BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026839
(232 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224104509|ref|XP_002313460.1| predicted protein [Populus trichocarpa]
gi|222849868|gb|EEE87415.1| predicted protein [Populus trichocarpa]
Length = 232
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/231 (80%), Positives = 207/231 (89%)
Query: 1 MAFSLENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAV 60
M+ S+EN V V+NK +VRPATE +A+EAI+ALK GKVIAVPTDTLYGFACDACS EAV
Sbjct: 1 MSSSMENCHVDVQNKLEVVRPATEVYAQEAIEALKAGKVIAVPTDTLYGFACDACSLEAV 60
Query: 61 NRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLE 120
NRIYE+KGRKHTSPLAICVGDVS I FAVT++LPHGLLDSLLPGPVTV+L RGESS LE
Sbjct: 61 NRIYEMKGRKHTSPLAICVGDVSQIQHFAVTEYLPHGLLDSLLPGPVTVILRRGESSALE 120
Query: 121 KSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACV 180
KSLNPGL+S+GVRVPD NF+RV+ARGL A+ALTSANL+GQPSS+ +KDFENLW RCA V
Sbjct: 121 KSLNPGLDSVGVRVPDCNFIRVVARGLGKAVALTSANLSGQPSSLCIKDFENLWNRCAYV 180
Query: 181 YDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVEEPAA 231
YDGGVLPS RAGST+VDLTR GK+KILRPGSAKEET+AILEKHSLVEE A
Sbjct: 181 YDGGVLPSNRAGSTIVDLTRPGKYKILRPGSAKEETLAILEKHSLVEEAPA 231
>gi|255578866|ref|XP_002530287.1| Protein SUA5, putative [Ricinus communis]
gi|223530185|gb|EEF32094.1| Protein SUA5, putative [Ricinus communis]
Length = 233
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/229 (80%), Positives = 205/229 (89%), Gaps = 1/229 (0%)
Query: 1 MAFSLE-NGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEA 59
MA+SL+ + V +K G+VRPATE +AEEA++ALK GKVIAVPTDTLYGFACDACS EA
Sbjct: 1 MAWSLQRSNNVDTADKLGVVRPATELYAEEAVEALKAGKVIAVPTDTLYGFACDACSLEA 60
Query: 60 VNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNL 119
VNRIYEIKGRKHTSPLAIC+GDVSDI FAVTDHLP+GLLDSLLPG VTVVL+RGESS L
Sbjct: 61 VNRIYEIKGRKHTSPLAICIGDVSDIKHFAVTDHLPNGLLDSLLPGAVTVVLNRGESSAL 120
Query: 120 EKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCAC 179
EKSLNPGL++IGVRVPD NF+R IA GL A+ALTSANL+G+PSSV +KDFENLWE CA
Sbjct: 121 EKSLNPGLDTIGVRVPDCNFIREIAHGLGRAVALTSANLSGKPSSVCIKDFENLWEHCAY 180
Query: 180 VYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVEE 228
VYDGGVLPSGR GSTVVDL+RLGK+KILRPGSAKEET+ ILEKHSLVEE
Sbjct: 181 VYDGGVLPSGREGSTVVDLSRLGKYKILRPGSAKEETVEILEKHSLVEE 229
>gi|225435305|ref|XP_002285123.1| PREDICTED: yrdC domain-containing protein, mitochondrial [Vitis
vinifera]
gi|297746251|emb|CBI16307.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/215 (84%), Positives = 198/215 (92%)
Query: 17 GLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLA 76
G+VRPAT+AHAEEAI+A+K GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLA
Sbjct: 57 GVVRPATDAHAEEAIEAIKAGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLA 116
Query: 77 ICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPD 136
ICVGDV DI RFAVTDHLP GLL SLLPGPVTVVL RGE S +EKSLNPGL+SIGVRVPD
Sbjct: 117 ICVGDVLDIQRFAVTDHLPDGLLGSLLPGPVTVVLRRGELSIIEKSLNPGLDSIGVRVPD 176
Query: 137 SNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVV 196
+F+RVIA G E+ALALTSANL+GQPSSV +KDFENLWE CA VYDGGVLPSGRAGSTVV
Sbjct: 177 CDFIRVIAHGSETALALTSANLSGQPSSVCIKDFENLWEHCAYVYDGGVLPSGRAGSTVV 236
Query: 197 DLTRLGKFKILRPGSAKEETIAILEKHSLVEEPAA 231
DL+RLGK+KILRPGSA EET+AILE+HSL+ E AA
Sbjct: 237 DLSRLGKYKILRPGSAMEETVAILERHSLMPEAAA 271
>gi|356539446|ref|XP_003538209.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Glycine max]
Length = 290
Score = 358 bits (920), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 174/218 (79%), Positives = 196/218 (89%), Gaps = 1/218 (0%)
Query: 10 VSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGR 69
VSV+N V PAT+A+A EA++ALK GKVIAVPTDTLYGFACDACS EAVNRIYEIKGR
Sbjct: 70 VSVDN-CDTVHPATDAYAGEAVEALKAGKVIAVPTDTLYGFACDACSMEAVNRIYEIKGR 128
Query: 70 KHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLES 129
+HTSP+AICVGDVSDI RFAVTDHLPHGLLDSLLPGPVTVVL RG+SS LE+SLNPG +S
Sbjct: 129 RHTSPVAICVGDVSDIARFAVTDHLPHGLLDSLLPGPVTVVLKRGDSSILERSLNPGFDS 188
Query: 130 IGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSG 189
IGVRVPD NF+R+IARG +ALALTSANL+GQPSS+S+KDFENLWE CA VYDGG++PS
Sbjct: 189 IGVRVPDCNFIRIIARGSGTALALTSANLSGQPSSLSIKDFENLWEHCAFVYDGGLIPSS 248
Query: 190 RAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
RAGST+VDLT K++ILRPGSAKEET+AILEKHS VE
Sbjct: 249 RAGSTIVDLTTPHKYRILRPGSAKEETVAILEKHSFVE 286
>gi|449462123|ref|XP_004148791.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Cucumis sativus]
Length = 281
Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 171/228 (75%), Positives = 197/228 (86%)
Query: 3 FSLENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNR 62
+SLE + VEN +RPA+EA A+EA ALK GKVIAVPTDTLYG ACDACS+EAV+R
Sbjct: 52 WSLEKCCMRVENCLQALRPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSAEAVHR 111
Query: 63 IYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKS 122
IYEIKGRK TSPLAICVGDVSDI RFAVTDHLP GLLDSLLPGPVTVVL RGESS L+KS
Sbjct: 112 IYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGESSVLDKS 171
Query: 123 LNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYD 182
LNPGL+SIGVRVPD++F+R+I+R E+ALALTSANL+GQPSSV V DFENLW+ CA VYD
Sbjct: 172 LNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQHCAYVYD 231
Query: 183 GGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVEEPA 230
GGVLP+GRAGST++DLT G FKI+R GSA+E+TIA LE++SL+E A
Sbjct: 232 GGVLPAGRAGSTIIDLTEQGTFKIIRAGSAEEQTIATLERYSLLEAAA 279
>gi|357472217|ref|XP_003606393.1| YrdC domain-containing protein [Medicago truncatula]
gi|355507448|gb|AES88590.1| YrdC domain-containing protein [Medicago truncatula]
Length = 462
Score = 345 bits (886), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 166/210 (79%), Positives = 187/210 (89%)
Query: 1 MAFSLENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAV 60
MA+S+E + ++ K G+V PAT+A+A EA++ LK GKVIAVPTDTLYGFACDACS EAV
Sbjct: 1 MAWSMERCDLGLDVKTGVVHPATDAYAAEAVETLKAGKVIAVPTDTLYGFACDACSLEAV 60
Query: 61 NRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLE 120
NRIYEIKGRKHTSPLAICVGDVSDINRFA+TDHLPHGLLDSLLPGPVTVVLSRGESS LE
Sbjct: 61 NRIYEIKGRKHTSPLAICVGDVSDINRFALTDHLPHGLLDSLLPGPVTVVLSRGESSALE 120
Query: 121 KSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACV 180
+SLNPG +SIGVRVPD NF+R+IARG +ALALTSANL+GQPSSV +KDFE LWE CA V
Sbjct: 121 RSLNPGFDSIGVRVPDCNFIRLIARGSGTALALTSANLSGQPSSVCIKDFEKLWEHCASV 180
Query: 181 YDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
YDGG+LPSGRAGSTVVDL+ K+KILRPG
Sbjct: 181 YDGGLLPSGRAGSTVVDLSTPYKYKILRPG 210
>gi|356544602|ref|XP_003540738.1| PREDICTED: LOW QUALITY PROTEIN: yrdC domain-containing protein,
mitochondrial-like [Glycine max]
Length = 227
Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 171/221 (77%), Positives = 192/221 (86%), Gaps = 3/221 (1%)
Query: 9 QVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKG 68
VSV+N + +V PAT+A+A EA++ALK G VIAVPTDTLYGFACDACS EAVNRIYEIKG
Sbjct: 4 SVSVDN-SDMVHPATDAYAGEAVEALKAGXVIAVPTDTLYGFACDACSLEAVNRIYEIKG 62
Query: 69 RKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRG--ESSNLEKSLNPG 126
R+HTSPLAICVGDVSDI RFAVTDHLPHGLLD LLPGPV VVL RG ESS LE+SLNPG
Sbjct: 63 RRHTSPLAICVGDVSDIARFAVTDHLPHGLLDCLLPGPVIVVLKRGXXESSILERSLNPG 122
Query: 127 LESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL 186
+SIGVRVPD NF+R+IA G +ALALTSANL+GQ S++S+KDFENLWE C VYDGG++
Sbjct: 123 FDSIGVRVPDCNFIRIIACGSGTALALTSANLSGQSSTLSIKDFENLWEHCXFVYDGGLI 182
Query: 187 PSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
PS AGSTVVDLT K+KILRPGSAKEET+AILEKHSLVE
Sbjct: 183 PSSLAGSTVVDLTTPHKYKILRPGSAKEETVAILEKHSLVE 223
>gi|297793617|ref|XP_002864693.1| hypothetical protein ARALYDRAFT_358267 [Arabidopsis lyrata subsp.
lyrata]
gi|297310528|gb|EFH40952.1| hypothetical protein ARALYDRAFT_358267 [Arabidopsis lyrata subsp.
lyrata]
Length = 284
Score = 338 bits (868), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 165/225 (73%), Positives = 191/225 (84%)
Query: 1 MAFSLENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAV 60
M +SLE + V + + LV PATEA+A+EAI+A+K+ KVIAVPTDTLYGFACDACS EAV
Sbjct: 50 MVWSLERAETCVVSNSCLVHPATEAYAQEAIEAIKSEKVIAVPTDTLYGFACDACSLEAV 109
Query: 61 NRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLE 120
NRIYEIKGRK TSPLAICVGDV DI R A T+HLPHGLLDSLLPGPVT+VL RGESS LE
Sbjct: 110 NRIYEIKGRKLTSPLAICVGDVLDIKRVATTNHLPHGLLDSLLPGPVTIVLQRGESSILE 169
Query: 121 KSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACV 180
KSLNPG+ +IGVRVPD F+R ++RG S LALTSANL+G SSV VKDFENLW+ CA V
Sbjct: 170 KSLNPGIGTIGVRVPDCEFIREVSRGSGSVLALTSANLSGDRSSVCVKDFENLWQHCAYV 229
Query: 181 YDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSL 225
YDGG+LPSGRAGST+VDLT+ GK+KI+RPGSAK+ T+ ILEK+ L
Sbjct: 230 YDGGLLPSGRAGSTIVDLTKAGKYKIIRPGSAKQATVVILEKYLL 274
>gi|9759323|dbj|BAB09832.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 162/219 (73%), Positives = 188/219 (85%)
Query: 1 MAFSLENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAV 60
M +SLE + V +K+ LV PATEA+A+EAI+A+K+ KVIAVPTDTLYGFACDACS EAV
Sbjct: 1 MVWSLERAETCVVSKSCLVHPATEAYAQEAIEAIKSEKVIAVPTDTLYGFACDACSLEAV 60
Query: 61 NRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLE 120
+RIYEIKGRK TSPLAICVGDV DI R A T HLPHGLLDSLLPGPVT+VL RGESS LE
Sbjct: 61 SRIYEIKGRKLTSPLAICVGDVLDIKRVATTSHLPHGLLDSLLPGPVTLVLQRGESSILE 120
Query: 121 KSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACV 180
KSLNPG+ +IGVRVPD F+R ++RG S LALTSANL+G SSV VKDFENLW+ CA V
Sbjct: 121 KSLNPGIGTIGVRVPDCEFIREVSRGSGSVLALTSANLSGDRSSVCVKDFENLWQHCAYV 180
Query: 181 YDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAI 219
YDGG+LPSGRAGST+VDLT++GK+KI+RPGSAK+ T+AI
Sbjct: 181 YDGGLLPSGRAGSTIVDLTKVGKYKIIRPGSAKQATVAI 219
>gi|42573748|ref|NP_974970.1| DHBP synthase RibB-like alpha/beta domain-containing protein
[Arabidopsis thaliana]
gi|332009969|gb|AED97352.1| DHBP synthase RibB-like alpha/beta domain-containing protein
[Arabidopsis thaliana]
Length = 288
Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 162/219 (73%), Positives = 188/219 (85%)
Query: 1 MAFSLENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAV 60
M +SLE + V +K+ LV PATEA+A+EAI+A+K+ KVIAVPTDTLYGFACDACS EAV
Sbjct: 50 MVWSLERAETCVVSKSCLVHPATEAYAQEAIEAIKSEKVIAVPTDTLYGFACDACSLEAV 109
Query: 61 NRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLE 120
+RIYEIKGRK TSPLAICVGDV DI R A T HLPHGLLDSLLPGPVT+VL RGESS LE
Sbjct: 110 SRIYEIKGRKLTSPLAICVGDVLDIKRVATTSHLPHGLLDSLLPGPVTLVLQRGESSILE 169
Query: 121 KSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACV 180
KSLNPG+ +IGVRVPD F+R ++RG S LALTSANL+G SSV VKDFENLW+ CA V
Sbjct: 170 KSLNPGIGTIGVRVPDCEFIREVSRGSGSVLALTSANLSGDRSSVCVKDFENLWQHCAYV 229
Query: 181 YDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAI 219
YDGG+LPSGRAGST+VDLT++GK+KI+RPGSAK+ T+AI
Sbjct: 230 YDGGLLPSGRAGSTIVDLTKVGKYKIIRPGSAKQATVAI 268
>gi|242036585|ref|XP_002465687.1| hypothetical protein SORBIDRAFT_01g043750 [Sorghum bicolor]
gi|241919541|gb|EER92685.1| hypothetical protein SORBIDRAFT_01g043750 [Sorghum bicolor]
Length = 275
Score = 313 bits (803), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 155/222 (69%), Positives = 179/222 (80%)
Query: 6 ENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYE 65
EN + A + PA + H +A A+ G+VIAVPTDT+YGFACDACS+ AVNRIYE
Sbjct: 52 ENTARRIYATAENIFPAMKDHVLKATDAINRGEVIAVPTDTIYGFACDACSAGAVNRIYE 111
Query: 66 IKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP 125
IKGR T PLAICV DVSDI+RFA+ DHLPHGLLDSLLPGPVTVVL RGE+S LE+SLNP
Sbjct: 112 IKGRIQTRPLAICVADVSDISRFALVDHLPHGLLDSLLPGPVTVVLKRGENSILERSLNP 171
Query: 126 GLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGV 185
GL+SIGVRVPD +F+R IARG SALALTSANL+GQPSSVSVKDFE LW C+CV+DGGV
Sbjct: 172 GLDSIGVRVPDLDFIRSIARGAGSALALTSANLSGQPSSVSVKDFEGLWPHCSCVFDGGV 231
Query: 186 LPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
LPSGRAGST+VDL G +KILR GS+++ET A+L K VE
Sbjct: 232 LPSGRAGSTIVDLITPGVYKILRDGSSRKETAAVLGKFGFVE 273
>gi|125542795|gb|EAY88934.1| hypothetical protein OsI_10418 [Oryza sativa Indica Group]
Length = 274
Score = 312 bits (799), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 151/216 (69%), Positives = 178/216 (82%)
Query: 12 VENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKH 71
+E A + PAT H +AI ++ G+VIAVPTDT+YGFACDACS+EAVNRIYEIKGR
Sbjct: 57 IEATAEHILPATNDHVMKAIDSINRGQVIAVPTDTIYGFACDACSAEAVNRIYEIKGRVQ 116
Query: 72 TSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIG 131
T PLAICV DV DI+RFAV DHLPHGLLDSLLPGPVTVVL RG +S LE+SLNPGLESIG
Sbjct: 117 TRPLAICVADVPDISRFAVVDHLPHGLLDSLLPGPVTVVLKRGNNSILERSLNPGLESIG 176
Query: 132 VRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRA 191
VRVPD +F+R I+RG SALALTSANL+G+PSSV+VKDFE+LW C+ V+DGG+LPSGRA
Sbjct: 177 VRVPDFDFIRAISRGAGSALALTSANLSGRPSSVNVKDFEDLWPHCSYVFDGGILPSGRA 236
Query: 192 GSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
GST+VDL G +KILR GS+++ET A+L K VE
Sbjct: 237 GSTIVDLITPGVYKILRDGSSRQETTAVLGKFGFVE 272
>gi|108706710|gb|ABF94505.1| yrdC protein, putative, expressed [Oryza sativa Japonica Group]
gi|125585293|gb|EAZ25957.1| hypothetical protein OsJ_09812 [Oryza sativa Japonica Group]
gi|215695443|dbj|BAG90626.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 274
Score = 312 bits (799), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 151/216 (69%), Positives = 177/216 (81%)
Query: 12 VENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKH 71
+E A + PAT H +AI ++ G+VIAVPTDT+YGFACDACS+EAVNRIYEIKGR
Sbjct: 57 IEATAEHILPATNDHVMKAIDSINRGQVIAVPTDTIYGFACDACSAEAVNRIYEIKGRVQ 116
Query: 72 TSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIG 131
T PLAICV DV DI+RFAV DHLPHGLLDSLLPGPVTVVL RG +S LE+SLNPGLESIG
Sbjct: 117 TRPLAICVADVPDISRFAVVDHLPHGLLDSLLPGPVTVVLKRGNNSILERSLNPGLESIG 176
Query: 132 VRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRA 191
VRVPD +F+R I+RG SALALTSANL+G PSSV+VKDFE+LW C+ V+DGG+LPSGRA
Sbjct: 177 VRVPDFDFIRAISRGAGSALALTSANLSGHPSSVNVKDFEDLWPHCSYVFDGGILPSGRA 236
Query: 192 GSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
GST+VDL G +KILR GS+++ET A+L K VE
Sbjct: 237 GSTIVDLITPGVYKILRDGSSRQETTAVLGKFGFVE 272
>gi|223946371|gb|ACN27269.1| unknown [Zea mays]
gi|414865373|tpg|DAA43930.1| TPA: ischemia/reperfusion inducible protein [Zea mays]
Length = 275
Score = 310 bits (794), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 153/222 (68%), Positives = 179/222 (80%)
Query: 6 ENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYE 65
EN ++ A + PA + H +A A+ G+VIAVPTDT+YGFACDACS+ AVNRIYE
Sbjct: 52 ENTAHRIDATAENIFPAVKDHVLKATDAINRGEVIAVPTDTIYGFACDACSAGAVNRIYE 111
Query: 66 IKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP 125
IKGR T PLAICVGDVSDI+RFA+ DHLPHGLLDSLLPGPVT+VL RGE+S LE+SLNP
Sbjct: 112 IKGRIQTRPLAICVGDVSDISRFALVDHLPHGLLDSLLPGPVTIVLKRGENSILERSLNP 171
Query: 126 GLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGV 185
GL+SIGVRVPD +F+R IARG SALALTSANL+GQPSSV VKDFE LW C+ V+DGGV
Sbjct: 172 GLDSIGVRVPDLDFIRSIARGTGSALALTSANLSGQPSSVCVKDFEGLWPHCSYVFDGGV 231
Query: 186 LPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
LPSGRAGST+VDL G +KILR GS+++ET A+L K VE
Sbjct: 232 LPSGRAGSTIVDLITPGVYKILRDGSSRKETAAVLGKFGFVE 273
>gi|226500320|ref|NP_001148954.1| ischemia/reperfusion inducible protein [Zea mays]
gi|195623606|gb|ACG33633.1| ischemia/reperfusion inducible protein [Zea mays]
Length = 275
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/222 (68%), Positives = 178/222 (80%)
Query: 6 ENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYE 65
EN ++ A + PA + H +A A+ G+VIAVPTDT+YGFACDACS+ AVNRIYE
Sbjct: 52 ENTAHRIDATAENIFPAMKDHVLKATDAINRGEVIAVPTDTIYGFACDACSAGAVNRIYE 111
Query: 66 IKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP 125
IKGR T PLAICVGDVSDI+RFA+ DHLPHGLLDSLLPGPVT+VL RGE+S LE+SLNP
Sbjct: 112 IKGRIQTRPLAICVGDVSDISRFALVDHLPHGLLDSLLPGPVTIVLKRGENSILERSLNP 171
Query: 126 GLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGV 185
GL+SIGVRVPD +F+R I RG SALALTSANL+GQPSSV VKDFE LW C+ V+DGGV
Sbjct: 172 GLDSIGVRVPDLDFIRSIVRGTGSALALTSANLSGQPSSVCVKDFEGLWPHCSYVFDGGV 231
Query: 186 LPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
LPSGRAGST+VDL G +KILR GS+++ET A+L K VE
Sbjct: 232 LPSGRAGSTIVDLITPGVYKILRDGSSRKETAAVLGKFGFVE 273
>gi|357120440|ref|XP_003561935.1| PREDICTED: LOW QUALITY PROTEIN: yrdC domain-containing protein,
mitochondrial-like [Brachypodium distachyon]
Length = 273
Score = 306 bits (783), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 151/222 (68%), Positives = 180/222 (81%)
Query: 6 ENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYE 65
EN +E +A + PATE H +AI A+ G+VIAVPTDT+YGFACDACS+EAVNRIYE
Sbjct: 51 ENRAHRIELRAEHILPATEDHVVKAIDAINRGQVIAVPTDTIYGFACDACSAEAVNRIYE 110
Query: 66 IKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP 125
IKGR PLAICV DV DI+RFAV DHLPHGLL SLLPGPVTVVL RGE+S LE+SLNP
Sbjct: 111 IKGRIXARPLAICVSDVPDISRFAVVDHLPHGLLHSLLPGPVTVVLKRGENSILERSLNP 170
Query: 126 GLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGV 185
GL+SIGVRVP+ +F+R IARG SALALTSANL+G+PSSV+VKDF +LW C+ V+DGG+
Sbjct: 171 GLDSIGVRVPNLDFIRSIARGAGSALALTSANLSGRPSSVNVKDFGDLWPNCSYVFDGGI 230
Query: 186 LPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
LPSGRAGST+VDL G +KILR GS+++ET A+L + VE
Sbjct: 231 LPSGRAGSTIVDLITPGVYKILRDGSSRDETTAVLGQFGFVE 272
>gi|326487440|dbj|BAJ89704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/222 (67%), Positives = 177/222 (79%)
Query: 6 ENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYE 65
EN +E + PA++ H +AI A+ G+VIAVPTDT+YGFACDACS+EAVNRIYE
Sbjct: 51 ENISHKIEASMDHILPASQDHVVKAIDAINGGQVIAVPTDTIYGFACDACSAEAVNRIYE 110
Query: 66 IKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP 125
IKGR HT PLAICV DV +I+RFA+ DHLPHGLL +LLPGPVTVVL RGE+S LE+SLNP
Sbjct: 111 IKGRIHTRPLAICVADVPEISRFAMVDHLPHGLLHNLLPGPVTVVLKRGENSILERSLNP 170
Query: 126 GLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGV 185
GL+SIGVRVP +F+R IARG SALALTSANL+G+PSSV VKDF +LW C+ V+DGG+
Sbjct: 171 GLDSIGVRVPKLDFIRSIARGAGSALALTSANLSGRPSSVGVKDFGDLWPHCSYVFDGGM 230
Query: 186 LPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
LPSGRAGST+VDL G +KILR GS++EET AIL VE
Sbjct: 231 LPSGRAGSTIVDLITPGVYKILRDGSSREETTAILGNFGFVE 272
>gi|326521554|dbj|BAK00353.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/209 (69%), Positives = 173/209 (82%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ PA++ H +AI A+ G+VIAVPTDT+YGFACDACS+EAVNRIYEIKGR HT PLAIC
Sbjct: 4 ILPASQDHVVKAIDAINGGQVIAVPTDTIYGFACDACSAEAVNRIYEIKGRIHTRPLAIC 63
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V DV +I+RFA+ DHLPHGLL +LLPGPVTVVL RGE+S LE+SLNPGL+SIGVRVP +
Sbjct: 64 VADVPEISRFAMVDHLPHGLLHNLLPGPVTVVLKRGENSILERSLNPGLDSIGVRVPKLD 123
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDL 198
F+R IARG SALALTSANL+G+PSSV VKDF +LW C+ V+DGG+LPSGRAGST+VDL
Sbjct: 124 FIRSIARGAGSALALTSANLSGRPSSVGVKDFGDLWPHCSYVFDGGMLPSGRAGSTIVDL 183
Query: 199 TRLGKFKILRPGSAKEETIAILEKHSLVE 227
G +KILR GS++EET AIL VE
Sbjct: 184 ITPGVYKILRDGSSREETTAILGNFGFVE 212
>gi|449534023|ref|XP_004173969.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like,
partial [Cucumis sativus]
Length = 175
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/175 (77%), Positives = 155/175 (88%), Gaps = 2/175 (1%)
Query: 56 SSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGE 115
S+EAV+RIYEIKGRK TSPLAICVGDVSDI RFAVTDHLP GLLDSLLPGPVTVVL RGE
Sbjct: 1 SAEAVHRIYEIKGRKLTSPLAICVGDVSDITRFAVTDHLPSGLLDSLLPGPVTVVLKRGE 60
Query: 116 SSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWE 175
SS L+KSLNPGL+SIGVRVPD++F+R+I+R E+ALALTSANL+GQPSSV V DFENLW+
Sbjct: 61 SSVLDKSLNPGLDSIGVRVPDADFIRLISRRSETALALTSANLSGQPSSVCVNDFENLWQ 120
Query: 176 RCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVEEPA 230
CA VYDGGVLP+GRAGST++DLT G FKI+R G KE+TIA LE++SL+E A
Sbjct: 121 HCAYVYDGGVLPAGRAGSTIIDLTEQGTFKIIRAG--KEQTIATLERYSLLEAAA 173
>gi|297822817|ref|XP_002879291.1| hypothetical protein ARALYDRAFT_482017 [Arabidopsis lyrata subsp.
lyrata]
gi|297325130|gb|EFH55550.1| hypothetical protein ARALYDRAFT_482017 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/182 (69%), Positives = 146/182 (80%)
Query: 1 MAFSLENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAV 60
M +SLE + V + + LV PATEA+A+EAI+A+K+ KVIAVPTDTLYGFACDACS EAV
Sbjct: 50 MVWSLERAETCVVSNSCLVHPATEAYAQEAIEAIKSDKVIAVPTDTLYGFACDACSLEAV 109
Query: 61 NRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLE 120
NRIYEIKGRK TSPLAICVGDV DI R A T+HLPHGLLDSLLPGPVT+VL RGESS LE
Sbjct: 110 NRIYEIKGRKLTSPLAICVGDVFDIKRVATTNHLPHGLLDSLLPGPVTLVLHRGESSILE 169
Query: 121 KSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACV 180
KSLNPG+ +IG+RVPD F+R + RG S LALTSANL+G SSV V DFE LW+ +
Sbjct: 170 KSLNPGIGTIGIRVPDCEFIREVLRGSGSVLALTSANLSGDRSSVCVNDFEKLWQDLQLL 229
Query: 181 YD 182
D
Sbjct: 230 MD 231
>gi|115451395|ref|NP_001049298.1| Os03g0201600 [Oryza sativa Japonica Group]
gi|113547769|dbj|BAF11212.1| Os03g0201600, partial [Oryza sativa Japonica Group]
Length = 183
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 145/172 (84%)
Query: 56 SSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGE 115
S+EAVNRIYEIKGR T PLAICV DV DI+RFAV DHLPHGLLDSLLPGPVTVVL RG
Sbjct: 10 SAEAVNRIYEIKGRVQTRPLAICVADVPDISRFAVVDHLPHGLLDSLLPGPVTVVLKRGN 69
Query: 116 SSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWE 175
+S LE+SLNPGLESIGVRVPD +F+R I+RG SALALTSANL+G PSSV+VKDFE+LW
Sbjct: 70 NSILERSLNPGLESIGVRVPDFDFIRAISRGAGSALALTSANLSGHPSSVNVKDFEDLWP 129
Query: 176 RCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
C+ V+DGG+LPSGRAGST+VDL G +KILR GS+++ET A+L K VE
Sbjct: 130 HCSYVFDGGILPSGRAGSTIVDLITPGVYKILRDGSSRQETTAVLGKFGFVE 181
>gi|302818656|ref|XP_002991001.1| hypothetical protein SELMODRAFT_132635 [Selaginella moellendorffii]
gi|300141332|gb|EFJ08045.1| hypothetical protein SELMODRAFT_132635 [Selaginella moellendorffii]
Length = 201
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 146/192 (76%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
V AT+ + AI AL+ G VI+VPTDTLYG A DACS AV RIY+IKGR SPLA+C
Sbjct: 9 VLAATQENVRHAIAALRRGDVISVPTDTLYGLAADACSRVAVERIYDIKGRNAGSPLAVC 68
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V DV D+ R+A DHLP LL LLPGPVT+VL+RG+ S LEKSLNPGL SIG+R+PDS+
Sbjct: 69 VADVPDLKRYARIDHLPDALLHDLLPGPVTLVLNRGDKSELEKSLNPGLLSIGIRIPDSD 128
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDL 198
F+R +AR + ALALTSAN + +PSS+ V++FE+LW +CA V+D G L +GRAGST+VDL
Sbjct: 129 FIRSVARAFDGALALTSANTSSRPSSICVEEFEHLWPQCAAVFDAGELSAGRAGSTIVDL 188
Query: 199 TRLGKFKILRPG 210
T FK+LR G
Sbjct: 189 TAEASFKVLRAG 200
>gi|302802275|ref|XP_002982893.1| hypothetical protein SELMODRAFT_234090 [Selaginella moellendorffii]
gi|300149483|gb|EFJ16138.1| hypothetical protein SELMODRAFT_234090 [Selaginella moellendorffii]
Length = 201
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 145/189 (76%)
Query: 22 ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
AT+ + AI AL+ G VI+VPTDTLYG A DACS A+ RIYEIKGR SPLA+CV D
Sbjct: 12 ATQENVRHAIAALRHGDVISVPTDTLYGLAADACSRVALERIYEIKGRNAGSPLAVCVAD 71
Query: 82 VSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
V D+ R+A DHLP LL LLPGPVT+VL+RG+ S LEKSLNPGL SIG+R+PDS+F+R
Sbjct: 72 VPDLKRYARIDHLPDALLHDLLPGPVTLVLNRGDKSELEKSLNPGLLSIGIRIPDSDFIR 131
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+AR + ALALTSAN + +PSS+ V++FE+LW +CA V+D G L +GRAGST+VDLT
Sbjct: 132 SVARAFDGALALTSANTSSKPSSICVEEFEHLWPQCAAVFDAGELSAGRAGSTIVDLTAE 191
Query: 202 GKFKILRPG 210
FK+LR G
Sbjct: 192 ASFKVLRAG 200
>gi|384251694|gb|EIE25171.1| hypothetical protein COCSUDRAFT_65132 [Coccomyxa subellipsoidea
C-169]
Length = 963
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/235 (47%), Positives = 153/235 (65%), Gaps = 8/235 (3%)
Query: 2 AFSLENGQVSVENKA-------GLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDA 54
AF+ +G ++ + A G V PA E+ A A +AL+ G V+AVPTDTLYG A A
Sbjct: 729 AFAWADGMLARGDGAEAAARPRGCVMPADESGAAVAAEALRRGDVVAVPTDTLYGLAACA 788
Query: 55 CSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRG 114
S + V R+Y IK R+ PLAICV DV+ + ++ + HLP GLLD LLPGPVTV+L+R
Sbjct: 789 NSEQGVGRLYAIKHRQAHVPLAICVADVAVVEQYGMCAHLPQGLLDDLLPGPVTVLLARR 848
Query: 115 ESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLW 174
+ L +LNPG+++IG+RVPDS F+ R A+ALTSAN++G S S+ DFE LW
Sbjct: 849 PDAALSAALNPGVQTIGIRVPDSAFMLEACRQHGRAVALTSANISGAISPTSIHDFEQLW 908
Query: 175 ERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAIL-EKHSLVEE 228
+CA V+D G++ + RAGSTVVDL+ G F+ILR GS +L EK+ + E+
Sbjct: 909 PQCAAVFDAGIVGADRAGSTVVDLSLEGSFRILREGSHPSHVRQVLTEKYGIAEQ 963
>gi|255071095|ref|XP_002507629.1| predicted protein [Micromonas sp. RCC299]
gi|226522904|gb|ACO68887.1| predicted protein [Micromonas sp. RCC299]
Length = 289
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 137/209 (65%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
PAT +A+ AL+ ++IAVPTDTLYG A A S +++ R+Y K R T P+AICV
Sbjct: 80 PATSQRVTDAVDALRRERIIAVPTDTLYGLAAGAHSDKSIRRLYAAKRRSETVPIAICVS 139
Query: 81 DVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
D D+ R+A T HL GLLD LLPGPVTV+LS+ S++L SLNP +G+R+P S+F+
Sbjct: 140 DAKDVERYADTKHLAEGLLDELLPGPVTVLLSQKSSADLPSSLNPNSRLMGIRIPKSDFI 199
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
R +AR ALALTSAN +G S++ + +F LW+ CA V+DGG + SGR GS++VDL+
Sbjct: 200 RAVARQYGHALALTSANQSGSASTLDLNEFTELWDDCAFVFDGGRIVSGRVGSSIVDLSL 259
Query: 201 LGKFKILRPGSAKEETIAILEKHSLVEEP 229
G F + R G E+T L K L + P
Sbjct: 260 PGTFSVQRRGDKYEDTRKTLMKFGLRQLP 288
>gi|189233999|ref|XP_001811736.1| PREDICTED: similar to CG33786 CG33786-PA, partial [Tribolium
castaneum]
Length = 210
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 147/206 (71%), Gaps = 7/206 (3%)
Query: 21 PATEAHAEE-AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICV 79
P + HAE A+ LK+G+VIA+PTDT+YG ACDA + ++N++Y IKGR P+AIC+
Sbjct: 6 PIRDPHAEALAVDLLKSGRVIALPTDTVYGLACDATNITSINKLYSIKGRNEAKPVAICL 65
Query: 80 GDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
GDV + +A HLP GLL+SLLPGPVTV+L+ +S L+KSL+ + +G+R+PD +F
Sbjct: 66 GDVPQVKAWAKIGHLPQGLLESLLPGPVTVILT--SASTLDKSLSFNAK-VGIRIPDYHF 122
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL---PSGRAGSTVV 196
+R +ARGL LALTSANL+ +PSS+++ +F++LW + V+DGG L S R STV+
Sbjct: 123 IRALARGLGRPLALTSANLSNEPSSLTINEFQDLWAQVGAVFDGGNLGLDDSRRRASTVI 182
Query: 197 DLTRLGKFKILRPGSAKEETIAILEK 222
DL+ G F I+R G A ++T+AIL K
Sbjct: 183 DLSECGLFTIVRHGIAVDKTVAILHK 208
>gi|270015172|gb|EFA11620.1| hypothetical protein TcasGA2_TC030645 [Tribolium castaneum]
Length = 203
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 145/202 (71%), Gaps = 6/202 (2%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ LK+G+VIA+PTDT+YG ACDA + ++N++Y IKGR P+AIC+GDV + +A
Sbjct: 3 AVDLLKSGRVIALPTDTVYGLACDATNITSINKLYSIKGRNEAKPVAICLGDVPQVKAWA 62
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
HLP GLL+SLLPGPVTV+L+ +S L+KSL+ + +G+R+PD +F+R +ARGL
Sbjct: 63 KIGHLPQGLLESLLPGPVTVILT--SASTLDKSLSFNAK-VGIRIPDYHFIRALARGLGR 119
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL---PSGRAGSTVVDLTRLGKFKI 206
LALTSANL+ +PSS+++ +F++LW + V+DGG L S R STV+DL+ G F I
Sbjct: 120 PLALTSANLSNEPSSLTINEFQDLWAQVGAVFDGGNLGLDDSRRRASTVIDLSECGLFTI 179
Query: 207 LRPGSAKEETIAILEKHSLVEE 228
+R G A ++T+AIL K L+ +
Sbjct: 180 VRHGIAVDKTVAILHKFGLINK 201
>gi|307107023|gb|EFN55267.1| hypothetical protein CHLNCDRAFT_35508 [Chlorella variabilis]
Length = 284
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 137/208 (65%)
Query: 14 NKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTS 73
+AG V PA + A +AL +VIAVPTDTLYG A A SS+ V IY K R
Sbjct: 67 REAGHVLPAALCNVGLAAEALGRAEVIAVPTDTLYGLAACARSSQGVAHIYATKRRGDHK 126
Query: 74 PLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVR 133
PLAI V D++D+ RFA HLP GLL+ LLPGPVT++L R + L NPG+ +IG+R
Sbjct: 127 PLAIAVADIADVPRFADVQHLPEGLLEDLLPGPVTLLLQRRPDAPLAAQFNPGVGAIGIR 186
Query: 134 VPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGS 193
+PDS F+R + R +ALALTSAN++G SSV V +F+ LW C+ V+DGG L +GR+GS
Sbjct: 187 IPDSAFIRAVCRQHRAALALTSANISGSMSSVDVGEFQELWPSCSLVFDGGQLDAGRSGS 246
Query: 194 TVVDLTRLGKFKILRPGSAKEETIAILE 221
TV+DLT+ G+F + R G+ + +L+
Sbjct: 247 TVIDLTQPGQFSVARRGAGFARIMQLLQ 274
>gi|334329214|ref|XP_001380961.2| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Monodelphis domestica]
Length = 281
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 143/210 (68%), Gaps = 11/210 (5%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ AL+ G ++AVPTDTLYG AC AC S A+ +Y +KGR T PLA+C+G V+DI ++
Sbjct: 75 AVTALRAGGLVAVPTDTLYGVACSACCSAALGAVYSLKGRSQTKPLAVCLGGVADIYKYC 134
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P LL+ LLPGPVT+V+ R S L K LNP +G+R+PD F+R +A+
Sbjct: 135 QV-RVPRELLEDLLPGPVTLVMER--SRELNKDLNPFTPLVGIRIPDHAFMRDLAQAFSG 191
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSAN++ QPSS++VK+F++LW + + V DGG + P R GSTVVDL+ GK+
Sbjct: 192 PLALTSANISSQPSSLNVKEFQDLWPQLSLVIDGGPIGDVKSPECRLGSTVVDLSVPGKY 251
Query: 205 KILRPGSAKEETIAILE-KHSLV--EEPAA 231
+I+RPG A +T AIL+ K+ LV EEP +
Sbjct: 252 RIIRPGCALTQTAAILQKKYRLVPSEEPCS 281
>gi|157118653|ref|XP_001659198.1| hypothetical protein AaeL_AAEL001412 [Aedes aegypti]
gi|108883260|gb|EAT47485.1| AAEL001412-PA [Aedes aegypti]
Length = 251
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 145/215 (67%), Gaps = 7/215 (3%)
Query: 16 AGLVRPATEAHA-EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSP 74
AG V +++ A +A L++GKVIA+PTDT+YG AC A +A+ R+Y IKGR+ P
Sbjct: 35 AGTVIKSSDNKAIRQAANLLESGKVIALPTDTVYGLACSANDPKAIQRLYAIKGREEKKP 94
Query: 75 LAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKS-LNPGLESIGVR 133
+AICV D +D+ + +HLP+ LL+ LLPGPVT+V+ + S +L+ LNPG+E IG+R
Sbjct: 95 VAICVADFNDLRHWGQANHLPNELLEQLLPGPVTIVVRK--SVHLDNPFLNPGVEKIGIR 152
Query: 134 VPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL---PSGR 190
+PD +F+R ++R +ALTSAN + + S+++V +FE LW V+DGG L R
Sbjct: 153 IPDFDFIRDVSRAFRFPVALTSANRSSEQSTLNVGEFEKLWPALGAVFDGGQLGLREEQR 212
Query: 191 AGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSL 225
A STV+DL+++G++KI+R G A E T+ ++E+
Sbjct: 213 AASTVIDLSQVGQYKIIRKGVAIEHTVRVVEQFGF 247
>gi|308799281|ref|XP_003074421.1| yrdC protein-related (ISS) [Ostreococcus tauri]
gi|116000592|emb|CAL50272.1| yrdC protein-related (ISS), partial [Ostreococcus tauri]
Length = 239
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 130/193 (67%), Gaps = 3/193 (1%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ AL+ G VIAVPTDT+YGFA A AV R+YEIKGRK T +AI VGDV DI R+
Sbjct: 36 AVGALRRGGVIAVPTDTIYGFAARAEDGAAVRRLYEIKGRKATVAVAIAVGDVGDIGRYG 95
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSR--GESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
HL GLL +LPGPVTV+L R E LNPG++ IG+RVP S+FVR + R
Sbjct: 96 ECSHLREGLLGRILPGPVTVLLRRRASEEGGASSELNPGVDLIGIRVPASDFVREVCRAH 155
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRL-GKFKI 206
SA+ALTSAN +G+ S+ SV++F LW+ CA V+DGGV+ + R GST+VDL+ G++ +
Sbjct: 156 GSAIALTSANRSGETSTTSVEEFAELWDACAEVFDGGVIETKRLGSTIVDLSSTDGRYGV 215
Query: 207 LRPGSAKEETIAI 219
+R G E + +
Sbjct: 216 VREGEKCAELLEV 228
>gi|139949035|ref|NP_001077336.1| yrdC domain-containing protein, mitochondrial [Danio rerio]
gi|134025291|gb|AAI34956.1| Zgc:162301 protein [Danio rerio]
Length = 235
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 141/204 (69%), Gaps = 11/204 (5%)
Query: 31 IQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF-- 88
+ ALK G+V+AVPTDT+YG AC A +SEA+ R+Y+IKGR PLAICVG++ DI ++
Sbjct: 35 VNALKAGQVVAVPTDTIYGLACVAQNSEAIRRVYDIKGRNGDKPLAICVGEIHDIYKYCK 94
Query: 89 -AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+V D LL LLPGPVT+VL R S+ L LNP + IGVR+PD F+R + +
Sbjct: 95 VSVKDR----LLRDLLPGPVTLVLER--SATLNGDLNPFTKLIGVRIPDHPFMRRLCQMC 148
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGG-VLPSGRAGSTVVDLTRLGKFKI 206
++ LALTSAN++ Q S+V+ +FE+LW R A V DGG + R GSTVVDL+ G+++I
Sbjct: 149 DTPLALTSANVSTQSSTVAANEFEDLWPRLAVVVDGGPIEDKSRLGSTVVDLSVCGRYRI 208
Query: 207 LRPGSAKEETIAILE-KHSLVEEP 229
+RPG A T+ ILE ++ L+E+P
Sbjct: 209 IRPGCALSATVQILEGRYGLLEDP 232
>gi|348552974|ref|XP_003462302.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Cavia porcellus]
Length = 279
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 133/202 (65%), Gaps = 8/202 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KGR T PLA+C+G V+D+ R+
Sbjct: 74 AVAELRAGAVVAVPTDTLYGLACSASCSAALGAVYRLKGRSGTKPLAVCLGRVADVYRYC 133
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P LL LLPGPVT+V+ R E L K LNP +GVR+PD F++ +A+ E
Sbjct: 134 KV-KVPEELLKELLPGPVTLVMERSE--ELNKDLNPFTPLVGVRIPDHAFMQELAQMFEG 190
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSG-----RAGSTVVDLTRLGKF 204
LALTSAN++ Q SS+ V++F++LW + V DGG + G R GSTVVDL+ GKF
Sbjct: 191 PLALTSANISSQASSLKVEEFQDLWSHLSLVIDGGPIGDGQNFECRLGSTVVDLSVPGKF 250
Query: 205 KILRPGSAKEETIAILEKHSLV 226
I+RPG A E T AIL+K+ L+
Sbjct: 251 GIIRPGCALESTTAILQKYKLL 272
>gi|326933011|ref|XP_003212603.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Meleagris gallopavo]
Length = 243
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/237 (45%), Positives = 145/237 (61%), Gaps = 13/237 (5%)
Query: 2 AFSLENGQVSVENKAGLVRP----ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSS 57
A L + V++ L RP T A+ AL+ G ++AVPTDT+YG AC A S
Sbjct: 8 ALPLLQWRPEVQSGTSLWRPEVQRGTSFXVAAAVGALQQGGLVAVPTDTVYGVACLAQDS 67
Query: 58 EAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESS 117
AV IY +KGR T PLAIC+GDV +I R+ + +P LL LLPGPVT+VL R E
Sbjct: 68 RAVRSIYSLKGRNGTKPLAICLGDVENIYRYCHVN-VPDELLQDLLPGPVTLVLKRSE-- 124
Query: 118 NLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERC 177
L K LNP +GVR+P+ F+R +AR LALTSAN++ Q S+++V +F++LW +
Sbjct: 125 ELNKDLNPFTSLVGVRIPNHPFIRELARACPGPLALTSANVSSQASTLTVSEFQDLWPQL 184
Query: 178 ACVYDGGVL-----PSGRAGSTVVDLTRLGKFKILRPGSAKEETIAIL-EKHSLVEE 228
+ V DGG + P R GSTVVDL+ GKF I+RPG A T+ IL +K+ L+ E
Sbjct: 185 SLVVDGGPIGDVQSPECRLGSTVVDLSVSGKFTIIRPGCALTSTVEILRQKYGLIPE 241
>gi|147790869|emb|CAN77236.1| hypothetical protein VITISV_024209 [Vitis vinifera]
Length = 750
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/100 (88%), Positives = 93/100 (93%)
Query: 17 GLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLA 76
G+VRPAT+AHAEEAI+A+K GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLA
Sbjct: 610 GVVRPATDAHAEEAIEAIKAGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLA 669
Query: 77 ICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGES 116
ICVGDV DI RFAVTDHLP GLL SLLPGPVTVVL RG +
Sbjct: 670 ICVGDVLDIQRFAVTDHLPDGLLGSLLPGPVTVVLRRGRA 709
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 42/48 (87%)
Query: 185 VLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVEEPAAG 232
VL GRAGSTVVDL+RLGK+KILRPGSA EET+AILE+HSL+ E AA
Sbjct: 703 VLRRGRAGSTVVDLSRLGKYKILRPGSAMEETVAILERHSLMPEAAAA 750
>gi|426218611|ref|XP_004003536.1| PREDICTED: yrdC domain-containing protein, mitochondrial, partial
[Ovis aries]
Length = 249
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 133/202 (65%), Gaps = 8/202 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A SEA+ +Y IKGR T PLA+C+G V+D+ R+
Sbjct: 44 AVAELRAGAVVAVPTDTLYGLACSASCSEALGAVYRIKGRSETKPLAVCLGRVADVYRYC 103
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P LL LLPGPVT+V+ R E L K LNP +G+R+PD F++ +A+
Sbjct: 104 HV-RVPEELLKDLLPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHTFMQDLAQVFGG 160
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q S ++V++F++LW + + DGG + P R GSTVVDL+ GKF
Sbjct: 161 PLALTSANLSSQSSPLNVEEFQDLWPHLSLIIDGGPIGDGQSPECRLGSTVVDLSVPGKF 220
Query: 205 KILRPGSAKEETIAILEKHSLV 226
I+RPG A E T AIL+++ L+
Sbjct: 221 GIIRPGCALESTSAILQEYGLL 242
>gi|321463246|gb|EFX74263.1| hypothetical protein DAPPUDRAFT_215182 [Daphnia pulex]
Length = 226
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 142/210 (67%), Gaps = 10/210 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A++ LK+G VIA+PTDTLYG AC + S EA+ ++Y+IK R P+AICV VS+I +
Sbjct: 18 KNAVELLKSGSVIALPTDTLYGIACLSQSPEALKKLYQIKSRDKNKPVAICVSQVSEIAK 77
Query: 88 FA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ VT + LL LLPGPVT+V R + N E LNPG + +G+R+PDS F+R ++
Sbjct: 78 WGHVT--VDERLLHDLLPGPVTLVFERSPALNPE--LNPGTKLVGIRIPDSWFIRQLSNS 133
Query: 147 LESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSG---RAGSTVVDLTRLGK 203
LALTSAN++G S++SV++F +WE V++GG +P G R GSTVVDL+ G
Sbjct: 134 CAEPLALTSANISGSQSTLSVEEFLGIWEHLGAVFNGGPIPDGSTARLGSTVVDLSSPGT 193
Query: 204 FKILRPGSAKEETIAILEKHSLVE--EPAA 231
++I+RPG A+ T+ LEK+ LVE EPA+
Sbjct: 194 YRIIRPGCAQTITVEKLEKYGLVEASEPAS 223
>gi|50759736|ref|XP_417757.1| PREDICTED: yrdC domain-containing protein, mitochondrial [Gallus
gallus]
Length = 255
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 134/205 (65%), Gaps = 9/205 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ AL+ G ++AVPTDT+YG AC A S AV IY +KGR T PLAIC+GDV I R+
Sbjct: 52 AVGALQEGGLVAVPTDTVYGVACLAQDSRAVQSIYSLKGRNGTKPLAICLGDVEHIYRYC 111
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ +P LL LLPGPVT+VL R E L K LNP +GVR+P+ F+R +AR
Sbjct: 112 HVN-VPDELLQDLLPGPVTLVLKRSE--ELNKDLNPFTSLVGVRIPNHPFIRELARACPG 168
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSAN++ Q S+++V +F++LW + + V DGG + P R GSTVVDL+ GKF
Sbjct: 169 PLALTSANVSSQASTLTVSEFQDLWPQLSLVVDGGPIGDVQSPECRLGSTVVDLSVSGKF 228
Query: 205 KILRPGSAKEETIAIL-EKHSLVEE 228
I+RPG A T+ IL +K+ LV E
Sbjct: 229 TIIRPGCALTSTVEILRQKYGLVPE 253
>gi|344287230|ref|XP_003415357.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Loxodonta africana]
Length = 280
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 140/219 (63%), Gaps = 14/219 (6%)
Query: 16 AGLVRPATEAHA--EEAIQA----LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGR 69
+G VR A+ A EA++A L+ G V+AVPTDTLYG AC A S A+ +Y +KGR
Sbjct: 54 SGAVRAASPERACWTEALRAAVAELRAGAVVAVPTDTLYGLACSASCSAALGDVYRLKGR 113
Query: 70 KHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLES 129
PLA+C+G V+D+ R+ +P GLL LLPGPVT+V+ R E L K LNP
Sbjct: 114 SEAKPLAVCLGRVADVYRYCHV-RVPEGLLKDLLPGPVTLVMERSE--ELNKDLNPFTPL 170
Query: 130 IGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL--- 186
+G+R+PD F++ + + LALTSANL+ Q SS++VK+F++LW + + V DGG +
Sbjct: 171 VGIRIPDHAFMQDLVQVFGGPLALTSANLSSQASSLNVKEFQDLWPQLSLVIDGGPIGDG 230
Query: 187 --PSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKH 223
P R GSTVV+L+ GKF I+RPG A E T AIL++
Sbjct: 231 QSPEYRLGSTVVNLSVPGKFGIIRPGCALESTTAILQQK 269
>gi|170061182|ref|XP_001866124.1| ischemia/reperfusion inducible protein [Culex quinquefasciatus]
gi|167879525|gb|EDS42908.1| ischemia/reperfusion inducible protein [Culex quinquefasciatus]
Length = 242
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 140/236 (59%), Gaps = 13/236 (5%)
Query: 4 SLENGQVSVENKAGLVRPATEAHA---------EEAIQALKTGKVIAVPTDTLYGFACDA 54
L+N ++S + R + H +A L++GKVI +PTDT+YG AC A
Sbjct: 3 QLQNMKMSANPYEKITRSVYKKHVIDIKSPDAILQAANLLESGKVIGLPTDTVYGLACSA 62
Query: 55 CSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRG 114
A+ ++Y+IKGR T P+AICV +V D+ + DHLP GLL LLPG VT+V+ +
Sbjct: 63 NDPAAIKKLYDIKGRICTKPIAICVPEVKDVLYWGKADHLPMGLLQELLPGAVTIVVKKS 122
Query: 115 ESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLW 174
+ LNPG+E IG+RVP NF+R + + ++ +ALTSAN + Q S++ + +F+ LW
Sbjct: 123 HYLD-NPFLNPGVEKIGIRVPKFNFIRNVTKQFKAPMALTSANFSSQKSTLEITEFKALW 181
Query: 175 ERCACVYDGGVL---PSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
V+DGG L RA STV+DL+ KF+I+R G A + TI +L+++ E
Sbjct: 182 PELGAVFDGGQLGQSEEQRAASTVIDLSEPRKFEIIRTGVAIKRTIELLKRYRFEE 237
>gi|395830153|ref|XP_003788199.1| PREDICTED: yrdC domain-containing protein, mitochondrial [Otolemur
garnettii]
Length = 275
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 139/220 (63%), Gaps = 13/220 (5%)
Query: 8 GQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIK 67
GQ + +AG TEA A+ L+ G V+AVPTDTLYG AC A S A+ +Y +K
Sbjct: 56 GQAASSERAGW----TEA-LRAAVAELRAGAVLAVPTDTLYGLACSASCSAALRDVYRLK 110
Query: 68 GRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGL 127
GR PLA+C+G V+D+ R+ +P LL LLPGPVT+V+ R E+ N K LNP
Sbjct: 111 GRSEAKPLAVCLGRVADVYRYCHV-RVPEELLKDLLPGPVTLVMERTEALN--KDLNPFT 167
Query: 128 ESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL- 186
+G+R+PD F++ +++ LALTSANL+ Q SS++V++F++LW + V DGG +
Sbjct: 168 PLVGIRIPDHTFMQDLSQMFGEPLALTSANLSSQASSLNVEEFQHLWPHLSLVIDGGPIG 227
Query: 187 ----PSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEK 222
P R GSTVVDL+ GKF I+RPG A E T AIL++
Sbjct: 228 DSQSPECRLGSTVVDLSVPGKFGIIRPGCALERTTAILQQ 267
>gi|225708092|gb|ACO09892.1| Hypothetical protein ywlC [Osmerus mordax]
Length = 268
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 137/203 (67%), Gaps = 5/203 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ +Q+LK G+V+A+PTDT+YG AC A +S+A+ R+YEIKGR PLAICVG++ DI +
Sbjct: 65 DATVQSLKEGQVVALPTDTIYGLACLAQNSDAIKRVYEIKGRNGQKPLAICVGEIQDIYK 124
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ + LL LLPGPVT+VL R S+ L LNP +GVR+P+ F+R + +
Sbjct: 125 YCKVS-VKEELLKELLPGPVTLVLQR--STVLNTDLNPFTPLVGVRIPNHPFMRRLCQLC 181
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-PSGRAGSTVVDLTRLGKFKI 206
LALTSAN++ S+V+V +F++LW R A V DGG + R GSTV+DL+ GK++I
Sbjct: 182 AEPLALTSANISTHSSTVAVHEFQDLWPRLAVVVDGGPIGDHSRLGSTVIDLSVFGKYRI 241
Query: 207 LRPGSAKEETIAILE-KHSLVEE 228
+RPG A T+ +LE K+ L+E+
Sbjct: 242 IRPGCAFSATVDLLEHKYGLLED 264
>gi|431891070|gb|ELK01947.1| YrdC domain-containing protein, mitochondrial [Pteropus alecto]
Length = 280
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 130/198 (65%), Gaps = 8/198 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 74 AVAELRAGAVVAVPTDTLYGLACSANCSAALGAVYRLKGRSEAKPLAVCLGRVADVYRYC 133
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
LP GLL LLPGPVT+V+ R E L K LNP +G+R+PD F++ +A+
Sbjct: 134 HV-RLPEGLLKDLLPGPVTLVMERSE--ELNKDLNPLTPLVGIRIPDHAFMQDLAQMFGG 190
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ SS++V++F++LW + + V DGG + P R GSTVVDL+ GKF
Sbjct: 191 PLALTSANLSSHASSLNVEEFQDLWPQLSLVIDGGPIGDGQSPECRLGSTVVDLSVPGKF 250
Query: 205 KILRPGSAKEETIAILEK 222
I+RPG A E T A+L++
Sbjct: 251 GIIRPGCALESTTAVLQQ 268
>gi|340379066|ref|XP_003388048.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Amphimedon queenslandica]
Length = 249
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 139/202 (68%), Gaps = 6/202 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
E + L+ G V+AVPTDT+YG A + A+ RIY IKGR PLAICVG ++DI+++
Sbjct: 49 ECARLLERGGVLAVPTDTIYGLTASALDTGAIERIYSIKGRTKMRPLAICVGRINDIDKW 108
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A+ + L LLD LLPGPVT+V+ R ES L SLNP +E++GVR+P S+F+ +A+ +
Sbjct: 109 AI-NTLSTDLLDELLPGPVTLVMRRRES--LNPSLNPAIETVGVRIPHSHFITELAQHFD 165
Query: 149 SALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL---PSGRAGSTVVDLTRLGKFK 205
LALTSAN++ + S++++++F++LW + V DGG + + R GSTVVD++ G +K
Sbjct: 166 KPLALTSANVSNEKSTLAIEEFQSLWPQLDAVVDGGRIGNNSASRDGSTVVDVSVEGYYK 225
Query: 206 ILRPGSAKEETIAILEKHSLVE 227
I+RPG A +T A+L K+ L E
Sbjct: 226 IIRPGCALMQTSALLMKYGLKE 247
>gi|291408762|ref|XP_002720685.1| PREDICTED: ischemia/reperfusion inducible protein [Oryctolagus
cuniculus]
Length = 280
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/198 (48%), Positives = 129/198 (65%), Gaps = 8/198 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A SEA+ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 74 AVAELRAGAVVAVPTDTLYGLACSASCSEALGAVYRLKGRSEAKPLAVCLGRVADVYRYC 133
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P LL LLPGPVT+V+ R E L K LNP +GVR+P F++ +A+
Sbjct: 134 HV-RVPEQLLKDLLPGPVTLVMERSE--ELNKDLNPFTPLVGVRIPAHAFMQDLAQMFGG 190
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS++V++F++LW + V DGG + P R GSTVVDL+ GKF
Sbjct: 191 PLALTSANLSSQASSLNVQEFQDLWPHLSLVIDGGPIGEGQSPECRLGSTVVDLSVPGKF 250
Query: 205 KILRPGSAKEETIAILEK 222
I+RPG A E T AIL++
Sbjct: 251 GIIRPGCALESTTAILQQ 268
>gi|114050899|ref|NP_001040163.1| ischemia/reperfusion inducible protein [Bombyx mori]
gi|87248253|gb|ABD36179.1| ischemia/reperfusion inducible protein [Bombyx mori]
Length = 274
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 132/201 (65%), Gaps = 5/201 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A + L G+VIAVPTDT+YG AC A A+ ++Y IKGR+ P+AICV V+D+ ++
Sbjct: 57 RAAECLAKGQVIAVPTDTIYGLACSANCPLAIKKLYSIKGREAVKPVAICVTSVADLRKW 116
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
H+ LLDSLLPGPVTVVL + + + LNP IG+R+P +F+ + + +
Sbjct: 117 GEASHISDKLLDSLLPGPVTVVLQKTKHLD-NPFLNPSTTKIGIRIPKHDFMNTVTKIFD 175
Query: 149 SALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSG----RAGSTVVDLTRLGKF 204
+ALTSAN + +PS++S+K+FE+L+ A ++DGG+L G R GSTV+DL++ G +
Sbjct: 176 MPVALTSANFSNEPSTLSIKEFEHLYPHLAAIFDGGLLSQGLEQNRTGSTVIDLSKNGLY 235
Query: 205 KILRPGSAKEETIAILEKHSL 225
KI+R G + + I ++E++ L
Sbjct: 236 KIIRKGISYDNVIKVVERYGL 256
>gi|326431169|gb|EGD76739.1| yrdC domain-containing protein [Salpingoeca sp. ATCC 50818]
Length = 388
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 128/200 (64%), Gaps = 6/200 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A++ L+ G VI VPTDT+YG AC A S++ V RIY IKGR P+AICV DV+ I +
Sbjct: 103 DAVETLRAGGVIGVPTDTIYGLACLAQSTQGVRRIYSIKGRSELKPIAICVHDVAAIGAY 162
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A +P LL +LLPGPVTVVL R + N E LNP IGVRVPD FVR + + L
Sbjct: 163 AELS-VPERLLRALLPGPVTVVLPRKPALNPE--LNPHTSLIGVRVPDFPFVRKLVQALG 219
Query: 149 SALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPS---GRAGSTVVDLTRLGKFK 205
LALTSAN +G+ S +S +F +LW VYD G + + R GSTVVDL+R ++
Sbjct: 220 EPLALTSANRSGEQSCISSSEFSHLWGELNAVYDAGTIETSGASRLGSTVVDLSRGKAYQ 279
Query: 206 ILRPGSAKEETIAILEKHSL 225
++R GSA+E T+A L H L
Sbjct: 280 VIRGGSAEEATLATLHAHGL 299
>gi|156548558|ref|XP_001605728.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Nasonia vitripennis]
Length = 266
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 130/204 (63%), Gaps = 7/204 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + L+ GK++A+PTDT+YG A A + +V R+YEIK R + PLAIC+ DV DI +A
Sbjct: 35 AAELLRNGKIVAMPTDTIYGLAGLAQNDASVARLYEIKKRDESKPLAICLWDVDDIENWA 94
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ LP GLL +LLPGP T+VL R S+L LNPG+E++G+R+P +F+R + + L
Sbjct: 95 HVEDLPDGLLQALLPGPTTLVLKR--KSSLNPHLNPGVENVGIRIPKYDFIRSVVKMLNQ 152
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYD-----GGVLPSGRAGSTVVDLTRLGKF 204
+ALTSAN + PSS+ ++F++LW V+ G + S R GSTVVDLT G+F
Sbjct: 153 PIALTSANESNAPSSLHPEEFQSLWPELDGVFYEKMNLGTIKESWRRGSTVVDLTVAGQF 212
Query: 205 KILRPGSAKEETIAILEKHSLVEE 228
ILR G + T +L +H L +
Sbjct: 213 SILRRGIGYQTTFRVLREHQLTYQ 236
>gi|145340914|ref|XP_001415562.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575785|gb|ABO93854.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 195
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 126/195 (64%), Gaps = 3/195 (1%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A AL+ G VIAVPTDT+YGFA A + +AV R+YEIKGR+ PLAI VGDV D+ +
Sbjct: 1 AAAALRRGGVIAVPTDTIYGFAASAANGDAVRRLYEIKGRRAGVPLAIAVGDVRDVGTYG 60
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKS--LNPGLESIGVRVPDSNFVRVIARGL 147
HL G L LLPGP TV+L R + LNPG++ IG+RVP +FVR + R
Sbjct: 61 DDGHLREGALARLLPGPTTVLLRRRRGDAGRATPELNPGVDLIGIRVPAHDFVREVCRAH 120
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDL-TRLGKFKI 206
A+ALTSAN +G+ S+ + ++F LW+ C V+DGG +P+ R GST+VDL +R F I
Sbjct: 121 GGAIALTSANRSGETSATAAEEFAELWDACDEVFDGGAIPAKRLGSTIVDLSSRANDFAI 180
Query: 207 LRPGSAKEETIAILE 221
+R G +E + +LE
Sbjct: 181 VRAGERCDELVRVLE 195
>gi|390356603|ref|XP_793502.2| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 246
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 135/203 (66%), Gaps = 7/203 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A +L +G VI+VPTDT+YG A A S+EAV ++YE+KGR P+AIC+ + DI+R+
Sbjct: 45 AANSLMSGNVISVPTDTIYGLAALAQSAEAVEKLYEVKGRNGNKPIAICINCIEDIHRWG 104
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ +L LLPGPVTV+ R S L NP E IG+R+P+ F++ +A +
Sbjct: 105 YVT-VSDDILRDLLPGPVTVLFRR--RSELNPEFNPSSELIGLRIPEYPFIQQLAAAVGE 161
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPS---GRAGSTVVDLTRLGKFKI 206
+ALTSAN + Q S++SVK+FE+LW + V+DGGVL R GSTVVDL+ +G+F I
Sbjct: 162 PIALTSANPSAQRSTLSVKEFEDLWSKIDLVFDGGVLSDSEESRQGSTVVDLSVMGRFSI 221
Query: 207 LRPGSAKEETIAILE-KHSLVEE 228
+RPGSA+E+T+ IL K+ L E+
Sbjct: 222 IRPGSAQEKTVKILNGKYHLKEK 244
>gi|312375719|gb|EFR23031.1| hypothetical protein AND_13789 [Anopheles darlingi]
Length = 247
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 140/224 (62%), Gaps = 7/224 (3%)
Query: 6 ENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYE 65
E+G+ S ++K L+ + +A L++G+VIA+PTDT+YG AC A + A+ ++Y
Sbjct: 15 EDGRRS-DSKRALIAITDGSAIRQAANLLESGQVIALPTDTVYGLACSANNPAAIQKLYA 73
Query: 66 IKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKS-LN 124
IKGR P+AICV D D+ + DHLP LL LLPG VT+V+ + S +L+ LN
Sbjct: 74 IKGRHEQKPVAICVADFDDLRYWGQADHLPDALLRQLLPGAVTIVVRK--SLHLDNPFLN 131
Query: 125 PGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGG 184
PG+E IG+R+PD F+R ++R +ALTSAN + S+++V +F+ LW V+DGG
Sbjct: 132 PGIEKIGIRIPDFKFIRDVSRAFRYPIALTSANKSACQSTLNVHEFQCLWSSLGAVFDGG 191
Query: 185 VLPSG---RAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSL 225
L RA STV+DL+ G ++++R G A E T A++E+ +
Sbjct: 192 QLGQSDEQRAASTVIDLSEDGSYQLIRAGVAAEHTKAVVERFNF 235
>gi|168009850|ref|XP_001757618.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691312|gb|EDQ77675.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/153 (55%), Positives = 113/153 (73%)
Query: 22 ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
A E H +EA++AL +VIAVPTDTLYG ACDA S+EA+ R+YEIK RK +SPLA+CV D
Sbjct: 2 AREEHYKEAVRALGNEQVIAVPTDTLYGLACDASSAEAIRRVYEIKERKLSSPLAVCVSD 61
Query: 82 VSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
V + + T LP GLL++LLPG VT++L R E L SLNPG+ SIG+R+PDS+F+R
Sbjct: 62 VDVVAAYGETAQLPAGLLNALLPGAVTLLLPRREPGFLSASLNPGIGSIGIRIPDSDFIR 121
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDFENLW 174
+AR A+ALTSAN + S+V +++FE+LW
Sbjct: 122 GVARSFGGAVALTSANTSSHASTVRIEEFEHLW 154
>gi|18424373|ref|NP_568924.1| DHBP synthase RibB-like alpha/beta domain-containing protein
[Arabidopsis thaliana]
gi|14190379|gb|AAK55670.1|AF378867_1 AT5g60590/muf9_240 [Arabidopsis thaliana]
gi|15215871|gb|AAK91479.1| AT5g60590/muf9_240 [Arabidopsis thaliana]
gi|332009968|gb|AED97351.1| DHBP synthase RibB-like alpha/beta domain-containing protein
[Arabidopsis thaliana]
Length = 164
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/113 (75%), Positives = 96/113 (84%)
Query: 1 MAFSLENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAV 60
M +SLE + V +K+ LV PATEA+A+EAI+A+K+ KVIAVPTDTLYGFACDACS EAV
Sbjct: 50 MVWSLERAETCVVSKSCLVHPATEAYAQEAIEAIKSEKVIAVPTDTLYGFACDACSLEAV 109
Query: 61 NRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSR 113
+RIYEIKGRK TSPLAICVGDV DI R A T HLPHGLLDSLLPGPVT+VL R
Sbjct: 110 SRIYEIKGRKLTSPLAICVGDVLDIKRVATTSHLPHGLLDSLLPGPVTLVLQR 162
>gi|149023911|gb|EDL80408.1| ischemia/reperfusion inducible protein [Rattus norvegicus]
Length = 263
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 131/203 (64%), Gaps = 9/203 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A++ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 57 AVAELRAGAVVAVPTDTLYGLACSASCSAALSCVYRLKGRSEAKPLAVCLGRVADVYRYC 116
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P LL+ L PGPVT+V+ R E L K LNP +G+R+PD F+ +A+
Sbjct: 117 QV-RVPRELLEDLFPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHAFMLDLAQMFGG 173
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS+SV++F++LW + V DGG + P R GSTVVDL+ GKF
Sbjct: 174 PLALTSANLSSQASSLSVEEFQDLWPHLSLVIDGGPIGDSESPECRLGSTVVDLSVPGKF 233
Query: 205 KILRPGSAKEETIAILE-KHSLV 226
I+R G A E T AIL+ K+ L+
Sbjct: 234 GIIRSGCALENTTAILQGKYGLL 256
>gi|76781474|ref|NP_783194.2| yrdC domain-containing protein, mitochondrial precursor [Rattus
norvegicus]
gi|123781639|sp|Q499R4.1|YRDC_RAT RecName: Full=YrdC domain-containing protein, mitochondrial;
AltName: Full=Ischemia/reperfusion-inducible protein
homolog; Flags: Precursor
gi|71681008|gb|AAH99797.1| YrdC domain containing (E.coli) [Rattus norvegicus]
Length = 280
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 131/203 (64%), Gaps = 9/203 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A++ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 74 AVAELRAGAVVAVPTDTLYGLACSASCSAALSCVYRLKGRSEAKPLAVCLGRVADVYRYC 133
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P LL+ L PGPVT+V+ R E L K LNP +G+R+PD F+ +A+
Sbjct: 134 QV-RVPRELLEDLFPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHAFMLDLAQMFGG 190
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS+SV++F++LW + V DGG + P R GSTVVDL+ GKF
Sbjct: 191 PLALTSANLSSQASSLSVEEFQDLWPHLSLVIDGGPIGDSESPECRLGSTVVDLSVPGKF 250
Query: 205 KILRPGSAKEETIAILE-KHSLV 226
I+R G A E T AIL+ K+ L+
Sbjct: 251 GIIRSGCALENTTAILQGKYGLL 273
>gi|412993969|emb|CCO14480.1| predicted protein [Bathycoccus prasinos]
Length = 293
Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 134/212 (63%), Gaps = 12/212 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A+QALK G VIAVPTDTLYGFACDA ++EA+ +Y +KGR+ T P+A+CV ++ +
Sbjct: 80 EFAVQALKRGSVIAVPTDTLYGFACDASNAEAIENLYAVKGREKTKPVAVCVSRAEEVKK 139
Query: 88 FAVTD-HLPHGLLDSLLPGPVTVVLSRGES-SNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
D + LL LLPG VT++ R + + L KSLNP ++++GVRVPD F+ +
Sbjct: 140 ICELDGKIEESLLRKLLPGAVTLLFKRKWTETTLSKSLNPNVDNVGVRVPDCAFILDVCD 199
Query: 146 GLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSG---------RAGSTVV 196
+ A+ALTSAN +G+PS V V +F L E+C V+DGG + RAGST+V
Sbjct: 200 AFDGAIALTSANTSGKPSCVDVNEFRELHEKCERVFDGGKIIEDDGSTDSALLRAGSTIV 259
Query: 197 DLTR-LGKFKILRPGSAKEETIAILEKHSLVE 227
DL++ G F ++R G A T ++L ++ +E
Sbjct: 260 DLSKGDGTFHVVRDGCALTNTTSVLLEYGFIE 291
>gi|56972134|gb|AAH88428.1| Yrdc protein [Rattus norvegicus]
Length = 272
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 131/203 (64%), Gaps = 9/203 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A++ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 66 AVAELRAGAVVAVPTDTLYGLACSASCSAALSCVYRLKGRSEAKPLAVCLGRVADVYRYC 125
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P LL+ L PGPVT+V+ R E L K LNP +G+R+PD F+ +A+
Sbjct: 126 QV-RVPRELLEDLFPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHAFMLDLAQMFGG 182
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS+SV++F++LW + V DGG + P R GSTVVDL+ GKF
Sbjct: 183 PLALTSANLSSQASSLSVEEFQDLWPHLSLVIDGGPIGDSESPECRLGSTVVDLSVPGKF 242
Query: 205 KILRPGSAKEETIAILE-KHSLV 226
I+R G A E T AIL+ K+ L+
Sbjct: 243 GIIRSGCALENTTAILQGKYGLL 265
>gi|332248384|ref|XP_003273344.1| PREDICTED: yrdC domain-containing protein, mitochondrial [Nomascus
leucogenys]
Length = 270
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 141/220 (64%), Gaps = 13/220 (5%)
Query: 9 QVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKG 68
Q ++ +AG TEA A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KG
Sbjct: 48 QAAIPERAGW----TEA-LRAAVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKG 102
Query: 69 RKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLE 128
R PLA+C+G V+D+ R+ +P GLL LLPGPVT+V+ R E L K LNP
Sbjct: 103 RSEAKPLAVCLGRVADVYRYCRV-RVPEGLLKDLLPGPVTLVMERSE--ELNKDLNPFTP 159
Query: 129 SIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-- 186
+G+R+PD F++ +A+ E LALTSANL+ Q SS++V++F++LW + + V DGG +
Sbjct: 160 LVGIRIPDHAFMQDLAQMFEGPLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGD 219
Query: 187 ---PSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKH 223
P R GSTVVDL+ GKF I+RPG A E T AIL++
Sbjct: 220 GQSPECRLGSTVVDLSVPGKFGIIRPGCALESTTAILQQK 259
>gi|351714219|gb|EHB17138.1| YrdC domain-containing protein, mitochondrial [Heterocephalus
glaber]
Length = 276
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 130/204 (63%), Gaps = 12/204 (5%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A++ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 71 AVAELRAGAVVAVPTDTLYGLACSASCSAALDAVYRLKGRSEAKPLAVCLGRVADVYRYC 130
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P LL LLPGPVT+V+ R E L K LNP +G+R+PD F++ +A+
Sbjct: 131 HV-KVPEELLKELLPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHAFMQELAQMCGG 187
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSG-------RAGSTVVDLTRLG 202
LALTSANL+ Q SS+ V++F++LW + V DGG P G R GSTVVDL+ G
Sbjct: 188 PLALTSANLSSQASSLKVEEFQDLWPHLSLVIDGG--PIGDCQSLECRLGSTVVDLSVPG 245
Query: 203 KFKILRPGSAKEETIAILEKHSLV 226
KF I+R G A E T A L+K+ L+
Sbjct: 246 KFGIIRTGCALERTTATLQKYGLL 269
>gi|33339163|gb|AAQ14263.1|AF250397_1 dopamine receptor interacting protein 3, partial [Homo sapiens]
Length = 223
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 132/198 (66%), Gaps = 8/198 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 17 AVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAVCLGRVADVYRYC 76
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P GLL LLPGPVT+V+ R E L K LNP +G+R+PD F++ +A+ E
Sbjct: 77 RV-RVPEGLLKDLLPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHAFMQDLAQMFEG 133
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS++V++F++LW + + V DGG + P R GSTVVDL+ GKF
Sbjct: 134 PLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGDGQSPECRLGSTVVDLSVPGKF 193
Query: 205 KILRPGSAKEETIAILEK 222
I+RPG A E T AIL++
Sbjct: 194 GIIRPGCALESTTAILQQ 211
>gi|55586836|ref|XP_513328.1| PREDICTED: yrdC domain-containing protein, mitochondrial [Pan
troglodytes]
Length = 279
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 132/199 (66%), Gaps = 8/199 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 73 AVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAVCLGRVADVYRYC 132
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P GLL LLPGPVT+V+ R E L K LNP +G+R+PD F++ +A+ E
Sbjct: 133 RV-RVPEGLLKDLLPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHAFMQDLAQMFEG 189
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS++V++F++LW + + V DGG + P R GSTVVDL+ GKF
Sbjct: 190 PLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGDGQSPECRLGSTVVDLSVPGKF 249
Query: 205 KILRPGSAKEETIAILEKH 223
I+RPG A E T AIL++
Sbjct: 250 GIIRPGCALESTTAILQQK 268
>gi|403292161|ref|XP_003937123.1| PREDICTED: yrdC domain-containing protein, mitochondrial, partial
[Saimiri boliviensis boliviensis]
Length = 209
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 133/198 (67%), Gaps = 8/198 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A++ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 3 AVAELRAGAVVAVPTDTLYGLACAASCSAALHAVYRLKGRSEAKPLAVCLGRVADVYRYC 62
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P GLL LLPGPVT+V+ R E N K LNP +G+R+PD F++ +A+ E
Sbjct: 63 RV-RVPEGLLKDLLPGPVTLVMERSEELN--KDLNPFTPLVGIRIPDHAFMQDLAQMFEG 119
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS++V++F++LW + + V DGG + P R GSTVVDL+ GKF
Sbjct: 120 PLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGDGQSPECRLGSTVVDLSVPGKF 179
Query: 205 KILRPGSAKEETIAILEK 222
I+RPG A E T AIL++
Sbjct: 180 GIIRPGCALENTTAILQQ 197
>gi|30909242|gb|AAP37053.1| ischemia/reperfusion inducible protein transcript variant 1 [Homo
sapiens]
gi|30909244|gb|AAP37054.1| ischemia/reperfusion inducible protein transcript variant 2 [Homo
sapiens]
gi|114325461|gb|AAH68057.1| YRDC protein [Homo sapiens]
Length = 270
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 132/199 (66%), Gaps = 8/199 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 64 AVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAVCLGRVADVYRYC 123
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P GLL LLPGPVT+V+ R E L K LNP +G+R+PD F++ +A+ E
Sbjct: 124 RV-RVPEGLLKDLLPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHAFMQDLAQMFEG 180
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS++V++F++LW + + V DGG + P R GSTVVDL+ GKF
Sbjct: 181 PLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGDGQSPECRLGSTVVDLSVPGKF 240
Query: 205 KILRPGSAKEETIAILEKH 223
I+RPG A E T AIL++
Sbjct: 241 GIIRPGCALESTTAILQQK 259
>gi|114325403|gb|AAH08984.3| YRDC protein [Homo sapiens]
Length = 292
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 132/198 (66%), Gaps = 8/198 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 86 AVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAVCLGRVADVYRYC 145
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P GLL LLPGPVT+V+ R E L K LNP +G+R+PD F++ +A+ E
Sbjct: 146 RV-RVPEGLLKDLLPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHAFMQDLAQMFEG 202
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS++V++F++LW + + V DGG + P R GSTVVDL+ GKF
Sbjct: 203 PLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGDGQSPECRLGSTVVDLSVPGKF 262
Query: 205 KILRPGSAKEETIAILEK 222
I+RPG A E T AIL++
Sbjct: 263 GIIRPGCALESTTAILQQ 280
>gi|58761510|ref|NP_078916.3| yrdC domain-containing protein, mitochondrial precursor [Homo
sapiens]
gi|426329015|ref|XP_004025541.1| PREDICTED: yrdC domain-containing protein, mitochondrial [Gorilla
gorilla gorilla]
gi|74750410|sp|Q86U90.1|YRDC_HUMAN RecName: Full=YrdC domain-containing protein, mitochondrial;
AltName: Full=Dopamine receptor-interacting protein 3;
AltName: Full=Ischemia/reperfusion-inducible protein
homolog; Short=hIRIP; Flags: Precursor
gi|30691316|gb|AAO41711.1| YRDC protein [Homo sapiens]
gi|66840171|gb|AAH80186.2| YrdC domain containing (E. coli) [Homo sapiens]
gi|119627722|gb|EAX07317.1| yrdC domain containing (E. coli), isoform CRA_a [Homo sapiens]
Length = 279
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 132/199 (66%), Gaps = 8/199 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 73 AVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAVCLGRVADVYRYC 132
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P GLL LLPGPVT+V+ R E L K LNP +G+R+PD F++ +A+ E
Sbjct: 133 RV-RVPEGLLKDLLPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHAFMQDLAQMFEG 189
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS++V++F++LW + + V DGG + P R GSTVVDL+ GKF
Sbjct: 190 PLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGDGQSPECRLGSTVVDLSVPGKF 249
Query: 205 KILRPGSAKEETIAILEKH 223
I+RPG A E T AIL++
Sbjct: 250 GIIRPGCALESTTAILQQK 268
>gi|73909159|gb|AAH67857.2| YRDC protein [Homo sapiens]
Length = 278
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 132/199 (66%), Gaps = 8/199 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 72 AVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAVCLGRVADVYRYC 131
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P GLL LLPGPVT+V+ R E L K LNP +G+R+PD F++ +A+ E
Sbjct: 132 RV-RVPEGLLKDLLPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHAFMQDLAQMFEG 188
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS++V++F++LW + + V DGG + P R GSTVVDL+ GKF
Sbjct: 189 PLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGDGQSPECRLGSTVVDLSVPGKF 248
Query: 205 KILRPGSAKEETIAILEKH 223
I+RPG A E T AIL++
Sbjct: 249 GIIRPGCALESTTAILQQK 267
>gi|410259458|gb|JAA17695.1| yrdC domain containing [Pan troglodytes]
gi|410297720|gb|JAA27460.1| yrdC domain containing [Pan troglodytes]
Length = 367
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 140/220 (63%), Gaps = 13/220 (5%)
Query: 9 QVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKG 68
Q + +AG TEA A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KG
Sbjct: 145 QAASPERAGW----TEA-LRAAVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKG 199
Query: 69 RKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLE 128
R PLA+C+G V+D+ R+ +P GLL LLPGPVT+V+ R E L K LNP
Sbjct: 200 RSEAKPLAVCLGRVADVYRYCRV-RVPEGLLKDLLPGPVTLVMERSE--ELNKDLNPFTP 256
Query: 129 SIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-- 186
+G+R+PD F++ +A+ E LALTSANL+ Q SS++V++F++LW + + V DGG +
Sbjct: 257 LVGIRIPDHAFMQDLAQMFEGPLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGD 316
Query: 187 ---PSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKH 223
P R GSTVVDL+ GKF I+RPG A E T AIL++
Sbjct: 317 GQSPECRLGSTVVDLSVPGKFGIIRPGCALESTTAILQQK 356
>gi|410211606|gb|JAA03022.1| yrdC domain containing [Pan troglodytes]
Length = 367
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 140/220 (63%), Gaps = 13/220 (5%)
Query: 9 QVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKG 68
Q + +AG TEA A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KG
Sbjct: 145 QAASPERAGW----TEA-LRAAVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKG 199
Query: 69 RKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLE 128
R PLA+C+G V+D+ R+ +P GLL LLPGPVT+V+ R E L K LNP
Sbjct: 200 RSEAKPLAVCLGRVADVYRYCRV-RVPEGLLKDLLPGPVTLVMERSE--ELNKDLNPFTP 256
Query: 129 SIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-- 186
+G+R+PD F++ +A+ E LALTSANL+ Q SS++V++F++LW + + V DGG +
Sbjct: 257 LVGIRIPDHAFMQDLAQMFEGPLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGD 316
Query: 187 ---PSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKH 223
P R GSTVVDL+ GKF I+RPG A E T AIL++
Sbjct: 317 GQSPECRLGSTVVDLSVPGKFGIIRPGCALESTTAILQQK 356
>gi|62751448|ref|NP_001015837.1| yrdC domain containing [Xenopus (Silurana) tropicalis]
gi|58476879|gb|AAH90125.1| yrdC domain containing [Xenopus (Silurana) tropicalis]
Length = 238
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 126/192 (65%), Gaps = 8/192 (4%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
L+ G VIAVPTDT+YG AC A +S++++ IY +KGR T PLAICVG+V DI R+
Sbjct: 40 LQQGGVIAVPTDTIYGIACLAQNSQSISNIYNVKGRNGTKPLAICVGNVDDIYRYCQV-R 98
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
+P LL LLPGPVT+V+ R S L K LNP +GVR+PD F+R +A LAL
Sbjct: 99 VPDQLLRDLLPGPVTLVMER--SDRLNKELNPFTSLVGVRIPDHAFIRQLAEVCSEPLAL 156
Query: 154 TSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKFKILR 208
TSAN++ Q S+++V++F +LW + + V DGG + P R GSTVVDL+ GKF ++R
Sbjct: 157 TSANISSQDSTLTVEEFRDLWPKLSLVVDGGPIGELSSPECRLGSTVVDLSVPGKFTVIR 216
Query: 209 PGSAKEETIAIL 220
G A T+ IL
Sbjct: 217 DGCALTSTVDIL 228
>gi|359321263|ref|XP_003639549.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Canis lupus familiaris]
Length = 274
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/228 (46%), Positives = 144/228 (63%), Gaps = 15/228 (6%)
Query: 17 GLVRPATEAHA------EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRK 70
G VR A+ A A+ L++G V+ VPTDTLYG AC A S A++ +Y +KGR
Sbjct: 47 GAVRAASPERAGWTEALRAAVSELRSGAVVTVPTDTLYGQACAASCSAALDAVYRLKGRS 106
Query: 71 HTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESI 130
H PLA+C+G V+D+ R+ +P GLL LLPGPVT+VL R S L + LNP +
Sbjct: 107 HAKPLAVCLGRVADVYRYCRVS-VPEGLLRDLLPGPVTLVLER--SQELNRDLNPCTPLV 163
Query: 131 GVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL---- 186
GVR+PD F++ +A+ LALTSANL+ Q SS++V++F++LW + + V DGG +
Sbjct: 164 GVRIPDHAFIQDLAQVFGEPLALTSANLSSQASSLTVEEFQDLWPQLSLVIDGGPIGDGQ 223
Query: 187 -PSGRAGSTVVDLTRLGKFKILRPGSAKEETIAIL-EKHSLVEEPAAG 232
P R GSTVVDL+ GKF I+RPG A E T AIL +K+ L+ +G
Sbjct: 224 SPEYRLGSTVVDLSVPGKFGIIRPGCALESTTAILRQKYGLLPSHGSG 271
>gi|297665439|ref|XP_002811084.1| PREDICTED: yrdC domain-containing protein, mitochondrial [Pongo
abelii]
Length = 350
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 132/198 (66%), Gaps = 8/198 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 144 AVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAVCLGRVADVYRYC 203
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P GLL LLPGPVT+V+ R E L K LNP +G+R+PD F++ +A+ E
Sbjct: 204 RV-RVPEGLLKDLLPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHAFMQDLAQMFEG 260
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS++V++F++LW + + V DGG + P R GSTVVDL+ GKF
Sbjct: 261 PLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGDGQSPECRLGSTVVDLSVPGKF 320
Query: 205 KILRPGSAKEETIAILEK 222
I+RPG A E T AIL++
Sbjct: 321 GIIRPGCALESTTAILQQ 338
>gi|351542198|ref|NP_001082498.2| yrdC domain containing [Xenopus laevis]
Length = 259
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 126/192 (65%), Gaps = 8/192 (4%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
L+ G VI VPTDT+YG AC A +S++++ IY +KGR T PLAICVG+V DI R+ +
Sbjct: 61 LQQGGVIGVPTDTIYGIACLAQNSQSISNIYNVKGRNGTKPLAICVGNVEDIYRYCRVN- 119
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
+P LL LLPGPVT+V+ R S L K LNP +GVR+PD F+R +A LAL
Sbjct: 120 VPDQLLRDLLPGPVTLVMER--SDRLNKELNPFTSLVGVRIPDHAFIRQLAEVCSEPLAL 177
Query: 154 TSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKFKILR 208
TSAN++ Q S+++V++F +LW + + V DGG + P R GSTVVDL+ GKF ++R
Sbjct: 178 TSANISSQESTLTVEEFRDLWPKLSLVVDGGPIGEHSSPECRLGSTVVDLSVPGKFTVIR 237
Query: 209 PGSAKEETIAIL 220
G A T+ IL
Sbjct: 238 DGCALTHTVDIL 249
>gi|49118602|gb|AAH73618.1| LOC398509 protein [Xenopus laevis]
Length = 236
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 133/218 (61%), Gaps = 13/218 (5%)
Query: 13 ENKAGLVRPATEAHAEEAIQ-----ALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIK 67
EN RP + + I L+ G VI VPTDT+YG AC A +S++++ IY +K
Sbjct: 12 ENGRCTSRPTRDMKGWKEILNTSLGILQQGGVIGVPTDTIYGIACLAQNSQSISNIYNVK 71
Query: 68 GRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGL 127
GR T PLAICVG+V DI R+ + +P LL LLPGPVT+V+ R S L K LNP
Sbjct: 72 GRNGTKPLAICVGNVEDIYRYCRVN-VPDQLLRDLLPGPVTLVMER--SDRLNKELNPFT 128
Query: 128 ESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL- 186
+GVR+PD F+R +A LALTSAN++ Q S+++V++F +LW + + V DGG +
Sbjct: 129 SLVGVRIPDHAFIRQLAEVCSEPLALTSANISSQESTLTVEEFRDLWPKLSLVVDGGPIG 188
Query: 187 ----PSGRAGSTVVDLTRLGKFKILRPGSAKEETIAIL 220
P R GSTVVDL+ GKF ++R G A T+ IL
Sbjct: 189 EHSSPECRLGSTVVDLSVPGKFTVIRDGCALTHTVDIL 226
>gi|307212489|gb|EFN88220.1| YrdC domain-containing protein, mitochondrial [Harpegnathos
saltator]
Length = 243
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 132/197 (67%), Gaps = 7/197 (3%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
L+ KVIAVPTDT+YG AC A S+EA+ R+Y+IK R P+AIC+ +V D+ ++AVTD+
Sbjct: 45 LQQNKVIAVPTDTIYGLACLASSTEAIERLYQIKKRDERKPVAICLSNVKDVTQWAVTDN 104
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
LP LL+ LLPGP T++L SNL +LNP +++IG+RVP S F+R IA+ + +AL
Sbjct: 105 LPSCLLEKLLPGPYTIILK--HKSNLNPALNPDIDNIGIRVPSSRFMRSIAK-IVGPIAL 161
Query: 154 TSANLTGQPSSVSVKDFENLW-ERCACVYDGGVLP---SGRAGSTVVDLTRLGKFKILRP 209
TSAN++ +PS++ +F LW E YD + + R GSTVVDL++ G +KI+R
Sbjct: 162 TSANISNKPSTLYPDEFSMLWPELDGIFYDLTCMKRTNAHRVGSTVVDLSQPGFYKIVRH 221
Query: 210 GSAKEETIAILEKHSLV 226
G A + I++K L+
Sbjct: 222 GIAAHIILGIMQKAGLI 238
>gi|115495697|ref|NP_001069018.1| yrdC domain-containing protein, mitochondrial precursor [Bos
taurus]
gi|122145558|sp|Q0VC80.1|YRDC_BOVIN RecName: Full=YrdC domain-containing protein, mitochondrial; Flags:
Precursor
gi|111307172|gb|AAI20308.1| YrdC domain containing (E. coli) [Bos taurus]
gi|296488877|tpg|DAA30990.1| TPA: yrdC domain-containing protein, mitochondrial precursor [Bos
taurus]
Length = 276
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 135/202 (66%), Gaps = 8/202 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A SEA+ +Y +KGR T PLA+C+G V+D+ R+
Sbjct: 71 AVAELRAGAVVAVPTDTLYGLACSASCSEALGAVYRVKGRSETKPLAVCLGRVADVYRYC 130
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P GLL LLPGPVT+V+ R E L K LNP +G+R+PD F++ +A+
Sbjct: 131 HV-RVPEGLLKDLLPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHAFMQDLAQMFGG 187
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS++V++F++LW + + DGG + P R GSTVVDL+ GKF
Sbjct: 188 PLALTSANLSSQSSSLNVEEFQDLWPHLSLIIDGGPIGDGQSPECRLGSTVVDLSVPGKF 247
Query: 205 KILRPGSAKEETIAILEKHSLV 226
I+RPG A E T AIL+++ L+
Sbjct: 248 GIIRPGCALESTSAILQEYGLL 269
>gi|195401705|ref|XP_002059453.1| GJ18829 [Drosophila virilis]
gi|194142459|gb|EDW58865.1| GJ18829 [Drosophila virilis]
Length = 259
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 129/204 (63%), Gaps = 7/204 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A Q L G+VI +PTDT+YG ACDA + EA+ R+YEIKGR P+AICV +++ + R+
Sbjct: 53 AEQCLHLGQVIGLPTDTVYGLACDANNEEAIQRLYEIKGRDEHKPVAICVNNIAALRRYG 112
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRG-ESSNLEKSLNPGLESIGVRVPDSNFVR-VIARGL 147
HL LL LLPGP+T+++ R + SN + LNP IG+R+PD F+R + A
Sbjct: 113 QASHLSDELLTRLLPGPLTIIVERSPQLSN--RFLNPSTTKIGIRIPDYKFMRDLCATWH 170
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL---PSGRAGSTVVDLTRLGKF 204
E LALTSAN + PSS+ V +F++LW + V+D G + R STV+DL + G +
Sbjct: 171 EQPLALTSANRSSAPSSLQVSEFQSLWPQLGAVFDAGRIGQTEERRLASTVIDLAKPGSY 230
Query: 205 KILRPGSAKEETIAILEKHSLVEE 228
I+R G A ++T+A+L + V++
Sbjct: 231 SIVRAGVALKQTLAVLHEFGYVKQ 254
>gi|348526097|ref|XP_003450557.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Oreochromis niloticus]
Length = 267
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 129/200 (64%), Gaps = 5/200 (2%)
Query: 31 IQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAV 90
++ALK G ++AVPTDT+YG AC A +S+AV + Y+ KGR PLAICVG++ DI ++
Sbjct: 67 VKALKEGHIVAVPTDTIYGLACLAQNSDAVRKTYDTKGRNGQKPLAICVGEIQDIYKYCK 126
Query: 91 TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA 150
LL LLPGPVT+V R E N + LNP +GVR+PD F+R + +
Sbjct: 127 VKVKKE-LLGDLLPGPVTLVFERSEELNTD--LNPFTSLVGVRIPDHPFMRQLCQMCGEP 183
Query: 151 LALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-PSGRAGSTVVDLTRLGKFKILRP 209
LALTSAN++ Q S+V V +F+ LW + A V DGG + R GSTVVDL+ LGK++I+RP
Sbjct: 184 LALTSANISSQTSTVEVHEFQELWPKLAVVVDGGPIGDQSRLGSTVVDLSVLGKYRIIRP 243
Query: 210 GSAKEETIAILE-KHSLVEE 228
G A T+ +L+ K+ L E
Sbjct: 244 GCALSSTVDVLKHKYGLSEH 263
>gi|432910347|ref|XP_004078322.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Oryzias latipes]
Length = 265
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 130/200 (65%), Gaps = 5/200 (2%)
Query: 31 IQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAV 90
++AL+ G ++AVPTDT+YG AC A +SEAV +IY +KGR PLAICV ++ DI ++
Sbjct: 65 VKALQDGHIVAVPTDTIYGLACLAQNSEAVRKIYAVKGRNGQKPLAICVREIQDIYKYCK 124
Query: 91 TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA 150
+ + LL LLPGPVT+V R E+ L +LNP +GVR+P+ F+R + + E
Sbjct: 125 VE-VKKELLGDLLPGPVTLVFKRSET--LNPALNPFTSLVGVRIPNHGFMRRLCQMCEEP 181
Query: 151 LALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-PSGRAGSTVVDLTRLGKFKILRP 209
LALTSAN++ S+V V +F+ LW A V DGG + R GSTVVDL+ K++I+RP
Sbjct: 182 LALTSANVSSHTSTVEVHEFQELWPHVAVVVDGGPIGDQSRLGSTVVDLSVCNKYRIIRP 241
Query: 210 GSAKEETIAILE-KHSLVEE 228
G A T+ +LE K+ L E+
Sbjct: 242 GCALSVTLDVLERKYGLSED 261
>gi|158285728|ref|XP_308435.3| AGAP007397-PA [Anopheles gambiae str. PEST]
gi|157020133|gb|EAA04653.3| AGAP007397-PA [Anopheles gambiae str. PEST]
Length = 272
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 127/199 (63%), Gaps = 4/199 (2%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G+VIA+PTDT+YG C A + EA++R+Y IKGR P+AICV + D+ ++
Sbjct: 71 AVAKLQAGEVIAIPTDTVYGLTCSANNPEAIHRLYNIKGRHELKPVAICVASIEDVRQWG 130
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
TDHL LL L PG VT+V+ R N +LNPG+ +IG+R+ ++ F++ + +
Sbjct: 131 ETDHLNDELLGELFPGAVTLVVRRSSKLN-NPALNPGVANIGIRITENKFIQHVCEAFQQ 189
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL---PSGRAGSTVVDLTRLGKFKI 206
+ALTSAN + S+++V++F+ LW V+DGG L RA STV+DL+ ++KI
Sbjct: 190 PIALTSANKSSSKSTLNVEEFKELWGELGAVFDGGQLGLSEEQRAASTVIDLSEPERYKI 249
Query: 207 LRPGSAKEETIAILEKHSL 225
+R G + E+ I +E+H+
Sbjct: 250 IRWGVSVEKIIKTVERHNF 268
>gi|57032998|gb|AAH88928.1| LOC496333 protein, partial [Xenopus laevis]
Length = 204
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/193 (47%), Positives = 126/193 (65%), Gaps = 8/193 (4%)
Query: 33 ALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTD 92
L+ G VI VPTDT+YG AC A +S++++ IY +KGR T PLAICVG+V DI R+
Sbjct: 5 GLQQGGVIGVPTDTIYGIACLAQNSQSISNIYNVKGRNGTKPLAICVGNVEDIYRYCQV- 63
Query: 93 HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
++P LL LLPGPVT+V+ R S L K LNP +GVR+PD F+R +A LA
Sbjct: 64 NVPDQLLRDLLPGPVTLVMER--SGRLNKELNPFTSLVGVRIPDHAFIRQLAEVCSEPLA 121
Query: 153 LTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKFKIL 207
LTSAN++ Q S+++V++F +LW + + V DGG + P R GSTVVDL+ GKF ++
Sbjct: 122 LTSANISSQESTLTVEEFRDLWPKLSLVVDGGPIGEVSSPECRLGSTVVDLSVPGKFIVI 181
Query: 208 RPGSAKEETIAIL 220
R G + T+ IL
Sbjct: 182 RDGCSLIPTVDIL 194
>gi|307186184|gb|EFN71890.1| YrdC domain-containing protein, mitochondrial [Camponotus
floridanus]
Length = 248
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 129/201 (64%), Gaps = 8/201 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A Q L+ GK+IA+PTDT+YG A A + AV R+YEIK R + PLAIC+ +V +I +
Sbjct: 41 AAQLLQQGKIIAIPTDTIYGLAGVAVNPLAVQRLYEIKRRDGSKPLAICLSNVKEIGTWG 100
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
V D +P G+L+ LLPGP T+ L R +S L KS NPG E++G+RVPD+ FVR +A+ +
Sbjct: 101 VLDDVPSGMLECLLPGPCTICLRR--TSALPKSFNPGQETVGIRVPDNKFVRSVAK-IVG 157
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVY-----DGGVLPSGRAGSTVVDLTRLGKF 204
LALTSAN++ +PSS+ +F LW + V+ L S R GSTVVDL+ G +
Sbjct: 158 PLALTSANISSEPSSLYPDEFRALWPKLDGVFHETSNSNKRLESRRVGSTVVDLSTPGYY 217
Query: 205 KILRPGSAKEETIAILEKHSL 225
+I+R G A I +L K+ L
Sbjct: 218 RIVRHGIAGNIIINVLNKYGL 238
>gi|195486789|ref|XP_002091655.1| GE13782 [Drosophila yakuba]
gi|194177756|gb|EDW91367.1| GE13782 [Drosophila yakuba]
Length = 251
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 131/210 (62%), Gaps = 7/210 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
EA + A Q L +G+VIA+PTDT+YG ACDA + A+ R+YEIKGR P+AICV +++
Sbjct: 41 EAALQLARQCLLSGQVIALPTDTVYGLACDANNETAIQRLYEIKGRDEHKPVAICVHNIA 100
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSR-GESSNLEKSLNPGLESIGVRVPDSNFVR- 141
+ RF HL LL LLPGP+T+V+ R + SN + LNP IG+R+PD NF+R
Sbjct: 101 ALRRFGQAAHLSDELLTRLLPGPLTIVIERTAQLSN--RFLNPSTSKIGIRIPDFNFIRD 158
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL---PSGRAGSTVVDL 198
+ A E LALTSAN + PSS+ V +F +LW + V+D G + R STV+DL
Sbjct: 159 LCAVWHEQPLALTSANRSSAPSSLQVVEFRSLWPQLGAVFDAGQIGLTEERRLASTVIDL 218
Query: 199 TRLGKFKILRPGSAKEETIAILEKHSLVEE 228
F+I+R G A + T++++E+ + E
Sbjct: 219 ATPSYFEIVRAGVALKPTLSLMEEFGIRER 248
>gi|195119554|ref|XP_002004296.1| GI19851 [Drosophila mojavensis]
gi|193909364|gb|EDW08231.1| GI19851 [Drosophila mojavensis]
Length = 228
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 128/203 (63%), Gaps = 5/203 (2%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A Q L+ GKVIA+PTDT+YG ACDA + +A+ R+YEIKGR P+AICV +++ + R+
Sbjct: 23 AEQCLQLGKVIALPTDTVYGLACDANNEQAIQRLYEIKGRDEHKPVAICVNNITALRRYG 82
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR-VIARGLE 148
HL LL LLPGP+T+++ + + LNP IG+R+PD F+R + AR E
Sbjct: 83 QASHLSDELLTRLLPGPLTIIVEHTPHLS-NRYLNPSTSKIGIRIPDFQFIRDLCARWHE 141
Query: 149 SALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL---PSGRAGSTVVDLTRLGKFK 205
LALTSAN + +PSS+ + +F+ LW + ++D G + R STV+DL G ++
Sbjct: 142 QPLALTSANRSSEPSSLEIIEFQALWPQLGAIFDAGRIGQTEERRLASTVIDLANPGCYE 201
Query: 206 ILRPGSAKEETIAILEKHSLVEE 228
I+R G A ++T+++L + V +
Sbjct: 202 IVRAGVALKQTLSVLHEFGYVNQ 224
>gi|194881657|ref|XP_001974938.1| GG20842 [Drosophila erecta]
gi|190658125|gb|EDV55338.1| GG20842 [Drosophila erecta]
Length = 251
Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 128/204 (62%), Gaps = 7/204 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
EA A Q L +G+VIA+PTDT+YG ACDA + A+ R+YEIKGR P+AICV ++
Sbjct: 41 EAALRLARQCLLSGQVIALPTDTVYGLACDANNETAIQRLYEIKGRDEHKPVAICVHNIE 100
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSR-GESSNLEKSLNPGLESIGVRVPDSNFVR- 141
+ RF HL LL LLPGP+T+V+ R + SN + LNP IG+R+PD NF+R
Sbjct: 101 ALRRFGQAVHLSDELLTRLLPGPLTIVIERTAQLSN--RFLNPSTSKIGIRIPDFNFMRD 158
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL---PSGRAGSTVVDL 198
+ A E LALTSAN + PSS+ V +F +LW + V+D G + R STV+DL
Sbjct: 159 LCAVWHEQPLALTSANRSSAPSSLQVSEFRSLWPQLGAVFDAGQIGLTEERRLASTVIDL 218
Query: 199 TRLGKFKILRPGSAKEETIAILEK 222
G F+I+R G A + T++++E+
Sbjct: 219 ATPGYFEIVRAGVALKPTLSLMEE 242
>gi|332017466|gb|EGI58189.1| YrdC domain-containing protein, mitochondrial [Acromyrmex
echinatior]
Length = 263
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 129/201 (64%), Gaps = 8/201 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A++ L+ GKVIAVPTDT+YG AC A S A+ R+YEIK R PLAIC+ +V ++ +
Sbjct: 60 AVELLQQGKVIAVPTDTVYGLACLAADSHAIQRLYEIKQRDERKPLAICLSNVKEVGIWG 119
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ D++P G+L LLPGP T+ L R + L K+LNPG++++G+RVP+ F+R +A+ +
Sbjct: 120 IIDNIPAGMLKDLLPGPYTICLRR--TPALNKNLNPGIDTVGIRVPNDKFIRSVAQ-IVG 176
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGV-----LPSGRAGSTVVDLTRLGKF 204
LALTSAN++ + SS+ +F LW V+ + R GSTVVD+++LG +
Sbjct: 177 PLALTSANVSNELSSLHPNEFRALWPELDGVFHSSTNSKKQTDARRIGSTVVDVSKLGCY 236
Query: 205 KILRPGSAKEETIAILEKHSL 225
I+R G + I ILEK+ L
Sbjct: 237 SIMRRGISAHVIIRILEKYRL 257
>gi|195429998|ref|XP_002063044.1| GK21591 [Drosophila willistoni]
gi|194159129|gb|EDW74030.1| GK21591 [Drosophila willistoni]
Length = 222
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 127/204 (62%), Gaps = 9/204 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A Q L G++IA+PTDT+YG ACDA + +A+ R+YEIKGR P+AICV ++ + R+
Sbjct: 18 ARQCLLAGQIIALPTDTVYGLACDANNEQAIQRLYEIKGRDEHKPVAICVHNIKALRRYG 77
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR-VIARGLE 148
DHL LL LLPGP+T+V+ R + + LNP IG+R+PD F+R + E
Sbjct: 78 QADHLGDELLTRLLPGPLTIVIERAPALS-NPLLNPSTSKIGIRIPDFQFIRKLCGVWHE 136
Query: 149 SALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSG-----RAGSTVVDLTRLGK 203
LALTSAN + +PSS+ V++F LW + ++D G P G R STV+DL + G
Sbjct: 137 QPLALTSANRSSEPSSLQVEEFRCLWPQLGGIFDAG--PIGLTEERRLASTVIDLAKPGS 194
Query: 204 FKILRPGSAKEETIAILEKHSLVE 227
+ I+R G A +ET +LE++ L E
Sbjct: 195 YTIVRAGVALKETRKVLEEYGLKE 218
>gi|195585167|ref|XP_002082361.1| GD25261 [Drosophila simulans]
gi|194194370|gb|EDX07946.1| GD25261 [Drosophila simulans]
Length = 248
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 128/204 (62%), Gaps = 7/204 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
EA + A Q L G+VIA+PTDT+YG ACDA + A+ R+YEIKGR P+AICV ++
Sbjct: 38 EAALQLARQCLLGGQVIALPTDTVYGLACDANNETAIQRLYEIKGRDEHKPVAICVHNIE 97
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSR-GESSNLEKSLNPGLESIGVRVPDSNFVR- 141
+ RF HL LL LLPGP+T+V+ R + SN + LNP IG+R+PD NF+R
Sbjct: 98 ALRRFGQAAHLSDELLTRLLPGPLTIVIERTAQLSN--RFLNPSTSKIGIRIPDFNFMRD 155
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDG---GVLPSGRAGSTVVDL 198
+ A E LALTSAN + PSS+ V +F +LW + V+D G+ R STV+DL
Sbjct: 156 LCAVWQEQPLALTSANRSSAPSSLQVSEFRSLWPQLGAVFDAGRIGLTEERRLASTVIDL 215
Query: 199 TRLGKFKILRPGSAKEETIAILEK 222
G F+I+R G A + T++++++
Sbjct: 216 ATPGYFEIVRAGVALKPTLSLMDE 239
>gi|78707274|ref|NP_001027444.1| CG33786 [Drosophila melanogaster]
gi|17946164|gb|AAL49123.1| RE55868p [Drosophila melanogaster]
gi|71911685|gb|AAF57437.2| CG33786 [Drosophila melanogaster]
gi|220948934|gb|ACL87010.1| CG33786-PA [synthetic construct]
gi|220957748|gb|ACL91417.1| CG33786-PA [synthetic construct]
Length = 248
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 130/209 (62%), Gaps = 7/209 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
EA + A Q L G+VIA+PTDT+YG ACDA + A+ ++YEIKGR P+AICV ++
Sbjct: 38 EAALQLARQCLLGGQVIALPTDTVYGLACDANNETAIQQLYEIKGRDEHKPVAICVHNID 97
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSR-GESSNLEKSLNPGLESIGVRVPDSNFVR- 141
+ RF HL LL LLPGP+T+V+ R + SN + LNP IG+R+PD NF+R
Sbjct: 98 ALRRFGQAAHLSDELLTRLLPGPLTIVIERTSQLSN--RFLNPSTSKIGIRIPDFNFMRD 155
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDG---GVLPSGRAGSTVVDL 198
+ A E LALTSAN + PSS+ V +F +LW + V+D G+ R STV+DL
Sbjct: 156 LCAVWQEKPLALTSANRSSAPSSLQVSEFRSLWPQLGAVFDAGRIGLTEERRLASTVIDL 215
Query: 199 TRLGKFKILRPGSAKEETIAILEKHSLVE 227
G ++I+R G A + T++++E+ + E
Sbjct: 216 ATPGYYEIVRAGVALKPTLSLMEEFGIRE 244
>gi|247494089|ref|NP_705794.2| yrdC domain-containing protein, mitochondrial precursor [Mus
musculus]
gi|123794224|sp|Q3U5F4.1|YRDC_MOUSE RecName: Full=YrdC domain-containing protein, mitochondrial;
AltName: Full=Ischemia/reperfusion-inducible protein;
Short=mIRIP; Flags: Precursor
gi|74146564|dbj|BAE32125.1| unnamed protein product [Mus musculus]
Length = 280
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 130/199 (65%), Gaps = 8/199 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A SS A++ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 74 AVAELRAGAVVAVPTDTLYGLACSASSSAALSCVYRLKGRSEAKPLAVCLGRVADVYRYC 133
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P LL+ L PGPVT+V+ R E L K LNP +G+R+PD F+ +A+
Sbjct: 134 QV-RVPRELLEDLFPGPVTLVMERSE--ELNKDLNPFTRLVGIRIPDHAFMLDLAQMFGG 190
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS+SV++F++LW + V DGG + P R GSTVVDL+ GKF
Sbjct: 191 PLALTSANLSSQASSLSVEEFQDLWPHLSLVIDGGPIGDSQSPECRLGSTVVDLSVPGKF 250
Query: 205 KILRPGSAKEETIAILEKH 223
I+RPG A E T +IL++
Sbjct: 251 GIIRPGCALENTTSILQQK 269
>gi|23274116|gb|AAH23823.1| YrdC domain containing (E.coli) [Mus musculus]
Length = 263
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 130/199 (65%), Gaps = 8/199 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A SS A++ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 57 AVAELRAGAVVAVPTDTLYGLACSASSSAALSCVYRLKGRSEAKPLAVCLGRVADVYRYC 116
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P LL+ L PGPVT+V+ R E L K LNP +G+R+PD F+ +A+
Sbjct: 117 QV-RVPRELLEDLFPGPVTLVMERSE--ELNKDLNPFTRLVGIRIPDHAFMLDLAQMFGG 173
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS+SV++F++LW + V DGG + P R GSTVVDL+ GKF
Sbjct: 174 PLALTSANLSSQASSLSVEEFQDLWPHLSLVIDGGPIGDSQSPECRLGSTVVDLSVPGKF 233
Query: 205 KILRPGSAKEETIAILEKH 223
I+RPG A E T +IL++
Sbjct: 234 GIIRPGCALENTTSILQQK 252
>gi|148698400|gb|EDL30347.1| yrdC domain containing (E.coli) [Mus musculus]
Length = 263
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 130/199 (65%), Gaps = 8/199 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A SS A++ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 57 AVAELRAGAVVAVPTDTLYGLACSASSSAALSCVYRLKGRSEAKPLAVCLGRVADVYRYC 116
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P LL+ L PGPVT+V+ R E L K LNP +G+R+PD F+ +A+
Sbjct: 117 QV-RVPRELLEDLFPGPVTLVMERSE--ELNKDLNPFTRLVGIRIPDHAFMLDLAQMFGG 173
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS+SV++F++LW + V DGG + P R GSTVVDL+ GKF
Sbjct: 174 PLALTSANLSSQASSLSVEEFQDLWPHLSLVIDGGPIGDSQSPECRLGSTVVDLSVPGKF 233
Query: 205 KILRPGSAKEETIAILEKH 223
I+RPG A E T +IL++
Sbjct: 234 GIIRPGCALENTTSILQQK 252
>gi|242011385|ref|XP_002426431.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510536|gb|EEB13693.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 244
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 128/214 (59%), Gaps = 5/214 (2%)
Query: 1 MAFSLENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAV 60
M FS + S N ++ + A A L GKVIA+PTDT+YG A ++ +
Sbjct: 1 MFFSRKYQHTSNVNNPSIISILEVSAASTAANLLFEGKVIAIPTDTIYGIAASTQNNYGL 60
Query: 61 NRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLE 120
++YEIK R PL+ICV D S+I + T HL LL+ LLPGPVT+VL R L
Sbjct: 61 KKLYEIKKRDLNKPLSICVSDTSEIKLWGETSHLNERLLEDLLPGPVTIVLKR--KGLLN 118
Query: 121 KSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACV 180
+NP + IG+R+P++NFV+ ++R +ALTSAN++ + S + + DF +LW + +
Sbjct: 119 SFVNPNTDLIGIRIPNTNFVQALSRLCTVPIALTSANISFEQSPIEINDFIHLWPKLDAI 178
Query: 181 YDGGVL---PSGRAGSTVVDLTRLGKFKILRPGS 211
+DGGV+ P RAGSTVVDL+ G + I+R G+
Sbjct: 179 FDGGVISNSPLQRAGSTVVDLSEPGHYNIIREGN 212
>gi|30908964|gb|AAP37032.1| ischemia/reperfusion inducible protein [Mus musculus]
Length = 263
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 130/199 (65%), Gaps = 8/199 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A SS A++ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 57 AVAELRAGAVVAVPTDTLYGLACSASSSAALSCVYRLKGRSEAKPLAVCLGRVADVYRYC 116
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P LL+ L PGPVT+V+ R E L K LNP +G+R+PD F+ +A+
Sbjct: 117 QV-RVPRELLEDLFPGPVTLVMERSE--ELNKDLNPFTRLVGIRIPDHAFMLDLAQMFGG 173
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS+SV++F++LW + V DGG + P R GSTVVDL+ GKF
Sbjct: 174 PLALTSANLSSQASSLSVEEFQDLWPHLSLVIDGGPIGDSQSPECRLGSTVVDLSVPGKF 233
Query: 205 KILRPGSAKEETIAILEKH 223
I+RPG A E T +IL++
Sbjct: 234 GIIRPGCALENTTSILQQK 252
>gi|281349712|gb|EFB25296.1| hypothetical protein PANDA_013165 [Ailuropoda melanoleuca]
Length = 187
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 118/182 (64%), Gaps = 8/182 (4%)
Query: 46 TLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPG 105
TLYG AC A SEA+ +Y +KGR PLA+C+G V+D+ R+ +P GLL LLPG
Sbjct: 1 TLYGLACSASCSEALGAVYRLKGRSEAKPLAVCLGRVADVYRYCHV-RVPEGLLKDLLPG 59
Query: 106 PVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSV 165
PVT+VL R E L K LNP +G+R+PD F++ + + LALTSANL+ Q SS+
Sbjct: 60 PVTLVLERSE--ELNKDLNPFTPLVGIRIPDHAFIQDLVQVFGGPLALTSANLSSQASSL 117
Query: 166 SVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKFKILRPGSAKEETIAIL 220
+V++F++LW + + V DGG + P R GSTVVDL+ GKF I+RPG A E T AIL
Sbjct: 118 NVEEFQDLWPQLSLVIDGGPIGDGQSPEYRLGSTVVDLSVPGKFGIIRPGCALESTTAIL 177
Query: 221 EK 222
+
Sbjct: 178 HR 179
>gi|443706491|gb|ELU02517.1| hypothetical protein CAPTEDRAFT_171446 [Capitella teleta]
Length = 246
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 133/215 (61%), Gaps = 6/215 (2%)
Query: 14 NKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTS 73
+K G + + + A QAL+ +IAVPTDT+YG A A S AV +Y+ KGR T+
Sbjct: 32 DKIGKILTDSSSLICRACQALQEEGIIAVPTDTIYGIAGLAQSPNAVLSLYQTKGRASTN 91
Query: 74 PLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVR 133
P++ICV D+ DI ++ + LL LLPGPVTVV R + L LNPG+ +G+R
Sbjct: 92 PMSICVADIEDIYKWGKVT-ISQSLLTQLLPGPVTVVFQR--TPELNPQLNPGVPLVGIR 148
Query: 134 VPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLP---SGR 190
+P+ NFVR I R LALTSAN +G S +++++F +LW + + DGG L R
Sbjct: 149 IPNYNFVRNICRSAGGPLALTSANKSGGLSPLNIEEFRDLWSNLSVICDGGTLAMSEKDR 208
Query: 191 AGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSL 225
GSTVVDL+ G ++I+R GSA++ET+ +L ++ L
Sbjct: 209 LGSTVVDLSSKGHYRIIRSGSAEKETVGLLVENGL 243
>gi|380798151|gb|AFE70951.1| yrdC domain-containing protein, mitochondrial precursor, partial
[Macaca mulatta]
gi|380798153|gb|AFE70952.1| yrdC domain-containing protein, mitochondrial precursor, partial
[Macaca mulatta]
Length = 223
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 131/198 (66%), Gaps = 8/198 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 17 AVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAVCLGRVADVYRYC 76
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P GLL LLPGPVT+V+ R E N K LNP +G+R+PD F++ +A+ E
Sbjct: 77 RV-RVPEGLLKDLLPGPVTLVMERSEELN--KDLNPFTPLVGIRIPDHAFMQDLAQMFEG 133
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS++V++F +LW + + V DGG + P R GSTVVDL+ GKF
Sbjct: 134 PLALTSANLSSQASSLNVEEFRDLWPQLSLVIDGGQIGGGQSPECRLGSTVVDLSVPGKF 193
Query: 205 KILRPGSAKEETIAILEK 222
I+RPG A E T AIL++
Sbjct: 194 GIIRPGCALESTTAILQQ 211
>gi|195029409|ref|XP_001987565.1| GH19895 [Drosophila grimshawi]
gi|193903565|gb|EDW02432.1| GH19895 [Drosophila grimshawi]
Length = 250
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 126/208 (60%), Gaps = 7/208 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A Q L+ GKVIA+PTDT+YG ACDA + EA+ R+YEIKGR P+AICV + + R+
Sbjct: 43 AEQCLQLGKVIALPTDTVYGLACDANNEEAIQRLYEIKGRDAHKPVAICVNTIGALRRYG 102
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRG-ESSNLEKSLNPGLESIGVRVPDSNFVR-VIARGL 147
HL LL LLPGP+T+V+ R + SN + LNP IG+R+PD F+R +
Sbjct: 103 QASHLSDELLTRLLPGPLTIVIERTPQLSN--RFLNPSTTRIGIRIPDFKFMRDLCGTWH 160
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL---PSGRAGSTVVDLTRLGKF 204
E LALTSAN + PSS+ + +F+ LW + V+D G + R STV+DL G +
Sbjct: 161 EQPLALTSANRSSAPSSLHISEFQALWPQLGAVFDAGRIGLSEERRLASTVIDLVTPGCY 220
Query: 205 KILRPGSAKEETIAILEKHSLVEEPAAG 232
I+R G A ++T+A+L + V + G
Sbjct: 221 DIVRSGVALKQTLAVLHEFGYVAKSQLG 248
>gi|297283021|ref|XP_002802371.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like,
partial [Macaca mulatta]
Length = 268
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 131/199 (65%), Gaps = 8/199 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 62 AVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAVCLGRVADVYRYC 121
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P GLL LLPGPVT+V+ R E L K LNP +G+R+PD F++ +A+ E
Sbjct: 122 RV-RVPEGLLKDLLPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHAFMQDLAQMFEG 178
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS++V++F +LW + + V DGG + P R GSTVVDL+ GKF
Sbjct: 179 PLALTSANLSSQASSLNVEEFRDLWPQLSLVIDGGQIGGGQSPECRLGSTVVDLSVPGKF 238
Query: 205 KILRPGSAKEETIAILEKH 223
I+RPG A E T AIL++
Sbjct: 239 GIIRPGCALESTTAILQQK 257
>gi|402853994|ref|XP_003891671.1| PREDICTED: yrdC domain-containing protein, mitochondrial [Papio
anubis]
Length = 279
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 131/199 (65%), Gaps = 8/199 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 73 AVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAVCLGRVADVYRYC 132
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P GLL LLPGPVT+V+ R E L K LNP +G+R+PD F++ +A+ E
Sbjct: 133 RV-RVPEGLLKDLLPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHAFMQDLAQMFEG 189
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS++V++F +LW + + V DGG + P R GSTVVDL+ GKF
Sbjct: 190 PLALTSANLSSQASSLNVEEFRDLWPQLSLVIDGGQIGGGQSPECRLGSTVVDLSVPGKF 249
Query: 205 KILRPGSAKEETIAILEKH 223
I+RPG A E T AIL++
Sbjct: 250 GIIRPGCALESTTAILQQK 268
>gi|355557845|gb|EHH14625.1| hypothetical protein EGK_00582, partial [Macaca mulatta]
Length = 207
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 131/198 (66%), Gaps = 8/198 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G V+AVPTDTLYG AC A S A+ +Y +KGR PLA+C+G V+D+ R+
Sbjct: 1 AVAELRAGAVVAVPTDTLYGLACAASCSAALRAVYRLKGRSEAKPLAVCLGRVADVYRYC 60
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P GLL LLPGPVT+V+ R E N K LNP +G+R+PD F++ +A+ E
Sbjct: 61 RV-RVPEGLLKDLLPGPVTLVMERSEELN--KDLNPFTPLVGIRIPDHAFMQDLAQMFEG 117
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKF 204
LALTSANL+ Q SS++V++F +LW + + V DGG + P R GSTVVDL+ GKF
Sbjct: 118 PLALTSANLSSQASSLNVEEFRDLWPQLSLVIDGGQIGGGQSPECRLGSTVVDLSVPGKF 177
Query: 205 KILRPGSAKEETIAILEK 222
I+RPG A E T AIL++
Sbjct: 178 GIIRPGCALESTTAILQQ 195
>gi|156399845|ref|XP_001638711.1| predicted protein [Nematostella vectensis]
gi|156225834|gb|EDO46648.1| predicted protein [Nematostella vectensis]
Length = 224
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 127/198 (64%), Gaps = 12/198 (6%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF- 88
A+ +LK G VIA+PTDT+YG A S AV ++YEIKGR P+AI VG++ D+ R+
Sbjct: 23 AVASLKLGHVIALPTDTIYGIAALTQSCNAVQKLYEIKGRHQEKPVAIAVGNIEDVKRWG 82
Query: 89 --AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
V+D +L LLPGPVT+V R + L SLNPG IG+R+P+ +FVR +A+
Sbjct: 83 KVTVSD----DILTDLLPGPVTLVFER--TPELNPSLNPGTTLIGIRIPNHHFVRKLAKA 136
Query: 147 LESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL---PSGRAGSTVVDLTRLGK 203
+ALTSAN + SS+ V++F++LW V DGG + P R GSTV++L+ G+
Sbjct: 137 CAEPIALTSANQSSAMSSLKVEEFKSLWPHLDLVVDGGPVGDSPECRQGSTVINLSVPGQ 196
Query: 204 FKILRPGSAKEETIAILE 221
F I+R GSA ++T+ +LE
Sbjct: 197 FSIIREGSAYQQTLDVLE 214
>gi|195336176|ref|XP_002034718.1| GM19771 [Drosophila sechellia]
gi|194126688|gb|EDW48731.1| GM19771 [Drosophila sechellia]
Length = 325
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 129/207 (62%), Gaps = 7/207 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+A + A Q L G+VIA+PTDT+YG ACDA + A+ R+YEIKGR P+AICV ++S
Sbjct: 115 KAALQLARQCLLGGQVIALPTDTVYGLACDANNETAIQRLYEIKGRDEHKPVAICVHNIS 174
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRG-ESSNLEKSLNPGLESIGVRVPDSNFVR- 141
+ RF HL LL LLPGP+T+V+ R + SN + LNP IG+R+PD NF+R
Sbjct: 175 ALRRFGQAAHLSDELLTRLLPGPLTIVIERTVQLSN--RFLNPSTSKIGIRIPDFNFMRD 232
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDG---GVLPSGRAGSTVVDL 198
+ E LALTSAN + PSS+ V +F +LW + V+D G+ R STV+DL
Sbjct: 233 LCGVWQEQPLALTSANRSSAPSSLQVSEFRSLWPQLGAVFDAGRIGLTEERRLASTVIDL 292
Query: 199 TRLGKFKILRPGSAKEETIAILEKHSL 225
G F+I+R G A + T++++++ +
Sbjct: 293 ATPGYFEIVRAGVALKPTLSLMDEFGI 319
>gi|357631745|gb|EHJ79214.1| ischemia/reperfusion inducible protein [Danaus plexippus]
Length = 296
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 125/201 (62%), Gaps = 5/201 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A + L+ G+VIAVPTDT+YG AC A EA+ ++Y IKGR P+AICV + D+ +
Sbjct: 92 KAAEYLEKGEVIAVPTDTIYGLACSAKCPEAIKKLYTIKGRDSIKPVAICVNSILDVRHW 151
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
HL LL++LLPGPVTVVL + + + LNP IG+R+P++ F+ +
Sbjct: 152 GDASHLSDILLNNLLPGPVTVVLEKTKYLD-NPYLNPQTTKIGIRIPNNVFINNMTNVFN 210
Query: 149 SALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSG----RAGSTVVDLTRLGKF 204
+ALTSAN + +PS++ +++F++L+E V+DGG L G R GST+VDL+ G++
Sbjct: 211 KPVALTSANFSNEPSTLCIEEFKHLYEHLGAVFDGGTLSRGLNANRIGSTIVDLSVKGEY 270
Query: 205 KILRPGSAKEETIAILEKHSL 225
I+R G + E + L + L
Sbjct: 271 NIIRKGISYERIVEFLNSYGL 291
>gi|195154030|ref|XP_002017926.1| GL17434 [Drosophila persimilis]
gi|194113722|gb|EDW35765.1| GL17434 [Drosophila persimilis]
Length = 335
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 125/201 (62%), Gaps = 7/201 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A Q L G+VIA+PTDT+YG ACDA + A+ R+YEIKGR P+AICV ++ + R+
Sbjct: 127 ARQCLLGGQVIALPTDTVYGLACDANNEHAIQRMYEIKGRDEHKPVAICVNNIEALRRYG 186
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSR-GESSNLEKSLNPGLESIGVRVPDSNFVRVIAR-GL 147
HL LL LLPGP+T+V+ R E SN + LNP IG+R+PD F+R +
Sbjct: 187 QAAHLSDELLTRLLPGPLTIVIERTHELSN--RFLNPTTSKIGIRIPDFQFIRALCSVWH 244
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL---PSGRAGSTVVDLTRLGKF 204
E LALTSAN + PSS+ V +F +LW + V+D G + R STV+DL G +
Sbjct: 245 EQPLALTSANRSSAPSSLQVTEFHSLWPQLGAVFDAGQIGLTEERRLASTVIDLATPGYY 304
Query: 205 KILRPGSAKEETIAILEKHSL 225
+I+R G A ++T+ ++E++ +
Sbjct: 305 EIVRAGVALKQTLRLVEEYGI 325
>gi|198458321|ref|XP_001360991.2| GA17233 [Drosophila pseudoobscura pseudoobscura]
gi|198136301|gb|EAL25567.2| GA17233 [Drosophila pseudoobscura pseudoobscura]
Length = 335
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 125/201 (62%), Gaps = 7/201 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A Q L G+VIA+PTDT+YG ACDA + A+ R+YEIKGR P+AICV ++ + R+
Sbjct: 127 ARQCLLGGQVIALPTDTVYGLACDANNEHAIQRMYEIKGRDEHKPVAICVNNIEALRRYG 186
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRG-ESSNLEKSLNPGLESIGVRVPDSNFVRVIAR-GL 147
HL LL LLPGP+T+V+ R E SN + LNP IG+R+PD F+R +
Sbjct: 187 QAAHLSDELLTRLLPGPLTIVIERTPELSN--RFLNPTTSKIGIRIPDFQFIRALCSVWH 244
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL---PSGRAGSTVVDLTRLGKF 204
E LALTSAN + PSS+ V +F +LW + V+D G + R STV+DL G +
Sbjct: 245 EQPLALTSANRSSAPSSLQVTEFRSLWPQLGAVFDAGQIGLTEERRLASTVIDLATPGYY 304
Query: 205 KILRPGSAKEETIAILEKHSL 225
+I+R G A ++T+ ++E++ +
Sbjct: 305 EIVRAGVALKQTLRLVEEYGI 325
>gi|440908112|gb|ELR58170.1| YrdC domain-containing protein, mitochondrial, partial [Bos
grunniens mutus]
Length = 195
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 127/191 (66%), Gaps = 8/191 (4%)
Query: 41 AVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLD 100
AVPTDTLYG AC A SEA+ +Y +KGR T PLA+C+G V+D+ R+ +P GLL
Sbjct: 1 AVPTDTLYGLACSASCSEALGAVYRVKGRSETKPLAVCLGRVADVYRYCHV-RVPEGLLK 59
Query: 101 SLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTG 160
LLPGPVT+V+ R E N K LNP +G+R+PD F++ +A+ LALTSANL+
Sbjct: 60 DLLPGPVTLVMERSEELN--KDLNPFTPLVGIRIPDHAFMQDLAQMFGGPLALTSANLSS 117
Query: 161 QPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKFKILRPGSAKEE 215
Q SS++V++F++LW + + DGG + P R GSTVVDL+ GKF I+RPG A E
Sbjct: 118 QSSSLNVEEFQDLWPHLSLIIDGGPIGDGQSPECRLGSTVVDLSVPGKFGIIRPGCALES 177
Query: 216 TIAILEKHSLV 226
T AIL ++ L+
Sbjct: 178 TSAILREYGLL 188
>gi|194753758|ref|XP_001959177.1| GF12752 [Drosophila ananassae]
gi|190620475|gb|EDV35999.1| GF12752 [Drosophila ananassae]
Length = 342
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 131/222 (59%), Gaps = 6/222 (2%)
Query: 9 QVSVENKAGLVRPA-TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIK 67
Q +E K V P E A Q L G+VIA+PTDT+YG ACDA + +A+ R+YEIK
Sbjct: 116 QSQMEEKKTTVCPVGDETAIPLARQCLLNGEVIALPTDTVYGLACDANNEQAIQRLYEIK 175
Query: 68 GRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGL 127
GR P+AICV +++ + RF HL LL LLPGP+T+V+ R S + LNP
Sbjct: 176 GRDEHKPVAICVHNIAALRRFGQAAHLSDELLTRLLPGPLTIVIERT-SYLSNRFLNPTT 234
Query: 128 ESIGVRVPDSNFVR-VIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDG--- 183
IG+R+PD F+ + A + LALTSAN + PSS+ V +F++LW V+D
Sbjct: 235 SKIGIRIPDFQFMSDLCAVWQDQPLALTSANRSSAPSSLQVSEFQSLWPHLGAVFDAGRI 294
Query: 184 GVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSL 225
G+ R STV+DL G ++I+R G A + T+ ++E++ +
Sbjct: 295 GLTEERRLASTVIDLATPGYYEIVRAGVALKPTLMLMEEYGI 336
>gi|350407281|ref|XP_003488043.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Bombus impatiens]
Length = 268
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 126/200 (63%), Gaps = 8/200 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ ++IAVPTDT+YG AC S+ A+ ++YEIK R+ PL+ICV ++ D+ +
Sbjct: 66 AVALLQKNEIIAVPTDTIYGLACLVSSTSAIEKLYEIKEREVDKPLSICVSNLKDMQTWG 125
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ DH+P LL LLPGP T++L R + L +LNP +++G+RVP+ F+R +A +
Sbjct: 126 IVDHIPISLLSCLLPGPYTIILKRTPA--LNPALNPNHDTVGIRVPNHKFIRHVAE-VAG 182
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYD-----GGVLPSGRAGSTVVDLTRLGKF 204
LALTSAN++ +PS V +FENLW + ++ G + R GST++DLT G +
Sbjct: 183 PLALTSANISNEPSCVYASEFENLWNKLGGIFHQSKKLGKMHDCLRRGSTIIDLTEPGCY 242
Query: 205 KILRPGSAKEETIAILEKHS 224
KI+R G + +L++++
Sbjct: 243 KIIRHGIGAIYAVNMLKRYN 262
>gi|327284453|ref|XP_003226952.1| PREDICTED: hypothetical protein LOC100555097 [Anolis carolinensis]
Length = 499
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 121/191 (63%), Gaps = 8/191 (4%)
Query: 35 KTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHL 94
+ G ++A+PTDT+YG AC A S A+ +Y +KGR PLA+C+ D+ ++RF +
Sbjct: 91 RGGGLVALPTDTVYGVACLAEDSRALEALYRLKGRDPGKPLAVCLPDLDVLHRFCKV-QV 149
Query: 95 PHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALT 154
P GLL LLPGPVT+VL R E+ N LNP +GVR+P+ F R +AR + LALT
Sbjct: 150 PEGLLQDLLPGPVTLVLERSEALN--PDLNPFTPLVGVRIPNHWFARELARICAAPLALT 207
Query: 155 SANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKFKILRP 209
SAN + + S++ V +F+ LW + V DGG L P R GSTVVDL+ GKF+++RP
Sbjct: 208 SANPSHKGSTLDVTEFQELWPHLSLVVDGGPLGDTHSPESRLGSTVVDLSVPGKFRVIRP 267
Query: 210 GSAKEETIAIL 220
G A +T+ IL
Sbjct: 268 GCALSQTLDIL 278
>gi|28278078|gb|AAH45238.1| LOC398509 protein, partial [Xenopus laevis]
Length = 188
