
VC AFQ+GECTRGD C+FSH +
Sbjct: 291 VCYAFQKGECTRGDSCRFSHGD 312
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 55 EEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFE 114
+ + +T QR C AFQ+GEC+RGD C+FSH+ A +GGG + + + +K E
Sbjct: 352 DPNAQTPQR---SSAPCYAFQKGECSRGDACRFSHDPN--AVSGGGFKASGTCYAFQKGE 406
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 18/20 (90%)
Query: 71 CRAFQRGECTRGDGCKFSHN 90
C AFQ+GECTRGD C+FSH+
Sbjct: 333 CYAFQKGECTRGDSCRFSHD 352
>gi|353242335|emb|CCA73988.1| related to RNA-binding proteins [Piriformospora indica DSM 11827]
Length = 274
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEED 57
+NLNGA++ GRT+RVDHV YK+KE D
Sbjct: 91 DNLNGAELAGRTLRVDHVQNYKQKELVD 118
>gi|147906061|ref|NP_001079913.1| RNA binding motif protein, X-linked 2 [Xenopus laevis]
gi|34783857|gb|AAH56844.1| MGC64376 protein [Xenopus laevis]
Length = 272
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 30 NNLNGAQILGRTIRVDHVAKYK--KKEEEDEETRQRMRE 66
+NLNG ++ GRTIRVDHVA Y+ K E+ +E Q +RE
Sbjct: 95 DNLNGIKLKGRTIRVDHVANYRPPKDAEDIDEITQTLRE 133
>gi|182888560|ref|NP_001107258.2| RNA-binding motif protein, X-linked 2 [Rattus norvegicus]
gi|374253659|sp|B0BN49.1|RBMX2_RAT RecName: Full=RNA-binding motif protein, X-linked 2
gi|165970686|gb|AAI58685.1| Rbmx2 protein [Rattus norvegicus]
Length = 328
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEE-EDEETRQRMREERGV 70
+N NG +I GRTIRVDHVA Y+ +E ED + R +E+G
Sbjct: 95 DNFNGIKIKGRTIRVDHVANYRAPQESEDVDDVTRELQEKGC 136
>gi|389744512|gb|EIM85695.1| hypothetical protein STEHIDRAFT_169554 [Stereum hirsutum FP-91666
SS1]
Length = 349
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGC 85
+NLNGAQ+L RT+RVDHV YK+ + + E+ EE+ + R E DG
Sbjct: 91 DNLNGAQVLERTLRVDHVKNYKQPKNKGEDGEWVESEEQSLN---ARPEIIVDDGA 143
>gi|328876029|gb|EGG24393.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 280
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 20/23 (86%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKK 52
+NLNG +ILGRTIRVDHV Y+K
Sbjct: 92 DNLNGVKILGRTIRVDHVKDYRK 114
>gi|355705153|gb|EHH31078.1| RNA-binding motif protein, X-linked 2, partial [Macaca mulatta]
Length = 321
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ TRQ
Sbjct: 94 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRQ 129
>gi|355757697|gb|EHH61222.1| RNA-binding motif protein, X-linked 2 [Macaca fascicularis]
Length = 334
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ TRQ
Sbjct: 107 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRQ 142
>gi|308805450|ref|XP_003080037.1| putative PMS2 postmeiotic segregation incre (ISS) [Ostreococcus
tauri]
gi|116058496|emb|CAL53685.1| putative PMS2 postmeiotic segregation incre (ISS) [Ostreococcus
tauri]
Length = 1013
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 70 VCRAFQRGECTRGDGCKFSHNEQRAANTGG--GPQDRSSRWG 109
VC AFQ G C+ GD C+FSH+ + G GP + W
Sbjct: 957 VCYAFQNGNCSYGDSCRFSHDPNAPPSRPGSRGPPGKCYAWA 998
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 61 RQRMREERGVCRAFQRGECTRGDGCKFSH 89
++R E+ C AF+RGEC RGD C+FSH
Sbjct: 908 KERFGEDVPKCYAFERGECNRGDSCRFSH 936
>gi|426397384|ref|XP_004064898.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Gorilla gorilla
gorilla]
Length = 322
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ TRQ
Sbjct: 95 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRQ 130
>gi|410989439|ref|XP_004000969.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Felis catus]