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/181 (47%), Positives = 118/181 (65%), Gaps = 8/181 (4%)
Query: 45 DTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLP 104
DT+YG AC A +S++++ IY +KGR T PLAICVG+V DI R+ + +P LL LLP
Sbjct: 1 DTIYGIACLAQNSQSISNIYNVKGRNGTKPLAICVGNVEDIYRYCRVN-VPDQLLRDLLP 59
Query: 105 GPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSS 164
GPVT+V+ R S L K LNP +GVR+PD F+R +A LALTSAN++ Q S+
Sbjct: 60 GPVTLVMER--SDRLNKELNPFTSLVGVRIPDHAFIRQLAEVCSEPLALTSANISSQEST 117
Query: 165 VSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKFKILRPGSAKEETIAI 219
++V++F +LW + + V DGG + P R GSTVVDL+ GKF ++R G A T+ I
Sbjct: 118 LTVEEFRDLWPKLSLVVDGGPIGEHSSPECRLGSTVVDLSVPGKFTVIRDGCALTHTVDI 177
Query: 220 L 220
L
Sbjct: 178 L 178
>gi|322799894|gb|EFZ21035.1| hypothetical protein SINV_05462 [Solenopsis invicta]
Length = 239
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 126/201 (62%), Gaps = 8/201 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + L+ GKVIA+PTDT+YG AC A + A+ R+YEIK R PLAIC+ +V ++ +
Sbjct: 36 AAEMLRQGKVIALPTDTVYGLACLATDTCAIQRLYEIKRRDEGKPLAICLSNVKEVGTWG 95
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ D +P +L+ LLPGP T+ L R + L ++LNPG++++G+RVPD+ F+R +A+ +
Sbjct: 96 ILDDIPANMLEQLLPGPYTICLRR--TPALNRALNPGVDTVGIRVPDNKFIRSVAQ-IAG 152
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGG-----VLPSGRAGSTVVDLTRLGKF 204
LALTSAN++ +PSS++ +F LW ++ + R GSTVVD+++ G F
Sbjct: 153 PLALTSANVSSEPSSLNPYEFRALWSEVDGIFHDSNNCRKQIDQRRVGSTVVDISKPGCF 212
Query: 205 KILRPGSAKEETIAILEKHSL 225
++R G I L K+ L
Sbjct: 213 TVVRHGINANLIIGKLRKYKL 233
>gi|346472809|gb|AEO36249.1| hypothetical protein [Amblyomma maculatum]
Length = 251
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 129/204 (63%), Gaps = 6/204 (2%)
Query: 27 AEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDIN 86
A+EA L+ G VIAVPTDT+YG A A S+AV R++++K R P+AICV DV+DI+
Sbjct: 47 AKEAASILRAGGVIAVPTDTIYGVAALAQHSDAVLRLFQLKRRDAGKPVAICVHDVADIS 106
Query: 87 RFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+A +P LL L PGPVT V R + L +LNP +GVRVPDS+F+R A+
Sbjct: 107 LWAEVS-IPETLLRQLFPGPVTAVFCR--TPRLNPALNPLTNLVGVRVPDSDFIRETAKR 163
Query: 147 LESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLP-SG--RAGSTVVDLTRLGK 203
LALTSAN++ + S+++VK+F++LW V+DGG L SG R GSTV+D + G
Sbjct: 164 CGGPLALTSANVSSEMSTLTVKEFQSLWPHLDAVFDGGDLSVSGFHREGSTVIDFSLPGC 223
Query: 204 FKILRPGSAKEETIAILEKHSLVE 227
F+ILR G + +L++ L E
Sbjct: 224 FRILREGCVPHQCRKLLQEFHLKE 247
>gi|346466673|gb|AEO33181.1| hypothetical protein [Amblyomma maculatum]
Length = 218
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 129/204 (63%), Gaps = 6/204 (2%)
Query: 27 AEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDIN 86
A+EA L+ G VIAVPTDT+YG A A S+AV R++++K R P+AICV DV+DI+
Sbjct: 14 AKEAASILRAGGVIAVPTDTIYGVAALAQHSDAVLRLFQLKRRDAGKPVAICVHDVADIS 73
Query: 87 RFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+A +P LL L PGPVT V R + L +LNP +GVRVPDS+F+R A+
Sbjct: 74 LWAEVS-IPETLLRQLFPGPVTAVFCR--TPRLNPALNPLTNLVGVRVPDSDFIRETAKR 130
Query: 147 LESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLP-SG--RAGSTVVDLTRLGK 203
LALTSAN++ + S+++VK+F++LW V+DGG L SG R GSTV+D + G
Sbjct: 131 CGGPLALTSANVSSEMSTLTVKEFQSLWPHLNAVFDGGDLSVSGFHREGSTVIDFSLPGC 190
Query: 204 FKILRPGSAKEETIAILEKHSLVE 227
F+ILR G + +L++ L E
Sbjct: 191 FRILREGCVPHQCRKLLQEFHLKE 214
>gi|410927444|ref|XP_003977156.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Takifugu rubripes]
Length = 234
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 124/198 (62%), Gaps = 5/198 (2%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 91
+ LK G V+A+PTDT+YG AC A +SEA+ +IY+IKGR PLAICVG + D+ +
Sbjct: 36 KCLKEGHVVALPTDTIYGLACLAQNSEAIRKIYDIKGRNQQKPLAICVGQIQDVYNYC-N 94
Query: 92 DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESAL 151
+ LL LLPGPVT+V R + N + LNP +GVR+P +F+R + + L
Sbjct: 95 VLVQKSLLHDLLPGPVTLVFERSDVLNTD--LNPFTSLVGVRIPQHDFMRRLCQMCGEPL 152
Query: 152 ALTSANLTGQPSSVSVKDFENLWERCA-CVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
ALTSAN++ S+V+V +F+ LW A V G V R GSTVVDL+ GK++I+R G
Sbjct: 153 ALTSANISSHTSTVAVHEFQELWPNLAVVVDGGPVGGQSRLGSTVVDLSVRGKYRIIRQG 212
Query: 211 SAKEETIAILE-KHSLVE 227
A TI +LE KH L++
Sbjct: 213 CALTSTIDVLEHKHGLLQ 230
>gi|340717268|ref|XP_003397107.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
isoform 1 [Bombus terrestris]
gi|340717270|ref|XP_003397108.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
isoform 2 [Bombus terrestris]
Length = 268
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 116/191 (60%), Gaps = 18/191 (9%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ ++IAVPTDT+YG AC S+ A+ ++YEIK R PL+ICV + D+ +
Sbjct: 66 AVALLQKNEIIAVPTDTIYGLACLVSSTSAIEKLYEIKKRDVDKPLSICVSNFKDVQTWG 125
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
V DH+P LL LLPGP T++L R + L +LNP +++G+RVP F+R + +
Sbjct: 126 VVDHVPISLLSWLLPGPYTIILKRTPA--LNPALNPNHDTVGIRVPHHKFIRRVTE-IAG 182
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSG----------RAGSTVVDLT 199
LALTSAN++ +PS + +FENLW + GG+ S R GST++DLT
Sbjct: 183 PLALTSANISNEPSCICASEFENLWNKL-----GGIFHSSKKFDKASNYFRQGSTIIDLT 237
Query: 200 RLGKFKILRPG 210
G++KI+R G
Sbjct: 238 EPGRYKIIRYG 248
>gi|196005123|ref|XP_002112428.1| hypothetical protein TRIADDRAFT_25776 [Trichoplax adhaerens]
gi|190584469|gb|EDV24538.1| hypothetical protein TRIADDRAFT_25776, partial [Trichoplax
adhaerens]
Length = 219
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 131/213 (61%), Gaps = 20/213 (9%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A ++L+ G +IA+PTDT+YG A A AV+++Y KGR+ +P++ICVGDV+D+ R
Sbjct: 5 AKESLQAGNIIALPTDTIYGIAALAQLPNAVDKLYNTKGRRRDNPISICVGDVADLKRQV 64
Query: 90 VTDHLP--------HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
HL LL LLPGPVT+V R L LNP +G+R+PD F+R
Sbjct: 65 ---HLRPWCSVCVCDALLYDLLPGPVTLVFQRHPV--LNPKLNPNTNLVGIRIPDFPFIR 119
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL------PSGRAGSTV 195
+AR + LALTSAN + SS+++ +F++LW++ ++DGG + S R GSTV
Sbjct: 120 EVARACDQPLALTSANKSLALSSLAIDEFQSLWDQLDVIFDGGRISQSGDDQSSRLGSTV 179
Query: 196 VDLTRLGKFKILRPGSAKEETIAIL-EKHSLVE 227
++L+ G FKI+R GSA E T+ +L K+ L+E
Sbjct: 180 INLSVEGYFKIIRKGSAFENTVKLLVNKYGLIE 212
>gi|198433752|ref|XP_002131934.1| PREDICTED: similar to ischemia/reperfusion inducible protein
isoform 2 [Ciona intestinalis]
gi|198433756|ref|XP_002131919.1| PREDICTED: similar to ischemia/reperfusion inducible protein
isoform 1 [Ciona intestinalis]
Length = 293
Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 129/229 (56%), Gaps = 37/229 (16%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI-- 85
E ++ L G ++A+PTDTLYG AC A S+EAV ++YEIK R P+AICVGD+ +
Sbjct: 58 ESCVRILHRGGIVALPTDTLYGVACLAQSTEAVEKLYEIKARNPLKPVAICVGDLYKVCQ 117
Query: 86 -NRF------------AVTDHLP----------HGLLDSLLPGPVTVVLSRGESSNLEKS 122
RF + D L +GLL+ LLPGPVT+V R S +L +
Sbjct: 118 WTRFPQGLIQSVSKTLGLEDQLDCQRPSSPGVLYGLLEDLLPGPVTIVTER--SPSLNNT 175
Query: 123 LNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYD 182
LNP +G+RVPD F++ + L LALTSAN++G+ SS+ ++DF +LW + V D
Sbjct: 176 LNPKTSLVGIRVPDHKFIKDLTNRLREPLALTSANVSGEESSLRIEDFRSLWPKLDAVVD 235
Query: 183 GG---------VLPSGRAGSTVVDLTRLG-KFKILRPGSAKEETIAILE 221
G L + GSTVV + G FKILRPG A E T+++L+
Sbjct: 236 DGEVGTRYVNKTLQYAKEGSTVVQILNDGVSFKILRPGCAYENTVSVLK 284
>gi|427787315|gb|JAA59109.1| Putative translation factor [Rhipicephalus pulchellus]
Length = 250
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 122/187 (65%), Gaps = 6/187 (3%)
Query: 27 AEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDIN 86
A+EA LK G VIAVPTDT+YG A A SE+V R++++K R P+AICV DV+DI+
Sbjct: 46 AKEAASILKAGGVIAVPTDTIYGVAALAQHSESVARLFQLKRRDAGKPVAICVHDVADIS 105
Query: 87 RFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
++A +P LL L PGPVT V R + L +LNP +GVRVPDS+F+R +
Sbjct: 106 QWAEVS-IPENLLRQLFPGPVTAVFCR--TPRLNPALNPFTNLVGVRVPDSDFIRQTTKL 162
Query: 147 LESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLP-SG--RAGSTVVDLTRLGK 203
LALTSAN++ + S++++++F++LW V+DGG L SG R GSTV+D + G
Sbjct: 163 CGGPLALTSANVSSEMSTLTIQEFQSLWPFLDAVFDGGDLSVSGFHREGSTVIDFSLPGC 222
Query: 204 FKILRPG 210
F+ILR G
Sbjct: 223 FRILREG 229
>gi|56755217|gb|AAW25788.1| SJCHGC02454 protein [Schistosoma japonicum]
Length = 268
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 123/215 (57%), Gaps = 32/215 (14%)
Query: 39 VIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGL 98
VIA+PTDT+YG AC ++E++ RI IKGR T P+AIC+ VS I+ + T ++P GL
Sbjct: 44 VIALPTDTVYGLACSVYNTESIERIRHIKGRSETKPMAICLDQVSHISHWCDTKNIPTGL 103
Query: 99 LDSLLPGPVTVVLSRGE---SSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA----- 150
L LLPGPVTV+L R L LNPG +G+R+PDS F+R + L
Sbjct: 104 LSDLLPGPVTVLLPRFPDKLQDPLNCHLNPGERRVGIRIPDSGFIRKLISALHEQTKLSS 163
Query: 151 -------------LALTSANLTGQPSSVSVKDFENLWERCACVYDGG----VLPS----- 188
L LTSANL+GQPS++ +++F +W + +GG LPS
Sbjct: 164 TSGNDEYSGGGHPLVLTSANLSGQPSAIQIEEFSEIWPSIDLIVNGGPIQPSLPSVNLDY 223
Query: 189 GRAGSTVVDLTRLGK--FKILRPGSAKEETIAILE 221
R+GST++DL K + ++R GSA + T+A+LE
Sbjct: 224 NRSGSTIIDLCDCDKSIYYVVRSGSAYDATVAVLE 258
>gi|442758887|gb|JAA71602.1| Putative yrdc domain protein [Ixodes ricinus]
Length = 246
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 126/204 (61%), Gaps = 6/204 (2%)
Query: 27 AEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDIN 86
A+ A L++G ++A+PTDT+YG A A +SE+V ++Y +K R P+AICV D +I+
Sbjct: 45 AQAAADILRSGGIVALPTDTIYGVAALAQNSESVEKLYRLKRRDAGKPIAICVHDADEIS 104
Query: 87 RFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
R+A +P LL L PG VT V R + L +LNP +GVRVP+SNF+R + R
Sbjct: 105 RWAQVS-IPKKLLHHLFPGAVTAVFQR--TRELNPNLNPLTPLVGVRVPNSNFIRQVTRC 161
Query: 147 LESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL---PSGRAGSTVVDLTRLGK 203
LALTSAN++ + S++S+++F+ LW V+DGG L R GSTVV+ + G
Sbjct: 162 CGEPLALTSANVSSEMSTLSIQEFQALWPHLDAVFDGGNLGLDGFNREGSTVVNFSIPGP 221
Query: 204 FKILRPGSAKEETIAILEKHSLVE 227
F+I+R G A +ET +L L+E
Sbjct: 222 FEIIRRGCAFQETKELLGGFQLLE 245
>gi|358338031|dbj|GAA56369.1| YrdC domain-containing protein mitochondrial [Clonorchis sinensis]
Length = 361
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 121/208 (58%), Gaps = 18/208 (8%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 91
Q L++G V+AVPTDT+YG +C +A+ RI+++KGR P+AIC+ +V I + T
Sbjct: 143 QLLRSGAVVAVPTDTIYGVSCSVHCEQAIKRIHQLKGRPTNKPMAICLDEVDSIPYWCDT 202
Query: 92 DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA------- 144
LP GLL++LLPGPVT++L + L LNP +GVRV D FVR +
Sbjct: 203 TGLPQGLLNALLPGPVTLLLPKHSRDPLNVHLNPDAHLVGVRVTDHGFVRDLCAALGRLE 262
Query: 145 ----RGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPS-----GRAGSTV 195
R + L LTSANL+G S++ +++F +W + DGG + + R+GST+
Sbjct: 263 TNGFRSIGHPLVLTSANLSGDASALRIEEFSAIWPELDLIIDGGPISTCAKELARSGSTI 322
Query: 196 VDLTRLGK--FKILRPGSAKEETIAILE 221
VDL+ K + I+R GSA T+ ILE
Sbjct: 323 VDLSSASKGLYHIVRNGSALNSTVQILE 350
>gi|167525667|ref|XP_001747168.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774463|gb|EDQ88092.1| predicted protein [Monosiga brevicollis MX1]
Length = 300
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 124/206 (60%), Gaps = 9/206 (4%)
Query: 20 RPATEAH---AEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLA 76
RPA A + + AL+ V+A+PTDT+YG A A S+ AV ++Y+IK R P+A
Sbjct: 74 RPAVNAALIVRDHVVPALQREAVVALPTDTIYGIAAVAQSATAVQKLYDIKERDPAKPIA 133
Query: 77 ICVGDVSDINRFA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVP 135
ICV V+D+ +A VT +P +L LLPG VTVV R + L LNP + IG+RV
Sbjct: 134 ICVPKVADVYTYAHVT--VPDDVLHQLLPGAVTVVFKRKPA--LNPLLNPDTDLIGIRVT 189
Query: 136 DSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSG-RAGST 194
+ + + I GL++ +ALTSAN G S V +FE+LW CV DGG L +G R GST
Sbjct: 190 NHSLTQAIVAGLQAPIALTSANKAGAASCVQADEFEHLWPALGCVVDGGRLGTGSRLGST 249
Query: 195 VVDLTRLGKFKILRPGSAKEETIAIL 220
VVDL++ F +LR G A++ + +L
Sbjct: 250 VVDLSKPQTFALLRDGDAEQHVVDVL 275
>gi|391338994|ref|XP_003743838.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
[Metaseiulus occidentalis]
Length = 222
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 120/192 (62%), Gaps = 8/192 (4%)
Query: 39 VIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGL 98
V+AVPTDT+YG A A S AV R+Y IKGR P+AICVG ++DI+++A + L
Sbjct: 29 VLAVPTDTVYGVAGLAQSVRAVRRLYSIKGRDPLKPVAICVGRIADIHKWAEV-TVSGNL 87
Query: 99 LDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANL 158
L+ LLPG VT++ R S+ L LNP + + +RVP+S ++R + + +++ LALTSAN+
Sbjct: 88 LECLLPGAVTLIFKR--SAQLNPELNPDTDLVAIRVPNSAYIRALCQSVDAPLALTSANV 145
Query: 159 TGQPSSVSVKDFENLWERCACVYDGGVLPSG-----RAGSTVVDLTRLGKFKILRPGSAK 213
+ + S++ V +F +LW V DGG L G R GST++DL+ G F ++R G
Sbjct: 146 SSERSTLKVDEFRDLWPSLDLVLDGGTLCQGSEERQRQGSTIIDLSEPGTFNVVRNGCCL 205
Query: 214 EETIAILEKHSL 225
E T+A L K L
Sbjct: 206 ESTMATLLKSGL 217
>gi|449019426|dbj|BAM82828.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 258
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 132/235 (56%), Gaps = 29/235 (12%)
Query: 9 QVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKG 68
+++ EN LVR A + L+ G++IA+PTDT+YG A A +S + +Y+ K
Sbjct: 19 RITPENFEKLVRFAA--------RLLRVGEIIALPTDTVYGLAAAARNSHGIELLYQTKQ 70
Query: 69 RKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESS---NLE----- 120
R PLAI V V D++ + T+HLP GLL+++LPGP+T++L + E +L+
Sbjct: 71 RDLRKPLAIAVPSVEDVSVYLHTEHLPPGLLEAILPGPLTLLLRQREDYVGIDLQDVRID 130
Query: 121 --------KSLNPGLES-----IGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSV 167
K L P L +GVRVPD++F ++R L LALTSAN++G+ SV
Sbjct: 131 QYRGWERAKRLAPNLNLRRDGLLGVRVPDASFACAVSRELGDPLALTSANVSGRGDCGSV 190
Query: 168 KDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEK 222
+F LW CA V+DGG +P STVVDL+ G F+I R G + + ILE
Sbjct: 191 DEFRALWSACAAVFDGGAMPKPVMPSTVVDLSVPGTFRITRAGWMATDLVRILEN 245
>gi|256072137|ref|XP_002572393.1| hypothetical protein [Schistosoma mansoni]
gi|353233472|emb|CCD80827.1| hypothetical protein Smp_127100 [Schistosoma mansoni]
Length = 287
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 127/229 (55%), Gaps = 47/229 (20%)
Query: 39 VIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGL 98
V+A+PTDT+YG AC ++EA+ RI IKGR T P+AIC+ VS I+ + T ++P GL
Sbjct: 44 VVALPTDTIYGLACSVFNTEAIERIRRIKGRSETKPMAICLDQVSHISHWCDTKNIPTGL 103
Query: 99 LDSLLPGPVTVVLSRGESSNLE-----KSLNPGLESIGVRVPDSNFVR------------ 141
L LLPGPVTV+L R S L+ + LN G + +G+R+PDS F+R
Sbjct: 104 LSDLLPGPVTVLLPRF-SDRLQDPLSTRLLNLGDKRVGIRIPDSGFIRKLISALNEQTRS 162
Query: 142 --VIARGLESA----------------LALTSANLTGQPSSVSVKDFENLWERCACVYDG 183
+I +E + L LTSANL+GQPS++ +++F +W + +G
Sbjct: 163 SSIIGNNVEHSSGCDERDSISISGGHPLVLTSANLSGQPSAIQIEEFSEIWSSIDLIING 222
Query: 184 GVLPS---------GRAGSTVVDLTRLGK--FKILRPGSAKEETIAILE 221
G + S RAGST++DL K + ++R GSA T+AILE
Sbjct: 223 GPIQSDIFSGNSDCSRAGSTIIDLCNCDKSVYSVVRNGSAYNATVAILE 271
>gi|380023136|ref|XP_003695383.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like [Apis
florea]
Length = 268
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 118/186 (63%), Gaps = 8/186 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ ++IA+PTDT+YG A S+ ++ +IYEIK R PL+I + +V+DI ++A
Sbjct: 67 AVTLLQQNEIIAIPTDTIYGLAGIVSSTSSIEKIYEIKKRDKDKPLSISISNVNDIKKWA 126
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ DHLP LL ++PGP+T++L R + L +LNP +++G+R+P F++ I+ +
Sbjct: 127 IVDHLPQNLLPLIIPGPITIILKRTPA--LNPALNPNHDTVGIRIPCFKFLQYIS-DIVG 183
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACV-YD----GGVLPSGRAGSTVVDLTRLGKF 204
LALTSANL+ + S + +F+NLW + YD G R GST+VDL++ G +
Sbjct: 184 PLALTSANLSNEASCLYASEFQNLWPMLGGIFYDSTKFGKSSTKLRKGSTIVDLSKPGYY 243
Query: 205 KILRPG 210
+I+R G
Sbjct: 244 EIVRAG 249
>gi|241557718|ref|XP_002400036.1| YrdC domain-containing protein [Ixodes scapularis]
gi|215499737|gb|EEC09231.1| YrdC domain-containing protein [Ixodes scapularis]
Length = 208
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 118/196 (60%), Gaps = 6/196 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A L+ G ++A+PTDT+YG A A +SE+V ++Y +K R P+AICV + +I+R
Sbjct: 1 QAAADILRNGGIVALPTDTIYGVAALAQNSESVEKLYRLKRRDAGKPIAICVHNADEISR 60
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+A +P LL L PG VT V R + L LNP +GVRVP+S+F+R + R
Sbjct: 61 WAQVS-IPEKLLHHLFPGAVTAVFQR--TRELNPKLNPLTPLVGVRVPNSDFIRQVTRCC 117
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPS---GRAGSTVVDLTRLGKF 204
LALTSAN++ + S++S+++F+ LW V+DGG L R GSTV++ + G F
Sbjct: 118 GEPLALTSANVSSEMSTLSIQEFQALWPHLDAVFDGGNLGYNGLNREGSTVINFSIPGHF 177
Query: 205 KILRPGSAKEETIAIL 220
+I+R G + AIL
Sbjct: 178 EIIRKGWWVSKFDAIL 193
>gi|328777852|ref|XP_001120082.2| PREDICTED: yrdC domain-containing protein, mitochondrial-like [Apis
mellifera]
Length = 270
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 115/188 (61%), Gaps = 10/188 (5%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
AI L+ ++IA+PTDT+YG A S+ ++ ++YEIK R PL+I V +++DI ++
Sbjct: 67 AITLLQQNEIIAIPTDTIYGLAGIVSSTSSIEKLYEIKKRDKDKPLSISVNNINDIKKWG 126
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ DHLP LL +LPGP+T+++ R + L +LNP +++G+R+P F+ I+ +
Sbjct: 127 IVDHLPQDLLSLILPGPITIIVKRTPA--LNPALNPNHDTVGIRIPSFKFISYIS-AITG 183
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACV-YDGGVL------PSGRAGSTVVDLTRLG 202
LALTSANL+ + S + +F+NLW + YD R GST+VDL++ G
Sbjct: 184 PLALTSANLSNEKSCLYASEFQNLWPMLGGIFYDSNNFGKSKSKSKSRKGSTIVDLSKPG 243
Query: 203 KFKILRPG 210
+KI+R G
Sbjct: 244 YYKIVRAG 251
>gi|355729581|gb|AES09915.1| yrdC domain containing [Mustela putorius furo]
Length = 160
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/154 (48%), Positives = 102/154 (66%), Gaps = 8/154 (5%)
Query: 74 PLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVR 133
PLA+C+G V+D+ R+ +P GLL LLPGPVT+VL R E N K LNP +G+R
Sbjct: 2 PLAVCLGRVADVYRYCHV-RVPEGLLKDLLPGPVTLVLERSEELN--KDLNPFTPLVGIR 58
Query: 134 VPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PS 188
+PD F++ + + LALTSANL+ Q SS++V++F++LW + + V DGG + P
Sbjct: 59 IPDHAFIQDLVQVFGGPLALTSANLSSQASSLNVEEFQDLWPQLSLVIDGGPIGNGQSPE 118
Query: 189 GRAGSTVVDLTRLGKFKILRPGSAKEETIAILEK 222
R GSTVVDL+ GKF I+RPG A E T AIL++
Sbjct: 119 YRLGSTVVDLSVPGKFGIIRPGCALESTTAILQQ 152
>gi|406025170|ref|YP_006705471.1| YrdC domain-containing protein [Cardinium endosymbiont cEper1 of
Encarsia pergandiella]
gi|404432769|emb|CCM10051.1| YrdC domain-containing protein, mitochondrial [Cardinium
endosymbiont cEper1 of Encarsia pergandiella]
Length = 222
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 125/200 (62%), Gaps = 8/200 (4%)
Query: 27 AEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDIN 86
A+ A L G +IA+PTDT+YG AC A + +A+ R+++IK R + +P+A+CVG + +I
Sbjct: 25 AQYAATLLHKGGIIALPTDTVYGLACLAQNKQALKRLFQIKERANDNPIALCVGTIQEIA 84
Query: 87 RFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
++ + +L +LLPGPVT++ S + + N L +G+R+P+ F+ +A+
Sbjct: 85 KYGKVNLKIIPILGNLLPGPVTLLFEAWPSIDQDGIANSHL--VGIRMPNHPFIMQVAQL 142
Query: 147 LESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPS---GRAGSTVVDLTRLGK 203
A+ALTSAN + +PS ++V++F+ LW V+DGG L + R GST++DL+
Sbjct: 143 CNGAIALTSANKSKEPSCLNVQEFKPLWCDLDAVFDGGRLGTIDPMRLGSTILDLSIKAS 202
Query: 204 FKILRPGSAK---EETIAIL 220
FKI+R G A ++T++IL
Sbjct: 203 FKIIRNGCALNDVKKTLSIL 222
>gi|324522067|gb|ADY47983.1| YrdC domain-containing protein [Ascaris suum]
Length = 208
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 123/200 (61%), Gaps = 13/200 (6%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E A+ L++G VIA+PTDT+YG + +++ +++++K R P A+ + DV+
Sbjct: 13 EVALSRAVAVLESGGVIALPTDTIYGLSTTLGNAD---KLFKLKFRSRMKPFALFLSDVT 69
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+I+++A+ H + LLPGPVT+V +R SS L N G +IG+R+PD +FV +
Sbjct: 70 EISKWAIPTIGIH-TMRRLLPGPVTLVFNR--SSRLPAEFNEGHRTIGIRIPDHSFVHAL 126
Query: 144 ARGL-ESALALTSANLTGQPSS-VSVKDFENLWERCACVYDGGVL--PSG---RAGSTVV 196
++ L ++ LA TSANL+G + VSV+DFE+LW + DG VL P+G R GSTVV
Sbjct: 127 SKRLGDTPLAQTSANLSGAAENPVSVEDFEDLWPGVDLIIDGDVLKDPTGKVSRRGSTVV 186
Query: 197 DLTRLGKFKILRPGSAKEET 216
+L G + I+R G A+ T
Sbjct: 187 NLCIPGTYSIIRDGCARSST 206
>gi|324523357|gb|ADY48235.1| YrdC domain-containing protein [Ascaris suum]
Length = 226
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 123/200 (61%), Gaps = 13/200 (6%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E A+ L++G VIA+PTDT+YG + +++ +++++K R P A+ + DV+
Sbjct: 13 EVALSRAVAVLESGGVIALPTDTIYGLSTTLGNAD---KLFKLKFRSRMKPFALFLSDVT 69
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+I+++A+ H + LLPGPVT+V +R SS L N G +IG+R+PD +FV +
Sbjct: 70 EISKWAIPTIGIH-TMRRLLPGPVTLVFNR--SSRLPAEFNEGHRTIGIRIPDHSFVHAL 126
Query: 144 ARGL-ESALALTSANLTGQPSS-VSVKDFENLWERCACVYDGGVL--PSG---RAGSTVV 196
++ L ++ LA TSANL+G + VSV+DFE+LW + DG VL P+G R GSTVV
Sbjct: 127 SKRLGDTPLAQTSANLSGAAENPVSVEDFEDLWPGVDLIIDGDVLKDPTGKVSRRGSTVV 186
Query: 197 DLTRLGKFKILRPGSAKEET 216
+L G + I+R G A+ T
Sbjct: 187 NLCIPGTYSIIRDGCARSST 206
>gi|395526590|ref|XP_003765443.1| PREDICTED: yrdC domain-containing protein, mitochondrial
[Sarcophilus harrisii]
Length = 369
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 98/146 (67%), Gaps = 10/146 (6%)
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
+P LL+ LLPGPVT+V+ R S L K LNP +G+R+PD F+R + + LAL
Sbjct: 226 VPRELLEDLLPGPVTLVMER--SGELNKDLNPFTPLVGIRIPDHPFMRDLVQKFSGPLAL 283
Query: 154 TSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKFKILR 208
TSAN++ QPSS++VK+F++LW + V DGG + P R GSTVVDL+ GK++I+R
Sbjct: 284 TSANISSQPSSLNVKEFQDLWPHLSLVIDGGPIGDVKSPECRLGSTVVDLSVPGKYRIIR 343
Query: 209 PGSAKEETIAILE-KHSLV--EEPAA 231
PG A +T AIL+ K+SLV EEP +
Sbjct: 344 PGCALTQTAAILQKKYSLVPSEEPCS 369
>gi|119627723|gb|EAX07318.1| yrdC domain containing (E. coli), isoform CRA_b [Homo sapiens]
Length = 239
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 91/135 (67%), Gaps = 7/135 (5%)
Query: 93 HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
+P GLL LLPGPVT+V+ R E L K LNP +G+R+PD F++ +A+ E LA
Sbjct: 95 RVPEGLLKDLLPGPVTLVMERSE--ELNKDLNPFTPLVGIRIPDHAFMQDLAQMFEGPLA 152
Query: 153 LTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKFKIL 207
LTSANL+ Q SS++V++F++LW + + V DGG + P R GSTVVDL+ GKF I+
Sbjct: 153 LTSANLSSQASSLNVEEFQDLWPQLSLVIDGGQIGDGQSPECRLGSTVVDLSVPGKFGII 212
Query: 208 RPGSAKEETIAILEK 222
RPG A E T AIL++
Sbjct: 213 RPGCALESTTAILQQ 227
>gi|312075017|ref|XP_003140229.1| yrdC domain-containing protein [Loa loa]
gi|307764605|gb|EFO23839.1| yrdC domain-containing protein [Loa loa]
Length = 232
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 117/195 (60%), Gaps = 13/195 (6%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+Q ++G ++A+PTDTLYG +S+ ++Y++K R H PL + V +V D+ R+
Sbjct: 25 RCLQIFESGGIVALPTDTLYGVVTTLSNSD---KLYKLKRRNHLKPLGLFVSNVRDVQRW 81
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
+ + L +LLPGPVT++ R S+ L + NP ++G+R+PD +FVR + L+
Sbjct: 82 C-RQTIDNSQLRTLLPGPVTLIFER--STFLPRIFNPEHGTVGIRIPDHDFVRSLMTRLD 138
Query: 149 SA-LALTSANLT-GQPSSVSVKDFENLWERCACVYDGGVL--PSGRA---GSTVVDLTRL 201
LA TSAN++ Q + + ++DF++LW + DGGV+ P G+ GSTVV+L+
Sbjct: 139 DVPLAQTSANISNNQNNPICIEDFKDLWSELDLIIDGGVILRPDGKVNHEGSTVVNLSIP 198
Query: 202 GKFKILRPGSAKEET 216
G + I+R G A+ T
Sbjct: 199 GTYSIIRDGCARTAT 213
>gi|449273138|gb|EMC82746.1| YrdC domain-containing protein, mitochondrial, partial [Columba
livia]
Length = 152
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 93/144 (64%), Gaps = 8/144 (5%)
Query: 93 HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
++P LL LLPGPVT+VL R E N K LNP +GVR+P+ F+R +AR LA
Sbjct: 6 NVPDELLRDLLPGPVTLVLKRSEELN--KDLNPFTSLVGVRIPNHPFIRELARACPGPLA 63
Query: 153 LTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKFKIL 207
LTSAN++ Q S+++V +F+ LW + + + DGG + P R GSTVVDL+ GKF I+
Sbjct: 64 LTSANISCQASTLTVSEFQELWPQLSLIIDGGPIGDIQSPECRLGSTVVDLSVSGKFTII 123
Query: 208 RPGSAKEETIAIL-EKHSLVEEPA 230
RPG A T+ IL +K+ L+ EPA
Sbjct: 124 RPGCALASTVEILRQKYGLIPEPA 147
>gi|410966954|ref|XP_003989989.1| PREDICTED: yrdC domain-containing protein, mitochondrial [Felis
catus]
Length = 169
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 90/135 (66%), Gaps = 7/135 (5%)
Query: 93 HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
+P GLL LLPGPVT+VL R E L K LNP +G+R+PD F++ +A+ LA
Sbjct: 25 RVPEGLLKDLLPGPVTLVLERSE--ELNKDLNPFTRLVGIRIPDHAFIQDLAQVFGGPLA 82
Query: 153 LTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSG-----RAGSTVVDLTRLGKFKIL 207
LTSANL+ Q SS++V++F++LW + + + DGG + G R GSTVVDL+ GKF I+
Sbjct: 83 LTSANLSSQASSLNVEEFQDLWPQLSLIIDGGPIGDGQSSEYRLGSTVVDLSVPGKFGII 142
Query: 208 RPGSAKEETIAILEK 222
RPG A E T AIL++
Sbjct: 143 RPGCALERTTAILQQ 157
>gi|170291088|ref|YP_001737904.1| Sua5/YciO/YrdC/YwlC family protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170175168|gb|ACB08221.1| Sua5/YciO/YrdC/YwlC family protein [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 209
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 102/182 (56%), Gaps = 6/182 (3%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+R E+ +E + AL+ GK+I PTDT+YG DA + +AV R+YE+KGR L I
Sbjct: 6 LREGGESTIDEVVDALRKGKLIIYPTDTVYGLGADAENIDAVRRVYEVKGRPEEKRLTIA 65
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V D+ R+AV D + L++ LPG VT +L + +S + +NP E+IG+R+P+
Sbjct: 66 VSDIDMAERYAVVDEISRRLMEKFLPGKVTFILKK--TSRVPDIVNP--EAIGIRIPNIP 121
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDL 198
+ I R A+ TSAN +G P + ++ E + D G LP R ST+VDL
Sbjct: 122 IILRIIREFGGAITATSANKSGSPPKLDPEEAAMEIE-ADLLLDYGRLPPSRP-STIVDL 179
Query: 199 TR 200
TR
Sbjct: 180 TR 181
>gi|159184438|ref|NP_353749.2| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|159139751|gb|AAK86534.2| conserved hypothetical protein [Agrobacterium fabrum str. C58]
Length = 325
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 108/199 (54%), Gaps = 7/199 (3%)
Query: 24 EAHAEEAIQA----LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICV 79
E E A+QA L G+ IA+PT+T+YG A DA + A+ RIYE KGR +PL +
Sbjct: 8 ETERETALQASVAELADGRPIALPTETVYGLAADATNPAAITRIYETKGRPQFNPLICHM 67
Query: 80 GDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
D++ R+AV D + L ++ PGP+T+VL S++ GL+++G+RVP F
Sbjct: 68 ADIAMAERYAVFDPISRKLAEAFWPGPLTLVLPLKPESDIHSLATAGLDTVGIRVP-QGF 126
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDL 198
+ R LA SAN +G+ S S E +L ++ V DGG G ST+V +
Sbjct: 127 ASDLIRRFGKPLAAPSANSSGKISPTSAAHVEADLGQKINLVLDGGAAAVG-VESTIVKV 185
Query: 199 TRLGKFKILRPGSAKEETI 217
+ G+ ++LRPG E I
Sbjct: 186 EQDGRVRLLRPGGIVTEEI 204
>gi|335032674|ref|ZP_08526049.1| hypothetical protein AGRO_0017 [Agrobacterium sp. ATCC 31749]
gi|333795849|gb|EGL67171.1| hypothetical protein AGRO_0017 [Agrobacterium sp. ATCC 31749]
Length = 333
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 7/199 (3%)
Query: 24 EAHAEEAIQA----LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICV 79
E E A+QA L G+ IA+PT+T+YG A DA + A+ RIYE KGR +PL +
Sbjct: 16 ETERETALQASVAELADGRPIALPTETVYGLAADATNPAAITRIYETKGRPQFNPLICHM 75
Query: 80 GDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
D++ R+AV D + L ++ PGP+T+VL S++ GL+++G+RVP F
Sbjct: 76 ADIAMAERYAVFDPISRKLAEAFWPGPLTLVLPLKPESDIHSLATAGLDTVGIRVP-QGF 134
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDL 198
+ R LA SAN +G+ S S E +L ++ + DGG G ST+V +
Sbjct: 135 ASDLIRRFGKPLAAPSANSSGKISPTSAAHVEADLGQKINLILDGGAAAVG-VESTIVKV 193
Query: 199 TRLGKFKILRPGSAKEETI 217
+ G+ ++LRPG E I
Sbjct: 194 EQDGRVRLLRPGGIVTEEI 212
>gi|444706893|gb|ELW48210.1| Metal regulatory transcription factor 1 [Tupaia chinensis]
Length = 900
Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats.
Identities = 67/142 (47%), Positives = 92/142 (64%), Gaps = 8/142 (5%)
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
+P GLL LLPGPVT+V+ R E L + LNP +G+R+PD F++ +A+ LAL
Sbjct: 758 VPEGLLKDLLPGPVTLVMERTEE--LNQDLNPFTPLVGIRIPDHAFMQDLAQMFGGPLAL 815
Query: 154 TSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKFKILR 208
TSANL+ Q SS++V++F +LW + + V DGG + P R GSTVVDL+ GKF I+R
Sbjct: 816 TSANLSSQASSLNVEEFRDLWPQLSLVIDGGPIGDSQNPVCRLGSTVVDLSVPGKFGIIR 875
Query: 209 PGSAKEETIAIL-EKHSLVEEP 229
G A E T AIL +K+ L+ P
Sbjct: 876 AGCALENTTAILQQKYGLLPSP 897
>gi|325292109|ref|YP_004277973.1| hypothetical protein AGROH133_04322 [Agrobacterium sp. H13-3]
gi|325059962|gb|ADY63653.1| hypothetical protein AGROH133_04322 [Agrobacterium sp. H13-3]
Length = 325
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 3/195 (1%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E + A++ L G+ IA+PT+T+YG A DA A+ RIYE KGR +PL + D++
Sbjct: 12 ETALQAAVEELSRGQPIALPTETVYGLAADATDPAAITRIYETKGRPQFNPLICHMADIA 71
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
R+AV D + L ++ PGP+T+VL +S + GL+++G+RVP F +
Sbjct: 72 MAERYAVFDPVSRRLAEAFWPGPLTLVLPLKPASGIHSLATAGLDTVGIRVP-QGFAGDL 130
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
R + LA SAN +G+ S S E +L R + DGG G ST+V + G
Sbjct: 131 IRRFDKPLAAPSANSSGKISPTSAAHVEADLGNRINLILDGGAASVG-VESTIVKVEDDG 189
Query: 203 KFKILRPGSAKEETI 217
+ ++LRPG E I
Sbjct: 190 RVRLLRPGGIVTEEI 204
>gi|355745164|gb|EHH49789.1| hypothetical protein EGM_00504, partial [Macaca fascicularis]
Length = 150
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 90/135 (66%), Gaps = 7/135 (5%)
Query: 93 HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
+P GLL LLPGPVT+V+ R E N K LNP +G+R+PD F++ +A+ E LA
Sbjct: 6 RVPEGLLKDLLPGPVTLVMERSEELN--KDLNPFTPLVGIRIPDHAFMQDLAQMFEGPLA 63
Query: 153 LTSANLTGQPSSVSVKDFENLWERCACVYDGGVL-----PSGRAGSTVVDLTRLGKFKIL 207
LTSANL+ Q SS++V++F +LW + + V DGG + P R GSTVVDL+ GKF I+
Sbjct: 64 LTSANLSSQASSLNVEEFRDLWPQLSLVIDGGQIGGGQSPECRLGSTVVDLSVPGKFGII 123
Query: 208 RPGSAKEETIAILEK 222
RPG A E T AIL++
Sbjct: 124 RPGCALESTTAILQQ 138
>gi|402587524|gb|EJW81459.1| YrdC domain-containing protein [Wuchereria bancrofti]
Length = 232
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 113/194 (58%), Gaps = 13/194 (6%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
+Q ++G ++A+PTDTLYG +S+ ++Y++K R PL + V +V ++ R+
Sbjct: 26 CLQIFESGGIVALPTDTLYGVVTTLSNSD---KLYKLKRRSRLKPLGLFVSNVREVQRWC 82
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ + L +LLPGPVT++ R S++L NP ++G+R+PD +FVR + L+
Sbjct: 83 -HQTIDNSQLRTLLPGPVTLIFER--STSLPSIFNPEHGTVGIRIPDHDFVRSLMTRLDD 139
Query: 150 A-LALTSANLTG-QPSSVSVKDFENLWERCACVYDGGVLPS-----GRAGSTVVDLTRLG 202
LA TSAN++ Q S V ++DF++LW + D G++ R GSTVV+L+ G
Sbjct: 140 VPLAQTSANISNDQSSPVCIEDFKDLWPELDLIIDDGIVLHRDGNVNREGSTVVNLSIPG 199
Query: 203 KFKILRPGSAKEET 216
+ I+R G A+ T
Sbjct: 200 TYSIIRDGCARTAT 213
>gi|418406265|ref|ZP_12979584.1| hypothetical protein AT5A_03550 [Agrobacterium tumefaciens 5A]
gi|358006758|gb|EHJ99081.1| hypothetical protein AT5A_03550 [Agrobacterium tumefaciens 5A]
Length = 325
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 3/195 (1%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E + A++ L G+ IA+PT+T+YG A DA A+ RIYE KGR +PL + D++
Sbjct: 12 ETALQAAVEELSRGQPIALPTETVYGLAADATDPAAIARIYETKGRPQFNPLICHMADIA 71
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
R+AV D + L ++ PGP+T+VL +S + GL+++G+RVP F +
Sbjct: 72 MAERYAVFDPVSRRLAETFWPGPLTLVLPLKPASGIHSLATAGLDTVGIRVP-QGFAGDL 130
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
R + LA SAN +G+ S S E +L R + DGG G ST+V + G
Sbjct: 131 IRRFDKPLAAPSANSSGKISPTSAAHVEADLGNRINLILDGGAASVG-VESTIVKVEDDG 189
Query: 203 KFKILRPGSAKEETI 217
+ ++LRPG E I
Sbjct: 190 RVRLLRPGGIVTEEI 204
>gi|417859074|ref|ZP_12504131.1| hypothetical protein Agau_C102117 [Agrobacterium tumefaciens F2]
gi|338825078|gb|EGP59045.1| hypothetical protein Agau_C102117 [Agrobacterium tumefaciens F2]
Length = 333
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 112/210 (53%), Gaps = 10/210 (4%)
Query: 9 QVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKG 68
+++EN+ E + A+ L G+ IA+PT+T+YG A DA + A+ RIYE KG
Sbjct: 12 HINIENE-------RETALQAAVTELADGQPIALPTETVYGLAADATNPAAITRIYETKG 64
Query: 69 RKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLE 128
R +PL + D++ R+AV D + L ++ PGP+T+VL +S + GL+
Sbjct: 65 RPQFNPLICHMADIAMAERYAVFDPVSRRLAEAFWPGPLTLVLPLKPASGIHSLATAGLD 124
Query: 129 SIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLP 187
++G+RVP F + R + LA SAN +G+ S S E +L ++ + DGG
Sbjct: 125 TVGIRVPQ-GFAGDLIRRFDRPLAAPSANSSGKISPTSAAHVEADLGQKINLILDGGAAS 183
Query: 188 SGRAGSTVVDLTRLGKFKILRPGSAKEETI 217
G ST+V + G+ ++LRPG E I
Sbjct: 184 VG-VESTIVKVEEDGRVRLLRPGGIVTEEI 212
>gi|170590097|ref|XP_001899809.1| yrdC domain containing protein [Brugia malayi]
gi|158592728|gb|EDP31325.1| yrdC domain containing protein [Brugia malayi]
Length = 232
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 117/205 (57%), Gaps = 13/205 (6%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+Q ++G ++A+PTDT+YG A +S+ ++Y++K R PL + V +V ++ R+
Sbjct: 25 RCLQIFESGGIVALPTDTVYGVATALPNSD---KLYKLKRRSRLKPLGLFVSNVREVQRW 81
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
+ + L +LLPGPVT++ R S++L NP ++G+R+PD +FVR + L+
Sbjct: 82 C-HQTIDNNQLRTLLPGPVTLIFER--STSLPSIFNPEHGTVGIRIPDHDFVRSLMTRLD 138
Query: 149 SA-LALTSANLTG-QPSSVSVKDFENLWERCACVYDGGVLPS-----GRAGSTVVDLTRL 201
LA TSAN++ Q S V ++DF++LW + D G++ R GSTVV+L+
Sbjct: 139 DVPLAQTSANISNDQSSPVCIEDFKDLWPELDLIIDDGIVFQRDGNVNREGSTVVNLSIP 198
Query: 202 GKFKILRPGSAKEETIAILEKHSLV 226
G + I+R G A+ T L L+
Sbjct: 199 GTYSIIRDGCARTATEEKLRDCGLI 223
>gi|418296479|ref|ZP_12908322.1| hypothetical protein ATCR1_03129 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355538654|gb|EHH07896.1| hypothetical protein ATCR1_03129 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 325
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 112/207 (54%), Gaps = 8/207 (3%)
Query: 28 EEAIQA----LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E A+QA L G+ IA+PT+T+YG A DA + A+ RIYE KGR +PL + D++
Sbjct: 12 ETALQAAATELAAGQPIALPTETVYGLAADATNPAAITRIYETKGRPQFNPLICHMADIA 71
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
R+AV D + L ++ PGP+T+VL + S++ GL+++G+RVP F +
Sbjct: 72 MAERYAVFDPISLKLAEAFWPGPLTLVLPLKQESDIHSLATAGLDTVGIRVP-QGFAGDL 130
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
R LA SAN +G+ S S E +L ++ + DGG G ST+V + G
Sbjct: 131 IRRFGRPLAAPSANSSGKISPTSAAHVEADLGQKINLILDGGAASVG-VESTIVKVEEDG 189
Query: 203 KFKILRPGSAKEETIAILEKHSLVEEP 229
+ ++LRPG E I + SL E P
Sbjct: 190 RVRLLRPGGIVTEDIERVAGKSL-ERP 215
>gi|334128799|ref|ZP_08502678.1| Sua5/YciO/YrdC/YwlC family protein [Centipeda periodontii DSM 2778]
gi|333386211|gb|EGK57429.1| Sua5/YciO/YrdC/YwlC family protein [Centipeda periodontii DSM 2778]
Length = 350
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 11/215 (5%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++RP A E A +++G ++A PT+T+YG + + A RIYE KGR +PL +
Sbjct: 5 ILRPTAPADFERAAGLIRSGALVAFPTETVYGLGANGLDAAACTRIYEAKGRPSDNPLIL 64
Query: 78 CVGDVSDINRFAVTDHLPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVP 135
+ D++ A +D P LL + PGP+TV+L + ++++ + GL ++GVR P
Sbjct: 65 HIADLTMAYEIA-SDVPPIAAHLLTAFAPGPLTVILPK--AAHIPDIVTGGLATVGVRCP 121
Query: 136 DSNFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAG-- 192
D+ R + R +A SAN +G+PS + + +E++ R + DGG S R G
Sbjct: 122 DNIIARHLIRAAGVPIAAPSANTSGRPSPTTAAMVYEDMAGRIPLILDGG---SCRLGVE 178
Query: 193 STVVDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
ST+VD T G ILRPG+ E IA+ H +V
Sbjct: 179 STIVDCTEEGALTILRPGAVTREMIAMELPHVIVR 213
>gi|395785863|ref|ZP_10465591.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella tamiae Th239]
gi|423717242|ref|ZP_17691432.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella tamiae Th307]
gi|395424321|gb|EJF90508.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella tamiae Th239]
gi|395427457|gb|EJF93548.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella tamiae Th307]
Length = 319
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 117/220 (53%), Gaps = 12/220 (5%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P + ++A+ L GK++A+PT+T+YG A DA + +AV I+ +KGR +PL +
Sbjct: 3 ILPVEKKTIDKAVALLADGKLVALPTETVYGLAADATNGKAVASIFAVKGRPQFNPLIVH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + RF D + L+++ PGP+T+VL+ + + + GL ++ +R P
Sbjct: 63 VNSIGMAERFVHIDSISQKLMNAFWPGPLTLVLALKDEHTIHPLSSAGLPTLAIRQPQGV 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVD 197
F ++ + L+ LA SANL+G+ S S +D + L ++ + D G G ST+V
Sbjct: 123 FADIVTQ-LDVPLAAPSANLSGRLSPTSAQDVSDMLGDQIPLIVDAGAASVG-VESTIVK 180
Query: 198 LTRLGKFKILRPGSAKEETIAIL--------EKHSLVEEP 229
+T G F +LRPG E I L E+H+ +E P
Sbjct: 181 VTHEGVF-LLRPGGVISEEIEALIKMPLKRMEQHTAIEAP 219
>gi|268532948|ref|XP_002631602.1| Hypothetical protein CBG20783 [Caenorhabditis briggsae]
Length = 216
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 109/205 (53%), Gaps = 7/205 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E + A+ G ++A+PTDTLYG + S+ R+Y +K R PL I + +
Sbjct: 16 EEAIDTAVSVFLRGGIVALPTDTLYGISTLLPFSD---RLYALKQRPFEKPLGIFLPSPT 72
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ + + L + LLPGPVT++ R + L NPG+ ++ RVPD V +I
Sbjct: 73 SM-KLVSKQTISDELANCLLPGPVTLMFERLPT--LPAEFNPGVANVACRVPDCPIVSMI 129
Query: 144 ARGLESALALTSANLTGQP-SSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
R L LA TSAN++G P + S+ F++L + D G + S GST+VDLT
Sbjct: 130 CRKLGQPLAQTSANVSGSPLNPTSIDHFKDLQPYIDLILDNGQIVSTGEGSTIVDLTVES 189
Query: 203 KFKILRPGSAKEETIAILEKHSLVE 227
KF+I+R G A++ET+ L+ L E
Sbjct: 190 KFRIVRSGCAEKETMKTLKSFGLTE 214
>gi|300709454|ref|YP_003735268.1| Sua5/YciO/YrdC/YwlC family protein [Halalkalicoccus jeotgali B3]
gi|448297776|ref|ZP_21487819.1| Sua5/YciO/YrdC/YwlC family protein [Halalkalicoccus jeotgali B3]
gi|299123137|gb|ADJ13476.1| Sua5/YciO/YrdC/YwlC family protein [Halalkalicoccus jeotgali B3]
gi|445578646|gb|ELY33049.1| Sua5/YciO/YrdC/YwlC family protein [Halalkalicoccus jeotgali B3]
Length = 192
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 111/198 (56%), Gaps = 11/198 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A++A++ G+++ PT+T+YG DA AV R+YE KGR + PL++ V DV R
Sbjct: 4 DRAVRAIRAGELVVYPTETVYGLGADALDPAAVERVYEAKGRARSKPLSMAVPDVEAAAR 63
Query: 88 F-AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
++TDH + LPGPVTVV++ G + ++L G + +G+R+PD + +
Sbjct: 64 HTSLTDH-ERAFMREFLPGPVTVVVAAG--PEVPEALTAGRDRVGIRIPDQDLALSLLEE 120
Query: 147 LESALALTSANLTGQPSSVSVKDFENLWER-CACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+ + + TSAN +GQ S+ V D + R ACV DGG +G STVVD+ R +
Sbjct: 121 V-APITATSANASGQSSARRVADLDAGVRRAAACVLDGG--ETGGTESTVVDVER---GR 174
Query: 206 ILRPGSAKEETIAILEKH 223
+ R G+ EE A LE
Sbjct: 175 LHRRGALAEEIEAWLEAQ 192
>gi|308480641|ref|XP_003102527.1| hypothetical protein CRE_04025 [Caenorhabditis remanei]
gi|308261259|gb|EFP05212.1| hypothetical protein CRE_04025 [Caenorhabditis remanei]
Length = 215
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 7/205 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E + A+ G ++A+PTDTLYG + S+ R+Y +K R PL I + +
Sbjct: 15 EEAIDTAVSVFLRGGIVALPTDTLYGISTLLPFSD---RLYALKQRPFEKPLGIFLPSPT 71
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ + + L + LLPGPVT++ R NL NPG+ ++ RVPD V I
Sbjct: 72 SM-KLVSKQTISDELANCLLPGPVTLMFER--LPNLPDEFNPGVVNVACRVPDCAIVSRI 128
Query: 144 ARGLESALALTSANLTGQP-SSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
R L LA TSAN++G P + S+ F+NL + D G + S GST+VDLT
Sbjct: 129 CRKLGQPLAQTSANVSGSPLNPTSIDHFKNLHSNIDLILDNGQIVSSGEGSTIVDLTVES 188
Query: 203 KFKILRPGSAKEETIAILEKHSLVE 227
F+I+R G A+ ETI L+ L E
Sbjct: 189 CFRIVRSGCAESETIKKLKSFGLTE 213
>gi|73666905|ref|YP_302921.1| translation factor SUA5 [Ehrlichia canis str. Jake]
gi|72394046|gb|AAZ68323.1| translation factor SUA5 [Ehrlichia canis str. Jake]
Length = 198
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 107/189 (56%), Gaps = 9/189 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+AIQAL +IA PT+T+Y A DA S EA+ +IY+IKGR + PL++ VG+++ I +F
Sbjct: 4 KAIQALNNKHLIAFPTETVYALAGDAYSIEAIQKIYQIKGRSYNKPLSLLVGNINKIKQF 63
Query: 89 A-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ +TDH ++ L PGP+T VL L + +IG+R+P+ I +
Sbjct: 64 SNLTDHAI-KIIQKLSPGPITFVLPIHNYHKLPRQFFNN--TIGIRIPNHPIALEIVNKI 120
Query: 148 ESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
E+ + TS N++GQPS + E + + + + L +G STV+DLT +KI
Sbjct: 121 ENPVVGTSINISGQPSVTAAHQIHETIKKHISVTIEDDSLVNG-TESTVIDLT---SYKI 176
Query: 207 LRPGSAKEE 215
LR G+ E+
Sbjct: 177 LRAGAVAEK 185
>gi|408788463|ref|ZP_11200182.1| hypothetical protein C241_21357 [Rhizobium lupini HPC(L)]
gi|408485705|gb|EKJ94040.1| hypothetical protein C241_21357 [Rhizobium lupini HPC(L)]
Length = 325
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 103/184 (55%), Gaps = 3/184 (1%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A+ L G+ IA+PT+T+YG A DA + A+ RIYE KGR +PL + D++ R
Sbjct: 16 QAAVTELAAGQPIALPTETVYGLAADATNPAAIARIYETKGRPQFNPLICHMADIAMAER 75
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+A+ D + L ++ PGP+T+VL +S++ GL+++G+RVP F + R
Sbjct: 76 YAIFDPISLDLAEAFWPGPLTLVLPLKPASDIHALATAGLDTVGIRVPQ-GFAGDLIRRF 134
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G+ S S E +L ++ + DGG G ST+V + G+ ++
Sbjct: 135 GKPLAAPSANSSGKISPTSAAHVEADLGQKINLILDGGAASVG-VESTIVKVEEGGRVRL 193
Query: 207 LRPG 210
LRPG
Sbjct: 194 LRPG 197
>gi|424909612|ref|ZP_18332989.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392845643|gb|EJA98165.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium leguminosarum bv.
viciae USDA 2370]
Length = 325
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 3/184 (1%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A+ L G+ IA+PT+T+YG A DA + A+ RIYE KGR +PL + D++ R
Sbjct: 16 QAAVTELAAGQPIALPTETVYGLAADATNPAAIARIYETKGRPQFNPLICHMADIAMAER 75
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+A+ D + L + PGP+T+VL +S++ GL+++G+RVP F + R
Sbjct: 76 YAIFDPMSLDLAQAFWPGPLTLVLPLKPASDIHALATAGLDTVGIRVPQ-GFAGDLIRRF 134
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G+ S S E +L ++ + DGG G ST+V + G+ ++
Sbjct: 135 GKPLAAPSANSSGKISPTSAAHVEADLGQKINLILDGGAASVG-VESTIVKVEEDGRVRL 193
Query: 207 LRPG 210
LRPG
Sbjct: 194 LRPG 197
>gi|449687608|ref|XP_002169716.2| PREDICTED: yrdC domain-containing protein, mitochondrial-like,
partial [Hydra magnipapillata]
Length = 143
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 83/133 (62%), Gaps = 5/133 (3%)
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
+ +L+ LLPGPVT+V R SS L LNP SIGVR+P F++ +A+ + +AL
Sbjct: 6 ISDNVLEDLLPGPVTLVFQR--SSLLNSYLNPTSNSIGVRIPKCAFIQTLAQKCQQPIAL 63
Query: 154 TSANLTGQPSSVSVKDFENLWERCACVYDGGVLPS---GRAGSTVVDLTRLGKFKILRPG 210
TSAN++ SS+ + +FE LW + + DGG L S R GSTVVDLT+ G+F I+R G
Sbjct: 64 TSANISSAMSSLDINEFEELWPKLDLIVDGGTLGSSEQSRLGSTVVDLTKEGEFTIIREG 123
Query: 211 SAKEETIAILEKH 223
A E + IL K+
Sbjct: 124 CAYNEVVNILHKY 136
>gi|332637162|ref|ZP_08416025.1| SUA5 family translation factor [Weissella cibaria KACC 11862]
Length = 342
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 108/182 (59%), Gaps = 4/182 (2%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A++A+K G ++A PT+T+YG DA + +AV+++Y KGR +PL + V D + ++RFA
Sbjct: 15 AVRAIKRGSLVAFPTETVYGLGADAFNEKAVSKVYAAKGRPSDNPLIVHVADKAQVDRFA 74
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
V + L+D+ PGP+T++L + + ++ GL+++ R+PD++ R + R ++
Sbjct: 75 VVNAWAEKLMDAFWPGPLTMILPV-KPGTVSTTVTGGLDTVAARMPDNDVTRALIREADA 133
Query: 150 ALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
+ SAN +G+PS + + + +L + + + D G G STV+DL+ +LR
Sbjct: 134 PMVGPSANTSGKPSPTTAQHVYHDLHGKISGILDDGATKIG-VESTVIDLST-DTPAVLR 191
Query: 209 PG 210
PG
Sbjct: 192 PG 193
>gi|83945388|ref|ZP_00957736.1| Sua5/YciO/YrdC family protein [Oceanicaulis sp. HTCC2633]
gi|83851222|gb|EAP89079.1| Sua5/YciO/YrdC family protein [Oceanicaulis alexandrii HTCC2633]
Length = 327
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 102/191 (53%), Gaps = 2/191 (1%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EEA + LK G +A+PT+T+YG ACDA +++AV +YE KGR +PL V V
Sbjct: 22 EEAARLLKAGGCVALPTETVYGLACDATNADAVAGVYEAKGRPSFNPLICHVDTVERARA 81
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
D L D+ PGP+T+V S+ S + GL+S+ VR+P S +R + L
Sbjct: 82 LIDLDETGEQLADAFWPGPLTLVASKRAPSPVSDLAAAGLDSLAVRLPRSEALRALVSRL 141
Query: 148 ESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
++ LA SAN +G S + + ++ L R + DGG P G ST+V L G+ +
Sbjct: 142 DAPLAAPSANASGTISPTTAQHVKDSLNGRIHLILDGGACPVG-VESTIVSLLEPGRPTL 200
Query: 207 LRPGSAKEETI 217
LRPG E +
Sbjct: 201 LRPGGVAREQL 211
>gi|326386145|ref|ZP_08207769.1| translation factor SUA5 [Novosphingobium nitrogenifigens DSM 19370]
gi|326209370|gb|EGD60163.1| translation factor SUA5 [Novosphingobium nitrogenifigens DSM 19370]
Length = 320
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 103/196 (52%), Gaps = 2/196 (1%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A + ++ G ++AVPT+T+YG A A EAV IY KGR +PL + V D++ R
Sbjct: 23 RAAEVIREGGLVAVPTETVYGLAARADRDEAVAGIYRAKGRPDFNPLIVHVADIAGAERL 82
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A D L+++ PGP+T+V+ R E + L +++ GL ++ +R P +R +
Sbjct: 83 AHLDATARKLIEAFWPGPLTLVVPRREDAGLSAAVSAGLPTVALRCPAHPVMRALIEAAG 142
Query: 149 SALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
LA SAN +G S + F +L R + DGG G ST+V + G++ +L
Sbjct: 143 VPLAAPSANRSGGVSPTTADHVFSSLGHRVDLILDGGTCARGLE-STIVGVRPGGRWTLL 201
Query: 208 RPGSAKEETIAILEKH 223
RPG ET+A L H
Sbjct: 202 RPGPIDRETLAALLGH 217
>gi|320529371|ref|ZP_08030459.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas artemidis F0399]
gi|320138337|gb|EFW30231.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas artemidis F0399]
Length = 355
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 9/205 (4%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++ P +A A Q ++ G ++A PT+T+YG + A RIY KGR +PL +
Sbjct: 5 IISPVRDADIAHAAQMIRDGALVAFPTETVYGLGANGLDVAACARIYAAKGRPSDNPLIL 64
Query: 78 CVGDVS---DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRV 134
+ D+S D R VT H LL + PGP+TV+L + ++++ + GL ++GVR
Sbjct: 65 HIADLSMAADAARI-VTPAAAH-LLTAFAPGPITVILPK--AAHVPDIVTGGLSTVGVRC 120
Query: 135 PDSNFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGS 193
PD + R + R +A SAN +G+PS + ++L R C+ DGG G S
Sbjct: 121 PDHDIARALIRAAGVPIAAPSANTSGRPSPTTAAMVSDDLAGRIPCILDGGACRWG-VES 179
Query: 194 TVVDLTRLGKFKILRPGSAKEETIA 218
T+VD T G +LRPG+ E IA
Sbjct: 180 TIVDCTEDGIVTVLRPGAVTREMIA 204
>gi|292669718|ref|ZP_06603144.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas noxia ATCC 43541]
gi|422343207|ref|ZP_16424135.1| hypothetical protein HMPREF9432_00195 [Selenomonas noxia F0398]
gi|292648515|gb|EFF66487.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas noxia ATCC 43541]
gi|355378514|gb|EHG25694.1| hypothetical protein HMPREF9432_00195 [Selenomonas noxia F0398]
Length = 350
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 114/207 (55%), Gaps = 13/207 (6%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++ P + E A +++G+++A PT+T+YG + + A RIYE KGR +PL +
Sbjct: 5 ILHPTSSVDFERAAGLIQSGELVAFPTETVYGLGANGLDAAACTRIYEAKGRPSDNPLIL 64
Query: 78 CVGDVSDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRV 134
+ D++ + VT ++P LL + PGP+TV+L + ++++ + GL ++GVR
Sbjct: 65 HIADLTMAHE--VTSNMPPLAAHLLTAFAPGPITVILPK--AAHIPDIVTGGLSTVGVRC 120
Query: 135 PDSNFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAG- 192
PD R + R +A SAN +G+PS + + +E++ R + DGG S R G
Sbjct: 121 PDHTAARRLIRAAGVPIAAPSANTSGRPSPTTAAMVYEDMAGRIPLILDGG---SCRLGV 177
Query: 193 -STVVDLTRLGKFKILRPGSAKEETIA 218
ST+VD T G +LRPG+ E IA
Sbjct: 178 ESTIVDCTEEGALTLLRPGAVTREMIA 204
>gi|448622465|ref|ZP_21669159.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax denitrificans ATCC
35960]
gi|445754547|gb|EMA05952.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax denitrificans ATCC
35960]
Length = 200
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 16/202 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A++ G+ + PT+T+YG DA +++AV R+++IKGR PL+ DV
Sbjct: 7 QRAAAAVRRGEAVVYPTETVYGMGADATNADAVERVFDIKGRDRDKPLSAGFPDVDAALE 66
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
F V D + LPGPVTVV+ R +S L +L G + +GVRVPD R + R
Sbjct: 67 FVVADDREEAFMRRFLPGPVTVVVERRDS--LPDALVAGKDRVGVRVPDHELARALFRAA 124
Query: 148 ESALALTSANLTG-----QPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ + TSAN +G PS +S + + + A V DGG P STVVD G
Sbjct: 125 GTPVTATSANRSGTGSITHPSQLS----DEIRDAVAVVLDGGTTPGTE--STVVD---PG 175
Query: 203 KFKILRPGSAKEETIAILEKHS 224
+ + R G+ ++ A L++H+
Sbjct: 176 RGVVHRRGAMADDIEAWLDEHA 197
>gi|448579064|ref|ZP_21644380.1| DNA binding protein, translation factor [Haloferax larsenii JCM
13917]
gi|445724417|gb|ELZ76050.1| DNA binding protein, translation factor [Haloferax larsenii JCM
13917]
Length = 202
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 105/197 (53%), Gaps = 10/197 (5%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV-SDINRF 88
A A++ G + PT+T+YG DA S EAV R+++IKGR PL+ DV S ++
Sbjct: 14 AAAAIRDGDAVVYPTETVYGMGADATSPEAVERVFDIKGRDRDKPLSAGFPDVDSALDYV 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
VTDH + LPGPVTVV+ R ES L L G + +GVRVPD + + R E
Sbjct: 74 EVTDH-EEAFMRRFLPGPVTVVVERRES--LPDVLVSGRDRVGVRVPDHDLALELFRAAE 130
Query: 149 SALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ + TSANL+G S + + + + A V DGG P STVVD G+ +
Sbjct: 131 TPVTATSANLSGAGSITNPSQLPDEILDAVAAVLDGGTTPGTE--STVVD---PGQGIVH 185
Query: 208 RPGSAKEETIAILEKHS 224
R G+ ++ A LE H+
Sbjct: 186 RRGAMADDIEAWLETHA 202
>gi|390629609|ref|ZP_10257603.1| SUA5 family translation factor [Weissella confusa LBAE C39-2]
gi|390485245|emb|CCF29951.1| SUA5 family translation factor [Weissella confusa LBAE C39-2]
Length = 342
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 105/182 (57%), Gaps = 4/182 (2%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A++A+K G ++A PT+T+YG DA + AV ++Y KGR +PL + V D ++RFA
Sbjct: 15 AVRAIKRGSLVAFPTETVYGLGADAFNDTAVGKVYAAKGRPSDNPLIVHVSDPEQVDRFA 74
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ L+D+ PGP+T++L + + ++ GL+++ R+PD++ R + R ++
Sbjct: 75 EVNDWAKKLMDAFWPGPLTMILPV-KPGTVSTTVTGGLDTVAARMPDNDLTRALIREADA 133
Query: 150 ALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
L SAN +G+PS + + + +L + A + D G G STV+DL+ + +LR
Sbjct: 134 PLVGPSANTSGKPSPTTAQHVYHDLHGKIAGILDDGATKIG-VESTVIDLST-DQPAVLR 191
Query: 209 PG 210
PG
Sbjct: 192 PG 193
>gi|68171141|ref|ZP_00544550.1| Sua5/YciO/YrdC/YwlC [Ehrlichia chaffeensis str. Sapulpa]
gi|88658214|ref|YP_507600.1| Sua5/YciO/YrdC/YwlC family protein [Ehrlichia chaffeensis str.
Arkansas]
gi|67999466|gb|EAM86106.1| Sua5/YciO/YrdC/YwlC [Ehrlichia chaffeensis str. Sapulpa]
gi|88599671|gb|ABD45140.1| Sua5/YciO/YrdC/YwlC family protein [Ehrlichia chaffeensis str.
Arkansas]
Length = 194
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA+QALK +I PT+T+Y A A S EAV +IY+IKGR + PL++ + ++ I +F
Sbjct: 4 EAVQALKNKHLILFPTETVYALAGSAYSIEAVQKIYQIKGRSYNKPLSLLLSNIDKIKQF 63
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
+ ++ L PGPVT VL + L + ++IG+R+PD I +
Sbjct: 64 STLTEHTFKIIQKLSPGPVTFVLPIHNYNKLPRQFFN--DTIGIRIPDHPIALEILSNFD 121
Query: 149 SALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ + TS N++GQPS + S + E + + + + + L +G STV+DLT +KIL
Sbjct: 122 NPVVGTSVNISGQPSVTASHQVQETIKQHISVIIEDDSLVNG-IESTVIDLT---SYKIL 177
Query: 208 RPGSAKEETI 217
R G+ E+ I
Sbjct: 178 RTGAVSEKKI 187
>gi|341892285|gb|EGT48220.1| hypothetical protein CAEBREN_06828 [Caenorhabditis brenneri]
Length = 215
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 7/205 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E + A+ G ++A+PTDTLYG + S+ R+Y +K R PL I + +
Sbjct: 15 EEAIDTAVSVFLRGGIVALPTDTLYGISTLLPYSD---RLYALKQRPFEKPLGIFLPSPT 71
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ + + L + LLPGPVT++ R + L NPG+ ++ RVPD V I
Sbjct: 72 SM-KLVSKQTISDELANCLLPGPVTLMFERLPT--LPAEFNPGVLNVACRVPDCPIVSRI 128
Query: 144 ARGLESALALTSANLTGQP-SSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
R L LA TSAN++G P + S+ F+NL + D G + S GST+VDLT
Sbjct: 129 CRKLGQPLAQTSANVSGSPLNPTSIDHFKNLHSNIDLILDNGRIISSGEGSTIVDLTVES 188
Query: 203 KFKILRPGSAKEETIAILEKHSLVE 227
++I+R G A+++T+ LE L E
Sbjct: 189 SYRIIRSGCAEKDTVEKLEMFGLTE 213
>gi|57239024|ref|YP_180160.1| hypothetical protein Erum2950 [Ehrlichia ruminantium str.
Welgevonden]
gi|58578965|ref|YP_197177.1| hypothetical protein ERWE_CDS_03010 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161103|emb|CAH58012.1| conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
gi|58417591|emb|CAI26795.1| Conserved hypothetical protein (putative translation factor SUA5
family) [Ehrlichia ruminantium str. Welgevonden]
Length = 199
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 113/201 (56%), Gaps = 10/201 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A++ALK ++I PT+T+Y A DA S E + +IY+IK R + P+++ + ++ I +F
Sbjct: 4 KAVEALKNKQLICFPTETVYALAGDAYSIEVIQKIYKIKNRPYNKPVSLLLSNIDQIKQF 63
Query: 89 A-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ +T+H + ++ L PGP+T +L L K IG+R+P+ I
Sbjct: 64 SNLTEHTAY-IIQQLSPGPITFILPIHNYGKLPKQF--FYNKIGIRIPNHPIALAILNNF 120
Query: 148 ESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ + TS N++GQ ++SV +N+ + + + D L G A STV+DLT +KI
Sbjct: 121 DHPITATSVNISGQQDAISVDQISDNIKKNISFIIDNNRLVHGTA-STVIDLTS---YKI 176
Query: 207 LRPGSAKEETIA-ILEKHSLV 226
LR G+ ++ I IL+K +++
Sbjct: 177 LRKGAVTKQKIQEILKKINII 197
>gi|311032025|ref|ZP_07710115.1| sua5/yciO/yrdC/ywlC family protein [Bacillus sp. m3-13]
gi|311033339|ref|ZP_07711429.1| sua5/yciO/yrdC/ywlC family protein [Bacillus sp. m3-13]
Length = 350
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 10/193 (5%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA LK +V+A PT+T+YG +A S +AV +I+E KGR +PL + + + +
Sbjct: 23 EAAGLLKENEVVAFPTETVYGLGANALSDQAVLKIFEAKGRPSDNPLIVHISKLEQLAEL 82
Query: 89 AVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
D++P H L+++ PGP+T+VL++ E + + + GLE++ VR+PD + R +
Sbjct: 83 --VDNVPESAHKLMEAFWPGPLTLVLTKKE--GVSQYVTAGLETLAVRMPDHSVARALIE 138
Query: 146 GLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
LA SANL+G+PS + K E+L R A + DGG G STVVD T
Sbjct: 139 ISGLPLAAPSANLSGKPSPTTAKHVEEDLIHRIAGIVDGGATGVGLE-STVVDCTAETPM 197
Query: 205 KILRPGSAKEETI 217
ILRPG +E +
Sbjct: 198 -ILRPGGVTKEEL 209
>gi|427393452|ref|ZP_18887230.1| Sua5/YciO/YrdC/YwlC family protein [Alloiococcus otitis ATCC 51267]
gi|425730670|gb|EKU93504.1| Sua5/YciO/YrdC/YwlC family protein [Alloiococcus otitis ATCC 51267]
Length = 332
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 10/195 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A+ L+ G+++A PT+T+YG DA + +AV +IY+ KGR +PL + + V +
Sbjct: 12 DKAVTLLEEGELVAFPTETVYGLGADAKNDQAVQKIYQAKGRPSDNPLIVHIYSVDQVYD 71
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
F + +P LL++ PGP+T++L+ + + ++ G +SIG+R+P R +
Sbjct: 72 F--SSRIPSRAQDLLNAFWPGPLTIILNHDQET-AAPTVTSGQDSIGIRMPSHPLARDLL 128
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLG 202
+ ALA SANL+G+PS S + +L R A V DGG P+G STVVD T
Sbjct: 129 KVSGLALAAPSANLSGRPSPTSADHVWHDLSGRIAGVLDGG--PTGLGLESTVVDFTNPD 186
Query: 203 KFKILRPGSAKEETI 217
+ ILRPG E I
Sbjct: 187 QPAILRPGGLAREDI 201
>gi|448606535|ref|ZP_21658961.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax sulfurifontis ATCC
BAA-897]
gi|445738743|gb|ELZ90255.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax sulfurifontis ATCC
BAA-897]
Length = 200
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A++ G+ + PT+T+YG DA +++AV R+++IKGR PL+ DV
Sbjct: 7 QRAADAVRRGEAVVYPTETVYGMGADATNADAVERVFDIKGRDRDKPLSAGFPDVDAALE 66
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
V D + LPGPVTVV+ R +S L +L G + +GVRVPD R + R
Sbjct: 67 HVVADAREEAFMRRFLPGPVTVVVERRDS--LPDALVAGKDRVGVRVPDHELARSLFRAA 124
Query: 148 ESALALTSANLTG-----QPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ + TSAN +G PS +S + + E A V DGG P STVVD G
Sbjct: 125 GTPVTATSANRSGTGSITHPSQLS----DEIREAVAVVLDGGTTPGTE--STVVD---PG 175
Query: 203 KFKILRPGSAKEETIAILEKHS 224
+ + R GS ++ A L++H+
Sbjct: 176 RGVVHRRGSMADDIEAWLDEHA 197
>gi|395646679|ref|ZP_10434539.1| Sua5/YciO/YrdC/YwlC family protein [Methanofollis liminatans DSM
4140]
gi|395443419|gb|EJG08176.1| Sua5/YciO/YrdC/YwlC family protein [Methanofollis liminatans DSM
4140]
Length = 193
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+A+Q L+ ++ PTDT+YG DA S A+ R+YE K R P+++ V D +
Sbjct: 7 HKAVQVLRRDGLVVYPTDTIYGLGADALSEYAIERVYEAKMRPRAMPVSVAVCDCEMLAA 66
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
AV D +D LPGPVTVVL S L + L G IGVR PD I R L
Sbjct: 67 IAVVDRAADAFIDRFLPGPVTVVLR--AKSCLPEILTGGTGLIGVRFPDHPVALAIIREL 124
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
++ + TSAN+ G P V+V D + + DGG LP STVVDL ++L
Sbjct: 125 DAPITATSANIHGGPDPVTVNDVHVPHD---LLIDGGHLPG--TPSTVVDLVH---RQVL 176
Query: 208 RPGSAKEETIAIL 220
R G+ EE L
Sbjct: 177 RMGAEIEEVAGFL 189
>gi|429768942|ref|ZP_19301070.1| Sua5/YciO/YrdC/YwlC family protein [Brevundimonas diminuta 470-4]
gi|429188293|gb|EKY29181.1| Sua5/YciO/YrdC/YwlC family protein [Brevundimonas diminuta 470-4]
Length = 312
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 100/199 (50%), Gaps = 3/199 (1%)
Query: 20 RPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICV 79
RPA E A +ALKTG+++ +PT+T+YG A DA + +AV RI+E KGR +PL V
Sbjct: 5 RPARGDSPEIAAEALKTGRLVILPTETVYGLAADASNPQAVARIFEAKGRPRFNPLIAHV 64
Query: 80 GDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
+ D AV D L ++ PGP+T+V + + GL+S+ VRVP
Sbjct: 65 ANAVDAEDIAVFDAKARALAEAFWPGPLTIVAPVRDRDRVCDLARAGLDSVAVRVPAHPR 124
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDL 198
R + + SAN +G+PS + D E + DGG G STVV +
Sbjct: 125 ARAVIGAFGGPVVAPSANRSGRPSPTTFADALEETGQAVGAAVDGGACAVG-VESTVVSV 183
Query: 199 TRLGKFKILRPGSAKEETI 217
GK +LRPGS E +
Sbjct: 184 LN-GKVSLLRPGSVTREEL 201
>gi|307354113|ref|YP_003895164.1| Sua5/YciO/YrdC/YwlC family protein [Methanoplanus petrolearius DSM
11571]
gi|307157346|gb|ADN36726.1| Sua5/YciO/YrdC/YwlC family protein [Methanoplanus petrolearius DSM
11571]
Length = 192
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 10/188 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA++ L+ +I PT+T+YG CDA S EAV+R+YE K R + P++I V D+ ++
Sbjct: 6 DEAVRVLRRDGIIVYPTETVYGLGCDALSDEAVSRLYEAKCRPLSKPVSIAVSDMEMLHA 65
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A+ D + LPGPVTV++ + + L G IG+R+PD++ I
Sbjct: 66 VAIIDEAEEKFIKRFLPGPVTVIVRAKKC--IPPVLTGGTGLIGIRMPDNDIAIEIIEKF 123
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
S + TSANL+G S V+V +++ + D G LP STVVDL KI+
Sbjct: 124 GSPITSTSANLSGDISPVTVSQVNVIYDH---IIDSGTLPGN--PSTVVDLV---NRKIV 175
Query: 208 RPGSAKEE 215
R G+ EE
Sbjct: 176 RAGAQIEE 183
>gi|58617022|ref|YP_196221.1| hypothetical protein ERGA_CDS_02950 [Ehrlichia ruminantium str.
Gardel]
gi|58416634|emb|CAI27747.1| Conserved hypothetical protein (putative translation factor SUA5
family) [Ehrlichia ruminantium str. Gardel]
Length = 199
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 112/201 (55%), Gaps = 10/201 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A++ALK ++I PT+T+Y A DA S E + +IY+IK R + P+++ + ++ I +F
Sbjct: 4 KAVEALKNKQLICFPTETVYALAGDAYSIEVIQKIYKIKNRPYNKPVSLLLSNIDQIKQF 63
Query: 89 A-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ +T+H + ++ L PGP+T +L L K IG+R+P+ I
Sbjct: 64 SNLTEHTAY-IIQELSPGPITFILPIHNYGKLPKQF--FYNKIGIRIPNHPIALAILNNF 120
Query: 148 ESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ + TS N++GQ + SV +N+ + + + D L G A STV+DLT +KI
Sbjct: 121 DHPITATSVNISGQQDATSVDQISDNIKKNISFIIDNNRLVHGTA-STVIDLTS---YKI 176
Query: 207 LRPGSAKEETIA-ILEKHSLV 226
LR G+ ++ I IL+K +++
Sbjct: 177 LRKGAVTKQKIQEILKKINII 197
>gi|390448210|ref|ZP_10233833.1| translation factor SUA5 [Nitratireductor aquibiodomus RA22]
gi|389666849|gb|EIM78293.1| translation factor SUA5 [Nitratireductor aquibiodomus RA22]
Length = 318
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 103/201 (51%), Gaps = 4/201 (1%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
A++ L+ G IA+PT+T+YG A DA + EAV RIYE KGR +PL V D R
Sbjct: 12 RRAVELLRAGAAIAIPTETVYGLAADATNGEAVARIYETKGRPQFNPLIAHVADREMAER 71
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
AV + L L D+ PGP+T+VL S + + GL++I +R P RVI L
Sbjct: 72 IAVFNLLARRLADAFWPGPLTLVLPHRAGSGVHPLVTAGLDTIALRCPKGFGARVI-EAL 130
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+A SAN +G+ S + + E +L R + DGG P G ST+V + +
Sbjct: 131 GRPVAAPSANSSGRISGTTAEAVEADLGSRIPLIVDGGPTPVGLE-STIVKVGE-DSITL 188
Query: 207 LRPGSAKEETIAILEKHSLVE 227
LRPG + I + SL+
Sbjct: 189 LRPGGVAADEIERVTGMSLMR 209
>gi|340344650|ref|ZP_08667782.1| Sua5 superfamily-related protein [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519791|gb|EGP93514.1| Sua5 superfamily-related protein [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 357
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 122/222 (54%), Gaps = 12/222 (5%)
Query: 2 AFSLENGQVSVENKAGLVRPATE--AHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEA 59
A L QV ++ K + + + +A + +K+G ++A PT+T+YG +A S++
Sbjct: 3 AIVLIKNQVKMQTKILKINSKSPQISKIRQASKIIKSGNIVAFPTETVYGLGANALDSDS 62
Query: 60 VNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGES 116
V +I+ KGR +PL I + D+SD+ R T +P H L+ PGP+T+VL + S
Sbjct: 63 VKKIFVAKGRPSDNPLIIHISDISDLKRL--TADIPTTAHKLIRKFWPGPLTLVLKK--S 118
Query: 117 SNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWE 175
+ K G+ ++ VR+P++ +++ + LA SAN++G+PS + S FE++
Sbjct: 119 KIVPKITTGGINTVAVRMPENKIAKLLIHETGTPLAAPSANISGRPSPTTSGHVFEDMNG 178
Query: 176 RCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETI 217
+ + + DGG G STV+DL+R +LRPG+ E +
Sbjct: 179 KISMIIDGGKTKIG-IESTVIDLSRKTPM-LLRPGAVTLEQL 218
>gi|427428694|ref|ZP_18918734.1| YrdC/Sua5 family protein [Caenispirillum salinarum AK4]
gi|425881802|gb|EKV30486.1| YrdC/Sua5 family protein [Caenispirillum salinarum AK4]
Length = 319
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 102/194 (52%), Gaps = 3/194 (1%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+RPA +A EA + L+ G ++A PT+T+YG DA S AV I+E KGR +PL +
Sbjct: 4 IRPAADATLAEAGRLLRDGALVAFPTETVYGLGGDATSESAVAGIFEAKGRPRFNPLIVH 63
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V D + R D + D+ PGP+T+VL R S L ++ GL+S+ VRVP
Sbjct: 64 VPDAAAAARLVEMDDRAKAVADAFWPGPLTLVLPRRADSGLSLLVSAGLDSVAVRVPAHP 123
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVD 197
+ + R +A SAN +G S E+L +R A + DGG G STV+D
Sbjct: 124 VAQGLLRAAGRPVAAPSANRSGAISPTRAAHVEESLGDRVALIVDGGPCAVGLE-STVLD 182
Query: 198 LTRLGKFKILRPGS 211
LT ILRPG+
Sbjct: 183 LT-TPTATILRPGA 195
>gi|304438487|ref|ZP_07398427.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368570|gb|EFM22255.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 350
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 115/220 (52%), Gaps = 7/220 (3%)
Query: 15 KAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSP 74
K ++RP + H A ++ G+++A PT+T+YG + + A RIYE KGR +P
Sbjct: 2 KTEILRPTSTEHFARAAALIRDGQLVAFPTETVYGLGANGLDAAACARIYEAKGRPSDNP 61
Query: 75 LAICVGDVSDINRFAVTDHLPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGV 132
L + + D+S ++ A D P LL + PGP+TV++ + ++++ + GL ++GV
Sbjct: 62 LILHIADLSMLHE-AAEDVPPAAAHLLTAFAPGPITVIVPK--AAHIPPLVTGGLATVGV 118
Query: 133 RVPDSNFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRA 191
R P + R + R +A SAN++G+PS + + ++ R + DGG G
Sbjct: 119 RCPAHDVARRLIRAAGMPIAAPSANISGRPSPTTAAMTAADMMGRIPLILDGGSCSWG-V 177
Query: 192 GSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVEEPAA 231
ST+VD T G ILRPG+ E I+ H V AA
Sbjct: 178 ESTIVDCTEEGCITILRPGAVTPEMISAELPHLTVRMDAA 217
>gi|162457645|ref|YP_001620012.1| translation factor [Sorangium cellulosum So ce56]
gi|161168227|emb|CAN99532.1| Putative translation factor [Sorangium cellulosum So ce56]
Length = 201
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 107/199 (53%), Gaps = 10/199 (5%)
Query: 18 LVRPATEAHAE-----EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHT 72
+++P H E AI ++ G+VI PTDT+YGF CD + A+ R+Y+IKG +
Sbjct: 1 MLQPINPDHPEPRKIARAIDLIQKGEVIGYPTDTVYGFGCDLMNKAAIERVYQIKGMRQN 60
Query: 73 SPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGV 132
LA D+SDI R+A+ ++ + +L LPGP T +L + + K ++ +++G+
Sbjct: 61 KNLAFICPDLSDIARYAIVENQTYRILKRYLPGPYTFILP--ATREVPKYVHLKQKTVGI 118
Query: 133 RVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAG 192
RVP+ + R L L T+A G+ + + ++ + A V D G G
Sbjct: 119 RVPNHPVALALVRALGRPLISTTAAPPGEDPIIDPGEIDDRFPGLALVLDAGT--GGSVP 176
Query: 193 STVVDLTRLGKFKILRPGS 211
+TV+DL++ G+ +I+R G+
Sbjct: 177 TTVIDLSQ-GEVQIVREGA 194
>gi|408378614|ref|ZP_11176211.1| hypothetical protein QWE_13498 [Agrobacterium albertimagni AOL15]
gi|407747751|gb|EKF59270.1| hypothetical protein QWE_13498 [Agrobacterium albertimagni AOL15]
Length = 330
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 106/194 (54%), Gaps = 4/194 (2%)
Query: 40 IAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLL 99
+A+PT+T+YG A DA A+ IYE KGR +PL + D++ R+AV D + L
Sbjct: 30 VAIPTETVYGLAADATHPTAITSIYETKGRPRFNPLICHMADLAMAERYAVFDPISRKLA 89
Query: 100 DSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLT 159
++ PGP+T+VL E+S + GL+++G+RVP F + R L LA SAN +
Sbjct: 90 EAFWPGPLTLVLPLKENSGIHPLATAGLDTVGIRVP-VGFTAELIRSLGRPLAAPSANSS 148
Query: 160 GQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIA 218
G+ S + + + +L ++ + DGG P G ST+V + G+ ++LRPG E I
Sbjct: 149 GRISPTTAQHVDADLGQKIEVIVDGGPCPVG-VESTIVKVED-GEIRLLRPGGIAVEAIE 206
Query: 219 ILEKHSLVEEPAAG 232
+ +V A+G
Sbjct: 207 SVTGKPVVRPKASG 220
>gi|339634495|ref|YP_004726136.1| translation factor SUA5 [Weissella koreensis KACC 15510]
gi|338854291|gb|AEJ23457.1| translation factor SUA5 [Weissella koreensis KACC 15510]
Length = 343
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 111/195 (56%), Gaps = 5/195 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A++AL+ G++++ PT+T+YG DA + +AV+++Y KGR +PL + V +
Sbjct: 12 EPAVKALQKGQLVSFPTETVYGLGADAFNEKAVSKVYAAKGRPSDNPLIVHVSRPETVQT 71
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+A D L+D+ PGP+T++L ++ L + GL+++ R+PD++ R + +
Sbjct: 72 YAKVDARAQKLMDTFWPGPLTIILPI-QAGKLSALVTGGLQTVASRMPDNDLTRSLIDQV 130
Query: 148 ESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
S L SAN +G+PS +++ + +L + A V D G G STV+DL+ + I
Sbjct: 131 GSPLVGPSANTSGKPSPTIANHVYHDLHGKIAGVLDDGATKIG-VESTVIDLST-PQAAI 188
Query: 207 LRPGSAKEETI-AIL 220
LRPG E I AIL
Sbjct: 189 LRPGKITAEQIEAIL 203
>gi|420162126|ref|ZP_14668886.1| SUA5 family translation factor [Weissella koreensis KCTC 3621]
gi|394744560|gb|EJF33502.1| SUA5 family translation factor [Weissella koreensis KCTC 3621]
Length = 343
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 110/195 (56%), Gaps = 5/195 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A++AL+ G++++ PT+T+YG DA + +AV+++Y KGR +PL + V +
Sbjct: 12 EPAVKALQKGQLVSFPTETVYGLGADAFNEKAVSKVYAAKGRPSDNPLIVHVSRPETVQT 71
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+A D L+D+ PGP+T++L + L + GL+++ R+PD++ R + +
Sbjct: 72 YAQVDARAQKLMDTFWPGPLTIILPI-QVGKLSALVTGGLQTVASRMPDNDLTRALIDQV 130
Query: 148 ESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
S L SAN +G+PS +++ + +L + A V D G G STV+DL+ + I
Sbjct: 131 GSPLVGPSANTSGKPSPTIANHVYHDLHGKIAGVLDDGATKIG-VESTVIDLST-PQAAI 188
Query: 207 LRPGSAKEETI-AIL 220
LRPG E I AIL
Sbjct: 189 LRPGKITAEQIEAIL 203
>gi|329889534|ref|ZP_08267877.1| SUA5 domain protein [Brevundimonas diminuta ATCC 11568]
gi|328844835|gb|EGF94399.1| SUA5 domain protein [Brevundimonas diminuta ATCC 11568]
Length = 312
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 100/199 (50%), Gaps = 3/199 (1%)
Query: 20 RPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICV 79
RPA E A +ALKTG+++ +PT+T+YG A DA + +AV RI+E KGR +PL V
Sbjct: 5 RPARGDSPEIAAEALKTGRLVILPTETVYGLAADASNPQAVARIFEAKGRPRFNPLIAHV 64
Query: 80 GDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
+ D AV D L ++ PGP+T+V + + GL+S+ VRVP
Sbjct: 65 ANAVDAEAIAVFDAKARALAEAFWPGPLTIVAPVRDRERVCDLARAGLDSVAVRVPGHPR 124
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDL 198
R + + SAN +G+PS + D E + DGG G STVV +
Sbjct: 125 ARAVIGAFGGPVVAPSANRSGRPSPTTFGDALEETGQAVGAAVDGGPCAVG-VESTVVSV 183
Query: 199 TRLGKFKILRPGSAKEETI 217
G+ +LRPGS E I
Sbjct: 184 LD-GQVALLRPGSVTREEI 201
>gi|340355726|ref|ZP_08678402.1| Sua5/YciO/YrdC/YwlC family protein [Sporosarcina newyorkensis 2681]
gi|339622134|gb|EGQ26665.1| Sua5/YciO/YrdC/YwlC family protein [Sporosarcina newyorkensis 2681]
Length = 343
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 110/195 (56%), Gaps = 5/195 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A+ LK+G ++A PT+T+YG A +AV +I+E KGR +PL + +G SD+ R
Sbjct: 19 EQAVDILKSGGLVAFPTETVYGLGAVATDEQAVRKIFEAKGRPADNPLIVHIGRQSDMER 78
Query: 88 F-AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
F A + L+++ PGP+T+V+ + + + +++ G+E++ +R+PD + +
Sbjct: 79 FVARVPEVAAQLIEAFWPGPLTLVMEK-KPGVIAETVTAGMETVAIRMPDHPVALQLLQK 137
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
LE LA SAN +G+PS + + +L + + DGG G STV+D+T
Sbjct: 138 LELPLAAPSANRSGKPSPTEAEHVYHDLLGKIPLILDGGATGIG-VESTVLDITVTPPV- 195
Query: 206 ILRPGSAKEETIAIL 220
ILRPG +E + L
Sbjct: 196 ILRPGGIVKEQLEAL 210
>gi|448582657|ref|ZP_21646161.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax gibbonsii ATCC 33959]
gi|445732305|gb|ELZ83888.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax gibbonsii ATCC 33959]
Length = 200
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A++ G+ + PT+T+YG DA +++AV R+++IKGR PL+ DV
Sbjct: 7 QRAADAIRRGEAVVYPTETVYGMGADATNADAVERVFDIKGRDRDKPLSAGFPDVDAALE 66
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
V D + LPGPVTVV+ R +S L +L G E +GVRVPD + R
Sbjct: 67 HVVADEREEAFMRRFLPGPVTVVVERRDS--LPDALVAGKERVGVRVPDHELALDLFRAA 124
Query: 148 ESALALTSANLTG-----QPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ + TSAN +G PS +S + + E A V DGG P STVVD G
Sbjct: 125 GTPVTATSANRSGTGSITHPSQLS----DEIREAVAVVLDGGTTPGTE--STVVD---PG 175
Query: 203 KFKILRPGSAKEETIAILEKHS 224
+ + R G+ ++ A L++H
Sbjct: 176 RGVVHRRGAMADDIEAWLDEHD 197
>gi|341892431|gb|EGT48366.1| hypothetical protein CAEBREN_20292 [Caenorhabditis brenneri]
Length = 219
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 7/203 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E + A+ G ++A+PTDTLYG + S+ R+Y +K R PL I + +
Sbjct: 15 EEAIDTAVSVFLRGGIVALPTDTLYGISTLLPYSD---RLYALKQRPFEKPLGIFLPSPT 71
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ + + L + LLPGPVT++ R + L NPG+ ++ RVPD V I
Sbjct: 72 SM-KLVSKQTISDELANCLLPGPVTLMFERLPT--LPAEFNPGVLNVACRVPDCPIVSRI 128
Query: 144 ARGLESALALTSANLTGQP-SSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
R L LA TSAN++G P + S+ F+NL + D G + S GST+VDLT
Sbjct: 129 CRKLGQPLAQTSANVSGSPLNPTSIDHFKNLHSNIDLILDNGRIISSGEGSTIVDLTVES 188
Query: 203 KFKILRPGSAKEETIAILEKHSL 225
++I+R G A+++T+ L+ L
Sbjct: 189 SYRIIRSGCAEKDTVEKLKMFGL 211
>gi|172058702|ref|YP_001815162.1| Sua5/YciO/YrdC/YwlC family protein [Exiguobacterium sibiricum
255-15]
gi|171991223|gb|ACB62145.1| Sua5/YciO/YrdC/YwlC family protein [Exiguobacterium sibiricum
255-15]
Length = 332
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 106/195 (54%), Gaps = 12/195 (6%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA++ L+ G+V+A+PT+T+YG A DA S AV RI+ KGR +PL + V V +
Sbjct: 12 KEAVRLLQEGEVVAIPTETVYGLAGDATSETAVRRIFAAKGRPSDNPLIVHVASVEQAKQ 71
Query: 88 FAVTDHLPH---GLLDSLLPGPVTVVL-SRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
F H+P L+D+ PG +T++L S G +S+L + GL++IG+R+PD +
Sbjct: 72 FVT--HIPDVAAQLMDTFWPGALTIILESNGRASSL---VTAGLDTIGLRMPDHPLALQL 126
Query: 144 ARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
LA SAN +G+PS S +L R A + DGG G STV+D T
Sbjct: 127 IEATGLGLAAPSANRSGKPSPTSSAHVAHDLSGRIAAIVDGGETGIG-VESTVIDCT-TN 184
Query: 203 KFKILRPGSAKEETI 217
ILRPG E I
Sbjct: 185 PPVILRPGGVTREQI 199
>gi|406917078|gb|EKD55941.1| hypothetical protein ACD_58C00330G0002 [uncultured bacterium]
Length = 202
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 98/190 (51%), Gaps = 12/190 (6%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+E ++ L+ G VI PTDT YG D + A+ +IY IKGR++ PL++ + D+ + +
Sbjct: 17 DETVETLRHGGVIIYPTDTCYGIGADMTNIFALEKIYRIKGREYRKPLSMIIKDIEQLEK 76
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+A+ + +L + LPGP T +L L +S SIG+R+PD ++IA GL
Sbjct: 77 YALVESENKSILSNYLPGPFTFILLNINYQILRQS------SIGIRMPDYKITQLIANGL 130
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWE----RCACVYDGGVLPSGRAGSTVVDLTRLGK 203
A TSAN +G SV N E + D G LP STVVDLT K
Sbjct: 131 HRPFATTSANKSGFNPCYSVSCILNQIEGEKYLPNLILDAGDLPKN-PPSTVVDLTD-NK 188
Query: 204 FKILRPGSAK 213
++LR G K
Sbjct: 189 PRVLRQGGVK 198
>gi|15964621|ref|NP_384974.1| hypothetical protein SMc00984 [Sinorhizobium meliloti 1021]
gi|334315332|ref|YP_004547951.1| Sua5/YciO/YrdC/YwlC family protein [Sinorhizobium meliloti AK83]
gi|384528578|ref|YP_005712666.1| Sua5/YciO/YrdC/YwlC family protein [Sinorhizobium meliloti BL225C]
gi|384534980|ref|YP_005719065.1| hypothetical protein SM11_chr0523 [Sinorhizobium meliloti SM11]
gi|433612634|ref|YP_007189432.1| Sua5/YciO/YrdC/YwlC family protein [Sinorhizobium meliloti GR4]
gi|15073799|emb|CAC45440.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|333810754|gb|AEG03423.1| Sua5/YciO/YrdC/YwlC family protein [Sinorhizobium meliloti BL225C]
gi|334094326|gb|AEG52337.1| Sua5/YciO/YrdC/YwlC family protein [Sinorhizobium meliloti AK83]
gi|336031872|gb|AEH77804.1| Hypothetical protein SM11_chr0523 [Sinorhizobium meliloti SM11]
gi|429550824|gb|AGA05833.1| Sua5/YciO/YrdC/YwlC family protein [Sinorhizobium meliloti GR4]
Length = 324
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 110/206 (53%), Gaps = 4/206 (1%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A L G+ +A+PT+T+YG A DA + +A++RIYE+KGR +PL V D++
Sbjct: 16 EKACAVLSDGEPVAIPTETVYGLAADATTPDAISRIYEMKGRPRFNPLICHVCDLAMAEA 75
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
D + L ++ PGP+T++L + S + + GL+++G+R+PD RVIAR
Sbjct: 76 HVTFDPVSRRLAEAFWPGPLTLILPQRRESTVHTLASAGLDTLGIRMPDGFSRRVIAR-F 134
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G+ S S + +L R + D G G ST+V + G+ ++
Sbjct: 135 GRPLAAPSANTSGKISPTSAAHVQADLGSRLKLILDAGPAAIGLE-STIVKVEN-GRLRL 192
Query: 207 LRPGSAKEETIAILEKHSLVEEPAAG 232
LRPG I L ++ AAG
Sbjct: 193 LRPGGLDAAEIEALTGLAIERPEAAG 218
>gi|387928391|ref|ZP_10131069.1| sua5/yciO/yrdC/ywlC family protein [Bacillus methanolicus PB1]
gi|387587977|gb|EIJ80299.1| sua5/yciO/yrdC/ywlC family protein [Bacillus methanolicus PB1]
Length = 352
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 111/194 (57%), Gaps = 11/194 (5%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A LK +VIA PT+T+YG +A S EAV +I+E KGR +PL I + ++S +NRF
Sbjct: 23 QAADLLKKNEVIAFPTETVYGLGGNAESDEAVQKIFEAKGRPSDNPLIIHIAEISQLNRF 82
Query: 89 AVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
A ++P L+++ PGP+T+VL++ + EK+ GL ++ VR+PD + +
Sbjct: 83 A--KNIPENAKILMETFWPGPLTLVLNKRDGFLSEKA-TAGLSTVAVRMPDHPVALAVIK 139
Query: 146 GLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGK 203
+A SAN +G+PS + K ++L R A + DGG P+G STV+D T
Sbjct: 140 ESGLPIAAPSANRSGKPSPTTAKHVADDLDGRIAGIVDGG--PTGVGVESTVLDCTEPVP 197
Query: 204 FKILRPGSAKEETI 217
ILRPG +E I
Sbjct: 198 V-ILRPGGITKEQI 210
>gi|418403381|ref|ZP_12976872.1| Sua5/YciO/YrdC/YwlC family protein [Sinorhizobium meliloti
CCNWSX0020]
gi|359502688|gb|EHK75259.1| Sua5/YciO/YrdC/YwlC family protein [Sinorhizobium meliloti
CCNWSX0020]
Length = 324
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 110/206 (53%), Gaps = 4/206 (1%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A L G+ +A+PT+T+YG A DA + +A++RIYE+KGR +PL V D++
Sbjct: 16 EKACAVLSDGEPVAIPTETVYGLAADATTPDAISRIYEMKGRPRFNPLICHVCDLAMAEA 75
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
D + L ++ PGP+T++L + S + + GL+++G+R+PD RVIAR
Sbjct: 76 HVTFDPVSRRLAEAFWPGPLTLILPQRRESTVHTLASAGLDTLGIRMPDGFSRRVIAR-F 134
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G+ S S + +L R + D G G ST+V + G+ ++
Sbjct: 135 GRPLAAPSANTSGKISPTSAAHVQADLGSRLKLILDAGPAAIGLE-STIVKVEN-GRLRL 192
Query: 207 LRPGSAKEETIAILEKHSLVEEPAAG 232
LRPG I L ++ AAG
Sbjct: 193 LRPGGLDAAEIEALTGLAIERPEAAG 218
>gi|288931240|ref|YP_003435300.1| Sua5/YciO/YrdC/YwlC family protein [Ferroglobus placidus DSM 10642]
gi|288893488|gb|ADC65025.1| Sua5/YciO/YrdC/YwlC family protein [Ferroglobus placidus DSM 10642]
Length = 334
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 104/189 (55%), Gaps = 6/189 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + +K G ++A PT+T+YG DA + +AV +I+E+KGR +PL + V V I A
Sbjct: 23 AAEEIKKGNLVAFPTETVYGLGADALNEKAVRKIFEVKGRPADNPLIVHVSSVDQIYEIA 82
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ + L+D+ PGP+T+V+ ++ + K GL+++ VR+PD + E+
Sbjct: 83 QPNEIAKKLIDAFFPGPLTLVM---KNKKVPKITTAGLDTVAVRMPDHKVALKLIELSET 139
Query: 150 ALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
+A SAN +G+PS + E+L + DGG G STVVD T + +ILR
Sbjct: 140 PIAAPSANKSGKPSPTKAEHVLEDLGNLVDVIIDGGETKIGLE-STVVDTT-VYPVEILR 197
Query: 209 PGSAKEETI 217
PG+ +E +
Sbjct: 198 PGAITKEEL 206
>gi|297585438|ref|YP_003701218.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus selenitireducens
MLS10]
gi|297143895|gb|ADI00653.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus selenitireducens
MLS10]
Length = 352
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 110/204 (53%), Gaps = 12/204 (5%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA + ++ G+V+A PT+T+YG DA S EA+ RI+E KGR +PL + V + D R+
Sbjct: 29 EAAELIRNGEVVAFPTETVYGLGGDATSDEAIRRIFEAKGRPADNPLIVHVASIEDAARW 88
Query: 89 AVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
+T LP L+ + PGP+T+VL + L ++ GL ++G+R+PD +
Sbjct: 89 TLT--LPKTAKDLMAAFWPGPLTIVLP--HNGTLSGAVTAGLPTVGLRMPDHPVALRLIE 144
Query: 146 GLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGK 203
LA S N +G+PS E+L R + DGG P+G STVV++T G+
Sbjct: 145 ASGRPLAAPSGNRSGRPSPTEAAHVEEDLNGRIPMILDGG--PAGVGLESTVVEVTD-GQ 201
Query: 204 FKILRPGSAKEETIAILEKHSLVE 227
+LRPG E + + +H ++
Sbjct: 202 VTVLRPGGVTLEALREVAEHVAID 225
>gi|429736923|ref|ZP_19270798.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas sp. oral taxon 138
str. F0429]
gi|429153705|gb|EKX96478.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas sp. oral taxon 138
str. F0429]
Length = 350
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 113/214 (52%), Gaps = 9/214 (4%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++RP ++A E +++G ++A PT+T+YG + + A RIYE KGR +PL +
Sbjct: 5 ILRPISDADFERVAALIRSGALVAFPTETVYGLGANGLDAAACARIYEAKGRPSDNPLIL 64
Query: 78 CVGDVSDINRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPD 136
+ D++ + A L LL + PGP+TV+L + + ++ + GL ++GVR PD
Sbjct: 65 HIADLAMAHDVASEVPSLAAHLLTAFAPGPLTVILPK--APHIPDIVTGGLSTVGVRCPD 122
Query: 137 SNFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAG--S 193
+ R + R +A SAN +G+PS + + + ++ R + DGG S R G S
Sbjct: 123 HDIARRLIRAAGVPIAAPSANTSGRPSPTTAAMVYADMAGRIPLILDGG---SCRLGVES 179
Query: 194 TVVDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
T+VD T G ILRPG+ E + H+ V
Sbjct: 180 TIVDCTEEGVVTILRPGAITREMMVAELPHADVR 213
>gi|407719731|ref|YP_006839393.1| hypothetical protein BN406_00522 [Sinorhizobium meliloti Rm41]
gi|407317963|emb|CCM66567.1| hypothetical protein BN406_00522 [Sinorhizobium meliloti Rm41]
Length = 324
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 110/206 (53%), Gaps = 4/206 (1%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A L G+ +A+PT+T+YG A DA + +A++RIYE+KGR +PL V D++
Sbjct: 16 EKACAVLSDGEPVAIPTETVYGLAADATTPDAISRIYEMKGRPRFNPLICHVCDLAMAEA 75
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
D + L ++ PGP+T++L + S + + GL+++G+R+PD RVIAR
Sbjct: 76 HVTFDPVSRRLAEAFWPGPLTLILPQRRESTVHTLASAGLDTLGIRMPDGFSRRVIAR-F 134
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G+ S S + +L R + D G G ST+V + G+ ++
Sbjct: 135 GRPLAAPSANTSGKISPTSAAHVQADLGSRLKLILDAGPAAIGLE-STIVKVEN-GRLRL 192
Query: 207 LRPGSAKEETIAILEKHSLVEEPAAG 232
LRPG I L ++ AAG
Sbjct: 193 LRPGGLDAAEIEALTGLAIERPEAAG 218
>gi|337270100|ref|YP_004614155.1| Sua5/YciO/YrdC/YwlC family protein [Mesorhizobium opportunistum
WSM2075]
gi|336030410|gb|AEH90061.1| Sua5/YciO/YrdC/YwlC family protein [Mesorhizobium opportunistum
WSM2075]
Length = 324
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A+ L+ G V+A+PT+T+YG A DA + V RI+E KGR +PL V D++ R
Sbjct: 12 ERALALLQGGDVVAIPTETVYGLAGDATNGIGVARIFEAKGRPRFNPLIAHVADMAMAER 71
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A+ D L L + PGP+T+VL + + + + GL++I +R+P +IAR L
Sbjct: 72 IALFDPLSKKLAIAFWPGPLTLVLPQRPGNGIHPLVTAGLDTIALRMPRGFGGDLIAR-L 130
Query: 148 ESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G+ S+ + + +L R V DGG P G ST+V G+ ++
Sbjct: 131 GRPLAAPSANSSGKISATTAQAVAADLGARIRLVVDGGATPVGLE-STIVK-AEAGRLRL 188
Query: 207 LRPGSAKEETI 217
LRPG E I
Sbjct: 189 LRPGGIAAEDI 199
>gi|393202115|ref|YP_006463957.1| putative translation factor [Solibacillus silvestris StLB046]
gi|327441446|dbj|BAK17811.1| putative translation factor [Solibacillus silvestris StLB046]
Length = 343
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A+ L G+++A PT+T+YG A + +AV +I+ KGR +PL + +G V +++ +
Sbjct: 20 QAVDLLNNGEIVAFPTETVYGLGAVATNEQAVKKIFAAKGRPSDNPLIVHIGTVEEVSLY 79
Query: 89 AVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ +++ PGP+T+V+ + + L S+ GL+++G+R+PD + + L
Sbjct: 80 TTNISEVAQNCMEAFWPGPLTLVMDV-KPNVLAPSVTAGLDTVGIRMPDHPVALELLQTL 138
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ LA SAN +G+PS + FE+L C+ DGGV G STV+D+T L I
Sbjct: 139 KKPLAAPSANRSGKPSPTKAEHVFEDLQNIIPCILDGGVTGIGLE-STVLDVT-LDTPVI 196
Query: 207 LRPGSAKEETI 217
LRPG +E +
Sbjct: 197 LRPGGVTKEML 207
>gi|240850071|ref|YP_002971464.1| translation factor, Sua5/YciO/YrdC family [Bartonella grahamii
as4aup]
gi|240267194|gb|ACS50782.1| translation factor, Sua5/YciO/YrdC family [Bartonella grahamii
as4aup]
Length = 320
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 102/200 (51%), Gaps = 4/200 (2%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P A EAI L+ GK++A+PT+T+YG A DA + A++ I+ KGR +PL
Sbjct: 3 ILPLNSASIREAIALLEQGKLVALPTETVYGLAGDATNGRAISSIFSTKGRPQINPLIAH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + R+ D L L++ PGP+T+VL E N+ GL ++ VR PDS
Sbjct: 63 VSGIEMAERYVKIDFLSRQLMEEFWPGPLTLVLPLKEQHNIHPLTTSGLNTLAVRFPDSL 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F V+ + LA SAN +G+ S S + F +L E + DGG G ST++
Sbjct: 123 FAEVV-QHFGRPLAAPSANQSGRLSPTSAEAVFASLGESVPLILDGGPAKIGLE-STIIK 180
Query: 198 LTRLGKFKILRPGSAKEETI 217
+ + +LRPG + I
Sbjct: 181 ICDENIY-LLRPGGLAADKI 199
>gi|227821062|ref|YP_002825032.1| Sua5 family protein [Sinorhizobium fredii NGR234]
gi|227340061|gb|ACP24279.1| Sua5 family protein [Sinorhizobium fredii NGR234]
Length = 324
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 4/206 (1%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A AL G+ +A+PT+T+YG A DA +++A++RIYE+KGR +PL V D++
Sbjct: 16 EKACAALSEGEPVAIPTETVYGLAADATNADAISRIYEMKGRPRFNPLICHVSDMAMAEA 75
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
V D L L ++ PGP+T++L S + + GLE++G+R+P+ RVI+
Sbjct: 76 HVVFDPLSRRLAEAFWPGPLTLILPERRESTVHALASAGLETLGIRMPEGFSRRVISH-F 134
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G+ S S E +L + + D G G ST++ + G+ ++
Sbjct: 135 GRPLAAPSANTSGKISPTSAAHVEADLGAKLGLILDAGPAEIGLE-STIIKV-EAGRLRL 192
Query: 207 LRPGSAKEETIAILEKHSLVEEPAAG 232
LRPG I L ++ AAG
Sbjct: 193 LRPGGLDAAEIEALTGLTVGRPEAAG 218
>gi|401565268|ref|ZP_10806114.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Selenomonas sp. FOBRC6]
gi|400188010|gb|EJO22193.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Selenomonas sp. FOBRC6]
Length = 350
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 113/214 (52%), Gaps = 9/214 (4%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++RP ++A E A L++G ++A PT+T+YG + + A RIYE KGR +PL +
Sbjct: 5 ILRPISDADFERAAALLRSGALVAFPTETVYGLGANGLDAAACARIYEAKGRPSDNPLIL 64
Query: 78 CVGDVSDINRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPD 136
+ D++ + A L LL + PGP+TV+L + + ++ + GL ++GVR PD
Sbjct: 65 HIADLAMAHDVAADVPPLAAHLLTAFAPGPLTVILPK--APHIPDIVTGGLPTVGVRCPD 122
Query: 137 SNFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAG--S 193
+ R + R +A SAN +G+PS + + + ++ R + DGG S R G S
Sbjct: 123 HDTARRLIRATGVPIAAPSANTSGRPSPTTAAMVYADMAGRIPLILDGG---SCRLGVES 179
Query: 194 TVVDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
T+VD T ILRPG+ E + H+ V
Sbjct: 180 TIVDCTEESVVTILRPGAITREMMVAELPHADVR 213
>gi|260789486|ref|XP_002589777.1| hypothetical protein BRAFLDRAFT_90450 [Branchiostoma floridae]
gi|229274960|gb|EEN45788.1| hypothetical protein BRAFLDRAFT_90450 [Branchiostoma floridae]
Length = 145
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 85/134 (63%), Gaps = 6/134 (4%)
Query: 98 LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSAN 157
LL LLPGPVTVV+ R ++ L +LNP + +G+RVP F+R +A +ALTSAN
Sbjct: 3 LLQDLLPGPVTVVMQR--TAALNTNLNPSTDLVGIRVPQHKFMRQLAETCMEPIALTSAN 60
Query: 158 LTGQPSSVSVKDFENLWERCACVYDGGVLPSGRA---GSTVVDLTRLGKFKILRPGSAKE 214
+ +++ +++FENLW + V DGG L S +A GSTVVDL+ G+F++LR G A
Sbjct: 61 TSAAGNTIDIQEFENLWPQLDLVLDGGRLESTQAVREGSTVVDLSVEGQFRVLRVGCAYM 120
Query: 215 ETIAIL-EKHSLVE 227
T+ +L K+ L +
Sbjct: 121 STVDVLANKYDLTD 134
>gi|448560642|ref|ZP_21634090.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax prahovense DSM 18310]
gi|445722292|gb|ELZ73955.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax prahovense DSM 18310]
Length = 200
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A +++ G+ + PT+T+YG DA +++AV R+++IKGR PL+ DV
Sbjct: 7 QRAAASIRRGEAVVYPTETVYGMGADATNADAVERVFDIKGRDRDKPLSAGFPDVDAALE 66
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
V D + LPGPVTVV+ R +S L +L G E +GVRVPD + R
Sbjct: 67 HVVADDREEAFMRRFLPGPVTVVVERRDS--LPDALVAGKERVGVRVPDHELALALFRAS 124
Query: 148 ESALALTSANLTG-----QPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ + TSAN +G PS +S + + E A V DGG P STVVD G
Sbjct: 125 GTPVTATSANRSGTGSITHPSQLS----DEIREAVAVVLDGGTTPGTE--STVVD---PG 175
Query: 203 KFKILRPGSAKEETIAILEKHS 224
+ + R G+ ++ A L++H+
Sbjct: 176 RGVVHRRGAMADDIEAWLDEHA 197
>gi|407975827|ref|ZP_11156730.1| Sua5/YciO/YrdC/YwlC family protein [Nitratireductor indicus C115]
gi|407428688|gb|EKF41369.1| Sua5/YciO/YrdC/YwlC family protein [Nitratireductor indicus C115]
Length = 318
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 102/189 (53%), Gaps = 4/189 (2%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L G V+A+PT+T+YG A DA + EAV RIYE KGR +PL V D++ RFA
Sbjct: 14 AVALLDAGAVVAMPTETVYGLAADATNGEAVARIYETKGRPRFNPLIAHVCDMAMAERFA 73
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ L L ++ PGP+T+VL + S + + GL++I +R P R IA L
Sbjct: 74 EFNALARRLAEAFWPGPLTMVLPQKPQSGVSPLVTAGLDTIALRWPRGFCARAIAE-LGR 132
Query: 150 ALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
+A SAN +G+ S+ + + + +L R + D G P G ST+V + G +LR
Sbjct: 133 PVAAPSANSSGRVSTTTAEAVDADLGSRIELIVDAGATPVG-VESTIVKVDGNG-LTLLR 190
Query: 209 PGSAKEETI 217
PG E I
Sbjct: 191 PGGVAAEDI 199
>gi|408357418|ref|YP_006845949.1| hypothetical protein AXY_20550 [Amphibacillus xylanus NBRC 15112]
gi|407728189|dbj|BAM48187.1| hypothetical protein AXY_20550 [Amphibacillus xylanus NBRC 15112]
Length = 341
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 113/198 (57%), Gaps = 10/198 (5%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E ++ + +++G+V+A PT+T+YG DA + EAV +I+ KGR +PL + V +
Sbjct: 12 EQATDQLSKYIRSGEVVAFPTETVYGLGADATNPEAVKKIFLAKGRPSDNPLIVHVASIE 71
Query: 84 DINRFAVTDHLPHG--LLDSLLPGPVTVVL-SRGESSNLEKSLNPGLESIGVRVPDSNFV 140
I + VT+ P L+ + +PGP+TVVL S G+ S+ + GL+++GVR+PD
Sbjct: 72 QIESY-VTEISPAARRLIQAFMPGPLTVVLPSNGKISD---QVTAGLDTVGVRIPDHPAA 127
Query: 141 RVIARGLESALALTSANLTGQPSSVS-VKDFENLWERCACVYDGGVLPSGRAGSTVVDLT 199
+ + + +A SANL+G+PS S + F++L + + DGG G STVVD T
Sbjct: 128 QELIQKANVPIAAPSANLSGKPSPTSAIHVFQDLNGKIKAILDGGTTGVGLE-STVVDCT 186
Query: 200 RLGKFKILRPGSAKEETI 217
K +I+RPG + I
Sbjct: 187 G-EKPEIIRPGGVTQMEI 203
>gi|433449026|ref|ZP_20411891.1| translation factor SUA5 [Weissella ceti NC36]
gi|429539415|gb|ELA07452.1| translation factor SUA5 [Weissella ceti NC36]
Length = 338
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 113/197 (57%), Gaps = 4/197 (2%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T + A+ A++ G++++ P++T+YG +A + +AV ++Y KGR +PL + V D+
Sbjct: 7 TSSELSAAVSAIQAGQLVSFPSETVYGLGANAFNEQAVQQVYAAKGRPSDNPLIVHVADI 66
Query: 83 SDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ + FA+T+ L+ + PGP+T++L + L +++ GL+++ +R+PD++ R
Sbjct: 67 AQVTDFALTNAWADTLMATFWPGPLTMILPV-KPDALSETVTGGLDTVAIRMPDNDVTRQ 125
Query: 143 IARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ R L SAN +G+PS +++ + +L + A V D G G ST++DL+
Sbjct: 126 LIRDAGVPLVGPSANTSGRPSPTLAAHVYHDLQGKIAGVVDDGATMIG-VESTIIDLST- 183
Query: 202 GKFKILRPGSAKEETIA 218
+ +LRPG E +A
Sbjct: 184 EQPTVLRPGKITPEELA 200
>gi|150395706|ref|YP_001326173.1| Sua5/YciO/YrdC/YwlC family protein [Sinorhizobium medicae WSM419]
gi|150027221|gb|ABR59338.1| Sua5/YciO/YrdC/YwlC family protein [Sinorhizobium medicae WSM419]
Length = 324
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 4/184 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A L + +A+PT+T+YG A DA +S+A++RIYE+KGR +PL V D++
Sbjct: 16 ETACAVLSDAEPVAIPTETVYGLAADATTSDAISRIYEMKGRPRFNPLICHVSDLAMAEA 75
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
D L L ++ PGP+T++L + S + + GL+++G+R+PD RVIAR
Sbjct: 76 HVTFDPLSRRLAEAFWPGPLTLILPQRHESTVHTLASAGLDTLGIRMPDGFSRRVIAR-F 134
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G+ S S + +L R + D G G ST+V + G ++
Sbjct: 135 GRPLAAPSANTSGKISPTSAAHVQGDLGPRLKLILDAGPAAIGLE-STIVKVDN-GALRL 192
Query: 207 LRPG 210
LRPG
Sbjct: 193 LRPG 196
>gi|114569382|ref|YP_756062.1| translation factor SUA5 [Maricaulis maris MCS10]
gi|114339844|gb|ABI65124.1| translation factor SUA5 [Maricaulis maris MCS10]
Length = 327
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
Query: 14 NKAGLVRPATE-AHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHT 72
+K ++PA++ A EEA+ LK G ++A+PT+T+YG A DA +++AV R+Y KGR
Sbjct: 10 SKPAPIKPASDPAVIEEAVAILKAGGLVAMPTETVYGLAADAGNADAVARLYAAKGRPRF 69
Query: 73 SPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGV 132
+PL V + R A L L +S PGP+T+VL + + + N GL+SI +
Sbjct: 70 NPLIAHVAGPNMAWRLAGWPDLADQLAESFWPGPLTLVLPKRPDAPIADIANAGLDSIAL 129
Query: 133 RVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRA 191
R P + + R + L SAN +G S + E L +R + DGG P G
Sbjct: 130 RAPRHAAAQALIRAFDGPLVAPSANPSGAVSPTTAAHVAEGLGDRIDLILDGGACPVGLE 189
Query: 192 GSTVVDLTRLGKFKILRPGSAKEETI 217
STV+ L G +LRPG I
Sbjct: 190 -STVIALLG-GTPTLLRPGGLARRQI 213
>gi|415883774|ref|ZP_11545803.1| sua5/yciO/yrdC/ywlC family protein [Bacillus methanolicus MGA3]
gi|387591569|gb|EIJ83886.1| sua5/yciO/yrdC/ywlC family protein [Bacillus methanolicus MGA3]
Length = 346
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 109/193 (56%), Gaps = 9/193 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A LK +VIA PT+T+YG +A S EAV +I+E KGR +PL I + ++ +N+F
Sbjct: 23 QAASLLKQNEVIAFPTETVYGLGGNAESDEAVQKIFEAKGRPSDNPLIIHIAEIKQLNQF 82
Query: 89 A--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A + DH L+++ PGP+T+VL++ + L + GL ++ VR+PD + +
Sbjct: 83 AENIPDHA-KILMETFWPGPLTLVLNK-RAGFLSEKATAGLSTVAVRMPDHPVALAVIKE 140
Query: 147 LESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGKF 204
+A SAN +G+PS + K ++L R A + DGG P+G STV+D T
Sbjct: 141 SGLPIAAPSANRSGKPSPTTAKHVADDLHGRIAGIVDGG--PTGVGVESTVLDCTEPVPV 198
Query: 205 KILRPGSAKEETI 217
ILRPG +E I
Sbjct: 199 -ILRPGGITKEQI 210
>gi|374292863|ref|YP_005039898.1| putative translation factor (Sua5-like) [Azospirillum lipoferum 4B]
gi|357424802|emb|CBS87681.1| putative translation factor (Sua5-like) [Azospirillum lipoferum 4B]
Length = 331
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 4/200 (2%)
Query: 13 ENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHT 72
E + L+ PAT A A + L+ G+++A PT+T+YG DA AV I+ KGR
Sbjct: 11 EKRPALI-PATPAGLNRAAELLRAGRLVAFPTETVYGLGADATDDRAVAAIFAAKGRPQF 69
Query: 73 SPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGV 132
+PL + V D++ + + + D H L PGP+T+V+ R +S L ++ GL+SI +
Sbjct: 70 NPLIVHVPDLAAAHSWGLFDDRAHDLATQFWPGPLTMVVPRPANSALSLLVSAGLDSIAI 129
Query: 133 RVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA 191
RVP+ + I R +A SAN +G S + + E+L +R + GG G
Sbjct: 130 RVPNHPVAQAILRAAGKPIAAPSANCSGAVSPTTPQHVLESLGDRVDAIVTGGKCMVGLE 189
Query: 192 GSTVVDLTRLGKFKILRPGS 211
STV+DLT + +LRPG+
Sbjct: 190 -STVIDLTG-PEAVLLRPGA 207
>gi|395781805|ref|ZP_10462216.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella rattimassiliensis
15908]
gi|395420460|gb|EJF86736.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella rattimassiliensis
15908]
Length = 320
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 4/200 (2%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+RP +EAI L+ G ++A+PT+T+YG A DA + A++ I+ IK R +PL
Sbjct: 3 IRPLNNVSIKEAITLLEQGGLVALPTETVYGLAGDATNGRAISSIFSIKKRPQFNPLIAH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + R+ D L L++ PGP+T+VL E N+ GL ++ VR PDS
Sbjct: 63 VNGIEMAERYVEIDFLSRQLMEKFWPGPLTLVLPLKEQHNIHPLTTSGLNTLAVRFPDSR 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F ++ + L LA SAN +G+ S S + F +L + + + DGG G ST++
Sbjct: 123 FADIV-QYLGRPLAAPSANQSGRLSPTSAEAVFASLGKTVSLILDGGPSKIGLE-STIIR 180
Query: 198 LTRLGKFKILRPGSAKEETI 217
+ + +LRPG E I
Sbjct: 181 ICAENIY-LLRPGGLATEKI 199
>gi|420245096|ref|ZP_14748770.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium sp. CF080]
gi|398049341|gb|EJL41767.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium sp. CF080]
Length = 325
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 97/179 (54%), Gaps = 4/179 (2%)
Query: 40 IAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLL 99
+A+PT+T+YG A DA + A+ RIYE KGR +PL + D++ R+A D + L
Sbjct: 29 VAIPTETVYGLAADATNPAAITRIYETKGRPRFNPLICHMSDLAMAERYAEFDPISRTLA 88
Query: 100 DSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLT 159
++ PGP+T++L S + GL+++G+R+P F + R LA SAN +
Sbjct: 89 EAFWPGPLTLILPLKPESGIHALATAGLDTVGIRLP-KGFASELIRAFGKPLAAPSANTS 147
Query: 160 GQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETI 217
G+ S S ++L ++ A + DGG P G ST+V + G ++LRPG E I
Sbjct: 148 GKVSPTSAAHVADDLGDKLALIIDGGAAPVG-VESTIVRVED-GVIRLLRPGGVAAEEI 204
>gi|406665424|ref|ZP_11073197.1| t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN
[Bacillus isronensis B3W22]
gi|405386664|gb|EKB46090.1| t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN
[Bacillus isronensis B3W22]
Length = 343
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A+ L G+++A PT+T+YG A + +AV +I+ KGR +PL + +G V +++ +
Sbjct: 20 QAVDLLNNGEIVAFPTETVYGLGAVATNEQAVKKIFAAKGRPSDNPLIVHIGTVEEVSLY 79
Query: 89 AVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ +++ PGP+T+V+ + + L S+ GL+++G+R+PD + + L
Sbjct: 80 TTNISEVAQKCMEAFWPGPLTLVMDV-KPNVLAPSVTAGLDTVGIRMPDHPVALELLQTL 138
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ LA SAN +G+PS + FE+L C+ DGG+ G STV+D+T L I
Sbjct: 139 KKPLAAPSANRSGKPSPTKAEHVFEDLQNIIPCILDGGMTGIGLE-STVLDVT-LDTPVI 196
Query: 207 LRPGSAKEETI 217
LRPG +E +
Sbjct: 197 LRPGGVTKEML 207
>gi|76801361|ref|YP_326369.1| hypothetical protein NP1420A [Natronomonas pharaonis DSM 2160]
gi|76557226|emb|CAI48801.1| tRNA threonylcarbamoyladenosine biosynthesis protein YrdC
[Natronomonas pharaonis DSM 2160]
Length = 194
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 103/195 (52%), Gaps = 8/195 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A+ AL+ G ++ PT+T+YG A DA EAV R++E KGR P+++ + V+ +
Sbjct: 8 DAVAALRRGDLVVYPTETVYGLAADALDPEAVKRVFEAKGRDRDKPVSMALPSVAAAAEY 67
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
++ LPGPVTV+L RG+ + L G + +G+RVP + R +AR +
Sbjct: 68 VTFSDRERAFCEAFLPGPVTVLLERGD--RVPDVLVAGRDRVGLRVPAHDIARDLARRV- 124
Query: 149 SALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
+ TSAN++G PS+ + + A V DGG P STVVD + I+R
Sbjct: 125 GPITATSANVSGNPSARRPEAVDATIRERAVVVDGGETPGTE--STVVD---IAADDIVR 179
Query: 209 PGSAKEETIAILEKH 223
G+ ++ A L +H
Sbjct: 180 RGAQADDIDAWLTEH 194
>gi|448543843|ref|ZP_21625304.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax sp. ATCC BAA-646]
gi|445705985|gb|ELZ57872.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax sp. ATCC BAA-646]
Length = 199
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A++ G+ + PT+T+YG DA +++AV R+++IKGR +PL+ DV
Sbjct: 6 QRAAAAIRRGEAVVYPTETVYGMGADATNADAVERVFDIKGRDRNNPLSAGFPDVDAALE 65
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
F D + LPGPVTVV+ R +S L +L G + +GVR+PD + R
Sbjct: 66 FVEVDDREEAFMRRFLPGPVTVVVERRDS--LPDALVAGKDRVGVRIPDHELAVDLFRAA 123
Query: 148 ESALALTSANLTG-----QPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ + TSAN +G PS +S + + + A V DGG P STVVD G
Sbjct: 124 GTPVTATSANRSGTGSITHPSQLS----DEIRDAVAAVLDGGTTPGTE--STVVD---PG 174
Query: 203 KFKILRPGSAKEETIAILEKHS 224
+ + R G+ ++ A L++H
Sbjct: 175 RGVVHRRGAMADDIEAWLDEHD 196
>gi|238927404|ref|ZP_04659164.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas flueggei ATCC
43531]
gi|238884686|gb|EEQ48324.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas flueggei ATCC
43531]
Length = 350
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
P E A ++ G+++A PT+T+YG + + A RIYE KGR +PL + +
Sbjct: 8 PVLEKDIARAAALIRDGQLVAFPTETVYGLGANGLDAAACARIYEAKGRPSDNPLILHIA 67
Query: 81 DVSDINRF--AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
D+S +N AV H LL + PGP+TVV+ + + ++ + GL ++GVR P +
Sbjct: 68 DLSMLNETAEAVPSTAAH-LLTAFAPGPITVVVPK--AVHVPPLVTGGLSTVGVRCPAHD 124
Query: 139 FVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVD 197
R R +A SAN +G+PS + + + ++ R + DGG G ST+VD
Sbjct: 125 IARRFIRAAGVPIAAPSANTSGRPSPTAAAMVYADMAGRIPLILDGGSCSFG-VESTIVD 183
Query: 198 LTRLGKFKILRPGSAKEETIAILEKH 223
T G+ ILRPG+ E IA H
Sbjct: 184 CTEEGRVTILRPGAVTYEMIAAEFPH 209
>gi|448550915|ref|ZP_21629144.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax sp. ATCC BAA-645]
gi|448558690|ref|ZP_21633180.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax sp. ATCC BAA-644]
gi|445710860|gb|ELZ62656.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax sp. ATCC BAA-645]
gi|445712073|gb|ELZ63857.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax sp. ATCC BAA-644]
Length = 205
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A++ G+ + PT+T+YG DA +++AV R+++IKGR +PL+ DV
Sbjct: 12 QRAAAAIRRGEAVVYPTETVYGMGADATNADAVERVFDIKGRDRNNPLSAGFPDVDAALE 71
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
F D + LPGPVTVV+ R +S L +L G + +GVR+PD + R
Sbjct: 72 FVEVDDREEAFMRRFLPGPVTVVVERRDS--LPDALVAGKDRVGVRIPDHELAVDLFRAA 129
Query: 148 ESALALTSANLTG-----QPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ + TSAN +G PS +S + + + A V DGG P STVVD G
Sbjct: 130 GTPVTATSANRSGTGSITHPSQLS----DEIRDAVAAVLDGGTTPGTE--STVVD---PG 180
Query: 203 KFKILRPGSAKEETIAILEKHS 224
+ + R G+ ++ A L++H
Sbjct: 181 RGVVHRRGAMADDIEAWLDEHD 202
>gi|222100697|ref|YP_002535265.1| Translation factor SUA5 [Thermotoga neapolitana DSM 4359]
gi|221573087|gb|ACM23899.1| Translation factor SUA5 [Thermotoga neapolitana DSM 4359]
Length = 335
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 103/195 (52%), Gaps = 4/195 (2%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E EA LK G+V+ PT+T+YG DA + EA +I+EIKGR +PL + + S
Sbjct: 14 ERSLREAADLLKKGEVVVFPTETVYGIGADAYNEEACRKIFEIKGRPADNPLIVHICSFS 73
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ A L+ PGP+TV+L + +S + + GL ++ VR+P +
Sbjct: 74 QLEEVADGYESFRDFLERFWPGPLTVILPK-KSQRISDVVTAGLPTVAVRMPAHPVALKL 132
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
L +A SANL+G+PS+ SV+ E+ R + + D G P G ST++DL+R
Sbjct: 133 IEMLGDPIAAPSANLSGRPSATSVEHVVEDFMGRVSLILDAGNTPFG-LESTIIDLSR-E 190
Query: 203 KFKILRPGSAKEETI 217
K +LRPG + E +
Sbjct: 191 KPVLLRPGPVEVEKL 205
>gi|357025539|ref|ZP_09087660.1| Sua5/YciO/YrdC/YwlC family protein [Mesorhizobium amorphae
CCNWGS0123]
gi|355542574|gb|EHH11729.1| Sua5/YciO/YrdC/YwlC family protein [Mesorhizobium amorphae
CCNWGS0123]
Length = 321
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 110/206 (53%), Gaps = 4/206 (1%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A+ L+ G V+A+PT+T+YG A DA + V+RI+E KGR +PL V D++ R
Sbjct: 12 ERALALLEGGDVVAIPTETVYGLAADATNGIGVSRIFEAKGRPRFNPLIAHVADIAMAER 71
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
AV D L L ++ PGP+T+VL + + + + GL++I +R+P +IAR L
Sbjct: 72 IAVFDPLSKRLAEAFWPGPLTLVLPQRSGNGIHPLVTAGLDTIALRMPRGFGGELIAR-L 130
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G+ S+ + + +L + V DGG P G ST+V + ++
Sbjct: 131 GRPLAAPSANSSGRISATTAEAVATDLGAKIRLVVDGGATPVGLE-STIVKVEGE-DLRL 188
Query: 207 LRPGSAKEETIAILEKHSLVEEPAAG 232
LRPG I + L+ AAG
Sbjct: 189 LRPGGVAAGDIEAVAGIKLLRGMAAG 214
>gi|397489012|ref|XP_003815531.1| PREDICTED: yrdC domain-containing protein, mitochondrial [Pan
paniscus]
gi|10440179|dbj|BAB15668.1| unnamed protein product [Homo sapiens]
Length = 127
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 75/112 (66%), Gaps = 5/112 (4%)
Query: 116 SSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWE 175
S L K LNP +G+R+PD F++ +A+ E LALTSANL+ Q SS++V++F++LW
Sbjct: 4 SEELNKDLNPFTPLVGIRIPDHAFMQDLAQMFEGPLALTSANLSSQASSLNVEEFQDLWP 63
Query: 176 RCACVYDGGVL-----PSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEK 222
+ + V DGG + P R GSTVVDL+ GKF I+RPG A E T AIL++
Sbjct: 64 QLSLVIDGGQIGDGQSPECRLGSTVVDLSVPGKFGIIRPGCALESTTAILQQ 115
>gi|295099926|emb|CBK89015.1| Sua5/YciO/YrdC/YwlC family protein [Eubacterium cylindroides T2-87]
Length = 203
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 112/209 (53%), Gaps = 10/209 (4%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
++ T+ E +A K ++IA+PTDT+YG +A++ + K R T P+ +
Sbjct: 1 MKQYTQDQIHEVAKAFKDHEIIAIPTDTVYGVGVMYGDLDALHNLKHAKHRPETKPIPMM 60
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + + A+ D + LPG +T+VL L+KS N GLE+I +R+PD
Sbjct: 61 VSKLEQLEGIAIIDERTKVIAKHFLPGALTLVLPV--DPRLDKSYNNGLETIAIRIPDEE 118
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRA--GSTVV 196
FV + L++ L +TSAN +G P+++ +E++ E+ + DG VL RA ST+V
Sbjct: 119 FVLSLIDELDTPLLVTSANQSGAPTALK---YEDVLEQLPNI-DGIVLGKCRALQASTIV 174
Query: 197 DLTRLGKFKILRPGS-AKEETIAILEKHS 224
D T+ KILR G + EE + ++E S
Sbjct: 175 DCTK-EDLKILREGPISLEELVCVIENKS 202
>gi|297717892|gb|ADI50089.1| hypothetical protein [Candidatus Odyssella thessalonicensis L13]
Length = 310
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A + L +G V+A+PT+T+YG A DA + +AV +IY IK R +PL I +
Sbjct: 14 QACELLSSGDVVAIPTETVYGLAADATNDKAVAKIYAIKQRPEFNPLIIHCHSAQQAKSY 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
D L D+ PGP+T VL R S + + GLE++ VR+P + + +
Sbjct: 74 VQFDKRAEKLADAFWPGPITFVLKRYPDSAISFLASSGLETLAVRIPAHPVAQALIKAYS 133
Query: 149 SALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAG--STVVDLTRLGKFK 205
LA SANL+ S S D + +L R + DGG R G ST++DLT