Length = 507
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 6/48 (12%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQRMREERGVCRAF 74
+N NG +I GRTIRVDHV+ Y K EE D+ T++ +E+G C AF
Sbjct: 276 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDMTKE--LQEKG-CGAF 320
>gi|412993013|emb|CCO16546.1| conserved hypothetical protein [Bathycoccus prasinos]
Length = 266
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 20/34 (58%)
Query: 58 EETRQRMREERGVCRAFQRGECTRGDGCKFSHNE 91
E T VC A QRGECTRGD CKFSH E
Sbjct: 160 EPTYGGGGGGAPVCYAHQRGECTRGDSCKFSHEE 193
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 70 VCRAFQRGECTRGDGCKFSHNEQRAANTGGG 100
VC AF +GECTRGD C+F+H++ A G
Sbjct: 215 VCFAFLKGECTRGDSCRFAHDKNAAPPKASG 245
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 61 RQRMREERGVCRAFQRGECTRGDGCKFSHNEQ 92
+ R E++ C A++RGECTRG+ C+FSH +
Sbjct: 129 KARFGEDKPKCYAYERGECTRGENCRFSHGSE 160
>gi|410212532|gb|JAA03485.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410251714|gb|JAA13824.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410308778|gb|JAA32989.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
gi|410333627|gb|JAA35760.1| RNA binding motif protein, X-linked 2 [Pan troglodytes]
Length = 322
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ TRQ
Sbjct: 95 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRQ 130
>gi|332226384|ref|XP_003262369.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Nomascus
leucogenys]
Length = 322
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ TRQ
Sbjct: 95 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRQ 130
>gi|388453455|ref|NP_001253777.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|380813648|gb|AFE78698.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|383419077|gb|AFH32752.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
gi|384947606|gb|AFI37408.1| RNA-binding motif protein, X-linked 2 [Macaca mulatta]
Length = 322
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ TRQ
Sbjct: 95 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRQ 130
>gi|351699029|gb|EHB01948.1| RNA-binding motif protein, X-linked 2 [Heterocephalus glaber]
Length = 270
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDE-ETRQRMREERGV 70
+N NG +I GRTIRVDHV+ Y+ +E DE + R +E+G
Sbjct: 39 DNFNGIKIKGRTIRVDHVSNYRAPKESDEMDDVTRQLQEKGC 80
>gi|402911397|ref|XP_003919621.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Papio anubis]
Length = 322
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ TRQ
Sbjct: 95 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRQ 130
>gi|225554554|gb|EEH02851.1| RNA binding domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 276
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEE 56
+NL GA ILGR IRVDH A+YK+KEEE
Sbjct: 92 DNLGGATILGRMIRVDH-ARYKRKEEE 117
>gi|240277136|gb|EER40645.1| RNA binding domain-containing protein [Ajellomyces capsulatus H143]
gi|325093957|gb|EGC47267.1| RNA binding domain-containing protein [Ajellomyces capsulatus H88]
Length = 276
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEE 56
+NL GA ILGR IRVDH A+YK+KEEE
Sbjct: 92 DNLGGATILGRMIRVDH-ARYKRKEEE 117
>gi|426258338|ref|XP_004022771.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Ovis aries]
Length = 461
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKK---EEEDEETRQRMREERGV 70
+N NG +I GRTIRVDHV+ Y+ EE DE TR+ +ERG
Sbjct: 193 DNFNGIKIKGRTIRVDHVSNYRLPEDSEEMDEVTRE--LQERGC 234
>gi|410056965|ref|XP_003954131.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2, partial [Pan troglodytes]
Length = 323
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ TRQ
Sbjct: 67 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRQ 102
>gi|239612039|gb|EEQ89026.1| U2 snRNP component IST3 [Ajellomyces dermatitidis ER-3]
Length = 258
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEEE 56
+NL GA +LGR IRVDHV +YK+KEEE
Sbjct: 69 LAVDNLGGATVLGRMIRVDHV-RYKRKEEE 97
>gi|119632204|gb|EAX11799.1| RNA binding motif protein, X-linked 2, isoform CRA_a [Homo sapiens]
Length = 321
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ TRQ
Sbjct: 94 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEIDDVTRQ 129
>gi|348552954|ref|XP_003462292.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Cavia
porcellus]
Length = 388
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDE 58
+N NG +I GRTIRVDHV+ Y+ +E DE
Sbjct: 147 DNFNGIKIKGRTIRVDHVSNYRAPKESDE 175
>gi|148697139|gb|EDL29086.1| RNA binding motif protein, X-linked 2, isoform CRA_b [Mus
musculus]
Length = 278
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEE-EDEETRQRMREERGV 70
+N NG +I GRTIRVDHV+ Y+ +E ED + R +E+G
Sbjct: 44 LAVDNFNGIKIKGRTIRVDHVSNYRAPQESEDVDDVTRELQEKGC 88
>gi|118600973|ref|NP_057108.2| RNA-binding motif protein, X-linked 2 [Homo sapiens]
gi|62512110|sp|Q9Y388.2|RBMX2_HUMAN RecName: Full=RNA-binding motif protein, X-linked 2
gi|4938275|emb|CAB43745.1| hypothetical protein [Homo sapiens]
gi|62020769|gb|AAH33750.1| RNA binding motif protein, X-linked 2 [Homo sapiens]
gi|119632205|gb|EAX11800.1| RNA binding motif protein, X-linked 2, isoform CRA_b [Homo sapiens]
gi|158259171|dbj|BAF85544.1| unnamed protein product [Homo sapiens]
Length = 322
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ TRQ
Sbjct: 95 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEIDDVTRQ 130
>gi|344286268|ref|XP_003414881.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Loxodonta
africana]
Length = 401
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQRMREERGV 70
+N NG +I GRTIRVDHV+ Y K EE D+ TR+ + GV
Sbjct: 169 DNFNGIKIKGRTIRVDHVSNYRAPKDSEELDDVTRELQEKGCGV 212
>gi|5531845|gb|AAD44497.1| RNA-binding protein [Homo sapiens]
Length = 276
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ TRQ
Sbjct: 95 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEIDDVTRQ 130
>gi|426259210|ref|XP_004023193.1| PREDICTED: RNA-binding motif protein, X-linked 2-like, partial
[Ovis aries]
Length = 304
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYK---KKEEEDEETRQRMREERGV 70
+N NG +I GRTIRVDHV+ Y+ EE DE TR+ +ERG
Sbjct: 34 LAVDNFNGIKIKGRTIRVDHVSNYRLPEDSEEMDEVTRE--LQERGC 78
>gi|148697138|gb|EDL29085.1| RNA binding motif protein, X-linked 2, isoform CRA_a [Mus musculus]
Length = 296
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEE-EDEETRQRMREERGV 70
+N NG +I GRTIRVDHV+ Y+ +E ED + R +E+G
Sbjct: 62 LAVDNFNGIKIKGRTIRVDHVSNYRAPQESEDVDDVTRELQEKGC 106
>gi|393215896|gb|EJD01387.1| hypothetical protein FOMMEDRAFT_158528 [Fomitiporia mediterranea
MF3/22]
Length = 361
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGV 70
+NLNGA++L RT+RVDHV YK+ + + E+ + REE+ +
Sbjct: 91 DNLNGAKVLERTLRVDHVRNYKQPKVKGEDGEWQEREEQSL 131
>gi|327352804|gb|EGE81661.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 278
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEE 56