Sbjct: 134 KPLAAPSANLSQTISPTSAIDVQASLGNRVPLIIDGG---QTRVGVESTIIDLTE-AIPH 189
Query: 206 ILRPGSAKEETI 217
ILRPG E I
Sbjct: 190 ILRPGGISVEQI 201
>gi|344924671|ref|ZP_08778132.1| Sua5/YciO/YrdC family protein [Candidatus Odyssella
thessalonicensis L13]
Length = 311
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A + L +G V+A+PT+T+YG A DA + +AV +IY IK R +PL I +
Sbjct: 14 QACELLSSGDVVAIPTETVYGLAADATNDKAVAKIYAIKQRPEFNPLIIHCHSAQQAKSY 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
D L D+ PGP+T VL R S + + GLE++ VR+P + + +
Sbjct: 74 VQFDKRAEKLADAFWPGPITFVLKRYPDSAISFLASSGLETLAVRIPAHPVAQALIKAYS 133
Query: 149 SALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAG--STVVDLTRLGKFK 205
LA SANL+ S S D + +L R + DGG R G ST++DLT
Sbjct: 134 KPLAAPSANLSQTISPTSAIDVQASLGNRVPLIIDGG---QTRVGVESTIIDLTE-AIPH 189
Query: 206 ILRPGSAKEETI 217
ILRPG E I
Sbjct: 190 ILRPGGISVEQI 201
>gi|448573384|ref|ZP_21640968.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax lucentense DSM 14919]
gi|445719149|gb|ELZ70832.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax lucentense DSM 14919]
Length = 198
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A++ G+ + PT+T+YG DA +++AV R+++IKGR +PL+ DV
Sbjct: 6 QRAAAAIRRGEAVVYPTETVYGMGADATNADAVERVFDIKGRDRDNPLSAGFPDVDAALE 65
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
F D + LPGPVTVV+ R +S L +L G + +GVR+PD + R
Sbjct: 66 FVEVDDREEAFMRRFLPGPVTVVVERRDS--LPDALVAGRDRVGVRIPDHELAVDLFRAA 123
Query: 148 ESALALTSANLTG-----QPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ + TSAN +G PS +S + + + A V DGG P STVVD G
Sbjct: 124 GTPVTATSANRSGTGSITHPSQLS----DEIRDAVAVVLDGGTTPGTE--STVVD---PG 174
Query: 203 KFKILRPGSAKEETIAILEKHS 224
+ + R G+ ++ A L++H
Sbjct: 175 RGVVHRRGAMADDIEAWLDEHD 196
>gi|433422919|ref|ZP_20406114.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax sp. BAB2207]
gi|432198501|gb|ELK54778.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax sp. BAB2207]
Length = 204
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A++ G+ + PT+T+YG DA +++AV R+++IKGR +PL+ DV
Sbjct: 12 QRAAAAIRRGEAVVYPTETVYGMGADATNADAVERVFDIKGRDRDNPLSAGFPDVDAALE 71
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
F D + LPGPVTVV+ R +S L +L G + +GVR+PD + R
Sbjct: 72 FVEVDDREEAFMRRFLPGPVTVVVERRDS--LPDALVAGKDRVGVRIPDHELAVDLFRAA 129
Query: 148 ESALALTSANLTG-----QPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ + TSAN +G PS +S + + + A V DGG P STVVD G
Sbjct: 130 GTPVTATSANRSGTGSITHPSQLS----DEIRDAVAVVLDGGTTPGTE--STVVD---PG 180
Query: 203 KFKILRPGSAKEETIAILEKHS 224
+ + R G+ ++ A L++H
Sbjct: 181 RGVVHRRGAMADDIEAWLDEHD 202
>gi|20094073|ref|NP_613920.1| translation factor (SUA5) [Methanopyrus kandleri AV19]
gi|19887062|gb|AAM01850.1| Translation factor (SUA5) [Methanopyrus kandleri AV19]
Length = 212
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 24 EAHA-EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
+ HA + ++AL+ GK++A+P DT+Y +CDA +SEAV R+Y K R P+++ V
Sbjct: 9 DPHAVKHVVRALRAGKLVAIPCDTVYSLSCDATNSEAVRRLYAAKERPKDKPVSVAVH-- 66
Query: 83 SDINRFAVTDHLPH--GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
S + + +P L++L PGPVT+V R + + G ++GVR+PD F
Sbjct: 67 SPEKALELLEPVPRLEAALETLTPGPVTIVAPR-RPGVVAPEVAAGRRTLGVRIPDHPFF 125
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAG--STVVD 197
+ R + TSAN++G+P+ + FE L +R + +G R G STV++
Sbjct: 126 LRVVRRFGKPIVTTSANVSGRPAPTDPDEVFEQLGDRLDILVEG----ECRFGEPSTVIE 181
Query: 198 LTRLGKFKILRPGSAKEETI 217
LT G ILR G+ +E I
Sbjct: 182 LTPEGNIDILREGAMPKEEI 201
>gi|392892259|ref|NP_496826.2| Protein Y48C3A.18, isoform a [Caenorhabditis elegans]
gi|218654185|emb|CAB55118.2| Protein Y48C3A.18, isoform a [Caenorhabditis elegans]
Length = 216
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 111/213 (52%), Gaps = 17/213 (7%)
Query: 23 TEAHAEEAIQA----LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
T + EEAI A G ++A+PTDTLYG + S+ R+Y +K R + PL I
Sbjct: 11 TADNIEEAIDAAVCVFLRGGIVALPTDTLYGISTLLQYSD---RLYALKQRPYEKPLGIF 67
Query: 79 VGD---VSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVP 135
+ + ++R ++D L + LLPGPVT++ R L NPG+ ++ RVP
Sbjct: 68 LPSPTAMKLVSRQTISDELA----NCLLPGPVTLMFERLPC--LPAEFNPGVVNVACRVP 121
Query: 136 DSNFVRVIARGLESALALTSANLTGQP-SSVSVKDFENLWERCACVYDGGVLPSGRAGST 194
D V I + L LA TSAN++G + S+ F +L + D G + S GST
Sbjct: 122 DCPIVSTICKKLGQPLAQTSANVSGSSLNPTSIDHFRDLHPNIDLILDAGSIISSGEGST 181
Query: 195 VVDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
+VDLT F+I+R G A++ET+ L+ L +
Sbjct: 182 IVDLTVESGFRIVRSGCAEKETMQKLKSFGLTK 214
>gi|365155858|ref|ZP_09352205.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus smithii 7_3_47FAA]
gi|363627936|gb|EHL78764.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus smithii 7_3_47FAA]
Length = 346
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 107/194 (55%), Gaps = 9/194 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EEA QAL+ +V+A PT+T+YG +A S EA+ +IYE KGR +PL + + D S +
Sbjct: 22 EEAAQALRLNEVVAFPTETVYGLGANALSDEAIAKIYEAKGRPSDNPLIVHIADTSQLEP 81
Query: 88 FAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
V +P L+++ PGP+T++ + EK+ G++++G+R+PD +
Sbjct: 82 LIV--DIPEKAKRLMEAFWPGPLTIIFKKMPGRLSEKA-TAGMDTVGIRMPDHPVALKLI 138
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS S K +++L + A V DGG G STV+D T +
Sbjct: 139 SACGLPIAAPSANRSGKPSPTSAKHVWDDLAGKIAGVVDGGETGVG-VESTVLDCT-VEP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E I
Sbjct: 197 PVILRPGGLSKEEI 210
>gi|448597638|ref|ZP_21654563.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax alexandrinus JCM
10717]
gi|445739099|gb|ELZ90608.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax alexandrinus JCM
10717]
Length = 199
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 104/202 (51%), Gaps = 16/202 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A++ G+ + PT+T+YG DA +++AV R+++IKGR +PL+ DV
Sbjct: 6 QRAAAAIRRGEAVVYPTETVYGMGADATNADAVERVFDIKGRDRDNPLSAGFPDVDAALE 65
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
F D + LPGPVTVV+ R +S L +L G + +GVR+PD + R
Sbjct: 66 FVEVDDREEAFMRRFLPGPVTVVVERRDS--LPDALVAGKDRVGVRIPDHELAVDLFRAA 123
Query: 148 ESALALTSANLTG-----QPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ + TSAN +G PS +S + + + A V DGG P STVVD G
Sbjct: 124 GTPVTATSANRSGTGSITHPSQLS----DEIRDAVAVVLDGGTTPGTE--STVVD---PG 174
Query: 203 KFKILRPGSAKEETIAILEKHS 224
+ + R G+ ++ A L++H
Sbjct: 175 RGVVHRRGAMADDIEAWLDEHD 196
>gi|281411518|ref|YP_003345597.1| Sua5/YciO/YrdC/YwlC family protein [Thermotoga naphthophila RKU-10]
gi|281372621|gb|ADA66183.1| Sua5/YciO/YrdC/YwlC family protein [Thermotoga naphthophila RKU-10]
Length = 335
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 106/192 (55%), Gaps = 6/192 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA++ L+ G+VI PT+T+YG DA + EA +I+E+KGR +PL + + + +
Sbjct: 18 KEAVELLQNGEVIIFPTETVYGIGADAYNEEACKKIFELKGRPADNPLIVHIHSLEQLEE 77
Query: 88 FAVTDHLPH-GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A + PH L PGP+TV+L R +S + + GL ++ VR+P +
Sbjct: 78 IA-EGYEPHLDFLKKFWPGPLTVIL-RKKSEKIPPVVTAGLPTVAVRMPAHPVALKLIEL 135
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+ +A SAN++G+PS+ +VK E+ + + D G P G ST+VDLT+ K
Sbjct: 136 FGNPIAAPSANISGRPSATNVKHVVEDFMGKVKLIIDAGDTPFG-LESTIVDLTK-EKPV 193
Query: 206 ILRPGSAKEETI 217
+LRPG + E +
Sbjct: 194 LLRPGPVEVERL 205
>gi|448293982|ref|ZP_21484082.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax volcanii DS2]
gi|445568782|gb|ELY23360.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax volcanii DS2]
Length = 205
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A++ G+ + PT+T+YG DA +++AV R+++IKGR +PL+ DV
Sbjct: 12 QRAAAAIRRGEAVVYPTETVYGMGADATNADAVERVFDIKGRDRDNPLSAGFPDVDAALE 71
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
D + LPGPVTVV+ R +S L +L G + IGVR+PD + R
Sbjct: 72 LVEVDDREEAFMRRFLPGPVTVVVERRDS--LPDALVAGKDRIGVRIPDHELALALFRAS 129
Query: 148 ESALALTSANLTG-----QPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ + TSAN +G PS +S + + E A V DGG P STVVD G
Sbjct: 130 GTPVTATSANRSGTGSITHPSQLS----DEIREAVAVVLDGGTTPGTE--STVVD---PG 180
Query: 203 KFKILRPGSAKEETIAILEKHS 224
+ + R G+ ++ A L++H
Sbjct: 181 RGVVHRRGAMADDIEAWLDEHD 202
>gi|292654433|ref|YP_003534330.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax volcanii DS2]
gi|291371068|gb|ADE03295.1| Sua5/YciO/YrdC/YwlC family protein [Haloferax volcanii DS2]
Length = 199
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 103/202 (50%), Gaps = 16/202 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A++ G+ + PT+T+YG DA +++AV R+++IKGR +PL+ DV
Sbjct: 6 QRAAAAIRRGEAVVYPTETVYGMGADATNADAVERVFDIKGRDRDNPLSAGFPDVDAALE 65
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
D + LPGPVTVV+ R +S L +L G + IGVR+PD + R
Sbjct: 66 LVEVDDREEAFMRRFLPGPVTVVVERRDS--LPDALVAGKDRIGVRIPDHELALALFRAS 123
Query: 148 ESALALTSANLTG-----QPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ + TSAN +G PS +S + + E A V DGG P STVVD G
Sbjct: 124 GTPVTATSANRSGTGSITHPSQLS----DEIREAVAVVLDGGTTPGTE--STVVD---PG 174
Query: 203 KFKILRPGSAKEETIAILEKHS 224
+ + R G+ ++ A L++H
Sbjct: 175 RGVVHRRGAMADDIEAWLDEHD 196
>gi|375090866|ref|ZP_09737173.1| Sua5/YciO/YrdC/YwlC family protein [Helcococcus kunzii ATCC 51366]
gi|374565002|gb|EHR36280.1| Sua5/YciO/YrdC/YwlC family protein [Helcococcus kunzii ATCC 51366]
Length = 344
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 112/200 (56%), Gaps = 13/200 (6%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EEA +K G ++A+PT+T+YG A D + EA+ +I+ K R +PL + + D+ +
Sbjct: 18 EEASSIIKNGGLVAIPTETVYGLAADGLNPEALEKIFIAKNRPMDNPLILHISDIFQV-- 75
Query: 88 FAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +T + +L L PGP+TV+L+R S + + GL+++ +R+PD+ R
Sbjct: 76 YELTKDVKETDIEILKKLWPGPLTVILNR--SDIVPDEVTAGLDTVAIRMPDNKITRSFI 133
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ ++ LA SANL+ +PS + +E++ R + DGG G STV+DLT
Sbjct: 134 KICDTPLAAPSANLSTKPSPTTADAVYEDMNGRIDAIIDGGPCTIG-IESTVLDLTEEAP 192
Query: 204 FKILRPGSAKEETIAILEKH 223
KILRPG +E +LEK+
Sbjct: 193 -KILRPGYYTKE---MLEKY 208
>gi|408382487|ref|ZP_11180031.1| Sua5/YciO/YrdC/YwlC family protein [Methanobacterium formicicum DSM
3637]
gi|407814842|gb|EKF85465.1| Sua5/YciO/YrdC/YwlC family protein [Methanobacterium formicicum DSM
3637]
Length = 205
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 106/190 (55%), Gaps = 7/190 (3%)
Query: 33 ALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTD 92
L G + PTDT+YG + +A+ +Y +K R P+++CV V DI + A +
Sbjct: 22 TLSGGGTVVYPTDTVYGLGANLFHEDALQNVYLMKRRPLNKPISLCVSKVEDIQQVAHLN 81
Query: 93 HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
G++ +LPGP T++L++ E L + G + IGVR+PD++ R I+R E +
Sbjct: 82 PQLDGIIKKILPGPYTLILNKKEIVPL--LITGGTDKIGVRIPDNSICREISR--EFPIT 137
Query: 153 LTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGS 211
TSAN++G PS VS ++ ++L + + D G SG STVVDLT + +ILR G+
Sbjct: 138 TTSANISGHPSPVSAQEARKDLDDHPDILIDSGPC-SGGISSTVVDLT-VSPPRILREGA 195
Query: 212 AKEETIAILE 221
E+ + +E
Sbjct: 196 GMEKLLQFME 205
>gi|338535114|ref|YP_004668448.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus fulvus HW-1]
gi|337261210|gb|AEI67370.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus fulvus HW-1]
Length = 203
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H + A++ L+ G ++A PTDT +G CD S + + R+Y++KGR PL+ D+SD+
Sbjct: 17 HIQRAVEVLERGGLLAYPTDTYFGLGCDLSSKKGIERLYQLKGRDKKKPLSFLCPDLSDV 76
Query: 86 NRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLE-SIGVRVPDSNFVRVIA 144
R+A + + + SL PG T +L E++ L L + +G+RVPDS VR +A
Sbjct: 77 ARYAHVSNFAYRTMKSLTPGAFTFIL---EATRLVPDLMMSKQKQVGIRVPDSALVRELA 133
Query: 145 RGLESALALTSA-NLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
R L L TSA N G+P + KD + L + DGGV + STV+ L
Sbjct: 134 RALGRPLVTTSATNTEGEPLT-DAKDIKAELGHGLDLILDGGV--TLNEPSTVISLIG-D 189
Query: 203 KFKILRPGSAKEE 215
+ILR G + E
Sbjct: 190 SLEILRQGKGRLE 202
>gi|222085082|ref|YP_002543612.1| translation factor sua5 protein [Agrobacterium radiobacter K84]
gi|398382408|ref|ZP_10540496.1| putative translation factor (SUA5) [Rhizobium sp. AP16]
gi|221722530|gb|ACM25686.1| translation factor sua5 protein [Agrobacterium radiobacter K84]
gi|397717573|gb|EJK78189.1| putative translation factor (SUA5) [Rhizobium sp. AP16]
Length = 324
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 102/190 (53%), Gaps = 4/190 (2%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G I +PT+T+YG A DA + A+ RIYE KGR +PL + D++ R+A+ D +
Sbjct: 25 GLPIGLPTETVYGLAADATNPAAITRIYETKGRPRFNPLICHMSDLAMAERYAIFDPVSR 84
Query: 97 GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSA 156
L ++ PGP+T+VL S++ GL+++G+R+P F + R LA SA
Sbjct: 85 KLAEAFWPGPLTLVLPLRPESDIHPLATAGLDTVGIRIP-QGFAGELIRAFGRPLAAPSA 143
Query: 157 NLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEE 215
N +G+ S+ S ++L ER + + D G G ST+V + G+ ++LRPG +
Sbjct: 144 NTSGKISATSADHVHDDLGERISLILDAGASVVG-VESTIVKVEH-GEMRLLRPGGLAAD 201
Query: 216 TIAILEKHSL 225
I + SL
Sbjct: 202 EIERVAGQSL 211
>gi|427407196|ref|ZP_18897401.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas sp. F0473]
gi|425707671|gb|EKU70715.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas sp. F0473]
Length = 363
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 109/205 (53%), Gaps = 9/205 (4%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++ P TE E A ++ G+++A PT+T+YG + + A RIY+ KGR +PL +
Sbjct: 5 IISPVTETDIEHAAGLIRRGQLVAFPTETVYGLGANGLDASACARIYKAKGRPADNPLIL 64
Query: 78 CVGDVS---DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRV 134
+ D+S D+ R V H LL PGP+TV++ + ++++ + GL ++GVR
Sbjct: 65 HISDLSMAADVAR-EVPPAAAH-LLTVFAPGPLTVIVPK--AAHIPDIVTGGLPTVGVRC 120
Query: 135 PDSNFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGS 193
P ++ R + R +A SAN +G+PS + ++L R + DGG G S
Sbjct: 121 PANDIARALIRAAGVPVAAPSANTSGRPSPTAAAMVADDLAGRIPLILDGGACRWG-IES 179
Query: 194 TVVDLTRLGKFKILRPGSAKEETIA 218
T+VD T G ILRPG+ E IA
Sbjct: 180 TIVDCTAEGAVTILRPGAVTREMIA 204
>gi|433589390|ref|YP_007278886.1| Sua5/YciO/YrdC/YwlC family protein [Natrinema pellirubrum DSM
15624]
gi|448335522|ref|ZP_21524666.1| Sua5/YciO/YrdC/YwlC family protein [Natrinema pellirubrum DSM
15624]
gi|433304170|gb|AGB29982.1| Sua5/YciO/YrdC/YwlC family protein [Natrinema pellirubrum DSM
15624]
gi|445616912|gb|ELY70524.1| Sua5/YciO/YrdC/YwlC family protein [Natrinema pellirubrum DSM
15624]
Length = 195
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 7/197 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A +A++ GK++ PT+T+YG A DA S AV R++E+KGR + P+++ V V +
Sbjct: 5 DRAAEAIEEGKLVVYPTETVYGLAADALSPAAVERVFEVKGRDRSKPVSMAVPSVPSALQ 64
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ + LPGPVTV+ R E+ + L G + +GVRVPD +
Sbjct: 65 HVRATERERQFMGTFLPGPVTVLCRRRET--VPDELTAGRDRVGVRVPDHAVALRLCERA 122
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ + TSAN++G+ S+ V D + + E A V D G G STVVD++ I
Sbjct: 123 GTPITSTSANVSGRESACQVDDLDPEIREDAAVVLDSGETDGG-TESTVVDVS---SGTI 178
Query: 207 LRPGSAKEETIAILEKH 223
R G+ +E A LE+H
Sbjct: 179 HRRGAMADEIEAWLEQH 195
>gi|448337498|ref|ZP_21526575.1| Sua5/YciO/YrdC/YwlC family protein [Natrinema pallidum DSM 3751]
gi|445625404|gb|ELY78764.1| Sua5/YciO/YrdC/YwlC family protein [Natrinema pallidum DSM 3751]
Length = 195
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 7/197 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A+++G ++ PT+T+YG A SE V R++E+KGR T PL+ V V +
Sbjct: 5 DRAADAIESGDLVVYPTETVYGLGGAALESETVERVFEVKGRDRTKPLSFAVPSVPSALQ 64
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ + + LPGPVTV+ R + + L G E +GVR+PD++ +
Sbjct: 65 YVRATDRERRFMATFLPGPVTVLCRR--RAAVPDELTAGRERVGVRIPDNDLALALCERA 122
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ + TSAN++G+ S+ + D + + E A V DGG G STVVD++ I
Sbjct: 123 GTPITATSANVSGRESARRLDDLDPEIREAAAVVLDGGRTDGG-TESTVVDVS---SGTI 178
Query: 207 LRPGSAKEETIAILEKH 223
R G+ +E A LE+H
Sbjct: 179 HRHGAQADEIEAWLEQH 195
>gi|406898381|gb|EKD42000.1| hypothetical protein ACD_73C00396G0003 [uncultured bacterium]
Length = 318
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 113/200 (56%), Gaps = 8/200 (4%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
+K G+V+A PT+T++G +A +++V RI++ KGR +PL + + D+S +N V
Sbjct: 16 IKKGQVVAFPTETVFGLGANAFEAQSVARIFKAKGRPADNPLIVHICDLSQLN-LVVKKI 74
Query: 94 LPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESAL 151
P L+D PGP+T++L + ++ + +++ GL+++GVR+PD R + L
Sbjct: 75 SPQAQILIDKFFPGPLTLILPKSDA--IAPNVSAGLKTVGVRMPDLKLARDFIKACGVPL 132
Query: 152 ALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
A SAN++G+PS + +D ++ R CV G G STV+D + L K KILR G
Sbjct: 133 AAPSANISGKPSGTTWQDVLKDFKGRIPCVLKGKPSEFGME-STVIDCS-LSKPKILRLG 190
Query: 211 SAKEETIAILEKHSLVEEPA 230
+ E + ++ SL + A
Sbjct: 191 AITVEELEVVLGKSLTRKNA 210
>gi|325958344|ref|YP_004289810.1| Sua5/YciO/YrdC/YwlC family protein [Methanobacterium sp. AL-21]
gi|325329776|gb|ADZ08838.1| Sua5/YciO/YrdC/YwlC family protein [Methanobacterium sp. AL-21]
Length = 204
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A + LK GK++ PTDT+YG A +A + AV+++++ K R T +++C+ ++ IN
Sbjct: 18 QAKEYLKQGKIVVYPTDTVYGIAANAYNESAVSKVFDTKKRLKTKAVSLCLAEIEAINDV 77
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A D+ L++ L PGP TV++ + E + L G IG+R+PD+ R +A E
Sbjct: 78 AFMDNKTEILVEQLFPGPFTVIMRKKEQ--ISPLLTGGTNKIGIRIPDNKLSRDLAS--E 133
Query: 149 SALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ TSAN++G + K+ E L + V D GV G STVVD+T K IL
Sbjct: 134 FPITSTSANISGLNVPETPKEVVEQLGDSVDLVLDAGVCKYGYH-STVVDMTG-DKPIIL 191
Query: 208 RPGSAKEETIAIL 220
R G+ E + +L
Sbjct: 192 RMGAGYETLMNLL 204
>gi|374320828|ref|YP_005073957.1| hypothetical protein HPL003_04835 [Paenibacillus terrae HPL-003]
gi|357199837|gb|AET57734.1| hypothetical protein HPL003_04835 [Paenibacillus terrae HPL-003]
Length = 412
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 117/224 (52%), Gaps = 16/224 (7%)
Query: 7 NGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEI 66
G+ S E +G R A E EA L+ G+ +A PT+T+YG DA S+EAV ++
Sbjct: 53 EGESSGEMLSGQARIAVEKGIREAAVLLQAGETVAFPTETVYGLGADARSTEAVESVFAA 112
Query: 67 KGRKHTSPLAICVGDVSDINRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP 125
KGR +PL + V D + ++ + L+D+ PGP+T+VL + ++L+P
Sbjct: 113 KGRPSDNPLIVHVSDPAQLDGMVTEVNDTARALMDAFWPGPLTLVL-----PVMPQALSP 167
Query: 126 ----GLESIGVRVPDSNF-VRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCAC 179
GL+++GVR+PD +R+IA LA SAN +G+PS + E+L R
Sbjct: 168 RVTAGLDTVGVRMPDHPVALRLIAEA-GCPLAAPSANRSGRPSPTLAQHVREDLEGRIGG 226
Query: 180 VYDGGVLPSGRA-GSTVVDLTRLGKFKILRPGSAKEETIAILEK 222
+ DGG P+G STVV G ILRPG E +A + +
Sbjct: 227 ILDGG--PTGVGLESTVVQAGDDGTVTILRPGGVTAEQLAAVAR 268
>gi|395765613|ref|ZP_10446207.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella sp. DB5-6]
gi|395411167|gb|EJF77701.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella sp. DB5-6]
Length = 320
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 4/208 (1%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P A +EA+ LK GK++A+P++T+YG A DA + AV+ I+ K R +PL
Sbjct: 3 ILPLNSASIKEAVALLKQGKLVALPSETVYGLAGDATNGRAVSSIFFTKRRPQFNPLIAH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V +S R+ D L L++ PGP+T+VLS N+ GL ++ VR PDS+
Sbjct: 63 VSSISMAERYVEIDFLSRRLMEVFWPGPLTLVLSLKTQHNIHPLTTSGLNTLAVRFPDSH 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F V+ + LA SAN +G S S + F +L E + DGG G ST++
Sbjct: 123 FAEVV-QCFGRPLAAPSANRSGCLSPTSAEAVFASLGESVPLILDGGPSKIGLE-STIIK 180
Query: 198 LTRLGKFKILRPGSAKEETIAILEKHSL 225
+ + +LRPG E I + + SL
Sbjct: 181 VCNESIY-LLRPGGLPAEEIEKVAEKSL 207
>gi|262171882|ref|ZP_06039560.1| YrdC family protein [Vibrio mimicus MB-451]
gi|261892958|gb|EEY38944.1| YrdC family protein [Vibrio mimicus MB-451]
Length = 322
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + G
Sbjct: 11 TPADIECAAQLLKQGQLVAIPTETVYGLAADASQPEAVKQIFSAKGRPANHPLIVHFGSA 70
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
I +A TD +P + L ++ PGP+T++L + E ++ + GLE++G+RVP +
Sbjct: 71 EQIAEWA-TDVVPEAYQLAEAFWPGPLTMLLPKAE--HVSPVVTGGLETVGLRVPAHPVL 127
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L + A V DGG G ST+VDLT
Sbjct: 128 LEILKAHHLAVAAPSANPYKKLSPTSAQQVLDGLNGKLAAVLDGGECQHGLE-STIVDLT 186
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 187 S-KPFRVLRAG 196
>gi|449147138|ref|ZP_21777878.1| hypothetical protein D908_20383 [Vibrio mimicus CAIM 602]
gi|449077246|gb|EMB48240.1| hypothetical protein D908_20383 [Vibrio mimicus CAIM 602]
Length = 329
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + G
Sbjct: 18 TPADIECAAQLLKQGQLVAIPTETVYGLAADASQPEAVKQIFSAKGRPANHPLIVHFGSA 77
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
I +A TD +P + L ++ PGP+T++L + E ++ + GLE++G+RVP +
Sbjct: 78 EQIAEWA-TDVVPEAYQLAEAFWPGPLTMLLPKAE--HVSPVVTGGLETVGLRVPAHPVL 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L + A V DGG G ST+VDLT
Sbjct: 135 LEILKAHHLAVAAPSANPYKKLSPTSAQQVLDGLNGKLAAVLDGGECQHGLE-STIVDLT 193
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 194 S-KPFRVLRAG 203
>gi|258621755|ref|ZP_05716786.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258585986|gb|EEW10704.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 329
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + G
Sbjct: 18 TPADIECAAQLLKQGQLVAIPTETVYGLAADASQPEAVKQIFSAKGRPANHPLIVHFGSA 77
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
I +A TD +P + L ++ PGP+T++L + E ++ + GLE++G+RVP +
Sbjct: 78 EQIAEWA-TDVVPEAYQLAEAFWPGPLTMLLPKAE--HVSPVVTGGLETVGLRVPAHPVL 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L + A V DGG G ST+VDLT
Sbjct: 135 LEILKAHHLAVAAPSANPYKKLSPTSAQQVLDGLNGKLAAVLDGGECQHGLE-STIVDLT 193
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 194 S-KPFRVLRAG 203
>gi|395790234|ref|ZP_10469728.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella taylorii 8TBB]
gi|395426885|gb|EJF93003.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella taylorii 8TBB]
Length = 320
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 103/200 (51%), Gaps = 4/200 (2%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P A +EA+ LK GK++A+PT+T+YG A DA + AV+ I+ K R +PL +
Sbjct: 3 ILPFNSASIKEAVALLKQGKLVALPTETVYGLAGDATNGRAVSSIFFTKRRPQFNPLIVH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V +S R+ D L L++ PGP+T+VLS N+ GL ++ VR PDS+
Sbjct: 63 VSSISMAERYVEIDFLSRRLMEVFWPGPLTLVLSLKAQHNIHPLTTSGLNTLAVRFPDSH 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F V+ + LA SAN +G S S + F +L + DGG G ST++
Sbjct: 123 FAEVV-QCFGQPLAAPSANQSGCLSPTSAEAVFASLGGAVPLILDGGPSKIGLE-STIIK 180
Query: 198 LTRLGKFKILRPGSAKEETI 217
+ + +LRPG E I
Sbjct: 181 VCNEDIY-LLRPGGLSSEEI 199
>gi|448417446|ref|ZP_21579382.1| translation factor sua5 [Halosarcina pallida JCM 14848]
gi|445677934|gb|ELZ30430.1| translation factor sua5 [Halosarcina pallida JCM 14848]
Length = 207
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 95/183 (51%), Gaps = 7/183 (3%)
Query: 43 PTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSL 102
PT+T+YG DA ++AV R++E+KGR T PL++ V DV+ +A ++
Sbjct: 24 PTETVYGLGADATDADAVERVFELKGRDRTKPLSVGVPDVAAAREYARPTPFETRFMERF 83
Query: 103 LPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQP 162
LPGPVTVV+ RG +L +L G +GVRVPD R + TSAN +G P
Sbjct: 84 LPGPVTVVVERG--PDLPDALTAGRARVGVRVPDYETTLEFYRRAGRPVTATSANRSGAP 141
Query: 163 SSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILE 221
S + + + L +R V D G P G STVVD G+ I R G+ +E A L
Sbjct: 142 SIRTPAELDPALRKRVGAVLDAGETPGG-TESTVVD---PGRNVIHRRGAMADEVAAWLT 197
Query: 222 KHS 224
+ +
Sbjct: 198 EEA 200
>gi|448346863|ref|ZP_21535743.1| Sua5/YciO/YrdC/YwlC family protein [Natrinema altunense JCM 12890]
gi|445631522|gb|ELY84752.1| Sua5/YciO/YrdC/YwlC family protein [Natrinema altunense JCM 12890]
Length = 195
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 7/197 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A+++G ++ PT+T+YG A SE V R++E+KGR T PL+ V V +
Sbjct: 5 DRAADAIESGALVVYPTETVYGLGGAALDSETVERVFEVKGRDRTKPLSFAVPSVPSALQ 64
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ + S LPGPVTV+ R + + L G E +GVR+PD++ +
Sbjct: 65 YVRATDRERRFMASFLPGPVTVLCRR--RAAVPDELTAGRERVGVRIPDNDLALALCERA 122
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ + TSAN++G+ S+ + D + + E A V DGG G STVVD++ I
Sbjct: 123 GTPITATSANVSGRESARRLDDLDPEIREAAAVVLDGGRTDGG-TESTVVDVS---SGTI 178
Query: 207 LRPGSAKEETIAILEKH 223
R G+ +E A LE H
Sbjct: 179 HRRGAQADEIEAWLEGH 195
>gi|442321027|ref|YP_007361048.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus stipitatus DSM
14675]
gi|441488669|gb|AGC45364.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus stipitatus DSM
14675]
Length = 203
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H + A++ L+ G ++A PTDT YG CD S +A+ R+Y++KGR PL+ D+SD+
Sbjct: 17 HIQRAVEVLERGGLVAYPTDTYYGMGCDLGSKKAIERLYQLKGRDKKKPLSFLCPDLSDV 76
Query: 86 NRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLE-SIGVRVPDSNFVRVIA 144
R+A + + + L PG T +L E++ L L + +G+RVPD+ R +A
Sbjct: 77 ARYAHVSNFAYRTMKGLTPGAFTFIL---EATRLVPDLMMTRQKQVGIRVPDAPLARELA 133
Query: 145 RGLESALALTS-ANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
R L L TS +NL G+P + + + L + DGGV + STVV L
Sbjct: 134 RALGRPLVTTSVSNLEGEPLTDARDIKDALGHGLDLILDGGV--TLNEPSTVVSLIG-DT 190
Query: 204 FKILRPGSAKEE 215
+ILR G + E
Sbjct: 191 LEILRQGKGRLE 202
>gi|389845747|ref|YP_006347986.1| DNA binding protein, translation factor [Haloferax mediterranei
ATCC 33500]
gi|448616633|ref|ZP_21665343.1| DNA binding protein, translation factor [Haloferax mediterranei
ATCC 33500]
gi|388243053|gb|AFK17999.1| DNA binding protein, translation factor [Haloferax mediterranei
ATCC 33500]
gi|445751288|gb|EMA02725.1| DNA binding protein, translation factor [Haloferax mediterranei
ATCC 33500]
Length = 203
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 104/207 (50%), Gaps = 16/207 (7%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
++ ++A A++ G+ + PT+T+YG DA + +A+ R+++IKGR PL+ DV
Sbjct: 2 SDDDVKQAADAIRRGEAVVYPTETVYGMGADATNPDAIERVFDIKGRDRDKPLSAGFPDV 61
Query: 83 SDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ V D + LPGPVTVV+ R +S L L G + +GVRVPD +
Sbjct: 62 DAALEYVVVDDREVAFMRRFLPGPVTVVVERRDS--LPDVLVSGRDRVGVRVPDHDLALD 119
Query: 143 IARGLESALALTSANLTG-----QPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVD 197
+ + TSAN +G PS +S + + E A V DGG P STVVD
Sbjct: 120 FFEQAGTPVTATSANRSGTGSITNPSQLS----DEIREAVAFVLDGGTTPGTE--STVVD 173
Query: 198 LTRLGKFKILRPGSAKEETIAILEKHS 224
G+ I R G+ +E A LE H+
Sbjct: 174 ---PGRGIIHRRGAMADEIEAWLETHA 197
>gi|423554221|ref|ZP_17530547.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus ISP3191]
gi|401181360|gb|EJQ88511.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus ISP3191]
Length = 346
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S +
Sbjct: 22 QEAAKLLRENETIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQL-- 79
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ + +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 80 YGIVKEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLHTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|414161679|ref|ZP_11417933.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410875391|gb|EKS23311.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 347
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF-AVTDHLP 95
G ++A+PT+T+YG +AC +AV RIYE KGR +PL I + D S +N F A
Sbjct: 31 GGLVAIPTETVYGLGANACDDQAVRRIYEAKGRPSDNPLIIHIHDKSQLNDFVASYSKEV 90
Query: 96 HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTS 155
L+D+ PGP++ +L E+ ++ GL+SI VR+P R I + +A S
Sbjct: 91 EQLMDAFWPGPISFILPLKPGYLCER-VSGGLDSIAVRMPSHPIGRAILKYTNLPIAAPS 149
Query: 156 ANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKE 214
AN++G+PS + F ++ R + +G G STV+D T+ ++I RPG+ E
Sbjct: 150 ANISGRPSPTTFSHVFNDMDGRVEGIVNGDQSEEGLE-STVLDCTQY-PYRIARPGAITE 207
Query: 215 ETI 217
E I
Sbjct: 208 EMI 210
>gi|108757718|ref|YP_632028.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus xanthus DK 1622]
gi|108461598|gb|ABF86783.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus xanthus DK 1622]
Length = 203
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H + A++ L+ G ++A PTDT +G CD S + + R+Y++KGR PL+ D+SD+
Sbjct: 17 HIQRAVEVLERGGLLAYPTDTYFGLGCDLSSKKGIERLYQLKGRDKKKPLSFLCPDLSDV 76
Query: 86 NRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLE-SIGVRVPDSNFVRVIA 144
R+A + + + SL PG T +L E++ L L + +G+RVPDS VR +
Sbjct: 77 ARYAHVSNFAYRTMKSLTPGAFTFIL---EATRLVPDLMMSKQKQVGIRVPDSALVRELT 133
Query: 145 RGLESALALTSA-NLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
R L L TSA N G+P + KD + +L + DGGV + STV+ L
Sbjct: 134 RALGRPLVTTSATNTEGEPLT-DAKDIKADLGHGLDLILDGGV--TLNEPSTVISLIG-D 189
Query: 203 KFKILRPGSAKEE 215
+ILR G + E
Sbjct: 190 SLEILRQGKGRLE 202
>gi|220932631|ref|YP_002509539.1| Sua5/YciO/YrdC/YwlC family protein [Halothermothrix orenii H 168]
gi|219993941|gb|ACL70544.1| Sua5/YciO/YrdC/YwlC family protein [Halothermothrix orenii H 168]
Length = 364
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 117/225 (52%), Gaps = 13/225 (5%)
Query: 1 MAFSLENGQVSVE--NKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSE 58
M + G+V+ + K +++ E L+ G+V+A PT+T+YG DA S
Sbjct: 3 MEYKTRIGRVNRDLIKKQDILKLKENDAIREGASLLQKGEVVAFPTETVYGLGADATSES 62
Query: 59 AVNRIYEIKGRKHTSPLAICVGDVS---DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGE 115
AV +I++ KGR +PL + +G++ DI + ++D L+ PGP+T++ + E
Sbjct: 63 AVKKIFKAKGRPRDNPLIVHIGEMDQLYDIIKNPLSDTT-RRLIKHFWPGPLTLIFEKKE 121
Query: 116 SSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA-LALTSANLTGQPSSVSVKD-FENL 173
+ + GLES+ VR PD+ R + GL S +A SANL+G PS + F++L
Sbjct: 122 T--IPGVTTAGLESVAVRFPDNPVARALI-GLSSVPVAAPSANLSGSPSPTRAEHVFKDL 178
Query: 174 WERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIA 218
R + DGG G STV+D+ R G ILRPG E IA
Sbjct: 179 KGRIPFIIDGGPSSVG-VESTVIDI-RSGNPVILRPGGVTREEIA 221
>gi|424807974|ref|ZP_18233376.1| hypothetical protein SX4_1891 [Vibrio mimicus SX-4]
gi|342324511|gb|EGU20292.1| hypothetical protein SX4_1891 [Vibrio mimicus SX-4]
Length = 251
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + G
Sbjct: 18 TPADIECAAQLLKQGQLVAIPTETVYGLAADASQPEAVKQIFSAKGRPANHPLIVHFGSA 77
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
I +A TD +P + L ++ PGP+T++L + E ++ + GLE++G+RVP +
Sbjct: 78 EQIAEWA-TDVVPEAYQLAEAFWPGPLTMLLPKAE--HVSPVVTGGLETVGLRVPAHPVL 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L + A V DGG G ST+VDLT
Sbjct: 135 LEILKAHHLAVAAPSANPYKKLSPTSAQQVLDGLNGKLAAVLDGGECQHGLE-STIVDLT 193
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 194 S-KPFRVLRAG 203
>gi|424612899|ref|ZP_18051702.1| SUA5 domain protein, partial [Vibrio cholerae HC-41A1]
gi|408015089|gb|EKG52685.1| SUA5 domain protein, partial [Vibrio cholerae HC-41A1]
Length = 220
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 18 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 77
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 78 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 135 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 193
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 194 S-KPFRVLRAG 203
>gi|440225735|ref|YP_007332826.1| Sua5/YciO/YrdC family protein [Rhizobium tropici CIAT 899]
gi|440037246|gb|AGB70280.1| Sua5/YciO/YrdC family protein [Rhizobium tropici CIAT 899]
Length = 324
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 99/184 (53%), Gaps = 4/184 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A L G I +PT+T+YG A DA + A+ RIYE KGR +PL + D++ R
Sbjct: 16 EVATATLAQGLPIGLPTETVYGLAADATNPTAITRIYETKGRPRFNPLICHMSDLAMAER 75
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+A+ D + L ++ PGP+T+VL S + GL+++G+RVP F + R
Sbjct: 76 YAIFDPISRKLAEAFWPGPLTLVLPLKPDSGIHPLATAGLDTVGIRVP-QGFAGELIRVF 134
Query: 148 ESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ LA SAN +G+ S+ + ++L ER + D G G ST+V + G+ ++
Sbjct: 135 DRPLAAPSANTSGKISATNADHVNDDLGERITLILDAGSSVVG-VESTIVKVED-GEMRL 192
Query: 207 LRPG 210
LRPG
Sbjct: 193 LRPG 196
>gi|421350857|ref|ZP_15801222.1| SUA5 domain protein [Vibrio cholerae HE-25]
gi|395951302|gb|EJH61916.1| SUA5 domain protein [Vibrio cholerae HE-25]
Length = 320
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 10 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 69
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 70 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 126
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 127 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 185
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 186 S-KPFRVLRAG 195
>gi|359793556|ref|ZP_09296303.1| Sua5/YciO/YrdC/YwlC family protein [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359250269|gb|EHK53789.1| Sua5/YciO/YrdC/YwlC family protein [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 324
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 105/193 (54%), Gaps = 5/193 (2%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+R A EA +EA+ L+ G+++A+PT+T+YG A DA + AV +I+E KGR +PL
Sbjct: 4 IRNAAEAM-DEALALLRAGEIVAIPTETVYGLAGDATNGAAVAKIFEAKGRPRFNPLIAH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V V+ A D L L + PGP+T+VL + + GL++I +R+P
Sbjct: 63 VSMVAMAEEIAELDPLSRKLAEKFWPGPLTLVLPLKPGGAIHPLVTAGLDTIALRMPRGF 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVD 197
++I R LA SAN +G+ S + ++L +R V DGG P G ST+V
Sbjct: 123 GAKLIER-FGRPLAAPSANSSGRISPTTAAAVADDLGDRIRLVVDGGATPVGLE-STIVK 180
Query: 198 LTRLGKFKILRPG 210
+ GK ++LRPG
Sbjct: 181 VED-GKLRLLRPG 192
>gi|448589416|ref|ZP_21649575.1| DNA binding protein, translation factor [Haloferax elongans ATCC
BAA-1513]
gi|445735844|gb|ELZ87392.1| DNA binding protein, translation factor [Haloferax elongans ATCC
BAA-1513]
Length = 202
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 102/204 (50%), Gaps = 10/204 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A A++ G + PT+T+YG DA S EAV R+++IKGR PL+ DV
Sbjct: 7 TNDDVHRAAAAIRDGDAVVYPTETVYGMGADATSPEAVERVFDIKGRDRDKPLSAGFPDV 66
Query: 83 -SDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
S ++ VTD + LPGPVTVV+ R +S L L E +GVRVPD
Sbjct: 67 DSALDYVEVTDR-EEAFMRRFLPGPVTVVVERRDS--LPDVLVSSRERVGVRVPDHELAL 123
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
+ R E+ + TSANL+G S + + + + A V DGG P STVVD
Sbjct: 124 ELFRAAETPVTATSANLSGAGSITNPSQLPDEIHDAVAFVLDGGTTPGTE--STVVD--- 178
Query: 201 LGKFKILRPGSAKEETIAILEKHS 224
G+ I R G+ ++ A LE S
Sbjct: 179 PGQGIIHRRGAMADDIEAWLEDES 202
>gi|424660491|ref|ZP_18097738.1| SUA5 domain protein [Vibrio cholerae HE-16]
gi|408050400|gb|EKG85563.1| SUA5 domain protein [Vibrio cholerae HE-16]
Length = 329
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 18 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 77
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 78 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSSVVTGGLESVGIRVPAHPVL 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 135 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 193
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 194 S-KPFRVLRAG 203
>gi|422909877|ref|ZP_16944519.1| SUA5 domain protein [Vibrio cholerae HE-09]
gi|341634133|gb|EGS58900.1| SUA5 domain protein [Vibrio cholerae HE-09]
Length = 321
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 10 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 69
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 70 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSSVVTGGLESVGIRVPAHPVL 126
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 127 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 185
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 186 S-KPFRVLRAG 195
>gi|421342855|ref|ZP_15793260.1| SUA5 domain protein [Vibrio cholerae HC-43B1]
gi|395943372|gb|EJH54047.1| SUA5 domain protein [Vibrio cholerae HC-43B1]
Length = 313
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 2 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 61
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 62 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 118
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 119 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 177
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 178 S-KPFRVLRAG 187
>gi|407478327|ref|YP_006792204.1| Sua5/YciO/YrdC/YwlC family protein [Exiguobacterium antarcticum B7]
gi|407062406|gb|AFS71596.1| Sua5/YciO/YrdC/YwlC family protein [Exiguobacterium antarcticum B7]
Length = 332
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 104/194 (53%), Gaps = 12/194 (6%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA++ L G+V+A+PT+T+YG A DA + AV RI+ KGR +PL + V + +F
Sbjct: 13 EAVRLLLEGEVVAIPTETVYGLAGDATNETAVRRIFAAKGRPSDNPLIVHVASIEQAKQF 72
Query: 89 AVTDHLPH---GLLDSLLPGPVTVVL-SRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
H+P L+D+ PG +T++L S G +S+L + GL++IG+R+PD +
Sbjct: 73 VT--HIPDVATQLMDTFWPGALTIILDSNGSASSL---VTAGLDTIGLRMPDHPLALQLI 127
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
LA SAN +G+PS S +L R A + DGG G STV+D T
Sbjct: 128 EATGLGLAAPSANRSGKPSPTSSAHVAHDLSGRIAAIVDGGETGIG-VESTVIDCTA-NP 185
Query: 204 FKILRPGSAKEETI 217
ILRPG E I
Sbjct: 186 PVILRPGGVTREQI 199
>gi|417815974|ref|ZP_12462606.1| SUA5 domain protein [Vibrio cholerae HCUF01]
gi|418343377|ref|ZP_12950165.1| SUA5 domain protein [Vibrio cholerae HC-28A1]
gi|421316046|ref|ZP_15766617.1| SUA5 domain protein [Vibrio cholerae CP1032(5)]
gi|421331376|ref|ZP_15781856.1| SUA5 domain protein [Vibrio cholerae CP1046(19)]
gi|422306630|ref|ZP_16393803.1| SUA5 domain protein [Vibrio cholerae CP1035(8)]
gi|422891192|ref|ZP_16933577.1| SUA5 domain protein [Vibrio cholerae HC-40A1]
gi|422902074|ref|ZP_16937406.1| SUA5 domain protein [Vibrio cholerae HC-48A1]
gi|422925354|ref|ZP_16958379.1| SUA5 domain protein [Vibrio cholerae HC-38A1]
gi|423144673|ref|ZP_17132282.1| SUA5 domain protein [Vibrio cholerae HC-19A1]
gi|423149352|ref|ZP_17136680.1| SUA5 domain protein [Vibrio cholerae HC-21A1]
gi|423153169|ref|ZP_17140363.1| SUA5 domain protein [Vibrio cholerae HC-22A1]
gi|423730646|ref|ZP_17703960.1| SUA5 domain protein [Vibrio cholerae HC-17A1]
gi|423752607|ref|ZP_17711974.1| SUA5 domain protein [Vibrio cholerae HC-50A2]
gi|423819512|ref|ZP_17715770.1| SUA5 domain protein [Vibrio cholerae HC-55C2]
gi|423927125|ref|ZP_17730647.1| SUA5 domain protein [Vibrio cholerae HC-77A1]
gi|423952262|ref|ZP_17733976.1| SUA5 domain protein [Vibrio cholerae HE-40]
gi|423980293|ref|ZP_17737528.1| SUA5 domain protein [Vibrio cholerae HE-46]
gi|423997258|ref|ZP_17740517.1| SUA5 domain protein [Vibrio cholerae HC-02C1]
gi|424001668|ref|ZP_17744754.1| SUA5 domain protein [Vibrio cholerae HC-17A2]
gi|424005829|ref|ZP_17748809.1| SUA5 domain protein [Vibrio cholerae HC-37A1]
gi|424018903|ref|ZP_17758699.1| SUA5 domain protein [Vibrio cholerae HC-59B1]
gi|424023846|ref|ZP_17763506.1| SUA5 domain protein [Vibrio cholerae HC-62B1]
gi|424585968|ref|ZP_18025558.1| SUA5 domain protein [Vibrio cholerae CP1030(3)]
gi|424594667|ref|ZP_18034000.1| SUA5 domain protein [Vibrio cholerae CP1040(13)]
gi|424598533|ref|ZP_18037727.1| SUA5 domain protein [Vibrio Cholerae CP1044(17)]
gi|424606262|ref|ZP_18045222.1| SUA5 domain protein [Vibrio cholerae CP1050(23)]
gi|424616717|ref|ZP_18055404.1| SUA5 domain protein [Vibrio cholerae HC-42A1]
gi|424624448|ref|ZP_18062920.1| SUA5 domain protein [Vibrio cholerae HC-50A1]
gi|424640007|ref|ZP_18077897.1| SUA5 domain protein [Vibrio cholerae HC-56A1]
gi|424644640|ref|ZP_18082388.1| SUA5 domain protein [Vibrio cholerae HC-56A2]
gi|424648041|ref|ZP_18085711.1| SUA5 domain protein [Vibrio cholerae HC-57A1]
gi|424652319|ref|ZP_18089795.1| SUA5 domain protein [Vibrio cholerae HC-57A2]
gi|424656224|ref|ZP_18093522.1| SUA5 domain protein [Vibrio cholerae HC-81A2]
gi|443503175|ref|ZP_21070157.1| SUA5 domain protein [Vibrio cholerae HC-64A1]
gi|443507083|ref|ZP_21073867.1| SUA5 domain protein [Vibrio cholerae HC-65A1]
gi|443511200|ref|ZP_21077857.1| SUA5 domain protein [Vibrio cholerae HC-67A1]
gi|443514758|ref|ZP_21081289.1| SUA5 domain protein [Vibrio cholerae HC-68A1]
gi|443518563|ref|ZP_21084973.1| SUA5 domain protein [Vibrio cholerae HC-71A1]
gi|443523450|ref|ZP_21089679.1| SUA5 domain protein [Vibrio cholerae HC-72A2]
gi|443526865|ref|ZP_21092932.1| SUA5 domain protein [Vibrio cholerae HC-78A1]
gi|443531063|ref|ZP_21097078.1| SUA5 domain protein [Vibrio cholerae HC-7A1]
gi|340041700|gb|EGR02666.1| SUA5 domain protein [Vibrio cholerae HCUF01]
gi|341624235|gb|EGS49741.1| SUA5 domain protein [Vibrio cholerae HC-48A1]
gi|341625322|gb|EGS50785.1| SUA5 domain protein [Vibrio cholerae HC-40A1]
gi|341647667|gb|EGS71744.1| SUA5 domain protein [Vibrio cholerae HC-38A1]
gi|356420269|gb|EHH73797.1| SUA5 domain protein [Vibrio cholerae HC-21A1]
gi|356425531|gb|EHH78901.1| SUA5 domain protein [Vibrio cholerae HC-19A1]
gi|356431969|gb|EHH85168.1| SUA5 domain protein [Vibrio cholerae HC-22A1]
gi|356436638|gb|EHH89750.1| SUA5 domain protein [Vibrio cholerae HC-28A1]
gi|395921003|gb|EJH31823.1| SUA5 domain protein [Vibrio cholerae CP1032(5)]
gi|395932640|gb|EJH43383.1| SUA5 domain protein [Vibrio cholerae CP1046(19)]
gi|395961046|gb|EJH71390.1| SUA5 domain protein [Vibrio cholerae HC-56A2]
gi|395962187|gb|EJH72487.1| SUA5 domain protein [Vibrio cholerae HC-57A2]
gi|395965267|gb|EJH75442.1| SUA5 domain protein [Vibrio cholerae HC-42A1]
gi|395976453|gb|EJH85899.1| SUA5 domain protein [Vibrio cholerae CP1030(3)]
gi|408014405|gb|EKG52044.1| SUA5 domain protein [Vibrio cholerae HC-50A1]
gi|408025401|gb|EKG62459.1| SUA5 domain protein [Vibrio cholerae HC-56A1]
gi|408035241|gb|EKG71715.1| SUA5 domain protein [Vibrio cholerae HC-57A1]
gi|408035709|gb|EKG72166.1| SUA5 domain protein [Vibrio cholerae CP1040(13)]
gi|408044001|gb|EKG79957.1| SUA5 domain protein [Vibrio Cholerae CP1044(17)]
gi|408045259|gb|EKG81108.1| SUA5 domain protein [Vibrio cholerae CP1050(23)]
gi|408055904|gb|EKG90807.1| SUA5 domain protein [Vibrio cholerae HC-81A2]
gi|408625943|gb|EKK98835.1| SUA5 domain protein [Vibrio cholerae CP1035(8)]
gi|408626017|gb|EKK98905.1| SUA5 domain protein [Vibrio cholerae HC-17A1]
gi|408636157|gb|EKL08324.1| SUA5 domain protein [Vibrio cholerae HC-55C2]
gi|408638941|gb|EKL10801.1| SUA5 domain protein [Vibrio cholerae HC-50A2]
gi|408657036|gb|EKL28127.1| SUA5 domain protein [Vibrio cholerae HC-77A1]
gi|408660445|gb|EKL31462.1| SUA5 domain protein [Vibrio cholerae HE-40]
gi|408665519|gb|EKL36332.1| SUA5 domain protein [Vibrio cholerae HE-46]
gi|408847228|gb|EKL87299.1| SUA5 domain protein [Vibrio cholerae HC-37A1]
gi|408848416|gb|EKL88464.1| SUA5 domain protein [Vibrio cholerae HC-17A2]
gi|408853965|gb|EKL93744.1| SUA5 domain protein [Vibrio cholerae HC-02C1]
gi|408868911|gb|EKM08218.1| SUA5 domain protein [Vibrio cholerae HC-59B1]
gi|408871990|gb|EKM11217.1| SUA5 domain protein [Vibrio cholerae HC-62B1]
gi|443432486|gb|ELS75014.1| SUA5 domain protein [Vibrio cholerae HC-64A1]
gi|443436116|gb|ELS82239.1| SUA5 domain protein [Vibrio cholerae HC-65A1]
gi|443439904|gb|ELS89600.1| SUA5 domain protein [Vibrio cholerae HC-67A1]
gi|443444002|gb|ELS97284.1| SUA5 domain protein [Vibrio cholerae HC-68A1]
gi|443447612|gb|ELT04254.1| SUA5 domain protein [Vibrio cholerae HC-71A1]
gi|443450550|gb|ELT10825.1| SUA5 domain protein [Vibrio cholerae HC-72A2]
gi|443454735|gb|ELT18535.1| SUA5 domain protein [Vibrio cholerae HC-78A1]
gi|443458146|gb|ELT25542.1| SUA5 domain protein [Vibrio cholerae HC-7A1]
Length = 321
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 10 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 69
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 70 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 126
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 127 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 185
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 186 S-KPFRVLRAG 195
>gi|418354937|ref|ZP_12957658.1| SUA5 domain protein [Vibrio cholerae HC-61A1]
gi|356453339|gb|EHI06002.1| SUA5 domain protein [Vibrio cholerae HC-61A1]
Length = 313
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 2 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 61
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 62 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 118
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 119 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 177
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 178 S-KPFRVLRAG 187
>gi|254225478|ref|ZP_04919088.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|125621948|gb|EAZ50272.1| conserved hypothetical protein [Vibrio cholerae V51]
Length = 329
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 18 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 77
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 78 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 135 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 193
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 194 S-KPFRVLRAG 203
>gi|254291504|ref|ZP_04962295.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|150422568|gb|EDN14524.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 328
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 18 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 77
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 78 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 135 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 193
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 194 S-KPFRVLRAG 203
>gi|384424235|ref|YP_005633593.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae LMA3984-4]
gi|327483788|gb|AEA78195.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae LMA3984-4]
Length = 322
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 11 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 70
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 71 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 127
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 128 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 186
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 187 S-KPFRVLRAG 196
>gi|452206926|ref|YP_007487048.1| threonylcarbamoyl-AMP synthase YrdC [Natronomonas moolapensis
8.8.11]
gi|452083026|emb|CCQ36309.1| threonylcarbamoyl-AMP synthase YrdC [Natronomonas moolapensis
8.8.11]
Length = 197
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 104/196 (53%), Gaps = 8/196 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A+ A++ G ++ PT+T+YG DA EA+ R++E KGR PL++ + +++ +
Sbjct: 8 DAVAAIRRGDLVVYPTETVYGLGVDALDPEAIERVFEAKGRSRHKPLSMALPELAAAADY 67
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A + LPGPVTV++ R E + L G + +G+R+PD + R +AR
Sbjct: 68 ARMTERERRFCERFLPGPVTVLVERTE--RVPDVLVDGGDRVGIRLPDHDTARALARRT- 124
Query: 149 SALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
+ TSAN +G+PS+ V + + A V DGG P STVVD++ +I+R
Sbjct: 125 GPITATSANRSGEPSARRVDEIDAAIRERATVLDGGETPG--TESTVVDVS---AGRIVR 179
Query: 209 PGSAKEETIAILEKHS 224
G +E A L + S
Sbjct: 180 RGELADEIEAWLAEAS 195
>gi|229525692|ref|ZP_04415097.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae bv. albensis
VL426]
gi|229339273|gb|EEO04290.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae bv. albensis
VL426]
Length = 329
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 18 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 77
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 78 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 135 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 193
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 194 S-KPFRVLRAG 203
>gi|153824989|ref|ZP_01977656.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149741501|gb|EDM55531.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 329
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 18 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 77
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 78 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 135 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 193
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 194 S-KPFRVLRAG 203
>gi|417824149|ref|ZP_12470740.1| SUA5 domain protein [Vibrio cholerae HE48]
gi|419835940|ref|ZP_14359383.1| SUA5 domain protein [Vibrio cholerae HC-46B1]
gi|421353855|ref|ZP_15804187.1| SUA5 domain protein [Vibrio cholerae HE-45]
gi|422922334|ref|ZP_16955523.1| SUA5 domain protein [Vibrio cholerae BJG-01]
gi|423734487|ref|ZP_17707699.1| SUA5 domain protein [Vibrio cholerae HC-41B1]
gi|424008771|ref|ZP_17751718.1| SUA5 domain protein [Vibrio cholerae HC-44C1]
gi|340047834|gb|EGR08757.1| SUA5 domain protein [Vibrio cholerae HE48]
gi|341646481|gb|EGS70594.1| SUA5 domain protein [Vibrio cholerae BJG-01]
gi|395952980|gb|EJH63593.1| SUA5 domain protein [Vibrio cholerae HE-45]
gi|408630788|gb|EKL03360.1| SUA5 domain protein [Vibrio cholerae HC-41B1]
gi|408857805|gb|EKL97484.1| SUA5 domain protein [Vibrio cholerae HC-46B1]
gi|408865166|gb|EKM04575.1| SUA5 domain protein [Vibrio cholerae HC-44C1]
Length = 321
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 10 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 69
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 70 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 126
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 127 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 185
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 186 S-KPFRVLRAG 195
>gi|229515463|ref|ZP_04404922.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae TMA 21]
gi|229347232|gb|EEO12192.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae TMA 21]
Length = 328
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 18 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 77
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 78 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 135 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 193
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 194 S-KPFRVLRAG 203
>gi|15641092|ref|NP_230724.1| hypothetical protein VC1079 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121587076|ref|ZP_01676853.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121726330|ref|ZP_01679620.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147673908|ref|YP_001216548.1| hypothetical protein VC0395_A0598 [Vibrio cholerae O395]
gi|153213572|ref|ZP_01948862.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153816970|ref|ZP_01969637.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153821905|ref|ZP_01974572.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227081253|ref|YP_002809804.1| hypothetical protein VCM66_1035 [Vibrio cholerae M66-2]
gi|227117445|ref|YP_002819341.1| hypothetical protein VC395_1094 [Vibrio cholerae O395]
gi|229511006|ref|ZP_04400485.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae B33]
gi|229518127|ref|ZP_04407571.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae RC9]
gi|229608343|ref|YP_002878991.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae MJ-1236]
gi|254848208|ref|ZP_05237558.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|298498815|ref|ZP_07008622.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|360034982|ref|YP_004936745.1| hypothetical protein Vch1786_I0583 [Vibrio cholerae O1 str.
2010EL-1786]
gi|379740903|ref|YP_005332872.1| hypothetical protein O3Y_05020 [Vibrio cholerae IEC224]
gi|417813109|ref|ZP_12459766.1| SUA5 domain protein [Vibrio cholerae HC-49A2]
gi|417820501|ref|ZP_12467115.1| SUA5 domain protein [Vibrio cholerae HE39]
gi|418332120|ref|ZP_12943056.1| SUA5 domain protein [Vibrio cholerae HC-06A1]
gi|418336866|ref|ZP_12945764.1| SUA5 domain protein [Vibrio cholerae HC-23A1]
gi|418348534|ref|ZP_12953268.1| SUA5 domain protein [Vibrio cholerae HC-43A1]
gi|419825583|ref|ZP_14349087.1| SUA5 domain protein [Vibrio cholerae CP1033(6)]
gi|419829660|ref|ZP_14353146.1| SUA5 domain protein [Vibrio cholerae HC-1A2]
gi|419832632|ref|ZP_14356094.1| SUA5 domain protein [Vibrio cholerae HC-61A2]
gi|421320702|ref|ZP_15771259.1| SUA5 domain protein [Vibrio cholerae CP1038(11)]
gi|421324695|ref|ZP_15775221.1| SUA5 domain protein [Vibrio cholerae CP1041(14)]
gi|421328357|ref|ZP_15778871.1| SUA5 domain protein [Vibrio cholerae CP1042(15)]
gi|421334951|ref|ZP_15785418.1| SUA5 domain protein [Vibrio cholerae CP1048(21)]
gi|421338845|ref|ZP_15789280.1| SUA5 domain protein [Vibrio cholerae HC-20A2]
gi|421347008|ref|ZP_15797390.1| SUA5 domain protein [Vibrio cholerae HC-46A1]
gi|422906284|ref|ZP_16941117.1| SUA5 domain protein [Vibrio cholerae HC-70A1]
gi|422912873|ref|ZP_16947392.1| SUA5 domain protein [Vibrio cholerae HFU-02]
gi|422916845|ref|ZP_16951173.1| SUA5 domain protein [Vibrio cholerae HC-02A1]
gi|423155980|ref|ZP_17143084.1| SUA5 domain protein [Vibrio cholerae HC-32A1]
gi|423159808|ref|ZP_17146776.1| SUA5 domain protein [Vibrio cholerae HC-33A2]
gi|423164522|ref|ZP_17151283.1| SUA5 domain protein [Vibrio cholerae HC-48B2]
gi|423852845|ref|ZP_17719563.1| SUA5 domain protein [Vibrio cholerae HC-59A1]
gi|423880272|ref|ZP_17723168.1| SUA5 domain protein [Vibrio cholerae HC-60A1]
gi|423892347|ref|ZP_17726030.1| SUA5 domain protein [Vibrio cholerae HC-62A1]
gi|424015969|ref|ZP_17755810.1| SUA5 domain protein [Vibrio cholerae HC-55B2]
gi|424026637|ref|ZP_17766250.1| SUA5 domain protein [Vibrio cholerae HC-69A1]
gi|424601277|ref|ZP_18040430.1| SUA5 domain protein [Vibrio cholerae CP1047(20)]
gi|424610095|ref|ZP_18048949.1| SUA5 domain protein [Vibrio cholerae HC-39A1]
gi|424621666|ref|ZP_18060189.1| SUA5 domain protein [Vibrio cholerae HC-47A1]
gi|424636068|ref|ZP_18074083.1| SUA5 domain protein [Vibrio cholerae HC-55A1]
gi|443534837|ref|ZP_21100733.1| SUA5 domain protein [Vibrio cholerae HC-80A1]
gi|443538406|ref|ZP_21104261.1| SUA5 domain protein [Vibrio cholerae HC-81A1]
gi|9655547|gb|AAF94238.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548711|gb|EAX58760.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121631276|gb|EAX63649.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124115908|gb|EAY34728.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|126512557|gb|EAZ75151.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126520613|gb|EAZ77836.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146315791|gb|ABQ20330.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227009141|gb|ACP05353.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227012895|gb|ACP09105.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229344842|gb|EEO09816.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae RC9]
gi|229350971|gb|EEO15912.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae B33]
gi|229370998|gb|ACQ61421.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae MJ-1236]
gi|254843913|gb|EET22327.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297543148|gb|EFH79198.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|340038132|gb|EGQ99106.1| SUA5 domain protein [Vibrio cholerae HE39]
gi|340042413|gb|EGR03378.1| SUA5 domain protein [Vibrio cholerae HC-49A2]
gi|341623978|gb|EGS49494.1| SUA5 domain protein [Vibrio cholerae HC-70A1]
gi|341638796|gb|EGS63434.1| SUA5 domain protein [Vibrio cholerae HC-02A1]
gi|341639698|gb|EGS64309.1| SUA5 domain protein [Vibrio cholerae HFU-02]
gi|356419532|gb|EHH73079.1| SUA5 domain protein [Vibrio cholerae HC-06A1]
gi|356432444|gb|EHH85641.1| SUA5 domain protein [Vibrio cholerae HC-23A1]
gi|356442280|gb|EHH95142.1| SUA5 domain protein [Vibrio cholerae HC-32A1]
gi|356447273|gb|EHI00064.1| SUA5 domain protein [Vibrio cholerae HC-43A1]
gi|356448924|gb|EHI01684.1| SUA5 domain protein [Vibrio cholerae HC-33A2]
gi|356455731|gb|EHI08367.1| SUA5 domain protein [Vibrio cholerae HC-48B2]
gi|356646136|gb|AET26191.1| conserved hypothetical protein [Vibrio cholerae O1 str.
2010EL-1786]
gi|378794413|gb|AFC57884.1| hypothetical protein O3Y_05020 [Vibrio cholerae IEC224]
gi|395920365|gb|EJH31187.1| SUA5 domain protein [Vibrio cholerae CP1041(14)]
gi|395923684|gb|EJH34495.1| SUA5 domain protein [Vibrio cholerae CP1038(11)]
gi|395929863|gb|EJH40612.1| SUA5 domain protein [Vibrio cholerae CP1042(15)]
gi|395936812|gb|EJH47535.1| SUA5 domain protein [Vibrio cholerae CP1048(21)]
gi|395943793|gb|EJH54467.1| SUA5 domain protein [Vibrio cholerae HC-20A2]
gi|395946068|gb|EJH56732.1| SUA5 domain protein [Vibrio cholerae HC-46A1]
gi|395972805|gb|EJH82380.1| SUA5 domain protein [Vibrio cholerae HC-47A1]
gi|395978219|gb|EJH87609.1| SUA5 domain protein [Vibrio cholerae CP1047(20)]
gi|408008706|gb|EKG46665.1| SUA5 domain protein [Vibrio cholerae HC-39A1]
gi|408025905|gb|EKG62942.1| SUA5 domain protein [Vibrio cholerae HC-55A1]
gi|408609664|gb|EKK83040.1| SUA5 domain protein [Vibrio cholerae CP1033(6)]
gi|408621245|gb|EKK94248.1| SUA5 domain protein [Vibrio cholerae HC-1A2]
gi|408642609|gb|EKL14353.1| SUA5 domain protein [Vibrio cholerae HC-60A1]
gi|408643571|gb|EKL15291.1| SUA5 domain protein [Vibrio cholerae HC-59A1]
gi|408651276|gb|EKL22532.1| SUA5 domain protein [Vibrio cholerae HC-61A2]
gi|408658390|gb|EKL29460.1| SUA5 domain protein [Vibrio cholerae HC-62A1]
gi|408861235|gb|EKM00831.1| SUA5 domain protein [Vibrio cholerae HC-55B2]
gi|408880418|gb|EKM19343.1| SUA5 domain protein [Vibrio cholerae HC-69A1]
gi|443461988|gb|ELT33043.1| SUA5 domain protein [Vibrio cholerae HC-80A1]
gi|443465995|gb|ELT40654.1| SUA5 domain protein [Vibrio cholerae HC-81A1]
Length = 329
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 18 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 77
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 78 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 135 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 193
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 194 S-KPFRVLRAG 203
>gi|424590320|ref|ZP_18029757.1| SUA5 domain protein [Vibrio cholerae CP1037(10)]
gi|408034868|gb|EKG71351.1| SUA5 domain protein [Vibrio cholerae CP1037(10)]
Length = 321
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 10 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 69
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 70 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 126
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 127 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 185
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 186 S-KPFRVLRSG 195
>gi|255745495|ref|ZP_05419443.1| YrdC family protein [Vibrio cholera CIRS 101]
gi|262158430|ref|ZP_06029546.1| YrdC family protein [Vibrio cholerae INDRE 91/1]
gi|262170292|ref|ZP_06037979.1| YrdC family protein [Vibrio cholerae RC27]
gi|440709351|ref|ZP_20890008.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae 4260B]
gi|449056418|ref|ZP_21735086.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae O1 str. Inaba
G4222]
gi|255736570|gb|EET91967.1| YrdC family protein [Vibrio cholera CIRS 101]
gi|262021307|gb|EEY40021.1| YrdC family protein [Vibrio cholerae RC27]
gi|262029871|gb|EEY48519.1| YrdC family protein [Vibrio cholerae INDRE 91/1]
gi|439974940|gb|ELP51076.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae 4260B]
gi|448264241|gb|EMB01480.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae O1 str. Inaba
G4222]
Length = 322
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 11 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 70
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 71 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 127
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 128 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 186
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 187 S-KPFRVLRAG 196
>gi|83815217|ref|YP_445718.1| SUA5 protein [Salinibacter ruber DSM 13855]
gi|83756611|gb|ABC44724.1| SUA5 protein [Salinibacter ruber DSM 13855]
Length = 330
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 6/191 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA L+ G+++A PT+T+YG DA +AV RI+E KGR +PL + + I +
Sbjct: 26 EAADRLRRGELVAFPTETVYGLGADAFQPDAVRRIFEAKGRPADNPLIVHLRRRDQIGQV 85
Query: 89 AV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A + LLD+ PGP+T++L + E +L + GLE++GVRVP +
Sbjct: 86 AARVPSVAQHLLDAFAPGPLTLILPKHE--DLPSVVTAGLETVGVRVPRLPLTQSFLEAC 143
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
++ + SAN +G+PS S + E +L R C+ GG +G STVVD T +
Sbjct: 144 DTPVPAPSANRSGRPSPTSWEAVEHDLAGRIDCILQGGRTDAG-VESTVVDCT-TDPATV 201
Query: 207 LRPGSAKEETI 217
LRPG+ E++
Sbjct: 202 LRPGAVSVESL 212
>gi|375089108|ref|ZP_09735444.1| Sua5/YciO/YrdC/YwlC family protein [Dolosigranulum pigrum ATCC
51524]
gi|374560909|gb|EHR32262.1| Sua5/YciO/YrdC/YwlC family protein [Dolosigranulum pigrum ATCC
51524]
Length = 331
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A Q L++ +V+A PT+T+YG DA SS+A+ IY+ KGR +PL + + S +
Sbjct: 12 DRAAQLLQSEEVVAFPTETVYGLGADATSSQAIQGIYQAKGRPSDNPLIVHIAQRSQL-- 69
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+T ++P L+D PGP+T++L+ + + + GL +IG+R+PD +
Sbjct: 70 MELTTYVPPKAQQLMDQFWPGPLTIILNVKRQA-VAPEVTAGLATIGIRMPDHPLALELI 128
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
R + +A S+N +G+PS + + ++L + A V DGG G STV+DLT
Sbjct: 129 RQVGRPIAAPSSNTSGKPSPTTAQHVMDDLAGKIAAVVDGGETGVGLE-STVIDLTSEVP 187
Query: 204 FKILRPGSAKEETI 217
ILRPG E I
Sbjct: 188 -TILRPGGVSAEEI 200
>gi|260888151|ref|ZP_05899414.1| SUA5 protein [Selenomonas sputigena ATCC 35185]
gi|260862180|gb|EEX76680.1| SUA5 protein [Selenomonas sputigena ATCC 35185]
Length = 377
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 108/201 (53%), Gaps = 6/201 (2%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
V P T A EEA+ L+ G+V+A PT+T+YG + + A +IYE KGR +PL +
Sbjct: 8 VLPPTAAAIEEAVHLLRAGEVVAFPTETVYGLGANGFDAAACAKIYEAKGRPSDNPLILH 67
Query: 79 VGDVSDINRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
+ + ++ A+ + LL + PGP+T+VL R + + + GL ++GVR+P++
Sbjct: 68 IAHRAMLDEVALDVPEMAEHLLAAFAPGPLTLVLRR--CAAVPDRITGGLATVGVRMPEN 125
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVV 196
+ + R LA SAN +G+PS + + E+L R + DGG G ST+V
Sbjct: 126 DAALALIRAAGFPLAAPSANTSGRPSPTTAETVLEDLAGRIPLILDGGPCRFG-VESTIV 184
Query: 197 DLTRLGKFKILRPGSAKEETI 217
D+T ILRPG+ E +
Sbjct: 185 DVTGEAAV-ILRPGAITREML 204
>gi|163867863|ref|YP_001609067.1| hypothetical protein Btr_0635 [Bartonella tribocorum CIP 105476]
gi|161017514|emb|CAK01072.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 320
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 4/200 (2%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+RP +EAI L+ G+++A+PT+T+YG A DA + A++ I+ K R +PL
Sbjct: 3 IRPLNSVSIKEAITLLEQGRLVALPTETVYGLAGDATNGRALSSIFSTKKRPQFNPLIAH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + R+ D L L++ PGP+T+VL + N+ GL+++ +R PDS
Sbjct: 63 VNGIEMAERYVEIDFLSRRLMEVFWPGPLTLVLPLKKQHNIHPLTTAGLDTLAIRFPDSR 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F ++ + L LA SAN +G+ S S + F +L E + DGG G ST++
Sbjct: 123 FAEIV-QCLGRPLAAPSANQSGRLSPTSAEAVFTSLGESVPLILDGGPAKIGLE-STIIK 180
Query: 198 LTRLGKFKILRPGSAKEETI 217
+ + +LRPG + I
Sbjct: 181 ICG-ERIYLLRPGGLAADKI 199
>gi|229520488|ref|ZP_04409913.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae TM 11079-80]
gi|297578682|ref|ZP_06940610.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|229342586|gb|EEO07579.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae TM 11079-80]
gi|297536276|gb|EFH75109.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 329
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 18 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 77
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 78 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 135 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 193
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 194 S-KPFRVLRAG 203
>gi|378825141|ref|YP_005187873.1| hypothetical protein SFHH103_00548 [Sinorhizobium fredii HH103]
gi|365178193|emb|CCE95048.1| conserved hypothetical protein [Sinorhizobium fredii HH103]
Length = 324
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 4/184 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A L G+ +A+PT+T+YG A DA +++A++RIYE+KGR +PL V D++
Sbjct: 16 ERACAVLSEGEPVAIPTETVYGLAADATNADAISRIYEMKGRPRFNPLICHVSDMAMAEA 75
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ D + L ++ PGP+T++L S + + GLE++G+R+P+ RVI+
Sbjct: 76 HVIFDPISRRLAEAFWPGPLTLILPERRESTVHALASAGLETLGIRMPEGFSRRVISH-F 134
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G+ S S E +L + + D G G ST++ + G+ ++
Sbjct: 135 GRPLAAPSANTSGRISPTSAAHVEADLGAKLRLILDAGPAEIGLE-STIIKV-EAGRLRL 192
Query: 207 LRPG 210
LRPG
Sbjct: 193 LRPG 196
>gi|153828152|ref|ZP_01980819.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148876394|gb|EDL74529.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 329
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 18 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 77
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 78 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 135 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 193
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 194 S-KPFRVLRAG 203
>gi|390457267|ref|ZP_10242795.1| hypothetical protein PpeoK3_24909 [Paenibacillus peoriae KCTC 3763]
Length = 439
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 120/231 (51%), Gaps = 21/231 (9%)
Query: 10 VSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGR 69
+S E G R A E EA + L+ G+ IA PT+T+YG DA S+ AV ++ KGR
Sbjct: 83 ISGEMGGGQTRIAAEKGIREAAELLQAGETIAFPTETVYGLGADARSTAAVEAVFAAKGR 142
Query: 70 KHTSPLAICVGD-------VSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKS 122
+PL + + D V++IN A L+D+ PGP+T+VL + L
Sbjct: 143 PSDNPLIVHISDPVQLSGMVANINDTA------RALMDAFWPGPLTLVLPVVPQA-LSPR 195
Query: 123 LNPGLESIGVRVPDSNF-VRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACV 180
+ GL+++GVR+PD +R+IA LA SAN +G+PS + E+L R +
Sbjct: 196 VTAGLDTVGVRMPDHPIALRLIAEA-GCPLAAPSANRSGRPSPTLAQHVQEDLGGRIGGI 254
Query: 181 YDGGVLPSGRA-GSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVEEPA 230
DGG P+G STVV G ILRPG E +A + + ++V +PA
Sbjct: 255 LDGG--PTGVGLESTVVQAGDDGTVTILRPGGVTAEQLAAVAR-AVVLDPA 302
>gi|229505324|ref|ZP_04394834.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae BX 330286]
gi|229357547|gb|EEO22464.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae BX 330286]
Length = 336
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 25 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 84
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 85 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 141
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 142 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 200
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 201 S-KPFRVLRAG 210
>gi|405378903|ref|ZP_11032812.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium sp. CF142]
gi|397324505|gb|EJJ28861.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium sp. CF142]
Length = 324
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 106/206 (51%), Gaps = 5/206 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E AL G IA+PT+T+YG A DA + A+ RIYE KGR +PL + D++
Sbjct: 16 EAGCAALAEGFAIAIPTETVYGLAADATNPAAITRIYETKGRPRFNPLICHMADLAMAET 75
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+A D + L ++ PGP+T+VL + + GL+S+G+R+P F + R
Sbjct: 76 YAEFDPISRALAETFWPGPLTLVLPLKSGTAIHALATAGLDSVGIRIP-KGFTGDLIRAF 134
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G+ S+ S E +L + + D G G ST+V + G+ ++
Sbjct: 135 GRPLAAPSANTSGKVSATSAAHVEVDLGAKIPLILDAGASAVG-VESTIVKVEN-GELRL 192
Query: 207 LRPGSAKEETIA-ILEKHSLVEEPAA 231
LRPG + I ++ KH L + AA
Sbjct: 193 LRPGGLPVKEIERVVGKHLLRSKKAA 218
>gi|330840018|ref|YP_004414598.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas sputigena ATCC
35185]
gi|329747782|gb|AEC01139.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas sputigena ATCC
35185]
Length = 375
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 108/201 (53%), Gaps = 6/201 (2%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
V P T A EEA+ L+ G+V+A PT+T+YG + + A +IYE KGR +PL +
Sbjct: 6 VLPPTAAAIEEAVHLLRAGEVVAFPTETVYGLGANGFDAAACAKIYEAKGRPSDNPLILH 65
Query: 79 VGDVSDINRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
+ + ++ A+ + LL + PGP+T+VL R + + + GL ++GVR+P++
Sbjct: 66 IAHRAMLDEVALDVPEMAEHLLAAFAPGPLTLVLRR--CAAVPDRITGGLATVGVRMPEN 123
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVV 196
+ + R LA SAN +G+PS + + E+L R + DGG G ST+V
Sbjct: 124 DAALALIRAAGFPLAAPSANTSGRPSPTTAETVLEDLAGRIPLILDGGPCRFG-VESTIV 182
Query: 197 DLTRLGKFKILRPGSAKEETI 217
D+T ILRPG+ E +
Sbjct: 183 DVTGEAAV-ILRPGAITREML 202
>gi|294507611|ref|YP_003571669.1| SUA5 protein [Salinibacter ruber M8]
gi|294343940|emb|CBH24718.1| SUA5 protein [Salinibacter ruber M8]
Length = 412
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 6/191 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA L+ G+++A PT+T+YG DA +AV RI+E KGR +PL + + I +
Sbjct: 108 EAADRLRRGELVAFPTETVYGLGADAFQPDAVRRIFEAKGRPADNPLIVHLRRRDQIGQV 167
Query: 89 AV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A + LLD+ PGP+T++L + E +L + GLE++GVRVP +
Sbjct: 168 AARVPSVAQHLLDAFAPGPLTLILPKHE--DLPSVVTAGLETVGVRVPRLPLTQSFLEAC 225
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
++ + SAN +G+PS S + E +L R C+ GG +G STVVD T +
Sbjct: 226 DTPVPAPSANRSGRPSPTSWEAVEHDLAGRIDCILQGGRTDAG-VESTVVDCT-TDPATV 283
Query: 207 LRPGSAKEETI 217
LRPG+ E++
Sbjct: 284 LRPGAVSVESL 294
>gi|262165359|ref|ZP_06033096.1| YrdC family protein [Vibrio mimicus VM223]
gi|262025075|gb|EEY43743.1| YrdC family protein [Vibrio mimicus VM223]
Length = 329
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + G
Sbjct: 18 TPADIECAAQLLKQGQLVAIPTETVYGLAADASQPEAVKQIFSAKGRPANHPLIVHFGSA 77
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
I +A TD P + L ++ PGP+T++L + E ++ + GLE++G+RVP +
Sbjct: 78 EQIAEWA-TDVAPEAYQLAEAFWPGPLTMLLPKAE--HVSPVVTGGLETVGLRVPAHPVL 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L + A V DGG G ST+VDLT
Sbjct: 135 LEILKAHHLAVAAPSANPYKKLSPTSAQQVLDGLNGKLAAVLDGGECQHGLE-STIVDLT 193
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 194 S-KPFRVLRAG 203
>gi|258626302|ref|ZP_05721149.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258581354|gb|EEW06256.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 322
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + G
Sbjct: 11 TPADIECAAQLLKQGQLVAIPTETVYGLAADASQPEAVKQIFSAKGRPANHPLIVHFGSA 70
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
I +A TD P + L ++ PGP+T++L + E ++ + GLE++G+RVP +
Sbjct: 71 EQIAEWA-TDVAPEAYQLAEAFWPGPLTMLLPKAE--HVSPVVTGGLETVGLRVPAHPVL 127
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L + A V DGG G ST+VDLT
Sbjct: 128 LEILKAHHLAVAAPSANPYKKLSPTSAQQVLDGLNGKLAAVLDGGECQHGLE-STIVDLT 186
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 187 S-KPFRVLRAG 196
>gi|229917062|ref|YP_002885708.1| Sua5/YciO/YrdC/YwlC family protein [Exiguobacterium sp. AT1b]
gi|229468491|gb|ACQ70263.1| Sua5/YciO/YrdC/YwlC family protein [Exiguobacterium sp. AT1b]
Length = 336
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 115/200 (57%), Gaps = 15/200 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EE ++ L+ G++IA+PT+T+YG A DA + A+ +I+E KGR +PL + + + +
Sbjct: 12 EEGVRLLQAGEIIAMPTETVYGLAGDAMNDVAIRKIFEAKGRPSDNPLIVHIASIEQTSL 71
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVL-SRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
F D +P L+D+ PG +T++L S G +S+L + GL+SIG+R+P+ +
Sbjct: 72 F--VDSIPPVAKRLMDAFWPGALTIILPSNGRASSL---VTAGLDSIGLRMPNHPAALEL 126
Query: 144 ARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSG-RAGSTVVDLTRL 201
R LA SAN +G+PS + + ++L R A + DGG P+G STVVD T
Sbjct: 127 IRKSGLGLAAPSANRSGRPSPTTAQHVADDLNGRIAGIVDGG--PTGIGVESTVVDCTG- 183
Query: 202 GKFKILRPGS-AKEETIAIL 220
ILRPG +EE A++
Sbjct: 184 DTVTILRPGGVTREEMEAVI 203
>gi|319405355|emb|CBI78972.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 320
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 4/205 (1%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P A +A+ L+ G+++A+PT+T+YG A DA + +AV I+ KGR +PL +
Sbjct: 3 ILPFNSAAINQAVTILQQGQLVALPTETVYGLAGDATNGKAVASIFSTKGRPFFNPLIVH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V D+ + D L L+++ PGP+TVVL N+ GL ++ VR P
Sbjct: 63 VSDIVMAECYVKIDFLSRRLMEAFWPGPLTVVLPLKAHHNIHPLTTAGLNTLAVRFPKGG 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVS-VKDFENLWERCACVYDGGVLPSGRAGSTVVD 197
F VI R LA SAN +G+ S S + F++L + DGG G ST++
Sbjct: 123 FAEVI-RHFGRPLAAPSANQSGKLSPTSAISVFKSLGTLVPLIIDGGASKIGLE-STIIK 180
Query: 198 LTRLGKFKILRPGSAKEETIAILEK 222
+ + +LRPG E IA + K
Sbjct: 181 ICDENVY-LLRPGGLAIEEIAKVAK 204
>gi|448342310|ref|ZP_21531262.1| Sua5/YciO/YrdC/YwlC family protein [Natrinema gari JCM 14663]
gi|445626301|gb|ELY79650.1| Sua5/YciO/YrdC/YwlC family protein [Natrinema gari JCM 14663]
Length = 195
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 7/197 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A+++G ++ PT+T+YG A E V RI+E+KGR T PL+ V V +
Sbjct: 5 DRAADAIESGALVVYPTETVYGLGGAALEPEPVERIFEVKGRDRTKPLSFAVPSVPSALQ 64
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ + + LPGPVTV+ R + + L G E +GVR+PD++ +
Sbjct: 65 YVRATDRERRFMATFLPGPVTVLCRR--RAAVPDELTAGRERVGVRIPDNDLALALCERA 122
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ + TSAN++G+ S+ + D + + E A V DGG G STVVD++ I
Sbjct: 123 GTPITATSANVSGRESARRLDDLDPEIREAAAVVLDGGRTDGG-TESTVVDVS---SGTI 178
Query: 207 LRPGSAKEETIAILEKH 223
R G+ +E A LE+H
Sbjct: 179 HRRGAQADEIDAWLERH 195
>gi|329768870|ref|ZP_08260298.1| hypothetical protein HMPREF0433_00062 [Gemella sanguinis M325]
gi|328837233|gb|EGF86870.1| hypothetical protein HMPREF0433_00062 [Gemella sanguinis M325]
Length = 343
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 103/188 (54%), Gaps = 4/188 (2%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA-V 90
Q K+ K++A+PT+T+YG + DA S +A+++IYE KGR +PL + DV ++
Sbjct: 23 QYYKSDKLVAIPTETVYGLSADATSDKAISKIYEAKGRPSDNPLIVHFYDVKQLDNIVDY 82
Query: 91 TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA 150
D L+D PGP+T++L+ E++ + ++ GL ++ VR+P + R I + +
Sbjct: 83 ADDRVGILIDKFWPGPMTLILNAIENNGISNNVTAGLNTLAVRMPSNTTAREILKETQVL 142
Query: 151 LALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRP 209
LA SAN +G+PS + + +L E+ + + G STV+D T+ I RP
Sbjct: 143 LAAPSANTSGKPSPTKYEHVYHDLNEKIDVIIEDEQSDIG-LESTVIDCTK-NPLVIARP 200
Query: 210 GSAKEETI 217
G +E I
Sbjct: 201 GEITKEDI 208
>gi|392970036|ref|ZP_10335445.1| putative Sua5 family translation factor [Staphylococcus equorum
subsp. equorum Mu2]
gi|403046015|ref|ZP_10901490.1| translation factor [Staphylococcus sp. OJ82]
gi|392511964|emb|CCI58652.1| putative Sua5 family translation factor [Staphylococcus equorum
subsp. equorum Mu2]
gi|402764177|gb|EJX18264.1| translation factor [Staphylococcus sp. OJ82]
Length = 347
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 111/200 (55%), Gaps = 7/200 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
E + G +IA+PT+T+YG DA ++EA+ +IYE KGR +PL + + D+ I F
Sbjct: 23 EIKHIFEQGGLIAIPTETVYGLGADARNAEAIKKIYEAKGRPSDNPLIVHIHDLKQIEHF 82
Query: 89 A--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+TD + L+ PGP++ +L + L +S++ GL SI VR+P + R I +
Sbjct: 83 THDITDEI-KLLMKHFWPGPISFILPI-KKGYLCESVSGGLSSIAVRMPSHSIGRQILQF 140
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
++ +A SANL+G+PS + + + +L R + +G G STV+D T+ F+
Sbjct: 141 VDIPIAAPSANLSGRPSPTTFEHVYSDLNGRINGMVNGDQSEEGLE-STVLDCTQF-PFR 198
Query: 206 ILRPGSAKEETIAILEKHSL 225
I RPGS + I + HS+
Sbjct: 199 IARPGSITKPMIEAVLPHSV 218
>gi|331002522|ref|ZP_08326040.1| hypothetical protein HMPREF0491_00902 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330410338|gb|EGG89772.1| hypothetical protein HMPREF0491_00902 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 366
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 106/196 (54%), Gaps = 8/196 (4%)
Query: 25 AHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSD 84
A +EA +++G ++A PT+T+YG +A SEA +IY KGR +PL + + D
Sbjct: 23 ADIKEAADIIRSGGLVAFPTETVYGLGANALMSEAAKKIYAAKGRPSDNPLIVHISKTED 82
Query: 85 INRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+N A + + L + PGP+TVVL + S + + GL+++ VR+PD+N R +
Sbjct: 83 VNNIAREIPEIFYKLAECFWPGPMTVVLKK--RSIIPDDTSGGLDTVAVRLPDNNIARAL 140
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ +A SAN +G+PS F+++ R + DGG + G ST+VDLT G
Sbjct: 141 IEVSKVPIAAPSANTSGRPSPTRASHVFDDMDGRIDMIIDGGTVGIG-VESTIVDLT--G 197
Query: 203 KF-KILRPGSAKEETI 217
+LRPG+ E +
Sbjct: 198 DIPTLLRPGAVTFEML 213
>gi|239637409|ref|ZP_04678391.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus warneri L37603]
gi|239597009|gb|EEQ79524.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus warneri L37603]
Length = 347
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 105/184 (57%), Gaps = 5/184 (2%)
Query: 36 TGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT-DHL 94
G ++A+PT+T+YG DA + EAV+ IYE KGR +PL + + D+S +N F T +
Sbjct: 30 NGGLVALPTETVYGLGADATNQEAVSHIYEAKGRPSDNPLIVHIHDMSQMNDFVDTLEPK 89
Query: 95 PHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALT 154
L+++ PGP++ +L +S L + GL SI VR+P R + + ++ +A
Sbjct: 90 VQSLMEAFWPGPISFILPL-KSGYLCPKVTGGLNSIAVRMPSHPIGRSVLQHIDKPIAAP 148
Query: 155 SANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAK 213
SAN++G+PS + + F++L R + +G G STV+D T+ F+I RPGS
Sbjct: 149 SANISGRPSPTTFEHVFQDLNGRIDGIINGDQSEEGLE-STVLDCTQY-PFRIARPGSIT 206
Query: 214 EETI 217
++ I
Sbjct: 207 KKMI 210
>gi|383786621|ref|YP_005471190.1| translation factor SUA5 [Fervidobacterium pennivorans DSM 9078]
gi|383109468|gb|AFG35071.1| translation factor SUA5 [Fervidobacterium pennivorans DSM 9078]
Length = 333
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 6/184 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A LK G ++A PT+T+YG A + EAV +I+E+KGR +PL + + +N
Sbjct: 20 QYACDILKNGGLVAFPTETVYGLGACALNPEAVKKIFEVKGRPQDNPLIVHLASFEQVNE 79
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A + ++ L PGPVT VL + S + + GL+++GVR+P + +A+
Sbjct: 80 VAYVEEKYVNVIKRLTPGPVTFVLKK--KSIIPPEVTAGLDTVGVRIPAHPIAQRLAQ-C 136
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+A SANL+G+PS K E+L+ C+ D G G ST++DLT+ K +
Sbjct: 137 AGPIAAPSANLSGKPSPTDAKSVIEDLFGLVECIIDAGESAFG-IESTIIDLTK-EKPLV 194
Query: 207 LRPG 210
LRPG
Sbjct: 195 LRPG 198
>gi|301056793|ref|YP_003795004.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus biovar
anthracis str. CI]
gi|300378962|gb|ADK07866.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus biovar
anthracis str. CI]
Length = 346
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLHTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|167636681|ref|ZP_02394969.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. A0442]
gi|254744456|ref|ZP_05202136.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. Kruger
B]
gi|167527881|gb|EDR90703.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. A0442]
Length = 346
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLHTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTSTVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|170287882|ref|YP_001738120.1| Sua5/YciO/YrdC/YwlC family protein [Thermotoga sp. RQ2]
gi|170175385|gb|ACB08437.1| Sua5/YciO/YrdC/YwlC family protein [Thermotoga sp. RQ2]
Length = 335
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 104/192 (54%), Gaps = 6/192 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA++ L+ G+VI PT+T+YG DA + EA +I+E+KGR +PL + + +
Sbjct: 18 KEAVELLQNGEVIIFPTETVYGIGADAYNEEACKKIFELKGRPADNPLIVHIHSFEQLEE 77
Query: 88 FAVTDHLPH-GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A + PH L PGP+TV+L R +S + + GL ++ +R+P +
Sbjct: 78 IA-EGYEPHLDFLKKFWPGPLTVIL-RKKSEKIPPVVTAGLPTVAMRMPAHPVALKLIEL 135
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN++G+PS+ +VK E+ + + D G P G ST+VDLT+ K
Sbjct: 136 FGHPIAAPSANISGRPSATNVKHVVEDFMGKVKLIIDAGDTPFG-LESTIVDLTK-EKPV 193
Query: 206 ILRPGSAKEETI 217
+LRPG + E +
Sbjct: 194 LLRPGPVEVERL 205
>gi|405374103|ref|ZP_11028673.1| Sua5/YciO/YrdC/YwlC family protein [Chondromyces apiculatus DSM
436]
gi|397087115|gb|EJJ18177.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 203
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 101/193 (52%), Gaps = 10/193 (5%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H + A++ L+ G ++A PTDT +G CD S + + R+Y++KGR PL+ D+SD+
Sbjct: 17 HLQRAVEVLERGGLLAYPTDTYFGLGCDLSSKKGIERLYQLKGRDKKKPLSFLCPDLSDV 76
Query: 86 NRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLE-SIGVRVPDSNFVRVIA 144
R+A + + + L PG T +L E++ L L + +G+RVPDS VR +A
Sbjct: 77 ARYAHVSNFAYRTMKGLTPGAFTFIL---EATRLVPDLMMSKQKQVGIRVPDSPLVRELA 133
Query: 145 RGLESALALTSA-NLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
R L L TSA N G+P + KD + L + DGGV + STV+ L
Sbjct: 134 RALGRPLVTTSATNTEGEPLT-DAKDIKAELGHGLDLILDGGV--TLNEPSTVISLIG-D 189
Query: 203 KFKILRPGSAKEE 215
+ILR G + E
Sbjct: 190 SLEILRQGKGRLE 202
>gi|118480360|ref|YP_897511.1| translation factor SUA5 [Bacillus thuringiensis str. Al Hakam]
gi|196042389|ref|ZP_03109654.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus NVH0597-99]
gi|118419585|gb|ABK88004.1| translation factor SUA5 [Bacillus thuringiensis str. Al Hakam]
gi|196026781|gb|EDX65423.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus NVH0597-99]
Length = 346
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLHTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|228936610|ref|ZP_04099404.1| hypothetical protein bthur0009_50450 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228823045|gb|EEM68883.1| hypothetical protein bthur0009_50450 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 346
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLHTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|30265348|ref|NP_847725.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. Ames]
gi|47778411|ref|YP_022236.2| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49188160|ref|YP_031413.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. Sterne]
gi|49480413|ref|YP_039318.1| sua5/yciO/yrdC/ywlC family protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52140237|ref|YP_086594.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus E33L]
gi|65317301|ref|ZP_00390260.1| COG0009: Putative translation factor (SUA5) [Bacillus anthracis
str. A2012]
gi|165871252|ref|ZP_02215901.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. A0488]
gi|170688185|ref|ZP_02879396.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. A0465]
gi|170709376|ref|ZP_02899789.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. A0389]
gi|177651870|ref|ZP_02934453.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. A0174]
gi|206978500|ref|ZP_03239359.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus H3081.97]
gi|217962814|ref|YP_002341392.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus AH187]
gi|218906503|ref|YP_002454337.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus AH820]
gi|227818088|ref|YP_002818097.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. CDC
684]
gi|228917934|ref|ZP_04081470.1| hypothetical protein bthur0012_51350 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228930333|ref|ZP_04093337.1| hypothetical protein bthur0010_50120 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228949046|ref|ZP_04111318.1| hypothetical protein bthur0007_51670 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229094437|ref|ZP_04225509.1| hypothetical protein bcere0021_51420 [Bacillus cereus Rock3-42]
gi|229124829|ref|ZP_04254007.1| hypothetical protein bcere0016_51090 [Bacillus cereus 95/8201]
gi|229142067|ref|ZP_04270592.1| hypothetical protein bcere0013_51530 [Bacillus cereus BDRD-ST26]
gi|229199451|ref|ZP_04326114.1| hypothetical protein bcere0001_49500 [Bacillus cereus m1293]
gi|229600982|ref|YP_002869540.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. A0248]
gi|254686252|ref|ZP_05150111.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str.
CNEVA-9066]
gi|254724247|ref|ZP_05186031.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. A1055]
gi|254735253|ref|ZP_05192962.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. Western
North America USA6153]
gi|254755794|ref|ZP_05207826.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. Vollum]
gi|254762134|ref|ZP_05213980.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str.
Australia 94]
gi|375287349|ref|YP_005107788.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus NC7401]
gi|386739183|ref|YP_006212364.1| Sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. H9401]
gi|421509503|ref|ZP_15956408.1| Sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. UR-1]
gi|421640596|ref|ZP_16081177.1| Sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. BF1]
gi|423355806|ref|ZP_17333430.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus IS075]
gi|423375122|ref|ZP_17352459.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus AND1407]
gi|423571882|ref|ZP_17548119.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus MSX-A12]
gi|30260026|gb|AAP29211.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. Ames]
gi|47552116|gb|AAT34711.2| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49182087|gb|AAT57463.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. Sterne]
gi|49331969|gb|AAT62615.1| sua5/yciO/yrdC/ywlC family protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51973706|gb|AAU15256.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus E33L]
gi|164712919|gb|EDR18447.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. A0488]
gi|170125724|gb|EDS94638.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. A0389]
gi|170667878|gb|EDT18630.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. A0465]
gi|172082574|gb|EDT67638.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. A0174]
gi|206743290|gb|EDZ54738.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus H3081.97]
gi|217063465|gb|ACJ77715.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus AH187]
gi|218539161|gb|ACK91559.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus AH820]
gi|227004860|gb|ACP14603.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. CDC
684]
gi|228584027|gb|EEK42182.1| hypothetical protein bcere0001_49500 [Bacillus cereus m1293]
gi|228641356|gb|EEK97662.1| hypothetical protein bcere0013_51530 [Bacillus cereus BDRD-ST26]
gi|228658620|gb|EEL14282.1| hypothetical protein bcere0016_51090 [Bacillus cereus 95/8201]
gi|228688974|gb|EEL42801.1| hypothetical protein bcere0021_51420 [Bacillus cereus Rock3-42]
gi|228810619|gb|EEM56968.1| hypothetical protein bthur0007_51670 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228829319|gb|EEM74952.1| hypothetical protein bthur0010_50120 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228841731|gb|EEM86842.1| hypothetical protein bthur0012_51350 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|229265390|gb|ACQ47027.1| sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. A0248]
gi|358355876|dbj|BAL21048.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus NC7401]
gi|384389034|gb|AFH86695.1| Sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. H9401]
gi|401081831|gb|EJP90104.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus IS075]
gi|401092999|gb|EJQ01120.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus AND1407]
gi|401199306|gb|EJR06210.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus MSX-A12]
gi|401820480|gb|EJT19645.1| Sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. UR-1]
gi|403392275|gb|EJY89530.1| Sua5/yciO/yrdC/ywlC family protein [Bacillus anthracis str. BF1]
Length = 346
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLHTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|241889771|ref|ZP_04777069.1| SUA5 domain protein [Gemella haemolysans ATCC 10379]
gi|241863393|gb|EER67777.1| SUA5 domain protein [Gemella haemolysans ATCC 10379]
Length = 343
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 105/191 (54%), Gaps = 10/191 (5%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA-V 90
+ K GK++A+PT+T+YG + +A EAV++IYE KGR +PL + ++S ++
Sbjct: 23 EYYKRGKLVAIPTETVYGLSANAMDDEAVSKIYEAKGRPSDNPLIVHFYEMSQLDEIVDY 82
Query: 91 TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA 150
+D L+D PGP+T++L+ E++ + K + GL ++ VR+P + R I + E
Sbjct: 83 SDENVKKLIDKFWPGPMTLILNVKENNGISKKVTAGLNTLAVRMPSNVTARGILKETEIL 142
Query: 151 LALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAG----STVVDLTRLGKFKI 206
LA SAN +G+PS FE+++ D ++ ++ STV+D TR I
Sbjct: 143 LAAPSANTSGKPSPTK---FEHVYHDLNGKID-VIIEDEQSDIGLESTVIDCTRYP-LVI 197
Query: 207 LRPGSAKEETI 217
RPG +E I
Sbjct: 198 ARPGDITKEDI 208
>gi|300117839|ref|ZP_07055606.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus SJ1]
gi|298724703|gb|EFI65378.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus SJ1]
Length = 346
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLHTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|225867306|ref|YP_002752684.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus 03BB102]
gi|229187551|ref|ZP_04314691.1| hypothetical protein bcere0004_50840 [Bacillus cereus BGSC 6E1]
gi|376269239|ref|YP_005121951.1| hypothetical protein bcf_26725 [Bacillus cereus F837/76]
gi|225785999|gb|ACO26216.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus 03BB102]
gi|228595918|gb|EEK53598.1| hypothetical protein bcere0004_50840 [Bacillus cereus BGSC 6E1]
gi|364515039|gb|AEW58438.1| Hypothetical protein bcf_26725 [Bacillus cereus F837/76]
Length = 346
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKE--GISEKVTAGLHTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|429887289|ref|ZP_19368812.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae PS15]
gi|429225726|gb|EKY31937.1| Sua5 YciO YrdC YwlC family protein [Vibrio cholerae PS15]
Length = 322
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 104/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G ++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 11 TPADIECAAQLLKQGHLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 70
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 71 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 127
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 128 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 186
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 187 S-KPFRVLRAG 196
>gi|423573023|ref|ZP_17549142.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus MSX-D12]
gi|401216492|gb|EJR23204.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus MSX-D12]
Length = 346
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKE--GISEKVTAGLHTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|359410388|ref|ZP_09202853.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium sp. DL-VIII]
gi|357169272|gb|EHI97446.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium sp. DL-VIII]
Length = 349
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 104/189 (55%), Gaps = 7/189 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
EA +EA + +K G + PT+T+YG DA ++EAV +I++ KGR +PL I V
Sbjct: 15 EAKIKEAAELIKMGGTVVFPTETVYGLGADALNAEAVEKIFKAKGRPQDNPLIIHVAS-K 73
Query: 84 DINRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
DI +A + L++ PGP+T++L + E S N L+SIG+R+PD+ R
Sbjct: 74 DIELYAKEIPEVAKELINKFWPGPLTIILKKKEVIPSITSAN--LDSIGIRMPDNEIARK 131
Query: 143 IARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ + +A SAN++G+PS V+ E+L + C+ GG+ ST+VD T +
Sbjct: 132 LIELSNTTIAAPSANISGRPSPTDVQRCIEDLDGKVDCIL-GGIESDIGVESTIVDCTVI 190
Query: 202 GKFKILRPG 210
+LRPG
Sbjct: 191 PPV-VLRPG 198
>gi|423479475|ref|ZP_17456190.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG6X1-1]
gi|402425779|gb|EJV57925.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG6X1-1]
Length = 347
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKE--GISEKVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|317495537|ref|ZP_07953905.1| Sua5/YciO/YrdC/YwlC family protein [Gemella morbillorum M424]
gi|316914351|gb|EFV35829.1| Sua5/YciO/YrdC/YwlC family protein [Gemella morbillorum M424]
Length = 343
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 10/192 (5%)
Query: 31 IQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA- 89
I K K+IA+PT+T+YG + DA S EAV +IYE KGR +PL + +++ +N
Sbjct: 22 ITYYKDNKLIAIPTETVYGLSADATSDEAVCKIYEAKGRPSDNPLIVHFYEMNQLNDIVD 81
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
D L+++ PGP+T++L+ E++ + K ++ GL ++ VR+P + R I + +
Sbjct: 82 YQDERVDKLIENFWPGPMTLILNAKENNGISKKVSAGLSTLAVRMPSNKTARQILKETKV 141
Query: 150 ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAG----STVVDLTRLGKFK 205
LA SAN +G+PS FE+++ D ++ ++ STV+D TR
Sbjct: 142 LLAAPSANTSGKPSPTK---FEHVYHDLNGKID-VIIEDEQSDIGLESTVIDCTR-TPLV 196
Query: 206 ILRPGSAKEETI 217
I RPG +E I
Sbjct: 197 IARPGEITKEDI 208
>gi|423399833|ref|ZP_17377006.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG2X1-2]
gi|401656894|gb|EJS74407.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG2X1-2]
Length = 347
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|42784497|ref|NP_981744.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus ATCC 10987]
gi|42740429|gb|AAS44352.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus ATCC 10987]
Length = 346
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|410461457|ref|ZP_11315107.1| sua5/yciO/yrdC/ywlC family protein [Bacillus azotoformans LMG 9581]
gi|409925744|gb|EKN62946.1| sua5/yciO/yrdC/ywlC family protein [Bacillus azotoformans LMG 9581]
Length = 349
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A + G+V+A PT+T+YG +A S +A+++IYE KGR +PL + + +++ +N+
Sbjct: 25 KNAAMWISRGEVVAFPTETVYGLGANALSDQAISKIYEAKGRPSDNPLIVHISNINQLNK 84
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
++P L+DS PGP+T++ +S + + GL+++ +R+PD +
Sbjct: 85 L--VKNIPAVSQKLMDSFWPGPLTIIFE--SNSVVSPKVTAGLQTVAIRMPDHPVALALI 140
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ +A SANL+G+PS + +L R A V DGG G STV+D T
Sbjct: 141 EAADVPVAAPSANLSGKPSPTNADHVLHDLNGRIAGVVDGGATGVG-VESTVIDCTCTPP 199
Query: 204 FKILRPGSAKEETI 217
ILRPG E I
Sbjct: 200 I-ILRPGGVTREEI 212
>gi|448424738|ref|ZP_21582594.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum terrestre JCM 10247]
gi|445681948|gb|ELZ34373.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum terrestre JCM 10247]
Length = 209
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 96/181 (53%), Gaps = 10/181 (5%)
Query: 20 RPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICV 79
RP A A+ G+++ PT+T+YG DA ++AV R++E+KGR ++PL++ V
Sbjct: 9 RPDRSDELRAAAAAVDRGELVVYPTETVYGLGADALDADAVERVFELKGRDRSNPLSLGV 68
Query: 80 GDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
V D R+A + LPGPVTVV+ RG+ + +L G + +G+RVPD +
Sbjct: 69 ASVDDALRYARPTERAVAFARAFLPGPVTVVVERGDP--VPDALTAGRDRVGIRVPDHDL 126
Query: 140 VRVIARGLESA--LALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVV 196
R + L+ L TSAN++G S D ++ + E A V D G P STVV
Sbjct: 127 ARAL---LDETGPLTATSANVSGTGSVTDPADLDDRIREGVAAVIDDGEAPGTE--STVV 181
Query: 197 D 197
D
Sbjct: 182 D 182
>gi|57234410|ref|YP_181562.1| Sua5/YciO/YrdC/YwlC family protein [Dehalococcoides ethenogenes
195]
gi|57224858|gb|AAW39915.1| Sua5/YciO/YrdC/YwlC family protein [Dehalococcoides ethenogenes
195]
Length = 213
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 112/202 (55%), Gaps = 6/202 (2%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
L E+ ++A+ LK G V+ PTDT+Y A +++AV R+++IKGR +T L
Sbjct: 5 LFDAGMESQIDQAVSILKRGGVVVFPTDTVYAVGALASNTQAVRRVFDIKGRANTKGLPA 64
Query: 78 CVGDVSDINRFA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPD 136
+GD+S IN+ A V L L PG +T+VL + ++ LE L G E++ +R+P+
Sbjct: 65 LIGDISQINQVAKVFPPLASKLAKEYWPGGLTLVLPKTDNIPLE--LTGGNETVAIRIPN 122
Query: 137 SNFVRVIARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTV 195
V + + + + TSANL+G SS++ + E L +R + DGG + SG ST+
Sbjct: 123 QPAVIEMLKRVGEPVTGTSANLSGCKSSLNAAEAEKQLGDRVDFILDGGQV-SGGVESTI 181
Query: 196 VDLTRLGKFKILRPGSAKEETI 217
+ + G KI+R G+ KE I
Sbjct: 182 IAVNPDG-LKIIRQGAIKESDI 202
>gi|451940384|ref|YP_007461022.1| translation factor, Sua5/YciO/YrdC family [Bartonella australis
Aust/NH1]
gi|451899771|gb|AGF74234.1| translation factor, Sua5/YciO/YrdC family [Bartonella australis
Aust/NH1]
Length = 320
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 101/200 (50%), Gaps = 4/200 (2%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
V P EAI LK G+++A+PT+T+YG A DA + +AV I+ +K R +PL +
Sbjct: 3 VLPLNSTSIREAIAILKKGRLVALPTETVYGLAGDATNGKAVASIFSLKKRPQFNPLIVH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V V R+ D L L+++ PGP+T+VL + N+ GL ++ VR P
Sbjct: 63 VNGVIMAERYVEIDLLSRRLMEAFWPGPLTLVLPLKVNHNIHPLTTAGLNTLAVRFPSGG 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F VI R + LA SAN +G+ S S + +L + DGGV G ST++
Sbjct: 123 FAEVI-RYFDRPLAAPSANQSGRLSPTSAESVLSSLGSLVPLIIDGGVSSIG-IESTIIK 180
Query: 198 LTRLGKFKILRPGSAKEETI 217
+ + +LRPG E I
Sbjct: 181 VCNESAY-LLRPGGVATEEI 199
>gi|222475032|ref|YP_002563447.1| hypothetical protein AMF_320 [Anaplasma marginale str. Florida]
gi|255003012|ref|ZP_05277976.1| hypothetical protein AmarPR_01750 [Anaplasma marginale str. Puerto
Rico]
gi|269958915|ref|YP_003328704.1| translation factor [Anaplasma centrale str. Israel]
gi|222419168|gb|ACM49191.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
gi|269848746|gb|ACZ49390.1| putative translation factor [Anaplasma centrale str. Israel]
Length = 197
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 5/191 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ ++AL+ +++ PTDTLY AC A S+ +V R+YEIK R++ P+ I + ++ I +
Sbjct: 2 QRVVEALRKEQIVCFPTDTLYALACSALSANSVQRLYEIKRRQYHKPIPILLNSLAAIRK 61
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
FA G+++ L PGPVT V+ ++ +L G ++GVR+PD R I
Sbjct: 62 FASLKDEDWGIIERLSPGPVTFVVPLHDTQSLPGEFFRG--TVGVRIPDHAMARTILEEF 119
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A TSANL+G P + + C G STV D+ K+L
Sbjct: 120 GGPVAATSANLSGMPGARRAMEIPQEIRDCVSELMEDDSAVGGMCSTVFDVQ---SRKVL 176
Query: 208 RPGSAKEETIA 218
R G E IA
Sbjct: 177 RIGMFSEHKIA 187
>gi|345023578|ref|ZP_08787191.1| hypothetical protein OTW25_20089 [Ornithinibacillus scapharcae
TW25]
Length = 344
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 107/195 (54%), Gaps = 14/195 (7%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA Q LK G +A PT+T+YG DA ++EAV +I++ KGR +PL V +
Sbjct: 22 EAAQLLKAGHTVAFPTETVYGLGADATNAEAVAKIFQAKGRPQDNPLIAHVASKDQL--L 79
Query: 89 AVTDHLP---HGLLDSLLPGPVTVVL-SRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ D LP L+D+ PGP+T VL S G + +++ GL ++GVR+P +
Sbjct: 80 KLVDSLPDYVENLIDAFSPGPITYVLPSNGICA---ENVTAGLPTVGVRIPSHPVALALL 136
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLG 202
+ + +A SANL+G+PS + +E+L R A + DGG P+G ST++D T+
Sbjct: 137 KVCDVPIAAPSANLSGKPSPTTADHVWEDLNGRIAGIVDGG--PTGVGVESTIIDCTQET 194
Query: 203 KFKILRPGSAKEETI 217
ILRPG +E I
Sbjct: 195 P-SILRPGGISKEEI 208
>gi|402554583|ref|YP_006595854.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus FRI-35]
gi|401795793|gb|AFQ09652.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus FRI-35]
Length = 346
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAETLMEHFWPGPLTIILPRKEG--ISEKVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|15679686|ref|NP_276803.1| hypothetical protein MTH1692 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|22218836|pdb|1JCU|A Chain A, Solution Structure Of Mth1692 Protein From
Methanobacterium Thermoautotrophicum
gi|2622823|gb|AAB86164.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 208
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 101/192 (52%), Gaps = 6/192 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EEAI ++ G ++ PTDT+YG +A +AV R++ +KGR P++ICV V +I R
Sbjct: 17 EEAISVMEGGGIVIYPTDTIYGLGVNALDEDAVRRLFRVKGRSPHKPVSICVSCVDEIPR 76
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
F+ L++ +LPGP TVVL R E + + G +G+RVPD R IA
Sbjct: 77 FSRPSGDAMELMERILPGPYTVVLERNEL--IPDVITGGSSRVGIRVPDDEICRRIAARF 134
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ TSAN++G+P S +++ + V D G STV+DLT + ++L
Sbjct: 135 --PVTATSANISGKPPSPRLEEIVRDLDAVDLVLDAGDC-LDMEPSTVIDLT-VNPPRVL 190
Query: 208 RPGSAKEETIAI 219
R G + + +
Sbjct: 191 RRGKGPLDPVLL 202
>gi|229033958|ref|ZP_04188912.1| hypothetical protein bcere0028_49880 [Bacillus cereus AH1271]
gi|228728384|gb|EEL79406.1| hypothetical protein bcere0028_49880 [Bacillus cereus AH1271]
Length = 346
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -VIVKEIPPVAEKLMEHFWPGPLTIILPRKE--GISEKVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|384183190|ref|YP_005568952.1| sua5/yciO/yrdC/ywlC family protein [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324329274|gb|ADY24534.1| sua5/yciO/yrdC/ywlC family protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 346
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEQLMEHFWPGPLTIILPRKEG--ISEKVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|148269220|ref|YP_001243680.1| Sua5/YciO/YrdC/YwlC family protein [Thermotoga petrophila RKU-1]
gi|147734764|gb|ABQ46104.1| translation factor SUA5 [Thermotoga petrophila RKU-1]
Length = 335
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 102/191 (53%), Gaps = 4/191 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA++ L+ G+VI PT+T+YG DA + EA +I+E+KGR +PL + + +
Sbjct: 18 KEAVELLRNGEVIIFPTETVYGIGADAYNEEACRKIFELKGRPTDNPLIVHIHSFDQLEE 77
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A L PGP+TV+L R +S + + GL ++ VR+P +
Sbjct: 78 IAEGYEAHLDFLKKFWPGPLTVIL-RKKSEKIPLVVTAGLSTVAVRMPAHPVALKLIELF 136
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ +A SANL+G+PS+ +V+ E+ + + D G P G ST+VDLT+ K +
Sbjct: 137 GNPIAAPSANLSGRPSATNVQHVIEDFMGKVKLIIDAGNTPFG-LESTIVDLTK-EKPVL 194
Query: 207 LRPGSAKEETI 217
LRPG + E +
Sbjct: 195 LRPGPVEVERL 205
>gi|254994878|ref|ZP_05277068.1| hypothetical protein AmarM_01965 [Anaplasma marginale str.