+NL GA +LGR IRVDHV +YK+KEEE
Sbjct: 92 DNLGGATVLGRMIRVDHV-RYKRKEEE 117
>gi|296470918|tpg|DAA13033.1| TPA: RNA binding motif protein, X-linked 2-like protein [Bos
taurus]
Length = 417
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKK---EEEDEETRQRMREERGV 70
+N NG +I GRTIRVDHV+ Y+ EE DE TR+ +ERG
Sbjct: 182 DNFNGIKIKGRTIRVDHVSNYRLPEDSEEMDEVTRE--LQERGC 223
>gi|375268714|ref|NP_001243518.1| RNA binding motif protein, X-linked 2 [Bos taurus]
gi|296471256|tpg|DAA13371.1| TPA: RNA binding motif protein, X-linked 2-like protein [Bos
taurus]
Length = 358
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKK---EEEDEETRQRMREERGV 70
+N NG +I GRTIRVDHV+ Y+ EE DE TR+ +ERG
Sbjct: 115 DNFNGIKIKGRTIRVDHVSNYRLPEDSEEMDEVTRE--LQERGC 156
>gi|27734072|ref|NP_775552.1| RNA-binding motif protein, X-linked 2 [Mus musculus]
gi|61230302|sp|Q8R0F5.1|RBMX2_MOUSE RecName: Full=RNA-binding motif protein, X-linked 2
gi|20071694|gb|AAH26976.1| RNA binding motif protein, X-linked 2 [Mus musculus]
gi|26345092|dbj|BAC36195.1| unnamed protein product [Mus musculus]
gi|74207503|dbj|BAE40004.1| unnamed protein product [Mus musculus]
Length = 326
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKKKEE-EDEETRQRMREERGV 70
+N NG +I GRTIRVDHV+ Y+ +E ED + R +E+G
Sbjct: 92 LAVDNFNGIKIKGRTIRVDHVSNYRAPQESEDVDDVTRELQEKGC 136
>gi|145348211|ref|XP_001418549.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578778|gb|ABO96842.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 234
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 61 RQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAA 95
++R E+ C AF+RGEC RGD C+FSH AA
Sbjct: 129 KERFGEDVPKCYAFERGECDRGDSCRFSHGPGSAA 163
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
Query: 33 NGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSH 89
NG G + R H + +R R G C AF G CTRGD C+FSH
Sbjct: 184 NGNCSYGDSCRFSH-------DPNAPPSRPGSRGPAGKCYAFAEGNCTRGDSCRFSH 233
>gi|444517993|gb|ELV11894.1| RNA-binding motif protein, X-linked 2, partial [Tupaia chinensis]
Length = 323
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKK-KEEEDEETRQRMREERGV 70
+N NG +I GRTIRVDHV+ Y+ K+ E+ + R+ +E+G
Sbjct: 89 LAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRVLQEKGC 133
>gi|330864692|ref|NP_001193477.1| RNA-binding motif protein, X-linked 2-like [Bos taurus]
Length = 330
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKK---EEEDEETRQRMREERGV 70
+N NG +I GRTIRVDHV+ Y+ EE DE TR+ +ERG
Sbjct: 95 DNFNGIKIKGRTIRVDHVSNYRLPEDSEEMDEVTRE--LQERGC 136
>gi|109077776|ref|XP_001110036.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Macaca mulatta]
Length = 322
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQRMREERG 69
+N NG ++ GRTIRVDHV+ Y K EE D+ T++ + RG
Sbjct: 95 DNFNGIKVKGRTIRVDHVSNYRAPKSSEEMDDVTKELHKGSRG 137
>gi|355750033|gb|EHH54371.1| hypothetical protein EGM_15194 [Macaca fascicularis]
Length = 310
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQRMREERG 69
+N NG ++ GRTIRVDHV+ Y K EE D+ T++ + RG
Sbjct: 95 DNFNGIKVKGRTIRVDHVSNYRAPKSSEEMDDVTKELHKGSRG 137
>gi|296236404|ref|XP_002763305.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Callithrix
jacchus]
Length = 342
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ TR+
Sbjct: 115 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRE 150
>gi|431908562|gb|ELK12156.1| RNA-binding motif protein, X-linked 2 [Pteropus alecto]
Length = 346
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQRMREERGV 70
+N NG +I GRTIRVDHV+ Y K EE D+ TR+ E G
Sbjct: 115 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTRELQDEGCGA 158
>gi|302142767|emb|CBI19970.3| unnamed protein product [Vitis vinifera]
Length = 994
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 KYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRW 108
+Y + + + E R+ R +C+ F G+C GD C+FSH++ + G P+D +W
Sbjct: 431 RYDRHDRDHERKREPHRVGGILCKYFAMGKCFNGDRCRFSHDDPPCDSPEGRPRD--GKW 488
Query: 109 GH 110
GH
Sbjct: 489 GH 490
>gi|291240642|ref|XP_002740229.1| PREDICTED: CG10466-like [Saccoglossus kowalevskii]
Length = 281
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYKK 52
+N NG ++LGR +RVDHVA Y+K
Sbjct: 36 LAVDNFNGTKLLGRILRVDHVADYRK 61
>gi|225457763|ref|XP_002278177.1| PREDICTED: uncharacterized protein LOC100267803 [Vitis vinifera]
Length = 913
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 KYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRW 108
+Y + + + E R+ R +C+ F G+C GD C+FSH++ + G P+D +W
Sbjct: 306 RYDRHDRDHERKREPHRVGGILCKYFAMGKCFNGDRCRFSHDDPPCDSPEGRPRD--GKW 363
Query: 109 GH 110
GH
Sbjct: 364 GH 365
>gi|147801246|emb|CAN61511.1| hypothetical protein VITISV_013331 [Vitis vinifera]
Length = 913
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 KYKKKEEEDEETRQRMREERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRW 108
+Y + + + E R+ R +C+ F G+C GD C+FSH++ + G P+D +W
Sbjct: 306 RYDRHDRDHERKREPHRVGGILCKYFAMGKCFNGDRCRFSHDDPPCDSPEGRPRD--GKW 363
Query: 109 GH 110
GH
Sbjct: 364 GH 365
>gi|308803152|ref|XP_003078889.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
gi|116057342|emb|CAL51769.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
Length = 269
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 8 LTFTSAASLSISLKAIFSRFLPNNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMRE- 66
L F A+ S + A+ + LGR IR + + +K +E QR +
Sbjct: 87 LAFVKYATQSEADAAV-------DGGVGDFLGREIRCEIATQQRKSRDEMRSGSQRRDDR 139
Query: 67 -----ERGVCRAFQRGECTRGDGCKFSHNE 91
RG+C ++ G+C RGD C+F+H+E
Sbjct: 140 PYAPRSRGMCYDWKAGKCDRGDSCRFAHSE 169
>gi|343887401|ref|NP_001230600.1| RNA binding motif protein, X-linked 2 [Sus scrofa]
Length = 329
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQRMREERGV 70
+N NG +I GRTIRVDHV+ Y K EE D+ T++ +ERG
Sbjct: 92 LAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEETDDVTKE--LQERGC 136
>gi|298708119|emb|CBJ30461.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 402
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY-------KKKEEEDEETRQRMREERGVCRAFQRGECTRG 82
+N NG +LGRTIRVDH KY +K E+EDEE R ++ G G
Sbjct: 92 DNFNGIDLLGRTIRVDHKHKYSLPAEVREKAEKEDEERVARGEAPSEKGPQWRPGVAYEG 151
Query: 83 DGCKFSHNEQRAANTGGGPQ 102
SHN + + P+
Sbjct: 152 KQLATSHNFHKGVDVFAKPE 171
>gi|397620275|gb|EJK65638.1| hypothetical protein THAOC_13484 [Thalassiosira oceanica]
Length = 227
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/22 (68%), Positives = 19/22 (86%)
Query: 30 NNLNGAQILGRTIRVDHVAKYK 51
+N GAQ+LGRT+RVDHV +YK
Sbjct: 93 DNFTGAQVLGRTLRVDHVERYK 114
>gi|432093575|gb|ELK25559.1| RNA-binding motif protein, X-linked 2 [Myotis davidii]
Length = 337
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 30 NNLNGAQILGRTIRVDHVAKYK-KKEEEDEETRQRMREERGVCRA 73
+N NG +I GRTIRVDHV+ Y+ KE E+ + + +E+G C A
Sbjct: 95 DNFNGIKIKGRTIRVDHVSNYRTPKESEEMDIVTKELQEKG-CGA 138
>gi|426192446|gb|EKV42382.1| hypothetical protein AGABI2DRAFT_195726 [Agaricus bisporus var.