Mississippi]
Length = 197
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 5/191 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ ++AL+ +++ PTDTLY AC A S+ +V R+YEIK R++ P+ I + ++ I +
Sbjct: 2 QRVVEALRKEQIVCFPTDTLYALACSALSANSVQRLYEIKRRQYHKPIPILLNSLAAIRK 61
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
FA G+++ L PGPVT V+ ++ +L G ++GVR+PD R I
Sbjct: 62 FASLKDEDWGIIERLSPGPVTFVVPLHDTQSLPGEFFRG--TVGVRIPDHAMARTILEEF 119
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A TSANL+G P + + C G STV D+ K+L
Sbjct: 120 GGPVAATSANLSGMPGARRAMEIPREIRDCVSELMEDDSAVGGMCSTVFDVQ---SRKVL 176
Query: 208 RPGSAKEETIA 218
R G E IA
Sbjct: 177 RIGMFSEHKIA 187
>gi|402833162|ref|ZP_10881782.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Selenomonas sp. CM52]
gi|402281154|gb|EJU29845.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Selenomonas sp. CM52]
Length = 375
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 6/201 (2%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
V P T A EEA L+ G+V+A PT+T+YG + + A +IYE KGR +PL +
Sbjct: 6 VLPPTAAAIEEAAHLLRAGEVVAFPTETVYGLGANGFDAAACTKIYEAKGRPSDNPLILH 65
Query: 79 VGDVSDINRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
+ + ++ A+ + LL + PGP+T+VL R + + + GL ++GVR+P++
Sbjct: 66 IAHRAMLDEVALDVPEMAEHLLAAFAPGPLTLVLRR--RAAVPDRITGGLATVGVRMPEN 123
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVV 196
+ + R LA SAN +G+PS + + E+L R + DGG G ST+V
Sbjct: 124 DAALALIRATGFPLAAPSANTSGRPSPTTAEAVLEDLAGRIPLILDGGPCRFG-VESTIV 182
Query: 197 DLTRLGKFKILRPGSAKEETI 217
D+T ILRPG+ E +
Sbjct: 183 DVTGEAAV-ILRPGAITREML 202
>gi|425738329|ref|ZP_18856594.1| translation factor [Staphylococcus massiliensis S46]
gi|425480002|gb|EKU47172.1| translation factor [Staphylococcus massiliensis S46]
Length = 346
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 109/203 (53%), Gaps = 19/203 (9%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EE IQ G ++ +PT+T+YG +A EA+ +++ KGR +PL + + D+S ++
Sbjct: 22 EEIIQCFNNGGLVCIPTETVYGLGANAYDDEAITNVFKAKGRPQDNPLIVHIHDLSQLDA 81
Query: 88 FAVTDHLPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
F + H P L+ L PGP++ ++ + L + ++ GL+SI VR+P + R I +
Sbjct: 82 FTTSIH-PEARTLMKHLWPGPISFIVPLKQGV-LSEGVSRGLDSIAVRMPSDDVCRQILK 139
Query: 146 GLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLP-SGRAG--STVVDLTRLG 202
++ +A SAN++G+PS + FE+++ DG + AG STVVD R
Sbjct: 140 AVDLPIAAPSANISGRPSPTT---FEHVYHDMDGRVDGIIRSIQSEAGLESTVVD-CRTF 195
Query: 203 KFKILRPGSAKEETIAILEKHSL 225
FKI RPG ++ KH L
Sbjct: 196 PFKIARPG--------VITKHML 210
>gi|359399016|ref|ZP_09192024.1| translation factor SUA5 [Novosphingobium pentaromativorans US6-1]
gi|357599561|gb|EHJ61271.1| translation factor SUA5 [Novosphingobium pentaromativorans US6-1]
Length = 321
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 102/191 (53%), Gaps = 2/191 (1%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA + L+ G ++AVPT+T+YG A A EAV IY KGR +PL + + D + +
Sbjct: 25 EAARVLREGGLVAVPTETVYGLAARADRDEAVASIYRAKGRPSFNPLIVHIADTASAMQL 84
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
AV D L + PG +T+VL E++ + ++ GL ++ +R P +R +
Sbjct: 85 AVFDERALLLAERFWPGALTLVLPVQENAPIAAAVTAGLPTVALRCPAHPVMRRVIAEAG 144
Query: 149 SALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
LA SAN +G S + + ++L +R A V DGG +G ST++ L G+++IL
Sbjct: 145 LPLAAPSANRSGGVSPTTPMHVVDSLGDRIAAVLDGGACEAGLE-STIIALREGGRWQIL 203
Query: 208 RPGSAKEETIA 218
RPG E IA
Sbjct: 204 RPGPIPESEIA 214
>gi|423608331|ref|ZP_17584223.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD102]
gi|401238340|gb|EJR44781.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD102]
Length = 346
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEQLMEHFWPGPLTIILPRKE--GISEKVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|358636483|dbj|BAL23780.1| putative translation factor [Azoarcus sp. KH32C]
Length = 357
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 111/207 (53%), Gaps = 14/207 (6%)
Query: 20 RPATEAHAEEAIQ----ALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPL 75
RPA+ + E IQ L+ G+++ +PT+T+YG A DA + EAV +I+ KGR PL
Sbjct: 7 RPASATASIEDIQRAADQLRAGELVGMPTETVYGLAADALNVEAVGKIFSAKGRPADHPL 66
Query: 76 AICVGDVSDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGV 132
+ + D S + R+A +P L + PGP T++L R ++ ++ G +++G+
Sbjct: 67 IVHLPDASHLTRWARA--IPKEALALAKAFWPGPFTMILKR--EDDVPDAVTGGQDTVGL 122
Query: 133 RVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRA 191
RVPD + R +S +A SAN G+ S + E L ++ A V +GG G
Sbjct: 123 RVPDHPVALALLRAFDSGIAAPSANRFGRISPTTAAHVREELGDKVALVLEGGACQVG-I 181
Query: 192 GSTVVDLTRLGKFKILRPGSAKEETIA 218
ST++DL+R ILRPG+ + IA
Sbjct: 182 ESTILDLSRDTPV-ILRPGAISADDIA 207
>gi|229158887|ref|ZP_04286944.1| hypothetical protein bcere0010_50590 [Bacillus cereus ATCC 4342]
gi|228624498|gb|EEK81268.1| hypothetical protein bcere0010_50590 [Bacillus cereus ATCC 4342]
Length = 347
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKE--GISERVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|448734981|ref|ZP_21717200.1| Sua5/YciO/YrdC/YwlC family protein [Halococcus salifodinae DSM
8989]
gi|445799035|gb|EMA49417.1| Sua5/YciO/YrdC/YwlC family protein [Halococcus salifodinae DSM
8989]
Length = 194
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 106/200 (53%), Gaps = 18/200 (9%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A A++ G+V+ PT+T+YG A DA S+ AV R++ +KGR + P+++ V DV +
Sbjct: 7 AATAIREGEVVVYPTETVYGLAADALSTAAVERVFAVKGRDRSKPISLAVPDVETAAEYT 66
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS----NFVRVIAR 145
+D LPGPVTV++ E+ + L G + +GVRVPD F+R +A
Sbjct: 67 RPTAQEKRFMDEFLPGPVTVLVEAREA--VPDVLTAGGDQVGVRVPDHPTALAFLREVA- 123
Query: 146 GLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGG-VLPSGRAGSTVVDLTRLGK 203
L TSAN++G PS+ + + + E A V DGG LP STVVD + +
Sbjct: 124 ----PLTATSANVSGNPSARRAEAVDAAVREASAAVIDGGDELPGTE--STVVD---VAE 174
Query: 204 FKILRPGSAKEETIAILEKH 223
I R G+ +E A LE+
Sbjct: 175 RTIHRRGARADEIAAWLERK 194
>gi|228988550|ref|ZP_04148637.1| hypothetical protein bthur0001_52050 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|423633830|ref|ZP_17609483.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD156]
gi|228771167|gb|EEM19646.1| hypothetical protein bthur0001_52050 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|401282430|gb|EJR88330.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD156]
Length = 347
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKE--GISERVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|307941534|ref|ZP_07656889.1| protein SUA5 [Roseibium sp. TrichSKD4]
gi|307775142|gb|EFO34348.1| protein SUA5 [Roseibium sp. TrichSKD4]
Length = 329
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 99/194 (51%), Gaps = 3/194 (1%)
Query: 33 ALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTD 92
ALK G ++ VPT+T+YG A DA + EA RI+E KGR +PL + + V +
Sbjct: 25 ALKAGDLVGVPTETVYGLAADASNPEACARIFEAKGRPQFNPLISHADTLETARQHGVFN 84
Query: 93 HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
L + PGP+T+VL + E+S++ GL+S+ +RVP +R +A LA
Sbjct: 85 AKADRLAAAFWPGPLTLVLPKRETSSISDLATAGLDSVALRVPAGAVMRALAAETGCPLA 144
Query: 153 LTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGS 211
SANL+G+ S+ + D +L A V D G P G + + + + ++LRPG
Sbjct: 145 APSANLSGKISATTADDVIADLGSSVAHVIDAGPCPVGVESTIIACID--DQVRLLRPGG 202
Query: 212 AKEETIAILEKHSL 225
E I + H L
Sbjct: 203 VPAEDIECVLGHPL 216
>gi|229176001|ref|ZP_04303497.1| hypothetical protein bcere0006_50710 [Bacillus cereus MM3]
gi|228607494|gb|EEK64820.1| hypothetical protein bcere0006_50710 [Bacillus cereus MM3]
Length = 347
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 112/203 (55%), Gaps = 11/203 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTSEVP 196
Query: 204 FKILRPGS-AKEETIAILEKHSL 225
ILRPG KE+ A++ SL
Sbjct: 197 -TILRPGGITKEQLEAVIGNVSL 218
>gi|229164273|ref|ZP_04292206.1| hypothetical protein bcere0009_50340 [Bacillus cereus R309803]
gi|228619213|gb|EEK76106.1| hypothetical protein bcere0009_50340 [Bacillus cereus R309803]
Length = 347
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++G+R+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLNTVGIRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTSTVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|219850818|ref|YP_002465250.1| Sua5/YciO/YrdC/YwlC family protein [Methanosphaerula palustris
E1-9c]
gi|219545077|gb|ACL15527.1| Sua5/YciO/YrdC/YwlC family protein [Methanosphaerula palustris
E1-9c]
Length = 193
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA++ L ++ PTDT+YG DA S EAV +YE K R P++I V D +
Sbjct: 5 KEAVKVLHRDGLVVYPTDTIYGLGADALSDEAVAAVYEAKHRPLAKPISIAVSDRDMLAA 64
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
AV + +++ LPGP TVVL L ++L G IG+R+PD + R
Sbjct: 65 LAVVTPVAEQFIEAFLPGPFTVVLK--AKKVLPETLTGGTGMIGLRIPDHPIALELIREF 122
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ + TSANL+G V++ D ++ + D G L STVVDL + +++
Sbjct: 123 DGPITATSANLSGGKDPVTINDVHVRYD---LLIDAGRLTG--LPSTVVDLVDM---RMI 174
Query: 208 RPGSAKEETIAILEK 222
RPG +E A L K
Sbjct: 175 RPGEKFDEAAAFLRK 189
>gi|402302551|ref|ZP_10821662.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Selenomonas sp. FOBRC9]
gi|400380369|gb|EJP33188.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Selenomonas sp. FOBRC9]
Length = 355
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 109/205 (53%), Gaps = 9/205 (4%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++ P +A A Q ++ G ++A PT+T+YG + + A RIY KGR +PL +
Sbjct: 5 IISPVRDADIAHAAQMIRDGALVAFPTETVYGLGANGLDAAACARIYAAKGRPSDNPLIL 64
Query: 78 CVGDVS---DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRV 134
+ D+S D R VT H LL + PGP+TV+L + ++++ + GL ++GVR
Sbjct: 65 HIADLSMAADAAR-TVTPAAAH-LLTAFAPGPITVILPK--AAHVPDIVTGGLSTVGVRC 120
Query: 135 PDSNFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGS 193
PD + R + R +A SAN +G+PS + ++L R C+ DGG G S
Sbjct: 121 PDHDIARALIRAAGVPVAAPSANTSGRPSPTTAAMVADDLAGRIPCILDGGACRWG-VES 179
Query: 194 TVVDLTRLGKFKILRPGSAKEETIA 218
T+VD T G +LRPG+ E IA
Sbjct: 180 TIVDCTEDGIVTVLRPGAVTREMIA 204
>gi|448401495|ref|ZP_21571644.1| Sua5/YciO/YrdC/YwlC family protein [Haloterrigena limicola JCM
13563]
gi|445666410|gb|ELZ19072.1| Sua5/YciO/YrdC/YwlC family protein [Haloterrigena limicola JCM
13563]
Length = 194
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 101/197 (51%), Gaps = 8/197 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A +A+ G ++ PT+T+YG A +AV R++E+KGR + PL+ V V +
Sbjct: 5 DRAAEAIDAGDLVVYPTETVYGLGAAALEPDAVERVFEVKGRDRSKPLSFAVPSVPSALQ 64
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ + + LPGPVTV+ R E+ + + L G + +GVRVPD +
Sbjct: 65 YVRATERERRFMATFLPGPVTVLCRRRET--IPEELTAGRDRVGVRVPDHPLALRLCERA 122
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ + TSAN++GQPS + D + + E A V DGG + STVVD++ I
Sbjct: 123 GTPITATSANVSGQPSVRELGDLDPEIREAAAVVLDGG--KTDGTESTVVDVS---SATI 177
Query: 207 LRPGSAKEETIAILEKH 223
R G+ +E A LE H
Sbjct: 178 HRRGAQADEIEAWLETH 194
>gi|310815072|ref|YP_003963036.1| Sua5/YciO/YrdC family protein [Ketogulonicigenium vulgare Y25]
gi|385232625|ref|YP_005793967.1| translation factor [Ketogulonicigenium vulgare WSH-001]
gi|308753807|gb|ADO41736.1| Sua5/YciO/YrdC family protein [Ketogulonicigenium vulgare Y25]
gi|343461536|gb|AEM39971.1| putative translation factor [Ketogulonicigenium vulgare WSH-001]
Length = 321
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 95/183 (51%), Gaps = 3/183 (1%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+ +AVPT+T+YG A DA +AV IY KGR +PL + V D++D+ FA
Sbjct: 29 GQQVAVPTETVYGLAADATCDDAVAGIYAAKGRPSFNPLIVHVADIADVAAFAALSGESL 88
Query: 97 GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSA 156
L + PGP+T+VL + + K + GLE++ VR+P R + + LA+ SA
Sbjct: 89 ALAQAFWPGPLTLVLPLRADAPISKLVTAGLETVAVRLPAHPVARALIKAAGVPLAMPSA 148
Query: 157 NLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEE 215
N +G+ S + + + L R A V DGG PSG + + + G +LR G +
Sbjct: 149 NPSGRISPTAAQHVLDGLAGRIAAVVDGG--PSGVGVESTIVVAGRGDAIVLRAGGVTPD 206
Query: 216 TIA 218
IA
Sbjct: 207 EIA 209
>gi|341583102|ref|YP_004763594.1| putative translation factor [Thermococcus sp. 4557]
gi|340810760|gb|AEK73917.1| putative translation factor [Thermococcus sp. 4557]
Length = 339
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + + GK++A PT+T+YG DA ++ AV RI+E KGR +PL + + D SD+ R A
Sbjct: 19 AARFILDGKLVAFPTETVYGLGADALNARAVRRIFEAKGRPADNPLIVHIADFSDLGRLA 78
Query: 90 VTDHLPHGLL-DSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
LL + PGP+T+VL R E N+ GL+++ VR+P + R
Sbjct: 79 RDVPREARLLAERFWPGPLTMVLPRDE--NVPDVTTGGLDTVAVRMPAHPIALALIRA-S 135
Query: 149 SALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ +A SAN++G+PS +++ ++ + R C+ DGG G STV+DL+ + +L
Sbjct: 136 TPVAAPSANISGKPSPTLAEHVIDDFYGRIECIIDGGETKIG-VESTVIDLSS-ERPTLL 193
Query: 208 RPGSAKEETI 217
RPG E I
Sbjct: 194 RPGGLPLEEI 203
>gi|448381307|ref|ZP_21561510.1| Sua5/YciO/YrdC/YwlC family protein [Haloterrigena thermotolerans
DSM 11522]
gi|445663115|gb|ELZ15869.1| Sua5/YciO/YrdC/YwlC family protein [Haloterrigena thermotolerans
DSM 11522]
Length = 195
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 5/196 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A +A++ GK++ PT+T+YG A DA S AV R++E+KGR + P+++ V V +
Sbjct: 5 DRAAEAIEEGKLVVYPTETVYGLAADALSPAAVERVFEVKGRDRSKPVSMAVPSVPSALQ 64
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ + LPGPVTV+ R E + L G + +G+RVPD +
Sbjct: 65 HVRATERERQFMGTFLPGPVTVLCRRRE--RVPDELTAGQDRVGIRVPDHAVALRLCERA 122
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ + TSAN++G+ S+ + D + A V G G STVVD++ I
Sbjct: 123 GTPITSTSANVSGRESARRIDDLDPEIREAATVVLGSGETDGGTESTVVDVS---SGTIH 179
Query: 208 RPGSAKEETIAILEKH 223
R G+ +E A LE+H
Sbjct: 180 RRGAMADEIEAWLERH 195
>gi|423461891|ref|ZP_17438687.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG5X2-1]
gi|401134068|gb|EJQ41687.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG5X2-1]
Length = 347
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L E+ A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNEKIAGIVDGGATGVG-VESTVIDCTSEVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|384920290|ref|ZP_10020303.1| Sua5/YciO/YrdC family protein [Citreicella sp. 357]
gi|384465828|gb|EIE50360.1| Sua5/YciO/YrdC family protein [Citreicella sp. 357]
Length = 315
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A L+ G ++A PT+T+YG DA + AV RIYE KGR +PL + D++ + +
Sbjct: 16 RAATVLQGGGLVAFPTETVYGLGGDASNDRAVARIYEAKGRPSFNPLIVHFADLATVQAY 75
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
+ + D+L PGP+T+VL E + L K + GL+++ VRVP + R + R
Sbjct: 76 VHWSDMAQRVADALWPGPLTLVLPLREGARLSKLVTAGLDTLAVRVPANPVARALLRAAG 135
Query: 149 SALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A SAN +G+ S E L R V DGG G ST++ L GK +L
Sbjct: 136 VPVAAPSANRSGRISPTRAAHVLETLDGRIDAVLDGGACDVGLE-STILGLA--GKPTLL 192
Query: 208 RPGSAKEETIAIL 220
RPG E + L
Sbjct: 193 RPGRVTCEQLTDL 205
>gi|357058787|ref|ZP_09119633.1| hypothetical protein HMPREF9334_01350 [Selenomonas infelix ATCC
43532]
gi|355373133|gb|EHG20454.1| hypothetical protein HMPREF9334_01350 [Selenomonas infelix ATCC
43532]
Length = 350
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 114/219 (52%), Gaps = 11/219 (5%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
L RP + E A + +++G ++A PT+T+YG + + A RIY KGR +PL +
Sbjct: 5 LFRPTSPTDFERAAETIRSGALVAFPTETVYGLGANGLDAAACARIYAAKGRPSDNPLIL 64
Query: 78 CVGDVSDINRFAVTDHLPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVP 135
+ D++ + A +D P LL PGP+TV+L + ++ + + GL ++GVR P
Sbjct: 65 HIADLAMAHEVA-SDVPPTAAHLLTVFAPGPLTVILPK--AARIPDIVTGGLPTVGVRCP 121
Query: 136 DSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAG-- 192
D + R + R +A SAN +G+PS S +E++ R + DGG S R G
Sbjct: 122 DHDVARRLIRAAGVPIAAPSANTSGRPSPTSAAMVYEDMAGRIPLILDGG---SCRLGVE 178
Query: 193 STVVDLTRLGKFKILRPGSAKEETIAILEKHSLVEEPAA 231
ST+VD T G ILRPG+ E IA H V AA
Sbjct: 179 STIVDCTEEGTVTILRPGAVTREMIAAELPHIEVRMDAA 217
>gi|300855871|ref|YP_003780855.1| translation factor [Clostridium ljungdahlii DSM 13528]
gi|300435986|gb|ADK15753.1| putative translation factor [Clostridium ljungdahlii DSM 13528]
Length = 349
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 104/182 (57%), Gaps = 6/182 (3%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 91
+ LK G+V+A+PT+T+YG A DA + AV +I+++KGR +PL + + + +
Sbjct: 28 EYLKKGEVVAIPTETVYGLAADAFNENAVKKIFKVKGRPQDNPLLVHIYKLEQVYDICKD 87
Query: 92 DHL-PHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA 150
H + D+ PG VT++ ++ + + +++ G++++GVR P S R I + +
Sbjct: 88 IHKDAEKVFDAFWPGSVTLIFNKKDC--ISDTVSAGMKTVGVRFPKSEVARAIIKESGTL 145
Query: 151 LALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRP 209
L SANL+G+PS+ S + + +L + C+ DGG G ST++D++ +LRP
Sbjct: 146 LVAPSANLSGKPSTTSAEHCYNDLNGKIPCILDGGPCSIGLE-STIIDMSTPDPV-LLRP 203
Query: 210 GS 211
G+
Sbjct: 204 GA 205
>gi|409436313|ref|ZP_11263497.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
gi|408751870|emb|CCM74647.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
Length = 324
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 8/188 (4%)
Query: 28 EEAIQA----LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
++A++A L G IA+PT+T+YG A DA + A+ IYE KGR +PL + D+
Sbjct: 12 QQAVEAGCTVLGEGFPIAIPTETVYGLAADATNPIAITHIYETKGRPRFNPLICHMADLP 71
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ A D + L ++ PGP+T+VL + S + GL+++G+RVP F +
Sbjct: 72 MAEKHAEFDPISRALAEAFWPGPLTLVLPLKQGSTIHSLATAGLDTVGIRVP-QGFAGEL 130
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
R LA SAN +G+ S+ S + +L ER + D G G ST+V + G
Sbjct: 131 IRAFGRPLAAPSANTSGKISATSADHVDADLGERIRLILDAGASTVG-VESTIVKVED-G 188
Query: 203 KFKILRPG 210
K K+LRPG
Sbjct: 189 KLKLLRPG 196
>gi|374311624|ref|YP_005058054.1| Sua5/YciO/YrdC/YwlC family protein [Granulicella mallensis
MP5ACTX8]
gi|358753634|gb|AEU37024.1| Sua5/YciO/YrdC/YwlC family protein [Granulicella mallensis
MP5ACTX8]
Length = 214
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 107/201 (53%), Gaps = 12/201 (5%)
Query: 25 AHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSD 84
AH + +Q L +G+V+A+PTDT YG A D + AV+RIY++K R PL++ + DV+
Sbjct: 16 AHIDRVVQHLNSGEVVALPTDTFYGLAVDPVNLRAVDRIYDLKSRARHKPLSLLIADVAQ 75
Query: 85 INRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
A D L + PGP+T+++ G L + N G ++ +RVP++ R +
Sbjct: 76 AYELARGIDTAFDRLAERFWPGPLTIIVKAGSKLPLRVTANTG--NVALRVPEAPICRAV 133
Query: 144 ARGLESALALTSANLTGQPS---SVSVKDFENLWERCACVYDGGVLPSGRA-GSTVVDLT 199
L + TSANL G P + V+D ++ + DGG P+ R+ +T+VDL+
Sbjct: 134 VAKLGLPITATSANLRGLPECSYAGCVRD--QFGDKIPLIVDGG--PTSRSMATTIVDLS 189
Query: 200 RLGK-FKILRPGSAKEETIAI 219
G + ILR G+ IA+
Sbjct: 190 GGGNSWMILREGAIPTHEIAL 210
>gi|73748639|ref|YP_307878.1| translation factor Sua5 [Dehalococcoides sp. CBDB1]
gi|289432664|ref|YP_003462537.1| Sua5/YciO/YrdC/YwlC family protein [Dehalococcoides sp. GT]
gi|452203624|ref|YP_007483757.1| YrdC/Sua5 family protein [Dehalococcoides mccartyi DCMB5]
gi|73660355|emb|CAI82962.1| putative translation factor Sua5 [Dehalococcoides sp. CBDB1]
gi|288946384|gb|ADC74081.1| Sua5/YciO/YrdC/YwlC family protein [Dehalococcoides sp. GT]
gi|452110683|gb|AGG06415.1| YrdC/Sua5 family protein [Dehalococcoides mccartyi DCMB5]
Length = 213
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 6/196 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E A+Q LK G V+ PTDT+Y A ++ AVNR+++IKGR +T L +GD+S
Sbjct: 11 EIQINRAVQVLKNGGVVIFPTDTVYAVGALASNTHAVNRVFDIKGRTNTKGLPALIGDIS 70
Query: 84 DINRFA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
I++ A + L L PG +T+VL + ++ LE L G E++ +R+P+ V
Sbjct: 71 QIHQVAKIFPPLARKLAAEYWPGGLTLVLPKTDNIPLE--LTGGNETVAIRIPNQAAVIE 128
Query: 143 IARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ + + + TSANL+G SS++ + + L +R + DGG + SG ST+V +
Sbjct: 129 MLKRVAEPVTGTSANLSGCKSSLNASEAKIQLGDRVDFILDGGQV-SGGVESTIVTVNN- 186
Query: 202 GKFKILRPGSAKEETI 217
+ KI+R G+ KE I
Sbjct: 187 DELKIIRQGAIKESDI 202
>gi|403667962|ref|ZP_10933259.1| hypothetical protein KJC8E_04267 [Kurthia sp. JC8E]
Length = 340
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 7/196 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA+ LK G+V+A PT+T+YG A +AV++IY KGR +PL + +G ++R
Sbjct: 17 DEAVALLKAGEVVAFPTETVYGLGGIATDDDAVSKIYGAKGRPSDNPLIVHIGSFEQLDR 76
Query: 88 FAVTD--HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
+ V D + + PGP+TV+ + + L + GL+++G+R+P+ + R
Sbjct: 77 Y-VEDLSEKAKACMKAFWPGPLTVI-CKVKPGTLSTKVTAGLDTVGIRMPNHPVALRLLR 134
Query: 146 GLESALALTSANLTGQPSSVS-VKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
L+ +A SAN +G+PS + E+L R + DGG G STV+DLT L
Sbjct: 135 QLDEPVAAPSANTSGKPSPTEGIHVEEDLKSRIPLILDGGATGIG-VESTVIDLT-LETP 192
Query: 205 KILRPGSAKEETIAIL 220
ILRPG +E L
Sbjct: 193 TILRPGGITKEMFEQL 208
>gi|403383671|ref|ZP_10925728.1| hypothetical protein KJC30_03190 [Kurthia sp. JC30]
Length = 341
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 102/190 (53%), Gaps = 5/190 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA+ LK G+V+A PT+T+YG A + EAV IY KGR +PL + +G ++R
Sbjct: 18 DEAVALLKAGQVVAFPTETVYGLGGVATNDEAVAGIYAAKGRPSDNPLIVHIGAFEQLDR 77
Query: 88 FAVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ + + + PGP+TV+ + + L + GL+++G+R+P+ + R
Sbjct: 78 YVMDLSDKAKACMKAFWPGPLTVI-CKVKPGTLSNKVTAGLDTVGIRMPNHPVALRLLRQ 136
Query: 147 LESALALTSANLTGQPSSVS-VKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
L+ +A SAN +G+PS V E+L R + DGG G STV+DLT L
Sbjct: 137 LDEPVAAPSANTSGKPSPTEGVHVEEDLTGRIPLILDGGATGIG-VESTVIDLT-LDTPT 194
Query: 206 ILRPGSAKEE 215
ILRPG +E
Sbjct: 195 ILRPGGITKE 204
>gi|312142774|ref|YP_003994220.1| Sua5/YciO/YrdC/YwlC family protein [Halanaerobium hydrogeniformans]
gi|311903425|gb|ADQ13866.1| Sua5/YciO/YrdC/YwlC family protein [Halanaerobium hydrogeniformans]
Length = 350
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A + L G+++A+PT+T+YG A DA + EAV RI+E KGR +PL I +G D+ +
Sbjct: 18 EKAAELLHKGELVAIPTETVYGLAADALNPEAVKRIFEAKGRPQDNPLIIHIGAQKDLEK 77
Query: 88 FAV--TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
L+D PGP+T++ + SS + + GL+++ VR+P + +
Sbjct: 78 LIAEKVSKRAQKLIDKYWPGPLTLIFKK--SSLVPAETSAGLDTVAVRMPSHPVTIKLLQ 135
Query: 146 GLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
LA SAN +G PS + + +L + + DGG G STV+DL++ +
Sbjct: 136 KSGLVLAAPSANTSGYPSPTRAEHVYADLKTKIPLILDGGSCEVG-VESTVIDLSQ-KEA 193
Query: 205 KILRPGSAKEETIA 218
+LRPG E +A
Sbjct: 194 VVLRPGGISREELA 207
>gi|448330374|ref|ZP_21519656.1| Sua5/YciO/YrdC/YwlC family protein [Natrinema versiforme JCM 10478]
gi|445611755|gb|ELY65501.1| Sua5/YciO/YrdC/YwlC family protein [Natrinema versiforme JCM 10478]
Length = 195
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 7/197 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A +A++ G+++ PT+T+YG A DA AV R++E KGR + P+++ V V +
Sbjct: 5 DRAAEAIEAGELVVYPTETVYGLAADALEGVAVERVFETKGRDRSKPISMAVPSVPSALQ 64
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ + LPGPVTV+ R E+ + L G + +G+RVPD+ +
Sbjct: 65 HVRATERERQFMGTFLPGPVTVLCRRREA--VPDELTAGRDRVGIRVPDNEIALRLCERT 122
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ + TSAN++G+ S+ D + + E A V DGG G STVVD++ I
Sbjct: 123 GTPITATSANVSGRESARRPADLDPEIREAAAVVLDGGETDGG-TESTVVDVS---SGTI 178
Query: 207 LRPGSAKEETIAILEKH 223
R G+ +E A LE+H
Sbjct: 179 HRRGAKADEIEAWLERH 195
>gi|433460008|ref|ZP_20417644.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Halobacillus
sp. BAB-2008]
gi|432192124|gb|ELK49037.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Halobacillus
sp. BAB-2008]
Length = 344
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 114/204 (55%), Gaps = 13/204 (6%)
Query: 20 RPA-TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+PA T+ EEA + L++G+V+A PT+T+YG DA AV RI++ KGR +PL +
Sbjct: 11 QPAVTDEAIEEAARLLQSGEVVAFPTETVYGLGADATKEAAVQRIFDAKGRPSDNPLIVH 70
Query: 79 VGDVSDINRFAVTDHLP---HGLLDSLLPGPVTVVL-SRGESSNLEKSLNPGLESIGVRV 134
V D + + + +P L+D+ PGP+T+++ S G +++ ++ GL SIG+R+
Sbjct: 71 VADRAQVK--GLVSEIPPVAERLMDAFWPGPLTLIMKSNGTAAD---NVTAGLSSIGIRM 125
Query: 135 PDSNFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGS 193
PD + + LA SAN +G+PS +++ ++L R A + DGG G S
Sbjct: 126 PDHPVAASLIKASRLPLAAPSANRSGRPSPTLAGHVRQDLDGRIAGIIDGGATGVG-VES 184
Query: 194 TVVDLTRLGKFKILRPGSAKEETI 217
TVVD T ILRPG +E +
Sbjct: 185 TVVDCTTEVPI-ILRPGGITKEDL 207
>gi|375087340|ref|ZP_09733719.1| Sua5/YciO/YrdC/YwlC family protein [Megamonas funiformis YIT 11815]
gi|374561315|gb|EHR32657.1| Sua5/YciO/YrdC/YwlC family protein [Megamonas funiformis YIT 11815]
Length = 345
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 107/189 (56%), Gaps = 8/189 (4%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 91
Q +K G ++A PT+T+YG D + A IY KGR +PL + + D + R V+
Sbjct: 21 QCIKDGGLVAFPTETVYGLGGDGLNEVAAKNIYLAKGRPSDNPLILHINDQKMLGRI-VS 79
Query: 92 DHLPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ P ++ + PGP+T++L + S+ + K++ GL++I VR+PD++ R + + ++
Sbjct: 80 EVTPMAKKIMTAFCPGPITIILPK--SNIVPKAVTGGLDTIAVRMPDNDIARALIKYADT 137
Query: 150 ALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
+A SAN++G+PS + + +++L R V DGG G ST+VD T ILR
Sbjct: 138 PIAAPSANISGRPSPTTAQAVYKDLQSRIDMVLDGGACQFG-VESTIVDCTEDVPI-ILR 195
Query: 209 PGSAKEETI 217
PG+ +E +
Sbjct: 196 PGAITKEML 204
>gi|310644396|ref|YP_003949155.1| translation factor (sua5) [Paenibacillus polymyxa SC2]
gi|309249347|gb|ADO58914.1| Putative translation factor (SUA5) [Paenibacillus polymyxa SC2]
gi|392305078|emb|CCI71441.1| putative protein YwlC [Paenibacillus polymyxa M1]
Length = 427
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 118/222 (53%), Gaps = 9/222 (4%)
Query: 13 ENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHT 72
E AG E EA L+ G+ +A PT+T+YG DA S++AV ++ KGR
Sbjct: 75 ELSAGQALITAEKGIREAAVLLQAGETVAFPTETVYGLGADARSTKAVEAVFAAKGRPSD 134
Query: 73 SPLAICVGDVSDIN-RFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIG 131
+PL + + D + + A + L+++ PGP+T+VL S L + GL+++G
Sbjct: 135 NPLIVHISDAAQLKGMVAEINDTARALMNTFWPGPLTLVLPV-VSQALSSRVTAGLDTVG 193
Query: 132 VRVPDSNF-VRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSG 189
VR+PD +R+IA LA SAN +G+PS +++ E+L R + DGG P+G
Sbjct: 194 VRMPDHPIALRLIAEA-GCPLAAPSANRSGRPSPTLAQHVLEDLKGRIGGILDGG--PTG 250
Query: 190 RA-GSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVEEPA 230
STVV + G ILRPG E +A + + S+V +PA
Sbjct: 251 VGLESTVVQVGDEGTVTILRPGGVTAEQLATVAR-SVVLDPA 291
>gi|121602316|ref|YP_988708.1| Sua5/YciO/YrdC family protein [Bartonella bacilliformis KC583]
gi|421760517|ref|ZP_16197333.1| Sua5/YciO/YrdC family protein [Bartonella bacilliformis INS]
gi|120614493|gb|ABM45094.1| Sua5/YciO/YrdC family protein [Bartonella bacilliformis KC583]
gi|411174934|gb|EKS44961.1| Sua5/YciO/YrdC family protein [Bartonella bacilliformis INS]
Length = 320
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 4/208 (1%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P +EA++ LK G+++ +PT+T+YG A DA + +AV I+ IKGR +PL
Sbjct: 3 ILPLNSHSIKEAVEILKKGQLVVLPTETVYGLAGDATNGKAVASIFAIKGRPQFNPLIAH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + + D L L+++ PGP+T+VL N+ GL ++ VR PD
Sbjct: 63 VSSIKMAECYVEIDCLSRRLMEAFWPGPLTLVLPLKPHHNIHPLTTAGLNTLAVRFPDGG 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F ++ + LA SAN +G S S F++L E+ + + D G G ST+V
Sbjct: 123 FAEIV-QCFGRPLAAPSANQSGYLSPTSAASVFDSLGEKVSLIIDNGPAKIGLE-STIVK 180
Query: 198 LTRLGKFKILRPGSAKEETIAILEKHSL 225
+ G +LRPG E I + + SL
Sbjct: 181 VCD-GNIYLLRPGGIIAEDIEKVVEKSL 207
>gi|389852068|ref|YP_006354302.1| sua5 superfamily-like protein [Pyrococcus sp. ST04]
gi|388249374|gb|AFK22227.1| sua5 superfamily-like protein [Pyrococcus sp. ST04]
Length = 340
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 100/190 (52%), Gaps = 14/190 (7%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
++ GK++A PT+T+YG DA + AV RI+E KGR +PL + + D S + + +
Sbjct: 23 IREGKLVAFPTETVYGLGADALNERAVRRIFEAKGRPPDNPLIVHIADFSQV--YELAKE 80
Query: 94 LPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA 150
+P L PGP+T+VL R E + K GLE++ +R+P + +
Sbjct: 81 VPEEAEMLAKKFWPGPLTIVLPRKEL--VPKVTTGGLETVAIRMPAHEIALHLIKLSGRP 138
Query: 151 LALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAG--STVVDLTRLGKFKIL 207
+A SAN++G+PS + + ++ + R C+ DGG R G STV+DLT +L
Sbjct: 139 IAAPSANISGKPSPTTAEHVIDDFYGRIECIIDGG---ETRVGVESTVIDLTEWPPV-LL 194
Query: 208 RPGSAKEETI 217
RPG E I
Sbjct: 195 RPGGLPVEEI 204
>gi|261210756|ref|ZP_05925048.1| YrdC family protein [Vibrio sp. RC341]
gi|260840241|gb|EEX66821.1| YrdC family protein [Vibrio sp. RC341]
Length = 320
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 104/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 10 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 69
Query: 83 SDINRFA--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A + D + L + PGP+T++L + E ++ + GL++IG+RVP +
Sbjct: 70 EQLSEWATDIADEA-YQLAQAFWPGPLTMLLPKAE--HVSPVVTGGLDTIGIRVPAHPVL 126
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 127 LEILKAHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 185
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 186 -CKPFRVLRAG 195
>gi|397779560|ref|YP_006544033.1| hypothetical protein BN140_0394 [Methanoculleus bourgensis MS2]
gi|396938062|emb|CCJ35317.1| putative protein ywlC [Methanoculleus bourgensis MS2]
Length = 191
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 101/194 (52%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A++ L+ +I PT+T+YG DA S +AV ++YE K R + P++I V D+ +
Sbjct: 5 DMAVRVLRRDGLIVYPTETVYGLGADALSEDAVLKVYEAKNRPLSRPISIAVSDMDMLGA 64
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
AV D ++ LPGPVTVVL S L L G +G+R PD I L
Sbjct: 65 VAVLDEAARAFIERFLPGPVTVVLP--AKSCLPAILTGGTGLVGIRWPDHEVALAIIARL 122
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+S + TSAN++G+ + E+++ V DGG LP STVVDLT +IL
Sbjct: 123 DSPITATSANVSGE---IPPTRPEDVYVPNDYVVDGGELPG--TPSTVVDLT---TRRIL 174
Query: 208 RPGSAKEETIAILE 221
R G+ E A L+
Sbjct: 175 RKGAEWEAVEAFLK 188
>gi|254459968|ref|ZP_05073384.1| Sua5/YciO/YrdC family protein [Rhodobacterales bacterium HTCC2083]
gi|206676557|gb|EDZ41044.1| Sua5/YciO/YrdC family protein [Rhodobacteraceae bacterium HTCC2083]
Length = 310
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 93/185 (50%), Gaps = 4/185 (2%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
L GK++A PT+T+YG DA EAV +IY KGR +PL + V D F V
Sbjct: 19 LSDGKLVAFPTETVYGLGADARDGEAVAKIYAAKGRPSFNPLIVHVADADAARTFGVWSD 78
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L D+ PGPV++VL + + L + GLES+ +RVP + + + +A
Sbjct: 79 TAQRLADAFWPGPVSLVLPLRKHAGLSDLVTAGLESVALRVPAGHLAQDLLNAFGGPIAA 138
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSA 212
SAN +G+ S + + F L + A V DGG G ST+V LT +LR G A
Sbjct: 139 PSANPSGRISPTTPEHVFAGLDGKIAAVLDGGACAVG-VESTIVGLTD--HPTLLRAGGA 195
Query: 213 KEETI 217
ETI
Sbjct: 196 SRETI 200
>gi|414171806|ref|ZP_11426717.1| Sua5/YciO/YrdC/YwlC family protein [Afipia broomeae ATCC 49717]
gi|410893481|gb|EKS41271.1| Sua5/YciO/YrdC/YwlC family protein [Afipia broomeae ATCC 49717]
Length = 328
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 103/203 (50%), Gaps = 11/203 (5%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ PA+ A A+ A + L+ G ++A PT+T+YG DA ++ AV R+YE KGR +PL
Sbjct: 9 ILPASGA-ADTAARCLEGGGLVAFPTETVYGLGADATNARAVARLYEAKGRPSFNPLIAH 67
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
VGD+ R A D L ++ PGP+T+VL + + GLE++ VRVP
Sbjct: 68 VGDLQAARRIARFDDRSLRLAETFWPGPLTLVLPKAPGCPVSDLATAGLETVAVRVPAHP 127
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
I R + SAN++G S + + F +L R + DGG + G V+
Sbjct: 128 VAHEILRAFGKPIVAPSANISGHVSPTTAEHVFGDLSGRIDLIVDGGPVSVG------VE 181
Query: 198 LTRLGKFK---ILRPGSAKEETI 217
T +G F+ +LRPG E I
Sbjct: 182 STIVGCFETPLLLRPGGLPREDI 204
>gi|70725920|ref|YP_252834.1| hypothetical protein SH0919 [Staphylococcus haemolyticus JCSC1435]
gi|68446644|dbj|BAE04228.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 347
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
P E Q G +IA+PT+T+YG DA + AV+ IY+ KGR +PL + +
Sbjct: 15 PLDYPELENIKQVYNDGGLIAIPTETVYGLGADARNQYAVSNIYQAKGRPSDNPLIVHIH 74
Query: 81 DVSDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
D S +++ + HLP L+D PGP++ +L + EK + GL+SI VR+P
Sbjct: 75 DKSQLDQ--IVSHLPEEAKCLMDEFWPGPISFILPLRQGYLCEK-VTGGLQSIAVRMPSH 131
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVV 196
R I + ++ +A SAN++G+PS + + F +L + + +G G STV+
Sbjct: 132 PIGRAILQYIDIPIAAPSANVSGRPSPTTFQHVFNDLNGKIDGIVNGDQSEEGLE-STVL 190
Query: 197 DLTRLGKFKILRPGS 211
D T+ F+I RPGS
Sbjct: 191 DCTQF-PFRIARPGS 204
>gi|85709789|ref|ZP_01040854.1| putative translation factor [Erythrobacter sp. NAP1]
gi|85688499|gb|EAQ28503.1| putative translation factor [Erythrobacter sp. NAP1]
Length = 315
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 3/196 (1%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
L +G+++AVPT+T+YG A A S++AV +IY KGR +PL + V D+ A D
Sbjct: 24 LTSGELVAVPTETVYGLAARADSADAVAKIYAAKGRPDFNPLIVHVRDIEQAQGLAEFDD 83
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L++ PGP+T+VL + + K++ GL +IG+R P ++ + + + LA
Sbjct: 84 RAIDLVERFWPGPLTLVLPIRSDAAIAKAVTAGLPTIGLRQPSHKVMQAVLKSVGVPLAA 143
Query: 154 TSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSA 212
SAN + S + +L + + DGG SG ST+V L + G + +LRPG
Sbjct: 144 PSANRSEHISPTRAEHVTASLGDNAPLILDGGPSQSGLE-STIVALRQSGDWNLLRPGPV 202
Query: 213 KEETIA-ILEKHSLVE 227
+ET+ IL S +E
Sbjct: 203 TKETLERILGPESEIE 218
>gi|410455325|ref|ZP_11309208.1| integral membrane protein [Bacillus bataviensis LMG 21833]
gi|409929523|gb|EKN66601.1| integral membrane protein [Bacillus bataviensis LMG 21833]
Length = 347
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 103/191 (53%), Gaps = 5/191 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A L+ +V+A+PT+T+YG +A S EAV +IYE KGR +PL I + + + RF
Sbjct: 23 DAADLLRRNEVVALPTETVYGLGGNAESDEAVAKIYEAKGRPGDNPLIIHIAEREQLTRF 82
Query: 89 -AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A + L+D+ PGP+T++ E EK+ GLE++ VR+PD + +
Sbjct: 83 VAEVPVMAETLMDAFWPGPLTIIFKMKEGVLSEKA-TAGLETVAVRMPDHPVALSLLKTC 141
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+A SAN +G+PS + + E+L + A V DGG G STVVD T I
Sbjct: 142 GLPIAAPSANSSGKPSPTTAEHVLEDLNGKIAGVVDGGATGVG-VESTVVDCTAAIPV-I 199
Query: 207 LRPGSAKEETI 217
LRPG +E +
Sbjct: 200 LRPGGVTKEQL 210
>gi|291532654|emb|CBL05767.1| translation factor SUA5 [Megamonas hypermegale ART12/1]
Length = 271
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 107/189 (56%), Gaps = 8/189 (4%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 91
Q +K G ++A PT+T+YG D + A IY KGR +PL + + D + R V+
Sbjct: 21 QCIKDGGLVAFPTETVYGLGGDGLNEVASKNIYLAKGRPSDNPLILHINDQKMLGRI-VS 79
Query: 92 DHLPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ P ++ + PGP+T++L + S+ + K++ GL++I VR+PD++ R + + ++
Sbjct: 80 EVTPMAKKIMTAFCPGPITIILPK--SNIVPKAVTGGLDTIAVRMPDNDIARALIKYADT 137
Query: 150 ALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
+A SAN++G+PS + + +++L R V DGG G ST+VD T ILR
Sbjct: 138 PIAAPSANISGRPSPTTAQAVYKDLQSRIDMVLDGGACQFG-VESTIVDCTEDVPI-ILR 195
Query: 209 PGSAKEETI 217
PG+ +E +
Sbjct: 196 PGAITKEML 204
>gi|448456871|ref|ZP_21595527.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum lipolyticum DSM
21995]
gi|445811468|gb|EMA61475.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum lipolyticum DSM
21995]
Length = 201
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 6/169 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A++A+ G ++ PT+T+YG DA AV R++E+KGR+ ++PL++ V V R+
Sbjct: 11 AVEAIAEGDLVVYPTETVYGLGADALDPAAVERVFELKGRERSNPLSLGVPSVDAALRYT 70
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ LPGPVTV++ RG++ + +L G + +G+RVPD R + R
Sbjct: 71 RPTEFAVAFARAFLPGPVTVIVERGDA--VPDALTAGRDRVGIRVPDHPIARDLLRET-G 127
Query: 150 ALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVD 197
L TSAN++G+ S D ++ + E A V DGG P STVVD
Sbjct: 128 PLTATSANVSGRGSVTHPDDLDDRIREGVAAVVDGGETPGTE--STVVD 174
>gi|255004138|ref|ZP_05278939.1| hypothetical protein AmarV_01920 [Anaplasma marginale str.
Virginia]
Length = 214
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 95/191 (49%), Gaps = 5/191 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ ++AL+ +++ PTDTLY AC A S+ +V R+YEIK R++ P+ I + ++ I +
Sbjct: 2 QRVVEALRKEQIVCFPTDTLYALACSALSANSVQRLYEIKRRQYHKPIPILLNSLAAIRK 61
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
FA G+++ L PGPVT V+ ++ +L G ++GVR+P+ R I
Sbjct: 62 FASLKDEDWGIIERLSPGPVTFVVPLHDTQSLPGEFFRG--TVGVRIPNHAMARTILEEF 119
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A TSANL+G P + + C G STV D+ K+L
Sbjct: 120 GGPVAATSANLSGMPGARRAMEIPQEIRDCVSELMEDDSAVGGMCSTVFDVQ---SRKVL 176
Query: 208 RPGSAKEETIA 218
R G E IA
Sbjct: 177 RIGMFSEHKIA 187
>gi|424672250|ref|ZP_18109231.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis 599]
gi|402357295|gb|EJU92009.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis 599]
Length = 340
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNVS-SDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S K + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAKHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|338707272|ref|YP_004661473.1| Sua5/YciO/YrdC/YwlC family protein [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336294076|gb|AEI37183.1| Sua5/YciO/YrdC/YwlC family protein [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 324
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 9/213 (4%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
+VRP EA +EA+ +++G +AVPT+T+YG A DA S+EAV RIY+ KGR +PL +
Sbjct: 11 VVRPCDEAGIKEAVSLIRSGLPVAVPTETVYGLAADAASNEAVARIYQAKGRPSFNPLIV 70
Query: 78 CVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
V D+ A + PGP+T+VL + + + + GL+ + +R+P
Sbjct: 71 HVADIEQALSIAAFSEETLKIAQLFWPGPLTMVLPLKKEAPIASIVTAGLKRVAIRMPSH 130
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTV- 195
+R + LA SAN +G S S + +N L R + DGG+ G + +
Sbjct: 131 PVMRALILSSRCLLAAPSANKSGAISPTSAQHVKNSLDGRIPLILDGGLTEDGLESTIIA 190
Query: 196 -----VDLTRLGKFKILRPGSAKEETIAILEKH 223
+ L R G I K + I+E H
Sbjct: 191 PENDKIHLLRYGPITI--EALKKATALPIVETH 221
>gi|270308141|ref|YP_003330199.1| translation factor SUA5 [Dehalococcoides sp. VS]
gi|270154033|gb|ACZ61871.1| translation factor SUA5 [Dehalococcoides sp. VS]
Length = 213
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 6/196 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E A++ LK G V+ PTDT+Y A ++ AVNR+++IKGR +T L +GDVS
Sbjct: 11 ENQITNAVRILKEGGVVIFPTDTVYAVGALARNTHAVNRVFDIKGRANTKGLPALIGDVS 70
Query: 84 DINRFA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
IN+ A V L L PG +T+VL + ++N+ L G E++ +R+P+ V
Sbjct: 71 QINQVAKVFPELARKLAAEYWPGGLTLVLPK--TNNIPLELTGGNETVAIRIPNQPAVIE 128
Query: 143 IARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ + + + TSANL+G SS++ + L +R + DGG + SG ST+V +
Sbjct: 129 MLKRIGEPITGTSANLSGCKSSLNAAEARSQLGDRVDFILDGGQV-SGGVESTIVAVNN- 186
Query: 202 GKFKILRPGSAKEETI 217
+ KI+R G+ KE I
Sbjct: 187 NELKIIRQGAIKEADI 202
>gi|430002414|emb|CCF18195.1| conserved hypothetical protein containing Sua5/YciO/YrdC/YwlC
domains [Rhizobium sp.]
Length = 325
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 106/205 (51%), Gaps = 6/205 (2%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G +A+PT+T+YG A DA + A+ RIYE KGR +PL + D + + A
Sbjct: 19 AVDTLREGLPVALPTETVYGLAADATNPLALTRIYETKGRPRFNPLICHMADFAMAEQHA 78
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
D + L + PGP+T++L E + + GL ++GVRVP F + R L
Sbjct: 79 HFDPVSQRLAEHFWPGPLTLILPLKEGTPIHPLATAGLATVGVRVP-VGFAGSVIRRLGR 137
Query: 150 ALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
LA SAN +G+ S S + E+L E+ A + DG P G ST++ + ++LR
Sbjct: 138 PLAAPSANTSGKVSPTSAQHVAEDLGEKLALIIDGDAAPVG-VESTILRVEG-NMVRLLR 195
Query: 209 PGSAKEETIAILEKHSLV--EEPAA 231
PG + I + ++ E PAA
Sbjct: 196 PGGVSADQIEAVAGLPIIRQEAPAA 220
>gi|56416667|ref|YP_153741.1| hypothetical protein AM436 [Anaplasma marginale str. St. Maries]
gi|56387899|gb|AAV86486.1| hypothetical protein AM436 [Anaplasma marginale str. St. Maries]
Length = 197
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 95/191 (49%), Gaps = 5/191 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ ++AL+ +++ PTDTLY AC A S+ +V R+YEIK R++ P+ I + ++ I +
Sbjct: 2 QRVVEALRKEQIVCFPTDTLYALACSALSANSVQRLYEIKRRQYHKPIPILLNSLAAIRK 61
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
FA G+++ L PGPVT V+ ++ +L G ++GVR+P+ R I
Sbjct: 62 FASLKDEDWGIIERLSPGPVTFVVPLHDTQSLPGEFFRG--TVGVRIPNHAMARTILEEF 119
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A TSANL+G P + + C G STV D+ K+L
Sbjct: 120 GGPVAATSANLSGMPGARRAMEIPQEIRDCVSELMEDDSAVGGMCSTVFDVQ---SRKVL 176
Query: 208 RPGSAKEETIA 218
R G E IA
Sbjct: 177 RIGMFSEHKIA 187
>gi|398350470|ref|YP_006395934.1| tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
[Sinorhizobium fredii USDA 257]
gi|390125796|gb|AFL49177.1| putative tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
[Sinorhizobium fredii USDA 257]
Length = 324
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 101/184 (54%), Gaps = 4/184 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A L G+ +A+PT+T+YG A DA +++A++RIYE+KGR +PL V D++
Sbjct: 16 EKACAVLSEGEPVAIPTETVYGLAADATNADAISRIYEMKGRPRFNPLICHVSDMAMAEA 75
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
D + L ++ PGP+T++L + S + + GL+++G+R+P+ RVI
Sbjct: 76 HVAFDQISRRLAEAFWPGPLTLILPQRPESGVHALASAGLDTLGIRMPEGFSRRVIGH-F 134
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G+ S S E +L + + D G G ST++ + G ++
Sbjct: 135 GRPLAAPSANTSGRISPTSATHVEVDLGPKLKLILDAGPAEIGLE-STIIKVED-GSLRL 192
Query: 207 LRPG 210
LRPG
Sbjct: 193 LRPG 196
>gi|422810572|ref|ZP_16858983.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes FSL
J1-208]
gi|378751462|gb|EHY62052.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes FSL
J1-208]
Length = 345
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ G+ +A PT+T+YG DA + A+ +IYE KGR +PL + + + ++
Sbjct: 19 QEAAELLQNGECVAFPTETVYGLGADATNQAAIQKIYEAKGRPSDNPLIVHIARRNQMDS 78
Query: 88 FAVTDHLPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
FA + + P L+D PGP+T++L + S L +++ GL ++GVR+P+ +
Sbjct: 79 FAAS-YPPKAIQLMDKFWPGPLTIILPLKKDS-LATNVSAGLSTVGVRMPEHPVSLALIS 136
Query: 146 GLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+A SAN +G+PS + E+L + A + DGG G STV+D + L
Sbjct: 137 AANVPVAAPSANRSGKPSPTTADHVIEDLDGKIAGIIDGGATGVGLE-STVIDCS-LEIP 194
Query: 205 KILRPGSAKEETI 217
ILRPG +E I
Sbjct: 195 IILRPGGVTKEQI 207
>gi|452993492|emb|CCQ94991.1| tRNA(NNU) t(6)A37 threonylcarbamoyladenosine modification;
threonine-dependent ADP-forming ATPase [Clostridium
ultunense Esp]
Length = 357
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 104/194 (53%), Gaps = 12/194 (6%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA + L+ G+V+A PT+T+YG DA S +AV +IY KGR +PL + D +
Sbjct: 22 EAAKLLRQGEVVAFPTETVYGLGADAYSDQAVAKIYAAKGRPSDNPLILHFYDPGQVKE- 80
Query: 89 AVTDHLP---HGLLDSLLPGPVTVVL-SRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
V HLP L PGP+T++L + G +S+L + GL ++ VRVP+ +
Sbjct: 81 -VVTHLPPLAEELFRRFSPGPLTLILPNNGRASSLATA---GLSTVAVRVPNHPVALALL 136
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
R + LA SAN +G+PS +L R A + DGG G STV+D+T L
Sbjct: 137 REVGRPLAAPSANRSGKPSPTKAAHVLADLEGRIAGIIDGGETGIGLE-STVLDIT-LSP 194
Query: 204 FKILRPGSAKEETI 217
+ILRPG +E++
Sbjct: 195 PQILRPGGITKESL 208
>gi|339324751|ref|YP_004684444.1| translation factor Sua [Cupriavidus necator N-1]
gi|338164908|gb|AEI75963.1| translation factor Sua [Cupriavidus necator N-1]
Length = 329
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 114/209 (54%), Gaps = 16/209 (7%)
Query: 20 RPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICV 79
R T A +EA++ L+ G+++A PT+T+YG DA + EAV RI+ +KGR P+ + V
Sbjct: 4 RMPTAAELDEAVRLLEAGQLVAFPTETVYGLGADAENPEAVARIFALKGRPSNHPVIVHV 63
Query: 80 GDVSDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPD 136
D +DI + TD +P L+D+ PGP+T++L R ++++ ++ G +SIGVR P
Sbjct: 64 VDGADIGYW--TDEVPEAAQQLIDAFWPGPLTLILKR--AAHIHSAVAGGQDSIGVRCPS 119
Query: 137 SNFVRVI----ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAG 192
+ + RG +A SAN GQ S + + + + V +G + G
Sbjct: 120 HPVAQALLARFKRG-RGGIAAPSANKFGQVSPTTAQHVRDEFGDAVYVLEGDGVEVG-IE 177
Query: 193 STVVDLTRLGKF---KILRPGSAKEETIA 218
ST+VDL+RL + +LRPG+ +A
Sbjct: 178 STIVDLSRLDQGIGPVLLRPGAITAAMMA 206
>gi|313895787|ref|ZP_07829341.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas sp. oral taxon 137
str. F0430]
gi|312975212|gb|EFR40673.1| Sua5/YciO/YrdC/YwlC family protein [Selenomonas sp. oral taxon 137
str. F0430]
Length = 355
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 114/218 (52%), Gaps = 10/218 (4%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++ P EA A + ++ G ++A PT+T+YG + A RIY KGR +PL +
Sbjct: 5 IISPVREADIAYAARMIRDGALVAFPTETVYGLGASGLDAAACARIYAAKGRPSDNPLIL 64
Query: 78 CVGDVSDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRV 134
+ D+S A T +P LL + PGP+TV+L + ++++ + GL ++GVR
Sbjct: 65 HIADLSMAADAART--IPPAAAHLLTAFAPGPITVILPK--AAHIPDIVTGGLSTVGVRC 120
Query: 135 PDSNFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGS 193
PD + R + R +A SAN +G+PS + +V ++L R C+ DGG G S
Sbjct: 121 PDHDIARALIRAAGVPVAAPSANTSGRPSPTTAVMVADDLAGRIPCILDGGACRWG-VES 179
Query: 194 TVVDLTRLGKFKILRPGSAKEETIAILEKHSLVE-EPA 230
T+VD T G +LRPG+ E IA H V +PA
Sbjct: 180 TIVDCTEDGVVTVLRPGAVTREMIAAELPHMEVRVDPA 217
>gi|397772281|ref|YP_006539827.1| Sua5/YciO/YrdC/YwlC family protein [Natrinema sp. J7-2]
gi|397681374|gb|AFO55751.1| Sua5/YciO/YrdC/YwlC family protein [Natrinema sp. J7-2]
Length = 195
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 7/197 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A+++G ++ PT+T+YG A E V R++E+KGR T PL+ V V +
Sbjct: 5 DRAADAIESGALVVYPTETVYGLGGAALEPEPVERVFEVKGRDRTKPLSFAVPSVPSALQ 64
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ + + LPGPVTV+ R + + L G E +GVR+PD++ +
Sbjct: 65 YVRATDRERRFMATFLPGPVTVLCRR--RAAVPDELTAGRERVGVRIPDNDLALALCERA 122
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ + TSAN++G+ S+ + + + + E A V DGG G STVVD++ I
Sbjct: 123 GTPITATSANVSGRESARRLDELDPEIREAAAVVLDGGRTDGG-TESTVVDVS---SGTI 178
Query: 207 LRPGSAKEETIAILEKH 223
R G+ +E A LE+H
Sbjct: 179 HRRGAQADEIDAWLERH 195
>gi|395778566|ref|ZP_10459078.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella elizabethae
Re6043vi]
gi|423715122|ref|ZP_17689346.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella elizabethae F9251]
gi|395417774|gb|EJF84111.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella elizabethae
Re6043vi]
gi|395430606|gb|EJF96648.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella elizabethae F9251]
Length = 320
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 8/202 (3%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+RP +EAI L+ GK++AVPT+T+YG A DA + A++ I+ K R +PL
Sbjct: 3 IRPLNSVSIKEAIALLEQGKLVAVPTETVYGLAGDATNGRALSSIFSTKKRPQFNPLIAH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + R+ D L L+++ PGP+T+VL ++ GL ++ +R PDS
Sbjct: 63 VNGIEMAERYVEIDFLSRQLMEAFWPGPLTLVLPLKAQHDIHPLTTAGLNTLAIRFPDSR 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAG--STV 195
F ++ + LA SAN +G+ S S + F +L E + DGG P+ R G ST+
Sbjct: 123 FADIV-QCFGRPLAAPSANQSGRLSPTSAEAVFASLGESVPLILDGG--PT-RIGLESTI 178
Query: 196 VDLTRLGKFKILRPGSAKEETI 217
+ + + +LRPG + I
Sbjct: 179 IKVCGENIY-LLRPGGLATDKI 199
>gi|423711156|ref|ZP_17685476.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella washoensis Sb944nv]
gi|395415070|gb|EJF81505.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella washoensis Sb944nv]
Length = 320
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 4/200 (2%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P A +EA+ L+ GK++A+PT+T+YG A DA + AV I+ K R +PL +
Sbjct: 3 ILPFNSASIKEAVAFLERGKLVALPTETVYGLAGDATNGRAVASIFSAKKRPQFNPLIVH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + R+ D L L++ PGP+T+VL N+ GL ++ VR PDS
Sbjct: 63 VSSIIMAERYVEIDRLSRRLMEVFWPGPLTLVLPLKTHHNIHPLATSGLNTLAVRFPDSG 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F V+ R LA SAN +G+ S S + F +L + DGG G ST++
Sbjct: 123 FAEVV-RCFGRPLAAPSANQSGRLSPTSAEAVFASLGLSVPLILDGGFSKIGLE-STIIK 180
Query: 198 LTRLGKFKILRPGSAKEETI 217
+ + +LRPG E I
Sbjct: 181 VCDESVY-LLRPGGLAAEEI 199
>gi|392531970|ref|ZP_10279107.1| putative ribosome maturation factor; RNA binding protein
[Carnobacterium maltaromaticum ATCC 35586]
Length = 340
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 105/196 (53%), Gaps = 4/196 (2%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E + EA + ++ G+++A PT+T+YG DA + EAV ++Y KGR +PL + +
Sbjct: 8 ENNLSEAAKLIQAGELVAFPTETVYGLGADALNEEAVKKVYAAKGRPSDNPLIVHIASRE 67
Query: 84 DINRF-AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
++ A + L+ PGP+T++ + + S+ GLES+ +R+PD++
Sbjct: 68 ELESLVAEIPAIAEPLIKKFWPGPLTLIF-KAKPGVFSTSVTAGLESVAIRMPDNSLTLK 126
Query: 143 IARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ + E L SAN +G+PS S + + +L + A + DGG G STV+DLT
Sbjct: 127 LIQLAERPLVGPSANTSGRPSPTSAEHVYHDLEGKIAGIIDGGATGIGLE-STVLDLTSP 185
Query: 202 GKFKILRPGSAKEETI 217
ILRPG+ ++ +
Sbjct: 186 ENPLILRPGAITQQDL 201
>gi|160947260|ref|ZP_02094427.1| hypothetical protein PEPMIC_01193 [Parvimonas micra ATCC 33270]
gi|158446394|gb|EDP23389.1| Sua5/YciO/YrdC/YwlC family protein [Parvimonas micra ATCC 33270]
Length = 341
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 119/214 (55%), Gaps = 9/214 (4%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
+++P E + E + + + K++A+PT+T+YG + S AV++I++ K R +PL +
Sbjct: 4 ILKPTRE-NIERSAKLILNDKIVAIPTETVYGLGANGLSDIAVSKIFKAKNRPQDNPLIL 62
Query: 78 CVGDVSDINR--FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVP 135
+ D + + + D + L+ PGP+TVV+ + + + +++ GL+++ +R+P
Sbjct: 63 HISDYDMMENLVYELNDEIKE-FLNHFWPGPLTVVMKKKDI--IPDAISCGLDTVAIRMP 119
Query: 136 DSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGST 194
++ R + +A SAN++G+PS + +D F ++ + + + DGG+ G ST
Sbjct: 120 NNEIARSFIKQCGVPIAAPSANISGKPSPTTAEDVFTDMNGKISVILDGGLCNIG-IEST 178
Query: 195 VVDLTRLGKFKILRPGSAKEETIAILEKHSLVEE 228
V+DLT+ + ILRPG +E E L+++
Sbjct: 179 VLDLTK-KPYTILRPGFYTKEDFLKYEDEILIDD 211
>gi|315123100|ref|YP_004065106.1| putative translation factor [Pseudoalteromonas sp. SM9913]
gi|315016860|gb|ADT70197.1| putative translation factor [Pseudoalteromonas sp. SM9913]
Length = 335
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 18/196 (9%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
TE +A+ LK G+ +A+PT+T+YG A DA +S+AV +I+ KGR PL + + ++
Sbjct: 12 TEERINQAVALLKAGECVALPTETVYGLAADASNSDAVAKIFAAKGRPTNHPLIVHIPEL 71
Query: 83 S-------DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVP 135
S ++N+ A+T L ++ PGP+T++L+ + NL + GL SIG+RVP
Sbjct: 72 SHVHHWAKNVNKAAIT------LAEAFWPGPLTLILNAKD--NLNSPVTGGLNSIGLRVP 123
Query: 136 DSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGST 194
+ + L + LA SAN Q S ++ +L R + V +GG G ST
Sbjct: 124 AHPQFLAVLKQLNTGLAAPSANRYKQLSPINTAHVMRDLNGRISAVLEGGQCDVG-IEST 182
Query: 195 VVDLTRLGKFKILRPG 210
+VD T + +ILRPG
Sbjct: 183 IVDATT-EQLRILRPG 197
>gi|329767330|ref|ZP_08258855.1| hypothetical protein HMPREF0428_00552 [Gemella haemolysans M341]
gi|328836019|gb|EGF85710.1| hypothetical protein HMPREF0428_00552 [Gemella haemolysans M341]
Length = 343
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 105/188 (55%), Gaps = 10/188 (5%)
Query: 35 KTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA-VTDH 93
K GK+IA+PT+T+YG + +A + EAV++IYE KGR +PL + ++S ++ D
Sbjct: 26 KEGKLIAIPTETVYGLSANAMNDEAVSKIYEAKGRPSDNPLIVHFYEMSQLDSIVNYNDE 85
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+++ PGP+T++L+ +++ + K + GL ++ VR+P + R I + E LA
Sbjct: 86 NIKKLINNFWPGPMTLILNAKDNNGVSKKVTAGLNTLAVRMPSNITAREILKETEVLLAA 145
Query: 154 TSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAG----STVVDLTRLGKFKILRP 209
SAN +G+PS FE+++ D ++ ++ STV+D TR I RP
Sbjct: 146 PSANTSGKPSPTK---FEHVYHDLNGKID-VIIEDEQSDIGLESTVIDCTRYP-LVIARP 200
Query: 210 GSAKEETI 217
G +E I
Sbjct: 201 GEITKEDI 208
>gi|312899931|ref|ZP_07759249.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0470]
gi|311292927|gb|EFQ71483.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0470]
Length = 340
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S K + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAKHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|88607846|ref|YP_505359.1| Sua5/YciO/YrdC/YwlC family protein [Anaplasma phagocytophilum HZ]
gi|88598909|gb|ABD44379.1| Sua5/YciO/YrdC/YwlC family protein [Anaplasma phagocytophilum HZ]
Length = 200
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 29/199 (14%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EE + AL+ +++ PT+TLY AC+A S AV ++Y+IK R + P ++ +GD+ + +
Sbjct: 3 EEIVNALRNEEIVCFPTETLYALACNAFSERAVAKLYDIKRRLYDKPFSLMLGDIQQVKK 62
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
F+ + +++ L PGP+T +L + NL + +++GVR+PD I
Sbjct: 63 FSNMKNTDLRIMEMLSPGPITFILPLHYAQNLPRRFFK--DTLGVRIPDHALACNILSRF 120
Query: 148 ESALALTSANLTGQPSSVSVKDF--------ENLWE-------RCACVYD--------GG 184
E + TSANL+G+ ++ D LWE C+ V+D G
Sbjct: 121 EFPVVATSANLSGERDALKASDIPEELRMHVSKLWEDDSSVSGMCSTVFDMVSQKILRTG 180
Query: 185 VLPSGRAGSTVVDLTRLGK 203
+LPS S ++D GK
Sbjct: 181 MLPS----SKILDAINRGK 195
>gi|153802309|ref|ZP_01956895.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|124122134|gb|EAY40877.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 328
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 104/191 (54%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 18 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 77
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A T P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 78 EQLSEWA-TAIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 135 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 193
Query: 200 RLGKFKILRPG 210
F++LR G
Sbjct: 194 S-KPFRVLRAG 203
>gi|217963355|ref|YP_002349033.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes HCC23]
gi|290892704|ref|ZP_06555696.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes FSL
J2-071]
gi|386009258|ref|YP_005927536.1| translation factor, SUA5 type [Listeria monocytogenes L99]
gi|386027871|ref|YP_005948647.1| putative translation initiation protein [Listeria monocytogenes M7]
gi|404408918|ref|YP_006691633.1| translation factor, SUA5 type [Listeria monocytogenes SLCC2376]
gi|217332625|gb|ACK38419.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes HCC23]
gi|290557764|gb|EFD91286.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes FSL
J2-071]
gi|307572068|emb|CAR85247.1| translation factor, SUA5 type [Listeria monocytogenes L99]
gi|336024452|gb|AEH93589.1| putative translation initiation protein [Listeria monocytogenes M7]
gi|404243067|emb|CBY64467.1| translation factor, SUA5 type [Listeria monocytogenes SLCC2376]
Length = 345
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 107/199 (53%), Gaps = 7/199 (3%)
Query: 22 ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
+ +A +EA + L+ G+ +A PT+T+YG DA + A+ +IY KGR +PL + +
Sbjct: 13 SNQAIYQEAAELLQNGECVAFPTETVYGLGADATNQAAIQKIYAAKGRPSDNPLIVHIAR 72
Query: 82 VSDINRFAVTDHLPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
+ +N F V + P L++ PGP+TV+L + S L +++ GL ++GVR+P+
Sbjct: 73 LDQMNSF-VASYPPKAIQLMEKFWPGPLTVILPLKKDS-LAANVSAGLSTVGVRMPEHPV 130
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDL 198
+ +A SAN +G+PS + E+L + A + DGG G STV+D
Sbjct: 131 SLALINAANVPVAAPSANRSGKPSPTTADHVIEDLDGKIAGIIDGGATGVGLE-STVIDC 189
Query: 199 TRLGKFKILRPGSAKEETI 217
+ L ILRPG +E I
Sbjct: 190 S-LEMPIILRPGGITKEQI 207
>gi|227431144|ref|ZP_03913200.1| Sua5/YciO/YrdC/YwlC family protein [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227353096|gb|EEJ43266.1| Sua5/YciO/YrdC/YwlC family protein [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 337
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ EEA + ++ G+V+A PT+T+YG DA + A+ +++ KGR +PL + V D
Sbjct: 9 TKNDIEEASRLIQNGEVVAFPTETVYGLGADATNESAIKKVFVAKGRPADNPLIMTVADA 68
Query: 83 SDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ ++ F GL+D PG +T++L + N+ + GL+++ R+P ++ R
Sbjct: 69 AQLDEFVTISDQARGLMDHFWPGSLTIILPI-KPGNVSMLVTGGLQTVAFRLPANDAART 127
Query: 143 IARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ R + SAN +G+PS + + + ++ + A + D G G STV+D++ +
Sbjct: 128 LIRAAGVPIVGPSANTSGKPSPTTAQHVWHDMQNKIAGIVDDGPTQVG-VESTVIDMS-I 185
Query: 202 GKFKILRPGSAKE 214
ILRPG+ +
Sbjct: 186 STPIILRPGAVTQ 198
>gi|414082886|ref|YP_006991592.1| SUA5 domain-containing protein [Carnobacterium maltaromaticum
LMA28]
gi|412996468|emb|CCO10277.1| SUA5 domain protein [Carnobacterium maltaromaticum LMA28]
Length = 340
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 105/196 (53%), Gaps = 4/196 (2%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E + EA + ++ G+++A PT+T+YG DA + EAV ++Y KGR +PL + +
Sbjct: 8 ENNLSEAAKLIQAGELVAFPTETVYGLGADALNEEAVKKVYAAKGRPSDNPLIVHIARRE 67
Query: 84 DINRF-AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
++ A + L+ PGP+T++ + + S+ GLES+ +R+PD++
Sbjct: 68 ELESLVAEIPAIAEPLIKKFWPGPLTLIF-KAKPGFFSTSVTAGLESVAIRMPDNSLTLK 126
Query: 143 IARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ + E L SAN +G+PS S + + +L + A + DGG G STV+DLT
Sbjct: 127 LIQLAERPLVGPSANTSGRPSPTSAEHVYHDLEGKIAGIIDGGATGIGLE-STVLDLTSP 185
Query: 202 GKFKILRPGSAKEETI 217
ILRPG+ ++ +
Sbjct: 186 ENPLILRPGAITQQDL 201
>gi|337285303|ref|YP_004624777.1| sua5 superfamily-like protein [Pyrococcus yayanosii CH1]
gi|334901237|gb|AEH25505.1| sua5 superfamily-related protein [Pyrococcus yayanosii CH1]
Length = 340
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 10/192 (5%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + ++ GK++A PT+T+YG DA + AV RI+E K R +PL + + D + A
Sbjct: 19 AARLIREGKLVAFPTETVYGLGADALNERAVRRIFEAKNRPADNPLIVHIADFEQLKELA 78
Query: 90 VTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+P L + PGP+T+VL + E N+ + GL+++ VR+P + R
Sbjct: 79 --QEIPKEAKLLAERFWPGPLTLVLLKAE--NVPRVTTGGLDAVAVRMPAHEIALALIRL 134
Query: 147 LESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN++G+PS + + E+L+ + C+ DGG G STV+DLT
Sbjct: 135 SGKPIAAPSANISGRPSPTTAEHVAEDLYGKIECIVDGGETRIG-VESTVIDLTERPPV- 192
Query: 206 ILRPGSAKEETI 217
+LRPG E I
Sbjct: 193 LLRPGGLPLEDI 204
>gi|452205059|ref|YP_007485188.1| YrdC/Sua5 family protein [Dehalococcoides mccartyi BTF08]
gi|452112115|gb|AGG07846.1| YrdC/Sua5 family protein [Dehalococcoides mccartyi BTF08]
Length = 213
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 6/196 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E A+Q LK G V+ PTDT+Y A ++ AVNR+++IKGR +T L +GD+S
Sbjct: 11 EIQINRAVQVLKNGGVVIFPTDTVYAVGALARNTHAVNRVFDIKGRANTKGLPALIGDIS 70
Query: 84 DINRFA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
I++ A + L L PG +T+VL + ++ LE L G E++ +R+P+ V
Sbjct: 71 QIHQVAKIFPPLARKLAAEYWPGGLTLVLPKTDNIPLE--LTGGNETVAIRIPNQAAVIE 128
Query: 143 IARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ + + + TSANL+G SS++ + + L +R + DGG + SG ST+V +
Sbjct: 129 MLKRVAEPVTGTSANLSGCKSSLNASEAKIQLGDRVDFILDGGQV-SGGVESTIVAVNN- 186
Query: 202 GKFKILRPGSAKEETI 217
+ KI+R G+ KE I
Sbjct: 187 DELKIIRQGAIKESDI 202
>gi|113866600|ref|YP_725089.1| translation factor (SUA5) [Ralstonia eutropha H16]
gi|113525376|emb|CAJ91721.1| putative translation factor (SUA5) [Ralstonia eutropha H16]
Length = 325
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 113/206 (54%), Gaps = 16/206 (7%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A +EA++ L+ G+++A PT+T+YG DA + EAV RI+ +KGR P+ + V D
Sbjct: 3 TAAELDEAVRLLEAGQLVAFPTETVYGLGADAENPEAVARIFALKGRPSNHPVIVHVVDG 62
Query: 83 SDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
+DI + TD +P L+D+ PGP+T++L R ++++ ++ G +SIGVR P
Sbjct: 63 ADIGYW--TDEVPEAAQQLIDAFWPGPLTLILKR--AAHIHPAVAGGQDSIGVRCPSHPV 118
Query: 140 VRVI----ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTV 195
+ + RG +A SAN GQ S + + + + V +G + G ST+
Sbjct: 119 AQALLARFKRG-RGGIAAPSANKFGQVSPTTAQHVRDEFGDAVYVLEGDGVEVG-IESTI 176
Query: 196 VDLTRLGKF---KILRPGSAKEETIA 218
VDL+RL + +LRPG+ +A
Sbjct: 177 VDLSRLDQGIGPVLLRPGAITAAMMA 202
>gi|83941398|ref|ZP_00953860.1| Sua5/YciO/YrdC family protein [Sulfitobacter sp. EE-36]
gi|83847218|gb|EAP85093.1| Sua5/YciO/YrdC family protein [Sulfitobacter sp. EE-36]
Length = 314
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 98/200 (49%), Gaps = 3/200 (1%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ PA + A L+ G ++A+PT+T+YG DA + AV IYE KGR +PL I
Sbjct: 4 ILPADPSGISRAATLLQQGALVALPTETVYGLGADARNGTAVAGIYEAKGRPSFNPLIIH 63
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V DV R+ L + PGP+T+VL + L + GL+S+G+RVP
Sbjct: 64 VADVDQARRYGRWSDTAEILASAFWPGPMTLVLPLADGHGLSSLVTAGLDSVGIRVPAHP 123
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
R I R L +A SAN +G+ S+ + + L R A V D G G ST++
Sbjct: 124 TARAILRALGGPVAAPSANPSGKISATTAQHVLSGLGGRIAAVVDDGPCTVGLE-STIIG 182
Query: 198 LTRLGKFKILRPGSAKEETI 217
L + + +LR G E I
Sbjct: 183 LNQP-RPTLLRAGGLPSEAI 201
>gi|375083514|ref|ZP_09730533.1| Sua5 superfamily-related protein [Thermococcus litoralis DSM 5473]
gi|375083979|ref|ZP_09730991.1| Sua5 superfamily-related protein [Thermococcus litoralis DSM 5473]
gi|374741406|gb|EHR77832.1| Sua5 superfamily-related protein [Thermococcus litoralis DSM 5473]
gi|374741707|gb|EHR78126.1| Sua5 superfamily-related protein [Thermococcus litoralis DSM 5473]
Length = 341
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 10/192 (5%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + ++ GK++A PT+T+YG DA + AV RI+E KGR +PL I + + + +
Sbjct: 19 AARFIREGKLVAFPTETVYGLGADALNENAVKRIFEAKGRPPDNPLIIHIAEFDQV--YE 76
Query: 90 VTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ +P L + PGP+T+VL +G+ + + GLE++ +R+P + +
Sbjct: 77 LAREVPEKAKMLAEKFWPGPLTIVLPKGD--KVPYATTGGLETVAIRMPAHEIALALIKT 134
Query: 147 LESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+ +A SAN++G+PS + ++ + R C+ DGG G STV+DLT
Sbjct: 135 SKRPIAAPSANISGKPSPTLAEHVADDFYGRIECIIDGGETKIG-VESTVIDLTTEPPM- 192
Query: 206 ILRPGSAKEETI 217
+LRPG E I
Sbjct: 193 LLRPGGLPLEEI 204
>gi|13476186|ref|NP_107756.1| hypothetical protein mlr7439 [Mesorhizobium loti MAFF303099]
gi|14026946|dbj|BAB53542.1| mlr7439 [Mesorhizobium loti MAFF303099]
Length = 327
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 99/183 (54%), Gaps = 4/183 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A+ L G V+A+PT+T+YG A DA + V RI+E KGR +PL V D++ R
Sbjct: 15 ERALALLGDGDVVAIPTETVYGLAGDATNGIGVARIFEAKGRPRFNPLIAHVADMAMAER 74
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
AV D L L + PGP+T+VL + + + + GL++I +R+P +IA+ L
Sbjct: 75 IAVFDPLSKKLAQAFWPGPLTLVLPQRPGNGIHPLVTAGLDTIALRMPRGFGGDLIAK-L 133
Query: 148 ESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G+ S+ + + +L R V DGG P G ST+V G ++
Sbjct: 134 GRPLAAPSANSSGRISATTAQAVAADLGARIKLVVDGGATPVGLE-STIVKAEGAG-VRL 191
Query: 207 LRP 209
LRP
Sbjct: 192 LRP 194
>gi|399039213|ref|ZP_10734862.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium sp. CF122]
gi|398062899|gb|EJL54664.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium sp. CF122]
Length = 324
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 100/188 (53%), Gaps = 8/188 (4%)
Query: 28 EEAIQA----LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
++AI+A L G IA+PT+T+YG A DA + A+ IYE KGR +PL + D++
Sbjct: 12 QQAIEAGCAVLGDGFPIAIPTETVYGLAADATNPVAIAHIYETKGRPRFNPLICHMADLA 71
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
R A D + L ++ PGP+T+VL S + GL+++G+RVP F +
Sbjct: 72 MAERHAEFDPVSRALAEAFWPGPLTLVLPLKPESAIHSLATAGLDTVGIRVP-KGFAGEL 130
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
R LA SAN +G+ S+ S + +L ER + D G G ST+V + G
Sbjct: 131 IRAFGRPLAAPSANTSGKISATSAAHVDADLGERIKLILDAGASTVG-VESTIVKVEG-G 188
Query: 203 KFKILRPG 210
K ++LRPG
Sbjct: 189 KVRLLRPG 196
>gi|341820755|emb|CCC57055.1| SUA5 family translation factor [Weissella thailandensis fsh4-2]
Length = 342
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 102/184 (55%), Gaps = 4/184 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A +A++ G ++A PT+T+YG DA + +AV ++Y KGR +PL + V D ++
Sbjct: 13 DAAARAIQRGSLVAFPTETVYGLGADAYNEKAVGKVYAAKGRPSDNPLIVHVADPEQVSD 72
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
FA+ + L+ + PGP+T++L + L ++ GL+++ VR+PD++ R + R
Sbjct: 73 FAIVNERAQKLMSAYWPGPLTMILPV-KPGVLSMTVTGGLDTVAVRLPDNDATRQLIRES 131
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
L SAN +G+PS K + +L + A + D G G STV+DL+ +
Sbjct: 132 GKPLVGPSANTSGKPSPTLAKHVYHDLHGKIAGILDDGPTKIG-VESTVLDLSS-DMPAV 189
Query: 207 LRPG 210
LRPG
Sbjct: 190 LRPG 193
>gi|335047278|ref|ZP_08540299.1| Sua5/YciO/YrdC/YwlC family protein [Parvimonas sp. oral taxon 110
str. F0139]
gi|333761086|gb|EGL38641.1| Sua5/YciO/YrdC/YwlC family protein [Parvimonas sp. oral taxon 110
str. F0139]
Length = 341
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 121/214 (56%), Gaps = 9/214 (4%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
+++P T+ + E++ + +++A+PT+T+YG + S AV++I++ K R +PL +
Sbjct: 4 ILKP-TKENIEKSANLILNDEIVAIPTETVYGLGANGLSDVAVSKIFKAKNRPQDNPLIL 62
Query: 78 CVGDVSDINR--FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVP 135
+ D + + ++D + L+ PGP+TVV+ + E + +++ GL+++ +R+P
Sbjct: 63 HISDYDMMENLVYKLSDEIKE-FLNHFWPGPLTVVMKKEEI--IPDAVSCGLDTVAIRMP 119
Query: 136 DSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGST 194
++ R + +A SAN++G+PS + +D F ++ + + + DGG+ G ST
Sbjct: 120 NNEIARSFIKQCGVPIAAPSANISGKPSPTTAEDVFTDMNGKISAILDGGLCNIG-IEST 178
Query: 195 VVDLTRLGKFKILRPGSAKEETIAILEKHSLVEE 228
V+DLT+ + ILRPG +E E L+++
Sbjct: 179 VLDLTK-KPYTILRPGFYTKEDFLKYEDEILIDD 211
>gi|147669398|ref|YP_001214216.1| translation factor SUA5 [Dehalococcoides sp. BAV1]
gi|146270346|gb|ABQ17338.1| translation factor SUA5 [Dehalococcoides sp. BAV1]
Length = 213
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 6/196 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E A+Q LK G V+ PTDT+Y A ++ AVNR+++IKGR +T L +GD+S
Sbjct: 11 EIQINRAVQVLKNGGVVIFPTDTVYAVGALARNTHAVNRVFDIKGRANTKGLPALIGDIS 70
Query: 84 DINRFA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
I++ A + L L PG +T+VL + ++ LE L G E++ +R+P+ V
Sbjct: 71 QIHQVAKIFPLLARKLAAEYWPGGLTLVLPKTDNIPLE--LTGGNETVAIRIPNQAAVIE 128
Query: 143 IARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ + + + TSANL+G SS++ + + L +R + DGG + SG ST+V +
Sbjct: 129 MLKRVAEPVTGTSANLSGCKSSLNASEAKIQLGDRVDFILDGGQV-SGGVESTIVAVNN- 186
Query: 202 GKFKILRPGSAKEETI 217
+ KI+R G+ KE I
Sbjct: 187 DELKIIRQGAIKESDI 202
>gi|11498387|ref|NP_069615.1| hypothetical protein AF0781 [Archaeoglobus fulgidus DSM 4304]
gi|2649831|gb|AAB90461.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 309
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 112/217 (51%), Gaps = 14/217 (6%)
Query: 16 AGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPL 75
A ++ P+ E +A+ L+ G ++A PT+T+YG CDA + EA+ R+YEIKGR P
Sbjct: 2 AEVLEPSREG-IRKAVAVLRAGGIVAFPTETVYGMGCDATNEEALRRLYEIKGRSLNKPF 60
Query: 76 AICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVP 135
+ V + + A D L+++ PGP+T+VL +S + SL I VR+P
Sbjct: 61 IVGVWSRDYVGKIAEVDERAEKLMEAFFPGPLTLVL---KSKGVMPSLLSPKGKIAVRMP 117
Query: 136 DSNFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAG--S 193
+ L + + SANL+G+P S+ +E++ E D V + G S
Sbjct: 118 AHEVPLQLMEMLRKPIVVPSANLSGRP---SLMRWEHVVEELGSRIDAVVKGECKVGVES 174
Query: 194 TVVDLTRLGKFKILRPGSAKEETIAILEKH-SLVEEP 229
T+VDLT K+LR G+ E+I +KH +V EP
Sbjct: 175 TIVDLTETPA-KVLRVGAVSVESI---KKHVEVVVEP 207
>gi|358053648|ref|ZP_09147384.1| hypothetical protein SS7213T_10564 [Staphylococcus simiae CCM 7213]
gi|357256835|gb|EHJ07156.1| hypothetical protein SS7213T_10564 [Staphylococcus simiae CCM 7213]
Length = 348
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 109/204 (53%), Gaps = 9/204 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+E ++ G +I +PT+T+YG A +A +AV++IY+ KGR +PL + + D+ ++
Sbjct: 22 KEIKNVVEQGGLIGLPTETVYGLAANAKDEQAVSKIYKAKGRPSDNPLIVHIHDMKQLHD 81
Query: 88 FAVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
F D L+ + PGP++ +L E L + GLES+ VR+P + R I +
Sbjct: 82 FTYNIDPRVIELMTAFWPGPISFILPLKEGY-LCSKVTGGLESVAVRMPSHSVGRQILQA 140
Query: 147 LESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRA---GSTVVDLTRLGK 203
+ LA SANL+G+PS + FE+++ DG + + A STV+D T
Sbjct: 141 INEPLAAPSANLSGRPSPTT---FEHVYHDLNGRIDGIIQANQSAEGLESTVLDCTSF-P 196
Query: 204 FKILRPGSAKEETIAILEKHSLVE 227
FKI RPGS I + +S+VE
Sbjct: 197 FKIARPGSITASMIEQVIPNSVVE 220
>gi|398829558|ref|ZP_10587755.1| Sua5/YciO/YrdC/YwlC family protein [Phyllobacterium sp. YR531]
gi|398216485|gb|EJN03031.1| Sua5/YciO/YrdC/YwlC family protein [Phyllobacterium sp. YR531]
Length = 330
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 107/197 (54%), Gaps = 4/197 (2%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + L G+++A+PT+T+YG A DA + AV I+E KGR H +PL V D++ R+A
Sbjct: 15 AAEMLARGELVAIPTETVYGLAADATNGNAVAGIFEAKGRPHFNPLICHVSDIAMAERYA 74
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
D + L+D+ PGP+T+VL +++ + GL++I +R+P ++IA L
Sbjct: 75 KIDPVSRLLIDTFWPGPLTLVLPLKPDADIHPLVAAGLDTIALRMPRGVAGKIIA-ALGR 133
Query: 150 ALALTSANLTGQPSSVS-VKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
LA SAN +G+ S S + ++L + A + D G G ST+V + +LR
Sbjct: 134 PLAAPSANTSGKISGTSAIAVDQDLGAKIAMILDAGPSEVGLE-STIVKVDG-DTILMLR 191
Query: 209 PGSAKEETIAILEKHSL 225
PG E I + + +L
Sbjct: 192 PGGLAAEEIEAVTRQTL 208
>gi|395780224|ref|ZP_10460691.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella washoensis 085-0475]
gi|395419491|gb|EJF85791.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella washoensis 085-0475]
Length = 320
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 4/200 (2%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P A +EA+ L+ GK++A+PT+T+YG A DA + AV I+ K R +PL +
Sbjct: 3 ILPFNSASIKEAVVFLERGKLVALPTETVYGLAGDATNGRAVASIFSAKKRPQFNPLIVH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + R+ D L L++ PGP+T+VL N+ GL ++ VR PDS
Sbjct: 63 VSSIIMAERYVEIDRLSRRLMEVFWPGPLTLVLPLKTHHNIHPLATSGLNTLAVRFPDSG 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F V+ R LA SAN +G+ S S + F +L + DGG G ST++
Sbjct: 123 FAEVV-RCFGRPLAAPSANQSGRLSPTSAEAVFASLGLSVPLILDGGFSKIGLE-STIIK 180
Query: 198 LTRLGKFKILRPGSAKEETI 217
+ + +LRPG E I
Sbjct: 181 VCDESVY-LLRPGGLAAEEI 199
>gi|344213265|ref|YP_004797585.1| DNA binding protein [Haloarcula hispanica ATCC 33960]
gi|343784620|gb|AEM58597.1| DNA binding protein [Haloarcula hispanica ATCC 33960]
Length = 194
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 6/165 (3%)
Query: 35 KTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHL 94
+ G+++ PT+T+YG DA ++ AV R++E KGR+ P+++ V DV +
Sbjct: 12 RDGELVVYPTETVYGLGADALNANAVERVFEAKGRERDKPVSMAVPDVESAREYTHPSDR 71
Query: 95 PHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF-VRVIARGLESALAL 153
+ LPGPVTVV+ R ++ + L G + +GVRVPD + + ++A L
Sbjct: 72 ELAFMREFLPGPVTVVVERRDA--VPDVLVAGRDRVGVRVPDHDLALELLAE--TGPLTA 127
Query: 154 TSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDL 198
TSAN++G PS+ ++ + + ER A V D G G GSTVV++
Sbjct: 128 TSANISGNPSARTIDGLDTIRERAAVVLDAGETDGG-TGSTVVNV 171
>gi|435855124|ref|YP_007316443.1| Sua5/YciO/YrdC/YwlC family protein [Halobacteroides halobius DSM
5150]
gi|433671535|gb|AGB42350.1| Sua5/YciO/YrdC/YwlC family protein [Halobacteroides halobius DSM
5150]
Length = 346
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 109/198 (55%), Gaps = 7/198 (3%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
+++ +EA + L+ G+++A PT+T+YG +A +AV +I+ KGR +PL + + +
Sbjct: 11 SQSEVQEAAKLLQEGRLVAFPTETVYGLGANALDPQAVEKIFAAKGRPADNPLIVHIANQ 70
Query: 83 SDINRFAVTD--HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
+ + ++ L+D PGP+T+VL + +S + K GLE++ VR+P
Sbjct: 71 NKLEELISSELSKQAQKLIDEFWPGPLTLVLPK--ASKVPKITTGGLETVAVRMPKHPLA 128
Query: 141 RVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLT 199
+ + + LA SANL+G+PS +++ +L R + V DGG G STV+DL+
Sbjct: 129 QQLIEEAQVPLAAPSANLSGRPSPTIAQHVMTDLAGRISGVVDGGQTGIG-VESTVLDLS 187
Query: 200 RLGKFKILRPGSAKEETI 217
+ G +LRPG E +
Sbjct: 188 Q-GVPTLLRPGGVTYEQL 204
>gi|261252205|ref|ZP_05944778.1| YrdC family protein [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417955840|ref|ZP_12598847.1| putative translation factor [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260935596|gb|EEX91585.1| YrdC family protein [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342812180|gb|EGU47192.1| putative translation factor [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 319
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 111/188 (59%), Gaps = 13/188 (6%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A + L +G+++A+PT+T+YG A DA + EAV +I+ KGR PL + +G V +
Sbjct: 15 EQAKEILASGELVAIPTETVYGLAADASNPEAVKKIFAAKGRPANHPLIVHIGSVEQLTD 74
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN-FVRVI 143
+A TD +P + + + PGPVT++L++ E + + GLE+IGVR+P + F ++
Sbjct: 75 WA-TD-IPQEAYTIASAYWPGPVTLLLNKAEQAT--PVVTGGLETIGVRMPAHDVFASLL 130
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ G+ A+A SAN + S S + N L + A V DGG G ST++DLT+
Sbjct: 131 SSGM--AVAAPSANPYKKLSPTSAQHVMNSLGGKIAAVLDGGDCVHGLE-STIIDLTQR- 186
Query: 203 KFKILRPG 210
F++LR G
Sbjct: 187 PFRVLRTG 194
>gi|448481828|ref|ZP_21605143.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum arcis JCM 13916]
gi|445821527|gb|EMA71316.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum arcis JCM 13916]
Length = 209
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 98/184 (53%), Gaps = 16/184 (8%)
Query: 20 RPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICV 79
RP A A+ G+++ PT+T+YG DA ++AV R++E+KGR ++PL++ V
Sbjct: 9 RPDRSDELRAAAAAVDRGELVVYPTETVYGLGADALDADAVERVFELKGRDRSNPLSLGV 68
Query: 80 GDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
V D R+A + LPGPVTVV+ RG+ + +L G + +G+RVPD +
Sbjct: 69 ASVDDALRYARPTERAVAFARAFLPGPVTVVVERGDP--VPDALTAGRDRVGIRVPDHDL 126
Query: 140 VRVIARGLESA--LALTSANLTGQPSSVSVKDFENLWER----CACVYDGGVLPSGRAGS 193
R + L+ L TSAN++G + SV D +L +R A V D G P S
Sbjct: 127 ARAL---LDETGPLTATSANVSG---TGSVTDPADLDDRIRGGVAAVIDDGEAPGTE--S 178
Query: 194 TVVD 197
TVVD
Sbjct: 179 TVVD 182
>gi|297619997|ref|YP_003708102.1| Sua5/YciO/YrdC/YwlC family protein [Methanococcus voltae A3]
gi|297378974|gb|ADI37129.1| Sua5/YciO/YrdC/YwlC family protein [Methanococcus voltae A3]
Length = 209
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 13/153 (8%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++R E +A + LK G++ PTDT+YG A V+RIY+IK R + P +I
Sbjct: 3 IIRKGVEITLNDAKKYLKNGEIALCPTDTIYGICGYALDKNVVDRIYKIKNRDESKPFSI 62
Query: 78 CVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGL---ESIGVRV 134
+ SDI ++A +++ L++ LPGP+T++L + ES P + +G+R+
Sbjct: 63 SLQKKSDIQKYAKVNNVAKKLINKFLPGPITLILPKKESI-------PDYICKDYVGIRI 115
Query: 135 PDSNFVRVIARGLESALALTSANLTGQPSSVSV 167
PDS ++I E + TSAN++G+PSS S+
Sbjct: 116 PDS---KIILELSEIPITSTSANVSGRPSSYSI 145
>gi|23100449|ref|NP_693916.1| hypothetical protein OB2994 [Oceanobacillus iheyensis HTE831]
gi|22778682|dbj|BAC14950.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 339
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 119/212 (56%), Gaps = 16/212 (7%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
+++ +EA L+ G+ +A PT+T+YG DA + +AV++I++ KGR +PL V
Sbjct: 14 NQSYIKEAAGILQAGQTVAFPTETVYGLGADATNPQAVSKIFQAKGRPEDNPLIAHVATK 73
Query: 83 SDINRFAVTDHLPHGLLDSLL----PGPVTVVL-SRGESSNLEKSLNPGLESIGVRVPDS 137
+ R + +P G +D L+ PGP+T +L S G ++ ++ GL++IGVR+P+
Sbjct: 74 EQLQRLVTS--IP-GYVDKLIAAFSPGPLTFILPSNGICAS---NVTAGLDTIGVRIPNH 127
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTV 195
+ + ++ +A SAN++G+PS + F +L R A + DGG P+G STV
Sbjct: 128 PVALQLLKEVDIPIAAPSANISGKPSPTTADHVFNDLEGRIAGLVDGG--PTGVGLESTV 185
Query: 196 VDLTRLGKFKILRPGSAKEETIAILEKHSLVE 227
+D T+ ILRPG +E + + H LV+
Sbjct: 186 IDCTQEIPV-ILRPGGVTKENLESVIGHVLVD 216
>gi|354581614|ref|ZP_09000517.1| Sua5/YciO/YrdC/YwlC family protein [Paenibacillus lactis 154]
gi|353200231|gb|EHB65691.1| Sua5/YciO/YrdC/YwlC family protein [Paenibacillus lactis 154]
Length = 390
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 113/218 (51%), Gaps = 15/218 (6%)
Query: 4 SLENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRI 63
S+E+G + E + L+ EA + L G ++A PT+T+YG DA S+EAV RI
Sbjct: 37 SMESGSRTPEEEQALL---------EAGRVLAGGGLVAFPTETVYGLGADAGSTEAVERI 87
Query: 64 YEIKGRKHTSPLAICVGDVSDINRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKS 122
+ KGR +PL + + D+S ++ A+ + L+ + PGP+++VL + +
Sbjct: 88 FAAKGRPSDNPLIVHISDLSQLDDLALRVNDTERALMKAFWPGPLSLVLPV-KPGAVSSR 146
Query: 123 LNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVY 181
+ GL+++ VR+PD + R LA SAN +G+PS +++ E+L V
Sbjct: 147 VTAGLDTVAVRMPDHPAALALIRAAGCPLAAPSANRSGRPSPTLAGHVLEDLAGAIDGVL 206
Query: 182 DGGVLPSGRA-GSTVVDLTRLGKFKILRPGSAKEETIA 218
DGG P+G STVV G +LRPG E +A
Sbjct: 207 DGG--PAGVGVESTVVQAGEDGAVTVLRPGGVTAEQLA 242
>gi|407777534|ref|ZP_11124803.1| translation factor SUA5 [Nitratireductor pacificus pht-3B]
gi|407300783|gb|EKF19906.1| translation factor SUA5 [Nitratireductor pacificus pht-3B]
Length = 318
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A+ L G V+A+PT+T+YG + DA + EAV RIYE KGR +PL V D++ R
Sbjct: 13 RALDLLGAGAVVAIPTETVYGLSADATNGEAVARIYEAKGRPRFNPLIAHVADIAMAERL 72
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A L L ++ PGP+T+VL S + + GL++I +R P R IA L+
Sbjct: 73 AHFSPLARKLAEAFWPGPLTLVLPHRGGSGIHPLVTAGLDTIALRCPRGFAPRAIA-ALD 131
Query: 149 SALALTSANLTGQ-PSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
LA SAN +G+ ++ + +L +R + DGG G ST++ + K +L
Sbjct: 132 RPLAAPSANSSGRITATTAAAVAADLGDRIPLIVDGGATSVGLE-STILKVED-EKLTLL 189
Query: 208 RPGSAKEETI 217
RPG E I
Sbjct: 190 RPGGVAAEDI 199
>gi|374330011|ref|YP_005080195.1| sua5/YciO/YrdC/YwlC protein family:SUA5 domain protein
[Pseudovibrio sp. FO-BEG1]
gi|359342799|gb|AEV36173.1| Sua5/YciO/YrdC/YwlC protein family:SUA5 domain protein
[Pseudovibrio sp. FO-BEG1]
Length = 329
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 105/195 (53%), Gaps = 4/195 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++ AL GK++A+PT+T+YG A DA + +A IYE KGR +PL V +
Sbjct: 20 QDICDALSDGKLVAIPTETVYGLAADATNGKACAGIYEAKGRPSFNPLISHVDSLEAAQT 79
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A D L ++ PGP+T+VL + +S + GLE+I +RVP S +R + +
Sbjct: 80 HAFFDDRALKLAEAFWPGPLTLVLPKLPTSPVSDLAVAGLETIALRVPRSAVMRALCKRT 139
Query: 148 ESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SANL+G+ S + +D N L + + + D G P G ST+V L + +
Sbjct: 140 GLPLAAPSANLSGRISGTTAEDVINDLKDHLSYIIDSGATPVG-VESTIVSLVG-DRPTL 197
Query: 207 LRPGS-AKEETIAIL 220
LRPG A+E+ A+L
Sbjct: 198 LRPGGLAREDVEAVL 212
>gi|340030071|ref|ZP_08666134.1| Sua5/YciO/YrdC/YwlC family protein [Paracoccus sp. TRP]
Length = 318
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + L G+++A+PT+T+YG A DA + AV RIYE KGR +PL + + D++ R A
Sbjct: 16 AAELLARGELVAIPTETVYGLAGDARNPLAVARIYEAKGRPSFNPLIVHLPDIAAAGRIA 75
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
V L PG +T+VL E S + + GL ++ +RVP + + R +
Sbjct: 76 VLGPEALALAHRFWPGALTLVLPLREDSGIASLVTAGLSTVAIRVPAHPAAQELLRTFDG 135
Query: 150 ALALTSANLTGQPSSVSVKDFEN----LWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
LA SAN +G+ S + + L R A V D G P G ST+V T G+
Sbjct: 136 PLAAPSANPSGRVSPTTAAHVADPDTGLGGRIAAVLDAGACPVG-VESTIVGWTE-GRAA 193
Query: 206 ILRPGS-AKEETIAIL 220
+LRPG A EE A+L
Sbjct: 194 LLRPGGVAAEEIEAVL 209
>gi|429217441|ref|YP_007175431.1| Sua5/YciO/YrdC/YwlC family protein [Caldisphaera lagunensis DSM
15908]
gi|429133970|gb|AFZ70982.1| Sua5/YciO/YrdC/YwlC family protein [Caldisphaera lagunensis DSM
15908]
Length = 208
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 106/200 (53%), Gaps = 11/200 (5%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
P EA E A + +K G V+ +PTDT+YG D + +A+ ++YE+KGR+ PL I +G
Sbjct: 10 PDKEAIKEVA-KVIKNGGVVVIPTDTVYGLTADPFNEKAMRKVYEVKGREEGKPLPILLG 68
Query: 81 DVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
+ D L + PG +T+V + E S+ SIGVR+P+ F
Sbjct: 69 ESHDAFSLVKPSETFWKLARAFWPGSLTIVENLSEKVPSHLSI---WGSIGVRLPNCYFC 125
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVY-DGGVLPSGRAG--STVVD 197
R +AR + A+ TSAN++ S V+V++ N+ + +Y DGG R G STVV
Sbjct: 126 RALAREVGGAIIGTSANISHMKSPVNVEEAYNMLKDKVDLYVDGG---QARIGISSTVVS 182
Query: 198 LTRLGKFKILRPGSAKEETI 217
+ + KILR G+ KEE I
Sbjct: 183 IIN-KEIKILREGAIKEEDI 201
>gi|116493076|ref|YP_804811.1| translation factor SUA5 [Pediococcus pentosaceus ATCC 25745]
gi|421894489|ref|ZP_16324977.1| SUA5 domain protein [Pediococcus pentosaceus IE-3]
gi|116103226|gb|ABJ68369.1| translation factor SUA5 [Pediococcus pentosaceus ATCC 25745]
gi|385272579|emb|CCG90349.1| SUA5 domain protein [Pediococcus pentosaceus IE-3]
Length = 340
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 4/192 (2%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A QA+K G++++ PT+T+YG DA + EAV ++Y KGR +PL + V D +++ +FA
Sbjct: 13 AAQAIKAGELVSFPTETVYGLGADATNPEAVKKVYAAKGRPSDNPLIVHVADQTEVAKFA 72
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
D L+D PGP+T++L + + L + GL++ R P + + R
Sbjct: 73 NIDDKSKKLMDQFWPGPLTIILPIKKGA-LNSIVTGGLDTAAFRNPATQVTIDLIRAAGV 131
Query: 150 ALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
L SAN +G+PS + +L + A V D G G STV+D++ ILR
Sbjct: 132 PLVGPSANTSGKPSPTKPEHVLHDLDGKIAGVLDDGETTIG-VESTVLDMSSTTP-SILR 189
Query: 209 PGSAKEETIAIL 220
PG+ E+ +A L
Sbjct: 190 PGAITEQALAPL 201
>gi|160881865|ref|YP_001560833.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium phytofermentans
ISDg]
gi|160430531|gb|ABX44094.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium phytofermentans
ISDg]
Length = 352
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA++ LK G+++A PT+T+YG DA A RIYE KGR +PL + + ++ +
Sbjct: 19 KEAVELLKEGQLVAFPTETVYGLGGDALDKTAARRIYEAKGRPSDNPLIVHIANIEALKE 78
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
AV +P + L D PGP+T++L + + LE + GL+++ +R+P R +
Sbjct: 79 LAV--EVPEEAYRLADDFWPGPLTMILKKSDLVPLETT--GGLDTVAIRMPSDEIARRLI 134
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ LA SAN +G+PS+ + E+L + + DGG G ST+VDLT
Sbjct: 135 KESGLYLAAPSANKSGRPSTTKAEHVIEDLDGCVSMIIDGGSSTIGLE-STIVDLTGDNP 193
Query: 204 FKILRPGSAKEETI 217
ILRPG E +
Sbjct: 194 V-ILRPGFITREML 206
>gi|423394480|ref|ZP_17371681.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG2X1-1]
gi|423405352|ref|ZP_17382501.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG2X1-3]
gi|401658167|gb|EJS75666.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG2X1-1]
gi|401661254|gb|EJS78723.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG2X1-3]
Length = 346
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + LK + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G + ++
Sbjct: 22 QEAARLLKENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKTQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL+++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLKTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSKVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|160916151|ref|ZP_02078358.1| hypothetical protein EUBDOL_02178 [Eubacterium dolichum DSM 3991]
gi|158431875|gb|EDP10164.1| Sua5/YciO/YrdC/YwlC family protein [Eubacterium dolichum DSM 3991]
Length = 202
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 103/192 (53%), Gaps = 15/192 (7%)
Query: 26 HAEEAIQA----LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
+ +E IQA LK KVIA PTDT+YG EA+ + KGR P+ VG
Sbjct: 6 YHKEDIQAVVKQLKQKKVIAFPTDTVYGLGV-IYDEEALAALKYSKGRPENKPIPTMVGS 64
Query: 82 VSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
++ + AV + L + +PG T++L + +S + + G+E+IG+R+P +FV
Sbjct: 65 LAQMEEIAVLNEEAKKLAAAFMPGAFTMILKKKDS--VADFVTNGMETIGIRMPQDDFVL 122
Query: 142 VIARGLESALALTSANLTGQPSS-VSVKDFENLWERCACVYDGGVL--PSGRAGSTVVDL 198
+ R + S + +TSANL+G+ + V V+ L R DG VL G+ ST+VD+
Sbjct: 123 ELLRQVGSPMLVTSANLSGEATGLVDVQVLSQLDGRI----DGIVLGEAGGKVASTIVDM 178
Query: 199 TRLGKFKILRPG 210
T GK KILR G
Sbjct: 179 TS-GKLKILREG 189
>gi|157364237|ref|YP_001471004.1| Sua5/YciO/YrdC/YwlC family protein [Thermotoga lettingae TMO]
gi|157314841|gb|ABV33940.1| Sua5/YciO/YrdC/YwlC family protein [Thermotoga lettingae TMO]
Length = 338
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 102/197 (51%), Gaps = 6/197 (3%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
E +A Q +K G V+A PT+T+YG D + AV +I++IK R +PL I + D
Sbjct: 13 NEGILRKAAQTIKEGGVVAFPTETVYGLGADCFNISAVLKIFQIKNRPADNPLIIHIYDK 72
Query: 83 SDINRFAVTDHLPHG-LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
+ D + ++D PGPVT + + +N+ K + GLE++ +R+P +
Sbjct: 73 KQLEELVEGDIEQNSYVMDVFWPGPVTFIFRK--KANVPKEVTGGLETVAIRMPSHPVAQ 130
Query: 142 VIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
V R + +A SANL+G+PS + +L+ + DGG P G ST+VDL+R
Sbjct: 131 VFLRLSGTPVAAPSANLSGKPSPTRAEHVIADLYGSVDVIIDGGETPLGLE-STIVDLSR 189
Query: 201 LGKFKILRPGSAKEETI 217
+LRPG A E I
Sbjct: 190 DYPV-LLRPGPATIEEI 205
>gi|299143533|ref|ZP_07036613.1| Sua5/YciO/YrdC/YwlC family protein [Peptoniphilus sp. oral taxon
386 str. F0131]
gi|298518018|gb|EFI41757.1| Sua5/YciO/YrdC/YwlC family protein [Peptoniphilus sp. oral taxon
386 str. F0131]
Length = 349
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 100/192 (52%), Gaps = 8/192 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
E ALK GK++ PT+T+YG + A I+ KGR +PL + + ++S ++
Sbjct: 20 EITNALKNGKLVVFPTETVYGLGANGLDETACKNIFNAKGRPGDNPLILHIAEISQLDDL 79
Query: 89 AVTD--HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
V D L+D PGP+T++ + SS + ++ GL+++ VR+P R I +
Sbjct: 80 -VEDVSESARDLIDMFWPGPLTMIFKK--SSKIPDVVSAGLDTVAVRMPSHKIAREILKD 136
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SANL+G+PS S K FE+L + + DGG G STVVD+T +
Sbjct: 137 CMIPIAAPSANLSGKPSPTSFKRVFEDLDNKVDIIVDGGRADVG-IESTVVDMT-VNPPM 194
Query: 206 ILRPGSAKEETI 217
ILRPG E +
Sbjct: 195 ILRPGKVTTEDL 206
>gi|138896951|ref|YP_001127404.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus thermodenitrificans
NG80-2]
gi|134268464|gb|ABO68659.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus thermodenitrificans
NG80-2]
Length = 345
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 114/207 (55%), Gaps = 11/207 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+TG+VIA PT+T+YG DA ++ AV +I+ KGR +PL + V ++ +
Sbjct: 22 QEAAEWLRTGEVIAFPTETVYGLGADAANTTAVEKIFAAKGRPSDNPLIVHVASLAQVES 81
Query: 88 FAVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A + + L++ PGP+T+VL + + + E+ + GL ++ VR+PD +
Sbjct: 82 IAASIPPVAKTLMERFWPGPLTLVLPKRDGAVSER-VTAGLSTVAVRMPDHPLALALIEA 140
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGKF 204
ALA SAN +G+PS + +L R A V DGG P+G STV+D + G+
Sbjct: 141 SGLALAAPSANRSGRPSPTTAAHVLADLNGRIAGVIDGG--PTGVGVESTVLDCS--GEV 196
Query: 205 -KILRPGSAKEETIAILEKHSLVEEPA 230
ILRPG +E A+ E VEE A
Sbjct: 197 PTILRPGGVTKE--ALSEVIGRVEEAA 221
>gi|205375324|ref|ZP_03228114.1| SUA5 protein [Bacillus coahuilensis m4-4]
Length = 339
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 102/194 (52%), Gaps = 11/194 (5%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A + L+ +V+A PT+T+YG +A SSEAV +IYE KGR +PL + + D +
Sbjct: 17 QAAELLQRNEVVAFPTETVYGLGANATSSEAVRKIYEAKGRPSDNPLIVHIDDKRQLGDL 76
Query: 89 AVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
+P + L+D PGP+T++ ++ + + GL+++ +RVPD R I
Sbjct: 77 VA--EIPASAYLLMDEFWPGPLTIIFAK-KPGVFSDIVTAGLDTVAIRVPDHPVARAILH 133
Query: 146 GLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGK 203
+A SAN +G+PS + +L R A + DGG P+G STV+D T +
Sbjct: 134 ETNLPIAAPSANRSGRPSPTTAHHVATDLTGRIAGIVDGG--PTGVGVESTVIDCT-VTP 190
Query: 204 FKILRPGSAKEETI 217
ILRPG E I
Sbjct: 191 PMILRPGGVTAEQI 204
>gi|190570595|ref|YP_001974953.1| Sua5/YciO/YrdC/YwlC family protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019153|ref|ZP_03334960.1| Sua5/YciO/YrdC/YwlC family protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190356867|emb|CAQ54241.1| Sua5/YciO/YrdC/YwlC family protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995262|gb|EEB55903.1| Sua5/YciO/YrdC/YwlC family protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 195
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
E I A+K + PT+T+Y AC+A E++ +IY IK R PL+I V DV +
Sbjct: 4 EVINAIKNNLLACFPTETVYALACNALGKESIEKIYRIKKRSQNKPLSIFVSDVDSLTNI 63
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A L++ PGP+T +L ++S L +SIG+R+PD I L+
Sbjct: 64 AKVKEEYINLINYFSPGPMTYILPLQDNSILPNEF--FKDSIGIRIPDHPIAISILNELK 121
Query: 149 SALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ + TS N++G+ S +D +++ + + V + L SG ST++DLT K K+L
Sbjct: 122 TPVVATSINISGEKSICKARDIPQSIKQHLSAVIEDDELVSG-IESTIIDLTG-DKIKVL 179
Query: 208 RPGSAKEETI 217
R G +TI
Sbjct: 180 RKGKISLQTI 189
>gi|433776367|ref|YP_007306834.1| Sua5/YciO/YrdC/YwlC family protein [Mesorhizobium australicum
WSM2073]
gi|433668382|gb|AGB47458.1| Sua5/YciO/YrdC/YwlC family protein [Mesorhizobium australicum
WSM2073]
Length = 348
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A+ L G V+A+PT+T+YG A DA + V RI+E KGR +PL V D++ R
Sbjct: 36 EPALALLLGGDVVAIPTETVYGLAGDATNGIGVARIFEAKGRPRFNPLIAHVADMAMAER 95
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A D L L + PGP+T+VL + + + + GL++I VR+P +IAR L
Sbjct: 96 IASFDPLSRKLALAFWPGPLTLVLPQRPGNGIHPLVTAGLDTIAVRMPRGFGGDLIAR-L 154
Query: 148 ESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G+ S+ + + +L R V DGG P G ST+V + ++
Sbjct: 155 GRPLAAPSANSSGKISATTAQAVAADLGGRIKLVVDGGATPVGLE-STIVK-AEGERLRL 212
Query: 207 LRPGSAKEETIAILEKHSLVEEPAAG 232
LRPG + I + L+ AG
Sbjct: 213 LRPGGIAADEIEAAIRMELLRGGIAG 238
>gi|374636653|ref|ZP_09708211.1| Sua5/YciO/YrdC/YwlC family protein [Methanotorris formicicus
Mc-S-70]
gi|373558285|gb|EHP84636.1| Sua5/YciO/YrdC/YwlC family protein [Methanotorris formicicus
Mc-S-70]
Length = 204
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 19/201 (9%)
Query: 19 VRPATEAHAEEAIQALKT----GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSP 74
+ E EAI+ ++ GKVI TDTLYG +A AV ++YEIK R+
Sbjct: 5 INEMNEKEKMEAIRKIQKMILEGKVIICGTDTLYGICVNALDENAVKKVYEIKKREFGKY 64
Query: 75 LAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGL---ESIG 131
++I + D DI ++A + + ++D +PGP+T +L + K + P + + IG
Sbjct: 65 ISISLKDKEDIEKYAYVNDVAKKIIDKFMPGPITTILKK-------KDVIPDIVAEDYIG 117
Query: 132 VRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGR 190
+RVPD++ VR +A L TSAN++G+ S SV + E + + + D G +
Sbjct: 118 IRVPDNDVVRELAI---VPLTSTSANISGEESPTSVDEISEEIKKNVDVIVDTGKCKYSK 174
Query: 191 AGSTVVDLTRLGKFKILRPGS 211
ST++ + G+ +++R G+
Sbjct: 175 P-STIIKIYENGEVELIREGA 194
>gi|403236581|ref|ZP_10915167.1| Hypothetical protein B1040_12499 [Bacillus sp. 10403023]
Length = 347
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 15/197 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA L+ +V+A PT+T+YG +A S EAV +IYE KGR +PL + + + + +
Sbjct: 22 KEAANLLQADEVVAFPTETVYGLGANALSDEAVAKIYEAKGRPSDNPLIVHISTIGQLQQ 81
Query: 88 FAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS--NFVRV 142
A +P L+ PGP+T+VL R E++ + K + GLE++ +R+P +
Sbjct: 82 IA--QDIPEQAKSLIKKFWPGPLTLVLKRKENA-VSKKVTAGLETVAIRMPSHPVALALI 138
Query: 143 IARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
A GL LA SANL+G+PS K ++L + A + DGG G STV+D +
Sbjct: 139 TASGL--PLAAPSANLSGKPSPTLAKHVADDLTGKIAGILDGGATGVGLE-STVLDCS-- 193
Query: 202 GKFK-ILRPGSAKEETI 217
G ILRPG +E +
Sbjct: 194 GDIPVILRPGGVTKEQL 210
>gi|316932620|ref|YP_004107602.1| Sua5/YciO/YrdC/YwlC family protein [Rhodopseudomonas palustris
DX-1]
gi|315600334|gb|ADU42869.1| Sua5/YciO/YrdC/YwlC family protein [Rhodopseudomonas palustris
DX-1]
Length = 332
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 102/204 (50%), Gaps = 4/204 (1%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A+EA++AL+ G ++A PT+T+YG DA ++EAV R+Y KGR +PL V D+
Sbjct: 15 TATDADEAVRALRGGGLVAFPTETVYGLGADASNAEAVARLYAAKGRPSFNPLIAHVADL 74
Query: 83 SDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
A D L ++ PGP+T+VL + + ++ GL+S+ +RVP +
Sbjct: 75 DAARLIARFDTAALRLAETFWPGPLTLVLPKATNCSVCDLATAGLDSVALRVPSHPVAQA 134
Query: 143 IARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ R + SAN +G S + +L R + DGG + G ST+V L
Sbjct: 135 LLRAFGGPVVAPSANRSGHVSPTTAAHVAADLGGRIDVIVDGGPVMVG-VESTIVGC--L 191
Query: 202 GKFKILRPGSAKEETIAILEKHSL 225
G +LRPG E I + H L
Sbjct: 192 GAPVLLRPGGVPREAIERVLGHKL 215
>gi|83854875|ref|ZP_00948405.1| Sua5/YciO/YrdC family protein [Sulfitobacter sp. NAS-14.1]
gi|83842718|gb|EAP81885.1| Sua5/YciO/YrdC family protein [Sulfitobacter sp. NAS-14.1]
Length = 314
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 98/200 (49%), Gaps = 3/200 (1%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ PA + A L+ G ++A+PT+T+YG DA + AV IYE KGR +PL I
Sbjct: 4 ILPADPSGISRAATLLQQGALVALPTETVYGLGADARNGTAVAGIYEAKGRPSFNPLIIH 63
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V DV R+ L + PGP+T+VL + L + GL+S+G+RVP
Sbjct: 64 VADVDQARRYGRWSDTAEILASAFWPGPMTLVLPLADGHGLSSLVTAGLDSVGIRVPAHP 123
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
R I R L +A SAN +G+ S+ + + L R A V D G G ST++
Sbjct: 124 TARAILRALGGPVAAPSANPSGKISATTAQHVLSGLEGRIAAVVDDGPCTVGLE-STIIG 182
Query: 198 LTRLGKFKILRPGSAKEETI 217
L + + +LR G E I
Sbjct: 183 LNQ-PRPTLLRAGGLPSEAI 201
>gi|384044292|ref|YP_005492309.1| translation factor [Bacillus megaterium WSH-002]
gi|345441983|gb|AEN87000.1| Putative translation factor (SUA5) [Bacillus megaterium WSH-002]
Length = 346
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EEA L+ +V+A PT+T+YG DA S +AV++I+ KGR +PL + +GD ++
Sbjct: 22 EEAADLLRNHEVVAFPTETVYGLGGDATSDKAVDKIFAAKGRPSDNPLIVHIGDKEQLHT 81
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
F + +P ++D+ PGP+TV+L + + + + GL SI VR+P +
Sbjct: 82 F--VESIPSKAEKVIDAFWPGPLTVILPKKD--RVSDKVTAGLNSIAVRMPSHPVALALL 137
Query: 145 RGLESALALTSANLTGQPSSVSVKDFENLWE-RCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ ++ +A SANL+G+PS N E R + V DGG G STV+D T
Sbjct: 138 KKVDLPIAAPSANLSGKPSPTLAHHVMNDLEGRISGVVDGGATGVG-VESTVLDCTEEIP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG ++ +
Sbjct: 197 I-ILRPGGITQKEL 209
>gi|395766974|ref|ZP_10447512.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella doshiae NCTC 12862]
gi|395415586|gb|EJF82020.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella doshiae NCTC 12862]
Length = 320
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 106/210 (50%), Gaps = 8/210 (3%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P A +EAI+ L+ G+++A+PT+T+YG A DA + +AV I+ K R +PL +
Sbjct: 3 ILPLNSASIKEAIKLLEQGRLVALPTETVYGLAGDATNGKAVASIFYTKKRPQFNPLIVH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V V R+ D L L++ PGP+T VL ++ GL+++ +R P+
Sbjct: 63 VSGVDMAERYVEIDSLTRRLMEVFWPGPLTFVLPLKAHHDIHPLTTSGLDTLAIRFPEGG 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAG--STV 195
F V+ LA SAN +G+ S S + F +L + + DGG S R G ST+
Sbjct: 123 FAEVVEY-FGRPLAAPSANHSGRLSPTSAQAVFASLGDSVPLILDGG---SSRIGLESTI 178
Query: 196 VDLTRLGKFKILRPGSAKEETIAILEKHSL 225
+ + + +LRPG E I + SL
Sbjct: 179 IKVCDKNIY-LLRPGGISAEEIEKITGKSL 207
>gi|444918460|ref|ZP_21238531.1| YrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Cystobacter fuscus DSM 2262]
gi|444709826|gb|ELW50824.1| YrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Cystobacter fuscus DSM 2262]
Length = 204
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 100/192 (52%), Gaps = 12/192 (6%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H + A+ L G VIA PTDT YG CD S + + R+Y++KGR PL+I D+SD+
Sbjct: 19 HVQRAVDILSGGGVIAYPTDTYYGLGCDLGSKKGIERLYKLKGRDRKKPLSILCPDLSDV 78
Query: 86 NRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNL-EKSLNPGLESIGVRVPDSNFVRVIA 144
++A + + + L PG T +L E++ L + + + +G+RVPDS R +A
Sbjct: 79 AKYAHVSNFAYRTMKGLTPGAFTFIL---EATRLVPEVMMSKQKQVGIRVPDSELARALA 135
Query: 145 RGLESALALTSA-NLTGQP--SSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
GL L TSA + G+P + S+KD L + D GV + STVV L
Sbjct: 136 AGLGRPLVTTSATDAEGEPLTDARSIKD--ALGHGLDLILDAGV--TLLEASTVVSLIG- 190
Query: 202 GKFKILRPGSAK 213
+ ++LR G +
Sbjct: 191 DQLEVLRQGKGQ 202
>gi|424628948|ref|ZP_18067245.1| SUA5 domain protein, partial [Vibrio cholerae HC-51A1]
gi|408057634|gb|EKG92473.1| SUA5 domain protein, partial [Vibrio cholerae HC-51A1]
Length = 191
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 7/180 (3%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 10 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 69
Query: 83 SDINRFAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ +A TD P + L ++ PGP+T++L + + + + GLES+G+RVP +
Sbjct: 70 EQLSEWA-TDIAPEAYQLAEAFWPGPLTLLLPKAK--QVSPVVTGGLESVGIRVPAHPVL 126
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L R A V DGG G ST+VDLT
Sbjct: 127 LDILKTHRLAVAAPSANPYKKLSPTSAQQVLDGLNGRLAAVLDGGECQHGLE-STIVDLT 185
>gi|88601863|ref|YP_502041.1| Sua5/YciO/YrdC/YwlC [Methanospirillum hungatei JF-1]
gi|88187325|gb|ABD40322.1| translation factor SUA5 [Methanospirillum hungatei JF-1]
Length = 180
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 12/187 (6%)
Query: 39 VIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGL 98
++ PTDTLYG DA S EA+ +++E KGR++ P++I V D I A D +
Sbjct: 5 LVVYPTDTLYGLGADALSDEAILKVFEAKGREYHKPISIAVSDPDMIGAVAYVDEMAEQF 64
Query: 99 LDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANL 158
++ LPGPVT++L + L L G + IG+R P+ + ++ + TSANL
Sbjct: 65 IEEFLPGPVTLILP--ARNILSTRLTAGTKKIGIRYPNHEVALELISRYDTPITATSANL 122
Query: 159 TGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK-ILRPGSAKEETI 217
+G P V++ D N+ CA V P STVVDL +F+ I+R G+ E
Sbjct: 123 SGGPDPVTI-DLCNVPYDCAV----NVGPLSGTPSTVVDL----EFREIIRVGADIESVA 173
Query: 218 AILEKHS 224
+ L K S
Sbjct: 174 SFLAKWS 180
>gi|423618973|ref|ZP_17594806.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD115]
gi|401252449|gb|EJR58710.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD115]
Length = 347
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAARLLRENEAVAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ + +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVNEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSKVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|393723177|ref|ZP_10343104.1| putative translation factor [Sphingomonas sp. PAMC 26605]
Length = 344
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 94/182 (51%), Gaps = 4/182 (2%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+ +A+PT+T+YG + DA S AV RIYE KGR +PL + V D++ R A+ D +
Sbjct: 30 GQPVAIPTETVYGLSADATDSAAVARIYEAKGRPSFNPLIVHVLDLAAAERLAMFDPVAR 89
Query: 97 GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSA 156
L ++ PGP+T+VL + + ++ GL +I +RVP +R + LA SA
Sbjct: 90 ALAEAFWPGPLTLVLPLRAGAGIAAAVTAGLSTIALRVPAHRAMRALIAASGKPLAAPSA 149
Query: 157 NLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEE 215
N +G S +L R A V D G +G ST+V G K+LRPG E
Sbjct: 150 NASGGISPTRAGHVVSSLDGRIALVVDDGATAAGLE-STIV--ATAGGLKVLRPGPITAE 206
Query: 216 TI 217
+
Sbjct: 207 AL 208
>gi|116618871|ref|YP_819242.1| translation factor SUA5 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116097718|gb|ABJ62869.1| translation factor SUA5 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 337
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 105/195 (53%), Gaps = 8/195 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ EEA + ++ G+V+A PT+T+YG DA + A+ +++ KGR +PL + V D
Sbjct: 9 TKNDIEEASRLIQNGEVVAFPTETVYGLGADATNESAIKKVFVAKGRPADNPLIMTVADA 68
Query: 83 SDINRFAVTDHLPHGLLDSLLPGPVTVVL--SRGESSNLEKSLNPGLESIGVRVPDSNFV 140
+ ++ F GL+D PG +T++L G+ S L + GL+++ R+P ++
Sbjct: 69 AQLDEFVTISDQARGLMDHFWPGSLTIILPIKPGKVSML---VTGGLQTVAFRLPANDAA 125
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
R + R + SAN +G+PS + + + ++ + A + D G G STVVD++
Sbjct: 126 RTLIRAAGVPIVGPSANTSGKPSPTTAQHVWHDMQNKIAGIVDDGPTQVG-VESTVVDMS 184
Query: 200 RLGKFKILRPGSAKE 214
+ ILRPG+ +
Sbjct: 185 -ISTPIILRPGAVTQ 198
>gi|223983284|ref|ZP_03633477.1| hypothetical protein HOLDEFILI_00757 [Holdemania filiformis DSM
12042]
gi|223964777|gb|EEF69096.1| hypothetical protein HOLDEFILI_00757 [Holdemania filiformis DSM
12042]
Length = 201
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 103/199 (51%), Gaps = 12/199 (6%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ + + ++ L G V+A PTDT+YG A EA+ ++ E K R T P + V
Sbjct: 7 TKKDSAQIVEILNRGGVVAFPTDTVYGLAVRYDLKEAILKMKEAKQRPETKPFPMMVSSK 66
Query: 83 SDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ I R AVTD L+D +PG +T+V + +++ + G +IG+R+PD +FV
Sbjct: 67 AQIERVAVTDARSQKLIDQWMPGALTLVFKK--RPEIDELVTNGFPTIGIRMPDDDFVLE 124
Query: 143 IARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAG----STVVDL 198
I + L + SANL+GQPS + E + ++ D VL G +G STV D
Sbjct: 125 IINRVGVPLLVPSANLSGQPSCTTS---EEVLKQLDGRIDAVVL--GESGASTASTVCDT 179
Query: 199 TRLGKFKILRPGSAKEETI 217
T + KILR G K E +
Sbjct: 180 TG-DELKILRQGPIKLEDL 197
>gi|381337179|ref|YP_005174954.1| translation factor SUA5 [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|356645145|gb|AET30988.1| translation factor SUA5 [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 337
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 105/195 (53%), Gaps = 8/195 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ EEA + ++ G+V+A PT+T+YG DA + A+ +++ KGR +PL + V D
Sbjct: 9 TKNDIEEASRLIQNGEVVAFPTETVYGLGADATNESAIKKVFVAKGRPADNPLIMTVADA 68
Query: 83 SDINRFAVTDHLPHGLLDSLLPGPVTVVL--SRGESSNLEKSLNPGLESIGVRVPDSNFV 140
+ ++ F GL+D PG +T++L G+ S L + GL+++ R+P ++
Sbjct: 69 AQLDEFVTISDQARGLMDHFWPGSLTIILPIKPGKVSML---VTGGLQTVAFRLPANDAA 125
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
R + R + SAN +G+PS + + + ++ + A + D G G STVVD++
Sbjct: 126 RTLIRAAGVPIVGPSANTSGKPSPTTAQHVWHDMQNKIAGIVDDGPTQVG-VESTVVDMS 184
Query: 200 RLGKFKILRPGSAKE 214
+ ILRPG+ +
Sbjct: 185 -ISTPIILRPGAVTQ 198
>gi|392381795|ref|YP_005030992.1| putative translation factor (Sua5-like) [Azospirillum brasilense
Sp245]
gi|356876760|emb|CCC97537.1| putative translation factor (Sua5-like) [Azospirillum brasilense
Sp245]
Length = 323
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 5/199 (2%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
PAT A A +AL++G+++A PT+T+YG DA AV I+ KGR +PL V
Sbjct: 10 PATPAGLARAGEALRSGELVAFPTETVYGLGGDATDDRAVAAIFAAKGRPQFNPLIAHVP 69
Query: 81 DVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
D+ AV D L PGP+T+VL R + L ++ GL+S+ VRVP
Sbjct: 70 DLEAAEAIAVLDERAVELAHQFWPGPLTLVLPRRAEAGLSLLVSAGLDSVAVRVPAHPVA 129
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
+ + + +A SAN +G S + E+L +R + V GG G STV+DLT
Sbjct: 130 QALLKAASKPIAAPSANRSGAVSPTAPHHVIESLGDRVSMVVAGGKCQVG-VESTVLDLT 188
Query: 200 RLGKFKI-LRPGSAKEETI 217
G+ + LRPG+ E I
Sbjct: 189 --GETPVLLRPGAVLREEI 205
>gi|343500092|ref|ZP_08738008.1| putative translation factor [Vibrio tubiashii ATCC 19109]
gi|418478566|ref|ZP_13047666.1| translation factor [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342821296|gb|EGU56083.1| putative translation factor [Vibrio tubiashii ATCC 19109]
gi|384573808|gb|EIF04295.1| translation factor [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 319
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 10/187 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A L +G+++A+PT+T+YG A DA + EAV +I+ KGR PL + +G+V ++
Sbjct: 15 EQAKDILASGELVAIPTETVYGLAADASNPEAVKKIFAAKGRPANHPLIVHIGEVEQLSE 74
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+A +P + + + PGPVTV+L++ + + + GL++IG+R+P +
Sbjct: 75 WA--KDIPQEAYTIAKAYWPGPVTVLLNKADQAT--PVVTGGLDTIGIRMPAHEVFATLL 130
Query: 145 RGLESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ A+A SAN + S S + N L R A V DGG G ST++DLT+
Sbjct: 131 KSSGMAVAAPSANPYKKLSPTSAEHVLNSLGGRIAAVLDGGNCAHGLE-STIIDLTQ-KP 188
Query: 204 FKILRPG 210
F+ILR G
Sbjct: 189 FRILRSG 195
>gi|339496409|ref|ZP_08657385.1| translation factor SUA5 [Leuconostoc pseudomesenteroides KCTC 3652]
Length = 303
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 105/195 (53%), Gaps = 8/195 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ EEA + ++ G+V+A PT+T+YG DA + A+ +++ KGR +PL + V D
Sbjct: 9 TKNDIEEASRLIQNGEVVAFPTETVYGLGADATNESAIKKVFVAKGRPADNPLIMTVADA 68
Query: 83 SDINRFAVTDHLPHGLLDSLLPGPVTVVL--SRGESSNLEKSLNPGLESIGVRVPDSNFV 140
+ ++ F GL+D PG +T++L G+ S L + GL+++ R+P ++
Sbjct: 69 AQLDEFVTISDQARGLMDHFWPGSLTIILPIKPGKVSML---VTGGLQTVAFRLPANDAA 125
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
R + R + SAN +G+PS + + + ++ + A + D G G STVVD++
Sbjct: 126 RTLIRAAGVPIVGPSANTSGKPSPTTAQHVWHDMQNKIAGIVDDGPTQVG-VESTVVDMS 184
Query: 200 RLGKFKILRPGSAKE 214
+ ILRPG+ +
Sbjct: 185 -ISTPIILRPGAVTQ 198
>gi|87198152|ref|YP_495409.1| translation factor SUA5 [Novosphingobium aromaticivorans DSM 12444]
gi|87133833|gb|ABD24575.1| translation factor SUA5 [Novosphingobium aromaticivorans DSM 12444]
Length = 315
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 101/206 (49%), Gaps = 2/206 (0%)
Query: 14 NKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTS 73
K V P E A Q + G +AVPT+T+YG A A AV IY KGR +
Sbjct: 4 TKPSKVHPPDNHGLEHAAQVIAAGGTVAVPTETVYGLAARADDDAAVAGIYRAKGRPDFN 63
Query: 74 PLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVR 133
PL + V DV+ AV D L ++ PGP+T+VL R E + L +++ GL ++ +R
Sbjct: 64 PLIVHVPDVTAAEGLAVFDKRARALANAFWPGPLTMVLPRREGAALASAVSAGLPTVALR 123
Query: 134 VPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAG 192
P ++ + + LA SAN +G S S +L +R + DGG G
Sbjct: 124 CPAHPVMQALLKNCGLPLAAPSANRSGGVSPTSAAHVAASLGQRVDLILDGGETRQGIE- 182
Query: 193 STVVDLTRLGKFKILRPGSAKEETIA 218
ST+V + G + ILRPG E +IA
Sbjct: 183 STIVGMRDDGTWAILRPGPITEASIA 208
>gi|92119409|ref|YP_579138.1| hypothetical protein Nham_4009 [Nitrobacter hamburgensis X14]
gi|91802303|gb|ABE64678.1| translation factor SUA5 [Nitrobacter hamburgensis X14]
Length = 328
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 104/203 (51%), Gaps = 10/203 (4%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+RPA EA A++ L+ G ++A PT+T+YG DA ++EAV R+Y KGR +PL
Sbjct: 9 IRPAGEAATATAVRTLRDGGLVAFPTETVYGLGADAANAEAVARLYRAKGRPAFNPLIAH 68
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
VGD++ R A D L + PGP+T+VL + + GL++I +RVP
Sbjct: 69 VGDLAAAQRIARFDATALALASAFWPGPLTLVLPKAPRCPVADLATAGLDTIALRVPAHP 128
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVD 197
R I RG A+ SANL+G S + + +L R + DGG + G V+
Sbjct: 129 VARDILRGFGGAVVAPSANLSGHVSPTTAAHVQSDLAGRIDLIVDGGPVEVG------VE 182
Query: 198 LTRLGKFK---ILRPGSAKEETI 217
T +G F+ +LRPG I
Sbjct: 183 STIVGCFESPTLLRPGGIPRADI 205
>gi|395784727|ref|ZP_10464549.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella melophagi K-2C]
gi|395421987|gb|EJF88209.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella melophagi K-2C]
Length = 320
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P A +EA++ LK G+++A+PT+T+YG A DA + +AV I+ K R +PL +
Sbjct: 3 ILPLNSASIKEAVEVLKQGQLVALPTETVYGLAGDATNGKAVASIFTTKKRPQFNPLIVH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + + D L +++ PGP+T+VL + N+ GL+++ VR P
Sbjct: 63 VSSIVMAEHYVEIDLLSRRFMEAFWPGPLTLVLPLKVNHNIHPLTTSGLDTLAVRFPVGG 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F V+ + LA SAN +G SS S F +L + DGGV G ST++
Sbjct: 123 FAEVV-QHFGRPLAAPSANQSGGLSSTSAASVFASLGASVPLIIDGGVSKIGLE-STIIK 180
Query: 198 LTRLGKFKILRPGSAKEETIAILEKHSL 225
+ + +LRPG E I + SL
Sbjct: 181 VCNKNIY-LLRPGGVTAEEIEEVAGQSL 207
>gi|309791839|ref|ZP_07686326.1| Sua5/YciO/YrdC/YwlC family protein [Oscillochloris trichoides DG-6]
gi|308226161|gb|EFO79902.1| Sua5/YciO/YrdC/YwlC family protein [Oscillochloris trichoides DG6]
Length = 347
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 101/201 (50%), Gaps = 10/201 (4%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
PA A +EA L TG ++A PT+T+YG DA + AV RI+ KGR PL + +
Sbjct: 11 PANTATIQEAATILATGGLVAFPTETVYGLGADALNPTAVGRIFAAKGRPAEDPLIVHLA 70
Query: 81 DVSDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
D+SD+ R VT H P L PGP+T+VL RG + + + GLE++ VRVP
Sbjct: 71 DLSDLAR--VTPHCPPVVAHLAAHCWPGPLTLVLPRGPA--VPYRVTAGLETVAVRVPAH 126
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVV 196
R + + +A SAN G S + +L R V DGG G STV+
Sbjct: 127 PVARALIAAAGTPIAAPSANRFGHTSPTTAAHVLADLDGRIEMVLDGGPATLG-VESTVL 185
Query: 197 DLTRLGKFKILRPGSAKEETI 217
DL+ +LRPG ET+
Sbjct: 186 DLSA-PIPTLLRPGGVSLETL 205
>gi|88608553|ref|YP_506460.1| Sua5/YciO/YrdC/YwlC family protein [Neorickettsia sennetsu str.
Miyayama]
gi|88600722|gb|ABD46190.1| Sua5/YciO/YrdC/YwlC family protein [Neorickettsia sennetsu str.
Miyayama]
Length = 195
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 3/135 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
E + L+ G V+ PT+T+Y ACDA + A+ RIY+IK R L I V +SD+ F
Sbjct: 4 ETVSLLRVGGVVIFPTETVYALACDASNYRAMLRIYDIKQRNFRKSLPIMVAGISDLGSF 63
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A + L+ PGPVT +L R +S++L E + VRVPDS I RG +
Sbjct: 64 ASFNESQARLIQECCPGPVTFILKRKKSAHLRFRFP---EKVAVRVPDSKVALKILRGFK 120
Query: 149 SALALTSANLTGQPS 163
+ TS NL+G+P+
Sbjct: 121 RPVFATSVNLSGRPA 135
>gi|373459722|ref|ZP_09551489.1| Sua5/YciO/YrdC/YwlC family protein [Caldithrix abyssi DSM 13497]
gi|371721386|gb|EHO43157.1| Sua5/YciO/YrdC/YwlC family protein [Caldithrix abyssi DSM 13497]
Length = 391
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 104/193 (53%), Gaps = 5/193 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ I+ LK G VI PT+TLYG DA + +A+ R++ +K R P+++ V + + +
Sbjct: 17 KRTIEVLKNGGVIVYPTNTLYGLGVDAFNFKALERLFVVKHRSPNQPISLMVASLDQLEQ 76
Query: 88 -FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLN-PGLESIGVRVPDSNFVRVIAR 145
FAV + +L +LPG TV+L NL + P + +G RV + F + +
Sbjct: 77 LFAVMEPREKQILQKILPGKFTVILRSKFKKNLAHFASGPQADKVGFRVAELPFNQKLLL 136
Query: 146 GLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+ + TSAN++G+P++ +V++ +R + D G P + GST++D+T+ +
Sbjct: 137 KFGNPITSTSANISGKPNAATVQEIIAQFGDRLDLILDAGPAPDLK-GSTIIDMTK-RPY 194
Query: 205 KILRPGSAKEETI 217
ILR GS K+ +
Sbjct: 195 LILREGSVKKSKV 207
>gi|260891996|ref|YP_003238093.1| Sua5/YciO/YrdC/YwlC family protein [Ammonifex degensii KC4]
gi|260864137|gb|ACX51243.1| Sua5/YciO/YrdC/YwlC family protein [Ammonifex degensii KC4]
Length = 338
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 9/175 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EEA + L+ G+++A PT+T+YG A EA+ R++ +KGR PL + + D ++ R
Sbjct: 19 EEAGELLRRGELVAFPTETVYGLGAAATQDEALRRVFAVKGRPARKPLTLHLADPEEVFR 78
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ S PGP+T++L +S L SL G E++G+RVPD + +
Sbjct: 79 Y--VKEVPSTARRLISSFWPGPLTLILP--AASGLPPSLTAGGETVGIRVPDHAVAQELI 134
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDL 198
R LA SANL+G+P+ L + A V DGG P G STVV++
Sbjct: 135 RMAGLPLAAPSANLSGRPAPTKAAHVLAELGGKIAGVLDGGPTPLG-IESTVVEV 188
>gi|377809405|ref|YP_005004626.1| hypothetical protein PECL_658 [Pediococcus claussenii ATCC BAA-344]
gi|361056146|gb|AEV94950.1| hypothetical protein PECL_658 [Pediococcus claussenii ATCC BAA-344]
Length = 338
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 10/199 (5%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ +EA +A+K GK++A PT+T+YG DA + +AVN+++E KGR +PL + V D+
Sbjct: 6 TKQDIKEAAKAIKEGKLVAFPTETVYGLGADATNVQAVNQVFEAKGRPSDNPLIVHVADI 65
Query: 83 SDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ A + + L+ PGP+T++L S L+K + GL + R PD+
Sbjct: 66 KTVEELAEINKNAYNLMKRFWPGPLTIILPIKPGS-LDKVVTGGLTTAAFRNPDNKETID 124
Query: 143 IARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAG--STVVDL- 198
+ + L SAN +G+PS + +L + A V D G R G STV+D+
Sbjct: 125 LIKAAGVPLVGPSANTSGKPSPTKPEHVLHDLDGKIAGVLDDG---ETRIGVESTVIDVS 181
Query: 199 TRLGKFKILRPGSAKEETI 217
T++ ILRPG+ E I
Sbjct: 182 TKIP--AILRPGAVTVEQI 198
>gi|295105441|emb|CBL02985.1| translation factor SUA5 [Faecalibacterium prausnitzii SL3/3]
Length = 341
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 105/200 (52%), Gaps = 18/200 (9%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
V PA EA EA Q L+ G+++A+PT+T+YG A DA + AV I+ KGR +PL +
Sbjct: 7 VLPADEAGVAEAAQLLRQGQLVALPTETVYGIAADARNGAAVRNIFVAKGRPQDNPLIVH 66
Query: 79 V-------GDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIG 131
V G VS++ A L+ + PGP+T+++ RG + GL+++G
Sbjct: 67 VTGPEMLPGLVSEVPERA------QLLMAAFCPGPLTIIMPRG--PEVADECCAGLDTVG 118
Query: 132 VRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGR 190
+R+P R + + A A SANL+G+PS + +D F ++ R + DGG G
Sbjct: 119 IRMPSHPVARAVIQQSGCAFAAPSANLSGKPSPTNAQDVFTDMDGRLPLILDGGECDVG- 177
Query: 191 AGSTVVDLTRLGKFKILRPG 210
STVV + K + RPG
Sbjct: 178 VESTVVSVVG-DKPTLFRPG 196
>gi|343520787|ref|ZP_08757756.1| Sua5/YciO/YrdC/YwlC family protein [Parvimonas sp. oral taxon 393
str. F0440]
gi|343397745|gb|EGV10279.1| Sua5/YciO/YrdC/YwlC family protein [Parvimonas sp. oral taxon 393
str. F0440]
Length = 341
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 121/214 (56%), Gaps = 9/214 (4%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
+++P T+ + E++ + +++A+PT+T+YG + S AV++I++ K R +PL +
Sbjct: 4 ILKP-TKENIEKSANLILNDEIVAIPTETVYGLGANGLSDIAVSKIFKAKNRPQDNPLIL 62
Query: 78 CVGDVSDINR--FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVP 135
+ D + + + + D + L+ PGP+TV++ + + + +++ GL+++ +R+P
Sbjct: 63 HISDYEMMEKLVYELNDDIKE-FLNYFWPGPLTVIMKKKDI--IPDAVSCGLDTVAIRMP 119
Query: 136 DSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGST 194
++ R + +A SAN++G+PS + +D F ++ + + + DGG+ G ST
Sbjct: 120 NNEIARSFIKQCGVPIAAPSANISGKPSPTTAEDVFTDMNGKISVILDGGLCNIG-IEST 178
Query: 195 VVDLTRLGKFKILRPGSAKEETIAILEKHSLVEE 228
V+DLT+ + ILRPG +E E L+++
Sbjct: 179 VLDLTK-KPYTILRPGFYTKEDFLKYEDEILIDD 211
>gi|422719968|ref|ZP_16776591.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0017]
gi|422741616|ref|ZP_16795641.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX2141]
gi|428767712|ref|YP_007153823.1| translation factor, Sua5/YciO/YrdC/YwlC family [Enterococcus
faecalis str. Symbioflor 1]
gi|315032689|gb|EFT44621.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0017]
gi|315143716|gb|EFT87732.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX2141]
gi|427185885|emb|CCO73109.1| translation factor, Sua5/YciO/YrdC/YwlC family [Enterococcus
faecalis str. Symbioflor 1]
Length = 340
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|295687746|ref|YP_003591439.1| Sua5/YciO/YrdC/YwlC family protein [Caulobacter segnis ATCC 21756]
gi|295429649|gb|ADG08821.1| Sua5/YciO/YrdC/YwlC family protein [Caulobacter segnis ATCC 21756]
Length = 325
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 95/189 (50%), Gaps = 3/189 (1%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+A E A AL+ G ++ +PT+T+YG DA + AV I+E KGR +PL V D+
Sbjct: 20 QAEIEAAASALRAGGLVILPTETVYGLGADAANPTAVAAIFEAKGRPRFNPLIAHVADLE 79
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
R A DH L PGP+T+V ++S + GL+++ +RVP R +
Sbjct: 80 TAERIADFDHRARDLAREFWPGPLTIVAPIKDASVVCDLARAGLDTVAIRVPGHPVSRAV 139
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
A+ SAN +G+PS + D ++ A DGG G STVV + G
Sbjct: 140 LAAFGGAVVAPSANRSGRPSPTTYADAMAETGDKAAAALDGGPCAVGLE-STVVSVLD-G 197
Query: 203 KFKILRPGS 211
+ ++LRPG+
Sbjct: 198 QARLLRPGA 206
>gi|190890611|ref|YP_001977153.1| translation factor protein [Rhizobium etli CIAT 652]
gi|190695890|gb|ACE89975.1| probable translation factor protein [Rhizobium etli CIAT 652]
Length = 334
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 93/188 (49%), Gaps = 4/188 (2%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+A E A AL G IA+PT+T+YG A DA + A+ RIYE KGR +PL + D++
Sbjct: 22 QAALEAASTALADGFAIAMPTETVYGLAADATNPAAITRIYETKGRPRFNPLICHMADLA 81
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
A D L L ++ PGP+T+VL S + GL+S+GVRVP F +
Sbjct: 82 MAEHHAAFDPLSRALAEAFWPGPLTLVLPLKPESPIHSLATAGLDSVGVRVP-KGFAGAL 140
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
LA SAN +G S+ S E +L + + D G PS + +
Sbjct: 141 IGAFGRPLAAPSANTSGAISATSAAHVEADLGAKIPLILDAG--PSAVGVESTIVKVEGD 198
Query: 203 KFKILRPG 210
+ ++LRPG
Sbjct: 199 RVRLLRPG 206
>gi|423376879|ref|ZP_17354163.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG1O-2]
gi|423621634|ref|ZP_17597412.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD148]
gi|401262932|gb|EJR69066.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD148]
gi|401639973|gb|EJS57706.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG1O-2]
Length = 346
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAARLLRENEAVAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ + +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVNEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSEIP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|319784740|ref|YP_004144216.1| Sua5/YciO/YrdC/YwlC family protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170628|gb|ADV14166.1| Sua5/YciO/YrdC/YwlC family protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 355
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 100/183 (54%), Gaps = 4/183 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A+ L+ G V+A+PT+T+YG A DA + V RI+E KGR +PL V D++ R
Sbjct: 43 ERALALLREGDVVAIPTETVYGLAGDATNGIGVARIFEAKGRPRFNPLIAHVADMAMAER 102
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A+ D L L + PGP+T+VL + + + + GL++I +R+P +IAR L
Sbjct: 103 LALFDPLSKKLARAFWPGPLTLVLPQRPGNGIHPLVTAGLDTIALRMPRGFGGDLIAR-L 161
Query: 148 ESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G+ S+ + + +L R V DGG P G ST++ + ++
Sbjct: 162 GRPLAAPSANSSGRISATTAQAVAADLGARIKLVVDGGATPVGLE-STILK-AEGERMRL 219
Query: 207 LRP 209
LRP
Sbjct: 220 LRP 222
>gi|224477104|ref|YP_002634710.1| hypothetical protein Sca_1619 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421711|emb|CAL28525.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 348
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 9/201 (4%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
P +A EE + + G+++A+PT+T+YG +A V +IYE KGR +PL + +
Sbjct: 16 PNAKAAIEEIAEVYREGELVAIPTETVYGLGANAKDDATVKKIYEAKGRPSDNPLIVHIY 75
Query: 81 DVSDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
D + ++ F +P L+D PGP++ +L E L K ++ GL SI VR+P
Sbjct: 76 DEAQMDDFIT--EIPEKAQQLMDVFWPGPISFILPLKEGF-LCKRVSGGLSSIAVRMPSH 132
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVV 196
R I + + +A SANL+G+PS + + +L + A + +G G STV+
Sbjct: 133 PVGRAILKAVRLPIAAPSANLSGRPSPTTFEHVNHDLNGKVAGIVNGDQSEEGLE-STVL 191
Query: 197 DLTRLGKFKILRPGSAKEETI 217
D T+ F+I RPG+ E I
Sbjct: 192 DCTQY-PFRIARPGAITAEMI 211
>gi|251799799|ref|YP_003014530.1| Sua5/YciO/YrdC/YwlC family protein [Paenibacillus sp. JDR-2]
gi|247547425|gb|ACT04444.1| Sua5/YciO/YrdC/YwlC family protein [Paenibacillus sp. JDR-2]
Length = 356
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 109/206 (52%), Gaps = 4/206 (1%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EEA L+ G+++A PT+T+YG DA ++ AV I++ KGR +PL + + D + +
Sbjct: 23 EEAASLLRDGELVAFPTETVYGLGADARNTTAVEGIFKAKGRPSDNPLIVHIADENQLAE 82
Query: 88 FAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ L L+ L PGP+T+VL + + + GL ++G+R+PD + R
Sbjct: 83 LVLPYPELAGRLMKELWPGPLTIVLPV-RTGAVSPLVTAGLTTVGIRMPDHPAALALIRQ 141
Query: 147 LESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN +G+PS +++ E+L + + + DGG G STV++L +
Sbjct: 142 SGCPVAAPSANRSGRPSPTLAAHVLEDLAGKISGIVDGGATGVGLE-STVIELPDSNTIR 200
Query: 206 ILRPGSAKEETIAILEKHSLVEEPAA 231
ILRPG E + ++++ PAA
Sbjct: 201 ILRPGGITAEQLRSAAPEAVIDAPAA 226
>gi|29377040|ref|NP_816194.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis V583]
gi|227554050|ref|ZP_03984097.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis HH22]
gi|229549322|ref|ZP_04438047.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ATCC
29200]
gi|255972031|ref|ZP_05422617.1| translation factor SUA5 [Enterococcus faecalis T1]
gi|256763195|ref|ZP_05503775.1| translation factor SUA5 [Enterococcus faecalis T3]
gi|256957796|ref|ZP_05561967.1| translation factor SUA5 [Enterococcus faecalis DS5]
gi|256963676|ref|ZP_05567847.1| translation factor SUA5 [Enterococcus faecalis HIP11704]
gi|257079734|ref|ZP_05574095.1| translation factor SUA5 [Enterococcus faecalis JH1]
gi|257084462|ref|ZP_05578823.1| translation factor SUA5 [Enterococcus faecalis Fly1]
gi|257419963|ref|ZP_05596957.1| translation factor SUA5 [Enterococcus faecalis T11]
gi|294779686|ref|ZP_06745076.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis PC1.1]
gi|300860679|ref|ZP_07106766.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TUSoD
Ef11]
gi|307271622|ref|ZP_07552893.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0855]
gi|312953586|ref|ZP_07772423.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0102]
gi|384519359|ref|YP_005706664.1| SUA5 domain protein [Enterococcus faecalis 62]
gi|397700692|ref|YP_006538480.1| SUA5 domain protein [Enterococcus faecalis D32]
gi|422693341|ref|ZP_16751355.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0031]
gi|422698997|ref|ZP_16756872.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX1346]
gi|422701252|ref|ZP_16759093.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX1342]
gi|422709735|ref|ZP_16767081.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0027]
gi|422714148|ref|ZP_16770884.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0309A]
gi|422717024|ref|ZP_16773721.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0309B]
gi|422725864|ref|ZP_16782321.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0312]
gi|422866788|ref|ZP_16913399.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX1467]
gi|29344506|gb|AAO82264.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis V583]
gi|227176798|gb|EEI57770.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis HH22]
gi|229305559|gb|EEN71555.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ATCC
29200]
gi|255963049|gb|EET95525.1| translation factor SUA5 [Enterococcus faecalis T1]
gi|256684446|gb|EEU24141.1| translation factor SUA5 [Enterococcus faecalis T3]
gi|256948292|gb|EEU64924.1| translation factor SUA5 [Enterococcus faecalis DS5]
gi|256954172|gb|EEU70804.1| translation factor SUA5 [Enterococcus faecalis HIP11704]
gi|256987764|gb|EEU75066.1| translation factor SUA5 [Enterococcus faecalis JH1]
gi|256992492|gb|EEU79794.1| translation factor SUA5 [Enterococcus faecalis Fly1]
gi|257161791|gb|EEU91751.1| translation factor SUA5 [Enterococcus faecalis T11]
gi|294453240|gb|EFG21652.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis PC1.1]
gi|300849718|gb|EFK77468.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TUSoD
Ef11]
gi|306511500|gb|EFM80499.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0855]
gi|310628424|gb|EFQ11707.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0102]
gi|315035854|gb|EFT47786.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0027]
gi|315151853|gb|EFT95869.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0031]
gi|315159266|gb|EFU03283.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0312]
gi|315170193|gb|EFU14210.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX1342]
gi|315172488|gb|EFU16505.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX1346]
gi|315574710|gb|EFU86901.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0309B]
gi|315580978|gb|EFU93169.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0309A]
gi|323481492|gb|ADX80931.1| SUA5 domain protein [Enterococcus faecalis 62]
gi|329578088|gb|EGG59501.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX1467]
gi|397337331|gb|AFO45003.1| SUA5 domain protein [Enterococcus faecalis D32]
Length = 340
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|384513897|ref|YP_005708990.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis OG1RF]
gi|430356853|ref|ZP_19425120.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis OG1X]
gi|430368327|ref|ZP_19428151.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis M7]
gi|327535786|gb|AEA94620.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis OG1RF]
gi|429514064|gb|ELA03620.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis OG1X]
gi|429516357|gb|ELA05850.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis M7]
Length = 340
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|422734542|ref|ZP_16790830.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX1341]
gi|315168546|gb|EFU12563.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX1341]
Length = 340
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|153007869|ref|YP_001369084.1| Sua5/YciO/YrdC/YwlC family protein [Ochrobactrum anthropi ATCC
49188]
gi|151559757|gb|ABS13255.1| Sua5/YciO/YrdC/YwlC family protein [Ochrobactrum anthropi ATCC
49188]
Length = 332
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 8/205 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL V ++ R
Sbjct: 22 QRAVEVLRRGGLVAIPTETVYGLAADAANGEGVAGIFAAKGRPQFNPLIAHVSGIAMAER 81
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVI 143
+ D L L + PGP+T+VL + + ++ ++P GL ++ +R+P VR I
Sbjct: 82 YVTFDALSRKLAEMFWPGPLTIVLPLKDRQDTDRPIHPLVTAGLSTLAIRMPLGR-VRDI 140
Query: 144 ARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
GL+S +A SAN +G+ S S + ++L + + D G P G + +
Sbjct: 141 IEGLDSPVAAPSANTSGRISPTSARAVADDLGNKLDLILDAG--PCGVGVESTIVKVDGN 198
Query: 203 KFKILRPGSAKEETIAILEKHSLVE 227
K +LRPG E I + LV
Sbjct: 199 KVHLLRPGGLAAEEIEAVIGEKLVR 223
>gi|257087539|ref|ZP_05581900.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis D6]
gi|422724657|ref|ZP_16781133.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX2137]
gi|256995569|gb|EEU82871.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis D6]
gi|315025304|gb|EFT37236.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX2137]
Length = 340
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNKAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|448509956|ref|ZP_21615837.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum distributum JCM
9100]
gi|448522048|ref|ZP_21618313.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum distributum JCM
10118]
gi|445696297|gb|ELZ48388.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum distributum JCM
9100]
gi|445702322|gb|ELZ54276.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum distributum JCM
10118]
Length = 209
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 97/184 (52%), Gaps = 16/184 (8%)
Query: 20 RPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICV 79
RP A A+ G+ + PT+T+YG DA ++AV R++E+KGR ++PL++ V
Sbjct: 9 RPDRSDELRAAAAAVDRGEPVVYPTETVYGLGADALDADAVERVFELKGRDRSNPLSLGV 68
Query: 80 GDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
V D R+A + LPGPVTVV+ RG+ + +L G + +G+RVPD +
Sbjct: 69 ASVDDALRYARPTERAVAFARAFLPGPVTVVVERGDP--VPDALTAGRDRVGIRVPDHDL 126
Query: 140 VRVIARGLESA--LALTSANLTGQPSSVSVKDFENLWER----CACVYDGGVLPSGRAGS 193
R + L+ L TSAN++G + SV D +L +R A V D G P S
Sbjct: 127 ARAL---LDETGPLTATSANVSG---TGSVTDPADLDDRIRGGVAAVIDDGEAPGTE--S 178
Query: 194 TVVD 197
TVVD
Sbjct: 179 TVVD 182
>gi|312114717|ref|YP_004012313.1| Sua5/YciO/YrdC/YwlC family protein [Rhodomicrobium vannielii ATCC
17100]
gi|311219846|gb|ADP71214.1| Sua5/YciO/YrdC/YwlC family protein [Rhodomicrobium vannielii ATCC
17100]
Length = 320
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 96/193 (49%), Gaps = 6/193 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A L++G ++A PT+T+YG DA + AV RI+E KGR +PL + V D R
Sbjct: 11 ERAAHILRSGGLVAFPTETVYGLGADATNGVAVARIFEAKGRPRFNPLIVHVPDADAARR 70
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLS--RGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
FAV D L PGP+T+VL R L + GL+++ +RVP R +
Sbjct: 71 FAVFDAEADALAARFWPGPLTLVLPLRRDVEQPLSDLVTAGLDTVAIRVPHHPVARALLE 130
Query: 146 GLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+A SAN++G+ S E++ R + DGG +G ST+V L +
Sbjct: 131 AAGVPVAAPSANISGRISPTRAAHVAEDIGARVNMILDGGAADAGLE-STIVALK--PRP 187
Query: 205 KILRPGSAKEETI 217
+LRPG+ E +
Sbjct: 188 TMLRPGAVAREDV 200
>gi|451342786|ref|ZP_21911869.1| Sua5/YciO/YrdC/YwlC family protein [Eggerthia catenaformis OT 569 =
DSM 20559]
gi|449338517|gb|EMD17662.1| Sua5/YciO/YrdC/YwlC family protein [Eggerthia catenaformis OT 569 =
DSM 20559]
Length = 200
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 104/181 (57%), Gaps = 9/181 (4%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 91
QA+ G+++A PT+T+YG AC S+A++++ + K R ++ + + + D+ DI ++ T
Sbjct: 15 QAIGNGEIVAFPTETVYGLACKFNDSDALDKLMDAKERDYSKAVTLMLKDIDDIGKYGET 74
Query: 92 DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV-RVIARGLESA 150
D + +PG +T+VL R ++ ++ + L +IG+R+PDS FV +I +
Sbjct: 75 DENIMKIARKFMPGRITLVLKRKKT--VDPIMTNYLPTIGIRIPDSQFVLNLIDK--TGP 130
Query: 151 LALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRP 209
+ +TSANL+G P++ + K+ L R + V G S STVV LT GK +ILR
Sbjct: 131 ILVTSANLSGHPNTTNEKEVLHQLEGRISYVVKGQC--SSALASTVVLLTD-GKIEILRE 187
Query: 210 G 210
G
Sbjct: 188 G 188
>gi|423439976|ref|ZP_17416882.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG4X2-1]
gi|423449864|ref|ZP_17426743.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG5O-1]
gi|423463047|ref|ZP_17439815.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG6O-1]
gi|423532403|ref|ZP_17508821.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HuB2-9]
gi|423542329|ref|ZP_17518719.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HuB4-10]
gi|423548559|ref|ZP_17524917.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HuB5-5]
gi|401127553|gb|EJQ35272.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG5O-1]
gi|401168776|gb|EJQ76031.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HuB4-10]
gi|401174932|gb|EJQ82136.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HuB5-5]
gi|402421139|gb|EJV53404.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG4X2-1]
gi|402422378|gb|EJV54616.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG6O-1]
gi|402464972|gb|EJV96659.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HuB2-9]
Length = 346
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAARLLRENEAVAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ + +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVNEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSEIP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|297170862|gb|ADI21881.1| putative translation factor (SUA5) [uncultured verrucomicrobium
HF0130_25O04]
Length = 325
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
EA + L G+V+A+PT+T+YG AC A +AV +++E+K R T+PL + V D
Sbjct: 3 EASFTVCLDTLLGGEVVALPTETVYGLACLALDEKAVKKVFELKERPPTNPLIVHVLDSR 62
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ A + L PGP+T++L + + + S+ GL+++ VR P R I
Sbjct: 63 QAEQIAHVNSFAKLLCQKFWPGPLTLILPKRQM--IPDSVTAGLDTVAVRSPSHPLFRKI 120
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ E +A SANL SS + ++ F++ E C + DGG G STV+DLT
Sbjct: 121 LQEAEQPIAAPSANLFSMVSSTTPQEVFDSFGEACPPILDGGKCNIG-LESTVLDLTS-D 178
Query: 203 KFKILRPG 210
ILRPG
Sbjct: 179 TPSILRPG 186
>gi|51891213|ref|YP_073904.1| translation factor [Symbiobacterium thermophilum IAM 14863]
gi|51854902|dbj|BAD39060.1| putative translation factor [Symbiobacterium thermophilum IAM
14863]
Length = 349
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 103/193 (53%), Gaps = 10/193 (5%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A L+ G V+A PT+T+YG +A SSEAV RI+ KGR +PL + + D + +
Sbjct: 21 QAAAILRAGDVVAFPTETVYGLGANALSSEAVARIFAAKGRPSDNPLIVHIADTAQLE-- 78
Query: 89 AVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
+ + +P L++ PGP+T+V+ +G + E + GL+++G+R+PD + R
Sbjct: 79 GLVESVPPTAERLMERCWPGPLTLVMRKGPAVPPE--VTAGLDTVGIRMPDHPVALALIR 136
Query: 146 GLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+A SAN +G+PS + + E+L V DGG G STV+D+T
Sbjct: 137 AAGVPIAAPSANASGRPSPTTAEHVLEDLAGSIPAVLDGGETGVG-VESTVLDMTTDPPM 195
Query: 205 KILRPGSAKEETI 217
ILRPG E +
Sbjct: 196 -ILRPGGLPREEL 207
>gi|307270731|ref|ZP_07552022.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX4248]
gi|306513041|gb|EFM81682.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX4248]
Length = 340
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 100/184 (54%), Gaps = 5/184 (2%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT-DHLP 95
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T +
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVATLSEVA 80
Query: 96 HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTS 155
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L S
Sbjct: 81 TKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVGPS 139
Query: 156 ANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGSAK 213
AN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 140 ANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGAIT 198
Query: 214 EETI 217
+E +
Sbjct: 199 KEQL 202
>gi|257081920|ref|ZP_05576281.1| translation factor SUA5 [Enterococcus faecalis E1Sol]
gi|307287619|ref|ZP_07567662.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0109]
gi|422703598|ref|ZP_16761418.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX1302]
gi|256989950|gb|EEU77252.1| translation factor SUA5 [Enterococcus faecalis E1Sol]
gi|306501357|gb|EFM70660.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0109]
gi|315165016|gb|EFU09033.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX1302]
Length = 340
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|255975088|ref|ZP_05425674.1| translation factor SUA5 [Enterococcus faecalis T2]
gi|307285599|ref|ZP_07565738.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0860]
gi|255967960|gb|EET98582.1| translation factor SUA5 [Enterococcus faecalis T2]
gi|306502823|gb|EFM72088.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0860]
Length = 340
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|241895236|ref|ZP_04782532.1| SUA5 family translation factor [Weissella paramesenteroides ATCC
33313]
gi|241871542|gb|EER75293.1| SUA5 family translation factor [Weissella paramesenteroides ATCC
33313]
Length = 342
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 100/184 (54%), Gaps = 4/184 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A +A+K G ++A PT+T+YG DA + +AV ++Y KGR +PL + V D +
Sbjct: 13 DAAARAIKRGSLVAFPTETVYGLGADAYNEKAVGKVYAAKGRPSDNPLIVHVADPEQVAD 72
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
FA+ + L+ + PGP+T++L + L ++ GL+++ VR+PD+ R + R
Sbjct: 73 FAIVNERAQKLMAAYWPGPLTMILPV-KPDVLSMTVTGGLDTVAVRLPDNAATRQLIRES 131
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
L SAN +G+PS K + +L + A + D G G STV+DL+ +
Sbjct: 132 GKPLVGPSANTSGKPSPTLAKHVYHDLHGKIAGILDDGPTKIG-VESTVLDLST-DMPAV 189
Query: 207 LRPG 210
LRPG
Sbjct: 190 LRPG 193
>gi|256961205|ref|ZP_05565376.1| Sua5/YciO/YrdC/YwlC [Enterococcus faecalis Merz96]
gi|293384154|ref|ZP_06630048.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis R712]
gi|293386968|ref|ZP_06631537.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis S613]
gi|312907895|ref|ZP_07766878.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis DAPTO
512]
gi|312978576|ref|ZP_07790314.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis DAPTO
516]
gi|422732210|ref|ZP_16788550.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0645]
gi|256951701|gb|EEU68333.1| Sua5/YciO/YrdC/YwlC [Enterococcus faecalis Merz96]
gi|291078634|gb|EFE15998.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis R712]
gi|291083638|gb|EFE20601.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis S613]
gi|310625986|gb|EFQ09269.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis DAPTO
512]
gi|311288725|gb|EFQ67281.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis DAPTO
516]
gi|315161812|gb|EFU05829.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0645]
Length = 340
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|295113544|emb|CBL32181.1| translation factor SUA5 [Enterococcus sp. 7L76]
Length = 340
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|256616931|ref|ZP_05473777.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ATCC
4200]
gi|307276804|ref|ZP_07557915.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX2134]
gi|256596458|gb|EEU15634.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ATCC
4200]
gi|306506441|gb|EFM75600.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX2134]
Length = 340
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|229545078|ref|ZP_04433803.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX1322]
gi|229309970|gb|EEN75957.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX1322]
Length = 340
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|257090698|ref|ZP_05585059.1| translation factor SUA5 [Enterococcus faecalis CH188]
gi|312905239|ref|ZP_07764359.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0635]
gi|422687784|ref|ZP_16745955.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0630]
gi|256999510|gb|EEU86030.1| translation factor SUA5 [Enterococcus faecalis CH188]
gi|310631476|gb|EFQ14759.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0635]
gi|315579266|gb|EFU91457.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0630]
Length = 340
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|229105918|ref|ZP_04236542.1| hypothetical protein bcere0019_50420 [Bacillus cereus Rock3-28]
gi|228677492|gb|EEL31745.1| hypothetical protein bcere0019_50420 [Bacillus cereus Rock3-28]
Length = 342
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 18 QEAARLLRENEAVAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 76
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ + +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 77 -GIVNEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLNTVGVRMPDHPVALALI 133
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 134 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSEIP 192
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 193 -TILRPGGITKEQL 205
>gi|407717798|ref|YP_006795203.1| translation factor [Leuconostoc carnosum JB16]
gi|407241554|gb|AFT81204.1| putative translation factor [Leuconostoc carnosum JB16]
Length = 340
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T + A LK G+V+A PT+T+YG DA + EAV +++ KGR +PL + V D+
Sbjct: 12 TNQETQRAGDLLKAGEVVAFPTETVYGLGADATNDEAVKKVFIAKGRPSDNPLIMTVADI 71
Query: 83 SDINRFAVTDHLPHGLLDSLLPGPVTVVL--SRGESSNLEKSLNPGLESIGVRVPDSNFV 140
+ ++ F + L+ PG +T++L G+ S L + GL+++ R+PD++
Sbjct: 72 AQLDPFVTISDMAQLLMAHFWPGSLTIILPIKPGKVSML---VTGGLQTVAFRLPDNDVA 128
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
R + R + SAN +G+PS + + ++ + A + D G G STV+D++
Sbjct: 129 RAVIRAAGVPIVGPSANTSGKPSPTTAAHVWHDMQGKIAGIVDDGPTQIG-VESTVIDMS 187
Query: 200 RLGKFKILRPGSAKEETI 217
ILRPG+ ++ +
Sbjct: 188 ATTP-TILRPGAVTQQQL 204
>gi|448450533|ref|ZP_21592352.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum litoreum JCM 13561]
gi|445811647|gb|EMA61650.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum litoreum JCM 13561]
Length = 209
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 98/184 (53%), Gaps = 16/184 (8%)
Query: 20 RPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICV 79
RP A A+ G+++ PT+T+YG DA ++AV R++++KGR ++PL++ V
Sbjct: 9 RPDRSDELRAAAAAVDRGELVVYPTETVYGLGADALDADAVERVFDLKGRDRSNPLSLGV 68
Query: 80 GDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
V D R+A + LPGPVTVV+ RG+ + +L G + +G+RVPD +
Sbjct: 69 ASVDDALRYARPTERAVAFARAFLPGPVTVVVERGDP--VPDALTAGRDRVGIRVPDHDL 126
Query: 140 VRVIARGLESA--LALTSANLTGQPSSVSVKDFENLWER----CACVYDGGVLPSGRAGS 193
R + L+ L TSAN++G + SV D +L +R A V D G P S
Sbjct: 127 ARAL---LDETGPLTATSANVSG---TGSVTDPADLDDRIRGGVAAVIDDGEAPGTE--S 178
Query: 194 TVVD 197
TVVD
Sbjct: 179 TVVD 182
>gi|295100870|emb|CBK98415.1| translation factor SUA5 [Faecalibacterium prausnitzii L2-6]
Length = 341
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 18/200 (9%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
VRPA A A + L+ G+++A+PT+T+YG A DA + EAV++I+ KGR +PL +
Sbjct: 7 VRPADTAGIARAAELLRQGELVALPTETVYGIAADARNGEAVSKIFVAKGRPQDNPLIVH 66
Query: 79 V-------GDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIG 131
V G VS++ A L+ + PGP+T+++ RG E GL+++G
Sbjct: 67 VTGPEMLHGLVSEVPERA------QLLMAAFCPGPLTIIMPRGPEVAAE--CCAGLDTVG 118
Query: 132 VRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGR 190
+R+P R + A A SANL+G+PS + +D F ++ R + DGG G
Sbjct: 119 IRMPSHPVARAVIEASGCAFAAPSANLSGKPSPTNAQDVFTDMDGRLPLILDGGECDWG- 177
Query: 191 AGSTVVDLTRLGKFKILRPG 210
STVV + K + RPG
Sbjct: 178 VESTVVSVVG-EKPTLFRPG 196
>gi|300023494|ref|YP_003756105.1| Sua5/YciO/YrdC/YwlC family protein [Hyphomicrobium denitrificans
ATCC 51888]
gi|299525315|gb|ADJ23784.1| Sua5/YciO/YrdC/YwlC family protein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 315
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 9/201 (4%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
PA EEA L++G ++A PT+T+YG DA + EAV R++ KGR +PL + V
Sbjct: 2 PANAEWIEEAGGLLRSGALVAFPTETVYGLGADATNGEAVARVFAAKGRPSFNPLIVHVL 61
Query: 81 DVSD---INRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
+ I F+ T L ++ PGP+T+V+ R E++++ + ++ GL ++ +R PD
Sbjct: 62 GLEQAVIIGSFSATARR---LTEAFWPGPLTLVVPRIETTDVSELVSAGLPTVALRSPDH 118
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVV 196
R + + + +A SAN +G S+ + +L +R A + D G P G STVV
Sbjct: 119 PVARQLLKAAQRPIAAPSANRSGHVSATRAEHVAADLGDRAAVILDAGQTPRGLE-STVV 177
Query: 197 DLTRLGKFKILRPGSAKEETI 217
L +LRPG+ + I
Sbjct: 178 SLAGAAPV-LLRPGAISADAI 197
>gi|229076540|ref|ZP_04209500.1| hypothetical protein bcere0024_49790 [Bacillus cereus Rock4-18]
gi|229099758|ref|ZP_04230683.1| hypothetical protein bcere0020_49760 [Bacillus cereus Rock3-29]
gi|407707798|ref|YP_006831383.1| cytoplasmic protein [Bacillus thuringiensis MC28]
gi|228683647|gb|EEL37600.1| hypothetical protein bcere0020_49760 [Bacillus cereus Rock3-29]
gi|228706573|gb|EEL58786.1| hypothetical protein bcere0024_49790 [Bacillus cereus Rock4-18]
gi|407385483|gb|AFU15984.1| sua5/yciO/yrdC/ywlC family protein [Bacillus thuringiensis MC28]
Length = 342
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 18 QEAARLLRENEAVAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 76
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ + +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 77 -GIVNEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLNTVGVRMPDHPVALALI 133
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 134 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSEIP 192
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 193 -TILRPGGITKEQL 205
>gi|417644414|ref|ZP_12294404.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus warneri VCU121]
gi|445059138|ref|YP_007384542.1| hypothetical protein A284_03885 [Staphylococcus warneri SG1]
gi|330684783|gb|EGG96476.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU121]
gi|443425195|gb|AGC90098.1| hypothetical protein A284_03885 [Staphylococcus warneri SG1]
Length = 347
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 102/178 (57%), Gaps = 5/178 (2%)
Query: 36 TGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA-VTDHL 94
G ++A+PT+T+YG DA + EAV++IYE KGR +PL + + D+S +N F +
Sbjct: 30 NGGLVALPTETVYGLGADATNQEAVSQIYEAKGRPSDNPLIVHIHDMSQMNDFIDKVEPR 89
Query: 95 PHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALT 154
L+++ PGP++ +L +S L + GL SI VR+P R + + ++ +A
Sbjct: 90 VQQLMETFWPGPISFILPL-KSGYLCPKVTGGLNSIAVRMPSHPIGRGVLQQIDKPIAAP 148
Query: 155 SANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGS 211
SAN++G+PS + + +++L R + +G G STV+D T+ F+I RPGS
Sbjct: 149 SANISGRPSPTTFEHVYQDLNGRIDGIINGDQSEEGLE-STVLDCTQY-PFRIARPGS 204
>gi|229118821|ref|ZP_04248170.1| hypothetical protein bcere0017_50860 [Bacillus cereus Rock1-3]
gi|228664622|gb|EEL20115.1| hypothetical protein bcere0017_50860 [Bacillus cereus Rock1-3]
Length = 342
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 107/194 (55%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A + EA+ +I+E KGR +PL + +G S ++
Sbjct: 18 QEAARLLRENEAVAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 76
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ + +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 77 -GIVNEIPPVAEKLMEHFWPGPLTIILPRKEG--ISEKVTAGLNTVGVRMPDHPVALALI 133
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 134 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSEIP 192
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 193 -TILRPGGITKEQL 205
>gi|404493183|ref|YP_006717289.1| tRNA (N6-threonylcarbamyl-A37) modification ATPase [Pelobacter
carbinolicus DSM 2380]
gi|77545247|gb|ABA88809.1| tRNA (N6-threonylcarbamyl-A37) modification ATPase [Pelobacter
carbinolicus DSM 2380]
Length = 204
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 97/187 (51%), Gaps = 14/187 (7%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
++ +K G ++A PTDT+YG CD + + + RIY+IK R H P + D+SD+ +A
Sbjct: 18 VVECIKQGGIVAYPTDTIYGLGCDIFNRKGIKRIYQIKERVHRKPFSFICADLSDVANYA 77
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ ++ LPGP T VL + + L +++G+R+P + I R L
Sbjct: 78 QVSNFAFKIMKRYLPGPYTFVLE--ATRVVPDLLVTKQKTVGIRIPSNPISLAIVRELGH 135
Query: 150 ALALTSANLTGQ-----PSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
L TSANL+G+ PS + E L ++ V DGG++ G A STV+ L
Sbjct: 136 PLVTTSANLSGEEPCCDPSLIE----EELGKQINMVVDGGII-KGEA-STVISLID-DNI 188
Query: 205 KILRPGS 211
++LR G+
Sbjct: 189 EVLRQGA 195
>gi|226315059|ref|YP_002774955.1| hypothetical protein BBR47_54740 [Brevibacillus brevis NBRC 100599]
gi|226098009|dbj|BAH46451.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 359
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 105/197 (53%), Gaps = 10/197 (5%)
Query: 25 AHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSD 84
A +A + L+ G V+A PT+T+YG +A S+EAV +I+ KGR +PL + +G
Sbjct: 23 AQIVDAARFLREGAVVAFPTETVYGLGANALSNEAVEKIFTAKGRPSDNPLIVHIGAWDQ 82
Query: 85 INRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
++ V +P L+++ PGP+TV+L + + + + GL+S+GVR+PD
Sbjct: 83 LS--TVASEVPEKGKKLMEAFWPGPLTVILPK--TDQVASLVTAGLDSVGVRMPDHPIAL 138
Query: 142 VIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
+ + +A SAN +G+PS + +L R A V DGG G STV+D+T+
Sbjct: 139 ALIKEAGVPIAAPSANRSGRPSPTTAAHVLADLDGRVAGVVDGGATGVG-VESTVIDVTQ 197
Query: 201 LGKFKILRPGSAKEETI 217
ILRPG E +
Sbjct: 198 DPPM-ILRPGGITREQM 213
>gi|254471762|ref|ZP_05085163.1| Sua5/YciO/YrdC/YwlC family protein [Pseudovibrio sp. JE062]
gi|211958964|gb|EEA94163.1| Sua5/YciO/YrdC/YwlC family protein [Pseudovibrio sp. JE062]
Length = 329
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 104/195 (53%), Gaps = 4/195 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++ AL GK++A+PT+T+YG A DA + +A IYE KGR +PL + +
Sbjct: 20 QDICDALSDGKLVAIPTETVYGLAADATNGKACAGIYEAKGRPSFNPLISHIDSLEAAQT 79
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A D L ++ PGP+T+VL + +S + GLE+I +RVP S +R + +
Sbjct: 80 HAFFDDRALKLAEAFWPGPLTLVLPKLPTSPVSDLAVAGLETIALRVPRSAVMRALCKRT 139
Query: 148 ESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SANL+G+ S + +D N L + + + D G P G ST+V L + +
Sbjct: 140 GLPLAAPSANLSGRISGTTAEDVINDLKDHLSYIIDSGATPVG-VESTIVSLVG-DRPTL 197
Query: 207 LRPGS-AKEETIAIL 220
LRPG A+E A+L
Sbjct: 198 LRPGGLARENVEAVL 212
>gi|418413306|ref|ZP_12986548.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
BVS058A4]
gi|410879193|gb|EKS27044.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
BVS058A4]
Length = 347
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 5/202 (2%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H +E Q G ++A+PT+T+YG +A + EAV IY KGR +PL + + + +
Sbjct: 20 HIDEIKQTFLDGGLVAIPTETVYGLGANARNEEAVENIYVAKGRPSDNPLIVHIHSIEQL 79
Query: 86 NRFA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ F D L+D PGP++ +L + L + GLESI VR+P R +
Sbjct: 80 DDFVEYIDDKVKVLMDEFWPGPISFILPLKQGY-LCSKVTGGLESIAVRMPSHKIGRALL 138
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ ++ +A SAN++G+PS + + +L + + +G G STV+D T+
Sbjct: 139 QIVDEPIAAPSANISGRPSPTTFEHVNRDLNGKVNGIVNGDQCEEGLE-STVIDCTQF-P 196
Query: 204 FKILRPGSAKEETIAILEKHSL 225
F+I RPGS ++ I HS+
Sbjct: 197 FRIARPGSITQDMIETKLPHSI 218
>gi|295707225|ref|YP_003600300.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus megaterium DSM 319]
gi|294804884|gb|ADF41950.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus megaterium DSM 319]
Length = 346
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 103/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EEA L+ +V+A PT+T+YG DA S +AV++I+ KGR +PL + +GD ++
Sbjct: 22 EEAADLLRNHEVVAFPTETVYGLGGDATSDKAVDKIFAAKGRPSDNPLIVHIGDKEQLHT 81
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
F + +P ++D+ PGP+TV+L + + + + GL SI VR+P +
Sbjct: 82 F--VESIPSKAEKVIDAFWPGPLTVILPKKD--RVSDKVTAGLNSIAVRMPSHPVALALL 137
Query: 145 RGLESALALTSANLTGQPSSVSVKDFENLWE-RCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ + +A SANL+G+PS N E R + V DGG G STV+D T
Sbjct: 138 KKVALPIAAPSANLSGKPSPTLAHHVMNDLEGRISGVVDGGATGVG-VESTVLDCTEEIP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG ++ +
Sbjct: 197 I-ILRPGGITQKEL 209
>gi|282600841|ref|ZP_05979863.2| Sua5/YciO/YrdC/YwlC family protein [Subdoligranulum variabile DSM
15176]
gi|282571097|gb|EFB76632.1| Sua5/YciO/YrdC/YwlC family protein [Subdoligranulum variabile DSM
15176]
Length = 339
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 113/201 (56%), Gaps = 21/201 (10%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICV-------GDV 82
A + L+ G+++A+PT+T+YG A DA + +AV +I+E KGR +PL + + G V
Sbjct: 16 AAELLRQGELVALPTETVYGIAADARNGDAVRKIFEAKGRPQDNPLIVHICGMDMLQGIV 75
Query: 83 SDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
S++ A+ L + PGP+T+V+ RG + + + GL+++GVR+P V+
Sbjct: 76 SEVPERALK------LAAAFWPGPLTMVMPRG--AEVSEVTCAGLDTVGVRMPSHPVVQA 127
Query: 143 IARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ + A A SANL+G+PS + +D ++ R + DGG G STVV +T
Sbjct: 128 VIKASGVAFAAPSANLSGKPSPTNAQDTLADMHGRLPLILDGGESAVG-VESTVVSVT-- 184
Query: 202 GKFKI-LRPGS-AKEETIAIL 220
G+ I LRPG KE+ A+L
Sbjct: 185 GEHPILLRPGYITKEQMEAVL 205
>gi|423613465|ref|ZP_17589325.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD107]
gi|401241755|gb|EJR48135.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD107]
Length = 346
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + LK + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 KEAARLLKENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVREIPPVAETLMEHFWPGPLTIILPRKE--GISEKVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSTVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|160945366|ref|ZP_02092592.1| hypothetical protein FAEPRAM212_02888 [Faecalibacterium prausnitzii
M21/2]
gi|158443097|gb|EDP20102.1| Sua5/YciO/YrdC/YwlC family protein [Faecalibacterium prausnitzii
M21/2]
Length = 344
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 105/200 (52%), Gaps = 18/200 (9%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
V PA EA EA Q L+ G+++A+PT+T+YG A DA + AV I+ KGR +PL +
Sbjct: 10 VLPADEAGVAEAAQLLRQGQLVALPTETVYGIAADARNGAAVRDIFVAKGRPQDNPLIVH 69
Query: 79 V-------GDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIG 131
V G VS++ A L+ + PGP+T+++ RG + GL+++G
Sbjct: 70 VTGPEMLPGLVSEVPERA------QLLMAAFCPGPLTIIMPRG--PEVADECCAGLDTVG 121
Query: 132 VRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGR 190
+R+P R + + A A SANL+G+PS + +D F ++ R + DGG G
Sbjct: 122 IRMPSHPVARAVIQQSGCAFAAPSANLSGKPSPTNAQDVFTDMDGRLPLILDGGECDVG- 180
Query: 191 AGSTVVDLTRLGKFKILRPG 210
STVV + K + RPG
Sbjct: 181 VESTVVSVVG-DKPTLFRPG 199
>gi|261403807|ref|YP_003248031.1| Sua5/YciO/YrdC/YwlC family protein [Methanocaldococcus vulcanius
M7]
gi|261370800|gb|ACX73549.1| Sua5/YciO/YrdC/YwlC family protein [Methanocaldococcus vulcanius
M7]
Length = 211
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 13/138 (9%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
GK+I TDTLYG + +A + AV +IY+IK R + PL+IC+ D+++I ++A + L
Sbjct: 30 GKIIICGTDTLYGISANALNENAVKKIYQIKKRDYNKPLSICLKDINEIKKYAYVNELAE 89
Query: 97 GLLDSLLPGPVTVVLSRGESSNLEKSLNPGL---ESIGVRVPDSNFVRVIARGLESALAL 153
++ LPGP+T++L + SN+ P L E IG+R+PD +R +A L
Sbjct: 90 KIIKHFLPGPITIILKK--KSNI-----PNLVSKEYIGIRIPDEEIIRELAI---VPLTT 139
Query: 154 TSANLTGQPSSVSVKDFE 171
TSAN++G V++ +
Sbjct: 140 TSANISGGKDPTCVEEID 157
>gi|420212552|ref|ZP_14717901.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM001]
gi|394279673|gb|EJE23976.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM001]
Length = 347
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 5/202 (2%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H +E Q G ++A+PT+T+YG +A + EAV IY KGR +PL + + + +
Sbjct: 20 HIDEIKQTFLDGGLVAIPTETVYGLGANARNEEAVENIYVAKGRPSDNPLIVHIHSIEQL 79
Query: 86 NRFA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ F D L+D PGP++ +L + L + GLESI VR+P R +
Sbjct: 80 DDFVEYIDDKVKVLMDEFWPGPISFILPLKQGY-LCSKVTGGLESIAVRMPSHKIGRALL 138
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ ++ +A SAN++G+PS + + +L + + +G G STV+D T+
Sbjct: 139 QIVDEPIAAPSANISGRPSPTTFEHVNRDLNGKVNGIVNGDQCEEGLE-STVIDCTQF-P 196
Query: 204 FKILRPGSAKEETIAILEKHSL 225
F+I RPGS ++ I HS+
Sbjct: 197 FRIARPGSITQDIIETKLPHSI 218
>gi|384136802|ref|YP_005519516.1| Sua5/YciO/YrdC/YwlC family protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339290887|gb|AEJ44997.1| Sua5/YciO/YrdC/YwlC family protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 360
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG------D 81
+E Q+L+ G ++A PT+T+YG +A +AV RI+ K R +PL + + D
Sbjct: 20 KEPAQSLRRGGLVAFPTETVYGLGANALQEDAVRRIFAAKERPRDNPLIVHIAEDHQLRD 79
Query: 82 VSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
V D N+ D + L+ + PGP+T++L G + L S++PG +GVR+PD R
Sbjct: 80 VIDENQPLHEDAV--RLMRAFWPGPLTLLLPAG--TRLAPSVHPGQPLVGVRMPDHPVAR 135
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
+ +A SAN +G+PS + D +L ER + DGG P G STV+ L
Sbjct: 136 ALIAEAGVPVAAPSANRSGRPSPTTADDVAADLGERMDWLVDGGPCPIG-VESTVL-LLE 193
Query: 201 LGKFKILRPGSAKEETIA 218
+ILRPG +E IA
Sbjct: 194 PDCARILRPGGVTQEMIA 211
>gi|313113833|ref|ZP_07799400.1| Sua5/YciO/YrdC/YwlC family protein [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310623860|gb|EFQ07248.1| Sua5/YciO/YrdC/YwlC family protein [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 358
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 111/216 (51%), Gaps = 18/216 (8%)
Query: 3 FSLENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNR 62
+E + +E K ++ + E E+A L+ G+++A+PT+T+YG A DA + EAV +
Sbjct: 8 LQIERTMIRMEMKTEILPASDEKSIEKAAALLQNGELVALPTETVYGIAADARNGEAVKK 67
Query: 63 IYEIKGRKHTSPLAICV-------GDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGE 115
I+ KGR +PL + V G VS++ A L+ + PGP+T+++ RG
Sbjct: 68 IFVAKGRPQDNPLIVHVTGPEMLPGLVSEVPERA------QLLMAAFCPGPLTIIMPRGP 121
Query: 116 SSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLW 174
E GL+++G+R+P R + A A SANL+G+PS + +D F ++
Sbjct: 122 EVAAE--CCAGLDTVGIRMPSHPVARAVIEKSGCAFAAPSANLSGKPSPTNAQDVFTDMD 179
Query: 175 ERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
R + DGG G STVV + K + RPG
Sbjct: 180 GRLPLILDGGECDVG-VESTVVSVVG-EKPTLFRPG 213
>gi|73540259|ref|YP_294779.1| translation factor SUA5 [Ralstonia eutropha JMP134]
gi|72117672|gb|AAZ59935.1| translation factor SUA5 [Ralstonia eutropha JMP134]
Length = 328
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 112/204 (54%), Gaps = 16/204 (7%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
+ R T A +EA++ L+ G+++A PT+T+YG DA S EAV RI+ +KGR P+ +
Sbjct: 1 MSRMPTAAELDEAVRLLEAGQLVAFPTETVYGLGADAESPEAVARIFALKGRPSNHPVIV 60
Query: 78 CVGDVSDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRV 134
V D +DI + D +P L+++ PGP+T++L R +S++ ++ G +SIG+R
Sbjct: 61 HVVDGADIGYW--VDEVPEAATKLIEAFWPGPLTLILKR--ASHIHAAVAGGQDSIGLRC 116
Query: 135 PDSNFVRVI----ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGR 190
P + + RG +A SAN GQ S + + + + V +G + G
Sbjct: 117 PSHPVAQALLSRFKRG-RGGIAAPSANKFGQVSPTTAQHVRDEFGDAVYVLEGDGVEVG- 174
Query: 191 AGSTVVDLTRLGKF---KILRPGS 211
ST+VDL+RL + +LRPG+
Sbjct: 175 IESTIVDLSRLDQGIGPVLLRPGA 198
>gi|323142098|ref|ZP_08076946.1| Sua5/YciO/YrdC/YwlC family protein [Phascolarctobacterium
succinatutens YIT 12067]
gi|322413485|gb|EFY04356.1| Sua5/YciO/YrdC/YwlC family protein [Phascolarctobacterium
succinatutens YIT 12067]
Length = 368
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 106/192 (55%), Gaps = 6/192 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA ++ G+V++ PT+T+YG D + EAV +I+ KGR + +PL + + DI +
Sbjct: 19 QEAAALIRAGEVVSFPTETVYGLGADGLNPEAVAKIFAAKGRPNDNPLILHIAKKEDIAQ 78
Query: 88 FAVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ L++ PGP+T+++++ S+ + +++ GLE++ VR P + F + R
Sbjct: 79 LTTCLNANAKKLMEHFWPGPLTLIVNK--SAIVPDAVSAGLETVAVRFPSNKFAQDFIRA 136
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN++G+PS + +D E++ + A + DGG G STVVD T
Sbjct: 137 CGCPIAAPSANISGRPSPTNAQDVLEDMQGKIAGMLDGGNCGIGLE-STVVDTTS-AVPT 194
Query: 206 ILRPGSAKEETI 217
ILRPG E +
Sbjct: 195 ILRPGGITYEML 206
>gi|420210296|ref|ZP_14715725.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM003]
gi|394276530|gb|EJE20868.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM003]
Length = 347
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 5/202 (2%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H +E Q G ++A+PT+T+YG +A + EAV IY KGR +PL + + + +
Sbjct: 20 HIDEIKQTFLDGGLVAIPTETVYGLGANARNEEAVENIYVAKGRPSDNPLIVHIHSIEQL 79
Query: 86 NRFA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ F D L+D PGP++ +L + L + GLESI VR+P R +
Sbjct: 80 DDFVEYIDDKVKVLMDEFWPGPISFILPLKQGY-LCSKVTGGLESIAVRMPSHKIGRALL 138
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ ++ +A SAN++G+PS + + +L + + +G G STV+D T+
Sbjct: 139 QIVDEPIAAPSANISGRPSPTTFEHVNRDLNGKVNGIVNGDQCEEGLE-STVIDCTQF-P 196
Query: 204 FKILRPGSAKEETIAILEKHSL 225
F+I RPGS ++ I HS+
Sbjct: 197 FRIARPGSITQDMIETKLPHSI 218
>gi|27468631|ref|NP_765268.1| hypothetical protein SE1713 [Staphylococcus epidermidis ATCC 12228]
gi|57867582|ref|YP_189286.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
RP62A]
gi|251812173|ref|ZP_04826646.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876476|ref|ZP_06285342.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
SK135]
gi|293366080|ref|ZP_06612768.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417646898|ref|ZP_12296750.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU144]
gi|417656859|ref|ZP_12306537.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU028]
gi|417660223|ref|ZP_12309812.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU045]
gi|417908984|ref|ZP_12552734.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU037]
gi|417912445|ref|ZP_12556137.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU105]
gi|417913872|ref|ZP_12557533.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU109]
gi|418604100|ref|ZP_13167467.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU041]
gi|418607555|ref|ZP_13170785.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU057]
gi|418609419|ref|ZP_13172572.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU065]
gi|418613136|ref|ZP_13176152.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU117]
gi|418617910|ref|ZP_13180796.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU120]
gi|418622321|ref|ZP_13185073.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU123]
gi|418623902|ref|ZP_13186596.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU125]
gi|418627635|ref|ZP_13190207.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU126]
gi|418629954|ref|ZP_13192447.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU127]
gi|418663721|ref|ZP_13225230.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU081]
gi|419768467|ref|ZP_14294589.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus aureus subsp.
aureus IS-250]
gi|419771581|ref|ZP_14297632.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus aureus subsp.
aureus IS-K]
gi|420166559|ref|ZP_14673243.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM088]
gi|420171717|ref|ZP_14678252.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM070]
gi|420173641|ref|ZP_14680132.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM067]
gi|420182087|ref|ZP_14688229.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM049]
gi|420186948|ref|ZP_14692972.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM039]
gi|420195933|ref|ZP_14701717.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM021]
gi|420198054|ref|ZP_14703772.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM020]
gi|420202829|ref|ZP_14708417.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM018]
gi|420207937|ref|ZP_14713422.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM008]
gi|420215228|ref|ZP_14720499.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH05005]
gi|420216733|ref|ZP_14721931.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH05001]
gi|420220975|ref|ZP_14725930.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH04008]
gi|420223652|ref|ZP_14728547.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH08001]
gi|420226175|ref|ZP_14730997.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH06004]
gi|420228589|ref|ZP_14733338.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH05003]
gi|420230975|ref|ZP_14735652.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH04003]
gi|420233581|ref|ZP_14738189.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH051668]
gi|420236011|ref|ZP_14740542.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH051475]
gi|421608824|ref|ZP_16050036.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
AU12-03]
gi|27316178|gb|AAO05312.1|AE016749_258 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57638240|gb|AAW55028.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
RP62A]
gi|251804270|gb|EES56927.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|281294728|gb|EFA87256.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
SK135]
gi|291319803|gb|EFE60161.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329726158|gb|EGG62630.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU144]
gi|329734140|gb|EGG70458.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU045]
gi|329735637|gb|EGG71920.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU028]
gi|341650657|gb|EGS74473.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU105]
gi|341654330|gb|EGS78077.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU109]
gi|341654624|gb|EGS78363.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU037]
gi|374404409|gb|EHQ75383.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU057]
gi|374405896|gb|EHQ76807.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU041]
gi|374407821|gb|EHQ78669.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU065]
gi|374411259|gb|EHQ81976.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU081]
gi|374816572|gb|EHR80773.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU117]
gi|374817171|gb|EHR81357.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU120]
gi|374826915|gb|EHR90790.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU123]
gi|374829081|gb|EHR92895.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU126]
gi|374829146|gb|EHR92959.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU125]
gi|374832473|gb|EHR96183.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU127]
gi|383359831|gb|EID37241.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus aureus subsp.
aureus IS-250]
gi|383361079|gb|EID38461.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus aureus subsp.
aureus IS-K]
gi|394233566|gb|EJD79167.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM088]
gi|394236832|gb|EJD82335.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM070]
gi|394239678|gb|EJD85113.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM067]
gi|394250551|gb|EJD95733.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM049]
gi|394256914|gb|EJE01838.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM039]
gi|394262534|gb|EJE07296.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM021]
gi|394264985|gb|EJE09651.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM020]
gi|394269008|gb|EJE13553.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM018]
gi|394274957|gb|EJE19352.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM008]
gi|394282508|gb|EJE26701.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH05005]
gi|394285425|gb|EJE29504.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH04008]
gi|394287150|gb|EJE31117.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH08001]
gi|394291412|gb|EJE35224.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH05001]
gi|394292661|gb|EJE36401.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH06004]
gi|394294623|gb|EJE38294.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH05003]
gi|394295858|gb|EJE39494.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH04003]
gi|394299863|gb|EJE43391.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH051668]
gi|394301647|gb|EJE45102.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIH051475]
gi|406655477|gb|EKC81904.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
AU12-03]
Length = 347
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 5/202 (2%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H +E Q G ++A+PT+T+YG +A + EAV IY KGR +PL + + + +
Sbjct: 20 HIDEIKQTFLDGGLVAIPTETVYGLGANARNEEAVENIYVAKGRPSDNPLIVHIHSIEQL 79
Query: 86 NRFA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ F D L+D PGP++ +L + L + GLESI VR+P R +
Sbjct: 80 DDFVEYIDDKVKVLMDEFWPGPISFILPLKQGY-LCSKVTGGLESIAVRMPSHKIGRALL 138
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ ++ +A SAN++G+PS + + +L + + +G G STV+D T+
Sbjct: 139 QIVDEPIAAPSANISGRPSPTTFEHVNRDLNGKVNGIVNGDQCEEGLE-STVIDCTQF-P 196
Query: 204 FKILRPGSAKEETIAILEKHSL 225
F+I RPGS ++ I HS+
Sbjct: 197 FRIARPGSITQDMIETKLPHSI 218
>gi|196249769|ref|ZP_03148465.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus sp. G11MC16]
gi|196210645|gb|EDY05408.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus sp. G11MC16]
Length = 345
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 11/207 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+TG+VIA PT+T+YG DA ++ AV +I+ KGR +PL + V + +
Sbjct: 22 QEAAEWLRTGEVIAFPTETVYGLGADAANTTAVEKIFAAKGRPSDNPLIVHVASRAQVES 81
Query: 88 FAVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A + + L++ PGP+T+VL + + + E+ + GL ++ VR+PD +
Sbjct: 82 IAASIPPVAKTLMERFWPGPLTLVLPKRDGAVSER-VTAGLSTVAVRMPDHPLALALIEA 140
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGKF 204
ALA SAN +G+PS + +L R A V DGG P+G STV+D + G+
Sbjct: 141 SGLALAAPSANRSGRPSPTTAAHVLADLNGRIAGVIDGG--PTGVGVESTVLDCS--GEV 196
Query: 205 -KILRPGSAKEETIAILEKHSLVEEPA 230
ILRPG +E A+ E VEE A
Sbjct: 197 PTILRPGGVTKE--ALSEVIGRVEEAA 221
>gi|146296540|ref|YP_001180311.1| Sua5/YciO/YrdC/YwlC family protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410116|gb|ABP67120.1| Sua5/YciO/YrdC/YwlC family protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 348
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 104/185 (56%), Gaps = 6/185 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A Q LK G ++A PT+T+YG +A EAV++I+ KGR +PL + + ++
Sbjct: 18 KAAQILKEGGLVAFPTETVYGLGANALLKEAVDKIFVAKGRPQDNPLIVHISSKKMLDMC 77
Query: 89 A-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A VTD + L++ PGP+T+VL + E + ++ GL ++G+R+P++ +
Sbjct: 78 AKVTDERVYKLIEKFWPGPLTIVLPKKEC--IPDNVTAGLNTVGIRMPNNKIALELIELA 135
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+A SAN++G+PS + E+L+ + + DGG G STV+DL+ K I
Sbjct: 136 GVPVAAPSANVSGKPSPTEAQHVIEDLFGKVDVIIDGGKCSFGLE-STVIDLSS-SKPYI 193
Query: 207 LRPGS 211
LRPG+
Sbjct: 194 LRPGA 198
>gi|451948586|ref|YP_007469181.1| translation factor SUA5 [Desulfocapsa sulfexigens DSM 10523]
gi|451907934|gb|AGF79528.1| translation factor SUA5 [Desulfocapsa sulfexigens DSM 10523]
Length = 210
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 109/201 (54%), Gaps = 10/201 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
TE E A+Q LK G ++A PT+T YG A D + +A+ +Y +K R+ +++ + DV
Sbjct: 4 TEHDYEYALQCLKQGGIVAYPTETFYGLAVDPENEQAITDLYALKKREEQKAISLIIPDV 63
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
+ + ++ +P+ GL++S PGP+T++ S ++ L G ++ +RV
Sbjct: 64 THL--LSLVSLVPNGYKGLMNSFWPGPLTLIFS--ARKHIPSILTGGTNTLALRVSSHPV 119
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKDFENLW-ERCACVYDGGVLPSGRAGSTVVDL 198
+A AL TSAN++G+ + + +D ++ +R +CV DGG P G+ GST+V
Sbjct: 120 AMKLAESWGGALTTTSANISGEEALATAEDVHTVFGDRVSCVLDGGPTPGGQ-GSTIVHC 178
Query: 199 T-RLGKFKILRPGSAKEETIA 218
T + +I+R G E ++
Sbjct: 179 TDDTMECRIIREGVISHEQLS 199
>gi|159905153|ref|YP_001548815.1| Sua5/YciO/YrdC/YwlC family protein [Methanococcus maripaludis C6]
gi|159886646|gb|ABX01583.1| Sua5/YciO/YrdC/YwlC family protein [Methanococcus maripaludis C6]
Length = 206
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 106/199 (53%), Gaps = 18/199 (9%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E E A + + GKVI TDTLYG + +A A+ +IY IK R P++I +G+
Sbjct: 15 EKEIETAKKMILNGKVILCGTDTLYGLSTNALDKNAIEKIYSIKERDPNKPISISLGEKK 74
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP---GLESIGVRVPDSNFV 140
I + D + +++ +PGP+TV+L + K + P G + +GVR+PD++ +
Sbjct: 75 QIENYVYVDSIAKKIIEKFMPGPITVILKK-------KDIIPDILGKDDVGVRIPDNDVI 127
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSG-RAGSTVVDL 198
R IA L TSAN++G+ + S+++ + + E+ + + G PS + ST+V +
Sbjct: 128 RKIAI---VPLTTTSANISGKTAPSSLEEVDTVIKEKVDLIINTG--PSKYKVQSTIVKV 182
Query: 199 TRLGKFKILRPGSAKEETI 217
GK +++R G E I
Sbjct: 183 IG-GKIELIREGKIPFEEI 200
>gi|347549844|ref|YP_004856172.1| hypothetical protein LIV_2451 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346982915|emb|CBW86949.1| Putative yeast translation initiation protein [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 345
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 5/192 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A + L+ G+ +A PT+T+YG DA + A+ +IY KGR +PL + + + ++
Sbjct: 19 EQAAELLRNGECVAFPTETVYGLGADATNHAAIQKIYAAKGRPSDNPLIVHIASRNQMDA 78
Query: 88 F-AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
F A L+++ PGP+TV+L + S L +++ GL ++GVR+P++ + +
Sbjct: 79 FVASYPQKAMQLMENFWPGPLTVILPLKKDS-LASNVSAGLSTVGVRMPENPVSLALIKE 137
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN +G+PS S E+L + A + DGG G STV+D +R
Sbjct: 138 AAIPVAAPSANRSGKPSPTSASHVIEDLDGKVAGIIDGGETGVG-VESTVIDCSREIPV- 195
Query: 206 ILRPGSAKEETI 217
ILRPG +E I
Sbjct: 196 ILRPGGITKEQI 207
>gi|294501877|ref|YP_003565577.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus megaterium QM B1551]
gi|294351814|gb|ADE72143.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus megaterium QM B1551]
Length = 346
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 103/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EEA L+ +V+A PT+T+YG DA S +AV++I+ KGR +PL + +GD ++
Sbjct: 22 EEAADLLRNHEVVAFPTETVYGLGGDATSDKAVDKIFAAKGRPSDNPLIVHIGDKEQLHT 81
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
F + +P ++D+ PGP+TV+L + + + + GL SI VR+P +
Sbjct: 82 F--VESIPSKAEKVIDAFWPGPLTVILPKKD--RVSDKVTAGLNSIAVRMPSHPVALALL 137
Query: 145 RGLESALALTSANLTGQPSSVSVKDFENLWE-RCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ + +A SANL+G+PS N E R + V DGG G STV+D T
Sbjct: 138 KKVALPIAAPSANLSGKPSPTLAHHVMNDLEGRISGVVDGGATGVG-VESTVLDCTEEIP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG ++ +
Sbjct: 197 I-ILRPGGITQKEL 209
>gi|149183887|ref|ZP_01862278.1| SUA5 protein [Bacillus sp. SG-1]
gi|148848406|gb|EDL62665.1| SUA5 protein [Bacillus sp. SG-1]
Length = 348
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 9/193 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA Q LK +V+A PT+T+YG +A S EAV++I+ KGR +PL + + + +N
Sbjct: 23 EASQFLKDNEVVAFPTETVYGLGANAKSDEAVDKIFAAKGRPSDNPLIVHISNSEQLNEL 82
Query: 89 AVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
+ +P +++ PGP+T++ + E L + + GL+S+G+R+PD +
Sbjct: 83 --VEEIPEAAQIMMEHFWPGPLTIIFKKKEGV-LSEKVTAGLDSVGIRMPDHPVALALIE 139
Query: 146 GLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+A SAN++G+PS + ++L R + V +GG G STVVD T
Sbjct: 140 AANLPIAAPSANVSGRPSPTTAHHVTQDLDGRISGVINGGETGVG-VESTVVDCTSEIPV 198
Query: 205 KILRPGSAKEETI 217
ILRPG +E +
Sbjct: 199 -ILRPGGVTKEQL 210
>gi|114767661|ref|ZP_01446371.1| Sua5/YciO/YrdC family protein [Pelagibaca bermudensis HTCC2601]
gi|114540329|gb|EAU43423.1| Sua5/YciO/YrdC family protein [Roseovarius sp. HTCC2601]
Length = 318
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 94/178 (52%), Gaps = 4/178 (2%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
L++G ++A PT+T+YG DAC+ AV RIYE KGR +PL + + D+ + V
Sbjct: 23 LRSGGLLAFPTETVYGLGGDACNDRAVARIYEAKGRPSFNPLIVHLADLDAVKALVVWSD 82
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L + PGP+T+VL ES+ + K + GL+S+ VR+P + R + +A
Sbjct: 83 LAEAAAAAFWPGPLTMVLPLRESAKVSKLVTAGLDSLAVRMPANPVARALLAEFGGPVAA 142
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
SAN +G+ S + + L R V DGG G ST++ L GK +LRPG
Sbjct: 143 PSANRSGRISPTRAEHVLDTLDGRIEGVLDGGRCDVGLE-STILGLA--GKPTLLRPG 197
>gi|302383673|ref|YP_003819496.1| Sua5/YciO/YrdC/YwlC family protein [Brevundimonas subvibrioides
ATCC 15264]
gi|302194301|gb|ADL01873.1| Sua5/YciO/YrdC/YwlC family protein [Brevundimonas subvibrioides
ATCC 15264]
Length = 325
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 94/194 (48%), Gaps = 3/194 (1%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A+ AL+ G ++ +PT+T+YG A DA +EAV RI+E KGR +PL V D
Sbjct: 26 DAAVAALRAGDLVILPTETVYGLAADAGRAEAVARIFEAKGRPRFNPLIAHVADTGAAEA 85
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
AV D L + PGP+T+V + GL+S+ VRVP R + +
Sbjct: 86 IAVFDDAARALAAAFWPGPLTIVAPVRPGDRVCDLARAGLDSVAVRVPGHPVARALLQAF 145
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ SAN +G+PS + D E A DGG G STVV + G+ +
Sbjct: 146 GGPVVAPSANRSGRPSPTTFADAMEETGSSAAAALDGGPCDVG-VESTVVSVLD-GRVTL 203
Query: 207 LRPGSAKEETIAIL 220
LRPG+ + I L
Sbjct: 204 LRPGAVTRDQIEAL 217
>gi|330719387|ref|ZP_08313987.1| putative translation factor [Leuconostoc fallax KCTC 3537]
Length = 337
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 109/193 (56%), Gaps = 9/193 (4%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
L G+V+A PT+T+YG A AV +++ KGR +PL + V D + + +FAV +
Sbjct: 20 LSQGEVVAFPTETVYGLGAVATDEVAVRKVFTAKGRPSDNPLIVTVADKAMVQQFAVEND 79
Query: 94 LPHGLLDSLLPGPVTVVLS-RGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
+ L+ + PG +T++L R ++ ++ ++ GL ++ R+PD+ R + R ++ +
Sbjct: 80 MSQKLMAAFWPGSLTIILPMRAQAFSM--TVTGGLNTVAFRLPDNEVARAVIRAAKAPIV 137
Query: 153 LTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF-KILRPG 210
SAN +G+PS + + + ++ + A + D G G STV+D++ G ILRPG
Sbjct: 138 GPSANTSGKPSPTTAQHVWHDMAGKIAAIVDDGPTTVG-VESTVIDVS--GNVPTILRPG 194
Query: 211 S-AKEETIAILEK 222
+ +E+ +A+L +
Sbjct: 195 AITQEQLVAVLAQ 207
>gi|42520658|ref|NP_966573.1| Sua5/YciO/YrdC/YwlC family protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410398|gb|AAS14507.1| Sua5/YciO/YrdC/YwlC family protein [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 195
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 101/190 (53%), Gaps = 5/190 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+ I A++ ++ PT+T+Y AC+A +E++ +IY+IK R PL+I V D+ ++ +
Sbjct: 4 KIINAIQNNLLVCFPTETVYALACNALDNESIGKIYQIKKRSQNKPLSIFVSDIYNLTKI 63
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A L++ PGP+T +L ++ L +SIG+R+P+ I L+
Sbjct: 64 AKVKERYIDLINHFSPGPITYILPLKNNNMLPNEF--FKDSIGIRIPEHPIAISILNKLK 121
Query: 149 SALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ TS N++G+ S D +++ + + V + L SG ST++DLT K K+L
Sbjct: 122 VPIVATSTNISGKESVCKANDIPQSIKQHLSVVIEDDELVSG-IESTIIDLTE-DKIKVL 179
Query: 208 RPGSAKEETI 217
R G+ +T+
Sbjct: 180 REGAISLQTV 189
>gi|365162718|ref|ZP_09358842.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|423410925|ref|ZP_17388045.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG3O-2]
gi|423433290|ref|ZP_17410294.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG4O-1]
gi|363617446|gb|EHL68833.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|401109263|gb|EJQ17189.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG3O-2]
gi|401112341|gb|EJQ20220.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG4O-1]
Length = 346
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMAHFWPGPLTIILPRKE--GISQKVTAGLNTVGVRMPDHPIALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|418055618|ref|ZP_12693672.1| Sua5/YciO/YrdC/YwlC family protein [Hyphomicrobium denitrificans
1NES1]
gi|353209896|gb|EHB75298.1| Sua5/YciO/YrdC/YwlC family protein [Hyphomicrobium denitrificans
1NES1]
Length = 320
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 3/202 (1%)
Query: 17 GLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLA 76
G + PA EEA +++G ++A PT+T+YG DA + EAV R++ KGR +PL
Sbjct: 3 GRIVPANAEWIEEAGHLIRSGALVAFPTETVYGLGADATNGEAVARVFAAKGRPSFNPLI 62
Query: 77 ICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPD 136
+ V + + L ++ PGP+T+V+ R E++ + + ++ GL ++ +R PD
Sbjct: 63 VHVLGLEQAVIIGSFSPMARRLTETFWPGPLTLVVPRLETTEVSELVSAGLPTVALRSPD 122
Query: 137 SNFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTV 195
R + + + +A SAN +G S+ + +L E A + D G P G STV
Sbjct: 123 HPVARQLLKAAQRPIAAPSANRSGHISATCAEHVAADLGESAAVILDAGPTPRGLE-STV 181
Query: 196 VDLTRLGKFKILRPGSAKEETI 217
+ L +LRPG+ E I
Sbjct: 182 LSLVGAAPV-LLRPGTVPSEAI 202
>gi|320106655|ref|YP_004182245.1| Sua5/YciO/YrdC/YwlC family protein [Terriglobus saanensis SP1PR4]
gi|319925176|gb|ADV82251.1| Sua5/YciO/YrdC/YwlC family protein [Terriglobus saanensis SP1PR4]
Length = 214
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 12/202 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ ++ L++G V A+PTDT YG A D + AV +IYE+KGR PL++ + D +
Sbjct: 19 QHVVRCLESGMVAAIPTDTFYGLAVDPVNLRAVEQIYELKGRAKHKPLSLLIADTAHAYE 78
Query: 88 FAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A D L + PGP+T+++ G L + + G ++ +RVP++ R I +
Sbjct: 79 LARDVDTAFDKLAEKFWPGPLTIIVKAGSRLPLRVTAHTG--NVALRVPEAAIPRAIVKK 136
Query: 147 LESALALTSANLTGQPS---SVSVKDFENLWERCACVYDGGVLPSGRA-GSTVVDLTRLG 202
L + TSANL G P + V+D L + + DGG P+ R+ +T+VDL+ G
Sbjct: 137 LGLPITATSANLRGLPECNYAACVRD--QLGGQIPLIVDGG--PTARSIATTIVDLSGGG 192
Query: 203 K-FKILRPGSAKEETIAILEKH 223
+ ILR G+ IA+ +H
Sbjct: 193 NSWMILREGAIPTHEIALALQH 214
>gi|406912274|gb|EKD51918.1| hypothetical protein ACD_62C00158G0005 [uncultured bacterium]
Length = 198
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A+Q ++ G+VIAVPTDT+YG A +++ I++IK R PL I + + ++
Sbjct: 7 QAVQKIEKGRVIAVPTDTVYGLAASIRFPDSIQNIFDIKKRPFNKPLVIQIAATTQLDSL 66
Query: 89 AVTDHLPHGL--LDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR--VIA 144
VTD +P L S PGP+T+V N+ + + G ++G+R+ D +R ++
Sbjct: 67 -VTD-IPQIFHQLKSFWPGPLTMVF-EANIQNIPQKIRAGTNTVGIRIADCQLLRELILQ 123
Query: 145 RGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
G LA+ SAN++ PS+ + K+ E + + V DGG G+ STVV L +
Sbjct: 124 TG---PLAIPSANVSDFPSAKTRKEVEGYFGKEFPVLDGGPCSLGKE-STVVSLVG-NEL 178
Query: 205 KILRPGSAKEETIAILEKHS 224
KILR G EE +L+KH+
Sbjct: 179 KILRKGVITEE--ELLKKHN 196
>gi|304393470|ref|ZP_07375398.1| Sua5/YciO/YrdC family protein [Ahrensia sp. R2A130]
gi|303294477|gb|EFL88849.1| Sua5/YciO/YrdC family protein [Ahrensia sp. R2A130]
Length = 337
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 98/184 (53%), Gaps = 4/184 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A + L+ G ++ VPT+T+YG A DAC++ AV +IY KGR +PL + V +
Sbjct: 24 EQAARILREGGLLGVPTETVYGLAADACNATAVAKIYAAKGRPDFNPLIVHVDSLKMAEE 83
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
AV D L L + PGP+T+VL + L S+ GL ++ +R P +A L
Sbjct: 84 LAVFDPLSRRLAEEFWPGPLTLVLPLRGDAALAPSVTAGLGTVALRQPIGVLAE-LASSL 142
Query: 148 ESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ +A SAN +G+ S + + ++L +R V DGG G ST+V T GK I
Sbjct: 143 GTGIAAPSANSSGRISPTTAQHVADDLEDRVDLVLDGGTCAVG-VESTIVKCTN-GKINI 200
Query: 207 LRPG 210
LR G
Sbjct: 201 LRTG 204
>gi|418326930|ref|ZP_12938105.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU071]
gi|365224036|gb|EHM65306.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU071]
Length = 347
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H +E Q G ++A+PT+T+YG +A + EAV IY KGR +PL + + + +
Sbjct: 20 HIDEIKQTFLDGGLVAIPTETVYGLGANARNEEAVENIYVAKGRPSDNPLIVHIHSIEQL 79
Query: 86 NRFA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ F D L+D PGP++ +L + L + GLESI VR+P R +
Sbjct: 80 DDFVEYIDDKVKVLMDEFWPGPISFILPLKQGY-LCSKVTGGLESIAVRMPSHKIGRALL 138
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ ++ +A SAN++G+PS + +L + + +G G STV+D T+
Sbjct: 139 QIVDEPIAAPSANISGRPSPTTFDHVNRDLNGKVNGIVNGDQCEEGLE-STVIDCTQF-P 196
Query: 204 FKILRPGSAKEETIAILEKHSL 225
F+I RPGS ++ I HS+
Sbjct: 197 FRIARPGSITQDMIETKLPHSI 218
>gi|257416746|ref|ZP_05593740.1| Sua5/YciO/YrdC/YwlC [Enterococcus faecalis ARO1/DG]
gi|257158574|gb|EEU88534.1| Sua5/YciO/YrdC/YwlC [Enterococcus faecalis ARO1/DG]
Length = 340
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNETAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGEIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|390961755|ref|YP_006425589.1| putative translation factor, sua5 family [Thermococcus sp. CL1]
gi|390520063|gb|AFL95795.1| putative translation factor, sua5 family [Thermococcus sp. CL1]
Length = 339
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 11/185 (5%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
GK++A PT+T+YG DA + EAV RI+E KGR +PL I + D SD+ + A +P
Sbjct: 26 GKLVAFPTETVYGLGADALNGEAVRRIFEAKGRPADNPLIIHIADFSDLKKLA--SEVPK 83
Query: 97 G---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L + PGP+T VL R E L GL+++ VR+P + R + +A
Sbjct: 84 EAKLLAEEFWPGPLTFVLPRKEEVPL--VTTGGLDTVAVRMPSHPIALSLIRA-STPIAA 140
Query: 154 TSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSA 212
SAN++G+PS +++ ++ + + + DGG G STV+DL+ K +LRPG
Sbjct: 141 PSANISGKPSPTLAEHVIDDFYGKIKAIIDGGETRIG-VESTVIDLSS-EKPTLLRPGGL 198
Query: 213 KEETI 217
E I
Sbjct: 199 PLEEI 203
>gi|319936647|ref|ZP_08011060.1| hypothetical protein HMPREF9488_01893 [Coprobacillus sp. 29_1]
gi|319808204|gb|EFW04769.1| hypothetical protein HMPREF9488_01893 [Coprobacillus sp. 29_1]
Length = 200
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EE ++ V+A PT+T+YG S A++++ E K R ++ + + V D DI +
Sbjct: 11 EEVCNIIECNGVVAFPTETVYGVGVKFGSKIALDKLMEAKNRDYSKAITLMVADEKDIEK 70
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+A ++ + +PG +T+V + ++ ++ + G E+IG+R+PD +V + +
Sbjct: 71 YAFVSDDAKKIVQAFMPGMITLVFKKKDT--VDPIMTNGKETIGIRIPDDQYVLTLLKK- 127
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWE-RCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ +TSANL+ P++ S K+ N + R V DG + STVVD++R + KI
Sbjct: 128 AGPMLVTSANLSNHPNTTSTKEVLNQLDGRIDLVVDGQT--TDNVASTVVDVSR-NEMKI 184
Query: 207 LRPGSAKEETI 217
LR G +E I
Sbjct: 185 LREGKITKEDI 195
>gi|385800854|ref|YP_005837258.1| Sua5/YciO/YrdC/YwlC family protein [Halanaerobium praevalens DSM
2228]
gi|309390218|gb|ADO78098.1| Sua5/YciO/YrdC/YwlC family protein [Halanaerobium praevalens DSM
2228]
Length = 377
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 100/193 (51%), Gaps = 7/193 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A + L +++A+PT+T+YG A +A S +AV++I+ KGR +PL + + D + +
Sbjct: 42 KAAELLSQNQLVALPTETVYGLAANALSPKAVSKIFAAKGRPQDNPLIVHIADQAQLKEL 101
Query: 89 --AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A L+D PGP+T++ + S + + GLE+I +R+P + +
Sbjct: 102 TAAKITAKTQALMDHFWPGPLTIIFPK--SKKVPNLTSAGLETIAIRMPAHPLILAVIES 159
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
LA SAN +G PS + + +L + + DGG G STVVDL R + K
Sbjct: 160 SGLPLAAPSANTSGFPSPTQAEHVYHDLKGKIPLILDGGPCQVG-VESTVVDL-RSAQVK 217
Query: 206 ILRPGSAKEETIA 218
+LRPG + IA
Sbjct: 218 VLRPGGISRQEIA 230
>gi|333911652|ref|YP_004485385.1| Sua5/YciO/YrdC/YwlC family protein [Methanotorris igneus Kol 5]
gi|333752241|gb|AEF97320.1| Sua5/YciO/YrdC/YwlC family protein [Methanotorris igneus Kol 5]
Length = 210
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 108/205 (52%), Gaps = 22/205 (10%)
Query: 18 LVRPATEAHAEEAIQALKT-------GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRK 70
++ E + +E ++A+K GKV+ TDTLYG +A AV ++Y+IK R
Sbjct: 1 MIIKINEMNEKEKMEAIKKIQKMILEGKVVICGTDTLYGICVNALDENAVKKVYKIKKRD 60
Query: 71 HTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGL--- 127
++I + D +I ++A + + ++D +PGP+T++L + K + P +
Sbjct: 61 FGKYISISLKDKEEIEKYAYVNDVARKIIDKFMPGPITIILKK-------KDVIPDIVAK 113
Query: 128 ESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVL 186
+ IG+RVPD++ VR +A L TSAN++G+ S SV + E + + + D G
Sbjct: 114 DYIGIRVPDNDVVRELAI---VPLTSTSANISGEKSPTSVDEISEEIKKNVDVIVDTGKC 170
Query: 187 PSGRAGSTVVDLTRLGKFKILRPGS 211
+ ST++ + GK +++R G+
Sbjct: 171 KYSKP-STIIKICESGKIELVREGA 194
>gi|334139620|ref|YP_004532814.1| translation factor SUA5 [Novosphingobium sp. PP1Y]
gi|333937638|emb|CCA90996.1| translation factor SUA5 [Novosphingobium sp. PP1Y]
Length = 321
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 114/224 (50%), Gaps = 9/224 (4%)
Query: 9 QVSVENKAGLVRPA---TEAHA-EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIY 64
Q S + AG RPA ++ H EA + L+ G ++A+PT+T+YG A A EAV IY
Sbjct: 3 QSSEHSPAG--RPALLSSDPHGIAEAARLLREGGLVALPTETVYGLAARADRDEAVASIY 60
Query: 65 EIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLN 124
KGR +PL + V D+ R AV D L + PG +T+VL + + L ++
Sbjct: 61 CAKGRPSFNPLIVHVADLDSARRLAVFDERALLLAERFWPGALTMVLPVQDDAPLAAAVT 120
Query: 125 PGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDG 183
GL ++ +R P +R + LA SAN +G S + E+L R V DG
Sbjct: 121 AGLPTVALRCPAHPVMRSVIAETRLPLAAPSANRSGGVSPTTPSHVVESLGGRIDAVLDG 180
Query: 184 GVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETI-AILEKHSLV 226
G +G ST++ L G++++LRPG E I A+L +S V
Sbjct: 181 GACEAGLE-STIIALREGGRWQVLRPGPIPESEISAVLGSNSDV 223
>gi|414170451|ref|ZP_11426037.1| Sua5/YciO/YrdC/YwlC family protein [Afipia clevelandensis ATCC
49720]
gi|410884601|gb|EKS32425.1| Sua5/YciO/YrdC/YwlC family protein [Afipia clevelandensis ATCC
49720]
Length = 370
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 91
+ L+ G ++A PT+T+YG CDA ++ AV R+YE KGR +PL V D+ + A
Sbjct: 63 RCLEDGGLVAFPTETVYGLGCDATNARAVARLYEAKGRPSFNPLIAHVSDLQAARKIARF 122
Query: 92 DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESAL 151
D L ++ PGP+T+VL + + GLE+I VRVP R I R +
Sbjct: 123 DETSLRLAEAFWPGPLTLVLPKATGCPVSDLATAGLETIAVRVPAHPVARDILRAFGKPV 182
Query: 152 ALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK---IL 207
SAN++G S + + +L R + DGG + G V+ T +G F+ +L
Sbjct: 183 VAPSANISGHVSPTTAEHVLGDLDGRIDLIVDGGPVSVG------VESTIVGCFETPLLL 236
Query: 208 RPGSAKEETIAILEKHSLVEEP 229
RPG E I + L P
Sbjct: 237 RPGGLPREDIERVLDDKLARMP 258
>gi|312134922|ref|YP_004002260.1| sua5/ycio/yrdc/ywlc family protein [Caldicellulosiruptor owensensis
OL]
gi|311774973|gb|ADQ04460.1| Sua5/YciO/YrdC/YwlC family protein [Caldicellulosiruptor owensensis
OL]
Length = 348
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 104/186 (55%), Gaps = 6/186 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A L+ G ++A PT+T+YG +A +AV++I+ KGR +PL + + +
Sbjct: 17 EKAASILREGGLVAFPTETVYGLGANALLKDAVDKIFWAKGRPQDNPLIVHISSKEMLGM 76
Query: 88 FA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A +TD + L++ PGP+T+VL + S + ++ GL ++GVR+P + + R
Sbjct: 77 CAEITDERVYMLIERFWPGPLTIVLPKKNS--IPDNVTAGLSTVGVRMPANKIALELIRL 134
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+ +A SAN++G+PS K E+L + + DGG G STVVDL+ G+
Sbjct: 135 SDVPVAAPSANVSGKPSPTEAKHVIEDLMNKVDVIIDGGKCSFGLE-STVVDLSG-GEAV 192
Query: 206 ILRPGS 211
ILRPG+
Sbjct: 193 ILRPGA 198
>gi|404482923|ref|ZP_11018148.1| Sua5/YciO/YrdC/YwlC family protein [Clostridiales bacterium
OBRC5-5]
gi|404344013|gb|EJZ70372.1| Sua5/YciO/YrdC/YwlC family protein [Clostridiales bacterium
OBRC5-5]
Length = 365
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA +K G ++A PT+T+YG +A EA +IY KGR +PL + + D+
Sbjct: 28 KEAAIIIKNGGLVAFPTETVYGLGANALMPEAAKKIYAAKGRPSDNPLIVHISKTEDVKD 87
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
A + +P + L + PGP+TVVL + S + + + GL+++ +R+P+SN R +
Sbjct: 88 IA--NDIPELFYTLANKFWPGPMTVVLKK--KSIIPDATSGGLDTVAIRLPESNIARALI 143
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS FE++ + + DGG + G ST+VDLT
Sbjct: 144 EVAGVPIAAPSANTSGRPSPTKASHVFEDMNSKIEMIIDGGEVGIG-VESTIVDLTE-NT 201
Query: 204 FKILRPGSAKEETI 217
+LRPG+ E +
Sbjct: 202 PTLLRPGAITLEML 215
>gi|257421858|ref|ZP_05598848.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|422707079|ref|ZP_16764776.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0043]
gi|257163682|gb|EEU93642.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|315155437|gb|EFT99453.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0043]
Length = 340
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + + K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNVPRDT-FSKTVTGGLETVAFRMPDNQATLTLIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGSTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|420164482|ref|ZP_14671211.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM095]
gi|420169230|ref|ZP_14675833.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM087]
gi|394231587|gb|EJD77213.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM095]
gi|394231693|gb|EJD77317.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM087]
Length = 347
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H +E Q G ++A+PT+T+YG +A + EAV IY KGR +PL + + + +
Sbjct: 20 HIDEIKQTFLDGGLVAIPTETVYGLGANARNEEAVENIYVAKGRPSDNPLIVHIHSIGQL 79
Query: 86 NRFA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ F D L+D PGP++ +L + L + GLESI VR+P R +
Sbjct: 80 DDFVEYIDDKVKVLMDEFWPGPISFILPLKQGY-LCSKVTGGLESIAVRMPSHKIGRALL 138
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ ++ +A SAN++G+PS + +L + + +G G STV+D T+
Sbjct: 139 QIVDEPIAAPSANISGRPSPTTFDHVNRDLNGKVNGIVNGDQCEEGLE-STVIDCTQF-P 196
Query: 204 FKILRPGSAKEETIAILEKHSL 225
F+I RPGS ++ I HS+
Sbjct: 197 FRIARPGSITQDMIETKLPHSI 218
>gi|239831281|ref|ZP_04679610.1| Sua5/YciO/YrdC/YwlC family protein [Ochrobactrum intermedium LMG
3301]
gi|239823548|gb|EEQ95116.1| Sua5/YciO/YrdC/YwlC family protein [Ochrobactrum intermedium LMG
3301]
Length = 355
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 8/204 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL V ++ R+
Sbjct: 46 RAVEVLRRGGLVAIPTETVYGLAADASNGEGVAGIFAAKGRPQFNPLIAHVSGIAMAERY 105
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVIA 144
D L L + PGP+T+VL + + ++ ++P GL+++ +R+P VR I
Sbjct: 106 VTFDALSRKLAEMFWPGPLTIVLPLKDRQDADRPIHPLVTAGLQTLAIRMPLGR-VRDII 164
Query: 145 RGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
GL+S +A SAN +G+ S S +L R + D G P G + + K
Sbjct: 165 EGLDSPVAAPSANTSGRISPTSASAVAGDLGNRLDLILDAG--PCGVGVESTIVKVDGNK 222
Query: 204 FKILRPGSAKEETIAILEKHSLVE 227
+LRPG E I + LV
Sbjct: 223 VHLLRPGGLAAEEIEAVIGEKLVR 246
>gi|313127651|ref|YP_004037921.1| translation factor sua5 [Halogeometricum borinquense DSM 11551]
gi|448286819|ref|ZP_21478038.1| translation factor sua5 [Halogeometricum borinquense DSM 11551]
gi|312294016|gb|ADQ68476.1| translation factor SUA5 [Halogeometricum borinquense DSM 11551]
gi|445573358|gb|ELY27880.1| translation factor sua5 [Halogeometricum borinquense DSM 11551]
Length = 208
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 79/159 (49%), Gaps = 4/159 (2%)
Query: 43 PTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSL 102
PT+T+YG D ++AV R++E+KGR PL+I V DV + +
Sbjct: 24 PTETVYGLGADGTDADAVERVFELKGRSRDKPLSIGVPDVDAAREYTRLTSFDADFMAEF 83
Query: 103 LPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQP 162
LPGPVTVV+ RG S L L G + +GVRVPD R + + TSAN +G P
Sbjct: 84 LPGPVTVVVERG--SQLPDVLTAGGDRVGVRVPDHEVALDFFRRADCPVTATSANRSGAP 141
Query: 163 SSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTR 200
S + L + V D G P G GSTVVD +R
Sbjct: 142 SVTHPDQLDATLKDSVGAVIDAGEAPGG-TGSTVVDPSR 179
>gi|442805979|ref|YP_007374128.1| tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
[Clostridium stercorarium subsp. stercorarium DSM 8532]
gi|442741829|gb|AGC69518.1| tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
[Clostridium stercorarium subsp. stercorarium DSM 8532]
Length = 349
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 8/185 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA AL+ GK++A PT+T+YG +A SEAV IY KGR +PL + + D D+
Sbjct: 18 EAAMALREGKLVAFPTETVYGLGANALDSEAVRSIYIAKGRPSDNPLIVHIAD-RDMLEP 76
Query: 89 AVTDHLPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
VT+ P+ L+ + PGP+T++L + + + GL ++ +R+PD++ + R
Sbjct: 77 LVTEISPNALKLMSAYWPGPLTIILKK--TDIVPDVTTGGLNTVAIRMPDNDIALELIRK 134
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN +G+PS K E+L R + + DGG G STVVD+T
Sbjct: 135 AGVPVAAPSANRSGRPSPTMAKHVLEDLDGRISYIIDGGPCRVG-VESTVVDMTSEPAV- 192
Query: 206 ILRPG 210
ILRPG
Sbjct: 193 ILRPG 197
>gi|37678973|ref|NP_933582.1| translation factor [Vibrio vulnificus YJ016]
gi|37197715|dbj|BAC93553.1| putative translation factor [Vibrio vulnificus YJ016]
Length = 328
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 10/187 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A + L +G+++A+PT+T+YG A DA + +AV +I+ KGR PL + +G V +
Sbjct: 23 DQAKEILASGELVAIPTETVYGLAADATNPDAVKKIFAAKGRPADHPLIVHIGRVEQLTD 82
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+A+ +P + L + PGPVT++L + + ++ + GLE+IG+R+P + +
Sbjct: 83 WAID--IPEEAYTLAQAYWPGPVTLLLKK--APHVTPVVTGGLETIGIRMPAHDVFATLL 138
Query: 145 RGLESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ A+A SAN + S S K N L + A V DGG G ST+VDLT
Sbjct: 139 QSSGMAVAAPSANPYKKLSPTSAKHVMNSLGGKIAAVLDGGDCAHGLE-STIVDLTE-KP 196
Query: 204 FKILRPG 210
F+ILR G
Sbjct: 197 FRILRTG 203
>gi|399517410|ref|ZP_10758961.1| YrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Leuconostoc
pseudomesenteroides 4882]
gi|398647689|emb|CCJ66988.1| YrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Leuconostoc
pseudomesenteroides 4882]
Length = 337
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA L+ G+V+A PT+T+YG DA + AV +++ KGR +PL + V D S ++ F
Sbjct: 15 EASALLQQGEVVAFPTETVYGLGADATNEAAVQKVFTAKGRPSDNPLIMTVADESQLDEF 74
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
V L+ + PG +T++L + +E + GL+++ R+PD++ R + R
Sbjct: 75 VVISEAAKTLMAAFWPGSLTIILPI-KPGRVEMIVTGGLQTVAFRLPDNDAARQLIRVAG 133
Query: 149 SALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ SAN++G+PS + + + ++ + A + D G G STV+D++ IL
Sbjct: 134 VPIVGPSANISGKPSPTTAQHVWHDMQGKIAGIVDDGPTTVG-VESTVIDMSATTP-TIL 191
Query: 208 RPGSAKEETI 217
RPG+ ++ +
Sbjct: 192 RPGAVTQQQL 201
>gi|338739783|ref|YP_004676745.1| hypothetical protein HYPMC_2960 [Hyphomicrobium sp. MC1]
gi|337760346|emb|CCB66177.1| conserved protein of unknown function, Sua5/YciO/YrdC domain
[Hyphomicrobium sp. MC1]
Length = 322
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 109/217 (50%), Gaps = 3/217 (1%)
Query: 17 GLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLA 76
G + PA + EA Q ++ G ++A PT+T+YG DA + EAV RI+E KGR +PL
Sbjct: 3 GRIVPANKEWIAEAGQMIRAGALVAFPTETVYGLGADATNGEAVARIFEAKGRPIFNPLI 62
Query: 77 ICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPD 136
+ V + V L+++ PGP+T+V+ R E++++ + ++ GL ++ +R PD
Sbjct: 63 VHVLGLEQALIIGVLSPAARRLIEAFWPGPLTLVVPRTETTDVSQLVSAGLPTVALRSPD 122
Query: 137 SNFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTV 195
R + LA SAN +G S+ + ++ + A + D G G STV
Sbjct: 123 HPVARALLAEAHRPLAAPSANRSGHVSATRAEHVAADIGGKAALILDDGPTKLGLE-STV 181
Query: 196 VDLTRLGKFKILRPGSAKEETIAILEKHSLVEEPAAG 232
V L G +LRPG+ E I + L+ AG
Sbjct: 182 VSLVD-GAPVLLRPGAITAEAIEEVIGERLIRREEAG 217
>gi|256003268|ref|ZP_05428260.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium thermocellum DSM
2360]
gi|385777563|ref|YP_005686728.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium thermocellum DSM
1313]
gi|419722890|ref|ZP_14250027.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium thermocellum AD2]
gi|419726390|ref|ZP_14253413.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium thermocellum YS]
gi|255992959|gb|EEU03049.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium thermocellum DSM
2360]
gi|316939243|gb|ADU73277.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium thermocellum DSM
1313]
gi|380770442|gb|EIC04339.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium thermocellum YS]
gi|380781270|gb|EIC10931.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium thermocellum AD2]
Length = 351
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 15/210 (7%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + L+ G ++A PT+T+YG DA AV +I+E KGR +PL + + D+ +
Sbjct: 21 AAEVLRGGGLVAFPTETVYGLGADALDENAVKKIFEAKGRPSDNPLIVHIAGKEDV--YG 78
Query: 90 VTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ ++P L+D PGP+T+VL + S + + GL ++G+R P + R
Sbjct: 79 LAANVPPKAQILMDRFWPGPLTLVLEK--SDKIPSVITAGLSTVGLRAPSHPIALALIRE 136
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SANL+G+PS K ++L++R + DGG G STV+D+T
Sbjct: 137 AGIPIAAPSANLSGRPSPTVPKHVIDDLYDRVDVIIDGGNANIG-VESTVLDVTADVPV- 194
Query: 206 ILRPGSAKEETIAILEKH-----SLVEEPA 230
ILRPG E + + K+ SL+++PA
Sbjct: 195 ILRPGGVSFEQLKDVLKNVAMDPSLMKKPA 224
>gi|229087815|ref|ZP_04219931.1| hypothetical protein bcere0022_43720 [Bacillus cereus Rock3-44]
gi|228695490|gb|EEL48359.1| hypothetical protein bcere0022_43720 [Bacillus cereus Rock3-44]
Length = 347
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 106/193 (54%), Gaps = 8/193 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S +
Sbjct: 22 QEAARLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGARSQLGE 81
Query: 88 FAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
V + P L+ PGP+T++L + + + + + GL+++GVR+PD +
Sbjct: 82 I-VREITPVAEELMKHFWPGPLTIILPKKDG--ISEKVTAGLDTVGVRMPDHPVALALIE 138
Query: 146 GLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+A SAN +G+PS +++ +E+L E+ A + DGG G STVVD T
Sbjct: 139 AANVPVAAPSANRSGRPSPTLAHHVYEDLNEKIAGIVDGGATGVG-VESTVVDCTSEVP- 196
Query: 205 KILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 TILRPGGITKEQL 209
>gi|78044541|ref|YP_361354.1| Sua5/YciO/YrdC/YwlC family protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996656|gb|ABB15555.1| Sua5/YciO/YrdC/YwlC family protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 342
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 104/193 (53%), Gaps = 10/193 (5%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA + +K G+++A PT+T+YG DA + AV +I+ KGR +PL + + DI R
Sbjct: 20 EAAEYIKKGELVAFPTETVYGLGADAFNPAAVLKIFAAKGRPQDNPLIVHIARHEDIYRV 79
Query: 89 AV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A D L++ PGP+T+VL R E +L ++ GL ++ VR+PD ++
Sbjct: 80 AARVDVRAQKLMEKFWPGPLTIVLPRRE--DLPAVVSAGLPTVAVRLPDHPVAVMLIEAA 137
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAG--STVVDLTRLGKF 204
++ +A SAN +G+PS S + ++L V GG + R G STV+DLT +
Sbjct: 138 QTPIAAPSANRSGRPSPTSYEHVLDDLSGIIPVVLAGG---NCRVGVESTVLDLT-VTPP 193
Query: 205 KILRPGSAKEETI 217
+LRPG E +
Sbjct: 194 VVLRPGGITPEML 206
>gi|423589147|ref|ZP_17565233.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD045]
gi|401224386|gb|EJR30940.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD045]
Length = 346
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVGEKLMAHFWPGPLTIILPRKE--GISEKVTAGLNTVGVRMPDHPIALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSTVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|420186325|ref|ZP_14692396.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM040]
gi|394252542|gb|EJD97574.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM040]
Length = 347
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 5/202 (2%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H +E Q G ++A+PT+T+YG +A + EAV IY KGR +PL + + + +
Sbjct: 20 HIDEIKQTFLDGGLVAIPTETVYGLGANARNEEAVENIYVAKGRPSDNPLIVHIHSIEQL 79
Query: 86 NRFA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ F D L+D PGP++ +L + L + GLESI VR+P R +
Sbjct: 80 DDFVEYIDDKVKVLMDEFWPGPISFILPLKQGY-LCSKVTGGLESIAVRMPSHKIGRALL 138
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ ++ +A SAN++G+PS + + +L + + +G G STV+D T+
Sbjct: 139 QIVDEPIAAPSANISGRPSPTTFEHVNRDLNGKVNGIVNGDQCEEGLE-STVIDCTQF-P 196
Query: 204 FKILRPGSAKEETIAILEKHSL 225
F+I RPGS ++ I HS+
Sbjct: 197 FRIARPGSITQDMIENKLPHSI 218
>gi|242241522|ref|ZP_04795967.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
W23144]
gi|418614602|ref|ZP_13177565.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU118]
gi|420174283|ref|ZP_14680736.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM061]
gi|420178544|ref|ZP_14684874.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM057]
gi|420181338|ref|ZP_14687541.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM053]
gi|420193548|ref|ZP_14699399.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM023]
gi|242235065|gb|EES37376.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
W23144]
gi|374819492|gb|EHR83614.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU118]
gi|394245217|gb|EJD90534.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM061]
gi|394246267|gb|EJD91528.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM057]
gi|394246686|gb|EJD91940.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM053]
gi|394259815|gb|EJE04646.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM023]
Length = 347
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H +E Q G ++A+PT+T+YG +A + EAV IY KGR +PL + + + +
Sbjct: 20 HIDEIKQTFLDGGLVAIPTETVYGLGANARNEEAVENIYVAKGRPSDNPLIVHIHSIEQL 79
Query: 86 NRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ F +H+ L+D PGP++ +L + L + GLESI VR+P R
Sbjct: 80 DDFV--EHIDDKVKVLMDEFWPGPISFILPLKQGY-LCSKVTGGLESIAVRMPSHKIGRA 136
Query: 143 IARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ + ++ +A SAN++G+PS + + +L + + +G G STV+D T+
Sbjct: 137 LLQIVDEPIAAPSANISGRPSPTTFEHVNRDLNGKVNGIVNGDQCEEGLE-STVIDCTQF 195
Query: 202 GKFKILRPGSAKEETIAILEKHSL 225
F+I RPGS ++ I HS+
Sbjct: 196 -PFRIARPGSITQDMIETKLPHSI 218
>gi|402496658|ref|YP_006555918.1| translation factor SUA5 [Wolbachia endosymbiont of Onchocerca
ochengi]
gi|398649931|emb|CCF78101.1| putative translation factor SUA5 [Wolbachia endosymbiont of
Onchocerca ochengi]
Length = 194
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 101/189 (53%), Gaps = 5/189 (2%)
Query: 31 IQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAV 90
+ A++ ++ PT+T+Y AC+A S A+ +IY++K R PL+I V D+S + R A
Sbjct: 6 VNAVRNNLLVCFPTETIYALACNALDSRAIKKIYQVKKRSQNKPLSIFVNDISSLARIAK 65
Query: 91 TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA 150
+ L++ PGP+T +L ++ L G S+G+R+PD V I L++
Sbjct: 66 LEEKYTNLVNHFSPGPITYILPLKNNNILPNEFFKG--SVGIRIPDHPIVISILNELKTP 123
Query: 151 LALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRP 209
L TS N++G+ + +++ + + V + L SG ST++DLT+ K +++R
Sbjct: 124 LVATSVNISGEQGAYKASGIPKSIKQHLSAVAEDDKLVSG-IESTIIDLTQ-DKIEVIRE 181
Query: 210 GSAKEETIA 218
G + I+
Sbjct: 182 GMISLQMIS 190
>gi|320157253|ref|YP_004189632.1| yrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Vibrio vulnificus MO6-24/O]
gi|319932565|gb|ADV87429.1| yrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Vibrio vulnificus MO6-24/O]
Length = 320
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 10/187 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A + L +G+++A+PT+T+YG A DA + +AV +I+ KGR PL + +G V +
Sbjct: 15 DQAKEILASGELVAIPTETVYGLAADATNPDAVKKIFAAKGRPADHPLIVHIGRVEQLTD 74
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+A+ +P + L + PGPVT++L + + ++ + GLE+IG+R+P + +
Sbjct: 75 WAID--IPEEAYTLAQAYWPGPVTLLLKK--APHVTPVVTGGLETIGIRMPAHDVFATLL 130
Query: 145 RGLESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ A+A SAN + S S K N L + A V DGG G ST+VDLT
Sbjct: 131 QSSGMAVAAPSANPYKKLSPTSAKHVMNSLGGKIAAVLDGGDCAHGLE-STIVDLTE-KP 188
Query: 204 FKILRPG 210
F+ILR G
Sbjct: 189 FRILRTG 195
>gi|319898590|ref|YP_004158683.1| hypothetical protein BARCL_0418 [Bartonella clarridgeiae 73]
gi|319402554|emb|CBI76099.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 320
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++ P ++A+ L+ GK++A+PT+T+YG A DA +AV I+ KGR +PL +
Sbjct: 2 MILPLNSEAIKQAVTILQQGKLVALPTETVYGLAGDATDGKAVASIFSTKGRPPFNPLIV 61
Query: 78 CVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
V D+ + D L L+++ PGP+TVVL N+ GL ++ VR P
Sbjct: 62 HVSDIVMAECYVEIDLLSRRLMEAFWPGPLTVVLPLKVHHNIHPLTTAGLNTLAVRFPRG 121
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVV 196
F ++ R LA SAN +G+ S S F +L + DGG G ST++
Sbjct: 122 GFAEIV-RHFGRPLAAPSANQSGKLSPTSATSVFTSLGTSVPLIIDGGDSKIGLE-STII 179
Query: 197 DLTRLGKFKILRPGSAKEETIAILEKHSL 225
+ + ILRPG E I + K S+
Sbjct: 180 KICDENVY-ILRPGGLAIEEIERVAKKSV 207
>gi|27363877|ref|NP_759405.1| Sua5 YciO YrdC YwlC family protein [Vibrio vulnificus CMCP6]
gi|27359994|gb|AAO08932.1| Sua5 YciO YrdC YwlC family protein [Vibrio vulnificus CMCP6]
Length = 328
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 10/187 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A + L +G+++A+PT+T+YG A DA + +AV +I+ KGR PL + +G V +
Sbjct: 23 DQAKEILASGELVAIPTETVYGLAADATNPDAVKKIFAAKGRPADHPLIVHIGRVEQLTD 82
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+A+ +P + L + PGPVT++L + + ++ + GLE+IG+R+P + +
Sbjct: 83 WAID--IPEEAYTLAQAYWPGPVTLLLKK--APHVTPVVTGGLETIGIRMPAHDVFATLL 138
Query: 145 RGLESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ A+A SAN + S S K N L + A V DGG G ST+VDLT
Sbjct: 139 QSSGMAVAAPSANPYKKLSPTSAKHVMNSLGGKIAAVLDGGDCAHGLE-STIVDLTE-KP 196
Query: 204 FKILRPG 210
F+ILR G
Sbjct: 197 FRILRTG 203
>gi|229050996|ref|ZP_04194545.1| hypothetical protein bcere0027_49490 [Bacillus cereus AH676]
gi|228722373|gb|EEL73769.1| hypothetical protein bcere0027_49490 [Bacillus cereus AH676]
Length = 346
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMAHFWPGPLTIILPRKE--GISEKVTAGLNTVGVRMPDHPIALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSTVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|229153489|ref|ZP_04281667.1| hypothetical protein bcere0011_50190 [Bacillus cereus m1550]
gi|228630093|gb|EEK86744.1| hypothetical protein bcere0011_50190 [Bacillus cereus m1550]
Length = 346
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMAHFWPGPLTIILPRKE--GISEKVTAGLNTVGVRMPDHPIALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSTVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|30023356|ref|NP_834987.1| SUA5 protein [Bacillus cereus ATCC 14579]
gi|229112739|ref|ZP_04242272.1| hypothetical protein bcere0018_49780 [Bacillus cereus Rock1-15]
gi|229130575|ref|ZP_04259531.1| hypothetical protein bcere0015_50080 [Bacillus cereus BDRD-Cer4]
gi|229147866|ref|ZP_04276207.1| hypothetical protein bcere0012_49890 [Bacillus cereus BDRD-ST24]
gi|296505750|ref|YP_003667450.1| integral membrane protein [Bacillus thuringiensis BMB171]
gi|423644488|ref|ZP_17620105.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD166]
gi|423651167|ref|ZP_17626737.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD169]
gi|423658241|ref|ZP_17633540.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD200]
gi|29898917|gb|AAP12188.1| SUA5 protein [Bacillus cereus ATCC 14579]
gi|228635516|gb|EEK92005.1| hypothetical protein bcere0012_49890 [Bacillus cereus BDRD-ST24]
gi|228652914|gb|EEL08796.1| hypothetical protein bcere0015_50080 [Bacillus cereus BDRD-Cer4]
gi|228670720|gb|EEL26031.1| hypothetical protein bcere0018_49780 [Bacillus cereus Rock1-15]
gi|296326802|gb|ADH09730.1| integral membrane protein [Bacillus thuringiensis BMB171]
gi|401270612|gb|EJR76632.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD166]
gi|401279445|gb|EJR85371.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD169]
gi|401287971|gb|EJR93733.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD200]
Length = 346
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMAHFWPGPLTIILPRKE--GISEKVTAGLNTVGVRMPDHPIALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSTVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|423386814|ref|ZP_17364069.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG1X1-2]
gi|423526854|ref|ZP_17503299.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HuB1-1]
gi|401630666|gb|EJS48464.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG1X1-2]
gi|402454726|gb|EJV86516.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HuB1-1]
Length = 346
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMAHFWPGPLTIILPRKE--GISEKVTAGLNTVGVRMPDHPIALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSTVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|423583497|ref|ZP_17559608.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD014]
gi|401209557|gb|EJR16316.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD014]
Length = 346
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMAHFWPGPLTIILPRKE--GISEKVTAGLNTVGVRMPDHPIALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|218233574|ref|YP_002370102.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus B4264]
gi|218161531|gb|ACK61523.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus B4264]
Length = 346
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 105/193 (54%), Gaps = 8/193 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLDG 81
Query: 88 FAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
VT+ P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 82 I-VTEIPPVAEKLMAHFWPGPLTIILPRKE--GISEKVTAGLNTVGVRMPDHPIALALIE 138
Query: 146 GLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 139 EANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSTVP- 196
Query: 205 KILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 TILRPGGITKEQL 209
>gi|206970259|ref|ZP_03231212.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus AH1134]
gi|228924061|ref|ZP_04087337.1| hypothetical protein bthur0011_50340 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|229072792|ref|ZP_04205991.1| hypothetical protein bcere0025_49520 [Bacillus cereus F65185]
gi|229082540|ref|ZP_04215003.1| hypothetical protein bcere0023_51570 [Bacillus cereus Rock4-2]
gi|229181573|ref|ZP_04308899.1| hypothetical protein bcere0005_49130 [Bacillus cereus 172560W]
gi|229193577|ref|ZP_04320521.1| hypothetical protein bcere0002_52210 [Bacillus cereus ATCC 10876]
gi|423427416|ref|ZP_17404447.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG3X2-2]
gi|423506791|ref|ZP_17483380.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HD73]
gi|449092389|ref|YP_007424830.1| sua5/yciO/yrdC/ywlC family protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|206734836|gb|EDZ52005.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus AH1134]
gi|228589882|gb|EEK47757.1| hypothetical protein bcere0002_52210 [Bacillus cereus ATCC 10876]
gi|228601941|gb|EEK59436.1| hypothetical protein bcere0005_49130 [Bacillus cereus 172560W]
gi|228700972|gb|EEL53495.1| hypothetical protein bcere0023_51570 [Bacillus cereus Rock4-2]
gi|228710283|gb|EEL62258.1| hypothetical protein bcere0025_49520 [Bacillus cereus F65185]
gi|228835551|gb|EEM80916.1| hypothetical protein bthur0011_50340 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|401108755|gb|EJQ16685.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG3X2-2]
gi|402446289|gb|EJV78151.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HD73]
gi|449026146|gb|AGE81309.1| sua5/yciO/yrdC/ywlC family protein [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 346
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMAHFWPGPLTIILPRKE--GISEKVTAGLNTVGVRMPDHPIALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|58696928|ref|ZP_00372427.1| Sua5/YciO/YrdC/YwlC family protein [Wolbachia endosymbiont of
Drosophila simulans]
gi|225630533|ref|YP_002727324.1| Sua5/YciO/YrdC/YwlC family protein [Wolbachia sp. wRi]
gi|58536842|gb|EAL60054.1| Sua5/YciO/YrdC/YwlC family protein [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592514|gb|ACN95533.1| Sua5/YciO/YrdC/YwlC family protein [Wolbachia sp. wRi]
Length = 195
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 101/190 (53%), Gaps = 5/190 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+ I A++ ++ PT+T+Y AC+A +E++ +IY+IK R PL+I V D+ ++ +
Sbjct: 4 KIINAIQNNLLVCFPTETVYALACNALDNESIGKIYQIKKRSQNKPLSIFVSDIYNLTKI 63
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A L++ PGP+T +L ++ L +SIG+R+P+ I L+
Sbjct: 64 AKVKERYIDLINHFSPGPITYILPLKNNNILPNEF--FKDSIGIRIPEHPIAISILNKLK 121
Query: 149 SALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ TS N++G+ S D +++ + + V + L SG ST++DLT K K+L
Sbjct: 122 VPIVATSTNISGKESVCKANDIPQSIKQHLSVVIEDDELVSG-IESTIIDLTE-DKIKVL 179
Query: 208 RPGSAKEETI 217
R G+ +T+
Sbjct: 180 REGAISLQTV 189
>gi|56421910|ref|YP_149228.1| hypothetical protein GK3375 [Geobacillus kaustophilus HTA426]
gi|56381752|dbj|BAD77660.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 349
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA++ L+ G+VIA PT+T+YG DA ++ AV +I+ KGR +PL + V ++
Sbjct: 23 EAVEWLRAGEVIAFPTETVYGLGADAANTAAVEKIFAAKGRPSDNPLIVHVASMAQAEAV 82
Query: 89 AVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A + + L++ PGP+T+VL + + + + + GL ++ VR+PD +
Sbjct: 83 AASIPPMAKTLMERFWPGPLTLVLPK-RAKAVSERVTAGLPTVAVRMPDHPLALALIEAS 141
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGKFK 205
ALA SAN +G+PS + +L R A V DGG P+G STV+D + G
Sbjct: 142 GLALAAPSANRSGRPSPTTAAHVLADLDGRIAGVIDGG--PTGVGVESTVLDCSG-GVPT 198
Query: 206 ILRPGSAKEETI 217
ILRPG +E +
Sbjct: 199 ILRPGGVTKEAL 210
>gi|319406928|emb|CBI80565.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 320
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P A +A+ L+ G+++A+PT+T+YG A DA + +AV I+ K R +PL +
Sbjct: 3 ILPFNNAAINQAVAILQQGQLVALPTETVYGLAGDATNGKAVASIFSTKARPLFNPLIVH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V D+ + D L L+++ PGP+TVVL N+ GL ++ +R P
Sbjct: 63 VSDIVMAECYVKIDFLSRRLMEAFWPGPLTVVLPLKAHHNIHPLTTAGLNTLAIRSPKGG 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVS-VKDFENLWERCACVYDGGVLPSGRAGSTVVD 197
FV VI R LA SAN +G+ S S + F +L + DGG G ST++
Sbjct: 123 FVEVI-RHFGRPLAAPSANQSGKLSPTSALSVFTSLGTSVPLIIDGGDSKIGLE-STIIK 180
Query: 198 LTRLGKFKILRPGSAKEETIAILEKHSL 225
+ + +LRPG E I + K S+
Sbjct: 181 ICDENIY-LLRPGGLAIEEIEKVAKKSV 207
>gi|422729460|ref|ZP_16785861.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0012]
gi|315150061|gb|EFT94077.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0012]
Length = 340
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + + K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNVPRDT-FSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|300853437|ref|YP_003778421.1| translation factor [Clostridium ljungdahlii DSM 13528]
gi|300433552|gb|ADK13319.1| putative translation factor [Clostridium ljungdahlii DSM 13528]
Length = 350
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 110/205 (53%), Gaps = 7/205 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EEA + +K G ++A PT+T+YG +A + +AV +I+E KGR +PL + + D+ DI
Sbjct: 19 EEAGKVIKEGGLVAFPTETVYGLGANALNPDAVKKIFEAKGRPQDNPLIVHISDIEDIKE 78
Query: 88 FAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
V + L+ PGP+T++L + S + + L SIG+R+P + R + R
Sbjct: 79 LVVDVPKIAKKLMKKFWPGPMTIILPK--SQVIPDITSASLPSIGIRMPSNIIARELIRT 136
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+ +A SAN++G+PS V+ E+L + + G + G ST++D T +
Sbjct: 137 SKVPIAAPSANISGRPSPTDVERCIEDLNGKVDFILGGDMCEVG-VESTIIDCT-VNPAC 194
Query: 206 ILRPGSAKEETIAILEKHSLVEEPA 230
+LRPG E + ++ S+ +PA
Sbjct: 195 VLRPGGITLEALKEID-DSIYIDPA 218
>gi|228961589|ref|ZP_04123198.1| hypothetical protein bthur0005_50310 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|423632646|ref|ZP_17608391.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD154]
gi|228798071|gb|EEM45075.1| hypothetical protein bthur0005_50310 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|401259292|gb|EJR65468.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD154]
Length = 346
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + +++ GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMAHFWPGPLTIILPRKEG--ISENVTAGLNTVGVRMPDHPIAIALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|424757914|ref|ZP_18185642.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis R508]
gi|402406379|gb|EJV38937.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis R508]
Length = 340
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + + K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNVPRDT-FSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|422693855|ref|ZP_16751860.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX4244]
gi|315148530|gb|EFT92546.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX4244]
Length = 340
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + + K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNVPRDT-FSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|71394063|gb|AAZ32102.1| putative translation factor [uncultured euryarchaeote Alv-FOS5]
Length = 342
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 14/202 (6%)
Query: 33 ALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTD 92
A++ GK++A PT+T+YG DA ++EAV RI+E KGR +PL + + I + +
Sbjct: 25 AIREGKLVAFPTETVYGLGADALNAEAVKRIFEAKGRPQDNPLIVHIAHEEGI--YNLAR 82
Query: 93 HLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+P L+D PGP+T++L + S + GL+++ +R+P R + E
Sbjct: 83 EVPRKAKDLIDRFWPGPLTLILKK--SPIIPDRTTAGLDTVAIRMPSHPIARKLILLSER 140
Query: 150 ALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
+A SAN +G+PS + K ++L+ + + DGG G STV+DLT +LR
Sbjct: 141 PIAAPSANTSGKPSPTTGKHVIDDLYGKVEYIIDGGPTNVGLE-STVIDLTTDPPM-LLR 198
Query: 209 PGSAK----EETIAILEKHSLV 226
PG EE + ++ H V
Sbjct: 199 PGGVTLGQLEEVLGKVDVHPAV 220
>gi|45357749|ref|NP_987306.1| hypothetical protein MMP0186 [Methanococcus maripaludis S2]
gi|45047309|emb|CAF29742.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 206
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E E A + + GK+I TDTLYG + +A A+ +IY IK R P++I +G+
Sbjct: 15 EKEIETAKKMILGGKIILCGTDTLYGLSTNALDKNAIEKIYSIKERDPNKPISISLGEKK 74
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP---GLESIGVRVPDSNFV 140
I + D +++ +PGP+TV+L + K + P G + +GVR+PD++ +
Sbjct: 75 QIENYVYVDETAKKIIEKFMPGPITVILKK-------KDIIPDILGKDDVGVRIPDNDVI 127
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDFENLW-ERCACVYDGGVLPSGRAGSTVVDLT 199
R IA L TSAN++G+ + S+++ + + E+ + D G + ST+V +
Sbjct: 128 RKIAV---VPLTTTSANISGKTAPTSLEEVDQIIKEKVDLIVDTGPC-KYKVQSTIVKVI 183
Query: 200 RLGKFKILRPGSAKEETI 217
GK +++R G E I
Sbjct: 184 D-GKIELIREGKIPFEEI 200
>gi|228955573|ref|ZP_04117575.1| hypothetical protein bthur0006_49270 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228804101|gb|EEM50718.1| hypothetical protein bthur0006_49270 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 342
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 18 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 76
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 77 -GIVKEIPPVAEKLMAHFWPGPLTIILPRKE--GISEKVTAGLNTVGVRMPDHPIALALI 133
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 134 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTS-AV 191
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 192 PTILRPGGITKEQL 205
>gi|328544911|ref|YP_004305020.1| translation factor sua5 protein [Polymorphum gilvum SL003B-26A1]
gi|326414653|gb|ADZ71716.1| Probable translation factor sua5 protein [Polymorphum gilvum
SL003B-26A1]
Length = 332
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 3/187 (1%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 91
+AL G ++ VPT+T+YG A DA + A IY KGR +PL + + R V
Sbjct: 24 EALLAGNLVGVPTETVYGLAADATNGRACAAIYAAKGRPRFNPLISHLESLDAARRHGVF 83
Query: 92 DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESAL 151
D H L + PGP+T+V+ + S + + GL+++ +RVP + +R +A L
Sbjct: 84 DARAHALAQAFWPGPLTLVVPKAAGSPICDLVTAGLDTVALRVPAAPVMRFLAERTGRPL 143
Query: 152 ALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
A SANL+G+ S+ + D +L + A V D G P G ST+V L + +LRPG
Sbjct: 144 AAPSANLSGRISATTADDVIRDLGDAVAFVIDAGPCPIG-IESTIVGLAG-AEPVLLRPG 201
Query: 211 SAKEETI 217
E I
Sbjct: 202 GIAREAI 208
>gi|297531575|ref|YP_003672850.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus sp. C56-T3]
gi|375010556|ref|YP_004984189.1| sua5/YciO/YrdC/YwlC [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448239653|ref|YP_007403711.1| YwlC-like protein [Geobacillus sp. GHH01]
gi|297254827|gb|ADI28273.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus sp. C56-T3]
gi|359289405|gb|AEV21089.1| Sua5/YciO/YrdC/YwlC [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445208495|gb|AGE23960.1| YwlC-like protein [Geobacillus sp. GHH01]
Length = 355
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA++ L+ G+VIA PT+T+YG DA ++ AV +I+ KGR +PL + V ++
Sbjct: 29 EAVEWLRAGEVIAFPTETVYGLGADAANTAAVEKIFAAKGRPSDNPLIVHVASMAQAEAV 88
Query: 89 AVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A + + L++ PGP+T+VL + + + + + GL ++ VR+PD +
Sbjct: 89 AASIPPMAKTLMERFWPGPLTLVLPK-RAKAVSERVTAGLPTVAVRMPDHPLALALIEAS 147
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGKFK 205
ALA SAN +G+PS + +L R A V DGG P+G STV+D + G
Sbjct: 148 GLALAAPSANRSGRPSPTTAAHVLADLDGRIAGVIDGG--PTGVGVESTVLDCSG-GVPT 204
Query: 206 ILRPGSAKEETI 217
ILRPG +E +
Sbjct: 205 ILRPGGVTKEAL 216
>gi|199597585|ref|ZP_03211014.1| Putative translation factor (SUA5) [Lactobacillus rhamnosus HN001]
gi|199591608|gb|EDY99685.1| Putative translation factor (SUA5) [Lactobacillus rhamnosus HN001]
Length = 340
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ EA ALK G+++A PT+T+YG DA + AV+++Y KGR +PL + V D +
Sbjct: 7 ESDIPEAAAALKRGELVAFPTETVYGLGADATNVTAVSQVYAAKGRPSDNPLIVTVADAA 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