bisporus H97]
Length = 298
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEETRQRMREERGV 70
+NLNGA++L RT+RVDHV YK+ + ++E+ EE+ +
Sbjct: 91 DNLNGAKVLERTLRVDHVRNYKQPKVKNEDGEWVDAEEQSL 131
>gi|409079599|gb|EKM79960.1| hypothetical protein AGABI1DRAFT_113205 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 298
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 25/30 (83%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 59
+NLNGA++L RT+RVDHV YK+ + ++E+
Sbjct: 91 DNLNGAKVLERTLRVDHVRNYKQPKVKNED 120
>gi|432900542|ref|XP_004076708.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Oryzias
latipes]
Length = 255
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 30 NNLNGAQILGRTIRVDHVAKYK--KKEEEDEETRQRMREE 67
+N NG +I GRTIRVDHV Y+ K E+ ++ +R+RE+
Sbjct: 95 DNFNGIKIKGRTIRVDHVKNYRPPKDGEDIDDVTKRLRED 134
>gi|68448493|ref|NP_001020337.1| RNA-binding motif protein, X-linked 2 [Danio rerio]
gi|67678309|gb|AAH96985.1| RNA binding motif protein, X-linked 2 [Danio rerio]
Length = 434
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYK 51
+N NG +I GRTIRVDHVA Y+
Sbjct: 92 LAVDNFNGIKIKGRTIRVDHVANYR 116
>gi|299745119|ref|XP_001831487.2| hypothetical protein CC1G_09016 [Coprinopsis cinerea okayama7#130]
gi|298406441|gb|EAU90334.2| hypothetical protein CC1G_09016 [Coprinopsis cinerea okayama7#130]
Length = 1424
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 70 VCRAFQRGECTRGDGCKFSH----------NEQRA-ANTGGGPQDRSSRWGHEKFEGFSW 118
+CR FQ+G C GD C+ SH + RA AN G P + + WG +W
Sbjct: 432 ICRHFQKGHCIFGDKCQNSHIMHSDIQNYRTKARADANGWGAPAEEDNGWGVSSGNPDAW 491
Query: 119 GKND 122
G++D
Sbjct: 492 GESD 495
>gi|358419810|ref|XP_003584333.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Bos
taurus]
Length = 287
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYK---KKEEEDEETRQRMREERGV 70
++ NG +I GRTIRVDHV+ Y+ EE DE TR+ +ERG
Sbjct: 41 LAVDSFNGIKIKGRTIRVDHVSNYRLPEDSEEMDEVTRE--LQERGC 85
>gi|121713176|ref|XP_001274199.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
gi|119402352|gb|EAW12773.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
Length = 284
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 25/29 (86%), Gaps = 1/29 (3%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDE 58
+NL GA +LGR +RVDH A+YKK+++E+E
Sbjct: 92 DNLGGATVLGRILRVDH-ARYKKRDDEEE 119
>gi|357144602|ref|XP_003573350.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
[Brachypodium distachyon]
Length = 931
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 22/135 (16%)
Query: 65 REERGVCRAFQRGECTRGDGCKFSHNEQRAANTGGGPQDRSSRWGHEKFEG---FSWGKN 121
RE + C+ F G C RG C + H E + G GP D ++ + G +WG+
Sbjct: 362 RENKKPCKFFAEGRCRRGQSCPYLHEETPQSQMGLGPPDEPPKYSDARTTGGNYSNWGEQ 421
Query: 122 DSSSRAT---------------GSGRVALEGNPNQSDRREEKRSIRHDHREKPREDHGRR 166
+++ + G+GRV + R+ K + R ++ P+ED G +
Sbjct: 422 TNATHGSSHILSRDDRENPGSQGTGRVDTG---YEYKNRQLKEAGRSQYQIIPQEDFGSQ 478
Query: 167 -EDKRSRRHSDNNEF 180
++K+ S +F
Sbjct: 479 AQNKQEMTASKQPQF 493
>gi|403279255|ref|XP_003931175.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Saimiri
boliviensis boliviensis]
Length = 342
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ +R+
Sbjct: 115 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVSRE 150
>gi|345807592|ref|XP_549256.3| PREDICTED: RNA-binding motif protein, X-linked 2 [Canis lupus
familiaris]
Length = 336
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ T++
Sbjct: 95 DNFNGIKIKGRTIRVDHVSNYRAPKDSEEMDDVTKE 130
>gi|345562988|gb|EGX45994.1| hypothetical protein AOL_s00112g11 [Arthrobotrys oligospora ATCC
24927]
Length = 358
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 25 SRFLPNNLNGAQILGRTIRVDHVAKYKKKE 54
+ +NL GA +LGRTIRVDH A+YK KE
Sbjct: 87 TNLAVDNLTGAVVLGRTIRVDH-AEYKHKE 115
>gi|156086052|ref|XP_001610435.1| RNA-binding protein [Babesia bovis T2Bo]
gi|154797688|gb|EDO06867.1| RNA-binding protein, putative [Babesia bovis]
Length = 248
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEET 60
+N NG+ +LGR IRVDHV YK E ++E
Sbjct: 98 DNFNGSTLLGRRIRVDHVLDYKAPVEYEDEV 128
>gi|50417226|gb|AAH78245.1| Rbmx2 protein [Danio rerio]
Length = 358
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYK 51
+N NG +I GRTIRVDHVA Y+
Sbjct: 92 LAVDNFNGIKIKGRTIRVDHVANYR 116
>gi|440898620|gb|ELR50076.1| RNA-binding motif protein, X-linked 2, partial [Bos grunniens
mutus]
Length = 330
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKK---EEEDEETRQRMREERGV 70
++ NG +I GRTIRVDHV+ Y+ EE DE TR+ +ERG
Sbjct: 95 DSFNGIKIKGRTIRVDHVSNYRLPEDSEEMDEVTRE--LQERGC 136
>gi|301766430|ref|XP_002918652.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Ailuropoda
melanoleuca]
Length = 325
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ T++
Sbjct: 95 DNFNGIKIKGRTIRVDHVSNYRAPKDLEEIDDMTKE 130
>gi|281351269|gb|EFB26853.1| hypothetical protein PANDA_007127 [Ailuropoda melanoleuca]
Length = 334
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 30 NNLNGAQILGRTIRVDHVAKY---KKKEEEDEETRQ 62
+N NG +I GRTIRVDHV+ Y K EE D+ T++
Sbjct: 104 DNFNGIKIKGRTIRVDHVSNYRAPKDLEEIDDMTKE 139
>gi|395545903|ref|XP_003775408.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked
2 [Sarcophilus harrisii]
Length = 310
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 30 NNLNGAQILGRTIRVDHVAKYK-KKEEEDEETRQRMREERGV 70
+N NG +I GRTIRVDHVA Y+ K+ ++ + R E+G
Sbjct: 76 DNFNGIKIRGRTIRVDHVANYRPPKDSKNLDDVTRALREKGC 117
>gi|410929842|ref|XP_003978308.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Takifugu
rubripes]
Length = 341
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 27 FLPNNLNGAQILGRTIRVDHVAKYK--KKEEEDEETRQRMREE 67
+N NG +I GRTIRVDHV Y+ K E+ ++ + +REE
Sbjct: 92 LAVDNFNGIKIKGRTIRVDHVKDYRPPKDSEDIDDVTKILREE 134
>gi|403220621|dbj|BAM38754.1| RNA-binding motif protein, X-linked 2 [Theileria orientalis strain
Shintoku]
Length = 291
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 59
+N NG+ +LGR IRVDHV YK E ++E
Sbjct: 98 DNFNGSTLLGRRIRVDHVMDYKAPVEYEDE 127
>gi|149745621|ref|XP_001500162.1| PREDICTED: RNA-binding motif protein, X-linked 2-like [Equus
caballus]
Length = 327
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDE 58
+N NG +I GRTIRVDHV+ Y+ ++ +E
Sbjct: 95 DNFNGIKIKGRTIRVDHVSNYRAPKDSEE 123
>gi|258570729|ref|XP_002544168.1| U2 snRNP component IST3 [Uncinocarpus reesii 1704]
gi|237904438|gb|EEP78839.1| U2 snRNP component IST3 [Uncinocarpus reesii 1704]
Length = 263
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEE 56
+NL GA I+GR +RVDH+ +YK+KEEE
Sbjct: 92 DNLCGANIMGRLLRVDHM-RYKRKEEE 117
>gi|115398724|ref|XP_001214951.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
gi|114191834|gb|EAU33534.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
Length = 292
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 25/29 (86%), Gaps = 1/29 (3%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDE 58
+NL GA +LGR +RVDHV +YK++++E+E
Sbjct: 92 DNLGGATVLGRMLRVDHV-RYKRRDDEEE 119
>gi|440802669|gb|ELR23598.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 355
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 30 NNLNGAQILGRTIRVDHVAKY 50
+NLNG Q++GRT+RVDHV Y
Sbjct: 90 DNLNGIQLVGRTLRVDHVKNY 110
>gi|171683191|ref|XP_001906538.1| hypothetical protein [Podospora anserina S mat+]