++++A L+D+ PGP+T++L+ L + GL++ R PD R +
Sbjct: 67 MVSQYATITPDAAKLMDTFWPGPLTIILNV-LPGRLSMKVTGGLQTAAFRNPDDALTRKL 125
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAG--STVVDLTR 200
+ SAN +G+PS + +L ++ A V D G R G ST++DLT
Sbjct: 126 IATAGVPIVGPSANTSGKPSPTTADHVLHDLADKIAGVLDDG---PTRVGVESTIIDLT- 181
Query: 201 LGKFKILRPGS 211
+ ILRPG+
Sbjct: 182 VTPPAILRPGA 192
>gi|299537975|ref|ZP_07051261.1| hypothetical protein BFZC1_18255 [Lysinibacillus fusiformis ZC1]
gi|424738256|ref|ZP_18166696.1| hypothetical protein C518_2808 [Lysinibacillus fusiformis ZB2]
gi|298726557|gb|EFI67146.1| hypothetical protein BFZC1_18255 [Lysinibacillus fusiformis ZC1]
gi|422947848|gb|EKU42238.1| hypothetical protein C518_2808 [Lysinibacillus fusiformis ZB2]
Length = 344
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 105/192 (54%), Gaps = 7/192 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A+ L G+V+A PT+T+YG A + AV +I+E KGR +PL + VG ++ +
Sbjct: 20 QAVDILNAGEVVAFPTETVYGLGAIATNDLAVKKIFEAKGRPSDNPLIVHVGTKEEVAIY 79
Query: 89 A--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+TD + +D PGP+T+V+ + + L KS+ GL ++G+R+PD + +
Sbjct: 80 IDHITD-IAKQCMDLFWPGPLTLVMP-AKPNVLAKSVTAGLSTVGIRMPDHPVALALLQQ 137
Query: 147 LESALALTSANLTGQPSSV-SVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
L+ LA SAN +G+PS +V ++L + DGG G STV+D+T
Sbjct: 138 LQKPLAAPSANRSGKPSPTEAVHVLDDLEGYIPYILDGGSTGIGLE-STVLDVTHEPPV- 195
Query: 206 ILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 ILRPGGITKEML 207
>gi|227519762|ref|ZP_03949811.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0104]
gi|424677531|ref|ZP_18114382.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV103]
gi|424680474|ref|ZP_18117281.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV116]
gi|424684931|ref|ZP_18121640.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV129]
gi|424687635|ref|ZP_18124271.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV25]
gi|424690943|ref|ZP_18127472.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV31]
gi|424693919|ref|ZP_18130331.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV37]
gi|424698659|ref|ZP_18134942.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV41]
gi|424701118|ref|ZP_18137294.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV62]
gi|424705495|ref|ZP_18141547.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV63]
gi|424706561|ref|ZP_18142564.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV65]
gi|424715825|ref|ZP_18145148.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV68]
gi|424719514|ref|ZP_18148661.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV72]
gi|424723752|ref|ZP_18152706.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV73]
gi|424728299|ref|ZP_18156911.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV81]
gi|424734940|ref|ZP_18163421.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV85]
gi|424751010|ref|ZP_18179065.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV93]
gi|227072850|gb|EEI10813.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0104]
gi|402354027|gb|EJU88842.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV103]
gi|402354410|gb|EJU89219.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV116]
gi|402360171|gb|EJU94779.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV129]
gi|402363314|gb|EJU97806.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV31]
gi|402363918|gb|EJU98375.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV25]
gi|402371627|gb|EJV05777.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV41]
gi|402372331|gb|EJV06452.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV62]
gi|402372527|gb|EJV06645.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV37]
gi|402379236|gb|EJV13052.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV63]
gi|402387723|gb|EJV21196.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV65]
gi|402389350|gb|EJV22748.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV68]
gi|402394314|gb|EJV27495.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV81]
gi|402396425|gb|EJV29488.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV72]
gi|402397120|gb|EJV30155.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV73]
gi|402405603|gb|EJV38193.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV85]
gi|402406073|gb|EJV38642.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis ERV93]
Length = 340
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG DA + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGADALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + + K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNVPRDT-FSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|373497981|ref|ZP_09588497.1| Sua5/YciO/YrdC/YwlC family protein [Fusobacterium sp. 12_1B]
gi|404367753|ref|ZP_10973115.1| Sua5/YciO/YrdC/YwlC family protein [Fusobacterium ulcerans ATCC
49185]
gi|371962503|gb|EHO80104.1| Sua5/YciO/YrdC/YwlC family protein [Fusobacterium sp. 12_1B]
gi|404288626|gb|EFS25679.2| Sua5/YciO/YrdC/YwlC family protein [Fusobacterium ulcerans ATCC
49185]
Length = 216
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 10/192 (5%)
Query: 25 AHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSD 84
A +E + LK G +I PTDT+YG S EA+ ++Y+ K R SPL + V DVS
Sbjct: 11 ADYDEIGRLLKDGNLIIYPTDTVYGVGGIIESDEAITKVYKAKERSFKSPLIVLVSDVSK 70
Query: 85 INRFAVTDHLPHGLLDSLL----PGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
I A + ++ L+ PG +T++L++ E N+ + G +++GVR+PD +
Sbjct: 71 IEEIAYIEEKNREKIEKLIKKFWPGGLTIILNKKE--NVPDIMVSGGKTVGVRMPDLDTA 128
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I L TSAN++G+ + S ++ E ER + DGG P G A ST++D++
Sbjct: 129 LKIIEAAGGLLPTTSANISGEATPKSYEELSEAFKERVEILVDGGKCPIGNA-STIIDMS 187
Query: 200 RLGKFKILRPGS 211
K KILR G+
Sbjct: 188 D--KPKILRTGA 197
>gi|339480541|ref|ZP_08656200.1| SUA5 family translation factor (putative) [Leuconostoc
pseudomesenteroides KCTC 3652]
Length = 337
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 103/195 (52%), Gaps = 4/195 (2%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E EA L+ G+V+A PT+T+YG DA + AV +++ KGR +PL + V D S
Sbjct: 10 EQSLAEASALLQQGEVVAFPTETVYGLGADATNEAAVQKVFTAKGRPSDNPLIMTVADES 69
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
++ F V L+ + PG +T++L + +E + GL+++ R+PD+ R +
Sbjct: 70 QLDEFVVISEAAKTLMAAFWPGSLTIILPI-KPGRVEMIVTGGLQTVAFRLPDNEAARQL 128
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
R + SAN++G+PS + + + ++ + A + D G G STV+D++
Sbjct: 129 IRVAGVPIVGPSANISGKPSPTTAQHVWHDMQGKIAGIVDDGPTTVG-VESTVIDMSATT 187
Query: 203 KFKILRPGSAKEETI 217
ILRPG+ ++ +
Sbjct: 188 P-TILRPGAVTQQQL 201
>gi|258508168|ref|YP_003170919.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus rhamnosus GG]
gi|385827840|ref|YP_005865612.1| translational factor [Lactobacillus rhamnosus GG]
gi|257148095|emb|CAR87068.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus rhamnosus GG]
gi|259649485|dbj|BAI41647.1| translational factor [Lactobacillus rhamnosus GG]
Length = 340
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ EA ALK G+++A PT+T+YG DA + AV+++Y KGR +PL + V D +
Sbjct: 7 ESDIPEAAAALKRGELVAFPTETVYGLGADATNVTAVSQVYAAKGRPSDNPLIVTVADAA 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
++++A L+D+ PGP+T++L+ L + GL++ R PD R +
Sbjct: 67 MVSQYATITPDAAKLMDTFWPGPLTIILNI-LPGRLSMKVTGGLQTAAFRNPDDALTRKL 125
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAG--STVVDLTR 200
+ SAN +G+PS + +L ++ A V D G R G ST++DLT
Sbjct: 126 IATAGVPIVGPSANTSGKPSPTTADHVLHDLADKIAGVLDDG---PTRVGVESTIIDLT- 181
Query: 201 LGKFKILRPGS 211
+ ILRPG+
Sbjct: 182 VTPPAILRPGA 192
>gi|188591315|ref|YP_001795915.1| hypothetical protein RALTA_A0528 [Cupriavidus taiwanensis LMG
19424]
gi|170938209|emb|CAP63195.1| conserved hypothetical protein, Sua5/YciO/YrdC/YwlC family;
putative double-stranded RNA binding domain [Cupriavidus
taiwanensis LMG 19424]
Length = 329
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 111/202 (54%), Gaps = 16/202 (7%)
Query: 20 RPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICV 79
R T A +EA++ L+ G+++A PT+T+YG DA + AV RI+ +KGR P+ + V
Sbjct: 4 RTPTAAELDEAVRLLEAGQLVAFPTETVYGLGADAENPAAVGRIFALKGRPSNHPVIVHV 63
Query: 80 GDVSDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPD 136
D +DI + TD +P L+D+ PGP+T++L R +++++ ++ G +SIG+R P
Sbjct: 64 VDGADIGYW--TDDVPAAAQQLIDAFWPGPLTLILKR--AAHIDAAVAGGQDSIGLRCPS 119
Query: 137 SNFVRVI----ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAG 192
+ + RG +A SAN GQ S + + + V +G + G
Sbjct: 120 HPVAQALLSRFKRG-RGGIAAPSANKFGQVSPTTAQHVREEFGDAVYVLEGDGVEVG-IE 177
Query: 193 STVVDLTRLGKF---KILRPGS 211
ST+VDL+RL + +LRPG+
Sbjct: 178 STIVDLSRLDQGIGPVLLRPGA 199
>gi|94969639|ref|YP_591687.1| translation factor SUA5 [Candidatus Koribacter versatilis Ellin345]
gi|94551689|gb|ABF41613.1| translation factor SUA5 [Candidatus Koribacter versatilis Ellin345]
Length = 215
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 10/190 (5%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
LK G V+ +PTDT YG A D + AV RIYEIK R PL++ + V A
Sbjct: 25 LKAGMVLGMPTDTFYGLAADPFNLRAVERIYEIKSRSRHKPLSLMIESVDQAEELA--QD 82
Query: 94 LP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA 150
LP + L PGP+T+++ L+ + N G +I VR+P + + +
Sbjct: 83 LPSSFYLLARRFWPGPLTMIIRAHARLPLKATANSG--NIAVRIPSAPIPLAVLKAAGLP 140
Query: 151 LALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTR-LGKFKILR 208
+ TSANL+GQ + + + + ER + DGG P ST+VDL+ G+++I+R
Sbjct: 141 ITATSANLSGQAECTTARALKQQMEERLPLIIDGGNSPRD-VHSTIVDLSSGDGQWRIIR 199
Query: 209 PGSAKEETIA 218
G+ +E I+
Sbjct: 200 EGAVSQEQIS 209
>gi|49475221|ref|YP_033262.1| hypothetical protein BH04240 [Bartonella henselae str. Houston-1]
gi|49238026|emb|CAF27233.1| hypothetical protein BH04240 [Bartonella henselae str. Houston-1]
Length = 320
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 4/200 (2%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P A +EA+ L+ G+++A+PT+T+YG A DA + A+ I+ K R +PL
Sbjct: 3 ILPFNSASVKEAVALLEQGRLVALPTETVYGLAGDATNGNAIASIFLTKRRPKFNPLIAH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + R+ D L L++ PGP+T VL N+ GL ++ VR PDS
Sbjct: 63 VSSIFMAERYVEIDFLSRHLMEVFWPGPLTFVLPLKAQHNIHPLTTSGLNTLAVRFPDSF 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F V+ + LA SAN +G S S + + +L E + DGG G ST++
Sbjct: 123 FAEVV-KCFGRPLAAPSANQSGHLSPTSAEAVWASLGESVPLILDGGFSKIGLE-STIIK 180
Query: 198 LTRLGKFKILRPGSAKEETI 217
++ + +LRPG E I
Sbjct: 181 VSDENIY-LLRPGGIAAEDI 199
>gi|418070394|ref|ZP_12707669.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus rhamnosus R0011]
gi|423080182|ref|ZP_17068813.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus rhamnosus ATCC
21052]
gi|357539814|gb|EHJ23831.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus rhamnosus R0011]
gi|357543843|gb|EHJ25856.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus rhamnosus ATCC
21052]
Length = 340
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ EA ALK G+++A PT+T+YG DA + AV+++Y KGR +PL + V D +
Sbjct: 7 ESDIPEAAAALKRGELVAFPTETVYGLGADATNVTAVSQVYAAKGRPSDNPLIVTVADAA 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
++++A L+D+ PGP+T++L+ L + GL++ R PD R +
Sbjct: 67 MVSQYATITPDAAKLMDTFWPGPLTIILNI-LPGRLSMKVTGGLQTAAFRNPDDALTRKL 125
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAG--STVVDLTR 200
+ SAN +G+PS + +L ++ A V D G R G ST++DLT
Sbjct: 126 IATAGVPIVGPSANTSGKPSPTTADHVLHDLADKIAGVLDDG---PTRVGVESTIIDLT- 181
Query: 201 LGKFKILRPGS 211
+ ILRPG+
Sbjct: 182 VTPPAILRPGA 192
>gi|374710399|ref|ZP_09714833.1| hypothetical protein SinuC_09250 [Sporolactobacillus inulinus CASD]
Length = 347
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 103/197 (52%), Gaps = 9/197 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A + L G+++A PT+T+YG A ++V +IYE KGR +PL + V ++ +
Sbjct: 23 QAAAEKLAQGEIVAFPTETVYGLGGSAKVQDSVRKIYEAKGRPSDNPLIVHVANLEQVRE 82
Query: 88 FAVTDH-LPHGLLDSLLPGPVTVVL-SRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
H + L+ + PGP+T+VL SRG SN ++ GL ++ VR+P R +
Sbjct: 83 ICTEIHPVAQKLIHAFWPGPLTLVLPSRGTVSN---AVTAGLSTVAVRMPSHPVARALIS 139
Query: 146 GLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+A SAN +G+PS + F +L R A + DGG G STVVD T
Sbjct: 140 ASNLPIAAPSANRSGRPSPTRAEHVFNDLDGRIAGILDGGETGVG-VESTVVDCTTT-PI 197
Query: 205 KILRPGS-AKEETIAIL 220
ILRPG KE+ I ++
Sbjct: 198 TILRPGGITKEQLIEVV 214
>gi|421769639|ref|ZP_16206345.1| Sua5 YciO YrdC YwlC family protein [Lactobacillus rhamnosus
LRHMDP2]
gi|421771456|ref|ZP_16208116.1| Sua5 YciO YrdC YwlC family protein [Lactobacillus rhamnosus
LRHMDP3]
gi|411184144|gb|EKS51278.1| Sua5 YciO YrdC YwlC family protein [Lactobacillus rhamnosus
LRHMDP2]
gi|411186042|gb|EKS53168.1| Sua5 YciO YrdC YwlC family protein [Lactobacillus rhamnosus
LRHMDP3]
Length = 340
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ EA ALK G+++A PT+T+YG DA + AV+++Y KGR +PL + V D +
Sbjct: 7 ESDIPEAAAALKRGELVAFPTETVYGLGADATNVTAVSQVYAAKGRPSDNPLIVTVADAA 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
++++A L+D+ PGP+T++L+ L + GL++ R PD R +
Sbjct: 67 MVSQYATITPDAAKLMDTFWPGPLTIILNI-LPGRLSMKVTGGLQTAAFRNPDDALTRKL 125
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAG--STVVDLTR 200
+ SAN +G+PS + +L ++ A V D G R G ST++DLT
Sbjct: 126 IATAGVPIVGPSANTSGKPSPTTADHVLHDLADKIAGVLDDG---PTRVGVESTIIDLT- 181
Query: 201 LGKFKILRPGS 211
+ ILRPG+
Sbjct: 182 VTPPAILRPGA 192
>gi|212224235|ref|YP_002307471.1| putative translation factor [Thermococcus onnurineus NA1]
gi|212009192|gb|ACJ16574.1| Hypothetical translation factor [Thermococcus onnurineus NA1]
Length = 339
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 9/184 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA--VTDHL 94
GK++A PT+T+YG DA + EA RI+E KGR +PL + + D D+ + A + D
Sbjct: 26 GKLVAFPTETVYGLGADALNEEAARRIFEAKGRPADNPLIVHIADFDDLKKLAREIPDEA 85
Query: 95 PHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALT 154
L + PGP+TVVL + E + GL+++ VR+P + R + +A
Sbjct: 86 -RLLAEKFWPGPLTVVLPKKE--EVPTVTTGGLDTVAVRMPAHPIALALIRA-STPIAAP 141
Query: 155 SANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAK 213
SAN++G+PS +++ ++ + + C+ DGG G STVVDL+ K +LRPG
Sbjct: 142 SANISGKPSPTLAEHVIDDFYGKIECIIDGGETKIG-VESTVVDLSG-EKPTLLRPGGLP 199
Query: 214 EETI 217
E I
Sbjct: 200 LEEI 203
>gi|75762684|ref|ZP_00742523.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228903800|ref|ZP_04067916.1| hypothetical protein bthur0014_49550 [Bacillus thuringiensis IBL
4222]
gi|434378444|ref|YP_006613088.1| sua5/yciO/yrdC/ywlC family protein [Bacillus thuringiensis HD-789]
gi|74489830|gb|EAO53207.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228855827|gb|EEN00371.1| hypothetical protein bthur0014_49550 [Bacillus thuringiensis IBL
4222]
gi|401877001|gb|AFQ29168.1| sua5/yciO/yrdC/ywlC family protein [Bacillus thuringiensis HD-789]
Length = 346
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMAHFWPGPLTIILPRKEG--ISERVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSTVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|421590248|ref|ZP_16035279.1| translation factor sua5 protein [Rhizobium sp. Pop5]
gi|403704630|gb|EJZ20451.1| translation factor sua5 protein [Rhizobium sp. Pop5]
Length = 324
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 94/188 (50%), Gaps = 4/188 (2%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+A E AL G IA+PT+T+YG A DA + A+ RIYE KGR +PL + D++
Sbjct: 12 QAALEAGCAALADGFAIAIPTETVYGLAADATNPAAITRIYETKGRPRFNPLICHMADLA 71
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
A D + L + PGP+T+VL S + GL+S+GVRVP F +
Sbjct: 72 MAEEHAEFDPVSRALATAFWPGPLTLVLPLKAQSPIHALATAGLDSVGVRVP-KGFAGAL 130
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
LA SAN +G S+ S E +L + + D G G ST+V + G
Sbjct: 131 IGAFGWPLAAPSANTSGGISATSAAHVEADLGTKIPLILDAGASTVG-VESTIVKVED-G 188
Query: 203 KFKILRPG 210
+ ++LRPG
Sbjct: 189 QLRLLRPG 196
>gi|229551969|ref|ZP_04440694.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus rhamnosus LMS2-1]
gi|385835029|ref|YP_005872803.1| SUA5 domain protein [Lactobacillus rhamnosus ATCC 8530]
gi|229314704|gb|EEN80677.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus rhamnosus LMS2-1]
gi|355394520|gb|AER63950.1| SUA5 domain protein [Lactobacillus rhamnosus ATCC 8530]
Length = 340
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ EA ALK G+++A PT+T+YG DA + AV+++Y KGR +PL + V D +
Sbjct: 7 ESDIPEAAAALKRGELVAFPTETVYGLGADATNVTAVSQVYAAKGRPSDNPLIVTVADAA 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
++++A L+D+ PGP+T++L+ L + GL++ R PD R +
Sbjct: 67 MVSQYATITPDAAKLMDTFWPGPLTIILNI-LPGRLSMKVTGGLQTAAFRNPDDALTRKL 125
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAG--STVVDLTR 200
+ SAN +G+PS + +L ++ A V D G R G ST++DLT
Sbjct: 126 IATAGVPIVGPSANTSGKPSPTTADHVLHDLADKIAGVLDDG---PTRVGVESTIIDLT- 181
Query: 201 LGKFKILRPGS 211
+ ILRPG+
Sbjct: 182 VTPPAILRPGA 192
>gi|350565581|ref|ZP_08934333.1| Sua5/YciO/YrdC/YwlC family protein [Peptoniphilus indolicus ATCC
29427]
gi|348663639|gb|EGY80200.1| Sua5/YciO/YrdC/YwlC family protein [Peptoniphilus indolicus ATCC
29427]
Length = 356
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 113/220 (51%), Gaps = 16/220 (7%)
Query: 5 LENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIY 64
+E + V+NK TE ++ + G ++ PT+T+YG D + EA+ R+Y
Sbjct: 9 METKIIKVDNKI------TENQLKDIKEVFDLGGLVVFPTETVYGLGADGLNPEALKRVY 62
Query: 65 EIKGRKHTSPLAICVGDVSDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEK 121
+ K R +PL + + + S + + +++ +++ PGP+T++++R + ++
Sbjct: 63 KAKNRPGDNPLILHIAETSQLE--GIVENISEDAKNMMEMFWPGPLTLIMNR--TKDVPN 118
Query: 122 SLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACV 180
GLE++ VR+P+ R I +A SANL+G+PS+ S + FE+L + +
Sbjct: 119 EATAGLETVAVRMPEHEIARDILSYCNKPIAAPSANLSGKPSTTSFERVFEDLNGKVEII 178
Query: 181 YDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAIL 220
DGG G STVVD T + ILRPG E + ++
Sbjct: 179 VDGGKASVG-IESTVVD-TTVNPPLILRPGKITREDLEVI 216
>gi|315230833|ref|YP_004071269.1| YrdC/Sua5 protein [Thermococcus barophilus MP]
gi|315183861|gb|ADT84046.1| putative YrdC/Sua5 protein [Thermococcus barophilus MP]
Length = 341
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 105/192 (54%), Gaps = 10/192 (5%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + ++ GK++A PT+T+YG DA + +AV RI+E KGR +PL + + + +
Sbjct: 19 AAKFIREGKLVAFPTETVYGLGADALNEKAVRRIFEAKGRPADNPLIVHIARFEQL--YE 76
Query: 90 VTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ ++P L + PGP+T+VL + N+ K+ GL+++ +R+P + +
Sbjct: 77 LARNVPREAEILAEHFWPGPLTIVLPK--KDNVPKTTTGGLDTVAIRMPAHEIALNLIKA 134
Query: 147 LESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN++G+PS +++ ++ + R C+ DGG + G STV+DLT
Sbjct: 135 SGRPIAAPSANISGKPSPTLAEHVVDDFYGRIECIIDGGEVKIG-VESTVLDLT-TKPPT 192
Query: 206 ILRPGSAKEETI 217
+LRPG E I
Sbjct: 193 LLRPGGLPLEEI 204
>gi|452973686|gb|EME73508.1| hypothetical protein BSONL12_17349 [Bacillus sonorensis L12]
Length = 347
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A Q L+ + +A PT+T+YG +A S++AV +IYE KGR +PL + + D + F
Sbjct: 23 QAAQLLQHNETVAFPTETVYGLGANAKSTDAVAKIYEAKGRPSDNPLIVHIADTEQLKEF 82
Query: 89 AVTDHLP-HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A D L++ PGP+T+VL E L + GL+++ VR+PD + +
Sbjct: 83 AKIDSAQAETLMEQFWPGPLTLVLPCKEGV-LSTRVTAGLDTVAVRMPDHPVALELIKRA 141
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGKFK 205
+A SAN++G+PS + +L R A + DGG P+G STVV T G
Sbjct: 142 GVPVAAPSANISGKPSPTKAEHVVHDLNGRIAGIVDGG--PTGVGVESTVVSCTG-GIPV 198
Query: 206 ILRPGSAKEETI 217
ILRPG +E +
Sbjct: 199 ILRPGGVTKEQL 210
>gi|423438730|ref|ZP_17415711.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG4X12-1]
gi|401115857|gb|EJQ23703.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG4X12-1]
Length = 346
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIVKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMAHFWPGPLTIILPRKE--GISEKVTAGLNTVGVRMPDHPIALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTS-AV 195
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 196 PTILRPGGITKEQL 209
>gi|197104025|ref|YP_002129402.1| Sua5/YciO/YrdC family protein [Phenylobacterium zucineum HLK1]
gi|196477445|gb|ACG76973.1| Sua5/YciO/YrdC family protein [Phenylobacterium zucineum HLK1]
Length = 307
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 95/196 (48%), Gaps = 6/196 (3%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ H A QALK G ++ +PT+T+YG A DA + AV +YE KGR +PL V DV
Sbjct: 4 TDPH--TAAQALKAGGLVLMPTETVYGLAADAANPRAVAAVYEAKGRPSFNPLISHVADV 61
Query: 83 SDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
R A D L PGP+T+VL +++ + GL+++ VR P R
Sbjct: 62 GMARRIARFDPRAEALTARFWPGPLTLVLPAADTAAVCDLARAGLDTVAVRAPAHPLARA 121
Query: 143 IARGLESALALTSANLTGQPSSVS-VKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ + + SAN +G+PS + E A DGG G STVV L L
Sbjct: 122 LLQAFGGPVVAPSANRSGRPSPTTFAAALEETGYAAAAALDGGPCEVGLE-STVVAL--L 178
Query: 202 GKFKILRPGSAKEETI 217
+ ++LRPG+ I
Sbjct: 179 DEARLLRPGAVTRAEI 194
>gi|323491653|ref|ZP_08096832.1| putative translation factor [Vibrio brasiliensis LMG 20546]
gi|323314229|gb|EGA67314.1| putative translation factor [Vibrio brasiliensis LMG 20546]
Length = 320
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 103/185 (55%), Gaps = 6/185 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A Q L +G+++A+PT+T+YG A DA + EAV +I+ KGR PL + +G+V ++
Sbjct: 15 ELAKQILASGELVAIPTETVYGLAADASNPEAVKKIFAAKGRPANHPLIVHIGNVEQLSD 74
Query: 88 FAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+A + + D+ PGPVT++L++ + + GL++IG+R+P + + +
Sbjct: 75 WARDIPQQAYTIADAFWPGPVTLLLNKAPQAT--PVVTGGLDTIGIRMPAHDVFSTLLKS 132
Query: 147 LESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
A+A SAN + S S + N L + + V DGG G ST++DLT F+
Sbjct: 133 SGMAVAAPSANPYKKLSPTSAEHVLNSLGGKISAVLDGGDCAHGLE-STIIDLTE-KPFR 190
Query: 206 ILRPG 210
ILR G
Sbjct: 191 ILRTG 195
>gi|169351563|ref|ZP_02868501.1| hypothetical protein CLOSPI_02343 [Clostridium spiroforme DSM 1552]
gi|169291785|gb|EDS73918.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium spiroforme DSM
1552]
Length = 200
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 105/193 (54%), Gaps = 11/193 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EE + + +V+A PT+T++G S EA+N +YE+K R +++ + + DI +
Sbjct: 12 EEVAKLVSDNQVVAFPTETVFGLGIKFGSYEALNSLYELKHRDRHKAISMMINNPKDIEK 71
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+A + ++ S +PG VT++L + E ++ L++IG+R+PD FV + L
Sbjct: 72 YAYVNDQARKIIKSFMPGMVTIILKKREF--IDDYFTASLDTIGIRIPDDKFVLSL---L 126
Query: 148 ESA--LALTSANLTGQPSSVSVKDFENLWE-RCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
E + +TSANL+G+ + V K ++ + + G + + ST++DL++ GK
Sbjct: 127 EKTGPMLVTSANLSGEDTLVDDKAVMKVFSGKIPLIVKGESV--SKKASTIIDLSK-GKV 183
Query: 205 KILRPGSAKEETI 217
+ILR G E+ I
Sbjct: 184 EILRVGDISEKQI 196
>gi|218779903|ref|YP_002431221.1| Sua5/YciO/YrdC/YwlC family protein [Desulfatibacillum alkenivorans
AK-01]
gi|218761287|gb|ACL03753.1| Sua5/YciO/YrdC/YwlC family protein [Desulfatibacillum alkenivorans
AK-01]
Length = 214
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
P EA +A++ LK G V+ PT LYG A A +AV ++ IKGR PL I V
Sbjct: 12 PEVEA-INQAVRILKEGGVVVFPTTGLYGLAAKASDPQAVAEVFRIKGRPDDKPLLILVD 70
Query: 81 DVSDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
+ + + +P L++ L PG +T+V S L SL G + IG+R+
Sbjct: 71 SIDQVK--PLVREVPESGRLLMEKLWPGGITLVFC--ASDLLPPSLLGGKKKIGIRMAAH 126
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKDFENL----WERCACVYDGGVLPSGRAGS 193
R + +GL + TSANL+G+P + DF L ER D G L +G AGS
Sbjct: 127 PVARALVKGLGEPITGTSANLSGEPGA---GDFRQLSLAVLERTPLALDAGKL-AGGAGS 182
Query: 194 TVVDLTRLGKFKILRPGSAKEETI 217
TVVD+T ILR G+A +E I
Sbjct: 183 TVVDVTEDPPL-ILRQGAAPKEKI 205
>gi|407771042|ref|ZP_11118405.1| Translation factor SUA5 [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407285931|gb|EKF11424.1| Translation factor SUA5 [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 331
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+RP +E +A L+ G+++A PT+T+YG DA + +AV I+ K R +PL
Sbjct: 7 IRPYSEGALTQAAAKLRAGELVAFPTETVYGLGADATNDDAVAGIFAAKQRPSFNPLISH 66
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
D + AV D L D+ PG +T+VL + SN+ + GL SI VRVP
Sbjct: 67 FPDRDAAAQHAVFDARADKLADAFWPGALTLVLPKRSDSNVSQLTTAGLPSIAVRVPAHE 126
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRA-GSTVV 196
R + R + +A SAN +G+ S + +L + DGG P G STV+
Sbjct: 127 MARALLRAVGRPIAAPSANRSGRISPTTAAHVAASLGNAIGMILDGG--PCGVGLESTVI 184
Query: 197 DLTRLGKFKILRPGSAKEETIA 218
DLT + +LRPG + +A
Sbjct: 185 DLT-TDRVVMLRPGGITRDQVA 205
>gi|359438981|ref|ZP_09228962.1| probable tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
[Pseudoalteromonas sp. BSi20311]
gi|358026367|dbj|GAA65211.1| probable tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
[Pseudoalteromonas sp. BSi20311]
Length = 335
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 104/196 (53%), Gaps = 18/196 (9%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
TE +A+ LK G+ +A+PT+T+YG A DA +S AV +I+ KGR PL + + +
Sbjct: 12 TEERINQAVALLKAGECVALPTETVYGLAADATNSGAVAKIFTAKGRPTNHPLIVHIPNQ 71
Query: 83 S-------DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVP 135
S ++N+ A+T L D+ PGP+T++L+ + NL + GL +IG+RVP
Sbjct: 72 SHLHNWAKNVNKAAIT------LADAFWPGPLTLILNAKD--NLNSPVTGGLPTIGLRVP 123
Query: 136 DSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGST 194
+ + L + LA SAN Q S +S +L R + V GG G ST
Sbjct: 124 AHPEFLAVLKQLNTGLAAPSANRYKQLSPISAAHVIRDLNGRISAVLQGGECNVG-IEST 182
Query: 195 VVDLTRLGKFKILRPG 210
+VD + + +ILRPG
Sbjct: 183 IVDASS-QQLRILRPG 197
>gi|421500105|ref|ZP_15947121.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
gi|402268963|gb|EJU18320.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Fusobacterium necrophorum
subsp. funduliforme Fnf 1007]
Length = 202
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 9/204 (4%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E +E + +K G +I PTDT+YG D S EA+ +Y+ K R +SPL V V
Sbjct: 2 EVKYKEIGEQIKKGALIIYPTDTVYGIGADMQSEEALIHLYQAKSRNFSSPLIALVDSVE 61
Query: 84 DINRFAVTD---HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
I+ A D L + PG +TV+L + + K + G ++GVR+P+
Sbjct: 62 RISEIAYIDSKKEWLEKLSKAFWPGGLTVILPAKDC--VPKIMISGGNTVGVRIPNHEMA 119
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I R L TSAN++G+ + S ++ E + ++ V DGGV P G A ST++D T
Sbjct: 120 LEIIRAAGGILPTTSANISGEATPSSYQELSEAIKQKADIVIDGGVCPVGEA-STILDFT 178
Query: 200 RLGKFKILRPGS-AKEETIAILEK 222
+ +ILR G+ KEE A++ K
Sbjct: 179 K-DSLQILRLGAITKEEIEAVIGK 201
>gi|228942472|ref|ZP_04105009.1| hypothetical protein bthur0008_51020 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228975404|ref|ZP_04135960.1| hypothetical protein bthur0003_51490 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228982041|ref|ZP_04142334.1| hypothetical protein bthur0002_51990 [Bacillus thuringiensis Bt407]
gi|384189414|ref|YP_005575310.1| SUA5 protein [Bacillus thuringiensis serovar chinensis CT-43]
gi|410677743|ref|YP_006930114.1| putative tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
[Bacillus thuringiensis Bt407]
gi|452201830|ref|YP_007481911.1| YrdC/Sua5 family protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228777705|gb|EEM25979.1| hypothetical protein bthur0002_51990 [Bacillus thuringiensis Bt407]
gi|228784386|gb|EEM32409.1| hypothetical protein bthur0003_51490 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228817214|gb|EEM63302.1| hypothetical protein bthur0008_51020 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326943123|gb|AEA19019.1| SUA5 protein [Bacillus thuringiensis serovar chinensis CT-43]
gi|409176872|gb|AFV21177.1| putative tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
[Bacillus thuringiensis Bt407]
gi|452107223|gb|AGG04163.1| YrdC/Sua5 family protein [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 346
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMAHFWPGPLTIILPRKEG--ISERVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSTVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|373855347|ref|ZP_09598093.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus sp. 1NLA3E]
gi|372454416|gb|EHP27881.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus sp. 1NLA3E]
Length = 347
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 9/193 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A + LK +VIA PT+T+YG +A +SEAV +I+ KGR +PL I + ++S + F
Sbjct: 23 QAAKFLKDNEVIAFPTETVYGLGGNAENSEAVAKIFAAKGRPSDNPLIIHIAEISQLEEF 82
Query: 89 AVTD--HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
V+D + L++ PGP+T+VL++ E L + GL ++ VR+PD + +
Sbjct: 83 -VSDVPQVAAVLMEKFWPGPLTIVLNKKE-GQLSELATAGLPTVAVRMPDHPLALALIKA 140
Query: 147 LESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGKF 204
+A SAN +G+PS + ++L + A + DGG P+G STV+D T
Sbjct: 141 SGLPIAAPSANQSGKPSPTLARHVHDDLNGKIAGIVDGG--PTGVGLESTVIDCTNEIPV 198
Query: 205 KILRPGSAKEETI 217
ILRPG +E +
Sbjct: 199 -ILRPGGITKEQL 210
>gi|154249397|ref|YP_001410222.1| Sua5/YciO/YrdC/YwlC family protein [Fervidobacterium nodosum
Rt17-B1]
gi|154153333|gb|ABS60565.1| Sua5/YciO/YrdC/YwlC family protein [Fervidobacterium nodosum
Rt17-B1]
Length = 331
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 14/186 (7%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + LK+G ++A PT+T+YG A + EAV +I+++KGR +PL + V V +I A
Sbjct: 23 ACEVLKSGGLVAFPTETVYGLGATATNPEAVKKIFQVKGRPADNPLIVHVSSVDEIENIA 82
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
++ + PGP+T VL + E N+ + GLE++GVR+P + +
Sbjct: 83 YLSEKYIDIIKKVTPGPITFVLKKKE--NIPSEVTAGLETVGVRIPAHPVAQKLI-NCSG 139
Query: 150 ALALTSANLTGQPSSVS----VKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN +G+PS ++D L E C+ D G G ST+VDLT+ F
Sbjct: 140 PIAAPSANRSGKPSPTDANAVIEDLNGLVE---CIIDAGECAFG-IESTIVDLTK--DFP 193
Query: 206 -ILRPG 210
+LRPG
Sbjct: 194 VVLRPG 199
>gi|289435803|ref|YP_003465675.1| Sua5/YciO/YrdC/YwlC family protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289172047|emb|CBH28593.1| Sua5/YciO/YrdC/YwlC family protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 345
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 104/194 (53%), Gaps = 9/194 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A + L+ G+ +A PT+T+YG DA + A+ +IYE KGR +PL + + ++
Sbjct: 19 QQAAELLRNGECVAFPTETVYGLGADATNQAAIQKIYEAKGRPSDNPLIVHIASRDQMDA 78
Query: 88 FAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
F + P L++ PGP+TV+L + S L +++ GL ++GVR+P+ +
Sbjct: 79 FVAS--YPQKAIKLMEKFWPGPLTVILPLKKDS-LASNVSAGLSTVGVRMPEHPVSLALI 135
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ +A SAN +G+PS S E+L ++ A + DGG G STV+D +
Sbjct: 136 KEAGIPVAAPSANRSGKPSPTSASHVIEDLDDKVAGIIDGGATGVGLE-STVIDCSTEIP 194
Query: 204 FKILRPGSAKEETI 217
ILRPG +E I
Sbjct: 195 V-ILRPGGITKEQI 207
>gi|332980647|ref|YP_004462088.1| translation factor SUA5 [Mahella australiensis 50-1 BON]
gi|332698325|gb|AEE95266.1| translation factor SUA5 [Mahella australiensis 50-1 BON]
Length = 350
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 109/199 (54%), Gaps = 16/199 (8%)
Query: 28 EEAIQA----LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+AI+ ++ G+V+A PT+T+YG +A + AV+RI+E KGR +PL + + D+S
Sbjct: 15 EDAIRKAAILIRKGEVVAFPTETVYGLGANALDASAVHRIFEAKGRPSDNPLIVHICDIS 74
Query: 84 DINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
+ V +H+P L++ PGP+T+++ + + E + GL+++GVR+PD
Sbjct: 75 MLEE--VVEHVPSKALLLMERFWPGPLTIIMKKHKKIPYE--VTAGLDTVGVRMPDHPIA 130
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
+ R +A SAN++G+PS + ++ R A + GG G STV+DL+
Sbjct: 131 LALIRSAGVPIAAPSANISGRPSPTKPEHVIADMQGRIAAIIAGGTCKVG-VESTVLDLS 189
Query: 200 RLGKFKIL-RPGSAKEETI 217
G +L RPG E +
Sbjct: 190 --GNNPVLYRPGGITLEML 206
>gi|218900451|ref|YP_002448862.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus G9842]
gi|228968453|ref|ZP_04129442.1| hypothetical protein bthur0004_52280 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|402563077|ref|YP_006605801.1| sua5/yciO/yrdC/ywlC family protein [Bacillus thuringiensis HD-771]
gi|423565784|ref|ZP_17542059.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus MSX-A1]
gi|218543168|gb|ACK95562.1| sua5/yciO/yrdC/ywlC family protein [Bacillus cereus G9842]
gi|228791233|gb|EEM38846.1| hypothetical protein bthur0004_52280 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|401193466|gb|EJR00472.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus MSX-A1]
gi|401791729|gb|AFQ17768.1| sua5/yciO/yrdC/ywlC family protein [Bacillus thuringiensis HD-771]
Length = 346
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMAHFWPGPLTIILPRKEG--ISERVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSTVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|423362832|ref|ZP_17340332.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD022]
gi|401077106|gb|EJP85451.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD022]
Length = 346
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMAHFWPGPLTIILPRKEG--ISERVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSTVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|418328402|ref|ZP_12939515.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
14.1.R1.SE]
gi|418632475|ref|ZP_13194906.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU128]
gi|365232001|gb|EHM73016.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
14.1.R1.SE]
gi|374832382|gb|EHR96097.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU128]
Length = 347
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H +E Q G ++A+PT+T+YG +A + EAV IY KGR +PL + + + +
Sbjct: 20 HIDEIKQTFLDGGLVAIPTETVYGLGANARNEEAVENIYVAKGRPSDNPLIVHIHSIEQL 79
Query: 86 NRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ F +H+ L+D PGP++ +L + L + GLESI VR+P R
Sbjct: 80 DDF--VEHIDDKVKVLMDEFWPGPISFILPLKQGY-LCSKVTGGLESIAVRMPSHKIGRA 136
Query: 143 IARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ + ++ +A SAN++G+PS + + +L + + +G G STV+D T+
Sbjct: 137 LLQIVDEPIAAPSANISGRPSPTTFEHVNRDLNGKVNGIVNGDQCEEGLE-STVIDCTQF 195
Query: 202 GKFKILRPGSAKEETIAILEKHSL 225
F+I RPGS ++ I HS+
Sbjct: 196 -PFRIARPGSITQDMIESRLPHSI 218
>gi|416128248|ref|ZP_11597253.1| SUA5 domain protein [Staphylococcus epidermidis FRI909]
gi|319399598|gb|EFV87853.1| SUA5 domain protein [Staphylococcus epidermidis FRI909]
Length = 347
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H +E Q G ++A+PT+T+YG +A + EAV IY KGR +PL + + + +
Sbjct: 20 HIDEIKQTFLDGGLVAIPTETVYGLGANARNEEAVENIYVAKGRPSDNPLIVHIHSIEQL 79
Query: 86 NRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ F +H+ L+D PGP++ +L + L + GLESI VR+P R
Sbjct: 80 DDF--VEHIDDKVKVLMDEFWPGPISFILPLKQGY-LCSKVTGGLESIAVRMPSHKIGRA 136
Query: 143 IARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ + ++ +A SAN++G+PS + + +L + + +G G STV+D T+
Sbjct: 137 LLQIVDEPIAAPSANISGRPSPTTFEHVNRDLNGKVNGIVNGDQCEEGLE-STVIDCTQF 195
Query: 202 GKFKILRPGSAKEETIAILEKHSL 225
F+I RPGS ++ I HS+
Sbjct: 196 -PFRIARPGSITQDMIESRLPHSI 218
>gi|350270640|ref|YP_004881948.1| dephospho-CoA kinase [Oscillibacter valericigenes Sjm18-20]
gi|348595482|dbj|BAK99442.1| dephospho-CoA kinase [Oscillibacter valericigenes Sjm18-20]
Length = 557
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 106/208 (50%), Gaps = 7/208 (3%)
Query: 5 LENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIY 64
+E + + N G R E + A + +G ++A+PT+T+YG +A EAV RI+
Sbjct: 1 METKFIDLTNIKGQQR-IVEEKIQMAADIINSGGLLAIPTETVYGLGANALDPEAVRRIF 59
Query: 65 EIKGRKHTSPLAICVGDVSDINRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSL 123
E KGR +PL I V + RF L + L + PGP+T++L R +
Sbjct: 60 EAKGRPQDNPLIIHVPSAQWLPRFCEDVPPLAYTLARNFWPGPLTIILKR--KPIIPDMT 117
Query: 124 NPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYD 182
GL+S+GVR P + + I R +A SAN +G+PS + D E++ + + D
Sbjct: 118 TAGLDSVGVRCPANAVTQAIIRYAGVPIAAPSANTSGRPSCTNAADVAEDMSGKIEGIVD 177
Query: 183 GGVLPSGRAGSTVVDLTRLGKFKILRPG 210
GG G ST+VDLT + ++LRPG
Sbjct: 178 GGPCAVG-VESTIVDLT-VTPPRLLRPG 203
>gi|294940148|ref|XP_002782688.1| sua5, putative [Perkinsus marinus ATCC 50983]
gi|239894568|gb|EER14483.1| sua5, putative [Perkinsus marinus ATCC 50983]
Length = 356
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 107/209 (51%), Gaps = 12/209 (5%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 91
+ L+ G+++A PT+T+YG +A S EAV IY+ KGR +PL + +D R + T
Sbjct: 31 ELLREGELVAFPTETVYGLGANALSDEAVAGIYQAKGRPSDNPLIVHTTCAADALRLSQT 90
Query: 92 --DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
D + L + PGP+T+VL G +S + K + GL+++G+RVP +
Sbjct: 91 PEDPIAVKLAKTFWPGPLTMVLPVGSNSGIAKRVTAGLDTVGLRVPSHPVAHAVIEAAGV 150
Query: 150 ALALTSANLTGQPSSVSV----KDFENLWE----RCACVYDGGVLPSGRAGSTVVDLTRL 201
+A SAN +G+PS +D E+ + + + DGG G STVV +
Sbjct: 151 PIAAPSANTSGKPSPTEAFHVYEDMEHNADAGRKEVSMIVDGGACDHG-VESTVVRIMDS 209
Query: 202 GKFKILRPGSAKEETI-AILEKHSLVEEP 229
ILRPG+ E + A LE ++V+ P
Sbjct: 210 SHVVILRPGAVTLEQLRACLEGMAVVDIP 238
>gi|420200806|ref|ZP_14706446.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM031]
gi|394267550|gb|EJE12137.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM031]
Length = 347
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H +E Q G ++A+PT+T+YG +A + EAV IY KGR +PL + + + +
Sbjct: 20 HIDEIKQTFLDGGLVAIPTETVYGLGANARNEEAVENIYVAKGRPSDNPLIVHIHSIEQL 79
Query: 86 NRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ F +H+ L+D PGP++ +L + L + GLESI VR+P R
Sbjct: 80 DDF--VEHIDDKVKVLMDEFWPGPISFILPLKQGY-LCSKVTGGLESIAVRMPSHKIGRA 136
Query: 143 IARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ + ++ +A SAN++G+PS + + +L + + +G G STV+D T+
Sbjct: 137 LLQIVDEPIAAPSANISGRPSPTTFEHVNRDLNGKVNGIVNGDQCEEGLE-STVIDCTQF 195
Query: 202 GKFKILRPGSAKEETIAILEKHSL 225
F+I RPGS ++ I HS+
Sbjct: 196 -PFRIARPGSITQDMIESRLPHSI 218
>gi|302875885|ref|YP_003844518.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium cellulovorans 743B]
gi|307689318|ref|ZP_07631764.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium cellulovorans 743B]
gi|302578742|gb|ADL52754.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium cellulovorans 743B]
Length = 350
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 10/203 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
E + ++ G ++A PT+T+YG +A AV +I+ KGR +PL + + + DI F
Sbjct: 20 EVAEVIRNGGLVAFPTETVYGLGANAFDENAVEKIFIAKGRPQDNPLIVHISQLDDI--F 77
Query: 89 AVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
+ +P L+D+ PGP+T +L++ + + + GLE+IG+R+P R + +
Sbjct: 78 PLVKEIPSSAKMLMDNFWPGPITFILNK--ETCIPYKTSAGLETIGIRMPSDPLARALIK 135
Query: 146 GLESALALTSANLTGQPSSVSV-KDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+ +A SANL+G+PS + + E+L + C+ G G ST+VD T +
Sbjct: 136 EVGVPIAAPSANLSGKPSPTDINRCIEDLEGKVDCIIGGSNSEVGLE-STIVDCT-VEPP 193
Query: 205 KILRPGSAKEETIAILEKHSLVE 227
+LRPG+ E I ++ + ++
Sbjct: 194 CVLRPGAITIEMIRKIQPEAYID 216
>gi|20093338|ref|NP_619413.1| SUA5/yciO/yrdC family protein [Methanosarcina acetivorans C2A]
gi|19918700|gb|AAM07893.1| SUA5/yciO/yrdC family protein [Methanosarcina acetivorans C2A]
Length = 360
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 111/204 (54%), Gaps = 15/204 (7%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+A +EA + ++ G +A PT+T+YG + EAV +I+E K R +PL++ V
Sbjct: 22 DAVLDEAAEIIRRGGTVAFPTETVYGLGANGLDPEAVRKIFEAKERPPGNPLSLLVHSGE 81
Query: 84 DINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPG-LESIGVRVPDSNF 139
D+ + V ++P L+DS PGP+T+VL E ++ + G L SIG+R+PD
Sbjct: 82 DVGK--VAKNIPEKAFRLMDSFWPGPLTIVL---EKKDIVPEITSGNLPSIGLRMPDHRI 136
Query: 140 VRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDL 198
+ + + LA SANL+G+PS S++ +L R V DGG G STVVD+
Sbjct: 137 PLELVKRAGTPLAAPSANLSGKPSPSLAAHVLADLTGRIDAVIDGGGTAIGLE-STVVDM 195
Query: 199 TRLGKFKILRPGSAKEETIAILEK 222
T + +LRPG+ IA LEK
Sbjct: 196 T-VEPPVVLRPGAV---GIAELEK 215
>gi|134046516|ref|YP_001098001.1| translation factor SUA5 [Methanococcus maripaludis C5]
gi|132664141|gb|ABO35787.1| translation factor SUA5 [Methanococcus maripaludis C5]
Length = 205
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 106/197 (53%), Gaps = 18/197 (9%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
E A + + GK+I TDTLYG + +A +A+ RIY IK R P++I +G+ I
Sbjct: 17 EIETAKKMILGGKIILCGTDTLYGLSTNALDKKAIERIYSIKERDPNKPISISLGEKKQI 76
Query: 86 NRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP---GLESIGVRVPDSNFVRV 142
+ +++ +PGP+TV+L + K + P G + +GVR+PD++ +R
Sbjct: 77 ENYVYVGETAKKIIEKFMPGPITVILKK-------KDIIPDILGKDDVGVRIPDNDVIRK 129
Query: 143 IARGLESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSG-RAGSTVVDLTR 200
IA L TSAN++G+ + +S+++ ++ + E+ + D G PS + ST+V +
Sbjct: 130 IAI---VPLTTTSANISGKTAPISLEEVDSVIKEKVDLIIDTG--PSKYKVQSTIVKVIG 184
Query: 201 LGKFKILRPGSAKEETI 217
GK +++R G E I
Sbjct: 185 -GKIELIREGKIPFEEI 200
>gi|46908713|ref|YP_015102.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes serotype
4b str. F2365]
gi|47094309|ref|ZP_00232012.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes str. 4b
H7858]
gi|226225089|ref|YP_002759196.1| yeast translation initiation protein [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|254825336|ref|ZP_05230337.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes FSL
J1-194]
gi|254853930|ref|ZP_05243278.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes FSL
R2-503]
gi|254932217|ref|ZP_05265576.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes HPB2262]
gi|254993431|ref|ZP_05275621.1| yeast translation initiation protein [Listeria monocytogenes FSL
J2-064]
gi|255519763|ref|ZP_05387000.1| yeast translation initiation protein [Listeria monocytogenes FSL
J1-175]
gi|300764959|ref|ZP_07074947.1| hypothetical protein LMHG_11591 [Listeria monocytogenes FSL N1-017]
gi|386733226|ref|YP_006206722.1| translation initiation protein [Listeria monocytogenes 07PF0776]
gi|404282099|ref|YP_006682997.1| translation factor, SUA5 type [Listeria monocytogenes SLCC2755]
gi|404287912|ref|YP_006694498.1| translation factor, SUA5 type [Listeria monocytogenes serotype 7
str. SLCC2482]
gi|405750886|ref|YP_006674352.1| translation factor, SUA5 type [Listeria monocytogenes ATCC 19117]
gi|405753749|ref|YP_006677214.1| translation factor, SUA5 type [Listeria monocytogenes SLCC2378]
gi|405756653|ref|YP_006680117.1| translation factor, SUA5 type [Listeria monocytogenes SLCC2540]
gi|406705276|ref|YP_006755630.1| translation factor, SUA5 type [Listeria monocytogenes L312]
gi|417316321|ref|ZP_12102971.1| translation initiation protein [Listeria monocytogenes J1816]
gi|417318526|ref|ZP_12105106.1| translation initiation protein [Listeria monocytogenes J1-220]
gi|424715353|ref|YP_007016068.1| Probable tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
[Listeria monocytogenes serotype 4b str. LL195]
gi|424824291|ref|ZP_18249304.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes str.
Scott A]
gi|46881985|gb|AAT05279.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes serotype
4b str. F2365]
gi|47017319|gb|EAL08149.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes str. 4b
H7858]
gi|225877551|emb|CAS06265.1| Putative yeast translation initiation protein [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258607318|gb|EEW19926.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes FSL
R2-503]
gi|293583772|gb|EFF95804.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes HPB2262]
gi|293594579|gb|EFG02340.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes FSL
J1-194]
gi|300514259|gb|EFK41318.1| hypothetical protein LMHG_11591 [Listeria monocytogenes FSL N1-017]
gi|328465145|gb|EGF36413.1| translation initiation protein [Listeria monocytogenes J1816]
gi|328471149|gb|EGF42053.1| translation initiation protein [Listeria monocytogenes J1-220]
gi|332312971|gb|EGJ26066.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes str.
Scott A]
gi|384391984|gb|AFH81054.1| translation initiation protein [Listeria monocytogenes 07PF0776]
gi|404220086|emb|CBY71450.1| translation factor, SUA5 type [Listeria monocytogenes ATCC 19117]
gi|404222949|emb|CBY74312.1| translation factor, SUA5 type [Listeria monocytogenes SLCC2378]
gi|404225853|emb|CBY77215.1| translation factor, SUA5 type [Listeria monocytogenes SLCC2540]
gi|404228734|emb|CBY50139.1| translation factor, SUA5 type [Listeria monocytogenes SLCC2755]
gi|404246841|emb|CBY05066.1| translation factor, SUA5 type [Listeria monocytogenes serotype 7
str. SLCC2482]
gi|406362306|emb|CBY68579.1| translation factor, SUA5 type [Listeria monocytogenes L312]
gi|424014537|emb|CCO65077.1| Probable tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
[Listeria monocytogenes serotype 4b str. LL195]
Length = 345
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 104/192 (54%), Gaps = 5/192 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L++G+ +A PT+T+YG DA + AV +IYE KGR +PL + + ++
Sbjct: 19 QEAAKLLRSGECVAFPTETVYGLGADATNQAAVQKIYEAKGRPSDNPLIVHIARREQMDP 78
Query: 88 FAVTDHLPH-GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
F + + L++ PGP+TV+L + S L +++ GL ++GVR+P+ +
Sbjct: 79 FVASYPVKAIQLMEKFWPGPLTVILPLKKDS-LATNVSAGLSTVGVRMPEHPVSLALIDA 137
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN +G+PS + E+L + A + DGG G STV+D + L
Sbjct: 138 ANIPVAAPSANRSGKPSPTTASHVIEDLDGKIAGIIDGGATGVGLE-STVIDCS-LDIPV 195
Query: 206 ILRPGSAKEETI 217
ILRPG +E I
Sbjct: 196 ILRPGGVTKEQI 207
>gi|418633581|ref|ZP_13195989.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU129]
gi|420191019|ref|ZP_14696956.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM037]
gi|420204942|ref|ZP_14710480.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM015]
gi|374838919|gb|EHS02452.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
VCU129]
gi|394258117|gb|EJE03009.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM037]
gi|394271663|gb|EJE16152.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
NIHLM015]
Length = 347
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H +E Q G ++A+PT+T+YG +A + EAV IY KGR +PL + + + +
Sbjct: 20 HIDEIKQTFLDGGLVAIPTETVYGLGANARNEEAVENIYVAKGRPSDNPLIVHIHSIEQL 79
Query: 86 NRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ F +H+ L+D PGP++ +L + L + GLESI VR+P R
Sbjct: 80 DDF--VEHIDDKVKVLMDEFWPGPISFILPLKQGY-LCSKVTGGLESIAVRMPSHKIGRA 136
Query: 143 IARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ + ++ +A SAN++G+PS + + +L + + +G G STV+D T+
Sbjct: 137 LLQIVDEPIAAPSANISGRPSPTTFEHVNRDLNGKVNGIVNGDQCEEGLE-STVIDCTQF 195
Query: 202 GKFKILRPGSAKEETIAILEKHSL 225
F+I RPGS ++ I HS+
Sbjct: 196 -PFRIARPGSITQDMIESRLPHSI 218
>gi|169832288|ref|YP_001718270.1| Sua5/YciO/YrdC/YwlC family protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169639132|gb|ACA60638.1| Sua5/YciO/YrdC/YwlC family protein [Candidatus Desulforudis
audaxviator MP104C]
Length = 358
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 8/188 (4%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
++ G ++A PT+T+YG +A +AV R++ +KGR +PL + VG+ ++I+ V D
Sbjct: 35 IREGGLVAFPTETVYGLGANALDRQAVKRVFAVKGRPDDNPLIVHVGERAEISGL-VRDL 93
Query: 94 LPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESAL 151
P L+ PGP+T+VL R S + ++ GL+ + VR+P + R +
Sbjct: 94 PPSAEKLIGLFWPGPLTLVLPR--SDRVSPAVTAGLDKVAVRMPAHPVALALIREAGVPV 151
Query: 152 ALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
A SAN +G+PS + E+L R V DGG +P G STV+DLT + ILRPG
Sbjct: 152 AAPSANTSGRPSPTTAAHVLEDLDGRIEAVLDGGPVPVG-VESTVLDLT-VSPPVILRPG 209
Query: 211 SAKEETIA 218
+A
Sbjct: 210 GVTGRQLA 217
>gi|390957499|ref|YP_006421256.1| translation factor SUA5 [Terriglobus roseus DSM 18391]
gi|390412417|gb|AFL87921.1| translation factor SUA5 [Terriglobus roseus DSM 18391]
Length = 213
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Query: 33 ALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAV-T 91
+L++G V+A+PTDT YG A D + AV +IYE+K R PL++ + ++S A
Sbjct: 24 SLESGMVVAMPTDTFYGLAVDPVNLRAVEQIYELKTRAKHKPLSLLIANLSHGYELARDI 83
Query: 92 DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESAL 151
D L + PGP+T+++ G L + + G ++ +RVP++ R + L +
Sbjct: 84 DTAFDRLAEKFWPGPLTIIVKAGSRLPLRVTAHTG--NVALRVPEAPIARAVVEKLGLPI 141
Query: 152 ALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGK-FKILR 208
TSANL GQP + E L +R + DGG P+ R +T+VDL+ G + ILR
Sbjct: 142 TATSANLAGQPECTHARCVREQLGDRIPLIVDGG--PTARTVPTTIVDLSGGGNSWMILR 199
Query: 209 PGSAKEETIAI 219
G+ IA+
Sbjct: 200 EGAIPTHEIAL 210
>gi|154687810|ref|YP_001422971.1| hypothetical protein RBAM_034110 [Bacillus amyloliquefaciens FZB42]
gi|154353661|gb|ABS75740.1| YwlC [Bacillus amyloliquefaciens FZB42]
Length = 346
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 16/216 (7%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ +A + L+ +V+A PT+T+YG +A ++EAV +IYE KGR +PL + + +
Sbjct: 17 TDPQITQAAELLRQNEVVAFPTETVYGLGANAENTEAVTKIYEAKGRPSDNPLIVHISHI 76
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
S ++RF H+P L+ PG +T+VL + L + GLE++ VR+PD
Sbjct: 77 SQLDRF--ISHIPETAKKLMKLFWPGALTLVLP-CKPGVLSPRVTAGLETVAVRMPDHPV 133
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDL 198
+ +A SANL+G+PS + +L R A + DGG G STV+
Sbjct: 134 ALALISSAGLPIAAPSANLSGKPSPTKAEHVAHDLNGRIAGIVDGGATGIG-VESTVLSC 192
Query: 199 TRLGKFKI-LRPGSAKEETI-----AILEKHSLVEE 228
T GK + LRPG +E I IL L EE
Sbjct: 193 T--GKQPVLLRPGGVTKEQIESAAGPILVDKGLTEE 226
>gi|311070214|ref|YP_003975137.1| ribosome maturation factor; RNA binding protein [Bacillus
atrophaeus 1942]
gi|419821413|ref|ZP_14345007.1| putative ribosome maturation factor [Bacillus atrophaeus C89]
gi|310870731|gb|ADP34206.1| putative ribosome maturation factor; RNA binding protein [Bacillus
atrophaeus 1942]
gi|388474386|gb|EIM11115.1| putative ribosome maturation factor [Bacillus atrophaeus C89]
Length = 346
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 100/191 (52%), Gaps = 5/191 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A L+ +V+A PT+T+YG +A S+EAV +IYE KGR +PL + + D+S ++R
Sbjct: 23 QAADLLRQNEVVAFPTETVYGLGANAESTEAVMKIYEAKGRPSDNPLIVHIADISQLDRI 82
Query: 89 A-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A L+ PG +T+VL + L + GLE++ VR+PD + R
Sbjct: 83 AGPASEKAKKLMKQFWPGALTLVLP-CKPGVLSPRVTAGLETVAVRMPDHPLALALIRSS 141
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+A SANL+G+PS + E +L R A + DGG G STV+ + +
Sbjct: 142 GLPIAAPSANLSGKPSPTRAEHVEHDLNGRIAGIIDGGATGLG-VESTVISCSEDMPV-L 199
Query: 207 LRPGSAKEETI 217
LRPG +E I
Sbjct: 200 LRPGGITKEQI 210
>gi|262402565|ref|ZP_06079126.1| YrdC family protein [Vibrio sp. RC586]
gi|262351347|gb|EEZ00480.1| YrdC family protein [Vibrio sp. RC586]
Length = 321
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 102/191 (53%), Gaps = 8/191 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A E A Q LK G+++A+PT+T+YG A DA EAV +I+ KGR PL + +G
Sbjct: 10 TPADIECAAQLLKQGQLVAIPTETVYGLAADATQPEAVKQIFSAKGRPANHPLIVHLGSA 69
Query: 83 SDINRFA--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
+ +A + D + L + PGP+T++L + E ++ + GLE++G+RVP +
Sbjct: 70 EQLCEWATDIADEA-YQLAQAFWPGPLTMLLPKAE--HVSPVVTGGLETVGLRVPAHPVL 126
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I + A+A SAN + S S + + L + A V DGG G ST+VDLT
Sbjct: 127 LEILKAHHLAVAAPSANPYKKLSPTSAQQVLDGLNGKLAAVLDGGECQHGLE-STIVDLT 185
Query: 200 RLGKFKILRPG 210
++LR G
Sbjct: 186 S-KPIRVLRAG 195
>gi|224543569|ref|ZP_03684108.1| hypothetical protein CATMIT_02778 [Catenibacterium mitsuokai DSM
15897]
gi|224523496|gb|EEF92601.1| Sua5/YciO/YrdC/YwlC family protein [Catenibacterium mitsuokai DSM
15897]
Length = 206
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 105/188 (55%), Gaps = 7/188 (3%)
Query: 31 IQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAV 90
+ A++ GK++A PT+T+YG AC + ++RI EIK R + + + D+ ++ +
Sbjct: 14 VSAVRDGKIVAFPTETVYGVACLFDDLKGLDRIMEIKKRNPNKAVTLMLSKKDDVKKYGL 73
Query: 91 TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA 150
D ++D +PG +T+VL R +S ++ G ++IG+R+PDS+FV +
Sbjct: 74 VDEGTQRVIDKFMPGRMTIVLKRLDS--VDSRHVSGKDTIGIRIPDSSFVLSLI-DQTGP 130
Query: 151 LALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRP 209
L++TSANL+GQ ++ + K+ L + V G + STVVDL++ G +ILR
Sbjct: 131 LSVTSANLSGQGNTTNEKEVLAQLDGQIDMVVRGQT--ASATASTVVDLSQ-GDVRILRE 187
Query: 210 GSAKEETI 217
G +E I
Sbjct: 188 GLITKEEI 195
>gi|448611122|ref|ZP_21661756.1| DNA binding protein, translation factor [Haloferax mucosum ATCC
BAA-1512]
gi|445743554|gb|ELZ95035.1| DNA binding protein, translation factor [Haloferax mucosum ATCC
BAA-1512]
Length = 202
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 103/206 (50%), Gaps = 16/206 (7%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A A++ G+V+ PT+T+YG DA + +AV R+++ KGR PL+ V +
Sbjct: 8 AADAVRHGEVVVYPTETVYGMGADATNPDAVERVFDTKGRDRDKPLSAGFPSVDAALEYV 67
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
VT L + LPGPVTVV+ R ++ L L G + +GVRVPD + ++
Sbjct: 68 VTTDLEVAFMRRFLPGPVTVVVERRDA--LPDVLVAGRDRVGVRVPDHDLACDFFERADT 125
Query: 150 ALALTSANLTG-----QPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+ TSAN +G PS +S +++ E A V DGG P STVVD G+
Sbjct: 126 PVTATSANRSGTGSITNPSQLS----DDVREAVAVVLDGGTTPGTE--STVVD---PGRG 176
Query: 205 KILRPGSAKEETIAILEKHSLVEEPA 230
I R G+ ++ L +H+ E A
Sbjct: 177 IIHRRGAMADDIETWLAEHADSEPDA 202
>gi|403068624|ref|ZP_10909956.1| hypothetical protein ONdio_03419 [Oceanobacillus sp. Ndiop]
Length = 341
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 105/195 (53%), Gaps = 12/195 (6%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A + LK GK IA PT+T+YG DA + AV +I++ KGR +PL V V + R
Sbjct: 21 EDAAERLKAGKTIAFPTETVYGLGADATNEAAVAKIFKAKGRPQDNPLIAHVATVEQLRR 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
D +P L+++ PGP+T +L + ++ G +IGVR+PD + +
Sbjct: 81 L--VDDIPVYAVQLMEAFSPGPLTYILPN--NGTCADNVTAGQTTIGVRIPDHPVAQALL 136
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRA-GSTVVDLTRLG 202
+ +A SANL+G+PS +++ + +L R + DGG P+G STV+D T+
Sbjct: 137 ERADVPVAAPSANLSGKPSPTLADHVWADLHGRIDGLLDGG--PTGVGLESTVIDCTQEI 194
Query: 203 KFKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 195 PI-ILRPGGVTKEQL 208
>gi|150399931|ref|YP_001323698.1| Sua5/YciO/YrdC/YwlC family protein [Methanococcus vannielii SB]
gi|150012634|gb|ABR55086.1| Sua5/YciO/YrdC/YwlC family protein [Methanococcus vannielii SB]
Length = 205
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E E + + G VI TDTLYG + +A A+ +IY+IK R P++I +G+
Sbjct: 15 EKEIEIVKKVVLEGGVILCGTDTLYGLSTNALDENAIEKIYKIKKRDPNKPISISLGEKY 74
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP---GLESIGVRVPDSNFV 140
+ ++ D L+D +PGP+T++L + K + P G +GVR+PD++ +
Sbjct: 75 QVEKYVYVDDTARKLIDKFMPGPITIILKK-------KDILPDILGKNDVGVRIPDNDVI 127
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLT 199
R I+ L TSAN++G+ S +++++ + + E+ + D G R ST++ +
Sbjct: 128 RKISV---VPLTTTSANISGEVSPIALEEVDPKVKEKVDLIIDSGTC-KHRMQSTIIKVI 183
Query: 200 RLGKFKILRPGSAKEETI 217
GK +++R G E I
Sbjct: 184 D-GKIELIREGKIPFEDI 200
>gi|288959229|ref|YP_003449570.1| translation factor [Azospirillum sp. B510]
gi|288911537|dbj|BAI73026.1| translation factor [Azospirillum sp. B510]
Length = 331
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 4/200 (2%)
Query: 13 ENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHT 72
E + L+ P T A + A + L+ G+++A PT+T+YG DA AV I+ KGR
Sbjct: 11 EKRPALI-PTTAAGLKRAGELLRAGRLVAFPTETVYGLGADATDDRAVAAIFAAKGRPQF 69
Query: 73 SPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGV 132
+PL + D++ + + D L PGP+T+V+ R +S L ++ GL+SI +
Sbjct: 70 NPLIAHLPDLASAQSWGLFDERALDLAAQFWPGPLTMVVPRPANSALSLLVSAGLDSIAI 129
Query: 133 RVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA 191
RVP + I R +A SAN +G S + E+L ER + GG G
Sbjct: 130 RVPGHPVAQAILRAAGKPIAAPSANRSGAVSPTTPHHVLESLGERVDAIVTGGKCMVGLE 189
Query: 192 GSTVVDLTRLGKFKILRPGS 211
STV+DLT + +LRPG+
Sbjct: 190 -STVIDLTG-PEAVLLRPGA 207
>gi|347534611|ref|YP_004841281.1| hypothetical protein LSA_09490 [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504667|gb|AEN99349.1| Uncharacterized protein ywlC [Lactobacillus sanfranciscensis TMW
1.1304]
Length = 339
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 105/192 (54%), Gaps = 5/192 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A +K G +++ PT+T+YG DA + +AV ++Y+ KGR +PL + V DV + +
Sbjct: 12 DQAAAEIKRGNLVSFPTETVYGLGADATNVDAVEKVYKAKGRPSDNPLIVHVADVKTVEK 71
Query: 88 FAVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+A+ D L+ + PGP+T++L + + + L K + GL++ R PD + +
Sbjct: 72 YALPLDEKTKKLIKAFWPGPLTIIL-KLKPNALSKKVTGGLDTAAFRNPDKQATIDLIKT 130
Query: 147 LESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
E L SAN +G+PS +++ + +L + A + D G G STV+D++
Sbjct: 131 AEVPLVGPSANTSGKPSPTLAEHVYHDLHGKIAGILDAGATEVG-VESTVIDMSTKTP-A 188
Query: 206 ILRPGSAKEETI 217
ILRPG+ + I
Sbjct: 189 ILRPGAVTQAKI 200
>gi|374366694|ref|ZP_09624770.1| translation factor SUA5 [Cupriavidus basilensis OR16]
gi|373101827|gb|EHP42872.1| translation factor SUA5 [Cupriavidus basilensis OR16]
Length = 328
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 16/211 (7%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
+ R T A ++A+Q L+ G+++A PT+T+YG DA + EA+ RIY KGR P+ +
Sbjct: 1 MSRMPTSAELDQAVQLLEAGELVAFPTETVYGLGADAENPEAIARIYAAKGRPSNHPIIV 60
Query: 78 CVGDVSDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRV 134
V D DI+ + D +P L+D+ PGP+T++L R ++++ ++ G +SIG+R
Sbjct: 61 HVVDGGDISYW--VDDVPPAAQDLIDAFWPGPLTLILKR--AAHIPAAVAGGQDSIGLRC 116
Query: 135 PDSNFVRVI----ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGR 190
P + + RG +A SAN GQ S + + + + V +G + G
Sbjct: 117 PSHPVAQALLGRFKRG-RGGIAAPSANKFGQVSPTTAQHVRDEFGDSVFVLEGDDVEVG- 174
Query: 191 AGSTVVDLTRLGKF---KILRPGSAKEETIA 218
ST+VDL+RL + +LRPG+ +A
Sbjct: 175 IESTIVDLSRLEQGIGPVLLRPGAITPAMMA 205
>gi|289191931|ref|YP_003457872.1| Sua5/YciO/YrdC/YwlC family protein [Methanocaldococcus sp.
FS406-22]
gi|288938381|gb|ADC69136.1| Sua5/YciO/YrdC/YwlC family protein [Methanocaldococcus sp.
FS406-22]
Length = 216
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 86/153 (56%), Gaps = 14/153 (9%)
Query: 36 TGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLP 95
GK+I TDTLYG + +A +AV ++YEIK R + PL+ICV D S+I ++A + L
Sbjct: 31 NGKIIICGTDTLYGISANALDEKAVKKVYEIKRRDFSKPLSICVKDKSEIEKYAYVNDLA 90
Query: 96 HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGL---ESIGVRVPDSNFVRVIARGLESALA 152
++D LPG +T++L + K + P + + +G+R+PD +R ++ L
Sbjct: 91 KKIIDKFLPGALTIILKK-------KPVIPDIVAKDYVGIRIPDEPIIRELSI---VPLT 140
Query: 153 LTSANLTGQPSSVSVKDF-ENLWERCACVYDGG 184
TSAN++G+ S SV + E + + V D G
Sbjct: 141 TTSANISGKESPTSVNEIDEEILKNVDYVVDIG 173
>gi|240103997|ref|YP_002960306.1| Translation factor , Sua5/YciO/YrdC/YwlC family [Thermococcus
gammatolerans EJ3]
gi|239911551|gb|ACS34442.1| Translation factor, putative, Sua5/YciO/YrdC/YwlC family
[Thermococcus gammatolerans EJ3]
Length = 343
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 101/193 (52%), Gaps = 12/193 (6%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + + GK++A PT+T+YG DA + AV RI+E KGR +PL I + + + F
Sbjct: 18 AARLIVEGKLVAFPTETVYGLGADALNERAVRRIFEAKGRPADNPLIIHIAESEWL--FE 75
Query: 90 VTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ +P L + PGP+T+VL +GE + GL+++ VR+P + R
Sbjct: 76 LAREVPEVALRLAERFWPGPLTLVLPKGE--KVPSVTTGGLDTVAVRMPAHPIALELIRL 133
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN++G+PS ++ + R C+ DGG P G STV+DLT G+
Sbjct: 134 SGRPIAAPSANISGKPSPTEADHVVDDFYGRIECIIDGGPTPIG-VESTVLDLT--GEVP 190
Query: 206 I-LRPGSAKEETI 217
+ LRPG E I
Sbjct: 191 VLLRPGGLPLEDI 203
>gi|384267230|ref|YP_005422937.1| hypothetical protein BANAU_3600 [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387900342|ref|YP_006330638.1| putative translation factor [Bacillus amyloliquefaciens Y2]
gi|380500583|emb|CCG51621.1| putative protein ywlC [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|387174453|gb|AFJ63914.1| putative translation factor [Bacillus amyloliquefaciens Y2]
Length = 346
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 106/200 (53%), Gaps = 11/200 (5%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ +A + L+ +V+A PT+T+YG +A ++EAV +IYE KGR +PL + + +
Sbjct: 17 TDPQITQAAELLRHNEVVAFPTETVYGLGANAENTEAVTKIYEAKGRPSDNPLIVHISHI 76
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
S ++RF H+P L++ PG +T+VL + L + GLE++ VR+PD
Sbjct: 77 SQLDRF--ISHIPETAKKLMELFWPGALTLVLP-CKPGVLSPRVTAGLETVAVRMPDHPV 133
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDL 198
+ +A SANL+G+PS + +L R A + DGG G STV+
Sbjct: 134 ALALISSAGLPIAAPSANLSGKPSPTKAEHVAHDLNGRIAGIVDGGATGIG-VESTVLSC 192
Query: 199 TRLGKFKI-LRPGSAKEETI 217
T GK + LRPG +E I
Sbjct: 193 T--GKQPVLLRPGGVTKEQI 210
>gi|15668233|ref|NP_247026.1| hypothetical protein MJ_0062 [Methanocaldococcus jannaschii DSM
2661]
gi|2500922|sp|Q60369.1|Y062_METJA RecName: Full=Uncharacterized protein MJ0062
gi|1498824|gb|AAB98044.1| hypothetical protein MJ_0062 [Methanocaldococcus jannaschii DSM
2661]
Length = 207
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 99/184 (53%), Gaps = 24/184 (13%)
Query: 12 VENKAGLVRPATEAHAEEAIQALK----TGKVIAVPTDTLYGFACDACSSEAVNRIYEIK 67
++NK + E ++ ++ LK GK++ TDTLYG + +A + +AV ++Y IK
Sbjct: 3 LKNKIIKIYELNEEERKKVLEFLKKEILNGKIVICGTDTLYGISANALNEKAVRKVYNIK 62
Query: 68 GRKHTSPLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGL 127
R+ PL+ICV D ++I ++A + L ++D LPGP+T++L + PG+
Sbjct: 63 RREFNKPLSICVRDKNEIEKYAYVNDLAKKIIDKFLPGPLTIILKK----------KPGI 112
Query: 128 ------ESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFEN-LWERCACV 180
+ IG+R+PD +R ++ L TSAN++G+ S +V + + + ++ V
Sbjct: 113 PDIVAKDYIGIRIPDEPIIRELSI---VPLTTTSANISGKESPTTVDEIDKEVLKKVDYV 169
Query: 181 YDGG 184
D G
Sbjct: 170 IDIG 173
>gi|375364135|ref|YP_005132174.1| hypothetical protein BACAU_3445 [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|421729900|ref|ZP_16169029.1| putative protein ywlC [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|451345147|ref|YP_007443778.1| hypothetical protein KSO_001970 [Bacillus amyloliquefaciens IT-45]
gi|371570129|emb|CCF06979.1| putative protein ywlC [Bacillus amyloliquefaciens subsp. plantarum
CAU B946]
gi|407075866|gb|EKE48850.1| putative protein ywlC [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|449848905|gb|AGF25897.1| hypothetical protein KSO_001970 [Bacillus amyloliquefaciens IT-45]
Length = 346
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 106/200 (53%), Gaps = 11/200 (5%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ +A + L+ +V+A PT+T+YG +A ++EAV +IYE KGR +PL + + +
Sbjct: 17 TDPQITQAAELLRQNEVVAFPTETVYGLGANAENTEAVTKIYEAKGRPSDNPLIVHISHI 76
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
S ++RF H+P L++ PG +T+VL + L + GLE++ VR+PD
Sbjct: 77 SQLDRF--ISHIPETAKKLMELFWPGALTLVLP-CKPGVLSPRVTAGLETVAVRMPDHPA 133
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDL 198
+ +A SANL+G+PS + +L R A + DGG G STV+
Sbjct: 134 ALALISSAGLPIAAPSANLSGKPSPTKAEHVAHDLNGRIAGIVDGGATGIG-VESTVLSC 192
Query: 199 TRLGKFKI-LRPGSAKEETI 217
T GK + LRPG +E I
Sbjct: 193 T--GKQPVLLRPGGVTKEQI 210
>gi|419841517|ref|ZP_14364886.1| Sua5/YciO/YrdC/YwlC family protein [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
gi|386905043|gb|EIJ69824.1| Sua5/YciO/YrdC/YwlC family protein [Fusobacterium necrophorum
subsp. funduliforme ATCC 51357]
Length = 202
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E +E + +K G +I PTDT+YG A S EA+ +Y+ K R +SPL V V
Sbjct: 2 EVKYKEIGEQIKKGALIIYPTDTVYGIAASMQSEEALIHLYQAKSRNFSSPLIALVDSVE 61
Query: 84 DINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
I+ A D+ L + PG +TV+L + + K + G ++GVR+P+
Sbjct: 62 RISEIAYIDNKKEELETLSKAFWPGGLTVILPAKDC--VPKIMISGGNTVGVRIPNHKMA 119
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I R L TSAN++G+ + S ++ E + ++ V DGGV P G A ST++D T
Sbjct: 120 LEIIRAAGGILPTTSANISGEATPSSYQELSEAIKQKADIVIDGGVCPVGEA-STILDFT 178
Query: 200 RLGKFKILRPGS-AKEETIAILEK 222
+ +ILR G+ KEE A++ K
Sbjct: 179 K-DSLQILRLGAITKEEIEAVIGK 201
>gi|169826582|ref|YP_001696740.1| hypothetical protein Bsph_0998 [Lysinibacillus sphaericus C3-41]
gi|168991070|gb|ACA38610.1| Hypothetical ywlC protein [Lysinibacillus sphaericus C3-41]
Length = 344
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 5/191 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI-NR 87
+A+ L G+V+A PT+T+YG A + AV +I+E KGR +PL + VG ++ N
Sbjct: 20 QAVDILNAGEVVAFPTETVYGLGAVATNDTAVKKIFEAKGRPSDNPLIVHVGTKEEVTNY 79
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ +D PGP+T+V+ + + L +S+ GL ++G+R+PD + + L
Sbjct: 80 IEHISEIAKQCIDLFWPGPLTLVMP-AKPNVLAQSVTAGLSTVGIRMPDHPVALALLQQL 138
Query: 148 ESALALTSANLTGQPSSV-SVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ LA SAN +G+PS ++ ++L + DGG G STV+D+T I
Sbjct: 139 QKPLAAPSANRSGKPSPTEAIHVLDDLGGYIPYILDGGSTGIGLE-STVLDVTHEPPV-I 196
Query: 207 LRPGSAKEETI 217
LRPG +E +
Sbjct: 197 LRPGGITKEIL 207
>gi|115380236|ref|ZP_01467257.1| Sua5/YciO/YrdC/YwlC family protein [Stigmatella aurantiaca DW4/3-1]
gi|310821629|ref|YP_003953987.1| sua5/ycio/yrdc/ywlc family protein [Stigmatella aurantiaca DW4/3-1]
gi|115362760|gb|EAU61974.1| Sua5/YciO/YrdC/YwlC family protein [Stigmatella aurantiaca DW4/3-1]
gi|309394701|gb|ADO72160.1| Sua5/YciO/YrdC/YwlC family protein [Stigmatella aurantiaca DW4/3-1]
Length = 203
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 10/191 (5%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H A++ L G ++A PTDT YG CD S +A+ R+Y++KGR PL+ D+SD+
Sbjct: 17 HVSRAVEVLSRGGLVAYPTDTYYGLGCDLASKKAIERLYQLKGRDKKKPLSFLCPDLSDV 76
Query: 86 NRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLE-SIGVRVPDSNFVRVIA 144
++A + + + L PG T +L E++ + + + +G+RVPD+ R +A
Sbjct: 77 AKYAHVSNFAYRTMKGLTPGAFTFIL---EATRIVPDMMMSRQKQVGIRVPDAPLARALA 133
Query: 145 RGLESALALTSA-NLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
GL L TSA + G+P + +D E L + DGGV + STVV L
Sbjct: 134 AGLGRPLVTTSASDEEGEP-LIDARDIKERLGHGLDLILDGGV--TLIEPSTVVSLIG-D 189
Query: 203 KFKILRPGSAK 213
+ILR G +
Sbjct: 190 SIEILRQGKGQ 200
>gi|242371607|ref|ZP_04817181.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
M23864:W1]
gi|242350674|gb|EES42275.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus epidermidis
M23864:W1]
Length = 347
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAV-TDHLP 95
G ++A+PT+T+YG +A AV +IYE KGR +PL + V +++F D
Sbjct: 31 GGLVAIPTETVYGLGANAKDEVAVKKIYEAKGRPSDNPLIVHVHHRKQLDKFVEHIDERV 90
Query: 96 HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTS 155
L+++ PGP++ +L +S L +++ GL SI VR+P R + + ++ +A S
Sbjct: 91 SKLMEAFWPGPISFILPL-KSGYLCETVTGGLNSIAVRMPSHKIGRALLQVIDEPIAAPS 149
Query: 156 ANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKE 214
ANL+G+PS + F +L + + +G G STV+D T+ F+I RPGS +
Sbjct: 150 ANLSGRPSPTTFDHVFHDLNHKIDGIVNGDQSEEGLE-STVLDCTQF-PFRIARPGSVTK 207
Query: 215 ETI 217
E I
Sbjct: 208 EMI 210
>gi|228911164|ref|ZP_04074970.1| hypothetical protein bthur0013_53040 [Bacillus thuringiensis IBL
200]
gi|228848527|gb|EEM93375.1| hypothetical protein bthur0013_53040 [Bacillus thuringiensis IBL
200]
Length = 346
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVKEIPPVAEKLMAHFWPGPLTIILPRKEG--ISERVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSPVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|295094170|emb|CBK83261.1| Sua5/YciO/YrdC/YwlC family protein [Coprococcus sp. ART55/1]
Length = 350
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 107/193 (55%), Gaps = 8/193 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A + LK G ++A PT+T+YG DA + +A +RIY KGR +PL + + + S +
Sbjct: 17 EQAAEILKRGGLVAFPTETVYGLGGDALNPDASHRIYAAKGRPSDNPLIVHIAETSSVYE 76
Query: 88 FA--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
A V+D L+++ PGP+T++L++ E + + GL+++ +R+P + +
Sbjct: 77 LAETVSDDTKK-LMEAFWPGPLTIILNKKEV--VPHTTTGGLDTVAIRMPSHPVAMRLIK 133
Query: 146 GLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+A SANL+G+PS + + +++ R + DGG + G ST+VD+T +
Sbjct: 134 DSGVYIAAPSANLSGRPSPTTAQHVQQDMDGRIDMIIDGGAVGIG-IESTIVDMTG-DRP 191
Query: 205 KILRPGSAKEETI 217
ILRPG E I
Sbjct: 192 TILRPGYITPEMI 204
>gi|126653458|ref|ZP_01725554.1| hypothetical protein BB14905_19345 [Bacillus sp. B14905]
gi|126589814|gb|EAZ83947.1| hypothetical protein BB14905_19345 [Bacillus sp. B14905]
Length = 344
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 102/191 (53%), Gaps = 5/191 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI-NR 87
+A+ L G+V+A PT+T+YG A + AV +I+E KGR +PL + VG ++ N
Sbjct: 20 QAVDILNAGEVVAFPTETVYGLGAVATNDVAVKKIFEAKGRPSDNPLIVHVGTKEEVTNY 79
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ +D PGP+T+V+ + + L +S+ GL ++G+R+PD + + L
Sbjct: 80 IEHISEIAKQCMDLFWPGPLTLVMP-AKPNVLAQSVTAGLSTVGIRMPDHPVALALLQQL 138
Query: 148 ESALALTSANLTGQPSSV-SVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ LA SAN +G+PS ++ ++L + DGG G STV+D+T I
Sbjct: 139 QKPLAAPSANRSGKPSPTEAIHVLDDLGGYIPYILDGGSTGIGLE-STVLDVTHEPPV-I 196
Query: 207 LRPGSAKEETI 217
LRPG +E +
Sbjct: 197 LRPGGITKEML 207
>gi|339006940|ref|ZP_08639515.1| putative tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
[Brevibacillus laterosporus LMG 15441]
gi|338776149|gb|EGP35677.1| putative tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
[Brevibacillus laterosporus LMG 15441]
Length = 359
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 109/197 (55%), Gaps = 10/197 (5%)
Query: 25 AHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSD 84
AH +A + +++G+++A PT+T+YG +A S EAV +I+ KGR +PL + +G+ S
Sbjct: 23 AHLVDAAKLVESGELVAFPTETVYGLGANALSDEAVEKIFVAKGRPSDNPLIVHIGEKSQ 82
Query: 85 INRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
++ A TD +P L+++ PGP+T+ L + + + + GL ++GVR+PD
Sbjct: 83 LDTVA-TD-IPVKARQLMEAFWPGPLTMFLPK--KAGIASKVTAGLSTVGVRMPDHPVAL 138
Query: 142 VIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
+ + +A SAN +G+PS + + E+L R + + DGG G ST +D+T
Sbjct: 139 ELIKQAHVPIAAPSANRSGRPSPTTAQHVLEDLAGRISGIVDGGSTGVG-VESTTIDMT- 196
Query: 201 LGKFKILRPGSAKEETI 217
+ I RPG E I
Sbjct: 197 VEPPMIHRPGGITVEQI 213
>gi|406927366|gb|EKD63407.1| hypothetical protein ACD_51C00281G0004 [uncultured bacterium]
Length = 184
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 8/187 (4%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+ + ++ ++ L+ G V+ PTDT YG ACD + +AV+R+YE+K PL+I VG +
Sbjct: 2 DINLDKIVEVLRNGGVVTHPTDTCYGLACDIFNQKAVDRLYELKQMPKNKPLSIIVGSLE 61
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ ++ V + L PG +T+VLSR +S + LN G+++IG+R+P +
Sbjct: 62 EARKYGVFNDKALELAKKGWPGDLTLVLSR--TSEVPTYLNNGIDTIGIRIPSDELTLEM 119
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ L+ TSANL+ + S KD + V D GV+P + ST+V + G
Sbjct: 120 LKRWGGPLSTTSANLSKGSNPYSSKDA----LKGDVVIDVGVIPCKKP-STIVSVVD-GG 173
Query: 204 FKILRPG 210
+LR G
Sbjct: 174 ISVLRQG 180
>gi|319408205|emb|CBI81858.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 320
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 4/200 (2%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P A +EA++ LK G+++A+PT+T+YG A DA + +AV I+ K R +PL +
Sbjct: 3 ILPLNSASIKEAVEVLKQGQLVALPTETVYGLAGDATNGKAVASIFTTKKRPQFNPLIVH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + + D L +++ PGP+T+VL + N+ GL+++ VR P
Sbjct: 63 VSSIVMAEHYVEIDLLSRRFMEAFWPGPLTLVLPLKVNHNIHPLTTSGLDTLAVRFPVGG 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F V+ + LA SAN +G S S F +L + DGGV G ST++
Sbjct: 123 FAEVV-QHFGRPLAAPSANQSGGLSPTSAASVFASLGASVPLIIDGGVSKIGLE-STIIK 180
Query: 198 LTRLGKFKILRPGSAKEETI 217
+ + +LRPG E I
Sbjct: 181 VCDKNIY-LLRPGGVTAEEI 199
>gi|394991241|ref|ZP_10384048.1| YwlC [Bacillus sp. 916]
gi|429506989|ref|YP_007188173.1| hypothetical protein B938_17505 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|393808013|gb|EJD69325.1| YwlC [Bacillus sp. 916]
gi|429488579|gb|AFZ92503.1| hypothetical protein B938_17505 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 346
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 11/200 (5%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ +A + L+ +V+A PT+T+YG +A ++EAV +IYE KGR +PL + + +
Sbjct: 17 TDPQITQAAELLRQNEVVAFPTETVYGLGANAENTEAVTKIYEAKGRPSDNPLIVHISHI 76
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
S ++RF H+P L+ PG +T+VL + L + GLE++ VR+PD
Sbjct: 77 SQLDRF--ISHIPETAKKLMKLFWPGALTLVLP-CKPGVLSPRVTAGLETVAVRMPDHPV 133
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDL 198
+ +A SANL+G+PS + +L R A + DGG G STV+
Sbjct: 134 ALALISSAGLPIAAPSANLSGKPSPTKAEHVAHDLNGRIAGIVDGGATGIG-VESTVLSC 192
Query: 199 TRLGKFKI-LRPGSAKEETI 217
T GK + LRPG +E I
Sbjct: 193 T--GKQPVLLRPGGVTKEQI 210
>gi|421873348|ref|ZP_16304962.1| putative uncharacterized protein PH0435 [Brevibacillus laterosporus
GI-9]
gi|372457674|emb|CCF14511.1| putative uncharacterized protein PH0435 [Brevibacillus laterosporus
GI-9]
Length = 359
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 109/197 (55%), Gaps = 10/197 (5%)
Query: 25 AHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSD 84
AH +A + +++G+++A PT+T+YG +A S EAV +I+ KGR +PL + +G+ S
Sbjct: 23 AHLVDAAKLVESGELVAFPTETVYGLGANALSDEAVEKIFVAKGRPSDNPLIVHIGEKSQ 82
Query: 85 INRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
++ A TD +P L+++ PGP+T+ L + + + + GL ++GVR+PD
Sbjct: 83 LDTVA-TD-IPVKARQLMEAFWPGPLTMFLPK--KAGIASKVTAGLSTVGVRMPDHPVAL 138
Query: 142 VIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
+ + +A SAN +G+PS + + E+L R + + DGG G ST +D+T
Sbjct: 139 ELIKQAHVPIAAPSANRSGRPSPTTAQHVLEDLAGRISGIVDGGSTGVG-VESTTIDMT- 196
Query: 201 LGKFKILRPGSAKEETI 217
+ I RPG E I
Sbjct: 197 VEPPMIHRPGGITVEQI 213
>gi|125975078|ref|YP_001038988.1| translation factor SUA5 [Clostridium thermocellum ATCC 27405]
gi|281418504|ref|ZP_06249523.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium thermocellum JW20]
gi|125715303|gb|ABN53795.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium thermocellum ATCC
27405]
gi|281407588|gb|EFB37847.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium thermocellum JW20]
Length = 351
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 15/210 (7%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + L+ G ++A PT+T+YG DA AV +I+E KGR +PL + + D+ +
Sbjct: 21 AAEVLRGGGLVAFPTETVYGLGADALDENAVKKIFEAKGRPSDNPLIVHIAGKEDV--YG 78
Query: 90 VTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ ++P L+D PGP+T+VL + S + + GL ++G+R P + R
Sbjct: 79 LAANVPPKAQILMDRFWPGPLTLVLEK--SDKIPSVITAGLSTVGLRAPSHPIALALIRE 136
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SANL+G+PS K ++L+ R + DGG G STV+D+T
Sbjct: 137 AGIPIAAPSANLSGRPSPTVPKHVIDDLYGRVDVIIDGGNANIG-VESTVLDVTADVPV- 194
Query: 206 ILRPGSAKEETIAILEKH-----SLVEEPA 230
ILRPG E + + K+ SL+++PA
Sbjct: 195 ILRPGGVSFEQLKDVLKNVTMDPSLMKKPA 224
>gi|452857319|ref|YP_007499002.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452081579|emb|CCP23349.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 346
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 11/200 (5%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ +A + L+ +V+A PT+T+YG +A ++EAV +IYE KGR +PL + + +
Sbjct: 17 TDPQITQAAELLRQNEVVAFPTETVYGLGANAENTEAVTKIYEAKGRPSDNPLIVHISHI 76
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
S ++RF H+P L+ PG +T+VL + L + GLE++ VR+PD
Sbjct: 77 SQLDRF--ISHIPETAKKLMKLFWPGALTLVLP-CKPGVLSPRVTAGLETVAVRMPDHPV 133
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDL 198
+ +A SANL+G+PS + +L R A + DGG G STV+
Sbjct: 134 ALALISSAGLPIAAPSANLSGKPSPTKAEHVAHDLNGRIAGIVDGGATGIG-VESTVLSC 192
Query: 199 TRLGKFKI-LRPGSAKEETI 217
T GK + LRPG +E I
Sbjct: 193 T--GKQPVLLRPGGVTKEQI 210
>gi|419719442|ref|ZP_14246721.1| Sua5/YciO/YrdC/YwlC family protein [Lachnoanaerobaculum saburreum
F0468]
gi|383304355|gb|EIC95761.1| Sua5/YciO/YrdC/YwlC family protein [Lachnoanaerobaculum saburreum
F0468]
Length = 366
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 108/194 (55%), Gaps = 9/194 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A +K+G ++A PT+T+YG DA EA +IY KGR +PL + + ++ +++ A
Sbjct: 33 AADIIKSGGLVAFPTETVYGLGADAFMEEAAKKIYAAKGRPSDNPLIVHISEIREVDDIA 92
Query: 90 -VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
+ + L PGP+TVVL + + + + + GL+++ VR+PD+N R I +
Sbjct: 93 ECIPDIFYSLAKKYWPGPMTVVLKK--RNIVPDATSGGLDTVAVRLPDNNIARAIIKESG 150
Query: 149 SALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A SAN +G+PS + ++ E++ + + DGG + G ST++DLT +L
Sbjct: 151 VPIAAPSANTSGRPSPTKAIHVLEDMNGKIDMIIDGGTVGIG-VESTIIDLTS-DIPTLL 208
Query: 208 RPGSAKEETIAILE 221
RPG+ T+ +LE
Sbjct: 209 RPGAV---TLEMLE 219
>gi|150020136|ref|YP_001305490.1| Sua5/YciO/YrdC/YwlC family protein [Thermosipho melanesiensis
BI429]
gi|149792657|gb|ABR30105.1| Sua5/YciO/YrdC/YwlC family protein [Thermosipho melanesiensis
BI429]
Length = 335
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 13/199 (6%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 91
+ +K+G ++A PT+T+YG A + EAV++I+++KGR +PL + V V +
Sbjct: 21 KVIKSGGLVAFPTETVYGLGASASNGEAVDKIFKVKGRAKDNPLIVHVAFVDTLYEIGEV 80
Query: 92 DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESAL 151
+ +++ + PGP+T V+ + ++ K++ L ++GVR+P R + +
Sbjct: 81 NEKYRKVIEQITPGPITFVIRK--KASFPKNVTASLNTVGVRIPAHPVARKLCE-YAGPI 137
Query: 152 ALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK-ILRP 209
A SANL+G+PS E+L+ + C+ D G P G ST++DL+ G ILRP
Sbjct: 138 AAPSANLSGKPSPTDASAVIEDLFGKIECIIDAGNTPFG-IESTIIDLS--GDIPIILRP 194
Query: 210 GSAKEETIAILEKHSLVEE 228
G I I + H L E
Sbjct: 195 GP-----ITIEKLHELFGE 208
>gi|448492245|ref|ZP_21608839.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum californiensis DSM
19288]
gi|445691704|gb|ELZ43888.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum californiensis DSM
19288]
Length = 208
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 6/162 (3%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G ++ PT+T+YG DA + AV R +E+KGR ++PL++ V V D R+ L
Sbjct: 25 GDLVVYPTETVYGLGADALHAAAVERAFELKGRDRSNPLSLGVASVDDALRYTRPTELAV 84
Query: 97 GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSA 156
+ LPGPVTVV+ RG+ + +L G + +G+RVPD + R + L TSA
Sbjct: 85 AFARAFLPGPVTVVVERGD--RVPDALTAGRDRVGIRVPDHDLARALL-AETGPLTATSA 141
Query: 157 NLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVD 197
N++G S + D ++ + + V DGG P STVVD
Sbjct: 142 NVSGTGSVTNPADLDDRIRDGVDAVIDGGETPGTE--STVVD 181
>gi|385266604|ref|ZP_10044691.1| ribosome maturation factor [Bacillus sp. 5B6]
gi|385151100|gb|EIF15037.1| ribosome maturation factor [Bacillus sp. 5B6]
Length = 346
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 11/200 (5%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ +A + L+ +V+A PT+T+YG +A ++EAV +IYE KGR +PL + + +
Sbjct: 17 TDPQITQAAELLRQNEVVAFPTETVYGLGANAENTEAVTKIYEAKGRPSDNPLIVHISHI 76
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
S ++RF H+P L+ PG +T+VL + L + GLE++ VR+PD
Sbjct: 77 SQLDRF--ISHIPETAKKLMKLFWPGALTLVLP-CKPGVLSPRVTAGLETVAVRMPDHPV 133
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDL 198
+ +A SANL+G+PS + +L R A + DGG G STV+
Sbjct: 134 ALALISSAGLPIAAPSANLSGKPSPTKAEHVAHDLNGRIAGIVDGGATGIG-VESTVLSC 192
Query: 199 TRLGKFKI-LRPGSAKEETI 217
T GK + LRPG +E I
Sbjct: 193 T--GKQPVLLRPGGVTKEQI 210
>gi|366163502|ref|ZP_09463257.1| translation factor SUA5 [Acetivibrio cellulolyticus CD2]
Length = 351
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 10/192 (5%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A Q LK G ++A PT+T+YG +A + EAV RI+ KGR +PL + V D + +
Sbjct: 21 ASQVLKDGGLVAFPTETVYGLGANALNKEAVERIFIAKGRPSDNPLIVHVADKRSVEKL- 79
Query: 90 VTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
H+P+ L+D PGP+T+V+ + + + + GL+++ +RVP + R
Sbjct: 80 -VSHIPNKASILMDKFWPGPLTLVMDK--LPIIPEVITAGLDTVAIRVPSHPIALALIRE 136
Query: 147 LESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
E +A SAN++G+PS + N L + + DGG G STVVD+ L
Sbjct: 137 AELPVAAPSANVSGKPSPTDSRHVINDLNGKVDVIIDGGFSDIG-VESTVVDMV-LDPPM 194
Query: 206 ILRPGSAKEETI 217
+LRPG E +
Sbjct: 195 LLRPGGITVEQL 206
>gi|384411247|ref|YP_005620612.1| Sua5/YciO/YrdC/YwlC family protein [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|335931621|gb|AEH62161.1| Sua5/YciO/YrdC/YwlC family protein [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 329
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 3/202 (1%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++ P E+A+Q ++ G + +PT+T+YG A DA S EAV RIY+ KGR +PL +
Sbjct: 11 IILPCDSKGIEKAVQLIRGGYPVGLPTETVYGLAADAFSGEAVARIYQAKGRPSFNPLIV 70
Query: 78 CVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
+ + + L PG +T+VL + + + + GL+++ +R+P
Sbjct: 71 HIAHIEQAAEIVEFNDEALSLAQKFWPGALTMVLPLKKDAKIASIVTAGLDTVAIRMPSH 130
Query: 138 NFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVV 196
+R + + LA SAN +G S + ++ E+L + A V DGG+ G ST++
Sbjct: 131 PVMRQVIKAFGHPLAAPSANKSGSISPTTALHVKESLNGKIAAVLDGGIADKGLE-STII 189
Query: 197 DLTRLGKFKILRPGSAKEETIA 218
+ + K+LRPG E +A
Sbjct: 190 YIGA-DEIKLLRPGPITSEELA 210
>gi|308071165|ref|YP_003872770.1| hypothetical protein PPE_04472 [Paenibacillus polymyxa E681]
gi|305860444|gb|ADM72232.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
Length = 415
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 120/234 (51%), Gaps = 21/234 (8%)
Query: 7 NGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEI 66
+G VS E R A E EA L+ G+ +A PT+T+YG DA S++AV ++
Sbjct: 57 DGGVSDEIWDEQTRIAAEKGIREASVLLQAGETVAFPTETVYGLGADARSTKAVEAVFVA 116
Query: 67 KGRKHTSPLAICVGD-------VSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNL 119
KGR +PL + + D VS+IN A L++ PGP+T+VL + L
Sbjct: 117 KGRPSDNPLIVHISDADQLEGMVSEINDTA------RELMNMFWPGPLTLVLPVVPQA-L 169
Query: 120 EKSLNPGLESIGVRVPDSNF-VRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERC 177
+ GL+++GVR+PD +R+IA LA SAN +G+PS + E+L R
Sbjct: 170 SSRVTAGLDTVGVRMPDHPIALRLIAEA-GCPLAAPSANRSGRPSPTLARHVREDLEGRI 228
Query: 178 ACVYDGGVLPSGRA-GSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVEEPA 230
+ DGG P+G STVV G ILRPG E +A + + ++V +PA
Sbjct: 229 GGILDGG--PTGVGLESTVVQAGDDGTVTILRPGGVTAEQLATVAR-AVVLDPA 279
>gi|170017814|ref|YP_001728733.1| putative translation factor (SUA5) [Leuconostoc citreum KM20]
gi|414596163|ref|ZP_11445739.1| Putative translation factor (SUA5) [Leuconostoc citreum LBAE E16]
gi|169804671|gb|ACA83289.1| Putative translation factor (SUA5) [Leuconostoc citreum KM20]
gi|390483096|emb|CCF27800.1| Putative translation factor (SUA5) [Leuconostoc citreum LBAE E16]
Length = 336
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
LK G+V+A PT+T+YG DA EAV +++ KGR +PL + V D + F
Sbjct: 19 LKAGEVVAFPTETVYGLGADATHEEAVQKVFVAKGRPADNPLIMTVADAEQLTNFVSVSE 78
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+D+ PG +T++L + + + GL++ R+PD+ R I R +
Sbjct: 79 AAKALIDAFWPGSLTIILPI-KPGQVSMMVTGGLDTAAFRLPDNETTRAIIREAGVPIVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSA 212
SAN +G+PS + + + ++ + A + D G G STVVD+ ILRPG+
Sbjct: 138 PSANTSGKPSPTTAQHVWHDMQGKIAAIVDDGPTQVG-VESTVVDMAA-DVPTILRPGAV 195
Query: 213 KEETI 217
++ +
Sbjct: 196 TQQQL 200
>gi|256368861|ref|YP_003106367.1| Sua5/YciO/YrdC family protein [Brucella microti CCM 4915]
gi|255999019|gb|ACU47418.1| Sua5/YciO/YrdC family protein [Brucella microti CCM 4915]
Length = 323
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 9/198 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL + V ++ R+
Sbjct: 14 RAVEVLRRGGLVAIPTETVYGLAADAANGEGVAGIFAAKGRPQFNPLIVHVDGIAMAGRY 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVIA 144
D + L ++ PGP+T+VL E + E+ ++P GL ++ VR+P VR +
Sbjct: 74 VAFDPVSRRLAEAFWPGPLTIVLPLKERQDTERPIHPLVTAGLSTLAVRMPHGR-VRDVI 132
Query: 145 RGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
L+S +A SAN +G+ S S +L R + D G P G + + +
Sbjct: 133 TALDSPVAAPSANTSGRISPTSAAAVAGDLGGRIDLILDAG--PCGVGVESTIVKVDGDQ 190
Query: 204 FKILRPGS-AKEETIAIL 220
+LRPG A EE A L
Sbjct: 191 VHLLRPGGLAAEEIEAFL 208
>gi|238922539|ref|YP_002936052.1| putative translation factor (SUA5) [Eubacterium rectale ATCC 33656]
gi|238874211|gb|ACR73918.1| putative translation factor (SUA5) [Eubacterium rectale ATCC 33656]
Length = 502
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 102/187 (54%), Gaps = 10/187 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + G+++A PT+T+YG DA EA +IY KGR +PL + + D SD+ R
Sbjct: 19 QEAGDLIAAGELVAFPTETVYGLGGDALDPEASKKIYSAKGRPSDNPLIVHISDFSDLER 78
Query: 88 FAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
A T +P L D+ PGP+T+++ +G++ + + G++++ VR+P+ +
Sbjct: 79 IAKT--VPEDARKLSDAFWPGPLTMIVEKGDA--VPYATTGGMDTVAVRMPNHPIALDLI 134
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
R +A SAN +G+PS E+L + A + DGG + G ST++DLT
Sbjct: 135 RRSGCLIAAPSANTSGRPSPTEAAHVAEDLSGKIAMIIDGGPVGIG-IESTIIDLTEDTP 193
Query: 204 FKILRPG 210
+LRPG
Sbjct: 194 M-VLRPG 199
>gi|421879411|ref|ZP_16310879.1| Putative translation factor (SUA5) [Leuconostoc citreum LBAE C11]
gi|390446702|emb|CCF26999.1| Putative translation factor (SUA5) [Leuconostoc citreum LBAE C11]
Length = 335
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 8/187 (4%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
LK G+V+A PT+T+YG DA EAV +++ KGR +PL + V D + F
Sbjct: 18 LKAGEVVAFPTETVYGLGADATHEEAVQKVFVAKGRPADNPLIMTVADAEQLTNFVSVSE 77
Query: 94 LPHGLLDSLLPGPVTVVL--SRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESAL 151
L+D+ PG +T++L G+ S + + GL++ R+PD+ R I R +
Sbjct: 78 AAKALIDAFWPGSLTIILPIKPGQVSMM---VTGGLDTAAFRLPDNETTRAIIREAGVPI 134
Query: 152 ALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
SAN +G+PS + + + ++ + A + D G G STVVD+ ILRPG
Sbjct: 135 VGPSANTSGKPSPTTAQHVWHDMQGKIAAIVDDGPTQVG-VESTVVDMAA-DVPTILRPG 192
Query: 211 SAKEETI 217
+ ++ +
Sbjct: 193 AVTQQQL 199
>gi|421876009|ref|ZP_16307569.1| Putative translation factor (SUA5) [Leuconostoc citreum LBAE C10]
gi|372558044|emb|CCF23689.1| Putative translation factor (SUA5) [Leuconostoc citreum LBAE C10]
Length = 336
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
LK G+V+A PT+T+YG DA EAV +++ KGR +PL + V D + F
Sbjct: 19 LKAGEVVAFPTETVYGLGADATYEEAVQKVFVAKGRPADNPLIMTVADAEQLTNFVSVSE 78
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+D+ PG +T++L + + + GL++ R+PD+ R I R +
Sbjct: 79 AAKALIDAFWPGSLTIILPI-KPGQVSMMVTGGLDTAAFRLPDNETTRAIIREAGVPIVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSA 212
SAN +G+PS + + + ++ + A + D G G STVVD+ ILRPG+
Sbjct: 138 PSANTSGKPSPTTAQHVWHDMQGKIAAIVDDGPTQVG-VESTVVDMAA-DVPTILRPGAV 195
Query: 213 KEETI 217
++ +
Sbjct: 196 TQQQL 200
>gi|336435789|ref|ZP_08615503.1| hypothetical protein HMPREF0988_01088 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336000284|gb|EGN30436.1| hypothetical protein HMPREF0988_01088 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 498
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 10/209 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + LK G ++A PT+T+YG +A EA + Y KGR +PL + + +V +NR
Sbjct: 9 QEAGEILKKGGLVAFPTETVYGLGANALDEEAARKTYAAKGRPSDNPLIVHICEVDALNR 68
Query: 88 FAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
AV ++P L + PGP+T++L + S + GL+++ VR+P + R +
Sbjct: 69 IAV--NIPEEVGRLAEKFWPGPLTLILEK--SDEVPYGTTGGLDTVAVRMPSDSIARELI 124
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
R ++ SAN +G+PS + + E+L + + DGG + G ST++D+T +
Sbjct: 125 RAAGGYVSAPSANTSGRPSPTAAEHVREDLDGKIEMILDGGSVDIGLE-STILDMT-VTP 182
Query: 204 FKILRPGSAKEETIAILEKHSLVEEPAAG 232
ILRPG+ + + + H ++E G
Sbjct: 183 PMILRPGAITADMMEPVVGHVSIDETLLG 211
>gi|90425777|ref|YP_534147.1| Sua5/YciO/YrdC/YwlC [Rhodopseudomonas palustris BisB18]
gi|90107791|gb|ABD89828.1| translation factor SUA5 [Rhodopseudomonas palustris BisB18]
Length = 327
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 4/211 (1%)
Query: 22 ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
A E +A++ L+ G ++A PT+T+YG CDA ++ A+ R+Y+ KGR +PL V D
Sbjct: 12 AGEDGVAKAVKCLRDGGLVAFPTETVYGLGCDAGNAAAIARLYQAKGRPSFNPLIAHVAD 71
Query: 82 VSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
++ R D L S PGP+T+V+ + E + GL+++ +RVP +
Sbjct: 72 LAAAERIGRFDGDARRLAASFWPGPLTLVVPKAEHCPVADLATAGLDTVAIRVPLHPVAQ 131
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTR 200
I RG A+ SAN +G S + +L R + +GG + G ST+V
Sbjct: 132 AILRGFGGAVVAPSANRSGHVSPTTAAHVHVDLDGRIQLIVNGGPVSVG-VESTIVAC-- 188
Query: 201 LGKFKILRPGSAKEETIAILEKHSLVEEPAA 231
+ +LRPG E I + +L + AA
Sbjct: 189 FDQPVLLRPGGLPREKIEAVLGRALAQPVAA 219
>gi|294495411|ref|YP_003541904.1| Sua5/YciO/YrdC/YwlC family protein [Methanohalophilus mahii DSM
5219]
gi|292666410|gb|ADE36259.1| Sua5/YciO/YrdC/YwlC family protein [Methanohalophilus mahii DSM
5219]
Length = 355
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 112/211 (53%), Gaps = 13/211 (6%)
Query: 12 VENKAGLVRPATEAHAE---EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKG 68
++ K ++R A E + +A + L+ GK +A PT+T+YG DA + +AV +I++ KG
Sbjct: 7 MQKKTEIMRIAEETAEDIFKKAGKLLREGKTVAFPTETVYGLGADALNPQAVEQIFKAKG 66
Query: 69 RKHTSPLAICVGDVSDINRFAVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPG- 126
R +PL + V + N+ +T L L + PGP+T++L E ++ + G
Sbjct: 67 RPADNPLIVHVSNQEQCNQLVITFTPLAEKLAECFWPGPLTIIL---EKTDRVPYITTGR 123
Query: 127 LESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGV 185
LE++ +R+P + R I +A SAN++G+PS + E+L R + DGG
Sbjct: 124 LETVAIRMPANQIARKIIEAACKPIAAPSANISGRPSPTTASHVEEDLQGRIDAIVDGGE 183
Query: 186 LPSGRAGSTVVDLTRLGKFKILRPG--SAKE 214
+ G STVVD R ILRPG SAK+
Sbjct: 184 VEIG-VESTVVDARREVPV-ILRPGKISAKD 212
>gi|15896136|ref|NP_349485.1| translation factor [Clostridium acetobutylicum ATCC 824]
gi|337738090|ref|YP_004637537.1| translation factor (SUA5) [Clostridium acetobutylicum DSM 1731]
gi|384459601|ref|YP_005672021.1| translation factor [Clostridium acetobutylicum EA 2018]
gi|15025929|gb|AAK80825.1|AE007785_10 Predicted translation factor (SUA5) [Clostridium acetobutylicum
ATCC 824]
gi|325510290|gb|ADZ21926.1| translation factor (SUA5) [Clostridium acetobutylicum EA 2018]
gi|336292179|gb|AEI33313.1| translation factor (SUA5) [Clostridium acetobutylicum DSM 1731]
Length = 350
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 110/207 (53%), Gaps = 8/207 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E +EA + +K GK++ PT+T+YG +A EA +I+E KGR +PL I + D
Sbjct: 15 EQILKEAGEFIKNGKLVVFPTETVYGLGANAEDGEATKKIFEAKGRPQDNPLIIHISDFE 74
Query: 84 DINRFA--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
D+++ ++D L+ PGP+T+++ + S + + GL S+GVR+P R
Sbjct: 75 DVDKVVRNISDS-ARKLMREFWPGPMTLIMEK--KSIISDVTSAGLTSVGVRMPSDKIAR 131
Query: 142 VIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
+ + ++A SANL+G+PS V+ E+L + + G G STV+D T
Sbjct: 132 KLIKFSGVSIAAPSANLSGKPSPTDVERCIEDLNGKVDYIIGGNKCEYGLE-STVIDCT- 189
Query: 201 LGKFKILRPGSAKEETIAILEKHSLVE 227
+ ILRPG+ E + +++ + ++
Sbjct: 190 VNPVCILRPGAITLEMVRKVDEKAYID 216
>gi|291526824|emb|CBK92410.1| Sua5/YciO/YrdC/YwlC family protein [Eubacterium rectale M104/1]
Length = 502
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 102/187 (54%), Gaps = 10/187 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + G+++A PT+T+YG DA EA +IY KGR +PL + + D SD+ R
Sbjct: 19 QEAGDLIAAGELVAFPTETVYGLGGDALDPEASKKIYSAKGRPSDNPLIVHISDFSDLER 78
Query: 88 FAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
A T +P L D+ PGP+T+++ +G++ + + G++++ VR+P+ +
Sbjct: 79 IAKT--VPEDARKLSDAFWPGPLTMIVEKGDA--VPYATTGGMDTVAVRMPNHPIALDLI 134
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
R +A SAN +G+PS E+L + A + DGG + G ST++DLT
Sbjct: 135 RRSGCLIAAPSANTSGRPSPTEAAHVAEDLSGKIAMIIDGGPVGIG-IESTIIDLTEDTP 193
Query: 204 FKILRPG 210
+LRPG
Sbjct: 194 M-VLRPG 199
>gi|291526379|emb|CBK91966.1| Sua5/YciO/YrdC/YwlC family protein [Eubacterium rectale DSM 17629]
Length = 502
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 10/206 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + G+++A PT+T+YG DA EA +IY KGR +PL + + D SD+ R
Sbjct: 19 QEAGDLIAAGELVAFPTETVYGLGGDALDPEASKKIYSAKGRPSDNPLIVHISDFSDLER 78
Query: 88 FAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
A T +P L D+ PGP+T+++ +G++ + + G++++ VR+P+ +
Sbjct: 79 IAKT--VPEDARKLSDAFWPGPLTMIVEKGDA--VPYATTGGMDTVAVRMPNHPIALDLI 134
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
R +A SAN +G+PS E+L + A + DGG + G ST++DLT
Sbjct: 135 RRSGCLIAAPSANTSGRPSPTEAAHVAEDLSGKIAMIIDGGPVGIG-IESTIIDLTEDTP 193
Query: 204 FKILRPGSAKEETIAILEKHSLVEEP 229
+LRPG + ++ + +V +P
Sbjct: 194 M-VLRPGYITPQMLSKVLGKEVVIDP 218
>gi|260752549|ref|YP_003225442.1| Sua5/YciO/YrdC/YwlC family protein [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|258551912|gb|ACV74858.1| Sua5/YciO/YrdC/YwlC family protein [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 329
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 3/202 (1%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++ P E+A+Q ++ G + +PT+T+YG A DA S EAV RIY+ KGR +PL +
Sbjct: 11 IILPCDSKGIEKAVQLIRGGYPVGLPTETVYGLAADAFSGEAVARIYQAKGRPSFNPLIV 70
Query: 78 CVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
+ + + L PG +T+VL + + + + GL+++ +R+P
Sbjct: 71 HIAHIEQAAEIVEFNDEALSLAQKFWPGALTMVLPLKKDAKIASIVTAGLDTVAIRMPSH 130
Query: 138 NFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVV 196
+R + + LA SAN +G S + ++ E+L + A V DGG+ G ST++
Sbjct: 131 PVMRQVIKAFGHPLAAPSANKSGSISPTTALHVKESLNGKIAAVLDGGIADKGLE-STII 189
Query: 197 DLTRLGKFKILRPGSAKEETIA 218
+ K+LRPG E +A
Sbjct: 190 -YVGADEIKLLRPGPITSEELA 210
>gi|299821849|ref|ZP_07053737.1| Sua5/YciO/YrdC/YwlC family protein [Listeria grayi DSM 20601]
gi|299817514|gb|EFI84750.1| Sua5/YciO/YrdC/YwlC family protein [Listeria grayi DSM 20601]
Length = 343
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 107/198 (54%), Gaps = 13/198 (6%)
Query: 28 EEAIQA----LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
EE QA LK G+ IA PT+T+YG DA + AV++IY KGR +PL + + +
Sbjct: 15 EEIYQAATDLLKAGECIAFPTETVYGLGADATNEAAVDKIYTAKGRPSDNPLIVHIAHLE 74
Query: 84 DINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
+ VTD +P L+ PGP+T++L ++ +L K++ GL+S+G+R+P++
Sbjct: 75 QLESL-VTD-VPDKAKELIKHFWPGPLTIILPL-KAGSLAKNVTAGLQSVGIRMPENEVA 131
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLT 199
LA SAN +G+PS + + E+L + A + DGG G STV+D T
Sbjct: 132 HDFLAYSGLPLAAPSANSSGRPSPTTAQHVQEDLTGKIAGIIDGGDTGVGLE-STVIDCT 190
Query: 200 RLGKFKILRPGSAKEETI 217
+ ILRPG +E I
Sbjct: 191 -VPIPAILRPGGVTQEEI 207
>gi|410613429|ref|ZP_11324488.1| YrdC family protein [Glaciecola psychrophila 170]
gi|410167091|dbj|GAC38377.1| YrdC family protein [Glaciecola psychrophila 170]
Length = 316
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 105/192 (54%), Gaps = 6/192 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A+ L+ G+ +A+PT+T+YG A DA AVN+I+E KGR PL + + D+S + +
Sbjct: 2 KQAVSLLQKGECVALPTETVYGLAADASDINAVNKIFEAKGRPKNHPLIVHIPDISHLEK 61
Query: 88 FA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+A + + L + PGP++++L + E E + GL++I +RVP + R
Sbjct: 62 WAKAIPNTAYDLANLFWPGPLSLLLKKAEHVPYE--ITGGLDTIVLRVPAHPLFLDVLRK 119
Query: 147 LESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
L + LA SAN S +++ + + L R A V +GG G ST++DL K +
Sbjct: 120 LNTGLAAPSANRYKHLSPTITKQVMQGLDGRIAAVLEGGACEHG-LESTILDLVS-EKPR 177
Query: 206 ILRPGSAKEETI 217
ILR G ++ +
Sbjct: 178 ILRAGPVTQQQL 189
>gi|254780760|ref|YP_003065173.1| hypothetical protein CLIBASIA_03235 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040437|gb|ACT57233.1| hypothetical protein CLIBASIA_03235 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 330
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 4/192 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+A + L G IA+PT+T+YG A D+ + A+ R+YEIK R +PL V D+S + +
Sbjct: 13 RKACEFLDAGLPIAIPTETVYGLAVDSRNPTAIRRLYEIKKRPAMNPLICHVSDISMVKK 72
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A D L L PGP+T+VL ++++ L++ RVP F + +
Sbjct: 73 HASVDPLSLHLAKLFWPGPLTLVLDLLSTTDIHPLSTANLKTACFRVP-CGFTKKLIETY 131
Query: 148 ESALALTSANLTGQPSSVSVKDF--ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
LA+ SAN +GQ S +VK ++ + + DGG+ G ST+V++ K +
Sbjct: 132 GHPLAIPSANRSGQISITNVKHILSSSICKEIPLIIDGGISKIG-LESTIVNVQCEKKVR 190
Query: 206 ILRPGSAKEETI 217
ILRPG + ET+
Sbjct: 191 ILRPGGLEIETL 202
>gi|406838189|ref|ZP_11097783.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus vini DSM 20605]
Length = 343
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 12/207 (5%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
++A LK G++IA PT+T+YG DA + +AV R+Y KGR +PL + V V +
Sbjct: 11 QVDQAADELKKGELIAFPTETVYGLGADATNEQAVKRVYLAKGRPSDNPLIVTVSSVKMV 70
Query: 86 NRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
++A+ H L+ PGP+T++ + + +L K++ GL++ R+P + R +
Sbjct: 71 EKYAIEISPAAHKLIKHFWPGPLTLIF-KIKPESLPKAVTGGLKTAAFRMPANTVTRKLI 129
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDL-TRLG 202
+ SAN +G+PS + F +L R A + D G G ST++DL T++
Sbjct: 130 ELAGVPIVGPSANSSGKPSPTTAAHVFHDLEGRIAGIVDDGSTKVG-VESTIIDLSTKVP 188
Query: 203 KFKILRPGSAKEETIAILEKHSLVEEP 229
+LRPG+ E E + ++EP
Sbjct: 189 --TVLRPGAVTAE-----ELENFLQEP 208
>gi|389572371|ref|ZP_10162456.1| ywlC [Bacillus sp. M 2-6]
gi|388427952|gb|EIL85752.1| ywlC [Bacillus sp. M 2-6]
Length = 350
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 9/194 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A L+ +V+A PT+T+YG +A +EAV +IYE KGR +PL + + DV ++
Sbjct: 23 EQAALLLRQNEVVAFPTETVYGLGANAKETEAVKKIYEAKGRPSDNPLIVHIADVQQLHE 82
Query: 88 FA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
FA + + L+D+ PG +T+VL + L K + GL ++GVR+PD + R
Sbjct: 83 FAQIENEKVTALMDAFWPGALTIVLP-CKPGTLSKQVTAGLTTVGVRMPDHPVALELIRA 141
Query: 147 LESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTV--VDLTRLGK 203
+A SAN +G+PS +++ +L + A + DGG G + V VD +
Sbjct: 142 AGLPIAAPSANRSGKPSPTLADHVASDLDGKIAGIVDGGSTGIGVESTVVSCVDEIPV-- 199
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 200 --ILRPGGITKEAL 211
>gi|308175423|ref|YP_003922128.1| ribosome maturation factor [Bacillus amyloliquefaciens DSM 7]
gi|307608287|emb|CBI44658.1| putative ribosome maturation factor; RNA binding protein [Bacillus
amyloliquefaciens DSM 7]
Length = 346
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 11/200 (5%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ +A + L+ +V+A PT+T+YG +A ++EAV +IYE KGR +PL + + D+
Sbjct: 17 TDPQITQAAELLRQNEVVAFPTETVYGLGANAENTEAVTKIYEAKGRPSDNPLIVHISDI 76
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
++RF H+P L+ PG +T+VL + L + GLE++ VR+PD
Sbjct: 77 GQLDRF--ISHIPETAKKLMKLFWPGALTLVLP-CKPGVLSPRVTAGLETVAVRMPDHPV 133
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDL 198
+ +A SANL+G+PS + +L R A + DGG G STV L
Sbjct: 134 ALALISSAGLPIAAPSANLSGKPSPTKAEHVAHDLNGRIAGIVDGGATGIG-VESTV--L 190
Query: 199 TRLGKFKI-LRPGSAKEETI 217
+ GK + LRPG +E I
Sbjct: 191 SCAGKQPVLLRPGGVTKEQI 210
>gi|340755294|ref|ZP_08691986.1| Sua5/YciO/YrdC/YwlC family protein [Fusobacterium sp. D12]
gi|313687537|gb|EFS24372.1| Sua5/YciO/YrdC/YwlC family protein [Fusobacterium sp. D12]
Length = 202
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E +E + +K G +I PTDT+YG A S EA+ +Y+ K R +SPL V V
Sbjct: 2 EVKYKEIGEQVKKGALIIYPTDTVYGIAASMQSEEALIHLYQAKSRNFSSPLIALVDSVE 61
Query: 84 DINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
I+ A D+ L + PG +TV+L + + K + G ++GVR+P+
Sbjct: 62 RISEIAYIDNKKEELETLSKAFWPGGLTVILPAKDC--VPKIMISGGNTVGVRIPNHKMA 119
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I R L TSAN++G+ + S ++ E + ++ V DGGV P G A ST++D T
Sbjct: 120 LEIIRAAGGILPTTSANISGEATPSSYQELSEAIKQKADIVIDGGVCPVGEA-STILDFT 178
Query: 200 RLGKFKILRPGS-AKEETIAILEK 222
+ +ILR G+ KEE A++ K
Sbjct: 179 K-DSLQILRLGAITKEEIEAVIGK 201
>gi|73662077|ref|YP_300858.1| translation factor [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494592|dbj|BAE17913.1| putative translation factor [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 347
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 13/190 (6%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
+ G +IA+PT+T+YG DA + A+ IY KGR +PL + + V I F TD
Sbjct: 28 FENGGLIAIPTETVYGLGADARNEAAIKHIYSAKGRPSDNPLIVHIYKVEQIQAF--TDK 85
Query: 94 LP---HGLLDSLLPGPVTVV--LSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
L L++ PGP++ + L +G L +S++ GL+SI VR+P R I + ++
Sbjct: 86 LSKEVEMLMNEFWPGPISFIVPLKKGY---LCESVSGGLDSIAVRMPSHPIGRQILKYVD 142
Query: 149 SALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A SANL+G+PS + + + +L R + +G G STV+D TR FKI
Sbjct: 143 MPIAAPSANLSGRPSPTTFEHVYRDLDGRIDGIVNGDQSEEGLE-STVLDCTRF-PFKIA 200
Query: 208 RPGSAKEETI 217
RPGS + I
Sbjct: 201 RPGSITKSMI 210
>gi|451817458|ref|YP_007453659.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451783437|gb|AGF54405.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 349
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 17/194 (8%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E EA + +K G ++ PT+T+YG DA + +AV +++ KGR +PL I V
Sbjct: 15 EKKIVEAAEIIKNGGIVVFPTETVYGLGADALNEKAVEKVFMAKGRPQDNPLIIHVAS-K 73
Query: 84 DINRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPG-----LESIGVRVPDS 137
++ +A + L+D PGP+TV+L + K + PG L+SIG+R+PD
Sbjct: 74 NVELYAKEVPEVAKQLIDKFWPGPLTVILKK-------KDIIPGVTSANLDSIGIRMPDD 126
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVV 196
R + + +A SAN++G+PS + E+L E+ C+ GG + ST+V
Sbjct: 127 EIARKLIELSNTTIAAPSANISGRPSPTDFQRCIEDLDEKVDCIL-GGEQSNIGVESTIV 185
Query: 197 DLTRLGKFKILRPG 210
D T + +LRPG
Sbjct: 186 DCTVVPPI-VLRPG 198
>gi|300087769|ref|YP_003758291.1| Sua5/YciO/YrdC/YwlC family protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527502|gb|ADJ25970.1| Sua5/YciO/YrdC/YwlC family protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 205
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 103/200 (51%), Gaps = 15/200 (7%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ + A Q L G ++A PTDT+Y A C A+ RI++IKGR+ T L + V D
Sbjct: 7 ESKLKTATQILVDGGIVAFPTDTVYCLAAAICHESAIERIFQIKGRQTTKALPVLVADSI 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP-----GLESIGVRVPDSN 138
+ + A + L+ +PG +T++L + K L P G ++ VR+P
Sbjct: 67 QMRQVAEVSSVAEMLVRRFMPGALTLILPK-------KPLVPDLVTGGKPTVAVRIPGHT 119
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVD 197
+ + + S L TSANL+G+ S + + E+ + R + DGG+ P G ST+VD
Sbjct: 120 LALYLIKAVGSPLTGTSANLSGRGSVTTAMEVESQIGGRIDSIVDGGLCPGG-IESTIVD 178
Query: 198 LTRLGKFKILRPGSAKEETI 217
LT L +++R G+ +E I
Sbjct: 179 LTGLTP-RLVRSGAVPKEEI 197
>gi|452753388|ref|ZP_21953119.1| YrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [alpha proteobacterium
JLT2015]
gi|451959323|gb|EMD81748.1| YrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [alpha proteobacterium
JLT2015]
Length = 310
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G +A+PT+T+YG A DAC EAV +IY KGR +PL V R+A D L
Sbjct: 26 GDPVAMPTETVYGLAADACDGEAVAKIYAAKGRPSFNPLIAHVSGPEMAARYAAVDELAA 85
Query: 97 GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSA 156
L+ PGP+T+VL S L + GL ++ +R+PD + + L LA SA
Sbjct: 86 DLMRRYWPGPLTLVLPARAGSGLASIVTAGLPTVALRMPDHPVPQALIARLGRPLAAPSA 145
Query: 157 NLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEE 215
N +G S + +L + DGG G ST+V +T G ++LRPG E
Sbjct: 146 NRSGSISPTRAEHVARSLGAAVPLILDGGACSVGLE-STIVAVTD-GALRLLRPGRITAE 203
Query: 216 TIAI 219
+ +
Sbjct: 204 DLGV 207
>gi|225872631|ref|YP_002754088.1| Sua5/YciO/YrdC/YwlC family protein [Acidobacterium capsulatum ATCC
51196]
gi|225793984|gb|ACO34074.1| Sua5/YciO/YrdC/YwlC family protein [Acidobacterium capsulatum ATCC
51196]
Length = 210
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 12/198 (6%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ + +++GKV+ +PTDT YG A D + AV IYE+K R+ PL++ + +
Sbjct: 15 QYVVSCIRSGKVVGMPTDTFYGLAVDPVNLRAVESIYELKSRQKHKPLSLLIANPGQAYE 74
Query: 88 FA--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
A V +H L + PGP+TV++ G L + N G ++ +RVPD+ R +
Sbjct: 75 LAREVDNHFDR-LAERFWPGPLTVIVKAGSRLPLRSTANTG--NVALRVPDAEIPRAVVE 131
Query: 146 GLESALALTSANLTGQPS---SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTR-L 201
L + TSANL + V+D L ER + DGG P +T+VDL+
Sbjct: 132 ALGLPITATSANLQNAAECTYASCVRD--QLGERIPLIVDGGPTPRSLP-TTIVDLSAGG 188
Query: 202 GKFKILRPGSAKEETIAI 219
G+++ILR G+ IA+
Sbjct: 189 GQWQILREGAIPTYAIAL 206
>gi|404491111|ref|YP_006715217.1| hypothetical protein BLi03940 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423684237|ref|ZP_17659076.1| hypothetical protein MUY_04090 [Bacillus licheniformis WX-02]
gi|52350120|gb|AAU42754.1| YwlC [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|383441011|gb|EID48786.1| hypothetical protein MUY_04090 [Bacillus licheniformis WX-02]
Length = 349
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 103/194 (53%), Gaps = 11/194 (5%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A + L+ + +A PT+T+YG +A SEAV +IYE KGR +PL + + ++ + F
Sbjct: 25 QAARLLQQNETVAFPTETVYGLGANAKHSEAVAKIYEAKGRPSDNPLIVHIAEIEQLAEF 84
Query: 89 AVTDHLPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A D P L+ PGP+T+VL + L + GL+++ VR+PD + R
Sbjct: 85 AEVDS-PQAEMLMKRFWPGPLTLVLP-CKPGVLSTRVTAGLDTVAVRMPDHPVALELIRQ 142
Query: 147 LESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRA-GSTVVDLTRLGKF 204
+A SANL+G+PS + N L R A V DGG P+G STVV T G+
Sbjct: 143 AGVPVAAPSANLSGKPSPTKAEHVVNDLNGRIAGVVDGG--PTGVGVESTVVSCT--GEI 198
Query: 205 K-ILRPGSAKEETI 217
ILRPG +E +
Sbjct: 199 PVILRPGGVTKEQL 212
>gi|336115484|ref|YP_004570251.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus coagulans 2-6]
gi|335368914|gb|AEH54865.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus coagulans 2-6]
Length = 351
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 104/193 (53%), Gaps = 9/193 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA Q LK + +A PT+T+YG DA S EAV++I++ KGR +PL + + + +
Sbjct: 23 EAAQLLKEKQTVAFPTETVYGLGADATSDEAVDKIFKAKGRPSDNPLIVHIAEEKQLEEL 82
Query: 89 AVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
A + +P L+ + PGP+T+V+ + + L K + GL+++G+R+P + R
Sbjct: 83 A--EEIPETAKVLMKAFWPGPLTLVV-KVKKGALSKKVTAGLDTVGIRMPRHPVALALIR 139
Query: 146 GLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+A SAN +G+PS + E+L + A + DGG G STV+D+T
Sbjct: 140 LSGLPIAAPSANRSGKPSPTLARHVREDLAGKIAGIVDGGETGVG-VESTVLDVTAEVPV 198
Query: 205 KILRPGSAKEETI 217
ILRPG +E +
Sbjct: 199 -ILRPGGVTKEQL 210
>gi|421747313|ref|ZP_16185037.1| phosphoribosylaminoimidazole carboxylase ATPase subunit, partial
[Cupriavidus necator HPC(L)]
gi|409774084|gb|EKN55760.1| phosphoribosylaminoimidazole carboxylase ATPase subunit, partial
[Cupriavidus necator HPC(L)]
Length = 653
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 110/209 (52%), Gaps = 16/209 (7%)
Query: 20 RPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICV 79
R T A +EA + L+ G+++A PT+T+YG DA + EAV RI+ KGR P+ + V
Sbjct: 435 RMPTAAELDEAARLLEAGQLVAFPTETVYGLGADAENPEAVARIFAAKGRPSNHPIIVHV 494
Query: 80 GDVSDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPD 136
D +DI + TD +P L+D+ PGP+T++L R +S++ + G +SIG+R P
Sbjct: 495 VDGADIGHW--TDDVPEAAQRLIDAFWPGPLTLILKR--ASHIPADVAGGQDSIGLRCPS 550
Query: 137 SNFVRVI----ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAG 192
+ + RG +A SAN GQ S + + + V +G + G
Sbjct: 551 HPVAQALLSRFKRG-RGGIAAPSANKFGQVSPTTAQHVREEFGDSVYVLEGDGVEVG-IE 608
Query: 193 STVVDLTRLGKF---KILRPGSAKEETIA 218
ST+VDL+RL + +LRPG+ +A
Sbjct: 609 STIVDLSRLDQGVGPVLLRPGAITPAMMA 637
>gi|153956296|ref|YP_001397061.1| hypothetical protein CKL_3705 [Clostridium kluyveri DSM 555]
gi|219856613|ref|YP_002473735.1| hypothetical protein CKR_3270 [Clostridium kluyveri NBRC 12016]
gi|146349154|gb|EDK35690.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219570337|dbj|BAH08321.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 350
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 112/203 (55%), Gaps = 8/203 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + ++ G ++A PT+T+YG +A EAV +I++ KGR +PL + + ++ D+
Sbjct: 19 KEAGEIIRNGGLVAFPTETVYGLGANALDPEAVEKIFKAKGRPQDNPLIVHIAEIEDMKP 78
Query: 88 FAVTDHLPHGL--LDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
A+ D P L + + PGP+TV+L + SS + + L+S+G+R+P + R + +
Sbjct: 79 LAI-DISPVALKFIQNFWPGPMTVILPK--SSIVPDITSASLDSVGIRMPSNVIARELIK 135
Query: 146 GLESALALTSANLTGQPSSVSV-KDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+ +A SAN++G+PS V + E+L + + G + G STV+D T +
Sbjct: 136 AAKVPIAAPSANVSGKPSPTDVDRCIEDLNGKVDLILGGSMCDVG-VESTVIDCT-VSPS 193
Query: 205 KILRPGSAKEETIAILEKHSLVE 227
ILRPG E + +EK ++
Sbjct: 194 CILRPGGITLEMLREIEKEVYID 216
>gi|398816995|ref|ZP_10575630.1| Sua5/YciO/YrdC/YwlC family protein [Brevibacillus sp. BC25]
gi|398031507|gb|EJL24893.1| Sua5/YciO/YrdC/YwlC family protein [Brevibacillus sp. BC25]
Length = 359
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 103/197 (52%), Gaps = 10/197 (5%)
Query: 25 AHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSD 84
A +A + L+ G V+A PT+T+YG +A EAV +I+ KGR +PL + +G
Sbjct: 23 AQIVDAARFLREGAVVAFPTETVYGLGANALLDEAVGKIFTAKGRPSDNPLIVHIGAWDQ 82
Query: 85 INRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
++ V +P L+++ PGP+TV+L + + + + GL+S+GVR+PD
Sbjct: 83 LS--TVASEVPEKGKKLMEAFWPGPLTVILPK--TDQVASLVTAGLDSVGVRMPDHPIAL 138
Query: 142 VIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
+ + +A SAN +G+PS + +L R A V DGG G STV+D+T+
Sbjct: 139 ALIKEAGVPIAAPSANRSGRPSPTTAAHVLADLDGRVAGVVDGGATGVG-VESTVIDVTQ 197
Query: 201 LGKFKILRPGSAKEETI 217
ILRPG E +
Sbjct: 198 DPPM-ILRPGGITREQM 213
>gi|340623367|ref|YP_004741820.1| hypothetical protein GYY_00945 [Methanococcus maripaludis X1]
gi|339903635|gb|AEK19077.1| hypothetical protein GYY_00945 [Methanococcus maripaludis X1]
Length = 206
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E E A + + GK+I TDTLYG + +A A+ +IY IK R P++I +G+
Sbjct: 15 EKEIETAKKMILGGKIILCGTDTLYGLSTNALDKNAIEKIYLIKERDPKKPISISLGEKK 74
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP---GLESIGVRVPDSNFV 140
I + D +++ +PGP+TV+L + K + P G + +GVR+PD++ +
Sbjct: 75 QIENYVYVDETAKKIIEKFMPGPITVILKK-------KDIIPDILGKDDVGVRIPDNDVI 127
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDFENLW-ERCACVYDGGVLPSGRAGSTVVDLT 199
R IA L TSAN++G+ + S+++ + + E+ + D G + ST+V +
Sbjct: 128 RNIAV---VPLTTTSANISGKTAPTSLEEVDQIIKEKVDLIVDTGPC-KYKVQSTIVKVI 183
Query: 200 RLGKFKILRPGSAKEETI 217
GK +++R G E I
Sbjct: 184 D-GKIELVREGKIPFEEI 200
>gi|56551895|ref|YP_162734.1| Sua5/YciO/YrdC/YwlC family protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|56543469|gb|AAV89623.1| Sua5/YciO/YrdC/YwlC family protein [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 329
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 3/202 (1%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++ P E+A+Q ++ G + +PT+T+YG A DA S EAV RIY+ KGR +PL +
Sbjct: 11 IILPCDSKGIEKAVQLIRGGYPVGLPTETVYGLAADAFSGEAVARIYQAKGRPSFNPLIV 70
Query: 78 CVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
+ + + L PG +T+VL + + + + GL+++ +R+P
Sbjct: 71 HIAHIEQAAEIVEFNDEALSLAQKFWPGALTMVLPLKKDAKIASIVTAGLDTVAIRMPSH 130
Query: 138 NFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVV 196
+R + + LA SAN +G S + ++ E+L + A V DGG+ G ST++
Sbjct: 131 PVMRQVIKAFGHPLAAPSANKSGSISPTTALHVKESLNGKIAAVLDGGIADKGLE-STII 189
Query: 197 DLTRLGKFKILRPGSAKEETIA 218
+ K+LRPG E +A
Sbjct: 190 -YVGADEIKLLRPGPITSEELA 210
>gi|383456098|ref|YP_005370087.1| Sua5/YciO/YrdC/YwlC family protein [Corallococcus coralloides DSM
2259]
gi|380734794|gb|AFE10796.1| Sua5/YciO/YrdC/YwlC family protein [Corallococcus coralloides DSM
2259]
Length = 206
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 98/193 (50%), Gaps = 8/193 (4%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
H A++ L+ G +IA PTDT YG CD + +A+ R+Y++KGR PL++ D+SD+
Sbjct: 20 HVARAVEVLEKGGLIAYPTDTYYGLGCDLNAKKAIERLYQLKGRDKKKPLSLLCPDLSDV 79
Query: 86 NRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNL-EKSLNPGLESIGVRVPDSNFVRVIA 144
R+A + + + L PG T +L E++ L + + + +G+RVPD+ R +A
Sbjct: 80 ARYAHVSNFAYRAMKGLTPGAFTFIL---EATRLVPEVMMTKQKQVGLRVPDAALPRELA 136
Query: 145 RGLESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ L L TSA T +D + L + DGGV + STVV L
Sbjct: 137 KALGRPLITTSATHTDGTVLSDARDIKTALGHGLDLILDGGV--TLNEPSTVVSLIG-DT 193
Query: 204 FKILRPGSAKEET 216
+ILR G E+
Sbjct: 194 LEILRQGKGSLES 206
>gi|404317399|ref|ZP_10965332.1| Sua5/YciO/YrdC/YwlC family protein [Ochrobactrum anthropi CTS-325]
Length = 323
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL V ++ R
Sbjct: 13 QRAVEVLRRGGLVAIPTETVYGLAADAANGEGVAGIFAAKGRPQFNPLIAHVSGIAMAER 72
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVI 143
+ D L L + PGP+T+VL + + ++ ++P GL ++ +R+P VR I
Sbjct: 73 YVTFDALSRKLAEMFWPGPLTIVLPLKDRQDTDRPIHPLVTAGLSTLAIRMPLGR-VRDI 131
Query: 144 ARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
L+S +A SAN +G+ S S + ++L + + D G P G + +
Sbjct: 132 IEELDSPVAAPSANTSGRISPTSARAVADDLGNKLDLILDAG--PCGVGVESTIVKVDGN 189
Query: 203 KFKILRPGSAKEETIAILEKHSLV 226
K +LRPG E I + LV
Sbjct: 190 KVHLLRPGGLAAEEIEAVIGEKLV 213
>gi|315652210|ref|ZP_07905205.1| Sua5/YciO/YrdC/YwlC family protein [Lachnoanaerobaculum saburreum
DSM 3986]
gi|315485516|gb|EFU75903.1| Sua5/YciO/YrdC/YwlC family protein [Lachnoanaerobaculum saburreum
DSM 3986]
Length = 366
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A +K+G ++A PT+T+YG DA EA +IY KGR +PL + + ++ +++ A
Sbjct: 33 AADIIKSGGLVAFPTETVYGLGADAFMEEAAKKIYVAKGRPSDNPLIVHISEIREVDDIA 92
Query: 90 -VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
+ + L PGP+TVVL + + + + + GL+++ VR+PD+N R I +
Sbjct: 93 ECIPDIFYSLAKKYWPGPMTVVLKK--RNIVPDATSGGLDTVAVRLPDNNIARAIIKESG 150
Query: 149 SALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A SAN +G+PS + E++ + + DGG + G ST++DLT +L
Sbjct: 151 VPIAAPSANTSGRPSPTKARHVLEDMNGKIDMIIDGGTVGIG-VESTIIDLTS-DIPTLL 208
Query: 208 RPGSAKEETIAILE 221
RPG+ T+ +LE
Sbjct: 209 RPGAV---TLEMLE 219
>gi|397676197|ref|YP_006517735.1| Sua5/YciO/YrdC/YwlC family protein [Zymomonas mobilis subsp.
mobilis ATCC 29191]
gi|395396886|gb|AFN56213.1| Sua5/YciO/YrdC/YwlC family protein [Zymomonas mobilis subsp.
mobilis ATCC 29191]
Length = 329
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 3/202 (1%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++ P E+A+Q ++ G + +PT+T+YG A DA S EAV RIY+ KGR +PL +
Sbjct: 11 IILPCDSKGIEKAVQLIRGGYPVGLPTETVYGLAADAFSGEAVARIYQAKGRPSFNPLIV 70
Query: 78 CVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
+ + + L PG +T+VL + + + + GL+++ +R+P
Sbjct: 71 HIAHIEQAAEIVEFNDEALSLAQKFWPGALTMVLPLKKDAKIASIVTAGLDTVAIRMPSH 130
Query: 138 NFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVV 196
+R + + LA SAN +G S + ++ E+L + A V DGG+ G ST++
Sbjct: 131 PVMRQVIKAFGHPLAAPSANKSGSISPTTALHVKESLNGKIAAVLDGGIADKGLE-STII 189
Query: 197 DLTRLGKFKILRPGSAKEETIA 218
+ K+LRPG E +A
Sbjct: 190 -YVGADEIKLLRPGPITSEELA 210
>gi|418007785|ref|ZP_12647659.1| putative RNA-binding protein [Lactobacillus casei UW4]
gi|410548167|gb|EKQ22382.1| putative RNA-binding protein [Lactobacillus casei UW4]
Length = 333
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 4/201 (1%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ EA+ ALK G+++A PT+T+YG DA + AV ++Y KGR +PL + V D
Sbjct: 7 ESDIPEAVAALKRGELVAFPTETVYGLGADATNVTAVGKVYAAKGRPTDNPLIVTVADAD 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ ++A L L+++ PGP+T++L+ L + GL++ R PD+ R +
Sbjct: 67 MVGQYAAITPLAAKLMEAFWPGPLTIILNI-LPGRLSMKVTGGLQTAAFRNPDNALTRKL 125
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ SAN +G+PS + +L + A V D G G S ++DLT +
Sbjct: 126 IATAGVPIVGPSANTSGKPSPTTADHVLHDLDGKIAGVLDDGPTQVG-VESAIIDLT-VT 183
Query: 203 KFKILRPGSAKEETIAILEKH 223
ILRPG+ + + L H
Sbjct: 184 PPAILRPGAIGPDELEPLIGH 204
>gi|291543207|emb|CBL16316.1| translation factor SUA5 [Ruminococcus champanellensis 18P13]
Length = 341
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 104/196 (53%), Gaps = 5/196 (2%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
EA ++A ++ G+V+ +PT+T+YG A DA + +AV +++ KGR +PL + + +
Sbjct: 10 EAGLQKAAGLIREGQVVGMPTETVYGLAADATNRDAVAKVFAAKGRPMDNPLIVHISSME 69
Query: 84 DINR-FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
++ + + L L D+ PGP+T+++ + E +E S GL+++GVR+P +
Sbjct: 70 ELEQAVSRVPELVASLADAFWPGPLTMIMPKSELIPMETS--GGLDTVGVRMPSHPVAQA 127
Query: 143 IARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ R +A SAN +G PS + + ++ R + DGG G STVV
Sbjct: 128 LIRIAGVPIAAPSANRSGYPSPTTAQHVLADMQGRIPAILDGGACSCGLE-STVVAFDDD 186
Query: 202 GKFKILRPGSAKEETI 217
+ILRPG +E +
Sbjct: 187 RTVRILRPGFVTKEML 202
>gi|352516339|ref|YP_004885656.1| hypothetical protein TEH_01650 [Tetragenococcus halophilus NBRC
12172]
gi|348600446|dbj|BAK93492.1| hypothetical protein TEH_01650 [Tetragenococcus halophilus NBRC
12172]
Length = 344
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 104/192 (54%), Gaps = 5/192 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA Q LK G ++A PT+T+YG +A +S+AV+ ++++KGR H +PL + V + +
Sbjct: 16 EAAQKLKKGGLVAFPTETVYGLGANAMNSDAVSGVFDVKGRPHDNPLIVHVNSFEQVKDY 75
Query: 89 AVTDH-LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
V H L D+ PGP+T++ + ++ K ++ GL S+ R+PD+ ++ +
Sbjct: 76 VVALHPYAQKLADTYWPGPLTLI-CQTKTDLFAKEVSAGLPSVSFRMPDNEATLMLLKKA 134
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF-K 205
SAN +G+PS + + + +L + + D G G STV+D++ +
Sbjct: 135 GVPAVGPSANTSGKPSPTTYEHVYHDLQGKIDGILDDGATKIG-VESTVIDVSDPEQNPM 193
Query: 206 ILRPGSAKEETI 217
ILRPG+ +E I
Sbjct: 194 ILRPGAITKEQI 205
>gi|218290081|ref|ZP_03494248.1| Sua5/YciO/YrdC/YwlC family protein [Alicyclobacillus acidocaldarius
LAA1]
gi|218239915|gb|EED07103.1| Sua5/YciO/YrdC/YwlC family protein [Alicyclobacillus acidocaldarius
LAA1]
Length = 360
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 16/208 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E Q+L+ G ++A PT+T+YG +A EAV RI+ K R +PL + + D D R
Sbjct: 20 REPAQSLRRGGLVAFPTETVYGLGANALEEEAVRRIFAAKERPRDNPLIVHIAD-DDQLR 78
Query: 88 FAVTDHLP-H----GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ ++ P H L+ + PGP+T++L G + L S++PG +GVR+PD R
Sbjct: 79 DVIDENQPLHEDAVRLMRAFWPGPLTLLLPAG--ARLAPSVHPGQPLVGVRMPDHPVARA 136
Query: 143 IARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ +A SAN +G+PS + D +L R + DGG P G STV+ L
Sbjct: 137 LIAEAGVPVAAPSANRSGRPSPTTPDDVAADLDGRIDWLVDGGPCPIG-VESTVL-LLEP 194
Query: 202 GKFKILRPGSAKEETIAILEKHSLVEEP 229
+ILRPG +E IA S+++ P
Sbjct: 195 DCARILRPGGVTQEMIA-----SVIDRP 217
>gi|448664345|ref|ZP_21684148.1| DNA binding protein [Haloarcula amylolytica JCM 13557]
gi|445774990|gb|EMA26004.1| DNA binding protein [Haloarcula amylolytica JCM 13557]
Length = 194
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 98/175 (56%), Gaps = 6/175 (3%)
Query: 25 AHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSD 84
A ++A A++ G+++ PT+T+YG DA + AV R++E KGR+ P+++ V DV
Sbjct: 2 ATVDDAASAVRNGELVVYPTETVYGLGADALDAAAVERVFEAKGRERDKPVSMAVPDVES 61
Query: 85 INRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF-VRVI 143
+ + LPGPVTVV+ R ++ + L G + +GVRVPD + + ++
Sbjct: 62 AREYTRPSDRELAFMREFLPGPVTVVVERRDA--VPDVLVAGRDRVGVRVPDHDLALELL 119
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDL 198
A L TSAN++G PS+ ++ D + + ER A V D G G GSTVV++
Sbjct: 120 AE--TGPLTATSANISGNPSARTIDDLDAIRERAAVVLDAGETDGG-TGSTVVNV 171
>gi|52082226|ref|YP_081017.1| hypothetical protein BL03986 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319648100|ref|ZP_08002317.1| YwlC protein [Bacillus sp. BT1B_CT2]
gi|52005437|gb|AAU25379.1| conserved protein YwlC [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|317389735|gb|EFV70545.1| YwlC protein [Bacillus sp. BT1B_CT2]
Length = 347
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 103/194 (53%), Gaps = 11/194 (5%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A + L+ + +A PT+T+YG +A SEAV +IYE KGR +PL + + ++ + F
Sbjct: 23 QAARLLQQNETVAFPTETVYGLGANAKHSEAVAKIYEAKGRPSDNPLIVHIAEIEQLAEF 82
Query: 89 AVTDHLPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A D P L+ PGP+T+VL + L + GL+++ VR+PD + R
Sbjct: 83 AEVDS-PQAEMLMKRFWPGPLTLVLP-CKPGVLSTRVTAGLDTVAVRMPDHPVALELIRQ 140
Query: 147 LESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRA-GSTVVDLTRLGKF 204
+A SANL+G+PS + N L R A V DGG P+G STVV T G+
Sbjct: 141 AGVPVAAPSANLSGKPSPTKAEHVVNDLNGRIAGVVDGG--PTGVGVESTVVSCT--GEI 196
Query: 205 K-ILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 PVILRPGGVTKEQL 210
>gi|424898558|ref|ZP_18322132.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393182785|gb|EJC82824.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 324
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 92/188 (48%), Gaps = 4/188 (2%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+A E A AL G IA+PT+T+YG A DA + A+ RIYE KGR +PL + D++
Sbjct: 12 QAALEAACTALADGFAIAIPTETVYGLAADATNPAAITRIYETKGRPRFNPLICHMADLA 71
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
A D + L + PGP+T+VL S + GL+S+GVRVP F +
Sbjct: 72 MAEEHAEFDPVSRALAAAFWPGPLTLVLPLKPQSPIHSLATAGLDSVGVRVP-KGFAGAL 130
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
LA SAN +G S+ S E +L + + D G PS + +
Sbjct: 131 IGAFGRPLAAPSANTSGAISATSAAHVEADLGAKLPLILDAG--PSTVGVESTIVKVEGD 188
Query: 203 KFKILRPG 210
+ ++LRPG
Sbjct: 189 RVRLLRPG 196
>gi|256853868|ref|ZP_05559233.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis T8]
gi|307290431|ref|ZP_07570346.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0411]
gi|422685004|ref|ZP_16743229.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX4000]
gi|256710811|gb|EEU25854.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis T8]
gi|306498624|gb|EFM68126.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX0411]
gi|315030389|gb|EFT42321.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus faecalis TX4000]
Length = 340
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 100/186 (53%), Gaps = 9/186 (4%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+++A PT+T+YG A + AV ++Y++KGR +PL + V +V + ++ T LP
Sbjct: 21 GELVAFPTETVYGLGAAALNEAAVKKVYQVKGRPSDNPLIVHVNNVEMVKKYVAT--LPE 78
Query: 97 ---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PGP+T++ + S K++ GLE++ R+PD+ + L
Sbjct: 79 VATKLVSAFWPGPLTLIFNV-PSDTFSKTVTGGLETVAFRMPDNQATLALIEQANVPLVG 137
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT-RLGKFKILRPGS 211
SAN +G+PS S + + +L + A + D G G STV+DLT G ILRPG+
Sbjct: 138 PSANTSGKPSPTSAEHVYHDLQGKIAAILDDGPTQIG-VESTVLDLTAEDGVPVILRPGA 196
Query: 212 AKEETI 217
+E +
Sbjct: 197 ITKEQL 202
>gi|163943013|ref|YP_001647897.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus weihenstephanensis
KBAB4]
gi|423519990|ref|ZP_17496471.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HuA2-4]
gi|163865210|gb|ABY46269.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus weihenstephanensis
KBAB4]
gi|401157257|gb|EJQ64657.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HuA2-4]
Length = 346
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 KEAARLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R + + + GL ++GVR+PD +
Sbjct: 81 -GIVREIPPVAEKLMEHFWPGPLTIILPR--KKGISERVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSEVP 196
Query: 204 FKILRPGS-AKEETIAILEKHSL 225
ILRPG KE+ A++ SL
Sbjct: 197 -TILRPGGITKEQLEAVIGNVSL 218
>gi|384161313|ref|YP_005543386.1| ribosome maturation factor; RNA binding protein [Bacillus
amyloliquefaciens TA208]
gi|384166218|ref|YP_005547597.1| ribosome maturation factor; RNA binding protein [Bacillus
amyloliquefaciens LL3]
gi|384170411|ref|YP_005551789.1| ribosome maturation factor; RNA binding protein [Bacillus
amyloliquefaciens XH7]
gi|328555401|gb|AEB25893.1| ribosome maturation factor; RNA binding protein [Bacillus
amyloliquefaciens TA208]
gi|328913773|gb|AEB65369.1| putative ribosome maturation factor; RNA binding protein [Bacillus
amyloliquefaciens LL3]
gi|341829690|gb|AEK90941.1| putative ribosome maturation factor; RNA binding protein [Bacillus
amyloliquefaciens XH7]
Length = 346
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 11/200 (5%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ +A + L+ +V+A PT+T+YG +A ++EAV +IYE KGR +PL + + D+
Sbjct: 17 TDPQITQAAELLRQNEVVAFPTETVYGLGANAENTEAVTKIYEAKGRPSDNPLIVHISDI 76
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
++RF H+P L+ PG +T+VL + L + GLE++ VR+PD
Sbjct: 77 GQLDRF--ISHVPETAKKLMKLFWPGALTLVLP-CKPGVLSPRVTAGLETVAVRMPDHPV 133
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDL 198
+ +A SANL+G+PS + +L R A + DGG G STV L
Sbjct: 134 ALALISSAGLPIAAPSANLSGKPSPTKAEHVAHDLNGRIAGIVDGGATGIG-VESTV--L 190
Query: 199 TRLGKFKI-LRPGSAKEETI 217
+ GK + LRPG +E I
Sbjct: 191 SCAGKQPVLLRPGGVTKEQI 210
>gi|229014495|ref|ZP_04171613.1| hypothetical protein bmyco0001_48980 [Bacillus mycoides DSM 2048]
gi|229064976|ref|ZP_04200274.1| hypothetical protein bcere0026_50330 [Bacillus cereus AH603]
gi|229136144|ref|ZP_04264897.1| hypothetical protein bcere0014_50170 [Bacillus cereus BDRD-ST196]
gi|229170033|ref|ZP_04297725.1| hypothetical protein bcere0007_49700 [Bacillus cereus AH621]
gi|423369289|ref|ZP_17346720.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD142]
gi|423471489|ref|ZP_17448233.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG6O-2]
gi|423490471|ref|ZP_17467153.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BtB2-4]
gi|423496194|ref|ZP_17472838.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus CER057]
gi|423497012|ref|ZP_17473629.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus CER074]
gi|423513228|ref|ZP_17489758.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HuA2-1]
gi|423557160|ref|ZP_17533463.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus MC67]
gi|423595496|ref|ZP_17571526.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD048]
gi|423597417|ref|ZP_17573417.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD078]
gi|423659823|ref|ZP_17634992.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VDM022]
gi|423670874|ref|ZP_17645903.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VDM034]
gi|423672899|ref|ZP_17647838.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VDM062]
gi|228613458|gb|EEK70591.1| hypothetical protein bcere0007_49700 [Bacillus cereus AH621]
gi|228647303|gb|EEL03385.1| hypothetical protein bcere0014_50170 [Bacillus cereus BDRD-ST196]
gi|228716277|gb|EEL67989.1| hypothetical protein bcere0026_50330 [Bacillus cereus AH603]
gi|228746845|gb|EEL96730.1| hypothetical protein bmyco0001_48980 [Bacillus mycoides DSM 2048]
gi|401078174|gb|EJP86492.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD142]
gi|401149579|gb|EJQ57047.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus CER057]
gi|401163213|gb|EJQ70563.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus CER074]
gi|401193531|gb|EJR00536.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus MC67]
gi|401221800|gb|EJR28411.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD048]
gi|401238949|gb|EJR45381.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VD078]
gi|401295161|gb|EJS00786.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VDM034]
gi|401303962|gb|EJS09521.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VDM022]
gi|401310999|gb|EJS16307.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus VDM062]
gi|402429234|gb|EJV61322.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BtB2-4]
gi|402431506|gb|EJV63571.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG6O-2]
gi|402445864|gb|EJV77730.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HuA2-1]
Length = 346
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 KEAARLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R + + + GL ++GVR+PD +
Sbjct: 81 -GIVREIPPVAEKLMEHFWPGPLTIILPR--KKGISERVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSEVP 196
Query: 204 FKILRPGS-AKEETIAILEKHSL 225
ILRPG KE+ A++ SL
Sbjct: 197 -TILRPGGITKEQLEAVIGNVSL 218
>gi|91762257|ref|ZP_01264222.1| Sua5/YciO/YrdC family protein [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718059|gb|EAS84709.1| Sua5/YciO/YrdC family protein [Candidatus Pelagibacter ubique
HTCC1002]
Length = 310
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 22 ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
+ +++ ++A + L I VPT+T+YG A +A + AV +IY +K R +PL + D
Sbjct: 3 SNQSNIKKAKKYLDKNYCIGVPTETVYGLAANAYKNSAVKKIYNLKKRPKNNPLIVHYHD 62
Query: 82 VSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
+ + + + + L PGP+T VL ++S + K + +S+ VR P +
Sbjct: 63 IDSLKKDCLINDNFIKLYKKFSPGPITYVLQLKKNSKISKYVTNNKKSLAVRFPKHTIFK 122
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
+ + L+ LA SAN+T + S+V+ KD E ++ + DGG G ST+V+LT
Sbjct: 123 NLLKQLDYPLAAPSANITTKVSAVNAKDVKEEFGKKIKYILDGGTCAIG-IESTIVNLT- 180
Query: 201 LGKFKILRPG 210
K ILR G
Sbjct: 181 -AKPTILRLG 189
>gi|373112384|ref|ZP_09526616.1| Sua5/YciO/YrdC/YwlC family protein [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|371655803|gb|EHO21141.1| Sua5/YciO/YrdC/YwlC family protein [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
Length = 202
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 9/204 (4%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E +E + +K G +I PTDT+YG A S EA+ +Y+ K R +SPL V V
Sbjct: 2 EVKYKEIGEQIKKGALIIYPTDTVYGIAASMQSEEALIHLYQAKSRNFSSPLIALVDSVE 61
Query: 84 DINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
I+ A D L + PG +TV+L + + K + G ++GVR+P+
Sbjct: 62 RISEIAYIDSKKEELEKLSKAFWPGGLTVILPAKDC--VPKIMISGGNTVGVRIPNHEMA 119
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLT 199
I R L TSAN++G+ + S ++ E + ++ V DGGV P G A ST++D T
Sbjct: 120 LEIIRAAGGILPTTSANISGEATPSSYQELSEAIKQKADIVIDGGVCPVGEA-STILDFT 178
Query: 200 RLGKFKILRPGS-AKEETIAILEK 222
+ +ILR G+ KEE A++ K
Sbjct: 179 K-DSLQILRLGAITKEEIEAVIGK 201
>gi|418323286|ref|ZP_12934567.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus pettenkoferi
VCU012]
gi|365229933|gb|EHM71057.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus pettenkoferi
VCU012]
Length = 343
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 111/206 (53%), Gaps = 7/206 (3%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
+E E + + +++ +PT+T+YG +A S EAV RIYE KGR +PL + + +
Sbjct: 13 SEQDLNEIKEQFEASELVVIPTETVYGLGGNARSDEAVKRIYEAKGRPSDNPLIVHIHSM 72
Query: 83 SDINRFAVTDHLPH--GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
+ ++ F V + P L+ + PGP++ +L ++ L K + GL SI VR+P
Sbjct: 73 TQLDDF-VEEVSPEVRELMRAFWPGPISFILPL-KAGYLCKRVIGGLNSIAVRMPSHPVG 130
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
R I + + +A SANL+G+PS + F++L R A + +G G STV+D T
Sbjct: 131 RRILQYVNLPIAAPSANLSGRPSPTMFQHAFDDLNGRVAGIVNGDQSEEGLE-STVLDCT 189
Query: 200 RLGKFKILRPGSAKEETIAILEKHSL 225
F+I RPG+ +E I + HS+
Sbjct: 190 TY-PFQIARPGAITKEMIEAVLPHSV 214
>gi|110633072|ref|YP_673280.1| translation factor SUA5 [Chelativorans sp. BNC1]
gi|110284056|gb|ABG62115.1| translation factor SUA5 [Chelativorans sp. BNC1]
Length = 318
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 101/201 (50%), Gaps = 8/201 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A + L G+ +A+PT+T+YG A DA + EAV RI+E KGR +PL + D+ R
Sbjct: 12 DAACRLLAAGEPVAIPTETVYGLAADARNGEAVARIFEAKGRPRFNPLIAHMADLEMAGR 71
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
FAV L L + PGP+T+VL + + GL+++ +R P VIAR
Sbjct: 72 FAVFSPLALRLAQAFWPGPLTLVLPHRPDLGIHPLVTAGLDTLALRCPQGFAANVIAR-F 130
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAG--STVVDLTRLGKF 204
LA SAN++G+ + + + L +R V DGG R G ST+V +
Sbjct: 131 GRPLAAPSANISGRVTGTTAEAVNAALGDRIRLVVDGG---PARVGLESTIVKVAD-ETL 186
Query: 205 KILRPGSAKEETIAILEKHSL 225
+LRPG E I + SL
Sbjct: 187 ILLRPGGLAAEEIERVAGMSL 207
>gi|423520844|ref|ZP_17497317.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HuA4-10]
gi|401179941|gb|EJQ87104.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus HuA4-10]
Length = 346
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 KEAARLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R + + + GL ++GVR+PD +
Sbjct: 81 -GIVREIPSVAEKLMEHFWPGPLTIILPR--KKGISERVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSEVP 196
Query: 204 FKILRPGS-AKEETIAILEKHSL 225
ILRPG KE+ A++ SL
Sbjct: 197 -TILRPGGITKEQLEAVIGNVSL 218
>gi|423484648|ref|ZP_17461337.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG6X1-2]
gi|401138109|gb|EJQ45684.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG6X1-2]
Length = 346
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 KEAARLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R + + + GL ++GVR+PD +
Sbjct: 81 -GIVREIPPVAEKLMEHFWPGPLTIILPR--KKGISERVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSEVP 196
Query: 204 FKILRPGS-AKEETIAILEKHSL 225
ILRPG KE+ A++ SL
Sbjct: 197 -TILRPGGITKEQLEAVIGNVSL 218
>gi|225631196|ref|ZP_03787894.1| Sua5/YciO/YrdC/YwlC family protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225591104|gb|EEH12288.1| Sua5/YciO/YrdC/YwlC family protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 195
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 100/190 (52%), Gaps = 5/190 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+ I A++ ++ PT+T+Y AC+A +E++ +IY+IK R PL+I V D+ ++ +
Sbjct: 4 KIINAIQNNLLVCFPTETVYALACNALDNESIGKIYQIKKRSQNKPLSIFVSDIYNLTKI 63
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A L++ PGP+ +L ++ L +SIG+R+P+ I L+
Sbjct: 64 AKVKERYIDLINHFSPGPIAYILPLKNNNILPNEF--FKDSIGIRIPEHPIAISILNKLK 121
Query: 149 SALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ TS N++G+ S D +++ + + V + L SG ST++DLT K K+L
Sbjct: 122 VPIVATSTNISGKESVCKANDIPQSIKQHLSVVIEDDELVSG-IESTIIDLTE-DKIKVL 179
Query: 208 RPGSAKEETI 217
R G+ +T+
Sbjct: 180 REGAISLQTV 189
>gi|423076032|ref|ZP_17064746.1| Sua5/YciO/YrdC/YwlC family protein [Desulfitobacterium hafniense
DP7]
gi|361852849|gb|EHL05047.1| Sua5/YciO/YrdC/YwlC family protein [Desulfitobacterium hafniense
DP7]
Length = 351
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 124/230 (53%), Gaps = 15/230 (6%)
Query: 5 LENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIY 64
L+ +V+++ + P TE +EA Q ++ G+++A+PT+T+YG +A + A I+
Sbjct: 4 LQTKRVTIDAQ----HPQTE-WIKEAAQLIREGQLVALPTETVYGLGANAMDAHACQEIF 58
Query: 65 EIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLL--DSLLPGPVTVVLSRGESSNLEKS 122
++KGR +PL + + D++ + R V + P L D PGP+T+VL + ++ +
Sbjct: 59 KVKGRPQDNPLIVHISDLAMVKRL-VEEWTPQAALCADKFWPGPLTLVLEK--TAFVPDV 115
Query: 123 LNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSV-SVKDFENLWERCACVY 181
++ GL ++ +R+P + + +A SANL+G+PS + +++L + +
Sbjct: 116 VSGGLGTVAIRMPQHPVALELIKEAGVPIAAPSANLSGKPSPTRGIHVWKDLKGKIPLIL 175
Query: 182 DGGVLPSGRAGSTVVDLTRLGKF-KILRPGSAKEETIAILEKHSLVEEPA 230
DGG G STV+DLT G+ ILRPG +E + + V+ PA
Sbjct: 176 DGGPCAVG-VESTVLDLT--GEVPTILRPGGITKEQLEEVLGEVAVDRPA 222
>gi|219670827|ref|YP_002461262.1| Sua5/YciO/YrdC/YwlC family protein [Desulfitobacterium hafniense
DCB-2]
gi|219541087|gb|ACL22826.1| Sua5/YciO/YrdC/YwlC family protein [Desulfitobacterium hafniense
DCB-2]
Length = 348
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 116/214 (54%), Gaps = 11/214 (5%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
P TE +EA Q ++ G+++A+PT+T+YG +A + A I+++KGR +PL + +
Sbjct: 13 PQTE-WIKEAAQLIREGQLVALPTETVYGLGANAMDAHACQEIFKVKGRPQDNPLIVHIS 71
Query: 81 DVSDINRFAVTDHLPHGLL--DSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
D++ + R V + P L D PGP+T+VL + ++ + ++ GL ++ +R+P
Sbjct: 72 DLAMVKRL-VEEWTPQAALCADKFWPGPLTLVLEK--TAFVPDVVSGGLGTVAIRMPQHP 128
Query: 139 FVRVIARGLESALALTSANLTGQPSSV-SVKDFENLWERCACVYDGGVLPSGRAGSTVVD 197
+ + +A SANL+G+PS + +++L + + DGG G STV+D
Sbjct: 129 VALELIKEAGVPIAAPSANLSGKPSPTRGIHVWKDLKGKIPLILDGGPCAVG-VESTVLD 187
Query: 198 LTRLGKF-KILRPGSAKEETIAILEKHSLVEEPA 230
LT G+ ILRPG +E + + V+ PA
Sbjct: 188 LT--GEVPTILRPGGITKEQLEEVLGEVAVDRPA 219
>gi|448680169|ref|ZP_21690608.1| DNA binding protein [Haloarcula argentinensis DSM 12282]
gi|445769817|gb|EMA20890.1| DNA binding protein [Haloarcula argentinensis DSM 12282]
Length = 194
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 98/175 (56%), Gaps = 6/175 (3%)
Query: 25 AHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSD 84
A ++A A++ G+++ PT+T+YG DA + AV R++E KGR+ P+++ V DV
Sbjct: 2 ATVDDAATAVRNGELVVYPTETVYGLGADALDAAAVERVFEAKGRERDKPVSMAVPDVES 61
Query: 85 INRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF-VRVI 143
+ + LPGPVTVV+ R ++ + L G + +GVRVPD + + ++
Sbjct: 62 AREYTRLSDRELAFMREFLPGPVTVVVERRDA--VPDVLVAGRDRVGVRVPDHDLALELL 119
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDL 198
A L TSAN++G PS+ ++ D + + ER A V D G G GSTVV++
Sbjct: 120 AE--TGPLTATSANISGNPSARTIDDLDAIRERAAVVLDAGETDGG-TGSTVVNV 171
>gi|261420780|ref|YP_003254462.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus sp. Y412MC61]
gi|261377237|gb|ACX79980.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus sp. Y412MC61]
Length = 349
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 104/193 (53%), Gaps = 9/193 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA++ L+ G+VIA PT+T+YG DA ++ AV +I+ KGR +PL + V ++
Sbjct: 23 EAVEWLRAGEVIAFPTETVYGLGADAANTAAVEKIFAAKGRPSDNPLIVHVASMAQAEAV 82
Query: 89 AVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A + + L++ PGP+T+VL + + + + + GL ++ VR+PD +
Sbjct: 83 AASIPPMAKTLMERFWPGPLTLVLPK-RAKAVSERVTAGLPTVAVRMPDHPLALALIEAS 141
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGKF- 204
ALA SAN +G+PS + +L R A V DGG P+G STV+D + G
Sbjct: 142 GLALAAPSANRSGRPSPTTAAHVLADLDGRIAGVIDGG--PTGVGVESTVLDCS--GSVP 197
Query: 205 KILRPGSAKEETI 217
ILRPG +E +
Sbjct: 198 TILRPGGVTKEAL 210
>gi|319768450|ref|YP_004133951.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus sp. Y412MC52]
gi|317113316|gb|ADU95808.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus sp. Y412MC52]
Length = 355
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 104/193 (53%), Gaps = 9/193 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA++ L+ G+VIA PT+T+YG DA ++ AV +I+ KGR +PL + V ++
Sbjct: 29 EAVEWLRAGEVIAFPTETVYGLGADAANTAAVEKIFAAKGRPSDNPLIVHVASMAQAEAV 88
Query: 89 AVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A + + L++ PGP+T+VL + + + + + GL ++ VR+PD +
Sbjct: 89 AASIPPMAKTLMERFWPGPLTLVLPK-RAKAVSERVTAGLPTVAVRMPDHPLALALIEAS 147
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGKF- 204
ALA SAN +G+PS + +L R A V DGG P+G STV+D + G
Sbjct: 148 GLALAAPSANRSGRPSPTTAAHVLADLDGRIAGVIDGG--PTGVGVESTVLDCS--GSVP 203
Query: 205 KILRPGSAKEETI 217
ILRPG +E +
Sbjct: 204 TILRPGGVTKEAL 216
>gi|86356545|ref|YP_468437.1| translation factor sua5 protein [Rhizobium etli CFN 42]
gi|86280647|gb|ABC89710.1| probable translation factor sua5 protein [Rhizobium etli CFN 42]
Length = 336
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 91/184 (49%), Gaps = 4/184 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A AL G IA+PT+T+YG A DA + A+ RIYE KGR +PL + D+ +
Sbjct: 26 EAACAALSDGFAIAMPTETVYGLAADATNPAAITRIYETKGRPRFNPLICHMADLEMAEQ 85
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A D + L ++ PGP+T+VL S + GL+S+GVRVP F +
Sbjct: 86 HAEFDPVSRALAEAFWPGPLTLVLPLKAESPIHALATAGLDSVGVRVP-KGFAGTLIGAF 144
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
LA SAN +G S+ S E +L + + D G PS + + + ++
Sbjct: 145 GRPLAAPSANTSGAISATSAAHVEADLGAKIPLILDAG--PSTVGVESTIVKVEGDRVRL 202
Query: 207 LRPG 210
LRPG
Sbjct: 203 LRPG 206
>gi|222147737|ref|YP_002548694.1| hypothetical protein Avi_0976 [Agrobacterium vitis S4]
gi|221734725|gb|ACM35688.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 323
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A+ L+ G+VIA+PT+T+YG A DA + +A+ RIYE KGR +PL V D++ +
Sbjct: 18 ALPLLEAGEVIAMPTETVYGLAADATNPQAITRIYETKGRPQFNPLICHVADLAMAEHYG 77
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
V D L L + PGP+T+++ + GL+++G+R+P +IA
Sbjct: 78 VFDPLSRQLAERFWPGPLTLIVPLAPDCAIHPLATAGLDTVGLRMPLGFAAELIA-AFGK 136
Query: 150 ALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
LA SAN +G+ S + E+L + + D G ST++ + G+ ++LR
Sbjct: 137 PLAAPSANTSGKISPTTAAHVEEDLGAKIPLILDAEAAGVG-VESTILKVED-GQIQLLR 194
Query: 209 PGSAKEETI 217
PG E +
Sbjct: 195 PGGLSVEAV 203
>gi|194016307|ref|ZP_03054921.1| YwlC [Bacillus pumilus ATCC 7061]
gi|194011780|gb|EDW21348.1| YwlC [Bacillus pumilus ATCC 7061]
Length = 350
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 9/194 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A L+ +V+A PT+T+YG +A +EAV +IYE KGR +PL + + ++ ++
Sbjct: 23 EQAALLLQQNEVVAFPTETVYGLGANAKETEAVMKIYEAKGRPSDNPLIVHIAEIEQLHE 82
Query: 88 FA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
FA + L+D+ PG +T+VL + L K + GL ++GVR+PD + R
Sbjct: 83 FAQIESEKAKALMDAFWPGALTIVLP-CKPGTLSKQVTAGLSTVGVRMPDHPIALELIRT 141
Query: 147 LESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTV--VDLTRLGK 203
+A SAN +G+PS +L R A + DGG G + V VD +
Sbjct: 142 AGLPIAAPSANRSGKPSPTQADHVASDLDGRIAGIVDGGSTGIGVESTVVSCVDEIPV-- 199
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 200 --ILRPGGITKEAL 211
>gi|256811084|ref|YP_003128453.1| Sua5/YciO/YrdC/YwlC family protein [Methanocaldococcus fervens
AG86]
gi|256794284|gb|ACV24953.1| Sua5/YciO/YrdC/YwlC family protein [Methanocaldococcus fervens
AG86]
Length = 207
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 87/157 (55%), Gaps = 14/157 (8%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 91
+ L GK+I TDTLYG + +A AV ++Y+IK R PL+ICV + +I ++A
Sbjct: 26 EELLNGKIIICGTDTLYGISANALDENAVKKVYKIKKRDFNKPLSICVKNKEEIEKYAYV 85
Query: 92 DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGL---ESIGVRVPDSNFVRVIARGLE 148
+ L ++D LPGP+T++L + K + P + + IG+R+PD +R ++
Sbjct: 86 NDLAKKIIDEFLPGPLTIILKK-------KPIIPDIVAKDYIGIRIPDEAIIRELSI--- 135
Query: 149 SALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGG 184
L TSAN++G+ S +V++ + ++ V D G
Sbjct: 136 VPLTTTSANISGEKSPTAVEEINPEILKKVDYVVDIG 172
>gi|419859300|ref|ZP_14381955.1| translation factor SUA5 [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410496849|gb|EKP88328.1| translation factor SUA5 [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 337
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 3/202 (1%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
LV +E EA + +G V+A PT+T+YG DA +AV +++ K R H +PL +
Sbjct: 3 LVLKTSEKAIAEAANIMASGGVVAFPTETVYGIGADATKRDAVEKVFAAKKRPHDNPLIV 62
Query: 78 CVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
V + +RFA D L+++ PG +T++L + L ++ GL + R P +
Sbjct: 63 TVSNAEMASRFAKLDWRAEKLIENFWPGSLTMILPLIDQDILPDNVTAGLLTAAFRNPKN 122
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVV 196
+ R + L + + SANL+ +PSS + + ++ R V D G G ST+V
Sbjct: 123 DVTRHLITLLNNPIVGPSANLSTKPSSTTAEHVLHDMDGRIDAVIDDGPTEIG-VESTIV 181
Query: 197 DLTRLGKFKILRPGSAKEETIA 218
DL+ + + ILRPG+ + ++
Sbjct: 182 DLS-VKQATILRPGAVTADQVS 202
>gi|218516174|ref|ZP_03513014.1| probable translation factor protein [Rhizobium etli 8C-3]
Length = 185
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 82/162 (50%), Gaps = 2/162 (1%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+A E A AL G IA+PT+T+YG A DA + A+ RIYE KGR +PL + D++
Sbjct: 22 QAALEAASTALADGFAIAMPTETVYGLAADATNPAAITRIYETKGRPRFNPLICHMADLA 81
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
A D L L ++ PGP+T+VL S + GL+S+GVRVP F +
Sbjct: 82 MAEHHAAFDPLSRALAEAFWPGPLTLVLPLKPESPIHSLATAGLDSVGVRVP-KGFAGAL 140
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGG 184
LA SAN +G S+ S E +L + + D G
Sbjct: 141 IGAFGRPLAAPSANTSGAISATSAAHVEADLGAKIPLILDAG 182
>gi|241203341|ref|YP_002974437.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857231|gb|ACS54898.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 324
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G IA+PT+T+YG A DA + A+ RIYE KGR +PL + D++ A D +
Sbjct: 25 GFAIAIPTETVYGLAADATNPAAITRIYETKGRPRFNPLICHMADLAMAEEHAEFDPVSR 84
Query: 97 GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSA 156
L + PGP+T+VL S++ GL+S+G+RVP F + LA SA
Sbjct: 85 ALARAFWPGPLTLVLPLKPQSSIHSLAIAGLDSVGIRVP-KGFAGALIGAFGRPLAAPSA 143
Query: 157 NLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
N +G S+ S E +L R + D G PS + + G+ ++LRPG
Sbjct: 144 NTSGGVSATSAAHVEADLGARIPLILDAG--PSAVGVESTIVKAEGGRLRLLRPG 196
>gi|297183981|gb|ADI20101.1| putative translation factor (sua5) [uncultured alpha
proteobacterium EB080_L06A09]
Length = 318
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 101/191 (52%), Gaps = 3/191 (1%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A + L++G ++A PT+T+YG DA ++ AV++IY K R +PL + V ++ +
Sbjct: 14 DTASKILQSGGLVAFPTETVYGLGADALNNNAVSKIYAAKKRPTFNPLIVHVLNLETAQK 73
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
FA+ D L + PGP+T+V +NL K + GLE++ RVP R + +
Sbjct: 74 FAIFDEDSLLLANKFWPGPLTIVAPIKADANLSKLITAGLETVAFRVPSHPVARKLLKEF 133
Query: 148 ESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ +A SAN +G SS + +N L R + +GG G ST++ L++ G+ I
Sbjct: 134 DGPVAAPSANPSGSISSTNAIHVKNGLNGRIQAILNGGKCNVGLE-STII-LSKSGECSI 191
Query: 207 LRPGSAKEETI 217
LR G E I
Sbjct: 192 LRSGGIPESEI 202
>gi|423451425|ref|ZP_17428278.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG5X1-1]
gi|401145754|gb|EJQ53276.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG5X1-1]
Length = 346
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+E KGR +PL + +G S ++
Sbjct: 22 KEAARLLRENEAVAFPTETVYGLGANAMDDEAIAKIFEAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R + + + GL ++GVR+PD +
Sbjct: 81 -GIVREIPPVAEKLMEHFWPGPLTIILPR--KKGISERVTAGLNTVGVRMPDHPVALALL 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSEVP 196
Query: 204 FKILRPGS-AKEETIAILEKHSL 225
ILRPG KE+ A++ SL
Sbjct: 197 -TILRPGGITKEQLEAVIGNVSL 218
>gi|288574653|ref|ZP_06393010.1| Sua5/YciO/YrdC/YwlC family protein [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570394|gb|EFC91951.1| Sua5/YciO/YrdC/YwlC family protein [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 322
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 7/195 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A+ LK+G ++ PT+T+YG D +AV+ I+E KGR +PL + VGD + +
Sbjct: 18 DRAVSILKSGGLVGFPTETVYGLGADGLDGKAVSGIFEAKGRPSDNPLILHVGDPESVRK 77
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A D ++ +L PGP+T+VL + + GL+++GVR+P + +
Sbjct: 78 IAKVDDRADMIMKNLWPGPLTLVLP--ALPIVPPEVTAGLDTVGVRMPSHPVALALLQAC 135
Query: 148 ESALALTSANLTGQPSSV-SVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+A SAN +G+PS +V +L +R + DGG G STV+D+T G+ +
Sbjct: 136 PFPVAAPSANTSGRPSPTDAVTVARDLDDRVDLIIDGGATEVGLE-STVLDVT--GEVPV 192
Query: 207 -LRPGSAKEETIAIL 220
LRPG E +A L
Sbjct: 193 LLRPGGLSVEVLADL 207
>gi|47096963|ref|ZP_00234539.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes str.
1/2a F6854]
gi|254828117|ref|ZP_05232804.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes FSL
N3-165]
gi|254913441|ref|ZP_05263453.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254937822|ref|ZP_05269519.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes F6900]
gi|386044843|ref|YP_005963648.1| translation factor [Listeria monocytogenes 10403S]
gi|386048208|ref|YP_005966540.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes J0161]
gi|386054730|ref|YP_005972288.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes Finland
1998]
gi|404411784|ref|YP_006697372.1| translation factor, SUA5 type [Listeria monocytogenes SLCC5850]
gi|47014673|gb|EAL05630.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes serotype
1/2a str. F6854]
gi|258600502|gb|EEW13827.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes FSL
N3-165]
gi|258610426|gb|EEW23034.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes F6900]
gi|293591448|gb|EFF99782.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|345535199|gb|AEO04640.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes J0161]
gi|345538077|gb|AEO07517.1| translation factor [Listeria monocytogenes 10403S]
gi|346647381|gb|AEO40006.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes Finland
1998]
gi|404231610|emb|CBY53014.1| translation factor, SUA5 type [Listeria monocytogenes SLCC5850]
Length = 345
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 9/200 (4%)
Query: 22 ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
+ +A +EA + L+ G+ +A PT+T+YG DA + AV +IYE KGR +PL + +
Sbjct: 13 SNQAIFQEAAKLLQGGECVAFPTETVYGLGADATNQAAVQKIYEAKGRPSDNPLIVHIAR 72
Query: 82 VSDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
+++F + P L++ PGP+TV+L + S L +++ GL ++GVR+P+
Sbjct: 73 REQMDQFVAS--YPAKAIQLMEKFWPGPLTVILPLKKDS-LATNVSAGLSTVGVRMPEHP 129
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
+ +A SAN +G+PS + E+L + A + DGG G STV+D
Sbjct: 130 VSLALIGTANIPIAAPSANRSGKPSPTTASHVIEDLDGKIAGIIDGGATGVGLE-STVID 188
Query: 198 LTRLGKFKILRPGSAKEETI 217
+ L ILRPG +E I
Sbjct: 189 CS-LEIPIILRPGGVTKEQI 207
>gi|16804579|ref|NP_466064.1| hypothetical protein lmo2541 [Listeria monocytogenes EGD-e]
gi|255026494|ref|ZP_05298480.1| hypothetical protein LmonocytFSL_09443 [Listeria monocytogenes FSL
J2-003]
gi|255028536|ref|ZP_05300487.1| hypothetical protein LmonL_03806 [Listeria monocytogenes LO28]
gi|284802979|ref|YP_003414844.1| hypothetical protein LM5578_2736 [Listeria monocytogenes 08-5578]
gi|284996120|ref|YP_003417888.1| hypothetical protein LM5923_2685 [Listeria monocytogenes 08-5923]
gi|386051512|ref|YP_005969503.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes FSL
R2-561]
gi|404285034|ref|YP_006685931.1| translation factor, SUA5 type [Listeria monocytogenes SLCC2372]
gi|404414559|ref|YP_006700146.1| translation factor, SUA5 type [Listeria monocytogenes SLCC7179]
gi|405759591|ref|YP_006688867.1| translation factor, SUA5 type [Listeria monocytogenes SLCC2479]
gi|16412029|emb|CAD00619.1| lmo2541 [Listeria monocytogenes EGD-e]
gi|284058541|gb|ADB69482.1| hypothetical protein LM5578_2736 [Listeria monocytogenes 08-5578]
gi|284061587|gb|ADB72526.1| hypothetical protein LM5923_2685 [Listeria monocytogenes 08-5923]
gi|346425358|gb|AEO26883.1| Sua5/YciO/YrdC/YwlC family protein [Listeria monocytogenes FSL
R2-561]
gi|404234536|emb|CBY55939.1| translation factor, SUA5 type [Listeria monocytogenes SLCC2372]
gi|404237473|emb|CBY58875.1| translation factor, SUA5 type [Listeria monocytogenes SLCC2479]
gi|404240258|emb|CBY61659.1| translation factor, SUA5 type [Listeria monocytogenes SLCC7179]
Length = 345
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 9/200 (4%)
Query: 22 ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
+ +A +EA + L+ G+ +A PT+T+YG DA + AV +IYE KGR +PL + +
Sbjct: 13 SNQAIFQEAAKLLQGGECVAFPTETVYGLGADATNQAAVQKIYEAKGRPSDNPLIVHIAR 72
Query: 82 VSDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
+++F + P L++ PGP+TV+L + S L +++ GL ++GVR+P+
Sbjct: 73 REQMDQFVAS--YPAKAIQLMEKFWPGPLTVILPLKKDS-LATNVSAGLSTVGVRMPEHP 129
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
+ +A SAN +G+PS + E+L + A + DGG G STV+D
Sbjct: 130 VSLALIGTANIPIAAPSANRSGKPSPTTASHVIEDLDGKIAGIIDGGATGVGLE-STVID 188
Query: 198 LTRLGKFKILRPGSAKEETI 217
+ L ILRPG +E I
Sbjct: 189 CS-LEIPIILRPGGVTKEQI 207
>gi|374854869|dbj|BAL57740.1| hypothetical conserved protein [uncultured candidate division OP1
bacterium]
gi|374856214|dbj|BAL59068.1| translation factor [uncultured candidate division OP1 bacterium]
Length = 346
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 10/201 (4%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
PA +A E A ++ G ++A PT+T+YG DA + +AV +I+ K R PL + +
Sbjct: 7 PADDAALERAAHVIRAGGLVAFPTETVYGLGADALNPDAVRKIFIAKERPSDDPLIVHIA 66
Query: 81 DVSDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
V ++ + ++P H L + PGP+T+VL + E + GL+++ VR P
Sbjct: 67 SVEQLS--LLVRYIPPKAHTLTERFWPGPLTLVLPKAE--RVPAVTTGGLDTVAVRAPAH 122
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVV 196
R + +A SAN G+PS + +E+L R + DGG P G STV+
Sbjct: 123 PVARALIERSGCPIAAPSANRFGRPSPTTASHVWEDLHGRIDLILDGGPTPIG-VESTVL 181
Query: 197 DLTRLGKFKILRPGSAKEETI 217
DLT+ ILRPG E +
Sbjct: 182 DLTQEPPM-ILRPGGVTLEEL 201
>gi|448445150|ref|ZP_21590205.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum saccharovorum DSM
1137]
gi|445685456|gb|ELZ37810.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum saccharovorum DSM
1137]
Length = 199
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 6/169 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
AI+A G ++ PT+T+YG DA AV R++E+KGR+ ++PL++ V R+
Sbjct: 11 AIEAATDGDLVVYPTETVYGLGGDALDPAAVERVFELKGRERSNPLSLGVPSADAALRYT 70
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ LPGPVTV++ RG++ + +L G + +G+RVPD R + G
Sbjct: 71 NPTEFAVAFARAFLPGPVTVIVERGDA--VPDALTAGRDRVGIRVPDHAVARELL-GETG 127
Query: 150 ALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVD 197
L TSAN++G+ S D ++ + E A V D G P STVVD
Sbjct: 128 PLTATSANVSGRGSVTHPDDLDDRIREGVAAVVDDGETPGTE--STVVD 174
>gi|170693448|ref|ZP_02884607.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia graminis C4D1M]
gi|170141603|gb|EDT09772.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia graminis C4D1M]
Length = 359
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
P + A E A L G ++A PT+T+YG DA + +AV RIY KGR P+ + +
Sbjct: 25 PVSAAQIEHAAALLDAGGLVAFPTETVYGLGGDAENPDAVARIYAAKGRPANHPVIVHLA 84
Query: 81 DVSDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
D N + +HLP L+D+ PGP+T++L R ++ + +++ G +S+G+R P
Sbjct: 85 PQGDPNYW--VEHLPQEAQRLIDAFWPGPLTLILKR--AARIPAAVSGGQDSVGLRCPSH 140
Query: 138 NFVRVIARGLES------ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRA 191
+ + S +A SAN G S + + + + V DGG G
Sbjct: 141 PVAQALLEAFSSLRAGHGGVAAPSANRFGHVSPTTAQHVRDEFGSAIHVLDGGASDVG-I 199
Query: 192 GSTVVDLTRLGKFKILRPGSAKEETIA 218
ST+VDL+R G +LRPG + IA
Sbjct: 200 ESTIVDLSR-GFPALLRPGRVTPQDIA 225
>gi|268610025|ref|ZP_06143752.1| Sua5/YciO/YrdC/YwlC family protein [Ruminococcus flavefaciens FD-1]
Length = 337
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 110/217 (50%), Gaps = 10/217 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
+EA +A + +K G ++ +PT+T+YG DA + AV I+ KGR +PL + + D
Sbjct: 9 SEADLLKAAKLIKDGNIVGIPTETVYGLGADASNEAAVRNIFAAKGRPADNPLIVHLADF 68
Query: 83 SDINRFAVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
S ++ + L + L + PGP+T+VL + +S + S GL+++G+RVP +
Sbjct: 69 SHAVKYTSSIPQLAYRLAERFCPGPLTMVLPKNDSIPMVTS--GGLDTVGIRVPSHPVMH 126
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTR 200
I +A SAN +G PS S N + + A + DGG G STV+ +
Sbjct: 127 RIIELSGCPIAAPSANTSGYPSPTSAAHVMNDMNGKVAAIVDGGESEFG-VESTVIAIEG 185
Query: 201 LGKFKILRPGSAKEETI-----AILEKHSLVEEPAAG 232
+ILRPG E + ++ H+++ E AAG
Sbjct: 186 ESTVRILRPGCITREMLLELCDEVIIDHAILNELAAG 222
>gi|242399386|ref|YP_002994810.1| Sua5 superfamily-related protein [Thermococcus sibiricus MM 739]
gi|242265779|gb|ACS90461.1| Sua5 superfamily-related protein [Thermococcus sibiricus MM 739]
Length = 341
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 10/192 (5%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + +K K++A PT+T+YG DA + +AV +I++ KGR +PL I + + I +
Sbjct: 19 AARFIKESKLVAFPTETVYGLGADALNEDAVRKIFQAKGRPPDNPLIIHIANFEQI--YE 76
Query: 90 VTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ +P L PGP+T+VL + + GLE++ +R+PD + +
Sbjct: 77 LAREVPETAKILAQRFWPGPLTLVLPK--KDEVPYVTTGGLETVAIRMPDHEIALALIQS 134
Query: 147 LESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+ +A SAN++G+PS +++ ++ + + C+ DGG G STVVDLT
Sbjct: 135 SDRPIAAPSANISGKPSPTLAEHVVDDFYGKIECIIDGGETKIG-VESTVVDLTTHPPM- 192
Query: 206 ILRPGSAKEETI 217
+LRPG E I
Sbjct: 193 LLRPGGLPLEEI 204
>gi|430751986|ref|YP_007214894.1| Sua5/YciO/YrdC/YwlC family protein [Thermobacillus composti KWC4]
gi|430735951|gb|AGA59896.1| Sua5/YciO/YrdC/YwlC family protein [Thermobacillus composti KWC4]
Length = 348
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 106/207 (51%), Gaps = 5/207 (2%)
Query: 14 NKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTS 73
N+ + PA E EA + L+ G ++A PT+T+YG DA + +AV +++E KGR +
Sbjct: 2 NRETKLWPADETAVAEAARTLREGGIVAFPTETVYGLGADARNPQAVRQVFEAKGRPSDN 61
Query: 74 PLAICVGDVSDINRFAVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGV 132
PL + + D ++ + +P L+++ PGP+T+VL + GL+++ V
Sbjct: 62 PLIVHIADREQLDELVLPFGGIPARLMEAFWPGPLTIVLPV-RPGAAAPQVTAGLDTVAV 120
Query: 133 RVPDSNFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRA 191
R+P + +A SAN +G+PS +++ E+L R V DGG G
Sbjct: 121 RMPAHPVALRLIAAAGCPVAAPSANRSGRPSPTLAAHVMEDLAGRIDGVVDGGPAEVGLE 180
Query: 192 GSTVVDLTRLGKFKILRPGSAKEETIA 218
STVV + + ++LRPG E +A
Sbjct: 181 -STVV-MVEDKRIRVLRPGGVTREALA 205
>gi|315641823|ref|ZP_07896827.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus italicus DSM
15952]
gi|315482498|gb|EFU73037.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus italicus DSM
15952]
Length = 346
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A ++ G+++A PT+T+YG A + +AV ++Y++KGR +PL + V +
Sbjct: 12 KQAAHYIQQGELVAFPTETVYGLGASALNPQAVKKVYQVKGRPSDNPLIVHVTSFEQVKE 71
Query: 88 FAVTDH-LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ H L L+ + PGP+T++L + + + + GL ++ R+PD + R
Sbjct: 72 YIQESHPLAEVLVQTFWPGPLTIILPI-KPNTFDTVVTGGLATVAFRMPDQALTLELIRQ 130
Query: 147 LESALALTSANLTGQPSSVS----VKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
L SANL+G PS + + DFE+ V DGG G STV+DL+
Sbjct: 131 AGVPLVGPSANLSGHPSPTTAEHVIHDFEH---SIKGVLDGGPTKIG-VESTVLDLSDPN 186
Query: 203 KFK-ILRPGSAKEETI 217
K ILRPG+ +E +
Sbjct: 187 KPPMILRPGAVTKEML 202
>gi|124486054|ref|YP_001030670.1| translation factor SUA5 [Methanocorpusculum labreanum Z]
gi|124363595|gb|ABN07403.1| translation factor SUA5 [Methanocorpusculum labreanum Z]
Length = 198
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 12/199 (6%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++ P E+ E+A++ L ++ PT+T+YG DA S AV ++YE K R P+++
Sbjct: 1 MITPTEESRIEKAVRVLSRDGLVVYPTETVYGLGADALSDTAVIKVYEAKQRPLGKPISV 60
Query: 78 CVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
V D+ I A + LPGPVT+VL + L L+ G +IG+R PD
Sbjct: 61 AVSDIEMIYGIADVSPFAERFISKFLPGPVTIVLPV--KNCLPGDLSGGTGTIGIRYPDH 118
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVD 197
+ + + TSAN++G+ S VSV + + DGGVLP STVV+
Sbjct: 119 TLALELISMFDCPITATSANISGEISPVSVDQVNVPHDY---LLDGGVLPG--IPSTVVN 173
Query: 198 L-TRLGKFKILRPGSAKEE 215
L TR I RPG+ ++
Sbjct: 174 LETR----NIERPGAMLDD 188
>gi|261409693|ref|YP_003245934.1| Sua5/YciO/YrdC/YwlC family protein [Paenibacillus sp. Y412MC10]
gi|261286156|gb|ACX68127.1| Sua5/YciO/YrdC/YwlC family protein [Paenibacillus sp. Y412MC10]
Length = 365
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 107/206 (51%), Gaps = 7/206 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EA Q L G +A PT+T+YG DA ++EAV RI+ KGR +PL + + +++ ++
Sbjct: 24 HEAGQVLAQGGTVAFPTETVYGLGADAGNTEAVERIFAAKGRPSDNPLIVHISELAQLDG 83
Query: 88 FA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ L+ S PGP+++VL + + + GL+++ VR+PD +
Sbjct: 84 LVQQVNETERALMASFWPGPLSLVLPV-KPGAVSPRVTAGLDTVAVRMPDHRVALALISA 142
Query: 147 LESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGKF 204
LA SAN +G+PS +++ E+L V DGG P+G STVV + G
Sbjct: 143 AGCPLAAPSANRSGRPSPTLASHVLEDLAGAIDGVLDGG--PAGVGVESTVVQVGEDGAV 200
Query: 205 KILRPGSAKEETIAILEKHSLVEEPA 230
+LRPG E +A + S+ ++PA
Sbjct: 201 TVLRPGGVTAEQLAAVAA-SVRQDPA 225
>gi|334139397|ref|ZP_08512789.1| Sua5/YciO/YrdC/YwlC family protein [Paenibacillus sp. HGF7]
gi|333602210|gb|EGL13641.1| Sua5/YciO/YrdC/YwlC family protein [Paenibacillus sp. HGF7]
Length = 361
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA L G+ +A PT+T+YG DA +S AV IY KGR +PL + + D S ++ F
Sbjct: 29 EAAGLLVQGETVAFPTETVYGLGADATNSAAVEGIYRAKGRPSDNPLIVHIADRSQMDAF 88
Query: 89 AVTDHLP----HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
A + P L+D+ PGP+TV++ + + + GL ++GVR+PD +
Sbjct: 89 A--EGAPAEPLRRLMDAFWPGPLTVIVPV-RAGAVSPLVTAGLSTVGVRIPDHPVALALL 145
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRA-GSTVVDLTRLG 202
R +A SAN +G+PS + ++L R + DGG P+G STVV+ G
Sbjct: 146 RAAGCPVAAPSANSSGRPSPTMAEHVADDLGGRIGGIVDGG--PTGVGVESTVVEWAS-G 202
Query: 203 KFKILRPGSAKEETIAILEKHSLVEEP 229
ILRPG E + V EP
Sbjct: 203 AVYILRPGGVTAEQLREALSDVPVREP 229
>gi|255016728|ref|ZP_05288854.1| hypothetical protein LmonF_00646 [Listeria monocytogenes FSL
F2-515]
Length = 344
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 9/200 (4%)
Query: 22 ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
+ +A +EA + L+ G+ +A PT+T+YG DA + AV +IYE KGR +PL + +
Sbjct: 12 SNQAIFQEAAKLLQGGECVAFPTETVYGLGADATNQAAVQKIYEAKGRPSDNPLIVHIAR 71
Query: 82 VSDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
+++F + P L++ PGP+TV+L + S L +++ GL ++GVR+P+
Sbjct: 72 REQMDQFVAS--YPAKAIQLMEKFWPGPLTVILPLKKDS-LATNVSAGLSTVGVRMPEHP 128
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
+ +A SAN +G+PS + E+L + A + DGG G STV+D
Sbjct: 129 VSLALIGTANIPIAAPSANRSGKPSPTTASHVIEDLDGKIAGIIDGGATGVGLE-STVID 187
Query: 198 LTRLGKFKILRPGSAKEETI 217
+ L ILRPG +E I
Sbjct: 188 CS-LEIPIILRPGGVTKEQI 206
>gi|167755050|ref|ZP_02427177.1| hypothetical protein CLORAM_00554 [Clostridium ramosum DSM 1402]
gi|167705100|gb|EDS19679.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium ramosum DSM 1402]
Length = 201
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 103/192 (53%), Gaps = 7/192 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EE + + +V+A PT+T++G S +A++ +YE+K R +++ + DI +
Sbjct: 12 EEVAKLVSDSRVVAFPTETVFGLGVKFGSHQALDALYELKHRDKGKAISMMISKAEDIEK 71
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+A D L+ + +PG +T++L + +++ L++IG+R+PD FV +
Sbjct: 72 YAYVDETAKKLIAAFMPGMITIILKK--RPHIDDYFTASLDTIGIRIPDDPFVLSLLDK- 128
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWE-RCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ +TSANL+G+ S V K ++ + + G + + ST+VDL++ GK +I
Sbjct: 129 TGPMLVTSANLSGENSLVDDKAVMKVFHGKIPLIVKGESI--SKEASTIVDLSK-GKVEI 185
Query: 207 LRPGSAKEETIA 218
LR G +E IA
Sbjct: 186 LRLGDISKEQIA 197
>gi|337744397|ref|YP_004638559.1| hypothetical protein KNP414_00038 [Paenibacillus mucilaginosus
KNP414]
gi|336295586|gb|AEI38689.1| hypothetical protein KNP414_00038 [Paenibacillus mucilaginosus
KNP414]
Length = 359
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 104/219 (47%), Gaps = 12/219 (5%)
Query: 1 MAFSLENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAV 60
M+ + + +V+ E A P T A E LK G +A PT+T+YG DA S+EAV
Sbjct: 2 MSMTTKQWKVTAEEAA----PETLA---EPASLLKKGGTVAFPTETVYGLGADARSTEAV 54
Query: 61 NRIYEIKGRKHTSPLAICVGDVSDINRF-AVTDHLPHGLLDSLLPGPVTVVLSRGESSNL 119
++ KGR +PL + + D S + A + LLD+ PGP+TVVL L
Sbjct: 55 AAVFAAKGRPSDNPLIVHIADRSQLEELTAPPEEAVSRLLDAFWPGPLTVVLP-ARPGVL 113
Query: 120 EKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCA 178
+ GL ++GVR+PD + +A SAN +G+PS E+L R
Sbjct: 114 SPLVTAGLSTVGVRMPDHPVALALIAAAGCPVAAPSANRSGRPSPTRASHVLEDLGGRIG 173
Query: 179 CVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETI 217
V DGG G STVV+ G ILRPG + +
Sbjct: 174 GVVDGGEAGVGLE-STVVEYAG-GALHILRPGGVTQAQL 210
>gi|237735225|ref|ZP_04565706.1| conserved hypothetical protein [Mollicutes bacterium D7]
gi|365832298|ref|ZP_09373834.1| Sua5/YciO/YrdC/YwlC family protein [Coprobacillus sp. 3_3_56FAA]
gi|374626785|ref|ZP_09699196.1| Sua5/YciO/YrdC/YwlC family protein [Coprobacillus sp. 8_2_54BFAA]
gi|229380970|gb|EEO31061.1| conserved hypothetical protein [Coprobacillus sp. D7]
gi|365260621|gb|EHM90570.1| Sua5/YciO/YrdC/YwlC family protein [Coprobacillus sp. 3_3_56FAA]
gi|373914032|gb|EHQ45866.1| Sua5/YciO/YrdC/YwlC family protein [Coprobacillus sp. 8_2_54BFAA]
Length = 201
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 103/192 (53%), Gaps = 7/192 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EE + + +V+A PT+T++G S +A++ +YE+K R +++ + DI +
Sbjct: 12 EEVAKLVSDSRVVAFPTETVFGLGVKFGSHQALDALYELKHRDKGKAISMMISKAEDIEK 71
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+A D L+ + +PG +T++L + +++ L++IG+R+PD FV +
Sbjct: 72 YAYVDETAKKLIAAFMPGMITIILKK--RPHIDDYFTASLDTIGIRIPDDPFVLSLLDK- 128
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWE-RCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ +TSANL+G+ S V K ++ + + G + + ST+VDL++ GK +I
Sbjct: 129 TGPMLVTSANLSGENSLVDDKAVMKVFHGKIPLIVKGESI--SKKASTIVDLSK-GKVEI 185
Query: 207 LRPGSAKEETIA 218
LR G +E IA
Sbjct: 186 LRLGDISKEQIA 197
>gi|383753170|ref|YP_005432073.1| putative translation factor SUA5 family protein [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381365222|dbj|BAL82050.1| putative translation factor SUA5 family protein [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 353
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 112/202 (55%), Gaps = 11/202 (5%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
++ G+V+A PT+T+YG + + A +IY+ KGR +PL + V + S I++ A
Sbjct: 25 IRQGEVVAFPTETVYGLGANGLDAAACRKIYQAKGRPSDNPLILHVANRSMIDQVAA--R 82
Query: 94 LP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA 150
+P L+ + PGP+T++L R + + + + GL ++GVR+P+ + R +
Sbjct: 83 IPEKAEKLIAAFCPGPITLILPR--KAIVPEQITGGLSTVGVRMPEHDVARALIAAAGVP 140
Query: 151 LALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRP 209
+A SAN++G+PS + + ++ + + DGG G ST+VD T K ILRP
Sbjct: 141 IAAPSANISGRPSPTTAESVLVDMEGKIPMILDGGACDFG-VESTIVDATG-EKAVILRP 198
Query: 210 GSAKEETI-AILEKHSLVEEPA 230
G+ +E + +L + S+V +PA
Sbjct: 199 GAITKEMLEEVLGEGSVVIDPA 220
>gi|444308762|ref|ZP_21144404.1| Sua5/YciO/YrdC/YwlC family protein [Ochrobactrum intermedium M86]
gi|443487810|gb|ELT50570.1| Sua5/YciO/YrdC/YwlC family protein [Ochrobactrum intermedium M86]
Length = 323
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 8/204 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL V ++ R+
Sbjct: 14 RAVEVLRRGGLVAIPTETVYGLAADASNGEGVAGIFAAKGRPQFNPLIAHVSGIAMAARY 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVIA 144
D L L + PGP+T+VL + + + ++P GL+++ +R+P VR I
Sbjct: 74 VTFDALSRKLAEMFWPGPLTIVLPLKDRQDAGRPIHPLVTAGLQTLAIRMPLGR-VRDII 132
Query: 145 RGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
GL+S +A SAN +G+ S S +L R + D G P G + + +
Sbjct: 133 EGLDSPVAAPSANTSGRISPTSASAVAGDLGNRLDLILDAG--PCGVGVESTIVKVDGNR 190
Query: 204 FKILRPGSAKEETIAILEKHSLVE 227
+LRPG E I + LV
Sbjct: 191 VHLLRPGGLAAEEIEAVIGEKLVR 214
>gi|222825112|dbj|BAH22269.1| Sua5/YciO/YrdC/YwlC family protein [Wolbachia endosymbiont of Cadra
cautella]
Length = 195
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
E I A+K + PT+T+Y AC+A E++ +IY IK R PL++ V ++ +
Sbjct: 4 EVINAIKNNLLACFPTETVYALACNALGKESIEKIYRIKKRSQNKPLSVFVSNIDSLINI 63
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A L++ PGP+T +L ++S L +SIG+R+PD I L+
Sbjct: 64 AKVKEEYIDLINYFSPGPMTYILPLQDNSILPNEFFK--DSIGIRIPDHPIAISILNELK 121
Query: 149 SALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ + TS N++G+ S +D +++ + + V + L SG ST++DLT K K+L
Sbjct: 122 TPVVATSINISGEKSICKARDIPQSIKQHLSAVIEDDELVSG-IESTIIDLTG-DKIKVL 179
Query: 208 RPGSAKEETI 217
R G +TI
Sbjct: 180 RKGKISLQTI 189
>gi|333980778|ref|YP_004518723.1| Sua5/YciO/YrdC/YwlC family protein [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333824259|gb|AEG16922.1| Sua5/YciO/YrdC/YwlC family protein [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 352
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 100/190 (52%), Gaps = 14/190 (7%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
L+ G ++A PT+T+YG +A AV RI+E+KGR +PL + V D R
Sbjct: 27 LRQGGLVAFPTETVYGLGANALDGLAVARIFEVKGRPQDNPLIVHVADRETACRLVC--R 84
Query: 94 LPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA 150
+P G L+D+ PGP+T+VL + + + + GL+S+G+R+PD +
Sbjct: 85 VPAGAGKLMDAFWPGPLTLVLP--AAPVVPRQVTAGLDSVGIRMPDHQVALALIAAAGVP 142
Query: 151 LALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGKFK-IL 207
+A SANL+G+PS + ++L R V D G P+G STV+DLT G IL
Sbjct: 143 VAAPSANLSGRPSPTTAGHVLQDLNGRIEVVLDAG--PAGVGLESTVLDLT--GDVPVIL 198
Query: 208 RPGSAKEETI 217
RPG E +
Sbjct: 199 RPGGITREEL 208
>gi|347751866|ref|YP_004859431.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus coagulans 36D1]
gi|347584384|gb|AEP00651.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus coagulans 36D1]
Length = 353
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 9/201 (4%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
P EA Q LK + +A PT+T+YG DA S EAV++I++ KGR +PL + +
Sbjct: 15 PGAYPQLAEAAQLLKEKQTVAFPTETVYGLGADATSDEAVDKIFKAKGRPSDNPLIVHIA 74
Query: 81 DVSDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
+ + A + +P L+ + PGP+T+V+ + + L + + GL+++G+R+P
Sbjct: 75 EEKQLEELA--EEIPETAKVLMKAFWPGPLTLVV-KVKKGALSEKVTAGLDTVGIRMPRH 131
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVV 196
+ R +A SAN +G+PS + E+L + A + DGG G STV+
Sbjct: 132 PVALALIRMSGLPIAAPSANRSGKPSPTLARHVREDLAGKIAGIVDGGETGVG-VESTVL 190
Query: 197 DLTRLGKFKILRPGSAKEETI 217
D+T ILRPG +E +
Sbjct: 191 DVTAEVPV-ILRPGGVTKEQL 210
>gi|258512736|ref|YP_003186170.1| Sua5/YciO/YrdC/YwlC family protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257479462|gb|ACV59781.1| Sua5/YciO/YrdC/YwlC family protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 360
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E Q+L+ G ++A PT+T+YG +A EAV RI+ K R +PL + + D + + R
Sbjct: 20 REPAQSLRRGGLVAFPTETVYGLGANALEEEAVRRIFAAKERPRDNPLIVHIADDAKL-R 78
Query: 88 FAVTDHLP-H----GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ ++ P H L+ + PGP+T++L G + L S++PG +GVR+PD R
Sbjct: 79 DVIDENQPLHEDAVRLMRAFWPGPLTLLLPAG--ARLAPSVHPGQPLVGVRMPDHPVARA 136
Query: 143 IARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ +A SAN +G+PS + D +L R + DGG P G STV+ L
Sbjct: 137 LIAEAGVPVAAPSANRSGRPSPTTPDDVVADLDGRIDWLVDGGPCPIG-VESTVL-LLEP 194
Query: 202 GKFKILRPGSAKEETIAILEKHSLVEEP 229
+ILRPG +E IA S+++ P
Sbjct: 195 DCARILRPGGVTQEMIA-----SVIDRP 217
>gi|71083313|ref|YP_266032.1| Sua5/YciO/YrdC family protein [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062426|gb|AAZ21429.1| Sua5/YciO/YrdC family protein [Candidatus Pelagibacter ubique
HTCC1062]
Length = 310
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 22 ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
+ +++ ++A + L I VPT+T+YG A +A + AV +IY +K R +PL + D
Sbjct: 3 SNQSNIKKAKKYLDKNYCIGVPTETVYGLAANAYKNSAVKKIYNLKKRPKNNPLIVHYHD 62
Query: 82 VSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
+ + + + + L PGP+T VL ++S + K + +S+ VR P +
Sbjct: 63 IDSLKKDCLINDNFIKLYKKFSPGPITYVLQLKKNSKISKYVTNNKKSLAVRFPKHTIFK 122
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
+ + L+ LA SAN+T + S+V KD E + + DGG G ST+V+LT
Sbjct: 123 NLLKQLDYPLAAPSANITTKVSAVKAKDVKEEFGNKIKYILDGGTCAIG-IESTIVNLT- 180
Query: 201 LGKFKILRPG 210
K ILR G
Sbjct: 181 -AKPTILRLG 189
>gi|265983561|ref|ZP_06096296.1| Sua5/YciO/YrdC/YwlC family protein [Brucella sp. 83/13]
gi|306839897|ref|ZP_07472695.1| Sua5/YciO/YrdC/YwlC family protein [Brucella sp. NF 2653]
gi|264662153|gb|EEZ32414.1| Sua5/YciO/YrdC/YwlC family protein [Brucella sp. 83/13]
gi|306405083|gb|EFM61364.1| Sua5/YciO/YrdC/YwlC family protein [Brucella sp. NF 2653]
Length = 323
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL V ++ R+
Sbjct: 14 RAVEVLRRGGLVAIPTETVYGLAADAANGEGVAGIFAAKGRPQFNPLIAHVDGIAMAGRY 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVIA 144
D + L ++ PGP+T+VL E + E+ ++P GL ++ VR+P VR +
Sbjct: 74 VAFDPVSRRLAEAFWPGPLTIVLPLKERQDTERPIHPLVTAGLSTLAVRMPHGR-VRDVI 132
Query: 145 RGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
L+S +A SAN +G+ S S +L R + D G P G + + +
Sbjct: 133 TALDSPVAAPSANTSGRISPTSAASVAGDLGGRIDLILDAG--PCGVGVESTIVKVDGDQ 190
Query: 204 FKILRPGS-AKEETIAIL 220
+LRPG A EE A L
Sbjct: 191 VHLLRPGGLAAEEIEAFL 208
>gi|395791337|ref|ZP_10470795.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella alsatica IBS 382]
gi|395408700|gb|EJF75310.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella alsatica IBS 382]
Length = 321
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 4/194 (2%)
Query: 25 AHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSD 84
A +EA+ LK G ++A+PT+T+YG A DA + +AV+ I+ K R +PL V +
Sbjct: 10 ASIKEAVALLKQGGLVALPTETVYGLAGDATNGKAVSSIFSTKKRPQFNPLIAHVSSIKM 69
Query: 85 INRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
R+ D L L++ PGP+T+VL N+ GL+++ VR P+S F +I
Sbjct: 70 AERYVEIDFLSRRLMEIFWPGPLTLVLPLRAQHNIHPLTTCGLDTLAVRFPNSCFAEII- 128
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ LA SAN +G+ S S + +L E + DGG G ST++ +
Sbjct: 129 QCFGRPLAAPSANQSGRLSPTSAEAVLASLGETVPLILDGGFCKIG-IESTIIKVCDESI 187
Query: 204 FKILRPGSAKEETI 217
+ +LRPG E I
Sbjct: 188 Y-LLRPGGLAAEEI 200
>gi|295677567|ref|YP_003606091.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia sp. CCGE1002]
gi|295437410|gb|ADG16580.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia sp. CCGE1002]
Length = 350
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
P + A E A L G ++A PT+T+YG DA + +AV RIY KGR P+ + +
Sbjct: 16 PVSAAQIEHAAALLDAGGLVAFPTETVYGLGGDAENPDAVARIYAAKGRPANHPVIVHLA 75
Query: 81 DVSDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
D N + +HLP L+D+ PGP+T++L R ++ + +++ G +S+G+R P
Sbjct: 76 PHGDPNYW--VEHLPADAQRLIDAFWPGPLTLILKR--AARIPAAVSGGQDSVGLRCPSH 131
Query: 138 NFVRVI------ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRA 191
+ + RG +A SAN G S + + + + V DGG G
Sbjct: 132 PVAQALLEAFSALRGGHGGVAAPSANRFGHVSPTTAQHVRDEFGSAIHVLDGGASDVG-I 190
Query: 192 GSTVVDLTRLGKFKILRPGSAKEETIA 218
ST++DL+R G +LRPG + IA
Sbjct: 191 ESTILDLSR-GFPALLRPGRVTPQDIA 216
>gi|339482376|ref|YP_004694162.1| Sua5/YciO/YrdC/YwlC family protein [Nitrosomonas sp. Is79A3]
gi|338804521|gb|AEJ00763.1| Sua5/YciO/YrdC/YwlC family protein [Nitrosomonas sp. Is79A3]
Length = 347
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 118/231 (51%), Gaps = 19/231 (8%)
Query: 5 LENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIY 64
+E+ Q +N+ L P + A Q L G +A PT+T+YG D + +A+N+IY
Sbjct: 1 MEHTQYK-QNRPNLT-PKQQDQITAAAQVLNAGGTVAFPTETVYGLGADVTNPDAINKIY 58
Query: 65 EIKGRKHTSPLAICVGDVSDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEK 121
+IK R PL + +GD+SD++ +A + +P L + PGP+T++L R S ++
Sbjct: 59 KIKQRPIDHPLIVHIGDISDLHYWA--EEIPDSAWKLANHFWPGPLTLILQR--SRHIPD 114
Query: 122 SLNPGLESIGVRVPDS--NFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCA 178
S+ G +++G+R+P + A G E ALA SAN G+ S +++ E L
Sbjct: 115 SVTGGQDTVGLRIPAHPVALALLAALGPEKALAAPSANRFGRISPTIAAHVREELGSAVD 174
Query: 179 CVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETIAILEKHSLVEEP 229
+ DGG G ST++ ILRPG IA+ S++E+P
Sbjct: 175 MILDGGACEVGLE-STIISFHDQSPM-ILRPGG-----IAVSALESVLEDP 218
>gi|319403916|emb|CBI77504.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 320
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 12/220 (5%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P A +A+ + G+++A+PT+T+YG A DA + +AV I+ K R +PL +
Sbjct: 3 ILPFNNAAINQAVAIFQQGQLVALPTETVYGLAGDATNGKAVASIFSTKARPLFNPLIVH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V D+ + D L L+++ PGP+TVVL N+ GL ++ +R P
Sbjct: 63 VSDIVMAECYVKIDLLSRRLMEAFWPGPLTVVLPLKAHHNIHPLTTAGLNTLAIRSPKGG 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVS-VKDFENLWERCACVYDGGVLPSGRAGSTVVD 197
F VI R LA SAN +G+ S S + F +L + DGG G ST++
Sbjct: 123 FAEVI-RHFGRPLAAPSANQSGKLSPTSALSVFTSLGTSVPLIIDGGASKIG-IESTIIK 180
Query: 198 LTRLGKFKILRPG--------SAKEETIAILEKHSLVEEP 229
+ + +LRPG ++++ LE+ + +E P
Sbjct: 181 ICDENIY-LLRPGGLAIEEIEKVAKKSVKRLEQQTAIEAP 219
>gi|15643615|ref|NP_228661.1| hypothetical protein TM0852 [Thermotoga maritima MSB8]
gi|403252593|ref|ZP_10918902.1| hypothetical protein EMP_02419 [Thermotoga sp. EMP]
gi|418044978|ref|ZP_12683074.1| Sua5/YciO/YrdC/YwlC family protein [Thermotoga maritima MSB8]
gi|4981386|gb|AAD35934.1|AE001752_1 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351678060|gb|EHA61207.1| Sua5/YciO/YrdC/YwlC family protein [Thermotoga maritima MSB8]
gi|402812083|gb|EJX26563.1| hypothetical protein EMP_02419 [Thermotoga sp. EMP]
Length = 335
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 6/192 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ G+VI PT+T+YG DA + EA +I+++K R +PL + + +
Sbjct: 18 KEAAELLRNGEVIIFPTETVYGIGADAYNEEACKKIFKLKERPADNPLIVHIHSFKQLEE 77
Query: 88 FAVTDHLPH-GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A + PH L PGP+TV+ R +S + + L ++ VR+P +
Sbjct: 78 IA-EGYEPHLDFLKKFWPGPLTVIF-RKKSEKIPPVVTADLPTVAVRMPAHPVALKLIEL 135
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN++G+PS+ +VK E+ + + D G P G ST+VDLT+ K
Sbjct: 136 FGHPIAAPSANISGRPSATNVKHVIEDFMGKVKLIIDAGDTPFG-LESTIVDLTK-EKPV 193
Query: 206 ILRPGSAKEETI 217
+LRPG + E +
Sbjct: 194 LLRPGPVEVERL 205
>gi|435845452|ref|YP_007307702.1| translation factor SUA5 [Natronococcus occultus SP4]
gi|433671720|gb|AGB35912.1| translation factor SUA5 [Natronococcus occultus SP4]
Length = 194
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 14/200 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A A++ G+++ PT+T+YG +A ++AV R++E KGR + P+++ V V
Sbjct: 5 EDAAAAIRGGELVVYPTETVYGLGANALDADAVERVFETKGRDRSKPISMAVSSVPSALD 64
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ + + + LPGPVTV+ R E ++ L G + +G+R+PD +
Sbjct: 65 YVRANSREREFMATFLPGPVTVLCRRRE--DVPDELTAGQDRVGIRIPDHAVALRLCERA 122
Query: 148 ESALALTSANLTGQPSSVSVKDFENL----WERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ + TSAN +G S SV+ + L +R A V DGG P STVVD +
Sbjct: 123 GTPITATSANESG---SGSVRRLDELAPTIRDRAAAVIDGGETPG--TESTVVD---VAS 174
Query: 204 FKILRPGSAKEETIAILEKH 223
I R G+ +E LE H
Sbjct: 175 GTIHRRGARADEIERWLESH 194
>gi|56475496|ref|YP_157085.1| translation factor [Aromatoleum aromaticum EbN1]
gi|56311539|emb|CAI06184.1| putative translation factor (SUA5) [Aromatoleum aromaticum EbN1]
Length = 351
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 103/188 (54%), Gaps = 8/188 (4%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA--VT 91
L G+++ +PT+T+YG A DA + AV +I+ KGR PL + + D + R+A +
Sbjct: 22 LHAGELVGMPTETVYGLAADALNVAAVGKIFAAKGRPADHPLIVHLPDAGHLARWAREIP 81
Query: 92 DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESAL 151
D L + PGP+T++L R S + +L G +++G+RVPD + + +S +
Sbjct: 82 DDA-FALARAFWPGPLTLILKRQHS--VPDALTGGQDTVGLRVPDHPVALALLQTFDSGI 138
Query: 152 ALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
A SAN G+ S + + + L ++ A + DGG G ST++DL+R +ILRPG
Sbjct: 139 AAPSANRFGRISPTTAEHVRQELGDKIALILDGGPCVVG-IESTILDLSR-DTPQILRPG 196
Query: 211 SAKEETIA 218
+ E IA
Sbjct: 197 AISAEDIA 204
>gi|402311891|ref|ZP_10830822.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Lachnospiraceae bacterium
ICM7]
gi|400371038|gb|EJP24017.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Lachnospiraceae bacterium
ICM7]
Length = 365
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA +K G ++A PT+T+YG +A EA +IY KGR +PL + + D+
Sbjct: 28 KEAALIIKNGGLVAFPTETVYGLGANALMPEAAKKIYAAKGRPSDNPLIVHISKTEDVKD 87
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
A + +P + L + PGP+TVVL + S + + + GL+++ +R+P+SN R +
Sbjct: 88 IA--NDIPELFYTLSNKFWPGPMTVVLKK--KSIIPDATSGGLDTVAIRLPESNIARALI 143
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS F ++ + + DGG + G ST+VDLT
Sbjct: 144 EVSGVPIAAPSANTSGRPSPTKASHVFADMNSKIEMIIDGGEVGIG-VESTIVDLTE-NT 201
Query: 204 FKILRPGSAKEETI 217
+LRPG+ E +
Sbjct: 202 PTLLRPGAITLEML 215
>gi|167568960|ref|ZP_02361834.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia oklahomensis
C6786]
Length = 341
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 15/205 (7%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
+ A +EA L G+++A PT+T+YG DA S AV RIY KGR P+ + +
Sbjct: 9 SAAQIDEAAALLDAGELVAFPTETVYGLGGDAQSPAAVARIYAAKGRPANHPVIVHLAPG 68
Query: 83 SDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
SD + D LP L+D+ PGP+T++L R ++++ +++ G ES+G+R P
Sbjct: 69 SDPGYW--VDELPADAKKLIDAFWPGPLTLILKR--AAHIPDAVSGGQESVGLRCPSHPV 124
Query: 140 VRVIARGLES------ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGS 193
+ + R ++ +A SAN G S + + + + V DGG G S
Sbjct: 125 AQALLRAFDARRGGHGGVAAPSANRFGHVSPTTAQHVRDEFGDSVHVLDGGASDVG-IES 183
Query: 194 TVVDLTRLGKFKILRPGSAKEETIA 218
T++DL+R G +LRPG + IA
Sbjct: 184 TILDLSR-GFPALLRPGRVTPQQIA 207
>gi|253701566|ref|YP_003022755.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter sp. M21]
gi|251776416|gb|ACT18997.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter sp. M21]
Length = 202
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+ ++ LK G V+A PTDT YG C S + + RIY++K R P + D+S+I+R+
Sbjct: 17 KVVEVLKNGGVVAYPTDTTYGIGCSIFSKKGIERIYQVKQRDRKKPFSFICSDISEISRY 76
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A + L LLPGP T VL +S + + ++G+R+PD+N I + L
Sbjct: 77 ARVSNYAFKQLRRLLPGPYTFVLE--ANSVVPDLVTTKQRTVGIRMPDNNICLAIVKELG 134
Query: 149 SALALTSANLTGQ 161
+ TSANL+G+
Sbjct: 135 HPIVTTSANLSGE 147
>gi|386715900|ref|YP_006182224.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Halobacillus
halophilus DSM 2266]
gi|384075457|emb|CCG46952.1| tRNA threonylcarbamoyladenosine biosynthesis protein [Halobacillus
halophilus DSM 2266]
Length = 346
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 107/196 (54%), Gaps = 14/196 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA L+ +V+A PT+T+YG DA + AV RI+E KGR +PL + V + ++
Sbjct: 22 QEAAYLLREQQVVAFPTETVYGLGADATNESAVQRIFEAKGRPSDNPLIVHVASIREVED 81
Query: 88 FAVTDHLPH---GLLDSLLPGPVTVVL-SRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
H+P L++ PGP+T++L S G +S K++ GL+++ +R+PD +
Sbjct: 82 LVT--HIPQVARNLMERFWPGPLTLILESNGTAS---KNVTAGLKTVAIRMPDHALALAL 136
Query: 144 ARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRA-GSTVVDLTRL 201
+ E LA SAN +G+PS + ++L R A + DGG P+G STV+D T
Sbjct: 137 LKAAELPLAAPSANRSGRPSPTKAEHVRQDLEGRIAGILDGG--PTGVGVESTVLDCTS- 193
Query: 202 GKFKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 194 DIPAILRPGGITKEDL 209
>gi|374340390|ref|YP_005097126.1| Sua5/YciO/YrdC/YwlC family protein [Marinitoga piezophila KA3]
gi|372101924|gb|AEX85828.1| Sua5/YciO/YrdC/YwlC family protein [Marinitoga piezophila KA3]
Length = 341
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 5/191 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + +K GK++ PT+T+YG +A AV I+ KGR +PL D+ DI
Sbjct: 19 KEAAEYIKAGKLVVFPTETVYGLGANALDETAVKNIFIAKGRPSDNPLIAHFSDIKDILD 78
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
F D + L PGP+T VL + N+ + G ++ VR+P R + +
Sbjct: 79 FVEIDKNLFEKIKILTPGPITFVLKK--KKNIPDIVTAGRNTVAVRIPAHPIARALIKES 136
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ +A SANL+G+PS + E+L R + +GG + G STV+DLT +
Sbjct: 137 NTPIAAPSANLSGKPSPTDPQHVIEDLNGRVDIIINGGKVDFG-LESTVIDLTEKIP-TL 194
Query: 207 LRPGSAKEETI 217
LRPG E +
Sbjct: 195 LRPGPITPEKL 205
>gi|418935629|ref|ZP_13489392.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium sp. PDO1-076]
gi|375057664|gb|EHS53825.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium sp. PDO1-076]
Length = 331
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 103/196 (52%), Gaps = 10/196 (5%)
Query: 28 EEAIQA----LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+EAI A L G+ +A+PT+T+YG A DA + A+ IY+ KGR +PL + ++
Sbjct: 12 DEAINAASVILALGRPVAIPTETVYGLAADATNPAAITSIYQTKGRPRFNPLICHMANLE 71
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ A D L L + PGP+T+VL S++ GL+S+G+RVP F +
Sbjct: 72 MAEQHADFDPLSRSLAEHFWPGPLTLVLPLKPESDIHPLATAGLDSVGIRVP-VGFSGDL 130
Query: 144 ARGLESALALTSANLTGQ--PSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
R LA SAN +G+ P++ + D ++L + V DGG G ST++ +
Sbjct: 131 IRHFGRPLAAPSANSSGRISPTTAAHVD-DDLGGKIDLVIDGGACEVG-VESTILKVED- 187
Query: 202 GKFKILRPGSAKEETI 217
GK ++LRPG E I
Sbjct: 188 GKIRLLRPGGVSVEAI 203
>gi|182420265|ref|ZP_02951494.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium butyricum 5521]
gi|237666937|ref|ZP_04526922.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182375860|gb|EDT73452.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium butyricum 5521]
gi|237658136|gb|EEP55691.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 349
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 100/197 (50%), Gaps = 23/197 (11%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E EEA + +K G ++A PT+T+YG DA + +AV +I+ KGR +PL I V
Sbjct: 15 EYKIEEAAKIIKEGGIVAFPTETVYGLGADALNEDAVKKIFVAKGRPQDNPLIIHVAS-K 73
Query: 84 DINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
+I + D +P L+D PGP+T++L + + + + L+SIGVR+PD+
Sbjct: 74 NIEHY--VDEIPEIAKELMDKFWPGPLTIILKKNDI--IPNITSASLDSIGVRMPDNEIA 129
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYD-------GGVLPSGRAGS 193
R + + +A SAN++G+PS + ERC D GG S
Sbjct: 130 RKLIELSGTTIAAPSANISGRPSPTDI-------ERCVEDLDGRVDYIIGGCHSKIGVES 182
Query: 194 TVVDLTRLGKFKILRPG 210
T+VD T + +LRPG
Sbjct: 183 TIVDCT-VDPPLVLRPG 198
>gi|423714121|ref|ZP_17688380.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395421268|gb|EJF87524.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella vinsonii subsp.
arupensis OK-94-513]
Length = 320
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P + +EA+ L+ G+++A+PT+T+YG A DA + AV+ I+ K R +PL
Sbjct: 3 ILPLNSSSIKEAVALLEQGRLVALPTETVYGLAGDATNGRAVSSIFSTKNRPQFNPLIAH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + R+ D + L+++ PGPVT VL ++ GL ++ VR PDS
Sbjct: 63 VSGIKMAERYVDIDVVSRRLMEAFWPGPVTFVLPLKAHHDIHPLTTSGLNTLAVRFPDSR 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F V+ + LA SAN +G+ S S + E+L + DGG G ST++
Sbjct: 123 FAEVV-QCFGRPLAAPSANQSGRLSPTSAEAVLESLGRSVPLILDGGPSKIGLE-STIIK 180
Query: 198 LTRLGKFKILRPGSAKEETIAILEKHSL 225
+ + +LRPG E I + SL
Sbjct: 181 ICGESIY-LLRPGGLSVEEIEKIAGKSL 207
>gi|389816676|ref|ZP_10207628.1| hypothetical protein A1A1_06197 [Planococcus antarcticus DSM 14505]
gi|388465049|gb|EIM07371.1| hypothetical protein A1A1_06197 [Planococcus antarcticus DSM 14505]
Length = 330
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 15/201 (7%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E + +A++ L+ G+V+A PT+T+YG DA + EAV++I+E KGR +PL + V
Sbjct: 15 EKYYAQAVEILRAGEVVAFPTETVYGLGADATNPEAVSKIFEAKGRPADNPLIVHV---- 70
Query: 84 DINRFAVTDHLPH------GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
D + A+T H+ +D+ PG +T+++ + ++ LE++G+RVP+
Sbjct: 71 DSKKAALT-HVQEVSAKALQCMDAFWPGALTLIMQE-KPGTFAGNVTANLETVGIRVPNH 128
Query: 138 NFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVV 196
+ R L+ LA SAN +G+PS +++ + ++ R + DGG G STV+
Sbjct: 129 PVALNLLRKLQLPLAAPSANTSGKPSPTLAEHVYHDMDGRIPLILDGGATEIG-IESTVL 187
Query: 197 DLTRLGKFKILRPGSAKEETI 217
D T ILRPG +E I
Sbjct: 188 DTTCEPPV-ILRPGKISKEQI 207
>gi|163761038|ref|ZP_02168116.1| hypothetical protein HPDFL43_03344 [Hoeflea phototrophica DFL-43]
gi|162281819|gb|EDQ32112.1| hypothetical protein HPDFL43_03344 [Hoeflea phototrophica DFL-43]
Length = 323
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 94/190 (49%), Gaps = 6/190 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A++AL+ G+ +AVPT+T+YG A DA + A+ IYE KGR +PL V D+
Sbjct: 16 AVEALRRGEAVAVPTETVYGLAADATNPSAITAIYEAKGRPRFNPLISHVSDMDMARAHV 75
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ L L + PGP+T+VL + + GLE+ VR+P+ F R + +
Sbjct: 76 LFTPLAEKLAAAFWPGPLTLVLPLNPDGGIHELATAGLETAAVRIPE-GFARTLIKSFGG 134
Query: 150 ALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLG-KFKIL 207
LA SAN +G+ S S + ++L R V DGG R G L G K +L
Sbjct: 135 PLAAPSANRSGRISPTSARHVADDLDGRINLVLDGGPC---RVGVESTILAVNGDKLTLL 191
Query: 208 RPGSAKEETI 217
RPG + I
Sbjct: 192 RPGGIPVDAI 201
>gi|49473987|ref|YP_032029.1| hypothetical protein BQ03430 [Bartonella quintana str. Toulouse]
gi|49239490|emb|CAF25843.1| hypothetical protein BQ03430 [Bartonella quintana str. Toulouse]
Length = 320
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 99/208 (47%), Gaps = 4/208 (1%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P A ++A+ L+ GK++A+PT+T+YG A DA + AV I+ K R +PL
Sbjct: 3 ILPLNNASIKKAVALLEQGKLVALPTETVYGLAGDATNGRAVASIFFTKRRPKFNPLIAH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + + D L L++ PGP+T+VL N+ GL ++ +R PDS
Sbjct: 63 VSGIVMAEHYVEIDFLSRRLMEVFWPGPLTLVLPLKAHHNIHPLTTSGLNTLAIRFPDSR 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F V+ R LA SAN +G S S F L E + DGG G ST+V
Sbjct: 123 FAEVVER-FGRPLAAPSANQSGCISPTSAGAVFAFLGESVPLILDGGACKIGLE-STIVK 180
Query: 198 LTRLGKFKILRPGSAKEETIAILEKHSL 225
+ + +LRPG E I + SL
Sbjct: 181 VCGESIY-LLRPGGLAAEEIEAVAGKSL 207
>gi|116250734|ref|YP_766572.1| Sua5 family protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115255382|emb|CAK06457.1| putative Sua5 family protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 324
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 36 TGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLP 95
G IA+PT+T+YG A DA + A+ RIYE KGR +PL + D++ A D L
Sbjct: 24 NGFAIAIPTETVYGLAADATNPLAIARIYETKGRPRFNPLICHMADLAMAEEHAEFDPLS 83
Query: 96 HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTS 155
L + PGP+T+VL S + GL+S+G+RVP F + LA S
Sbjct: 84 RALAKAFWPGPLTLVLPLKRESPIHSLATAGLDSVGIRVP-KGFAGALIGAFGRPLAAPS 142
Query: 156 ANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
AN +G S+ S E +L + + D G PS + + G+ ++LRPG
Sbjct: 143 ANTSGGVSATSAAHVEADLGAKIPLILDAG--PSAVGVESTIVKAEGGRLRLLRPG 196
>gi|372324055|ref|ZP_09518644.1| YrdC/Sua5 family protein required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Oenococcus kitaharae DSM
17330]
gi|366982863|gb|EHN58262.1| YrdC/Sua5 family protein required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Oenococcus kitaharae DSM
17330]
Length = 338
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 3/192 (1%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A L G V+A PT+T+YG DA SE V++++ K R H +PL + V D + R
Sbjct: 13 QRAADILAKGGVVAFPTETVYGIGADATKSEPVDKVFAAKKRPHDNPLIVTVSDDQMLRR 72
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
FA D L+ PG +T++L + L ++ GL + R P S R +
Sbjct: 73 FAKLDQRAEKLIAHFWPGSLTLILPLLDDEILPSNVTAGLSTAAFRNPKSQVTRNLISLF 132
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ + SANL+ +PS+ + ++ R V D G G ST+VDL+ + I
Sbjct: 133 NNPIVGPSANLSTKPSTTTAAHVMHDMAGRIDAVIDDGPSQIG-VESTIVDLS-VPDATI 190
Query: 207 LRPGSAKEETIA 218
LRPG+ + IA
Sbjct: 191 LRPGAVTADEIA 202
>gi|167629001|ref|YP_001679500.1| sua5/ycio/yrdc/ywlc family protein [Heliobacterium modesticaldum
Ice1]
gi|167591741|gb|ABZ83489.1| sua5/ycio/yrdc/ywlc family protein [Heliobacterium modesticaldum
Ice1]
Length = 422
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 97/196 (49%), Gaps = 8/196 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EA L+ G ++A PT+T+YG DA +EAV I+ KGR +PL + + D D+ R
Sbjct: 24 REAAACLQAGGLVAFPTETVYGLGADALQAEAVAAIFTAKGRPSDNPLIVHIADRDDVAR 83
Query: 88 FAVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
V L L + PGP+T+VL S + + GL ++ VR+P R +
Sbjct: 84 LTVGFPALARRLAERFWPGPLTLVLP--ASPQIPAVVTAGLATVAVRMPSHPVARALIGE 141
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+ +A SAN +G+PS + +E+L R + DGG G STVVD T G
Sbjct: 142 AGTPVAAPSANRSGRPSPTTAAHVWEDLGGRIDGIVDGGDCDLGLE-STVVDAT--GDVA 198
Query: 206 -ILRPGSAKEETIAIL 220
ILRPG E I L
Sbjct: 199 VILRPGGVTREMIEAL 214
>gi|395792073|ref|ZP_10471512.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|395432992|gb|EJF98966.1| Sua5/YciO/YrdC/YwlC family protein [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 320
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P + +EA+ L+ G+++A+PT+T+YG A DA + AV+ I+ K R +PL
Sbjct: 3 ILPLNSSSIKEAVALLEQGRLVALPTETVYGLAGDATNGRAVSSIFSTKNRPQFNPLIAH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + R+ D + L+++ PGPVT VL ++ GL ++ VR PDS
Sbjct: 63 VSGIKMAERYVDIDVVSRRLMEAFWPGPVTFVLPLKAHHDIHPLTTSGLNTLAVRFPDSR 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F V+ + LA SAN +G+ S S + E+L + DGG G ST++
Sbjct: 123 FAEVV-QCFGRPLAAPSANQSGRLSPTSAEAVLESLGRSVPLILDGGPSKIGLE-STIIK 180
Query: 198 LTRLGKFKILRPGSAKEETIAILEKHSL 225
+ + +LRPG E I + SL
Sbjct: 181 ICGESIY-LLRPGGLSVEEIEKIAGKSL 207
>gi|407796958|ref|ZP_11143908.1| Sua5/YciO/YrdC/YwlC family protein [Salimicrobium sp. MJ3]
gi|407018703|gb|EKE31425.1| Sua5/YciO/YrdC/YwlC family protein [Salimicrobium sp. MJ3]
Length = 335
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 12/193 (6%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A++AL+ + +A PT+T+YG DA S EAV++I++ KGR +PL + +G+ S ++ A
Sbjct: 15 AVEALRQKETVAFPTETVYGLGADATSKEAVSKIFKAKGRPADNPLIVHIGERSQLSAIA 74
Query: 90 VT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLN--PGLESIGVRVPDSNFVRVIARG 146
+ +D+ PGP+TV++ SN E + N L++IGVR+PD +
Sbjct: 75 SSWSETAEKCMDAFWPGPLTVIV----PSNHEAAPNVTSNLDTIGVRMPDHPVALELLSK 130
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGKF 204
+A SAN +G+PS + +E+L + + DGG P+G STVVD T
Sbjct: 131 AGVPIAAPSANSSGKPSPTTAGHVYEDLNGKITGIVDGG--PTGVGVESTVVDCTSEVPV 188
Query: 205 KILRPGSAKEETI 217
ILRPG +E +
Sbjct: 189 -ILRPGGITKEDL 200
>gi|386720598|ref|YP_006186923.1| hypothetical protein B2K_00165 [Paenibacillus mucilaginosus K02]
gi|384087722|gb|AFH59158.1| hypothetical protein B2K_00165 [Paenibacillus mucilaginosus K02]
Length = 359
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 105/219 (47%), Gaps = 12/219 (5%)
Query: 1 MAFSLENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAV 60
M+ + + +V+ E A P T A E LK G +A PT+T+YG DA S+EAV
Sbjct: 2 MSMTTKQWKVTAEEAA----PETLA---EPASLLKKGGTVAFPTETVYGLGADARSTEAV 54
Query: 61 NRIYEIKGRKHTSPLAICVGDVSDINRF-AVTDHLPHGLLDSLLPGPVTVVLSRGESSNL 119
++ KGR +PL + + D S + A + LLD+ PGP+TVVL L
Sbjct: 55 AAVFAAKGRPSDNPLIVHIADRSQLEELTAPPEEAVSRLLDAFWPGPLTVVLP-ARPGVL 113
Query: 120 EKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCA 178
+ GL ++GVR+PD + +A SAN +G+PS E+L R
Sbjct: 114 SPLVTAGLFTVGVRMPDHPVALALIAAAGCPVAAPSANRSGRPSPTRASHVLEDLGGRIG 173
Query: 179 CVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETI 217
V DGG G STVV+ + G ILRPG + +
Sbjct: 174 GVVDGGEAGVGLE-STVVEYSG-GALHILRPGGVTQAQL 210
>gi|116873906|ref|YP_850687.1| Sua5/YciO/YrdC/YwlC family protein [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116742784|emb|CAK21908.1| Sua5/YciO/YrdC/YwlC family protein [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 345
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 107/194 (55%), Gaps = 9/194 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ G+ +A PT+T+YG DA + A+ +IY KGR +PL + + +++
Sbjct: 19 QEAAKLLQKGECVAFPTETVYGLGADATNQAAIQKIYTAKGRPSDNPLIVHIARREQMDQ 78
Query: 88 FAVTDHLPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
F V + P L++ PGP+T++L + S L +++ GL ++GVR+P+ + +
Sbjct: 79 F-VESYPPKAIQLMEKFWPGPLTLILPLIKDS-LAANVSAGLSTVGVRMPEHPVSLDLIK 136
Query: 146 GLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGK 203
+A SAN +G+PS + E+L + A + DGG P+G STV+D ++
Sbjct: 137 TANIPVAAPSANRSGKPSPTTAAHVIEDLDGKIAGIIDGG--PTGVGLESTVIDCSQETP 194
Query: 204 FKILRPGSAKEETI 217
ILRPG +E I
Sbjct: 195 V-ILRPGGITKEQI 207
>gi|239828601|ref|YP_002951225.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus sp. WCH70]
gi|239808894|gb|ACS25959.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus sp. WCH70]
Length = 348
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 7/195 (3%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
+EA Q LK+G+V+A PT+T+YG +A ++AV +I+ KGR +PL + + + +
Sbjct: 20 QVKEAAQLLKSGEVVAFPTETVYGLGANAKDAKAVEKIFAAKGRPSDNPLIVHIAHLKQL 79
Query: 86 NRF--AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
A+ D + H L+ PGP+T+VL + E + + GL ++ VR+P +
Sbjct: 80 EEMVSAIPD-VAHTLIKRFWPGPLTLVLPKKEGV-ISDPVTAGLPTVAVRMPAHPVALAL 137
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
LA SAN++G+PS + F +L R A + DGG G STV+D T
Sbjct: 138 IEASGLPLAAPSANISGRPSPTTAAHVFADLNGRIAGIVDGGETGIG-VESTVLDCTTKV 196
Query: 203 KFKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 P-TILRPGGVTKEAL 210
>gi|150401886|ref|YP_001325652.1| Sua5/YciO/YrdC/YwlC family protein [Methanococcus aeolicus
Nankai-3]
gi|150014589|gb|ABR57040.1| Sua5/YciO/YrdC/YwlC family protein [Methanococcus aeolicus
Nankai-3]
Length = 341
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 6/201 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A A+K G ++A PT+T+YG DA + +AV +I+++KGR +PL I V ++ N+
Sbjct: 12 EIAANAIKDGDLVAFPTETVYGLGADALNPDAVEKIFKVKGRPIDNPLIIHVNNLEMANK 71
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A LL PGP+T++L + E N L+++ VR+P++ +
Sbjct: 72 IAHITENAKILLQKFSPGPLTIILKKKEVVPAITCAN--LDTVAVRIPNNKIALELIEKA 129
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ +A SANL+G+PS +++ ++L ++ +G + STV+DLT K KI
Sbjct: 130 NTPIAAPSANLSGKPSPTNIQHIIDDLGDKINYAIEGET--TIGVESTVLDLTE-KKPKI 186
Query: 207 LRPGSAKEETIAILEKHSLVE 227
LR GS E + + L+E
Sbjct: 187 LRYGSITYEDLKKVIDIELIE 207
>gi|89897678|ref|YP_521165.1| hypothetical protein DSY4932 [Desulfitobacterium hafniense Y51]
gi|89337126|dbj|BAE86721.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 348
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 114/213 (53%), Gaps = 9/213 (4%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
P TE +EA Q ++ G+++A+PT+T+YG +A + A I+++KGR +PL + +
Sbjct: 13 PQTE-WIKEAAQLIREGQLVALPTETVYGLGANAMDAHACQEIFKVKGRPQDNPLIVHIS 71
Query: 81 DVSDINRFAVTDHLPHGLL--DSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
D++ + R V + P L D PGP+T+VL + ++ + ++ GL ++ +R+P
Sbjct: 72 DLAMVKRL-VEEWTPQAALCADKFWPGPLTLVLEK--TAFVPDVVSGGLGTVAIRMPKHP 128
Query: 139 FVRVIARGLESALALTSANLTGQPSSVS-VKDFENLWERCACVYDGGVLPSGRAGSTVVD 197
+ + +A SANL+G+PS + +++L + + DGG G STV+D
Sbjct: 129 VALELIKEAGVPIAAPSANLSGKPSPTQGIHVWKDLKGKIPLILDGGPCAVG-VESTVLD 187
Query: 198 LTRLGKFKILRPGSAKEETIAILEKHSLVEEPA 230
LT ILRPG +E + + V+ PA
Sbjct: 188 LTDEVP-TILRPGGITKEQLEEVLGEVAVDRPA 219
>gi|408794236|ref|ZP_11205841.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408461471|gb|EKJ85201.1| tRNA threonylcarbamoyl adenosine modification protein,
Sua5/YciO/YrdC/YwlC family [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 347
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 99/191 (51%), Gaps = 13/191 (6%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
++ GKV+ PT+T+YG S EA R+YEIKGR +PL + +I + V
Sbjct: 16 IQEGKVVIFPTETVYGIGASTRSEEACLRVYEIKGRPKDNPLIAHFPSIEEIEKVCVLGD 75
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L LL+ PGP+T++L + + S K L+ ++ VR+P + VR R ++
Sbjct: 76 LGRKLLEKFSPGPLTLILKKKDKSLFPKELD----TLAVRIPKNPLVREWIRLTGGPVSA 131
Query: 154 TSANLTGQPSSVSVKDFENLWERCACVYDGGVL---PSGRAGSTVVDLTRLGKFK-ILRP 209
SANL+G+PS + D +E DG ++ PS STVV L +G+ +LRP
Sbjct: 132 PSANLSGRPSLTKLTDVVRYFEGKV---DGILIAEEPSYGIESTVVSL--VGEHPALLRP 186
Query: 210 GSAKEETIAIL 220
GS + E + I
Sbjct: 187 GSIESEELKIF 197
>gi|261221622|ref|ZP_05935903.1| Sua5/YciO/YrdC/YwlC family protein [Brucella ceti B1/94]
gi|265997584|ref|ZP_06110141.1| Sua5/YciO/YrdC/YwlC family protein [Brucella ceti M490/95/1]
gi|260920206|gb|EEX86859.1| Sua5/YciO/YrdC/YwlC family protein [Brucella ceti B1/94]
gi|262552052|gb|EEZ08042.1| Sua5/YciO/YrdC/YwlC family protein [Brucella ceti M490/95/1]
Length = 323
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL V ++ R+
Sbjct: 14 RAVEVLRRGGLVAIPTETVYGLAADAANGEGVAGIFAAKGRPQFNPLIAHVDGIAMAGRY 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVIA 144
D + L ++ PGP+T+VL E + E+ ++P GL ++ VR+P VR +
Sbjct: 74 VAFDPVSRRLAEAFWPGPLTIVLPLKERQDTERPIHPLVTAGLSTLAVRMPHGR-VRDVI 132
Query: 145 RGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
L+S +A SAN +G+ S S +L R + D G P G + + +
Sbjct: 133 TALDSPVAAPSANTSGRISPTSAAAVAGDLGGRIDLILDAG--PCGVGVESTIVKVDGDQ 190
Query: 204 FKILRPGS-AKEETIAIL 220
+LRPG A EE A L
Sbjct: 191 VHLLRPGGLAAEEIEAFL 208
>gi|197117703|ref|YP_002138130.1| tRNA (N6-threonylcarbamoyl-A37) modification ATPase [Geobacter
bemidjiensis Bem]
gi|197087063|gb|ACH38334.1| tRNA (N6-threonylcarbamyl-A37) modification ATPase [Geobacter
bemidjiensis Bem]
Length = 202
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+ ++ LK G V+A PTDT YG C S + + RIY++K R P + D+S+I+R+
Sbjct: 17 KVVEILKNGGVVAYPTDTTYGIGCSIFSKKGIERIYQVKQRDRKKPFSFICSDISEISRY 76
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A + L LLPGP T VL +S + + ++G+R+PD+N I + L
Sbjct: 77 ARVSNYAFKQLRRLLPGPYTFVLE--ANSVVPDLVTTKQRTVGIRMPDNNICLAIVKELG 134
Query: 149 SALALTSANLTGQ 161
+ TSANL+G+
Sbjct: 135 HPIVTTSANLSGE 147
>gi|331270448|ref|YP_004396940.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium botulinum
BKT015925]
gi|329126998|gb|AEB76943.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium botulinum
BKT015925]
Length = 349
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 11/204 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EEA + L+ G ++A PT+T+YG +A SEAV +I+ KGR +PL + ++D N
Sbjct: 19 EEAGEVLREGGLVAFPTETVYGLGANALDSEAVKKIFIAKGRPQDNPLIV---HIADFNL 75
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ + +P +++ PGP+T+++ + S + + GLES+G+R+P + R +
Sbjct: 76 DGLVEEVPSIAKKIMEKFWPGPLTLIMKK--SREIPYVTSAGLESVGIRMPSNIVARELI 133
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ +A SAN++G+PS +++ E+L ER + G G ST+VD T +
Sbjct: 134 KKSGVPIAAPSANISGKPSPTNIERCIEDLNERVEYIIGGEKCEVGLE-STIVDCT-INP 191
Query: 204 FKILRPGSAKEETIAILEKHSLVE 227
+LRPG E + +E ++
Sbjct: 192 PCVLRPGGITLEMLREIEPEIYID 215
>gi|392555109|ref|ZP_10302246.1| putative translation factor [Pseudoalteromonas undina NCIMB 2128]
Length = 332
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 18/196 (9%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
TE +A+ LK G+ +A+PT+T+YG A DA + +AV +I+ KGR PL + + +
Sbjct: 12 TEERINQAVALLKAGECVALPTETVYGLAADATNRDAVAKIFIAKGRPTNHPLIVHIPNQ 71
Query: 83 S-------DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVP 135
S ++N+ A+T L D+ PGP+T++L+ + +L + GL +IG+RVP
Sbjct: 72 SHVHHWAKNVNKAAIT------LADAFWPGPLTLILNAKD--DLNSPVTGGLPTIGLRVP 123
Query: 136 DSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGST 194
+ + L + LA SAN Q S +S +L R + V GG G ST
Sbjct: 124 AHPEFLAVLKQLNTGLAAPSANRYKQLSPISAAHVMRDLNGRISAVLQGGECNVG-IEST 182
Query: 195 VVDLTRLGKFKILRPG 210
+VD + + +ILRPG
Sbjct: 183 IVDASS-QQLRILRPG 197
>gi|291520269|emb|CBK75490.1| Sua5/YciO/YrdC/YwlC family protein [Butyrivibrio fibrisolvens 16/4]
Length = 353
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 10/186 (5%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA + LK G ++A PT+T+YG DA EA +IY+ KGR +PL + + + +
Sbjct: 20 EASEILKNGGLVAFPTETVYGLGGDATDKEASRKIYQAKGRPSDNPLIVHIAKFEQLEQ- 78
Query: 89 AVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
+T LP L D+ PGP+T+V ++ E E + GL+++ VR+P++ +
Sbjct: 79 -ITTDLPETAKKLADAFWPGPLTMVCNKNEVIPYETT--GGLDTVAVRMPNNPVALALIE 135
Query: 146 GLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+A SAN +G+PS +E+L + + DGG + G ST+VDLT
Sbjct: 136 ESGCMIAAPSANTSGRPSPTKASHVYEDLSGKIEAILDGGPVDIGLE-STIVDLTE-DIV 193
Query: 205 KILRPG 210
ILRPG
Sbjct: 194 TILRPG 199
>gi|225028193|ref|ZP_03717385.1| hypothetical protein EUBHAL_02465 [Eubacterium hallii DSM 3353]
gi|224954505|gb|EEG35714.1| Sua5/YciO/YrdC/YwlC family protein [Eubacterium hallii DSM 3353]
Length = 353
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 18/206 (8%)
Query: 9 QVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKG 68
+VS E KA ++ A E ++ G ++A PT+T+YG DA ++EA +IY KG
Sbjct: 10 KVSPEEKAAALKKAGEI--------IREGGLVAFPTETVYGLGADALNAEASAKIYAAKG 61
Query: 69 RKHTSPLAICVGDVSDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNP 125
R +PL + + DV + + + +P +++ PGP+TV+L++ S +
Sbjct: 62 RPSDNPLIVHIHDVDQV--YEIASEVPEAAKKVMEKFWPGPLTVILNK--KSCVPDGTTG 117
Query: 126 GLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGG 184
GL+++ +R+P R R +A SAN +G+PS +++ +E++ R + DGG
Sbjct: 118 GLKTVAIRMPSHPLARDFIRESGRMIAAPSANTSGRPSPTLASHVYEDMQGRIPLILDGG 177
Query: 185 VLPSGRAGSTVVDLTRLGKFKILRPG 210
+ G ST++D++ ILRPG
Sbjct: 178 AVGIG-IESTIIDMS-TDTPTILRPG 201
>gi|95929617|ref|ZP_01312359.1| Sua5/YciO/YrdC/YwlC [Desulfuromonas acetoxidans DSM 684]
gi|95134314|gb|EAT15971.1| Sua5/YciO/YrdC/YwlC [Desulfuromonas acetoxidans DSM 684]
Length = 204
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 6/198 (3%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+ + ++ ++ L+ VIA PTDT+YG CD + + + +IY++K R P + D+S
Sbjct: 12 QRYIDQVVECLRRDGVIAYPTDTIYGVGCDIFNKKGIKKIYQLKRRDVKKPFSFICSDLS 71
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+I+R+A ++ ++ LPGP T VL S + + ++G+R+PD+ I
Sbjct: 72 EISRYAHVSNMAFKIMKRHLPGPYTFVLD--ASRVVPDLVMTKQRTVGIRMPDNAITLEI 129
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFENLW-ERCACVYDGGVLPSGRAGSTVVDLTRLG 202
R L L TSAN++G + + W + V DGG L STV+ L R
Sbjct: 130 VRQLGHPLVTTSANISGDETYQDPSLIHDDWGKHLDMVVDGGRLYGD--PSTVISL-RND 186
Query: 203 KFKILRPGSAKEETIAIL 220
+ ++LR G + I L
Sbjct: 187 QIEVLRQGCGPTDWIHQL 204
>gi|229020544|ref|ZP_04177289.1| hypothetical protein bcere0030_50250 [Bacillus cereus AH1273]
gi|229026765|ref|ZP_04183097.1| hypothetical protein bcere0029_50320 [Bacillus cereus AH1272]
gi|423388378|ref|ZP_17365604.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG1X1-3]
gi|423416764|ref|ZP_17393853.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG3X2-1]
gi|228734488|gb|EEL85150.1| hypothetical protein bcere0029_50320 [Bacillus cereus AH1272]
gi|228740764|gb|EEL91017.1| hypothetical protein bcere0030_50250 [Bacillus cereus AH1273]
gi|401109326|gb|EJQ17251.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG3X2-1]
gi|401643566|gb|EJS61263.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cereus BAG1X1-3]
Length = 346
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A EA+ +I+ KGR +PL + +G S ++
Sbjct: 22 KEAARLLRENEAVAFPTETVYGLGANAMDDEAIAKIFAAKGRPSDNPLIVHIGTKSQLD- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L++ PGP+T++L R E + + + GL ++GVR+PD +
Sbjct: 81 -GIVREIPPVAEKLMEHFWPGPLTIILPRKEG--ISERVTAGLNTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSEVP 196
Query: 204 FKILRPGS-AKEETIAILEKHSL 225
ILRPG KE+ A++ SL
Sbjct: 197 -TILRPGGITKEQLEAVIGNVSL 218
>gi|332158705|ref|YP_004423984.1| sua5 superfamily-like protein [Pyrococcus sp. NA2]
gi|331034168|gb|AEC51980.1| sua5 superfamily-related protein [Pyrococcus sp. NA2]
Length = 340
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + ++ GK++A PT+T+YG DA + AV RI+E KGR +PL + + S ++ A
Sbjct: 19 AARLIREGKLVAFPTETVYGLGADALNESAVRRIFEAKGRPADNPLIVHISSFSQVHELA 78
Query: 90 VTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+P L PGP+ +VL + E + K GL+++ +R+P + +
Sbjct: 79 --REVPEEAKMLAREFWPGPLAIVLPKSEI--VPKVTTGGLDTVAIRMPANKIALKLIEL 134
Query: 147 LESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN++G+PS S + E+ + + C+ DGG G STV+DLT
Sbjct: 135 SGRPIAAPSANISGKPSPTSAEHVAEDFYGKIECIVDGGETKIG-VESTVIDLTEWPPV- 192
Query: 206 ILRPGSAKEETI 217
+LRPG E I
Sbjct: 193 LLRPGGLPLEEI 204
>gi|237653845|ref|YP_002890159.1| Sua5/YciO/YrdC/YwlC family protein [Thauera sp. MZ1T]
gi|237625092|gb|ACR01782.1| Sua5/YciO/YrdC/YwlC family protein [Thauera sp. MZ1T]
Length = 370
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 98/186 (52%), Gaps = 10/186 (5%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT---DH 93
G+++ +PT+T+YG A DA EAV +I+ KGR PL + + V + ++A D
Sbjct: 30 GELVGMPTETVYGLAADALDPEAVKKIFAAKGRPADHPLIVHLPSVEHLPQWAAAIPKDA 89
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L L + PGP+T++L R + ++ + G +++GVRVP + R + LA
Sbjct: 90 L--ALARAFWPGPLTLILKR--TPDVPDEVTGGQDTVGVRVPAHPVALALLRAFDGGLAA 145
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSA 212
SAN G+ S + E L ER A + DGG G ST++D +R +ILRPG+
Sbjct: 146 PSANRFGRISPTTAAHVHEELGERVAMILDGGACAVG-IESTILDFSR-DVPEILRPGAI 203
Query: 213 KEETIA 218
E IA
Sbjct: 204 TPEDIA 209
>gi|418575561|ref|ZP_13139711.1| putative translation factor [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325963|gb|EHY93091.1| putative translation factor [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 347
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 102/190 (53%), Gaps = 13/190 (6%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
+ G +IA+PT+T+YG DA + A+ IY KGR +PL + + V I F TD
Sbjct: 28 FENGGLIAIPTETVYGLGADARNEAAIKHIYSAKGRPSDNPLIVHIYKVEQIQAF--TDK 85
Query: 94 LP---HGLLDSLLPGPVTVV--LSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
L L++ PGP++ + L +G L +S++ GL+SI VR+P R I + ++
Sbjct: 86 LSKEVEMLMNEFWPGPISFIVPLKKGY---LCESVSGGLDSIAVRMPSHPIGRQILKYVD 142
Query: 149 SALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A SANL+G+PS + + + +L R + +G G STV+D T+ FKI
Sbjct: 143 MPIAAPSANLSGRPSPTTFEHVYRDLDGRIDGIVNGDQSEEGLE-STVLDCTQF-PFKIA 200
Query: 208 RPGSAKEETI 217
RPGS + I
Sbjct: 201 RPGSITKSMI 210
>gi|150403108|ref|YP_001330402.1| Sua5/YciO/YrdC/YwlC family protein [Methanococcus maripaludis C7]
gi|150034138|gb|ABR66251.1| Sua5/YciO/YrdC/YwlC family protein [Methanococcus maripaludis C7]
Length = 206
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 16/196 (8%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
E A + + GK+I TDTLYG + +A +A+ +IY IK R P++I +G+ I
Sbjct: 17 EIESARKMILDGKIILCGTDTLYGLSTNALDKKAIEKIYSIKERDPNKPISISLGEKDQI 76
Query: 86 NRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP---GLESIGVRVPDSNFVRV 142
+ D +++ +PGP+TV+L + K + P G +GVR+PD++ +R
Sbjct: 77 ENYVYVDKPAKKIIEKFMPGPITVILKK-------KDIIPDILGKNDVGVRIPDNDVIRK 129
Query: 143 IARGLESALALTSANLTGQPSSVSVKDFENLW-ERCACVYDGGVLPSGRAGSTVVDLTRL 201
IA L TSAN++G+ + S+++ +++ E+ + D G + ST+V +
Sbjct: 130 IAI---VPLTTTSANISGKTAPASLEEVDSIIKEKVDLIIDTGPC-KYKVQSTIVKVID- 184
Query: 202 GKFKILRPGSAKEETI 217
GK +++R G E I
Sbjct: 185 GKIELIREGKIPFEDI 200
>gi|229000111|ref|ZP_04159681.1| hypothetical protein bmyco0003_46640 [Bacillus mycoides Rock3-17]
gi|228759648|gb|EEM08624.1| hypothetical protein bmyco0003_46640 [Bacillus mycoides Rock3-17]
Length = 343
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S +
Sbjct: 18 QKAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGSKSQLK- 76
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L + E + + + GL+++GVR+PD +
Sbjct: 77 -GIVREIPEVAEVLMKHFWPGPLTIILPKKE--GISEKVTAGLDTVGVRMPDHPVALALI 133
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 134 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSEVP 192
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 193 -TILRPGGITKEQL 205
>gi|227535364|ref|ZP_03965413.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227186960|gb|EEI67027.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 333
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 4/201 (1%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ EA ALK G+++A PT+T+YG DA + AV ++Y KGR +PL + V D
Sbjct: 7 ESDIPEAAAALKRGELVAFPTETVYGLGADATNVTAVGKVYAAKGRPSDNPLIVTVADAD 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ ++A L L+++ PGP+T++L+ L + GL++ R PD+ R +
Sbjct: 67 MVGQYATITPLAAKLMEAFWPGPLTIILNI-LPGRLSMKVTGGLQTAAFRNPDNALTRKL 125
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ SAN +G+PS + +L + A V D G G S ++DLT +
Sbjct: 126 IATAGVPIVGPSANTSGKPSPTTADHVLHDLDGKIAGVLDDGPTQVG-VESAIIDLT-VT 183
Query: 203 KFKILRPGSAKEETIAILEKH 223
ILRPG+ + + L H
Sbjct: 184 PPAILRPGAIGPDELEPLIGH 204
>gi|373450227|ref|ZP_09542251.1| putative rRNA maturation factor [Wolbachia pipientis wAlbB]
gi|371932562|emb|CCE77248.1| putative rRNA maturation factor [Wolbachia pipientis wAlbB]
Length = 195
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 99/190 (52%), Gaps = 5/190 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
E I A+K + PT+T+Y +C+A +E++ +IY IK R PL++ V ++ +
Sbjct: 4 EVINAIKNNLLACFPTETVYALSCNALGNESIEKIYRIKKRSQNKPLSVFVSNIDSLINI 63
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A L++ PGP+T +L ++S L +SIG+R+PD I L+
Sbjct: 64 AKVKEEYIDLINYFSPGPMTYILPLQDNSILPNEF--FKDSIGIRIPDHPIAISILNELK 121
Query: 149 SALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ + TS N++G+ S +D +++ + + V + L SG ST++DLT K K+L
Sbjct: 122 TPVVATSINISGEKSICKARDIPQSIKQHLSAVIEDDELVSG-IESTIIDLTG-DKIKVL 179
Query: 208 RPGSAKEETI 217
R G +TI
Sbjct: 180 RKGKISLQTI 189
>gi|229007631|ref|ZP_04165225.1| hypothetical protein bmyco0002_45100 [Bacillus mycoides Rock1-4]
gi|228753642|gb|EEM03086.1| hypothetical protein bmyco0002_45100 [Bacillus mycoides Rock1-4]
Length = 340
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S +
Sbjct: 15 QKAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGSKSQLK- 73
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L + E + + + GL+++GVR+PD +
Sbjct: 74 -GIVREIPEVAEVLMKHFWPGPLTIILPKKE--GISEKVTAGLDTVGVRMPDHPVALALI 130
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 131 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSEVP 189
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 190 -TILRPGGITKEQL 202
>gi|255658857|ref|ZP_05404266.1| Sua5/YciO/YrdC/YwlC family protein [Mitsuokella multacida DSM
20544]
gi|260849260|gb|EEX69267.1| Sua5/YciO/YrdC/YwlC family protein [Mitsuokella multacida DSM
20544]
Length = 352
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 104/200 (52%), Gaps = 11/200 (5%)
Query: 24 EAHAEEAIQA---LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
+A EE +A L+ G ++A PT+T+YG + + A RIYE KGR +PL + V
Sbjct: 12 KAQREELARAGKVLRGGGLVAFPTETVYGLGANGLDAAACARIYEAKGRPSDNPLILHVS 71
Query: 81 DVSDINRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
D + + A + LL + +PGP+T++L R + + + GL+++G+R+P+
Sbjct: 72 DRAMVEMIAAEVTPMAEKLLAAFMPGPITLILRR--KAIVPDRITGGLDTVGIRMPEHPV 129
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDL 198
R + R +A SAN++G+PS + ++ R + DGG G ST+VD
Sbjct: 130 ARAMIRAAGVPIAAPSANISGRPSPTTAASVLRDMDGRIPLILDGGPCHFG-VESTIVDC 188
Query: 199 TRLGKFK-ILRPGSAKEETI 217
T G ILRPG+ E +
Sbjct: 189 T--GPVAVILRPGAITREML 206
>gi|23501309|ref|NP_697436.1| Sua5/YciO/YrdC family protein [Brucella suis 1330]
gi|62289392|ref|YP_221185.1| Sua5/YciO/YrdC family protein [Brucella abortus bv. 1 str. 9-941]
gi|82699320|ref|YP_413894.1| Sua5/YciO/YrdC/YwlC family protein:SUA5 [Brucella melitensis biovar
Abortus 2308]
gi|161618380|ref|YP_001592267.1| Sua5/YciO/YrdC/YwlC family protein [Brucella canis ATCC 23365]
gi|163842687|ref|YP_001627091.1| Sua5/YciO/YrdC/YwlC family protein [Brucella suis ATCC 23445]
gi|189023644|ref|YP_001934412.1| Sua5/YciO/YrdC/YwlC protein family [Brucella abortus S19]
gi|225626914|ref|ZP_03784953.1| Sua5/YciO/YrdC/YwlC family protein [Brucella ceti str. Cudo]
gi|237814879|ref|ZP_04593877.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus str. 2308 A]
gi|260545856|ref|ZP_05821597.1| Sua5/YciO/YrdC/YwlC protein family [Brucella abortus NCTC 8038]
gi|260566987|ref|ZP_05837457.1| Sua5/YciO/YrdC/YwlC protein family [Brucella suis bv. 4 str. 40]
gi|260754183|ref|ZP_05866531.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 6 str.
870]
gi|260757403|ref|ZP_05869751.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 4 str.
292]
gi|260761228|ref|ZP_05873571.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883208|ref|ZP_05894822.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 9 str.
C68]
gi|261218418|ref|ZP_05932699.1| Sua5/YciO/YrdC/YwlC family protein [Brucella ceti M13/05/1]
gi|261315352|ref|ZP_05954549.1| Sua5/YciO/YrdC/YwlC family protein [Brucella pinnipedialis
M163/99/10]
gi|261320733|ref|ZP_05959930.1| Sua5/YciO/YrdC/YwlC family protein [Brucella ceti M644/93/1]
gi|261751751|ref|ZP_05995460.1| Sua5/YciO/YrdC/YwlC family protein [Brucella suis bv. 5 str. 513]
gi|261754405|ref|ZP_05998114.1| Sua5/YciO/YrdC/YwlC family protein [Brucella suis bv. 3 str. 686]
gi|261757638|ref|ZP_06001347.1| Sua5/YciO/YrdC/YwlC protein family [Brucella sp. F5/99]
gi|265988119|ref|ZP_06100676.1| Sua5/YciO/YrdC/YwlC family protein [Brucella pinnipedialis
M292/94/1]
gi|294851786|ref|ZP_06792459.1| translation factor [Brucella sp. NVSL 07-0026]
gi|297247805|ref|ZP_06931523.1| translation factor [Brucella abortus bv. 5 str. B3196]
gi|340790047|ref|YP_004755511.1| SUA5/YciO/YrdC/YwlC family protein [Brucella pinnipedialis B2/94]
gi|376273851|ref|YP_005152429.1| translation factor [Brucella abortus A13334]
gi|376274834|ref|YP_005115273.1| translation factor [Brucella canis HSK A52141]
gi|376280098|ref|YP_005154104.1| Sua5/YciO/YrdC family protein [Brucella suis VBI22]
gi|384224092|ref|YP_005615256.1| Sua5/YciO/YrdC family protein [Brucella suis 1330]
gi|423167437|ref|ZP_17154140.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI435a]
gi|423170187|ref|ZP_17156862.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI474]
gi|423173733|ref|ZP_17160404.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI486]
gi|423176982|ref|ZP_17163628.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI488]
gi|423179620|ref|ZP_17166261.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI010]
gi|423182750|ref|ZP_17169387.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI016]
gi|423186307|ref|ZP_17172921.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI021]
gi|423189445|ref|ZP_17176055.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI259]
gi|23347198|gb|AAN29351.1| Sua5/YciO/YrdC family protein [Brucella suis 1330]
gi|62195524|gb|AAX73824.1| Sua5/YciO/YrdC family protein [Brucella abortus bv. 1 str. 9-941]
gi|82615421|emb|CAJ10390.1| Sua5/YciO/YrdC/YwlC protein family:SUA5:SUA5/yciO/yrdC, N-terminal
[Brucella melitensis biovar Abortus 2308]
gi|161335191|gb|ABX61496.1| Sua5/YciO/YrdC/YwlC family protein [Brucella canis ATCC 23365]
gi|163673410|gb|ABY37521.1| Sua5/YciO/YrdC/YwlC family protein [Brucella suis ATCC 23445]
gi|189019216|gb|ACD71938.1| Sua5/YciO/YrdC/YwlC protein family [Brucella abortus S19]
gi|225618571|gb|EEH15614.1| Sua5/YciO/YrdC/YwlC family protein [Brucella ceti str. Cudo]
gi|237789716|gb|EEP63926.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus str. 2308 A]
gi|260097263|gb|EEW81138.1| Sua5/YciO/YrdC/YwlC protein family [Brucella abortus NCTC 8038]
gi|260156505|gb|EEW91585.1| Sua5/YciO/YrdC/YwlC protein family [Brucella suis bv. 4 str. 40]
gi|260667721|gb|EEX54661.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 4 str.