gi|170941555|emb|CAP67207.1| unnamed protein product [Podospora anserina S mat+]
Length = 398
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 9/49 (18%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEED--------EETRQRMREERGV 70
+NL GA+I GR IRVDH A+YK +++ED E+ +R R E+G+
Sbjct: 114 DNLGGAEIAGRLIRVDH-ARYKARDDEDLEECKVGWEDVMRRERLEKGL 161
>gi|424513562|emb|CCO66184.1| predicted protein [Bathycoccus prasinos]
Length = 841
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 67 ERGVCRAFQRGECTRGDGCKFSHN 90
E G C AF +G C RGD C+FSH+
Sbjct: 600 EGGPCWAFAQGRCFRGDSCRFSHD 623
>gi|330928415|ref|XP_003302251.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
gi|311322479|gb|EFQ89633.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
Length = 296
Score = 37.0 bits (84), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEED 57
+NL GA I+ R IRVDH A+YK K++ED
Sbjct: 92 DNLGGANIMDRIIRVDH-ARYKPKDDED 118
>gi|348544233|ref|XP_003459586.1| PREDICTED: hypothetical protein LOC100697480 [Oreochromis
niloticus]
Length = 304
Score = 36.6 bits (83), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 30 NNLNGAQILGRTIRVDHVAKYK--KKEEEDEETRQRMREE 67
+N NG +I GRTIRVDHV Y+ K E+ ++ + +REE
Sbjct: 95 DNFNGIKIKGRTIRVDHVKDYRPPKDGEDIDDVTKHLREE 134
>gi|85116496|ref|XP_965061.1| hypothetical protein NCU02467 [Neurospora crassa OR74A]
gi|28926863|gb|EAA35825.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567120|emb|CAE76416.1| conserved hypothetical protein [Neurospora crassa]
Length = 395
Score = 36.6 bits (83), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEEDEE 59
+NL GA+I GR IRVDH A+YK +++ED E
Sbjct: 92 DNLGGAEIGGRLIRVDH-ARYKIRDDEDPE 120
>gi|189191842|ref|XP_001932260.1| U2 snRNP component IST3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973866|gb|EDU41365.1| U2 snRNP component IST3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 296
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEED 57
+NL GA I+ R IRVDH A+YK K++ED
Sbjct: 92 DNLGGANIMDRIIRVDH-ARYKPKDDED 118
>gi|119183786|ref|XP_001242884.1| hypothetical protein CIMG_06780 [Coccidioides immitis RS]
gi|392865790|gb|EAS31617.2| U2 snRNP component IST3 [Coccidioides immitis RS]
Length = 269
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 23/27 (85%), Gaps = 1/27 (3%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEE 56
+NL GA ++GR +RVDH+ +YK+KEEE
Sbjct: 92 DNLCGATVMGRLLRVDHM-RYKRKEEE 117
>gi|367041712|ref|XP_003651236.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
gi|346998498|gb|AEO64900.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
Length = 363
Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 9/49 (18%)
Query: 30 NNLNGAQILGRTIRVDHVAKYKKKEEED--------EETRQRMREERGV 70
+NL GA+I GR IRVDH A+YK +++ED E+ +R R E+G+
Sbjct: 92 DNLGGAEIGGRLIRVDH-ARYKMRDDEDLEEYKVGWEDMLRRERAEKGL 139
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.129 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,800,998,104
Number of Sequences: 23463169
Number of extensions: 167172722
Number of successful extensions: 975276
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3162
Number of HSP's successfully gapped in prelim test: 13775
Number of HSP's that attempted gapping in prelim test: 775251
Number of HSP's gapped (non-prelim): 122193
length of query: 232
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 94
effective length of database: 9,121,278,045
effective search space: 857400136230
effective search space used: 857400136230
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 74 (33.1 bits)