292]
gi|260671660|gb|EEX58481.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674291|gb|EEX61112.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 6 str.
870]
gi|260872736|gb|EEX79805.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 9 str.
C68]
gi|260923507|gb|EEX90075.1| Sua5/YciO/YrdC/YwlC family protein [Brucella ceti M13/05/1]
gi|261293423|gb|EEX96919.1| Sua5/YciO/YrdC/YwlC family protein [Brucella ceti M644/93/1]
gi|261304378|gb|EEY07875.1| Sua5/YciO/YrdC/YwlC family protein [Brucella pinnipedialis
M163/99/10]
gi|261737622|gb|EEY25618.1| Sua5/YciO/YrdC/YwlC protein family [Brucella sp. F5/99]
gi|261741504|gb|EEY29430.1| Sua5/YciO/YrdC/YwlC family protein [Brucella suis bv. 5 str. 513]
gi|261744158|gb|EEY32084.1| Sua5/YciO/YrdC/YwlC family protein [Brucella suis bv. 3 str. 686]
gi|264660316|gb|EEZ30577.1| Sua5/YciO/YrdC/YwlC family protein [Brucella pinnipedialis
M292/94/1]
gi|294820375|gb|EFG37374.1| translation factor [Brucella sp. NVSL 07-0026]
gi|297174974|gb|EFH34321.1| translation factor [Brucella abortus bv. 5 str. B3196]
gi|340558505|gb|AEK53743.1| SUA5/YciO/YrdC/YwlC family protein [Brucella pinnipedialis B2/94]
gi|343382272|gb|AEM17764.1| Sua5/YciO/YrdC family protein [Brucella suis 1330]
gi|358257697|gb|AEU05432.1| Sua5/YciO/YrdC family protein [Brucella suis VBI22]
gi|363401457|gb|AEW18427.1| translation factor [Brucella abortus A13334]
gi|363403401|gb|AEW13696.1| translation factor [Brucella canis HSK A52141]
gi|374540871|gb|EHR12370.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI435a]
gi|374541479|gb|EHR12974.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI486]
gi|374542423|gb|EHR13912.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI474]
gi|374551139|gb|EHR22574.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI010]
gi|374551596|gb|EHR23030.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI016]
gi|374552732|gb|EHR24155.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI488]
gi|374557364|gb|EHR28761.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI259]
gi|374557986|gb|EHR29380.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 1 str.
NI021]
Length = 323
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL V ++ R+
Sbjct: 14 RAVEVLRRGGLVAIPTETVYGLAADAANGEGVAGIFAAKGRPQFNPLIAHVDGIAMAGRY 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVIA 144
D + L ++ PGP+T+VL E + E+ ++P GL ++ VR+P VR +
Sbjct: 74 VAFDPVSRRLAEAFWPGPLTIVLPLKERQDTERPIHPLVTAGLSTLAVRMPHGR-VRDVI 132
Query: 145 RGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
L+S +A SAN +G+ S S +L R + D G P G + + +
Sbjct: 133 TALDSPVAAPSANTSGRISPTSAAAVAGDLGGRIDLILDAG--PCGVGVESTIVKVDGDQ 190
Query: 204 FKILRPGS-AKEETIAIL 220
+LRPG A EE A L
Sbjct: 191 VHLLRPGGLAAEEIEAFL 208
>gi|269925890|ref|YP_003322513.1| Sua5/YciO/YrdC/YwlC family protein [Thermobaculum terrenum ATCC
BAA-798]
gi|269789550|gb|ACZ41691.1| Sua5/YciO/YrdC/YwlC family protein [Thermobaculum terrenum ATCC
BAA-798]
Length = 205
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 110/196 (56%), Gaps = 7/196 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+AI G++IA PTDT+YG +AV++IY K R P+ I + D S + ++
Sbjct: 15 QAIDFALKGELIAFPTDTVYGVGS-IVDPQAVSKIYRAKERPLDKPIPILLSDDSYLEKY 73
Query: 89 AV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A D + L + PG +T+V+ E ++ +++ ++G R+PD R I R
Sbjct: 74 AKDIDAIAMELARTFWPGALTLVVRARE--DVAEAVGSKDGTVGFRIPDYEPAREIIRQC 131
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
A+A+TSAN++G+ + ++ D E +L +R A + DGG G+ STVVDL++ K I
Sbjct: 132 GGAMAVTSANISGERNPLTADDVEHDLGDRVAIILDGGPCRIGKP-STVVDLSK-EKPLI 189
Query: 207 LRPGSAKEETIAILEK 222
+R G+ E+ AILEK
Sbjct: 190 VRKGALAEQIRAILEK 205
>gi|418004871|ref|ZP_12644877.1| putative RNA-binding protein [Lactobacillus casei UW1]
gi|410548442|gb|EKQ22643.1| putative RNA-binding protein [Lactobacillus casei UW1]
Length = 333
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 4/201 (1%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ EA ALK G+++A PT+T+YG DA + AV ++Y KGR +PL + V D
Sbjct: 7 ESDIPEAAAALKRGELVAFPTETVYGLGADATNVTAVGKVYAAKGRPSDNPLIVTVADAE 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ ++A L L+++ PGP+T++L+ L + GL++ R PD+ R +
Sbjct: 67 MVGQYATITPLAAKLMEAFWPGPLTIILNI-LPGRLSMKVTGGLQTAAFRNPDNALTRKL 125
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ SAN +G+PS + +L + A V D G G S ++DLT +
Sbjct: 126 IATAGVPIVGPSANTSGKPSPTTADHVLHDLDGKIAGVLDDGPTQVG-VESAIIDLT-VT 183
Query: 203 KFKILRPGSAKEETIAILEKH 223
ILRPG+ + + L H
Sbjct: 184 PPAILRPGAIGPDELEPLIGH 204
>gi|254796933|ref|YP_003081770.1| Sua5/YciO/YrdC/YwlC family protein [Neorickettsia risticii str.
Illinois]
gi|254590181|gb|ACT69543.1| Sua5/YciO/YrdC/YwlC family protein [Neorickettsia risticii str.
Illinois]
Length = 195
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
E + L+ G V+ PT+T+Y ACDA + A+ RIY+IK R L + V +S + F
Sbjct: 4 ETVSLLRVGGVVIFPTETVYALACDASNYRAMLRIYDIKQRNIKKNLPVMVAGISQLESF 63
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A + L+ PGPVT +L R +S++L E + VRVPDS I RG
Sbjct: 64 ASFNESQARLIKECCPGPVTFILKRKKSAHLRFRFP---EKVAVRVPDSKVALKILRGFN 120
Query: 149 SALALTSANLTGQPS 163
+ TS NL+G+P+
Sbjct: 121 RPVFATSVNLSGRPA 135
>gi|191638152|ref|YP_001987318.1| translation factor SUA5 [Lactobacillus casei BL23]
gi|239631746|ref|ZP_04674777.1| translation factor SUA5 [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301066211|ref|YP_003788234.1| translation factor [Lactobacillus casei str. Zhang]
gi|385819855|ref|YP_005856242.1| Putative translation factor (SUA5) [Lactobacillus casei LC2W]
gi|385823052|ref|YP_005859394.1| Putative translation factor (SUA5) [Lactobacillus casei BD-II]
gi|409997018|ref|YP_006751419.1| tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
[Lactobacillus casei W56]
gi|417980469|ref|ZP_12621149.1| putative RNA-binding protein [Lactobacillus casei 12A]
gi|418010583|ref|ZP_12650358.1| putative RNA-binding protein [Lactobacillus casei Lc-10]
gi|190712454|emb|CAQ66460.1| Translation factor SUA5 [Lactobacillus casei BL23]
gi|239526211|gb|EEQ65212.1| translation factor SUA5 [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300438618|gb|ADK18384.1| Putative translation factor (SUA5) [Lactobacillus casei str. Zhang]
gi|327382182|gb|AEA53658.1| Putative translation factor (SUA5) [Lactobacillus casei LC2W]
gi|327385379|gb|AEA56853.1| Putative translation factor (SUA5) [Lactobacillus casei BD-II]
gi|406358030|emb|CCK22300.1| Probable tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
[Lactobacillus casei W56]
gi|410524792|gb|EKP99699.1| putative RNA-binding protein [Lactobacillus casei 12A]
gi|410553823|gb|EKQ27816.1| putative RNA-binding protein [Lactobacillus casei Lc-10]
Length = 333
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 4/201 (1%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ EA ALK G+++A PT+T+YG DA + AV ++Y KGR +PL + V D
Sbjct: 7 ESDIPEAAAALKRGELVAFPTETVYGLGADATNVTAVGKVYAAKGRPSDNPLIVTVADAE 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ ++A L L+++ PGP+T++L+ L + GL++ R PD+ R +
Sbjct: 67 MVGQYATITPLAAKLMEAFWPGPLTIILNI-LPGRLSMKVTGGLQTAAFRNPDNALTRKL 125
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ SAN +G+PS + +L + A V D G G S ++DLT +
Sbjct: 126 IATAGVPIVGPSANTSGKPSPTTADHVLHDLDGKIAGVLDDGPTQVG-VESAIIDLT-VT 183
Query: 203 KFKILRPGSAKEETIAILEKH 223
ILRPG+ + + L H
Sbjct: 184 PPAILRPGAIGPDELEPLIGH 204
>gi|417989402|ref|ZP_12629908.1| putative translation factor [Lactobacillus casei A2-362]
gi|410538491|gb|EKQ13044.1| putative translation factor [Lactobacillus casei A2-362]
Length = 333
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 4/201 (1%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ EA ALK G+++A PT+T+YG DA + AV ++Y KGR +PL + V D
Sbjct: 7 ESDIPEAAAALKRGELVAFPTETVYGLGADATNVTAVGKVYAAKGRPSDNPLIVTVADAD 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ ++A L L+++ PGP+T++L+ L + GL++ R PD+ R +
Sbjct: 67 MVGQYAAITPLAAKLMEAFWPGPLTIILNI-LPGRLSMKVTGGLQTAAFRNPDNALTRKL 125
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ SAN +G+PS + +L + A V D G G S ++DLT +
Sbjct: 126 IATAGVPIVGPSANTSGKPSPTTADHVLHDLDGKIAGVLDDGPTQVG-VESAIIDLT-VT 183
Query: 203 KFKILRPGSAKEETIAILEKH 223
ILRPG+ + + L H
Sbjct: 184 PPAILRPGAIGPDELEPLIGH 204
>gi|300172698|ref|YP_003771863.1| putative translation factor [Leuconostoc gasicomitatum LMG 18811]
gi|299887076|emb|CBL91044.1| Putative translation factor (Sua5 family) [Leuconostoc
gasicomitatum LMG 18811]
Length = 335
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 99/185 (53%), Gaps = 4/185 (2%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
L+ G+V+A PT+T+YG DA + AV +++ KGR +PL + + D ++ F +
Sbjct: 18 LRAGEVVAFPTETVYGLGADATNETAVKKVFTAKGRPADNPLIMTIADEKQLDEFVLISQ 77
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L+ + PG +T++L + + + GL+++ R+PD++ RV+ R +
Sbjct: 78 AARQLMTAFWPGSLTIILPI-KPKKVAMIVTGGLQTVAFRLPDNDVARVVIRDAGVPIVG 136
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSA 212
SAN +G+PS + + + ++ + A + D G G STV+D++ ILRPG+
Sbjct: 137 PSANTSGKPSPTTAQHVWHDMNGKIAAIVDDGPTQIG-VESTVIDMSA-NVPTILRPGAV 194
Query: 213 KEETI 217
++ +
Sbjct: 195 TQQQL 199
>gi|422417023|ref|ZP_16493980.1| protein Sua5 [Listeria innocua FSL J1-023]
gi|313622340|gb|EFR92826.1| protein Sua5 [Listeria innocua FSL J1-023]
Length = 345
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 107/194 (55%), Gaps = 9/194 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A + L+ G+ +A PT+T+YG DA + A+ +IY KGR +PL + + +++
Sbjct: 19 QKAAELLQNGECVAFPTETVYGLGADATNQAAIQKIYAAKGRPSDNPLIVHIAKREQMDQ 78
Query: 88 FAVTDHLPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
F + + P L+++ PGP+TV+L + S L +++ GL ++GVR+P+ +
Sbjct: 79 F-IASYPPKALQLMEAFWPGPLTVILPLKKDS-LAANVSAGLSTVGVRMPEHPVSLELIA 136
Query: 146 GLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGK 203
+A SAN +G+PS + + E+L A + DGG P+G STV+D + L
Sbjct: 137 TANIPIAAPSANRSGKPSPTTAEHVIEDLDGEVAGIIDGG--PTGVGLESTVIDCS-LDV 193
Query: 204 FKILRPGSAKEETI 217
ILRPG +E I
Sbjct: 194 PIILRPGGITKEQI 207
>gi|126728298|ref|ZP_01744114.1| Sua5/YciO/YrdC family protein [Sagittula stellata E-37]
gi|126711263|gb|EBA10313.1| Sua5/YciO/YrdC family protein [Sagittula stellata E-37]
Length = 328
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A L+ G+++A PT+T+YG DA AV IY KGR +PL + D+ +
Sbjct: 31 RAASLLRDGRLVAFPTETVYGLGADARDDHAVAAIYAAKGRPSFNPLIVHFADLDALKPM 90
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
+ +S PGP+T+VL E + + K + GL++I VR+P + R + R
Sbjct: 91 VTWSDEAEAIAESFWPGPLTLVLPLREGARVSKLVTAGLDTIAVRMPAAPVARDLLRAAG 150
Query: 149 SALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A SAN++GQ S + +L +R + DGG G ST++ L G+ +L
Sbjct: 151 VPVAAPSANVSGQISPTRAEHVAASLGDRVDAILDGGPCKVGLE-STILGLA--GRPTLL 207
Query: 208 RPGSAKEETIA------ILEKH 223
RPG E + I E+H
Sbjct: 208 RPGGITREALGHVLGRRIAERH 229
>gi|152977511|ref|YP_001377028.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cytotoxicus NVH
391-98]
gi|152026263|gb|ABS24033.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cytotoxicus NVH
391-98]
Length = 347
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + L+ + +A PT+T+YG +A + EA+ +I+E KGR +PL + +G S +
Sbjct: 22 QEAAKLLRENEAVAFPTETVYGLGANAMNDEAIVKIFEAKGRPSDNPLIVHIGSKSQLTD 81
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L + + + + + GL+++GVR+PD +
Sbjct: 82 --IVREVPPVAEVLMKHFWPGPLTIILPKKDG--ISEKVTAGLDTVGVRMPDHEVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EAANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSKVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|366086229|ref|ZP_09452714.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus zeae KCTC 3804]
Length = 340
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 99/191 (51%), Gaps = 8/191 (4%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ EA ALK G+++A PT+T+YG DA + +AV ++Y KGR +PL + V D +
Sbjct: 7 ESDIPEAAAALKRGELVAFPTETVYGLGADATNVDAVGKVYAAKGRPSDNPLIVTVADAA 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ ++A L+ + PGP+T++L+ L + GL++ R PD+ R +
Sbjct: 67 MVGQYATITPAAAKLMATFWPGPLTMILNI-LPGRLSMKVTGGLQTAAFRNPDNALTRKL 125
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAG--STVVDLTR 200
+ SAN +G+PS + +L + A V D G R G ST+VDLT
Sbjct: 126 IATAGVPIVGPSANTSGKPSPTTADHVLHDLSGKIAGVLDDG---PTRVGVESTIVDLT- 181
Query: 201 LGKFKILRPGS 211
+ ILRPG+
Sbjct: 182 VTPPAILRPGA 192
>gi|261317082|ref|ZP_05956279.1| Sua5/YciO/YrdC/YwlC family protein, partial [Brucella pinnipedialis
B2/94]
gi|261296305|gb|EEX99801.1| Sua5/YciO/YrdC/YwlC family protein [Brucella pinnipedialis B2/94]
Length = 242
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL V ++ R+
Sbjct: 14 RAVEVLRRGGLVAIPTETVYGLAADAANGEGVAGIFAAKGRPQFNPLIAHVDGIAMAGRY 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVIA 144
D + L ++ PGP+T+VL E + E+ ++P GL ++ VR+P VR +
Sbjct: 74 VAFDPVSRRLAEAFWPGPLTIVLPLKERQDTERPIHPLVTAGLSTLAVRMPHGR-VRDVI 132
Query: 145 RGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
L+S +A SAN +G+ S S +L R + D G P G + + +
Sbjct: 133 TALDSPVAAPSANTSGRISPTSAAAVAGDLGGRIDLILDAG--PCGVGVESTIVKVDGDQ 190
Query: 204 FKILRPGS-AKEETIAIL 220
+LRPG A EE A L
Sbjct: 191 VHLLRPGGLAAEEIEAFL 208
>gi|148559471|ref|YP_001258429.1| Sua5/YciO/YrdC family protein [Brucella ovis ATCC 25840]
gi|148370728|gb|ABQ60707.1| Sua5/YciO/YrdC family protein [Brucella ovis ATCC 25840]
Length = 323
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 9/198 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL V ++ R+
Sbjct: 14 RAVEVLRRGGLVAIPTETVYGLAADAANGEGVAGIFAAKGRPQFNPLIAHVDGIAMAGRY 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVIA 144
D + L ++ PGP+T+VL E + E+ ++P GL ++ VR+P VR +
Sbjct: 74 VAFDPVSRRLAEAFWPGPLTIVLPLKERQDTERPIHPLVTAGLSTLAVRMPHGR-VRDVI 132
Query: 145 RGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
L+S +A SAN +G+ S S +L R + D G G ST+V + +
Sbjct: 133 TALDSPVAAPSANTSGRISPTSAAAVAGDLGGRIDLILDAGPCSVG-VESTIVKVDG-DQ 190
Query: 204 FKILRPGS-AKEETIAIL 220
+LRPG A EE A L
Sbjct: 191 VHLLRPGGLAAEEIEAFL 208
>gi|14521794|ref|NP_127270.1| sua5 related protein [Pyrococcus abyssi GE5]
gi|5459014|emb|CAB50500.1| Putative translation factor, SUA5 related protein [Pyrococcus
abyssi GE5]
gi|380742421|tpe|CCE71055.1| TPA: sua5 related protein [Pyrococcus abyssi GE5]
Length = 340
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 10/188 (5%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
++ GK++A PT+T+YG +A AV RI+E KGR +PL I + + A
Sbjct: 23 IREGKLVAFPTETVYGLGANALDENAVKRIFEAKGRPADNPLIIHIASFEQLEVLA--KE 80
Query: 94 LPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA 150
+P L PGP+T+VL + E + + + GL+++ VR+P + E
Sbjct: 81 IPEEAEMLAKRFWPGPLTLVLPKSEV--VPRVITGGLDTVAVRMPAHEIALKLIELSERP 138
Query: 151 LALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRP 209
+A SAN++G+PS S E+ + + C+ DGG G STV+DLT +LRP
Sbjct: 139 IAAPSANISGKPSPTSAHHVAEDFYGKIECIIDGGETRIG-VESTVIDLTEWPPV-LLRP 196
Query: 210 GSAKEETI 217
G E I
Sbjct: 197 GGLPLEEI 204
>gi|73668440|ref|YP_304455.1| translation factor SUA5 [Methanosarcina barkeri str. Fusaro]
gi|72395602|gb|AAZ69875.1| translation factor SUA5 [Methanosarcina barkeri str. Fusaro]
Length = 367
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 107/195 (54%), Gaps = 12/195 (6%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A +K G +A PT+T+YG D + EAV +I+E K R +PL++ V D+ +
Sbjct: 26 ERASAIIKRGGTVAFPTETVYGLGADGLNPEAVMKIFEAKKRPPGNPLSLLVHSREDVEK 85
Query: 88 FAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPG-LESIGVRVPDSNFVRVI 143
V ++P L+++ PGP+T++L E +++ + G L+SIGVR+PD +
Sbjct: 86 --VARNIPESAFRLMNAFWPGPLTIIL---EKNDIVPDITSGRLKSIGVRMPDHRVPLDL 140
Query: 144 ARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ + LA SANL+G+PS S++ +L R + DGG G STV+D+T +
Sbjct: 141 IKRAGTPLAAPSANLSGKPSPSLAAHVISDLTGRIDAILDGGEAAIGLE-STVIDMT-VE 198
Query: 203 KFKILRPGSAKEETI 217
+LRPG+ E +
Sbjct: 199 PPVVLRPGAVSFEEL 213
>gi|423100810|ref|ZP_17088516.1| Sua5/YciO/YrdC/YwlC family protein [Listeria innocua ATCC 33091]
gi|370792616|gb|EHN60472.1| Sua5/YciO/YrdC/YwlC family protein [Listeria innocua ATCC 33091]
Length = 345
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 107/194 (55%), Gaps = 9/194 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A + L+ G+ +A PT+T+YG DA + A+ +IY KGR +PL + + +++
Sbjct: 19 QKAAELLQNGECVAFPTETVYGLGADATNQAAIQKIYAAKGRPSDNPLIVHIAKREQMDQ 78
Query: 88 FAVTDHLPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
F + + P L+++ PGP+TV+L + S L +++ GL ++GVR+P+ +
Sbjct: 79 F-IASYPPKALQLMEAFWPGPLTVILPLKKDS-LAANVSAGLSTVGVRMPEHPVSLELIA 136
Query: 146 GLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGK 203
+A SAN +G+PS + + E+L A + DGG P+G STV+D + L
Sbjct: 137 TANIPIAAPSANRSGKPSPTTAEHVIEDLDGEIAGIIDGG--PTGVGLESTVIDCS-LDV 193
Query: 204 FKILRPGSAKEETI 217
ILRPG +E I
Sbjct: 194 PIILRPGGITKEQI 207
>gi|222478840|ref|YP_002565077.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum lacusprofundi ATCC
49239]
gi|222451742|gb|ACM56007.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum lacusprofundi ATCC
49239]
Length = 199
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 6/169 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A +A+ G ++ PT+T+YG DA AV R++++KGR+ ++PL++ V V R+
Sbjct: 11 AAEAVADGDLVVYPTETVYGLGGDALDPTAVERVFDLKGRERSNPLSLGVPSVDAALRYT 70
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ LPGPVTVV+ RG+ + +L G + +GVRVPD R + R
Sbjct: 71 KPTEFAVAFARAFLPGPVTVVVERGDP--VPDALTAGSDRVGVRVPDHPIARDLLRET-G 127
Query: 150 ALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVD 197
L TSAN++G+ S D ++ + E A V D G P STVVD
Sbjct: 128 PLTATSANVSGRGSVTHPDDLDDRIREGVAVVIDDGETPGTE--STVVD 174
>gi|372486789|ref|YP_005026354.1| Sua5/YciO/YrdC/YwlC family protein [Dechlorosoma suillum PS]
gi|359353342|gb|AEV24513.1| Sua5/YciO/YrdC/YwlC family protein [Dechlorosoma suillum PS]
Length = 336
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 13/205 (6%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
P + A + A+Q L+ G+++ +PT+T+YG DA ++EAV +I+ KGR PL + +
Sbjct: 10 PPSPADIDRAVQLLQAGELVGIPTETVYGLGADASNAEAVAKIFAAKGRPADHPLIVHLP 69
Query: 81 DVSDINRFA--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
I R+A + D + L +S PGP+T++L + + ++ G +++G+RVP
Sbjct: 70 GHDWIERWAADIPDAV-WELAESFWPGPLTLILKK--QPWVPDAVTGGQDTVGLRVPGHP 126
Query: 139 FVRVIARGLESA-----LALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAG 192
+ R A +A SAN G+ S + + + L ER + DGG P G
Sbjct: 127 VALALLRAFAQAGGSGGVAAPSANRFGRISPTAAQHVADELGERVPFILDGGACPVGIE- 185
Query: 193 STVVDLTRLGKFKILRPGSAKEETI 217
ST++D + G ++LRPG E I
Sbjct: 186 STIIDFSS-GVPRLLRPGHITPEQI 209
>gi|303234993|ref|ZP_07321617.1| Sua5/YciO/YrdC/YwlC family protein [Finegoldia magna BVS033A4]
gi|302493848|gb|EFL53630.1| Sua5/YciO/YrdC/YwlC family protein [Finegoldia magna BVS033A4]
Length = 342
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 103/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD---VSD 84
E+A + +K G V+A PT+T+YG + EA +I+++K RK +PL + V + V +
Sbjct: 18 EKAAELIKNGSVVAFPTETVYGLGANGLDEEACKKIFDVKRRKRDNPLILHVTNEDMVKN 77
Query: 85 INRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
++ D L+D+L PGP+T++ + + N ++ G +++ +R P R +
Sbjct: 78 LSSEITEDQ--KKLMDNLWPGPLTIIFKKSDKVN--DVVSCGGDTVAIRNPSDEIARFLI 133
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS + +D + ++ + + DGG G STVVDLT
Sbjct: 134 DKSGCPIAAPSANKSGRPSPTNAQDVYSDMQDEIEMILDGGSCNIG-IESTVVDLTE-KP 191
Query: 204 FKILRPGSAKEETI 217
+ ILRPG +E +
Sbjct: 192 YTILRPGFYTKEDL 205
>gi|289550269|ref|YP_003471173.1| Sua5 YciO YrdC YwlC family protein [Staphylococcus lugdunensis
HKU09-01]
gi|385783897|ref|YP_005760070.1| hypothetical protein SLUG_09510 [Staphylococcus lugdunensis
N920143]
gi|418415220|ref|ZP_12988426.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|418636135|ref|ZP_13198487.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus lugdunensis
VCU139]
gi|289179801|gb|ADC87046.1| Sua5 YciO YrdC YwlC family protein [Staphylococcus lugdunensis
HKU09-01]
gi|339894153|emb|CCB53417.1| conserved hypothetical protein [Staphylococcus lugdunensis N920143]
gi|374841134|gb|EHS04613.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus lugdunensis
VCU139]
gi|410875227|gb|EKS23152.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 344
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 12/201 (5%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
+ +E + G +IA+PT+T+YG +A EAV +IYE KGR +PL + + D +
Sbjct: 20 YLDEIKHVYEQGGLIALPTETVYGLGANAKDQEAVTKIYEAKGRPSDNPLIVHIYDQQQL 79
Query: 86 NRF--AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
F +TD + L++ PGP++ +L EK + GL+SI VR+P R I
Sbjct: 80 TPFIETITDKV-QILMNYFWPGPISFILPLKRGYLCEK-VTGGLDSIAVRMPSHPIGRAI 137
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDG---GVLPSGRAGSTVVDLTR 200
+ ++ +A SAN +G+PS + F++++ DG G STV+D T
Sbjct: 138 LKYVDLPIAAPSANTSGKPSPTT---FDHVYHDLNGKIDGIINGDQSEEGLESTVLDCTT 194
Query: 201 LGKFKILRPGSAKEETI-AIL 220
FKI RPG+ + I AIL
Sbjct: 195 Y-PFKIARPGAITQSMINAIL 214
>gi|409095082|ref|ZP_11215106.1| sua5 superfamily-like protein [Thermococcus zilligii AN1]
Length = 340
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 10/181 (5%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
L+ G ++A PT+T+YG DA + A RI+E KGR +PL + + +V + + A
Sbjct: 23 LRRGGLVAFPTETVYGLGADALNESATRRIFEAKGRPADNPLIVHIAEVEWLEKLA--KE 80
Query: 94 LPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA 150
+P L + PGP+T+VL ++ + ++ GL+++ VR+P + R
Sbjct: 81 VPEKAWELAEKFWPGPLTIVLPARDT--VPRTTTGGLDTVAVRMPAHPIALELIRLSNVP 138
Query: 151 LALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRP 209
+A SAN++G+PS S E+ + + C+ DGG P G STV+DLT +LRP
Sbjct: 139 VAAPSANISGRPSPTSADHVIEDFYGKIDCIVDGGETPIG-VESTVIDLTSEVPV-LLRP 196
Query: 210 G 210
G
Sbjct: 197 G 197
>gi|322418699|ref|YP_004197922.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter sp. M18]
gi|320125086|gb|ADW12646.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter sp. M18]
Length = 202
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+ ++ LK G V+A PTDT YG C S + + RIY+IK R P + D+S+I+R+
Sbjct: 17 KVVEILKNGGVVAYPTDTTYGIGCSIFSKKGIERIYQIKQRDRKKPFSFICSDMSEISRY 76
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A + L LLPGP T VL +S + + ++G+RVPD+ I + L
Sbjct: 77 ARVSNYAFKQLRRLLPGPYTFVLE--ANSVVPDLVTTKQRTVGIRVPDNKICLAIVKELG 134
Query: 149 SALALTSANLTGQ 161
+ + TSANL+G+
Sbjct: 135 APIVTTSANLSGE 147
>gi|315660271|ref|ZP_07913126.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus lugdunensis
M23590]
gi|315494698|gb|EFU83038.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus lugdunensis
M23590]
Length = 344
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 12/201 (5%)
Query: 26 HAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI 85
+ +E + G +IA+PT+T+YG +A EAV +IYE KGR +PL + + D +
Sbjct: 20 YLDEIKHVYEQGGLIALPTETVYGLGANAKDQEAVTKIYEAKGRPSDNPLIVHIYDQQQL 79
Query: 86 NRF--AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
F +TD + L++ PGP++ +L EK + GL+SI VR+P R I
Sbjct: 80 TPFIETITDKV-QILMNYFWPGPISFILPLKRGYLCEK-VTGGLDSIAVRMPSHPIGRAI 137
Query: 144 ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDG---GVLPSGRAGSTVVDLTR 200
+ ++ +A SAN +G+PS + F++++ DG G STV+D T
Sbjct: 138 LKYVDLPIAAPSANTSGKPSPTT---FDHVYHDLNGKIDGIINGDQSEEGLESTVLDCTT 194
Query: 201 LGKFKILRPGSAKEETI-AIL 220
FKI RPG+ + I AIL
Sbjct: 195 Y-PFKIARPGAITQSMINAIL 214
>gi|223477815|ref|YP_002582323.1| sua5 superfamily-like protein [Thermococcus sp. AM4]
gi|214033041|gb|EEB73869.1| sua5 superfamily-related protein [Thermococcus sp. AM4]
Length = 343
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 103/196 (52%), Gaps = 12/196 (6%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + ++ GK++A PT+T+YG DA + +AV RI+E KGR +PL I + + + F
Sbjct: 18 AARLIREGKLVAFPTETVYGLGADALNEKAVRRIFEAKGRPADNPLIIHIAEREWL--FE 75
Query: 90 VTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ +P L + PGP+T+VL +GE + GL+++ VR+P + R
Sbjct: 76 LARDIPEKALELAERFWPGPLTLVLPKGE--RVPSVTTGGLDTVAVRMPAHPIALELIRL 133
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN++G+PS ++ + R C+ DGG G STV+DLT G
Sbjct: 134 SGRPVAAPSANISGKPSPTDADHVVDDFYGRIECIVDGGPTWIG-VESTVLDLT--GDVP 190
Query: 206 I-LRPGSAKEETIAIL 220
+ LRPG E I ++
Sbjct: 191 VLLRPGGLPLEEIEMV 206
>gi|261324536|ref|ZP_05963733.1| Sua5/YciO/YrdC/YwlC family protein [Brucella neotomae 5K33]
gi|261300516|gb|EEY04013.1| Sua5/YciO/YrdC/YwlC family protein [Brucella neotomae 5K33]
Length = 323
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL V ++ R+
Sbjct: 14 RAVEVLRRGGLVAIPTETVYGLAADAANGEGVAGIFAAKGRPQFNPLIAHVDGIAMAGRY 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVIA 144
D + L ++ PGP+T+VL E + E+ ++P GL ++ VR+P VR +
Sbjct: 74 VAFDPVSRRLAEAFWPGPLTIVLPLKERQDTERPIHPLVTAGLSTLAVRMPHGR-VRDVI 132
Query: 145 RGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
L+S +A SAN +G+ S S +L R + D G P G + + +
Sbjct: 133 TALDSPVAAPSANTSGRISPTSAAAVAGDLGGRIDLILDAG--PCGVGVESTIVKVDGDQ 190
Query: 204 FKILRPGS-AKEETIAIL 220
+LRPG A EE A L
Sbjct: 191 VYLLRPGGLAAEEIEAFL 208
>gi|448367337|ref|ZP_21555103.1| Sua5/YciO/YrdC/YwlC family protein [Natrialba aegyptia DSM 13077]
gi|445652956|gb|ELZ05829.1| Sua5/YciO/YrdC/YwlC family protein [Natrialba aegyptia DSM 13077]
Length = 194
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A++ G+++ PT+T+YG DA +S+AV+R+++ KGR H+ P+++ V V +
Sbjct: 5 DRAADAIRDGELVVYPTETVYGLGADALNSDAVDRVFDAKGRDHSKPISLAVPSVPAALQ 64
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ + + LPGPVTV+ E + + L G + +GVRVPD +
Sbjct: 65 YVRATERERRFMATFLPGPVTVLCRAREP--VPEVLTAGRDRVGVRVPDHPTALALCERA 122
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
E+ + TSAN++G+ S + + + E A DGG P S+VVD T I
Sbjct: 123 ETPITATSANVSGRGSVRRLDELDPEFREATAATLDGGETPGTE--SSVVDPT---NETI 177
Query: 207 LRPGSAKEETIAILEKH 223
R G+ ++ E H
Sbjct: 178 HRRGTLADDIETWFETH 194
>gi|354558871|ref|ZP_08978124.1| Sua5/YciO/YrdC/YwlC family protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353545195|gb|EHC14647.1| Sua5/YciO/YrdC/YwlC family protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 348
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 117/216 (54%), Gaps = 13/216 (6%)
Query: 5 LENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIY 64
+E +V ++++A P +E + EEA + ++ G+++A PT+T+YG +A ++A I+
Sbjct: 1 METKRVYIDSQA----PESE-YIEEAAELIRKGQLVAFPTETVYGLGANALDAQACAEIF 55
Query: 65 EIKGRKHTSPLAICVGDVSDINRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSL 123
++KGR +PL + V + + L + PGP+T+VL + + + +++
Sbjct: 56 KVKGRPQDNPLIVHVSNFEMVKSLVTGWGELAERCARAFWPGPLTLVLPK--TPIIPETV 113
Query: 124 NPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVS-VKDFENLWERCACVYD 182
+ GL S+G+R+P+ + +A SANL+G+PS + + +++L R + D
Sbjct: 114 SAGLNSVGIRMPNHPVALALIEKAGVPIAAPSANLSGKPSPTNGIHVWKDLQGRIPLILD 173
Query: 183 GGVLPSGRAGSTVVDLTRLGKFK-ILRPGSAKEETI 217
GG G STV+DLT G+ ILRPG E +
Sbjct: 174 GGACDVG-VESTVLDLT--GEIPCILRPGGITRERL 206
>gi|15616333|ref|NP_244638.1| hypothetical protein BH3771 [Bacillus halodurans C-125]
gi|10176395|dbj|BAB07490.1| BH3771 [Bacillus halodurans C-125]
Length = 348
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 111/221 (50%), Gaps = 13/221 (5%)
Query: 1 MAFSLENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAV 60
M++ N + V+N + + + E +EA +K G+++A+PT+T+YG +A S EAV
Sbjct: 1 MSYKQTNHWI-VDNNQHINKNSNEI--KEAALWIKKGELVALPTETVYGLGANALSDEAV 57
Query: 61 NRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESS 117
+I+ KGR +PL + + + R H+P L+++ PGP+T++ +GE
Sbjct: 58 QKIFIAKGRPSDNPLIVHISRKEQLLRL--VSHIPDSANLLINAFWPGPLTIIFPKGEE- 114
Query: 118 NLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWER 176
+ + GL+++ VR+P + + +A SAN +G+PS S +L +
Sbjct: 115 -VSTVVTAGLDTVAVRMPSHPVAQALIEAANVPIAAPSANRSGKPSPTSATHVLADLRGK 173
Query: 177 CACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETI 217
A V DGG G STV+D T + RPG E +
Sbjct: 174 IAGVVDGGPTAEG-VESTVIDCTTTPPI-LYRPGGVTREQL 212
>gi|163814228|ref|ZP_02205619.1| hypothetical protein COPEUT_00381 [Coprococcus eutactus ATCC 27759]
gi|158450473|gb|EDP27468.1| Sua5/YciO/YrdC/YwlC family protein [Coprococcus eutactus ATCC
27759]
Length = 350
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 107/197 (54%), Gaps = 8/197 (4%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E E+A + L++G ++A PT+T+YG DA + +A ++IY KGR +PL + + D
Sbjct: 13 EHMYEQAAEILRSGGLVAFPTETVYGLGGDALNPDASHKIYSAKGRPSDNPLIVHIADTD 72
Query: 84 DINRFA--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
+ A V+D L+++ PGP+T++L++ + + + GL+++ +R+P
Sbjct: 73 SVYELAEYVSDDTKK-LMEAFWPGPLTIILNK--KAVVPHTTTGGLDTVAIRMPSHPVAM 129
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
+ + +A SANL+G+PS + +++ R + DGG + G ST+VD+T
Sbjct: 130 KLIKDSGVYIAAPSANLSGRPSPTTAHHVQQDMDGRIDMIIDGGAVGIGIE-STIVDMTG 188
Query: 201 LGKFKILRPGSAKEETI 217
+ ILRPG E I
Sbjct: 189 -DRPTILRPGYITPEMI 204
>gi|210614126|ref|ZP_03290062.1| hypothetical protein CLONEX_02275 [Clostridium nexile DSM 1787]
gi|210150827|gb|EEA81835.1| hypothetical protein CLONEX_02275 [Clostridium nexile DSM 1787]
Length = 521
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 105/193 (54%), Gaps = 10/193 (5%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA + L+ G ++A PT+T+YG +A + EA + YE KGR +PL + + D+ ++
Sbjct: 34 EAGEILEKGGLVAFPTETVYGLGANALNEEAARKTYEAKGRPSDNPLIVHIADIQALDE- 92
Query: 89 AVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
+ + +P +++ PGP+T++ + S + GL+++ VR+P+ R + R
Sbjct: 93 -IVEFIPEKAKSIVEKFWPGPLTLIFEK--SGVVPLGTTGGLQTVAVRMPEDEIARALIR 149
Query: 146 GLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
++ SAN +G+PS S + E+L + + DGG + G ST+VD+T +
Sbjct: 150 AGGGYVSAPSANTSGRPSPTSAEHVAEDLDGKIDMIIDGGNVEIG-VESTIVDMT-VEPP 207
Query: 205 KILRPGSAKEETI 217
ILRPG+ +E +
Sbjct: 208 MILRPGAITKEML 220
>gi|118619167|ref|YP_907499.1| hypothetical protein MUL_3963 [Mycobacterium ulcerans Agy99]
gi|443492201|ref|YP_007370348.1| putative translation factor [Mycobacterium liflandii 128FXT]
gi|118571277|gb|ABL06028.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
gi|442584698|gb|AGC63841.1| putative translation factor [Mycobacterium liflandii 128FXT]
Length = 216
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 101/192 (52%), Gaps = 10/192 (5%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A ALK G+++ +PTDT+YG DA S AVN + KGR P+ + VG I
Sbjct: 20 AAGALKAGRLVVMPTDTVYGIGADAFDSAAVNALLSAKGRGRDMPVGVLVGSWHTIEGLV 79
Query: 90 VTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ +P G L+ + PG +++V+ + S L+ L ++ +R+P + R
Sbjct: 80 FS--MPAGARELIRAFWPGALSLVVVQAPS--LQWDLGNAHGTVMLRMPLHPVAIELLRQ 135
Query: 147 LESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ +A++SAN++GQP +V V D N + VY G + +A ST+VDLT G +I
Sbjct: 136 V-GPMAVSSANVSGQPPAVDVADARNQFGDLVDVYLDGGPAAQQAASTIVDLT--GAPRI 192
Query: 207 LRPGSAKEETIA 218
LRPG E IA
Sbjct: 193 LRPGPVSAERIA 204
>gi|314935935|ref|ZP_07843285.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus hominis subsp.
hominis C80]
gi|313655941|gb|EFS19683.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus hominis subsp.
hominis C80]
Length = 346
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 107/197 (54%), Gaps = 9/197 (4%)
Query: 35 KTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHL 94
+ G +IA+PT+T+YG +A + +AV IY+ KGR +PL + + S ++ F T +
Sbjct: 29 ENGGLIAIPTETVYGLGANAKNEQAVENIYKAKGRPSDNPLIVHIYKQSQMDAFVST--I 86
Query: 95 P---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESAL 151
P L+++ PGP++ +L + EK + GL SI VR+P R I ++ +
Sbjct: 87 PKEAQKLMNAFWPGPISFILPLKQGYLCEK-VTGGLNSIAVRMPSHPIGRAILEYVDLPI 145
Query: 152 ALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
A SAN++G+PS + + + +L + + +G G STV+D T+ F+I RPG
Sbjct: 146 AAPSANISGRPSPTTFQHVYNDLNGKIDGIVNGDQSEEGLE-STVLDCTQF-PFRIARPG 203
Query: 211 SAKEETIAILEKHSLVE 227
S + + + HS+++
Sbjct: 204 SITQTMLNHVVPHSVIQ 220
>gi|404417806|ref|ZP_10999592.1| translation factor [Staphylococcus arlettae CVD059]
gi|403489818|gb|EJY95377.1| translation factor [Staphylococcus arlettae CVD059]
Length = 347
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 7/189 (3%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA-- 89
Q G +IA+PT+T+YG +A AV +IY+ KGR +PL I + + + F
Sbjct: 26 QIYHQGGLIALPTETVYGLGANALDDNAVKKIYQAKGRPSDNPLIIHIHSLEQLTDFTTD 85
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+TD + + L+ PGP++ +L +S L ++ GL SI VR+P R I + ++
Sbjct: 86 ITDEV-YLLMKHFWPGPISFILPL-KSGYLCSKVSGGLNSIAVRMPSHRIGRQILQLVDL 143
Query: 150 ALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
+A SANL+G+PS +++L R + +G G STV+D T FKI R
Sbjct: 144 PIAAPSANLSGKPSPTQFDHVYQDLNGRIDGIINGDQSEEG-LESTVLDCTSF-PFKIAR 201
Query: 209 PGSAKEETI 217
PGS ++ I
Sbjct: 202 PGSITQKMI 210
>gi|320161912|ref|YP_004175137.1| hypothetical protein ANT_25110 [Anaerolinea thermophila UNI-1]
gi|319995766|dbj|BAJ64537.1| hypothetical protein ANT_25110 [Anaerolinea thermophila UNI-1]
Length = 360
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 107/206 (51%), Gaps = 7/206 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA + L++G ++A PT+T+YG +A AV RI+E KGR PL + + +
Sbjct: 23 EATECLRSGGLVAFPTETVYGLGGNALDGRAVQRIFEAKGRPANDPLIVHLPSADALPMV 82
Query: 89 AVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
T + L + PGP+T++L RG+ N+ S+ GL+++ VRVP + + +
Sbjct: 83 VKTIPTIVSTLAEHFWPGPLTLILPRGD--NVPLSVTAGLDTVAVRVPSHPVAQALLQMS 140
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
A+A SAN G S S + +L R V DGG P G STV+D+T +I
Sbjct: 141 GLAIAAPSANRFGGVSPTSAEHVLRDLEGRIEMVLDGGSTPIG-VESTVLDITA-PIPRI 198
Query: 207 LRPGSAKEETI-AILEKHSLVEEPAA 231
LRPG E + A+L + L+E A+
Sbjct: 199 LRPGGISREALEAVLGRVELLERKAS 224
>gi|304314044|ref|YP_003849191.1| Sua5-related protein [Methanothermobacter marburgensis str.
Marburg]
gi|302587503|gb|ADL57878.1| Sua5-related protein [Methanothermobacter marburgensis str.
Marburg]
Length = 207
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 97/190 (51%), Gaps = 7/190 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EAI ++ G + PTDT+YG +A E+V +++ IKGR P++ICV VS+I R
Sbjct: 17 DEAISVMERGGAVIYPTDTIYGLGVNALDGESVRKLFRIKGRAPDKPVSICVSGVSEIPR 76
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
F+ ++ +LPGP TV+L + + + L G +GVRVPD R I+
Sbjct: 77 FSKPSEHAMEVIRRILPGPYTVLLEKKDL--VPDILTGGSSKVGVRVPDDEVCRRISARF 134
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ TSAN++G+ S + D E + D G S STVVDLT + +L
Sbjct: 135 --PVTATSANISGKQPSANPHDIMGDLE-VDLMLDAGECDSTEP-STVVDLT-VEPPAVL 189
Query: 208 RPGSAKEETI 217
R G E I
Sbjct: 190 RMGRGDPEVI 199
>gi|315649887|ref|ZP_07902969.1| Sua5/YciO/YrdC/YwlC family protein [Paenibacillus vortex V453]
gi|315274686|gb|EFU38068.1| Sua5/YciO/YrdC/YwlC family protein [Paenibacillus vortex V453]
Length = 385
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 6/200 (3%)
Query: 22 ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
A E +EA L G +A PT+T+YG DA ++EAV RI+ KGR +PL + + +
Sbjct: 42 AAEPELQEAGLVLAQGGTVAFPTETVYGLGADAGNTEAVERIFAAKGRPADNPLIVHISE 101
Query: 82 VSDINRFAV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ + + L+DS PGP+++VL + + + GL+++ VR+PD +
Sbjct: 102 LAQLEGLVQHVNETERALMDSFWPGPLSLVLPVKRDA-VSPRVTAGLDTVAVRMPDHSVA 160
Query: 141 RVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRA-GSTVVDL 198
+ LA SAN +G+PS +++ +L V DGG P+G STVV +
Sbjct: 161 LALISAAGRPLAAPSANRSGRPSPTLASHVLADLAGYIDGVLDGG--PAGVGVESTVVQV 218
Query: 199 TRLGKFKILRPGSAKEETIA 218
G +LRPG E +A
Sbjct: 219 GEDGAVTVLRPGGVTAEQLA 238
>gi|417998867|ref|ZP_12639081.1| RNA binding protein [Lactobacillus casei T71499]
gi|410540197|gb|EKQ14715.1| RNA binding protein [Lactobacillus casei T71499]
Length = 333
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 4/201 (1%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ EA ALK G+++A PT+T+YG DA + AV ++Y KGR +PL + V D
Sbjct: 7 ESDISEAAAALKRGELVAFPTETVYGLGADATNVTAVGKVYAAKGRPSDNPLIVTVADAD 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ ++A L L+ + PGP+T++L+ L + GL++ R PD+ R +
Sbjct: 67 MVGQYATITPLAAKLMQAFWPGPLTIILNI-LPGRLSMKVTGGLQTAAFRNPDNALTRKL 125
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ SAN +G+PS + +L + A V D G G S ++DLT +
Sbjct: 126 IATAGVPIVGPSANTSGKPSPTTADHVLHDLDGKIAGVLDDGPTQVG-VESAIIDLT-VT 183
Query: 203 KFKILRPGSAKEETIAILEKH 223
ILRPG+ + + L H
Sbjct: 184 PPAILRPGAIGPDELEPLIGH 204
>gi|18976678|ref|NP_578035.1| sua5 superfamily-like protein [Pyrococcus furiosus DSM 3638]
gi|397650806|ref|YP_006491387.1| sua5 superfamily-like protein [Pyrococcus furiosus COM1]
gi|18892255|gb|AAL80430.1| sua5 superfamily-related protein [Pyrococcus furiosus DSM 3638]
gi|393188397|gb|AFN03095.1| sua5 superfamily-like protein [Pyrococcus furiosus COM1]
Length = 341
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 10/192 (5%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + ++ GK++A PT+T+YG DA + +A RI+E KGR +PL + + + S + +
Sbjct: 19 AARLIREGKLVAFPTETVYGLGADALNEKAARRIFEAKGRPADNPLIVHIAEFSQV--YE 76
Query: 90 VTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ +P L PGP+T+VL R E + GL+++ +R+P + + +
Sbjct: 77 LAREVPEEAKMLAKKFWPGPLTIVLPRREI--VPDVTTGGLDTVAIRMPANEIALKLIKL 134
Query: 147 LESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN++G+PS + + ++ + + C+ DGG G STV+DLT
Sbjct: 135 SGRPIAAPSANISGKPSPTTAEHVADDFYGKIECIIDGGETKIG-VESTVIDLTEWPPV- 192
Query: 206 ILRPGSAKEETI 217
+LRPG E I
Sbjct: 193 LLRPGGLPLEEI 204
>gi|218281197|ref|ZP_03487721.1| hypothetical protein EUBIFOR_00284 [Eubacterium biforme DSM 3989]
gi|218217585|gb|EEC91123.1| hypothetical protein EUBIFOR_00284 [Eubacterium biforme DSM 3989]
Length = 208
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 103/190 (54%), Gaps = 9/190 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ E + A K+IA+PTDT+YG + + + R+ K R T P+ + V +V
Sbjct: 15 TKNQVHEVVCAFNEHKIIALPTDTVYGVGVKYGNLDDLERLKRAKHRPETKPIPMMVSNV 74
Query: 83 SDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ + A+ D + LPG +T+V++ ES ++ + GL +I +R+PD F+
Sbjct: 75 EQMKQVALVDERIEKIAAKFLPGALTLVVNVKES--VDPAYTNGLSTIAIRIPDEKFILD 132
Query: 143 IARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRA--GSTVVDLTR 200
+ L + +TSAN +G+ ++++ D ++E+ + DG VL + +A ST+VD T+
Sbjct: 133 VIDELNCPILVTSANQSGEKTALTSDD---VYEQLPKI-DGIVLGTCKALQASTIVDCTK 188
Query: 201 LGKFKILRPG 210
K ILRPG
Sbjct: 189 -DKLVILRPG 197
>gi|166033062|ref|ZP_02235891.1| hypothetical protein DORFOR_02784 [Dorea formicigenerans ATCC
27755]
gi|166027419|gb|EDR46176.1| Sua5/YciO/YrdC/YwlC family protein [Dorea formicigenerans ATCC
27755]
Length = 353
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 100/189 (52%), Gaps = 6/189 (3%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA-VTD 92
LK G ++A PT+T+YG DA + A +IY KGR +PL + + ++ +++ A +
Sbjct: 29 LKEGGLVAFPTETVYGLGADALNKTASTKIYAAKGRPSDNPLIVHITNMGALDKIADIIP 88
Query: 93 HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
+ + + D+ PGP+T++ + E E + GL+++ VR+P R + +A
Sbjct: 89 EVAYKVADAYWPGPLTMIFQKTEEVPYETT--GGLDTVAVRMPSDEIARALIDAGGGYIA 146
Query: 153 LTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGS 211
SAN +G+PS + E+L + + DGG + G ST++D+T ILRPG+
Sbjct: 147 APSANTSGRPSPTKAEHVEEDLSGKIEMILDGGAVDIG-VESTILDMTVTPPM-ILRPGA 204
Query: 212 AKEETIAIL 220
+E + L
Sbjct: 205 ITKEMLTEL 213
>gi|444916598|ref|ZP_21236711.1| YrdC/Sua5 family protein [Cystobacter fuscus DSM 2262]
gi|444711883|gb|ELW52816.1| YrdC/Sua5 family protein [Cystobacter fuscus DSM 2262]
Length = 313
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 103/192 (53%), Gaps = 10/192 (5%)
Query: 31 IQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAV 90
++ L+ G VIA+PT+T+YG A +A AV R++ IKGR T PL + V + ++ +A
Sbjct: 1 MELLRRGGVIALPTETVYGLAANAEDELAVRRVFAIKGRPATHPLIVHVAEAQALSSWA- 59
Query: 91 TDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
H+P L ++ PGP+T+VL R S ++ G +++ +RVP R + + L
Sbjct: 60 -RHVPEDAWRLAEAFWPGPLTLVLPR--SPRATDAVTGGQDTVALRVPHHPLARAVLQAL 116
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+A SAN G+ S + + +L V DGG G ST+VDL++ G+ +
Sbjct: 117 GGGVAAPSANRFGRVSPTTAEHVRADLGADVDLVLDGGPCTVG-VESTIVDLSQ-GEPAV 174
Query: 207 LRPGSAKEETIA 218
LRPG E I+
Sbjct: 175 LRPGGLAVEEIS 186
>gi|164688897|ref|ZP_02212925.1| hypothetical protein CLOBAR_02545 [Clostridium bartlettii DSM
16795]
gi|164602101|gb|EDQ95566.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium bartlettii DSM
16795]
Length = 346
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI-NRFAV 90
+ L+ G+ + PT+T+YG +A EAV++IY+ KGR +PL + +GD + N
Sbjct: 23 EILRAGETVIFPTETVYGLGANALDEEAVSKIYKAKGRPSDNPLIVHIGDKKQVYNLVQS 82
Query: 91 TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA 150
++D PGP+T++L++ + + K + GL+++ +R+P + + +
Sbjct: 83 VTKEAEIVMDKFWPGPITIILNKKDI--IPKRTSGGLDTVAIRMPSNKIANALIKEANIP 140
Query: 151 LALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF-KILR 208
+A SAN++G+PS K +E + R + + G G STV+DLT G+ ILR
Sbjct: 141 IAAPSANISGRPSPTRAKHVYEEMNHRVSGIIMGNDCVYGLE-STVLDLT--GEIPTILR 197
Query: 209 PGSAKEETI 217
PGS +E +
Sbjct: 198 PGSITKEQL 206
>gi|157694091|ref|YP_001488553.1| hypothetical protein BPUM_3340 [Bacillus pumilus SAFR-032]
gi|157682849|gb|ABV63993.1| hypothetical protein BPUM_3340 [Bacillus pumilus SAFR-032]
Length = 351
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A LK +V+A PT+T+YG +A +EAV +IYE KGR +PL + + +V ++
Sbjct: 24 EQAALLLKQNEVVAFPTETVYGLGANAKETEAVMKIYEAKGRPSDNPLIVHIAEVEQLHE 83
Query: 88 FA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
FA + L+ + PG +T+VL + L K + GL ++GVR+PD + R
Sbjct: 84 FAQIESERAKALMKAFWPGALTIVLP-CKLGTLSKQVTAGLSTVGVRMPDHPIALELIRT 142
Query: 147 LESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTV--VDLTRLGK 203
+A SAN +G+PS +L R A + DGG G + V VD +
Sbjct: 143 AGLPIAAPSANRSGKPSPTQADHVASDLDGRIAGIVDGGSTGIGVESTVVSCVDEIPV-- 200
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 201 --ILRPGGITKEAL 212
>gi|183984067|ref|YP_001852358.1| hypothetical protein MMAR_4096 [Mycobacterium marinum M]
gi|183177393|gb|ACC42503.1| conserved hypothetical protein [Mycobacterium marinum M]
Length = 216
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 101/192 (52%), Gaps = 10/192 (5%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A ALK G+++ +PTDT+YG DA S AVN + KGR P+ + VG I
Sbjct: 20 AAGALKAGRLVVMPTDTVYGIGADAFDSAAVNALLSAKGRGRDMPVGVLVGSWHTIEGLV 79
Query: 90 VTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ +P G L+ + PG +++V+ + S L+ L ++ +R+P + R
Sbjct: 80 FS--MPAGARELIRAFWPGALSLVVVQAPS--LQWDLGNAHGTVMLRMPLHPVAIELLRQ 135
Query: 147 LESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ +A++SAN++GQP +V V D N + VY G + +A ST+VDLT G +I
Sbjct: 136 V-GPMAVSSANVSGQPPAVDVADARNQFGDLVDVYLDGGPAAQQAASTIVDLT--GAPRI 192
Query: 207 LRPGSAKEETIA 218
LRPG E IA
Sbjct: 193 LRPGPVSAERIA 204
>gi|116494653|ref|YP_806387.1| translation factor [Lactobacillus casei ATCC 334]
gi|418001798|ref|ZP_12641929.1| RNA binding protein [Lactobacillus casei UCD174]
gi|116104803|gb|ABJ69945.1| translation factor SUA5 [Lactobacillus casei ATCC 334]
gi|410545611|gb|EKQ19901.1| RNA binding protein [Lactobacillus casei UCD174]
Length = 333
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 4/201 (1%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ EA ALK G+++A PT+T+YG DA + AV ++Y KGR +PL + V D
Sbjct: 7 ESDIPEAAAALKRGELVAFPTETVYGLGADATNVTAVGKVYAAKGRPSDNPLIVTVADAD 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ ++A L L+ + PGP+T++L+ L + GL++ R PD+ R +
Sbjct: 67 MVGQYATITPLAAKLMQAFWPGPLTIILNI-LPGRLSMKVTGGLQTAAFRNPDNALTRKL 125
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ SAN +G+PS + +L + A V D G G S ++DLT +
Sbjct: 126 IATAGVPIVGPSANTSGKPSPTTADHVLHDLDGKIAGVLDDGPTQVG-VESAIIDLT-VT 183
Query: 203 KFKILRPGSAKEETIAILEKH 223
ILRPG+ + + L H
Sbjct: 184 PPAILRPGAIGPDELEPLIGH 204
>gi|375100934|ref|ZP_09747197.1| Sua5/YciO/YrdC/YwlC family protein [Saccharomonospora cyanea
NA-134]
gi|374661666|gb|EHR61544.1| Sua5/YciO/YrdC/YwlC family protein [Saccharomonospora cyanea
NA-134]
Length = 371
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 94/192 (48%), Gaps = 7/192 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDI-N 86
E A L+ G ++A PT+T+YG DA + +AV R++ +KGR T PL + + + +
Sbjct: 17 ERAAGTLRAGGLVAFPTETVYGLGADAENVDAVERVFAVKGRPSTHPLIVHLSGARQLPD 76
Query: 87 RFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A + D PGPVT+VL RG + +++ GLE++ +RVPD R +
Sbjct: 77 WVAEVPDAARRVADRFWPGPVTLVLRRGR--RVPRAVTGGLETVALRVPDHPVARALLTA 134
Query: 147 LESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN G S + + L V DGG G ST+VDLT G
Sbjct: 135 FGGGVAAPSANRFGSVSPTAAAHVGDGLGADVDYVLDGGPCAVG-VESTIVDLT--GAPA 191
Query: 206 ILRPGSAKEETI 217
ILRPG E +
Sbjct: 192 ILRPGGVTREDL 203
>gi|182413416|ref|YP_001818482.1| Sua5/YciO/YrdC/YwlC family protein [Opitutus terrae PB90-1]
gi|177840630|gb|ACB74882.1| Sua5/YciO/YrdC/YwlC family protein [Opitutus terrae PB90-1]
Length = 331
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 91
+ L+ G+++AVPT+T+YG A +A + A +I+ KGR PL + + D + ++ A T
Sbjct: 22 RMLRDGELVAVPTETVYGLAANALDARACRKIFRAKGRPANDPLIVHIHDRAQLDLLAET 81
Query: 92 DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESAL 151
+ L + PGP+T+VL R S + ++ GL S+ VR+P R + R +
Sbjct: 82 NSAAERLARAFWPGPLTMVLPR--RSIVPAVVSSGLPSVAVRMPAHPLFRQLLRRAGMPV 139
Query: 152 ALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
A SAN G S S L R + DGG P G ST+VDL ++LRPG
Sbjct: 140 AAPSANPFGYISPTSAAHVRAGLGRRIPAILDGGECPIG-VESTIVDLRDPRHPQLLRPG 198
Query: 211 SAKEETI 217
+ +
Sbjct: 199 AVSRREL 205
>gi|417986510|ref|ZP_12627078.1| RNA binding protein [Lactobacillus casei 32G]
gi|410525565|gb|EKQ00465.1| RNA binding protein [Lactobacillus casei 32G]
Length = 333
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 4/201 (1%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ EA ALK G+++A PT+T+YG DA + AV ++Y KGR +PL + V D
Sbjct: 7 ESDIPEAAAALKRGELVAFPTETVYGLGADATNVTAVGKVYAAKGRPSDNPLIVTVADAD 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ ++A L L+ + PGP+T++L+ L + GL++ R PD+ R +
Sbjct: 67 MVGQYATITPLAAKLMQAFWPGPLTIILNI-LPGRLSMKVTGGLQTAAFRNPDNALTRKL 125
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ SAN +G+PS + +L + A V D G G S ++DLT +
Sbjct: 126 IATAGVPIVGPSANTSGKPSPTTADHVLHDLDGKIAGVLDDGPTQVG-VESAIIDLT-VT 183
Query: 203 KFKILRPGSAKEETIAILEKH 223
ILRPG+ + + L H
Sbjct: 184 PPAILRPGAIGPDELEPLIGH 204
>gi|383641816|ref|ZP_09954222.1| translation factor SUA5 [Sphingomonas elodea ATCC 31461]
Length = 312
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 92/185 (49%), Gaps = 5/185 (2%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
++ G+ +AVPT+T+YG A DA S+AV IY KGR +PL + V D++ A DH
Sbjct: 25 IRRGESVAVPTETVYGLAADATDSDAVAGIYAAKGRPSFNPLIVHVADMAMAETIARFDH 84
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L PGP+T+VL E S + + GL ++ +R+PD ++ + R LA
Sbjct: 85 EARALAARFWPGPLTMVLPLAEGSPVASLVTAGLPTVALRMPDHRAMQGLIRASGRPLAA 144
Query: 154 TSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSA 212
SAN +G S +L R V D G +G ST+VD +ILRPG
Sbjct: 145 PSANASGGISPTRAAHVAASLAGRIPLVIDDGATSAG-IESTIVDPA---LRRILRPGPV 200
Query: 213 KEETI 217
E +
Sbjct: 201 PAEDL 205
>gi|385806102|ref|YP_005842500.1| Sua5/YciO/YrdC/YwlC family protein [Fervidicoccus fontis Kam940]
gi|383795965|gb|AFH43048.1| Sua5/YciO/YrdC/YwlC family protein [Fervidicoccus fontis Kam940]
Length = 355
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 103/186 (55%), Gaps = 6/186 (3%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAV-TD 92
+K G ++A PT+T+YG +A + A +IY++KGR +P+ + + + + + AV
Sbjct: 24 IKNGGLVAFPTETVYGLGANALNEHATRKIYQVKGRPSDNPIIVHISSIEMLEKIAVNVP 83
Query: 93 HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
+ + L+ L PGP+T++L R S+ + K + GL+++ VR+P + + E +A
Sbjct: 84 EIAYKLIKKLWPGPLTLILKR--SNAVPKLVTGGLDTVAVRMPAHPIAQNLIEQAELPIA 141
Query: 153 LTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGS 211
SAN++G+PS + ++L+ + + DGG + G STV+++ +LRPG+
Sbjct: 142 APSANISGKPSPTRAEHVIKDLYGKIEAIIDGGEVLYG-VESTVINVLSEEPI-LLRPGA 199
Query: 212 AKEETI 217
E I
Sbjct: 200 YSVEII 205
>gi|381210936|ref|ZP_09918007.1| hypothetical protein LGrbi_13504 [Lentibacillus sp. Grbi]
Length = 340
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 103/194 (53%), Gaps = 12/194 (6%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA + L+ G+ +A PT+T+YG DA + AV+ I+ KGR +PL V +
Sbjct: 20 EAAELLRDGRTVAFPTETVYGLGADATNEAAVSGIFRAKGRPEDNPLIAHVATKEQLRSL 79
Query: 89 AVTDHLP---HGLLDSLLPGPVTVVL-SRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
T LP LLD PGP+TVVL S G + ++ GL +IGVR+P+ R +
Sbjct: 80 VST--LPSVAEKLLDQFTPGPLTVVLPSNGVCAG---NVTSGLSTIGVRIPEHPVARELL 134
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ + +A SAN++G+PS + +E+L + + + DGG G STVVD T+
Sbjct: 135 KACDIPVAAPSANISGKPSPTTADHVWEDLNGKISGLVDGGSTGVG-VESTVVDCTQDVP 193
Query: 204 FKILRPGSAKEETI 217
+LRPG +E +
Sbjct: 194 I-VLRPGGITKEQL 206
>gi|320528641|ref|ZP_08029794.1| Sua5/YciO/YrdC/YwlC family protein [Solobacterium moorei F0204]
gi|320131007|gb|EFW23584.1| Sua5/YciO/YrdC/YwlC family protein [Solobacterium moorei F0204]
Length = 199
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 6/177 (3%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
LK VI+VPTDT+YG S +A + +K R T + D++ I A +
Sbjct: 16 LKKDGVISVPTDTVYGVCSQVFSHQAEENLRNVKRRPLTKAFPVMCADLAQIQEIAEVNE 75
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
+++ +PGP+TV+L R + NL + L++I +R+ SN + I +GL + +
Sbjct: 76 RAKKVIEGFMPGPITVILKRKDGVNLSQE---NLDTIAIRMATSNTLAKIIKGLGRPIFM 132
Query: 154 TSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
TSAN +G+P+ S+ + E + +G V S ST+VD T+ + ILRPG
Sbjct: 133 TSANQSGEPTCTSLDEIEKSCPDLDGMVEGDV--SFGEASTIVDCTK-KELAILRPG 186
>gi|253681142|ref|ZP_04861945.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium botulinum D str.
1873]
gi|253562991|gb|EES92437.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium botulinum D str.
1873]
Length = 349
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 107/201 (53%), Gaps = 5/201 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EEA +AL+ G ++A PT+T+YG +A SEAV +I+ KGR +PL + + D + N
Sbjct: 19 EEAGKALREGGLVAFPTETVYGLGANALDSEAVKKIFIAKGRPQDNPLIVHIADFNLDNL 78
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ ++ PGP+T+++ + S+ + + GLES+G+R+P + R + +
Sbjct: 79 VEEIPVIAKKIMKKFWPGPLTIIMKK--SNKIPYVTSAGLESVGIRMPSNVVARELIKKS 136
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+A SAN++G+PS +++ E+L R + G G ST+VD T + +
Sbjct: 137 GVPIAAPSANISGKPSPTNIERCIEDLNGRVEYIIGGEKCDVGLE-STIVDCT-VNPPCV 194
Query: 207 LRPGSAKEETIAILEKHSLVE 227
LRPG E + +E ++
Sbjct: 195 LRPGGITLEMLREIEPEIYID 215
>gi|442318661|ref|YP_007358682.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus stipitatus DSM
14675]
gi|441486303|gb|AGC42998.1| Sua5/YciO/YrdC/YwlC family protein [Myxococcus stipitatus DSM
14675]
Length = 323
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 105/201 (52%), Gaps = 8/201 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A++ L+ G VIA+PT+T+YG A +A AV R++ IKGR T PL + + + ++
Sbjct: 8 ERAVELLRRGGVIALPTETVYGLAANAEDELAVRRVFAIKGRPATHPLIVHLPGMEHLSS 67
Query: 88 FAVTDHLP--HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
+A D P H L + PGP+T+VL R + ++ G +++ +RVP + +
Sbjct: 68 WA-RDIPPAAHALARAFWPGPLTLVLPR--TPRATDAVTGGQDTVALRVPGHPVALAVLK 124
Query: 146 GLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
L LA SAN G+ S + + +L + V DGG G ST+VDL+ G
Sbjct: 125 ALGGGLAAPSANRFGRVSPTTAEHVRVDLGDDVDLVLDGGPCTVG-VESTIVDLSS-GAP 182
Query: 205 KILRPGSAKEETIAILEKHSL 225
ILRPG E I + H++
Sbjct: 183 SILRPGGLSTEDIERVLGHAV 203
>gi|417983236|ref|ZP_12623875.1| RNA binding protein [Lactobacillus casei 21/1]
gi|417992675|ref|ZP_12633028.1| RNA binding protein [Lactobacillus casei CRF28]
gi|417996012|ref|ZP_12636297.1| RNA binding protein [Lactobacillus casei M36]
gi|418012424|ref|ZP_12652140.1| RNA binding protein [Lactobacillus casei Lpc-37]
gi|410528656|gb|EKQ03504.1| RNA binding protein [Lactobacillus casei 21/1]
gi|410532876|gb|EKQ07571.1| RNA binding protein [Lactobacillus casei CRF28]
gi|410536165|gb|EKQ10765.1| RNA binding protein [Lactobacillus casei M36]
gi|410556841|gb|EKQ30700.1| RNA binding protein [Lactobacillus casei Lpc-37]
Length = 333
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 4/201 (1%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E+ EA ALK G+++A PT+T+YG DA + AV ++Y KGR +PL + V D
Sbjct: 7 ESDIPEAAAALKRGELVAFPTETVYGLGADATNVTAVGKVYAAKGRPSDNPLIVTVADAD 66
Query: 84 DINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ ++A L L+ + PGP+T++L+ L + GL++ R PD+ R +
Sbjct: 67 MVGQYATITPLAAKLMQAFWPGPLTIILNI-LPGRLSMKVTGGLQTAAFRNPDNALTRKL 125
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ SAN +G+PS + +L + A V D G G S ++DLT +
Sbjct: 126 IATAGVPIVGPSANTSGKPSPTTADHVLHDLDGKIAGVLDDGPTQVG-VESAIIDLT-VT 183
Query: 203 KFKILRPGSAKEETIAILEKH 223
ILRPG+ + + L H
Sbjct: 184 PPAILRPGAIGPDELEPLIGH 204
>gi|424880280|ref|ZP_18303912.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392516643|gb|EIW41375.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 324
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 87/175 (49%), Gaps = 4/175 (2%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G IA+PT+T+YG A DA + A+ RIYE KGR +PL + D++ A D +
Sbjct: 25 GFAIAIPTETVYGLAADATNPLAITRIYETKGRPRFNPLICHMADLAMAEEHAEFDPVSR 84
Query: 97 GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSA 156
L + PGP+T+VL S + GL+S+G+RVP F + LA SA
Sbjct: 85 ALARAFWPGPLTLVLPLKPESPIHSLATAGLDSVGIRVPQ-GFAGALIGAFGRPLAAPSA 143
Query: 157 NLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
N +G S+ S E +L + + D G PS + + G+ ++LRPG
Sbjct: 144 NTSGGVSATSAAHVEADLGAKIPLILDAG--PSAVGVESTIVKAESGQLRLLRPG 196
>gi|333987983|ref|YP_004520590.1| Sua5/YciO/YrdC/YwlC family protein [Methanobacterium sp. SWAN-1]
gi|333826127|gb|AEG18789.1| Sua5/YciO/YrdC/YwlC family protein [Methanobacterium sp. SWAN-1]
Length = 204
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 92/183 (50%), Gaps = 7/183 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + L+ G ++ PTDT+YG + +AV ++Y K R + P++IC+ + DI A
Sbjct: 19 AKKILRNGGIVVYPTDTVYGIGANIFDEKAVQKVYFAKKRSRSKPISICLSRIEDIKEVA 78
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
D + +LPGP T++L + E + L G + IGVR+PDS + ++
Sbjct: 79 CIDRDTERIARKILPGPFTLILKKKE--GVSPLLTAGEDKIGVRIPDSRICKELSEDF-- 134
Query: 150 ALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
+ TSAN++G S + L + + D GV STV+D+T + KILR
Sbjct: 135 PITTTSANISGMKVPESADGVVKQLGDSVDLILDAGVFEHA-VPSTVIDMT-VFPLKILR 192
Query: 209 PGS 211
GS
Sbjct: 193 KGS 195
>gi|223043990|ref|ZP_03614031.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus capitis SK14]
gi|417906622|ref|ZP_12550403.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus capitis VCU116]
gi|222442705|gb|EEE48809.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus capitis SK14]
gi|341597624|gb|EGS40170.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus capitis VCU116]
Length = 347
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 5/185 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
E + L G ++A+PT+T+YG +A + AV +IYE KGR +PL + + + F
Sbjct: 23 EIKETLLNGGLVAIPTETVYGLGANARNEHAVRKIYEAKGRPSDNPLIVHIHQREQLEEF 82
Query: 89 AV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
D L+D+ PGP++ +L EK + GL SI VR+P R + + +
Sbjct: 83 VDGIDERVSKLMDAFWPGPISFILPLKTGYLCEK-VTGGLNSIAVRMPSHKIGRALLQYI 141
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ +A SANL+G+PS F++L + + +G G STV+D T+ F+I
Sbjct: 142 DEPIAAPSANLSGRPSPTKFDHVFQDLNGKVDGIVNGDQSEEGLE-STVLDCTQY-PFRI 199
Query: 207 LRPGS 211
RPGS
Sbjct: 200 ARPGS 204
>gi|427712975|ref|YP_007061599.1| translation factor SUA5 [Synechococcus sp. PCC 6312]
gi|427377104|gb|AFY61056.1| translation factor SUA5 [Synechococcus sp. PCC 6312]
Length = 218
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 93/175 (53%), Gaps = 10/175 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+ +Q+L+TG V+ PTDT+Y CD A+ R+ ++K + PL +SDI+R
Sbjct: 18 EQLVQSLQTGAVLLYPTDTVYAIGCDLNHKGAIQRVRQLKQLSNDKPLTFLCPSLSDISR 77
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSL-NPGLESIGVRVPDSNFVRVIARG 146
+A + L+ L+PGP T +L G + + K + NP ++ G+RVPDS + +
Sbjct: 78 YAYVSDPAYKLMRRLIPGPYTFLL--GATKLVPKLVQNPKRKTTGIRVPDSAICQALLTA 135
Query: 147 LESALALTSANLTGQPSSVSVKDFENLWER----CACVYDGGVLPSGRAGSTVVD 197
L + + TSA L P +D L++R + D ++P GRA ST++D
Sbjct: 136 LGNPIISTSAPLP--PDQDHYRDTAELFDRFDRLVDVIIDAEIVP-GRAVSTIID 187
>gi|222152013|ref|YP_002561173.1| hypothetical protein MCCL_1770 [Macrococcus caseolyticus JCSC5402]
gi|222121142|dbj|BAH18477.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 334
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 11/195 (5%)
Query: 22 ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
+T H +E I K G+ IA+PT+T+YG A DA + EAV I++ KGR +PL + +
Sbjct: 16 STYPHVQEIITGFKAGETIAIPTETVYGLAADATNREAVAAIFKAKGRPQDNPLIVHIHH 75
Query: 82 VSDINRFAVTDH-LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
+S + F H + L+D PGP++ ++ + L +S+ GL ++ VR+P
Sbjct: 76 LSQLEWFTHDIHAAAYKLMDYFWPGPISFIVPVKQGI-LAESVTAGLNTVAVRMPAHKVA 134
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRA----GSTVV 196
+ + LA SAN +G+PS + + E G++ S + STVV
Sbjct: 135 HQLIEMTDLLLAAPSANTSGKPSPTKAEHVIHDMEGKIF----GIVQSEQVEVGIESTVV 190
Query: 197 DLTRLGKFKILRPGS 211
D ++ F+I RPG+
Sbjct: 191 DCSQY-PFRIARPGA 204
>gi|339504281|ref|YP_004691701.1| Sua5/YciO/YrdC/YwlC family protein [Roseobacter litoralis Och 149]
gi|338758274|gb|AEI94738.1| Sua5/YciO/YrdC/YwlC family protein [Roseobacter litoralis Och 149]
Length = 314
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 4/201 (1%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A L+TG ++A PT+T+YG DA + AV I+E KGR +PL + V D + RF
Sbjct: 18 QAADLLRTGALVAFPTETVYGLGADARNGRAVAAIFEAKGRPSFNPLIVHVLDATHARRF 77
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
L + PGP+++VL E L ++ GL ++ +RVP R + R +
Sbjct: 78 CHWSDTAEKLASAFWPGPLSLVLPLTEGHGLSSLVSAGLSTVALRVPAHPTARALLRAFD 137
Query: 149 SALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A SAN +G+ S + + + L R + D G G ST+V L G +L
Sbjct: 138 GPVAAPSANPSGKISPTTAQHVSDGLGMRVGAILDDGPCRVGLE-STIVGLD--GPASLL 194
Query: 208 RPGSAKEETIAILEKHSLVEE 228
RPG E I + L E
Sbjct: 195 RPGGLPAEEIERVLGQKLSRE 215
>gi|315917425|ref|ZP_07913665.1| SUA5 protein [Fusobacterium gonidiaformans ATCC 25563]
gi|313691300|gb|EFS28135.1| SUA5 protein [Fusobacterium gonidiaformans ATCC 25563]
Length = 202
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 9/204 (4%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E +E + +K G +I PTDT+YG S EA+ +Y+ K R +SPL V V
Sbjct: 2 EVKYQEIGEQIKKGALIIYPTDTVYGIGASIQSEEALIHLYQAKSRNFSSPLIALVDSVE 61
Query: 84 DINRFAVTD---HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
I+ A + L L PG +T++L + + K + G ++GVR+P+
Sbjct: 62 RISEIAYVERKKELLEKLSQKFWPGGLTIILPAKDC--VPKIMISGGNTVGVRIPNHEMA 119
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDFENLWERCA-CVYDGGVLPSGRAGSTVVDLT 199
I R L TSAN++G+ + S ++ +R A V DGGV P G A ST++D T
Sbjct: 120 LSIIRAAGGILPTTSANISGEATPSSYQELSEAIKRNADIVIDGGVCPVGEA-STILDFT 178
Query: 200 RLGKFKILRPGS-AKEETIAILEK 222
+ +ILR G+ KEE A++ K
Sbjct: 179 K-DSIQILRLGAITKEEIEAVIGK 201
>gi|297184204|gb|ADI20322.1| putative translation factor (sua5) [uncultured alpha
proteobacterium EB080_L27A02]
Length = 318
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 3/189 (1%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + LK+G ++A PT+T+YG +A +S+AV IY K R + +PL + V ++ +FA
Sbjct: 16 ASEILKSGGLVAFPTETVYGLGANALNSDAVAEIYTAKKRPNFNPLIVHVLNLETAQKFA 75
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
V + L + PGP+TVV +NL K + GL+++ +RVP R +
Sbjct: 76 VFNKDTLLLANKFWPGPLTVVAPIKNKTNLSKLITAGLDTVAIRVPAHPVARKLLETFNG 135
Query: 150 ALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
+A SAN +G SS S ++ L R + +GG G ST++ L+ G+ ILR
Sbjct: 136 PIAAPSANPSGSISSTSAAHVKSGLGGRIQAILNGGKCDVGLE-STII-LSNNGQCNILR 193
Query: 209 PGSAKEETI 217
G E+ I
Sbjct: 194 SGGISEKEI 202
>gi|302872090|ref|YP_003840726.1| Sua5/YciO/YrdC/YwlC family protein [Caldicellulosiruptor
obsidiansis OB47]
gi|302574949|gb|ADL42740.1| Sua5/YciO/YrdC/YwlC family protein [Caldicellulosiruptor
obsidiansis OB47]
Length = 348
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 10/211 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A L+ G ++A PT+T+YG +A +AV++I+ KGR +PL + + +
Sbjct: 17 EKAALILREGGLVAFPTETVYGLGANALLKDAVDKIFWAKGRPQDNPLIVHISSKEMLEM 76
Query: 88 FA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A +TD + L++ PGP+T+VL + + + ++ GL ++GVR+P + + R
Sbjct: 77 CAEITDEKVYVLIERFWPGPLTIVLPK--KNVVADNVTAGLSTVGVRMPANKIALELIRL 134
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN++G+PS K E+L + + DGG G STVVDL+ G+
Sbjct: 135 SGVPVAAPSANVSGKPSPTEAKHVIEDLMNKVDVIIDGGKCSFGLE-STVVDLSG-GEAV 192
Query: 206 ILRPGS----AKEETIAILEKHSLVEEPAAG 232
ILRPG+ A +E + +E V E +G
Sbjct: 193 ILRPGAISYYALKEVLGNIEYSKAVVEGLSG 223
>gi|160903205|ref|YP_001568786.1| Sua5/YciO/YrdC/YwlC family protein [Petrotoga mobilis SJ95]
gi|160360849|gb|ABX32463.1| Sua5/YciO/YrdC/YwlC family protein [Petrotoga mobilis SJ95]
Length = 344
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 107/199 (53%), Gaps = 12/199 (6%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E +EA QA+K K + PT+T+YG + S AV +I+E KGR + +PL + VS
Sbjct: 15 EEKIKEAAQAIKEDKTVVFPTETVYGLGANGLSENAVRKIFEAKGRPYDNPLIL---HVS 71
Query: 84 DINRFAVTDHLPHGLLDS---LLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
++ F ++ + LL+ LLPGP+T VL + E + + G +++ +R+P
Sbjct: 72 NVRSFLEYTYISYALLEKIERLLPGPITFVLKKREV--VPDIVTAGKDTLAIRMPAHPVA 129
Query: 141 RVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLT 199
+ E +A SAN++G+PS ++S +++ + + GG + G ST++DLT
Sbjct: 130 LKLIEYAEVPIAAPSANISGKPSPTMSEHVLKDMLGKVDYIIIGGKVEFG-VESTIIDLT 188
Query: 200 RLGKFK-ILRPGSAKEETI 217
+ GK ILRPG E +
Sbjct: 189 Q-GKIPIILRPGPIPPEKL 206
>gi|327401143|ref|YP_004341982.1| Sua5/YciO/YrdC/YwlC family protein [Archaeoglobus veneficus SNP6]
gi|327316651|gb|AEA47267.1| Sua5/YciO/YrdC/YwlC family protein [Archaeoglobus veneficus SNP6]
Length = 317
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + +K G ++A PT+T+YG DA + AV RI+E K R +PL + V V + R A
Sbjct: 19 AAEIIKKGGLVAFPTETVYGLGGDALNENAVRRIFEAKERPPRNPLIVHVSSVEQVYRIA 78
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ + L+ PGP+ +VL + + + G++ + VR+PD + E+
Sbjct: 79 EVNEVAEKLMGEFFPGPLALVLKKKDV--VPDITTAGMKKVAVRMPDHKVALTLIELSET 136
Query: 150 ALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
+A SAN++G+PS + E+L R + D G + G STV+D+T KILR
Sbjct: 137 PIAAPSANISGRPSPTKAEHVIEDLAGRIDAILDAGEVKIG-IESTVLDVTS-KPAKILR 194
Query: 209 PGSAKEETI 217
G+ E +
Sbjct: 195 LGAITPEML 203
>gi|314934185|ref|ZP_07841546.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus caprae C87]
gi|313653090|gb|EFS16851.1| Sua5/YciO/YrdC/YwlC family protein [Staphylococcus caprae C87]
Length = 347
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 5/185 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
E + L G ++A+PT+T+YG +A + AV +IYE KGR +PL + + + F
Sbjct: 23 EIKETLLNGGLVAIPTETVYGLGANARNEHAVRKIYEAKGRPSDNPLIVHIHQREQLEEF 82
Query: 89 AV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
D L+D+ PGP++ +L EK + GL SI VR+P R + + +
Sbjct: 83 VDGIDERVSKLMDAFWPGPISFILPLKTGYLCEK-VTGGLNSIAVRMPSHKIGRALLQYI 141
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ +A SANL+G+PS F++L + + +G G STV+D T+ F+I
Sbjct: 142 DEPIAAPSANLSGRPSPTKFDHVFQDLNGKVDGIVNGDQSEEGLE-STVLDCTQY-PFRI 199
Query: 207 LRPGS 211
RPGS
Sbjct: 200 ARPGS 204
>gi|291548626|emb|CBL24888.1| Sua5/YciO/YrdC/YwlC family protein [Ruminococcus torques L2-14]
Length = 508
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 10/188 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EEA LK G ++A PT+T+YG DA EA + Y KGR +PL + + D D+ +
Sbjct: 19 EEAGNVLKQGGLVAFPTETVYGLGADALKEEAAKKTYAAKGRPSDNPLIVHIADYEDLKK 78
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
AV ++P L PGP+T++ + ES + GL+++ VR+P +
Sbjct: 79 VAV--NIPPETDALAAHFWPGPLTMIFEKSES--VPYGTTGGLDTVAVRMPSDPIAAALI 134
Query: 145 RGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
R ++ SAN +G+PS + + +L + + DGG + G ST++D+T +
Sbjct: 135 RAAGGFVSAPSANTSGRPSPTTAEHVRVDLEGKIDMILDGGAVDIGLE-STILDMT-VEP 192
Query: 204 FKILRPGS 211
ILRPG+
Sbjct: 193 PMILRPGA 200
>gi|424873971|ref|ZP_18297633.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393169672|gb|EJC69719.1| Sua5/YciO/YrdC/YwlC family protein [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 324
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G IA+PT+T+YG A DA + A+ RIYE KGR +PL + D++ A D +
Sbjct: 25 GFAIAIPTETVYGLAADATNPLAIARIYETKGRPRFNPLICHMADLAMAEEHAEFDPVSR 84
Query: 97 GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSA 156
L + PGP+T+VL S++ GL+S+G+RVP F + LA SA
Sbjct: 85 ALAAAFWPGPLTLVLPLKPQSSIHSLATAGLDSVGIRVP-KGFAGALIGAFGRPLAAPSA 143
Query: 157 NLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
N +G S+ S E +L + + D G PS + + G+ ++LRPG
Sbjct: 144 NTSGGVSATSAAHVEADLGAKIPLILDAG--PSAVGVESTIVKAEGGRLRLLRPG 196
>gi|257386952|ref|YP_003176725.1| Sua5/YciO/YrdC/YwlC family protein [Halomicrobium mukohataei DSM
12286]
gi|257169259|gb|ACV47018.1| Sua5/YciO/YrdC/YwlC family protein [Halomicrobium mukohataei DSM
12286]
Length = 193
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 9/197 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A+ G+++ PT+T+YG A DA +AV R++++KGR + P+++ V V
Sbjct: 5 DRAADAIDDGELVIYPTETVYGLAGDALDPDAVQRVFDVKGRDRSKPVSLAVPSVDAATD 64
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ + + LPGPVTV+ R S + L G + +G+RVPD + +
Sbjct: 65 YTEPSERELAFMRAFLPGPVTVLARRRPS--VPDVLTAGRDRVGIRVPDHELALALLERV 122
Query: 148 ESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+ + TSAN++G+ S+ +V + E++ E A V DGG P STVVD + +I
Sbjct: 123 -APITSTSANVSGEQSARTVDEIGESVREGTAVVLDGGRTPGTE--STVVD---VAADEI 176
Query: 207 LRPGSAKEETIAILEKH 223
+R G+ E L +H
Sbjct: 177 VREGADCEAIREWLAEH 193
>gi|421192732|ref|ZP_15649985.1| translation factor SUA5 [Oenococcus oeni AWRIB553]
gi|399974310|gb|EJO08473.1| translation factor SUA5 [Oenococcus oeni AWRIB553]
Length = 337
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 3/202 (1%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
LV +E EA + +G V+A PT+T+YG DA +AV +++ K R H +PL +
Sbjct: 3 LVLKTSEKAIAEAANIMASGGVVAFPTETVYGIGADATKRDAVEKVFAAKKRPHDNPLIV 62
Query: 78 CVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
V + +RFA D L+++ PG +T++L + L ++ GL + R P +
Sbjct: 63 TVSNAEMASRFAKLDWRAEKLIENFWPGSLTMILPLIDQDILPDNVTAGLLTAAFRNPKN 122
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVV 196
+ R + L + + SANL+ +PS + + ++ R V D G G ST+V
Sbjct: 123 DVTRHLITLLNNPIVGPSANLSTKPSPTTAEHVLHDMDGRIDAVIDDGPTEIG-VESTIV 181
Query: 197 DLTRLGKFKILRPGSAKEETIA 218
DL+ + + ILRPG+ + ++
Sbjct: 182 DLS-VKQATILRPGAVTADQVS 202
>gi|89095606|ref|ZP_01168500.1| sua5/yciO/yrdC/ywlC family protein [Bacillus sp. NRRL B-14911]
gi|89089352|gb|EAR68459.1| sua5/yciO/yrdC/ywlC family protein [Bacillus sp. NRRL B-14911]
Length = 346
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 106/196 (54%), Gaps = 13/196 (6%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A L + +A PT+T+YG +A + EAV +I+E KGR +PL I + D +
Sbjct: 22 KQAAALLAQNETVAFPTETVYGLGGNARNDEAVKKIFEAKGRPSDNPLIIHIADREQLE- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ + +P L+++ PGP+T++ ++ + L ++ GL ++G+R+PD I
Sbjct: 81 -GIVESVPASADKLMEAFWPGPLTIIFNK-KDGQLSETATAGLNTVGIRMPDHPVALAIL 138
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRA-GSTVVDLTRLG 202
R +A SAN +G+PS + E+L R A + DGG P+G STV+D T G
Sbjct: 139 RESGVPVAAPSANRSGRPSPTTAGHVKEDLNGRIAGIVDGG--PTGVGVESTVLDCT--G 194
Query: 203 KFK-ILRPGSAKEETI 217
+ ILRPG +E +
Sbjct: 195 EIPVILRPGGVTKEQL 210
>gi|259046349|ref|ZP_05736750.1| Sua5/YciO/YrdC/YwlC family protein [Granulicatella adiacens ATCC
49175]
gi|259036986|gb|EEW38241.1| Sua5/YciO/YrdC/YwlC family protein [Granulicatella adiacens ATCC
49175]
Length = 336
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 106/199 (53%), Gaps = 8/199 (4%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ + + A +AL+ G++++ PT+T+YG A S EAV +++E KGR +PL + + D+
Sbjct: 7 TKENLDIAAKALQQGEIVSFPTETVYGLGAIATSQEAVLKVFEAKGRPSDNPLIVHISDI 66
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
+ + + +P L + PGP+T++L + + +L+ GL ++ R+P+
Sbjct: 67 QQMT--STVEEVPEIALTLAKAFWPGPLTMIL-KAKPGIYAPALSAGLPTVSFRMPNHPL 123
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDL 198
+ + L SANL+ +PS V+ FE++ R + DGG G STV+DL
Sbjct: 124 TLELITKVGIPLVGPSANLSTKPSPTKVQHVFEDMNGRIRGIVDGGSSTVG-VESTVIDL 182
Query: 199 TRLGKFKILRPGSAKEETI 217
T ILRPG +E I
Sbjct: 183 TNEEGPVILRPGVITKEQI 201
>gi|254488117|ref|ZP_05101322.1| Sua5/YciO/YrdC family protein [Roseobacter sp. GAI101]
gi|214044986|gb|EEB85624.1| Sua5/YciO/YrdC family protein [Roseobacter sp. GAI101]
Length = 357
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 3/191 (1%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A L++G ++A+PT+T+YG A DAC+ AV RIY KGR +PL + + + R
Sbjct: 60 DRAATLLRSGGLVAIPTETVYGLAADACNGAAVARIYAAKGRPSFNPLIVHLAETQQARR 119
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ + L L + PGP+T+VL L + GL S+ +RVP + +
Sbjct: 120 YGLWSDLAEVLATAFWPGPLTLVLPLAPDHGLSSLVTAGLNSVAIRVPALDAAHQVLTAF 179
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+A SAN +G+ S+ + + + L + V D G P G ST++ L + +
Sbjct: 180 GGPVAAPSANPSGRISATTARHVLDGLGGKIDAVLDAGPCPVGLE-STIIGL-HTPRPTL 237
Query: 207 LRPGSAKEETI 217
LR G E I
Sbjct: 238 LRAGGLPVEAI 248
>gi|448354332|ref|ZP_21543091.1| Sua5/YciO/YrdC/YwlC family protein [Natrialba hulunbeirensis JCM
10989]
gi|445638213|gb|ELY91352.1| Sua5/YciO/YrdC/YwlC family protein [Natrialba hulunbeirensis JCM
10989]
Length = 196
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 5/171 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A++ G ++ PT+T+YG DA +AV R++E+KGR + P+++ V V
Sbjct: 7 DRAADAIRDGDLVVYPTETVYGLGADALDPDAVERVFEVKGRDRSKPISLAVPSVPAAFD 66
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ T + + LPGPVTV+ R ES + L G + +G+RVPD +
Sbjct: 67 YVRTTERERRFMATFLPGPVTVLCRRLES--VPDVLTAGEDRVGIRVPDQPTALALCERA 124
Query: 148 ESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVD 197
+ + TSAN++G S + + ++L E A V DGG P STVVD
Sbjct: 125 GTPITATSANVSGTGSVRRLAELDDDLRESVATVLDGGETPGTE--STVVD 173
>gi|410720738|ref|ZP_11360091.1| Sua5/YciO/YrdC/YwlC family protein [Methanobacterium sp. Maddingley
MBC34]
gi|410600449|gb|EKQ54977.1| Sua5/YciO/YrdC/YwlC family protein [Methanobacterium sp. Maddingley
MBC34]
Length = 213
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
+ L+ G + PTDT+YG + +AV +Y++K R P+++C+ + DI + A
Sbjct: 19 VLDVLRDGGTVVYPTDTVYGLGANIFQEKAVLDVYKMKERSLDKPVSVCLSQIDDIEKIA 78
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ ++ +LPGP T++L+ ++ + + G + IGVR+PD+ R I+R E
Sbjct: 79 HVEQSVKTVIRKVLPGPYTIILNSKDT--VSPQITGGTDKIGVRIPDNFICREISR--EF 134
Query: 150 ALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
+ TSAN++G S + ++ + L + + D G G STVVDLT + +ILR
Sbjct: 135 PITTTSANISGHQSPKNAQEARKELDDHPDIIIDSGPCRGG-ISSTVVDLT-VTPPRILR 192
Query: 209 PGSAKEETIAILEK 222
G + + ++EK
Sbjct: 193 EGEGMGKLLQVMEK 206
>gi|317130767|ref|YP_004097049.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cellulosilyticus DSM
2522]
gi|315475715|gb|ADU32318.1| Sua5/YciO/YrdC/YwlC family protein [Bacillus cellulosilyticus DSM
2522]
Length = 350
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 14/200 (7%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A L + +V+A PT+T+YG +A S +A+ RI++ KGR +PL + + + + +
Sbjct: 27 AATQLASNEVVAFPTETVYGLGGNALSDQAIERIFKAKGRPSDNPLIVHISNKKQLQHYV 86
Query: 90 VTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
H+P+ L+D+ PGP+T+VL + L + L ++ VR+PD +
Sbjct: 87 --KHIPNSARKLIDAFWPGPLTIVLEHNKK--LSTRVTAQLSTVAVRMPDHPVALALIEA 142
Query: 147 LESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
LA SAN +G+PS + ++L + + + DGG G STVVD T
Sbjct: 143 ANVPLAAPSANTSGKPSPTTADHVRKDLAGKISTIIDGGTTGVG-VESTVVDCTS-ETVM 200
Query: 206 ILRPG----SAKEETIAILE 221
+LRPG A EE + ++E
Sbjct: 201 LLRPGGISKEALEEIVGVVE 220
>gi|407776160|ref|ZP_11123449.1| translation factor SUA5 [Thalassospira profundimaris WP0211]
gi|407280876|gb|EKF06443.1| translation factor SUA5 [Thalassospira profundimaris WP0211]
Length = 331
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 101/203 (49%), Gaps = 3/203 (1%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+RP +E +A L+ G+++A PT+T+YG DA +++AV IY K R +PL
Sbjct: 7 IRPYSEGALSQAAAKLRAGELVAFPTETVYGLGADATNADAVAGIYAAKKRPSFNPLISH 66
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
D + AV D L + PG +T+VL R S++ + GL SI VRVP
Sbjct: 67 FPDRDAAAKHAVFDARADKLAAAFWPGALTLVLPRQADSDVCDLVTAGLPSIAVRVPAHP 126
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVD 197
R + R + +A SAN +G+ S + ++L + DGG G STV+D
Sbjct: 127 MARELLRAVGRPVAAPSANRSGKISPTTAAHVAQSLGNAIGMILDGGPCGVGLE-STVID 185
Query: 198 LTRLGKFKILRPGSAKEETIAIL 220
LT + +LRPG + ++ L
Sbjct: 186 LT-TDRVVMLRPGGVTADQVSEL 207
>gi|399054354|ref|ZP_10742885.1| Sua5/YciO/YrdC/YwlC family protein [Brevibacillus sp. CF112]
gi|398047857|gb|EJL40359.1| Sua5/YciO/YrdC/YwlC family protein [Brevibacillus sp. CF112]
Length = 359
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A + L+ G+ +A PT+T+YG +A S AV +I+ KGR +PL + VG+ ++
Sbjct: 27 DAARLLRAGEAVAFPTETVYGLGANALSDAAVEKIFAAKGRPSDNPLIVHVGEREQLSTV 86
Query: 89 AVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
A T +P L+D+ PGP+T++L + + + + GL+S+GVR+PD + +
Sbjct: 87 AGT--VPEKGQKLMDAFWPGPLTIILPKND--QVASLVTAGLDSVGVRMPDHPIALALIK 142
Query: 146 GLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+A SAN +G+PS + + F +L R A + DGG +G + V +
Sbjct: 143 EAGVPIAAPSANRSGRPSPTTAAHVFADLDGRVAGIVDGGA--TGVGVESTVVDVTVDPP 200
Query: 205 KILRPGSAKEETI 217
ILRPG E +
Sbjct: 201 VILRPGGITREQM 213
>gi|85858566|ref|YP_460768.1| sua5/yciO/yrdC/ywlC family protein [Syntrophus aciditrophicus SB]
gi|85721657|gb|ABC76600.1| sua5/yciO/yrdC/ywlC family protein [Syntrophus aciditrophicus SB]
Length = 217
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
PA H E L+ G+V+A PT+T YG DA + A+ +I+ IKGR+ +P+ + +G
Sbjct: 16 PALLQHVAEN---LRKGRVVAYPTETFYGLGADAGNERAIEKIFSIKGRQFNNPIPLIIG 72
Query: 81 DVSDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
D +++ +P L+ PGP+T+V ++ + + N GL IG+R+
Sbjct: 73 DRDELDSLVTA--IPEAAQRLIHVFWPGPLTLVFRASKNVSPRLTANTGL--IGIRISSH 128
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVV 196
R +AR L + L TSAN +GQ S + + L + DGG G GSTVV
Sbjct: 129 PIARSLARSLGAPLTATSANFSGQKESTTAHEVARTLGSLIDGIVDGGQT-RGNKGSTVV 187
Query: 197 DL 198
++
Sbjct: 188 NI 189
>gi|14590350|ref|NP_142416.1| hypothetical protein PH0435 [Pyrococcus horikoshii OT3]
gi|3256838|dbj|BAA29521.1| 340aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 340
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 10/192 (5%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + ++ GK++A PT+T+YG DA + AV RI+E KGR +PL + + S + +
Sbjct: 19 AAKLIREGKLVAFPTETVYGLGADALNERAVRRIFEAKGRPADNPLILHIAKFSQV--YE 76
Query: 90 VTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
+ +P L++ PGP+T+VL R + + GL+++ +R+P + +
Sbjct: 77 LAREVPEEAKVLVERFWPGPLTIVLPRKDV--VPDVTTGGLDTVAIRMPANEIALKLIEL 134
Query: 147 LESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN++G+PS S + ++ + + C+ DGG G STV+DLT
Sbjct: 135 SGKPIAAPSANISGKPSPTSAEHVADDFYGKIECIIDGGETRIG-VESTVIDLTEHPPV- 192
Query: 206 ILRPGSAKEETI 217
+LRPG E I
Sbjct: 193 LLRPGGLPLEEI 204
>gi|228994044|ref|ZP_04153945.1| hypothetical protein bpmyx0001_47670 [Bacillus pseudomycoides DSM
12442]
gi|228765692|gb|EEM14345.1| hypothetical protein bpmyx0001_47670 [Bacillus pseudomycoides DSM
12442]
Length = 347
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A + L+ + IA PT+T+YG +A + EA+ +I+E KGR +PL + +G S +
Sbjct: 22 QKAAKLLRENEAIAFPTETVYGLGANAMNDEAIAKIFEAKGRPSDNPLIVHIGSKSQLK- 80
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L+ PGP+T++L + E + + + GL+++GVR+PD +
Sbjct: 81 -GIVRGIPEVAEVLMKHFWPGPLTIILPKKEG--ISEKVTAGLDTVGVRMPDHPVALALI 137
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS +++ +E+L + A + DGG G STV+D T
Sbjct: 138 EEANVPVAAPSANRSGRPSPTLASHVYEDLNGKIAGIVDGGATGVG-VESTVIDCTSEVP 196
Query: 204 FKILRPGSAKEETI 217
ILRPG +E +
Sbjct: 197 -TILRPGGITKEQL 209
>gi|116491553|ref|YP_811097.1| translation factor SUA5 [Oenococcus oeni PSU-1]
gi|290891158|ref|ZP_06554220.1| hypothetical protein AWRIB429_1610 [Oenococcus oeni AWRIB429]
gi|419758331|ref|ZP_14284648.1| translation factor SUA5 [Oenococcus oeni AWRIB304]
gi|419856538|ref|ZP_14379259.1| translation factor SUA5 [Oenococcus oeni AWRIB202]
gi|421184723|ref|ZP_15642139.1| translation factor SUA5 [Oenococcus oeni AWRIB318]
gi|421188252|ref|ZP_15645591.1| translation factor SUA5 [Oenococcus oeni AWRIB419]
gi|421189171|ref|ZP_15646490.1| translation factor SUA5 [Oenococcus oeni AWRIB422]
gi|421191870|ref|ZP_15649140.1| translation factor SUA5 [Oenococcus oeni AWRIB548]
gi|421195045|ref|ZP_15652257.1| translation factor SUA5 [Oenococcus oeni AWRIB568]
gi|421196914|ref|ZP_15654095.1| translation factor SUA5 [Oenococcus oeni AWRIB576]
gi|116092278|gb|ABJ57432.1| translation factor SUA5 [Oenococcus oeni PSU-1]
gi|290479122|gb|EFD87784.1| hypothetical protein AWRIB429_1610 [Oenococcus oeni AWRIB429]
gi|399904953|gb|EJN92404.1| translation factor SUA5 [Oenococcus oeni AWRIB304]
gi|399965809|gb|EJO00375.1| translation factor SUA5 [Oenococcus oeni AWRIB419]
gi|399966325|gb|EJO00874.1| translation factor SUA5 [Oenococcus oeni AWRIB318]
gi|399970691|gb|EJO04982.1| translation factor SUA5 [Oenococcus oeni AWRIB548]
gi|399973928|gb|EJO08092.1| translation factor SUA5 [Oenococcus oeni AWRIB422]
gi|399976233|gb|EJO10259.1| translation factor SUA5 [Oenococcus oeni AWRIB576]
gi|399976829|gb|EJO10842.1| translation factor SUA5 [Oenococcus oeni AWRIB568]
gi|410499583|gb|EKP91014.1| translation factor SUA5 [Oenococcus oeni AWRIB202]
Length = 337
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 103/202 (50%), Gaps = 3/202 (1%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
LV +E EA + +G V+A PT+T+YG DA +AV +++ K R H +PL +
Sbjct: 3 LVLKTSEKAIAEAANIMASGGVVAFPTETVYGIGADATKRDAVEKVFAAKKRPHDNPLIV 62
Query: 78 CVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
V + +RFA D L+++ PG +T++L + L ++ GL + R P +
Sbjct: 63 TVSNAEMASRFAKLDWRAEKLIENFWPGSLTMILPLIDQDILPDNVTAGLLTAAFRNPKN 122
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVV 196
+ R + L + + SANL+ +PS + + ++ R V D G G ST+V
Sbjct: 123 DVTRHLITLLNNPIVGPSANLSTKPSPTTAEHVLHDMDGRIDAVIDDGPTEIG-VESTIV 181
Query: 197 DLTRLGKFKILRPGSAKEETIA 218
DL+ + + ILRPG+ + ++
Sbjct: 182 DLS-VKQATILRPGAVTADQVS 202
>gi|430810495|ref|ZP_19437607.1| putative translation factor (SUA5) [Cupriavidus sp. HMR-1]
gi|429497034|gb|EKZ95583.1| putative translation factor (SUA5) [Cupriavidus sp. HMR-1]
Length = 326
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 110/204 (53%), Gaps = 13/204 (6%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A EEA++ L+ G+++A PT+T+YG DA + EAV RI+ KGR P+ + V D
Sbjct: 3 TAAELEEAVRLLEAGELVAFPTETVYGLGADAENPEAVARIFAAKGRPSNHPVIVHVVDG 62
Query: 83 SDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
+D+ + +D +P L+D+ PGP+T++L R ++++ ++ G +SIG+R P
Sbjct: 63 ADVGYW--SDDVPDAAQKLIDAFWPGPLTIILKR--AAHIPAAVAGGQDSIGLRCPSHPV 118
Query: 140 VRVIA---RGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVV 196
+ + R +A SAN GQ S + + + + V +G + G S++V
Sbjct: 119 AQALLSRFRRGRGGIAAPSANKFGQVSPTTAEHVRDEFGGSVYVLEGDGVDVG-IESSIV 177
Query: 197 DLTRLGKFK--ILRPGSAKEETIA 218
DL+RL +LRPG+ +A
Sbjct: 178 DLSRLDTAGPVLLRPGAITAAMMA 201
>gi|91785085|ref|YP_560291.1| translation factor SUA5 [Burkholderia xenovorans LB400]
gi|91689039|gb|ABE32239.1| translation factor SUA5 [Burkholderia xenovorans LB400]
Length = 346
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
P + A E A L G+++A PT+T+YG DA + +AV RIY KGR P+ + +
Sbjct: 13 PVSAAQIEHAAALLDAGELVAFPTETVYGLGGDAENPDAVARIYAAKGRPANHPVIVHLA 72
Query: 81 DVSDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
D N + +HLP L+D+ PGP+T++L R ++ + +++ G +S+G+R P
Sbjct: 73 PQGDPNYW--VEHLPADAQRLIDAFWPGPLTLILKR--AARIPAAVSGGQDSVGLRCPSH 128
Query: 138 NFVRVI------ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRA 191
+ + R +A SAN G S + + + + V DGG G
Sbjct: 129 PVAQALLEAFSALRSGHGGVAAPSANRFGHVSPTTAQHVRDEFGDTIHVLDGGASDVG-I 187
Query: 192 GSTVVDLTRLGKFKILRPGSAKEETIA 218
ST++DL+R G +LRPG + IA
Sbjct: 188 ESTILDLSR-GFPALLRPGRVTPQDIA 213
>gi|302380242|ref|ZP_07268714.1| Sua5/YciO/YrdC/YwlC family protein [Finegoldia magna
ACS-171-V-Col3]
gi|302312025|gb|EFK94034.1| Sua5/YciO/YrdC/YwlC family protein [Finegoldia magna
ACS-171-V-Col3]
Length = 342
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 103/194 (53%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD---VSD 84
E+A + +K G V+A PT+T+YG + EA +I+++K RK +PL + V + V +
Sbjct: 18 EKAAELIKNGSVVAFPTETVYGLGANGLDEEACKKIFDVKRRKRDNPLILHVTNEDMVKN 77
Query: 85 INRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
++ D L+D+L PGP+T++ + + N ++ G +++ +R P R +
Sbjct: 78 LSSEITEDQ--KKLMDNLWPGPLTIIFKKSDKVN--DVVSCGGDTVAIRNPSDEIARFLI 133
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS + +D + ++ + + DGG G STVVDLT
Sbjct: 134 DKSGCPIAAPSANKSGRPSPTNAQDVYSDMQDEIEMILDGGSCNIG-IESTVVDLTE-KP 191
Query: 204 FKILRPGSAKEETI 217
+ ILRPG +E +
Sbjct: 192 YTILRPGFYIKEDL 205
>gi|149185276|ref|ZP_01863593.1| putative translation factor [Erythrobacter sp. SD-21]
gi|148831387|gb|EDL49821.1| putative translation factor [Erythrobacter sp. SD-21]
Length = 312
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 107/211 (50%), Gaps = 15/211 (7%)
Query: 14 NKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTS 73
+K G+ R A + L+ G ++AVPT+T+YG A A AV+ IYE KGR +
Sbjct: 13 DKGGMAR---------AAEILRAGGLVAVPTETVYGLAARADDMAAVSLIYEAKGRPSFN 63
Query: 74 PLAICVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVR 133
PL + V + A L ++ PGP+T+VL + L ++ GLE++ VR
Sbjct: 64 PLIVHVASMKVARNLAEFSPEAEALAEAHWPGPLTLVLPSRTDAKLADTVTAGLETVAVR 123
Query: 134 VPDSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAG 192
+P+ +R I + ++ LA SAN +G S + + +L R V DGG RAG
Sbjct: 124 MPNHPIMRKILQSVDVPLAAPSANRSGFISPTTAEHVLTSLDGRIDAVLDGG---ECRAG 180
Query: 193 --STVVDLTRLGKFKILRPGSAKEETIAILE 221
ST+ + G+ ++LRPG + + A+ +
Sbjct: 181 VESTIAAVRADGRVEVLRPGPVQLDAGAMAQ 211
>gi|167747415|ref|ZP_02419542.1| hypothetical protein ANACAC_02135 [Anaerostipes caccae DSM 14662]
gi|167652777|gb|EDR96906.1| Sua5/YciO/YrdC/YwlC family protein [Anaerostipes caccae DSM 14662]
Length = 351
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 100/192 (52%), Gaps = 8/192 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA L+ GK++A PT+T+YG EA +RIYE KGR +PL + +G + I+
Sbjct: 22 EAAGLLREGKLVAFPTETVYGLGGSGWMEEAASRIYEAKGRPSDNPLILHIGSMEMIDEI 81
Query: 89 AVTDHLP-HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A P +D+ PGP+TV+L + S + + GL+S+ VR+P + R
Sbjct: 82 ASCVPGPAKKAMDAFWPGPLTVILPK--SDKVPYRVTGGLDSVAVRMPSHPAALALLREA 139
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK- 205
+A SAN +G+PS + E+L + V DGG + G ST+VD T G+
Sbjct: 140 GVPVAAPSANTSGRPSPTKAEHVVEDLDGKIPMVLDGGKVEVG-VESTIVDFT--GEVPV 196
Query: 206 ILRPGSAKEETI 217
ILRPG ++ +
Sbjct: 197 ILRPGKITKDEL 208
>gi|317058942|ref|ZP_07923427.1| SUA5 protein [Fusobacterium sp. 3_1_5R]
gi|313684618|gb|EFS21453.1| SUA5 protein [Fusobacterium sp. 3_1_5R]
Length = 202
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 103/204 (50%), Gaps = 9/204 (4%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E +E + +K G +I PTDT+YG S EA+ +Y+ K R +SPL V V
Sbjct: 2 EVKYQEIGEQIKKGALIIYPTDTVYGIGASIQSEEALIHLYQAKSRNFSSPLIALVDSVE 61
Query: 84 DINRFAVTD---HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
I+ A + L L PG +T++L + + K + G ++GVR+P+
Sbjct: 62 RISEIAYVERKKELLEKLSQKFWPGGLTIILPAKDC--VPKIMISGGNTVGVRIPNHEMA 119
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKDFENLWERCA-CVYDGGVLPSGRAGSTVVDLT 199
I R L TSAN++G+ + S ++ +R A V DGGV P G A ST++D T
Sbjct: 120 LSIIRASGGILPTTSANISGEATPSSYQELSEAIKRNADIVIDGGVCPVGEA-STILDFT 178
Query: 200 RLGKFKILRPGS-AKEETIAILEK 222
+ +ILR G+ KEE A++ K
Sbjct: 179 K-DSIQILRLGAITKEEIEAVIGK 201
>gi|289581382|ref|YP_003479848.1| Sua5/YciO/YrdC/YwlC family protein [Natrialba magadii ATCC 43099]
gi|448283202|ref|ZP_21474480.1| Sua5/YciO/YrdC/YwlC family protein [Natrialba magadii ATCC 43099]
gi|289530935|gb|ADD05286.1| Sua5/YciO/YrdC/YwlC family protein [Natrialba magadii ATCC 43099]
gi|445574670|gb|ELY29165.1| Sua5/YciO/YrdC/YwlC family protein [Natrialba magadii ATCC 43099]
Length = 196
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 5/171 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A+ G ++ PT+T+YG DA +AV R++E+KGR + P+++ V V
Sbjct: 7 DRAADAICDGDLVVYPTETVYGLGADALDPDAVERVFEVKGRDRSKPISLAVPSVPAAFD 66
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ T + + LPGPVTV+ R E N+ L G + +G+RVPD +
Sbjct: 67 YVRTTERERRFMATFLPGPVTVLCQRLE--NVPDVLTAGEDRVGIRVPDQPTALALCERA 124
Query: 148 ESALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVD 197
+ + TSAN++G S +++ ++ L E A V DGG P STVVD
Sbjct: 125 GTPITATSANVSGAGSVRRLEELDDGLRESVAAVLDGGETPGTE--STVVD 173
>gi|261213430|ref|ZP_05927711.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 3 str.
Tulya]
gi|260915037|gb|EEX81898.1| Sua5/YciO/YrdC/YwlC family protein [Brucella abortus bv. 3 str.
Tulya]
Length = 323
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL V ++ R+
Sbjct: 14 RAVEVLRRGGLVAIPTETVYGLAADAANGEGVAGIFAAKGRPQFNPLIAHVDGIAMAGRY 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVIA 144
D + L ++ PGP+T+VL E + E+ ++P GL ++ VR+P VR +
Sbjct: 74 VAFDPVSRRLAEAFWPGPLTIVLPLKERQDTERPIHPLVTAGLSTLAVRMPHGR-VRDVI 132
Query: 145 RGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
L+S A SAN +G+ S S +L R + D G P G + + +
Sbjct: 133 TALDSPAAAPSANTSGRISPTSAAAVAGDLGGRIDLILDAG--PCGVGVESTIVKVDGDQ 190
Query: 204 FKILRPGS-AKEETIAIL 220
+LRPG A EE A L
Sbjct: 191 VHLLRPGGLAAEEIEAFL 208
>gi|254464111|ref|ZP_05077522.1| Sua5/YciO/YrdC family protein [Rhodobacterales bacterium Y4I]
gi|206685019|gb|EDZ45501.1| Sua5/YciO/YrdC family protein [Rhodobacterales bacterium Y4I]
Length = 316
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 101/203 (49%), Gaps = 4/203 (1%)
Query: 22 ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
ATEA A Q L+ GK+++ PT+T+YG DA +AV IYE KGR +PL V
Sbjct: 11 ATEAGIARAAQLLREGKLVSFPTETVYGLGADARQGKAVAAIYEAKGRPSFNPLIAHVHS 70
Query: 82 VSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
R+ + L + PGP+T+VL + + GL+++GVRVP +
Sbjct: 71 AEAAQRYVEWNGTAETLAHAFWPGPLTLVLPLRGGHGISPLVTAGLDTLGVRVPAHPAAQ 130
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTR 200
+ R L+ +A SAN +G+ S + + L R A + D G G ST++ L
Sbjct: 131 ALLRALDGPVAAPSANPSGKISPTTAAHVKAGLDGRIAAILDDGACGVGLE-STIIGLAG 189
Query: 201 LGKFKILRPGS-AKEETIAILEK 222
+ +LRPG A EE A+L +
Sbjct: 190 P-EPVLLRPGGLAAEEIEAVLGR 211
>gi|58584895|ref|YP_198468.1| translation factor, SUA5 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419211|gb|AAW71226.1| Putative translation factor, SUA5 [Wolbachia endosymbiont strain
TRS of Brugia malayi]
Length = 208
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 5/183 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
E I A++ ++ PT+T+Y AC+A A+ +IY++K R PL+I V DV + +
Sbjct: 4 EIINAIQNNLLVCFPTETVYALACNALDDGAIEKIYQVKKRSQDKPLSIFVSDVCSLVKI 63
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A + L++ PGP+T +L ++ L G SIG+R+PD I L+
Sbjct: 64 ARLEEKYIDLINHFSPGPITYILPLKNNNMLPNRFFKG--SIGIRIPDHPIAISILNRLK 121
Query: 149 SALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ TS N++G+ S D +++ + + V +G L SG ST+ DLT + K L
Sbjct: 122 IPIVATSINVSGEKSVCKASDIPQSIKQHLSAVIEGDELVSG-IESTITDLTG-NRIKFL 179
Query: 208 RPG 210
R G
Sbjct: 180 REG 182
>gi|344995781|ref|YP_004798124.1| Sua5/YciO/YrdC/YwlC family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964000|gb|AEM73147.1| Sua5/YciO/YrdC/YwlC family protein [Caldicellulosiruptor
lactoaceticus 6A]
Length = 348
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 103/186 (55%), Gaps = 6/186 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A L+ G ++A PT+T+YG +A +AV++I+ KGR +PL I V +
Sbjct: 17 EKAALILREGGLVAFPTETVYGLGANALLKDAVDKIFWAKGRPQDNPLIIHVSSKDMLEM 76
Query: 88 FA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A +TD + L++ PGP+T+VL + + + +++ GL ++GVR+P + + R
Sbjct: 77 CAEITDERVYMLIERFWPGPLTIVLPKKDV--IPENVTAGLSTVGVRMPANKIALELIRL 134
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN++G+PS K E+L + + DGG G STVVDL+ K
Sbjct: 135 SGIPVAAPSANVSGKPSPTEAKHVIEDLMGKVDVIIDGGKCSFGLE-STVVDLSG-EKAV 192
Query: 206 ILRPGS 211
ILRPG+
Sbjct: 193 ILRPGA 198
>gi|257877103|ref|ZP_05656756.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus casseliflavus
EC20]
gi|257811269|gb|EEV40089.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus casseliflavus
EC20]
Length = 342
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 6/209 (2%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+ EA L G ++A PT+T+YG A AV ++Y++KGR +PL + + +
Sbjct: 8 QTQLNEAAAILAEGGLVAFPTETVYGLGASALLPTAVAQVYQVKGRPSDNPLIVHIAEPE 67
Query: 84 DINRFAVTDH-LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ F H L+++ PGP+T++ S + S L + GL + R+P++
Sbjct: 68 QLEPFVDNKHPFADKLMETFWPGPLTLIFSIKKDS-LPSIVTGGLSTAAFRMPNNTKTLA 126
Query: 143 IARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTR- 200
+ + + L SAN +G+PS S + +L + A + D GV G STV+DL+
Sbjct: 127 LIKQAQQPLVGPSANTSGKPSPTSAAHVQHDLAGKIAGILDDGVTQIG-VESTVLDLSDP 185
Query: 201 LGKFKILRPGS-AKEETIAILEKHSLVEE 228
+ ILRPG+ +KE+ A+L+ LV++
Sbjct: 186 MAPPIILRPGAISKEQLEAVLQTKVLVDQ 214
>gi|260576257|ref|ZP_05844249.1| Sua5/YciO/YrdC/YwlC family protein [Rhodobacter sp. SW2]
gi|259021525|gb|EEW24829.1| Sua5/YciO/YrdC/YwlC family protein [Rhodobacter sp. SW2]
Length = 318
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 22 ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
AT A A L+ G ++A+PT+T+YG A DA V RI+ KGR +PL + + +
Sbjct: 9 ATPAGIARAAAILRGGGLVAMPTETVYGLAGDARLDATVARIFAAKGRPGFNPLIVHLEN 68
Query: 82 VSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
++ AV D L + PGP+T+VL R + L ++ GL S+ +R+P R
Sbjct: 69 LAQARELAVFDARAEALAQAFWPGPLTLVLPRRADAGLSPLVSAGLASVALRLPAHPVAR 128
Query: 142 VIARGLESALALTSANLTGQPS---SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDL 198
+ LA SAN +G+ S S V+D L R + DGG G S++V L
Sbjct: 129 ALLAAFGGPLAAPSANPSGRVSPTTSAHVRD--GLGGRIDAILDGGACEVG-VESSIVGL 185
Query: 199 TRLGKFKILRPGSAKEETI 217
T G +LRPG E +
Sbjct: 186 T--GPATLLRPGGIPLEAL 202
>gi|448357318|ref|ZP_21546022.1| Sua5/YciO/YrdC/YwlC family protein [Natrialba chahannaoensis JCM
10990]
gi|445649337|gb|ELZ02276.1| Sua5/YciO/YrdC/YwlC family protein [Natrialba chahannaoensis JCM
10990]
Length = 194
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 5/171 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A A++ G ++ PT+T+YG DA +AV R++E+KGR + P+++ V V
Sbjct: 5 DRAADAIRDGDLVVYPTETVYGLGADALDPDAVERVFEVKGRDRSKPISLGVPSVPAAFD 64
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ T + + LPGPVTV+ R E N+ L G + +G+RVPD +
Sbjct: 65 YVRTTERERQFMATFLPGPVTVLCRRLE--NVPDVLTAGEDRVGIRVPDQPTALALCERA 122
Query: 148 ESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVD 197
+ + TSAN++G S + D ++L A V DGG P STVVD
Sbjct: 123 GTPITATSANVSGTGSVRRLADLDDDLRASVATVLDGGETPGTE--STVVD 171
>gi|339506046|ref|YP_004716715.1| Sua5/YciO/YrdC/YwlC family protein [Sinorhizobium fredii GR64]
gi|338760153|gb|AEI89578.1| Sua5/YciO/YrdC/YwlC family protein [Sinorhizobium fredii GR64]
Length = 318
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 101/194 (52%), Gaps = 4/194 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A + ++ G+V+A PT+T+YG DA S + RIYE KGR +PL I V DV R
Sbjct: 15 EAAARLMRNGEVVAFPTETVYGLGADASSPAGIERIYEAKGRPRHNPLIIHVSDVEMARR 74
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
A + S PGP+T++L + E + L ++ G++++ +R P S+ + + R +
Sbjct: 75 MAHFNPEAELAAASFWPGPLTLLLPKREDAGLATAVTAGMKNVAIRFPSSSVAQRLIRAV 134
Query: 148 ESALALTSANLTGQPSSVS-VKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+A SAN +G+ +S V+ L R + + + + G ST++ L +G I
Sbjct: 135 GFPVAAPSANRSGKVTSTRFVEVVRQLDGRISGIVEEDICDHGLE-STILSL--VGSPII 191
Query: 207 LRPGSAKEETIAIL 220
LR GS E + L
Sbjct: 192 LRHGSVPREALEAL 205
>gi|265994364|ref|ZP_06106921.1| Sua5/YciO/YrdC/YwlC family protein [Brucella melitensis bv. 3 str.
Ether]
gi|262765477|gb|EEZ11266.1| Sua5/YciO/YrdC/YwlC family protein [Brucella melitensis bv. 3 str.
Ether]
Length = 323
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 102/198 (51%), Gaps = 9/198 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL V ++ R+
Sbjct: 14 RAVEVLRRGGLVAIPTETVYGLAADAANGEGVAGIFAAKGRPQFNPLIAHVDGIAMAGRY 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVIA 144
D + L ++ PGP+T+VL E + E+ ++P GL ++ VR+P VR +
Sbjct: 74 VAFDPVSRRLAEAFWPGPLTIVLPLKERQDTERPIHPLVTAGLSTLAVRMPHGR-VRDVI 132
Query: 145 RGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
L+S++A SAN +G+ S S +L + + D G P G + + +
Sbjct: 133 TALDSSVAAPSANTSGRISPTSAAAVAGDLGGQIDLILDAG--PCGVGVESTIVKVDGDQ 190
Query: 204 FKILRPGS-AKEETIAIL 220
+LRPG A EE A L
Sbjct: 191 VHLLRPGGLAAEEIEAFL 208
>gi|376259651|ref|YP_005146371.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium sp. BNL1100]
gi|373943645|gb|AEY64566.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium sp. BNL1100]
Length = 354
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 105/189 (55%), Gaps = 14/189 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A +ALK G +A PT+T+YG +A AVN+I++ KGR +PL + + D ++
Sbjct: 19 EPAAEALKQGMTVAFPTETVYGLGANALDGVAVNKIFKAKGRPSDNPLIVHIADREKVSE 78
Query: 88 FAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
T +P+ L+D L PGP+T+V+ + SS + + + GL+++ +R+P +
Sbjct: 79 L--TSFIPNKAVALMDKLWPGPLTLVMKK--SSVIPREITAGLDTVAIRMPGHPVALQLI 134
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAG--STVVDLTRL 201
+ +A SAN++G+PS + + ++L + + D G S R G STV+D++ +
Sbjct: 135 KLAGIPVAAPSANVSGKPSPTTAQHVLDDLEGKIEIIIDAG---SSRVGLESTVLDVS-V 190
Query: 202 GKFKILRPG 210
+LRPG
Sbjct: 191 DPPVLLRPG 199
>gi|354806893|ref|ZP_09040372.1| hypothetical protein CRL705_221 [Lactobacillus curvatus CRL 705]
gi|354514684|gb|EHE86652.1| hypothetical protein CRL705_221 [Lactobacillus curvatus CRL 705]
Length = 339
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 9/194 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A LK G++I+ PT+T+YG DA + EAV ++Y KGR +PL + V V+ +
Sbjct: 12 EQAAADLKAGELISFPTETVYGLGADATNPEAVKKVYAAKGRPSDNPLIVHVASVATVEH 71
Query: 88 FA--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
+A V+D L+D+ PG +T++L ++ L+ + GL++ R+P++ + +
Sbjct: 72 YAAGVSDRFKQ-LVDAFWPGSLTIILPLKHAA-LDSVVTGGLKTAAFRMPNNAVTLDLIK 129
Query: 146 GLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGK 203
L SAN +G+PS + +L + A V D G P+G STV+DL+ +
Sbjct: 130 AAGVPLVGPSANTSGKPSPTTADHVLHDLNGKIAGVIDDG--PTGVGLESTVIDLS-VAT 186
Query: 204 FKILRPGSAKEETI 217
ILRPG +E I
Sbjct: 187 PVILRPGVVTQEAI 200
>gi|21227350|ref|NP_633272.1| SUA5 protein [Methanosarcina mazei Go1]
gi|20905707|gb|AAM30944.1| SUA5 protein [Methanosarcina mazei Go1]
Length = 364
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 98/176 (55%), Gaps = 9/176 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + ++ G +A PT+T+YG D + + V +I+E K R +PL++ V DI +
Sbjct: 26 DEAAEIIRKGGTVAFPTETVYGLGADGLNPDTVLKIFEAKERPPGNPLSLLVHSREDIKK 85
Query: 88 FAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
V ++P L+D+ PGP+T+VL + ++ S N L +IG+R+PD +
Sbjct: 86 --VAKNIPEKALLLMDTFWPGPLTIVLEKKDTVPEITSGN--LPTIGLRMPDHRIPLELI 141
Query: 145 RGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLT 199
+ + LA SANL+G+PS S+++ +L R V DGG G STVVDLT
Sbjct: 142 KRAGTPLAAPSANLSGKPSPSLAIHVLADLAGRIDAVIDGGGTAIGLE-STVVDLT 196
>gi|353328740|ref|ZP_08971067.1| Sua5/YciO/YrdC/YwlC family protein [Wolbachia endosymbiont wVitB of
Nasonia vitripennis]
Length = 195
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
E I A+K + PT+T+Y +C+A +E++ +IY IK R PL++ V ++ +
Sbjct: 4 EVINAIKNNLLACFPTETVYALSCNALGNESIEKIYRIKKRSQNKPLSVFVSNIDSLINI 63
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A L++ PGP+T +L ++S L +SIG+R+PD I L+
Sbjct: 64 AKVKEEYIDLINYFSPGPMTYILPLQDNSILPNEF--FKDSIGIRIPDHPIAISILNELK 121
Query: 149 SALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ + TS N++G+ S +D +++ + V + L SG ST++DLT K K+L
Sbjct: 122 TPVVATSINISGEKSICKARDIPQSIKRHLSAVIEDDELVSG-IESTIIDLTG-DKIKVL 179
Query: 208 RPGSAKEETI 217
R G +TI
Sbjct: 180 RKGKISLQTI 189
>gi|436841646|ref|YP_007326024.1| Sua5/YciO/YrdC/YwlC family protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432170552|emb|CCO23923.1| Sua5/YciO/YrdC/YwlC family protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 227
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 110/218 (50%), Gaps = 14/218 (6%)
Query: 5 LENGQVSVENKAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIY 64
+ N V + K+ L+R +EA+ +KTG V+ PT+TL+ DA A NR+
Sbjct: 10 INNRSVRLSTKSELIR----MSEQEAVNIIKTGGVLVYPTETLFAIGADASDERAANRVA 65
Query: 65 EIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLL---DSLLPGPVTVVL-SRGESSNLE 120
IKGR + PL + +G + ++ VTD + +L S PGP+++++ +RGE L
Sbjct: 66 RIKGRPVSKPLPLIIGSMEQLD--LVTDFISSEILKLAKSFWPGPLSILIKARGE---LP 120
Query: 121 KSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDFEN-LWERCAC 179
++ VR D + +AL TSAN++G+ + V+D +N L
Sbjct: 121 SAVKDSRGYTSVRWTDHPLACALCIKSRTALIATSANMSGKQAVAKVEDLDNELTVMAEG 180
Query: 180 VYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETI 217
V+DG P G + STVV+ GK ++LR G +T+
Sbjct: 181 VFDGCPGPKGGSPSTVVEPLCGGKVRVLRDGVISRKTL 218
>gi|441499294|ref|ZP_20981480.1| Sua5 YciO YrdC YwlC family protein [Fulvivirga imtechensis AK7]
gi|441436827|gb|ELR70185.1| Sua5 YciO YrdC YwlC family protein [Fulvivirga imtechensis AK7]
Length = 209
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 94/192 (48%), Gaps = 18/192 (9%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRK-HTSPLAICVGDVSDIN 86
E + L+ G VI PTDT+YG CD + +AV+R+ IKG K L+ D+SDI+
Sbjct: 19 EHIVNVLRDGGVIIYPTDTIYGIGCDLFNKKAVDRVCRIKGIKPKNFNLSFVCYDLSDIS 78
Query: 87 RFAVTDHLP-HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
+ P +L LPGP T +L +SN+ K L+ +++G+R+PD+N R I +
Sbjct: 79 HYVKRIDTPTFKVLKKALPGPFTFILE--SNSNVPKILDTNKKTVGIRIPDNNIPRAIVK 136
Query: 146 GLESALALTS-------ANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDL 198
L + TS T P + FE V DGG G STVVD
Sbjct: 137 TLGHPIVTTSIRNKDEIVEYTTDPEII----FEEFKHVVDIVIDGGF--GGNIPSTVVDC 190
Query: 199 TRLGKFKILRPG 210
T+ +F +LR G
Sbjct: 191 TQ-EQFVVLREG 201
>gi|340757961|ref|ZP_08694553.1| Sua5/YciO/YrdC/YwlC family protein [Fusobacterium varium ATCC
27725]
gi|251836247|gb|EES64784.1| Sua5/YciO/YrdC/YwlC family protein [Fusobacterium varium ATCC
27725]
Length = 216
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 101/191 (52%), Gaps = 10/191 (5%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 91
+ LK G +I PTDT+YG S E++ +IY+ K R SPL + V DVS I + A
Sbjct: 18 KLLKEGNLIIYPTDTVYGVGGIIESDESIAKIYKAKERSFKSPLIVLVSDVSKIEKIAYI 77
Query: 92 DHLPHGLLDSLL----PGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ ++ L+ PG +T++L++ N+ + G +++GVR+P+ + I
Sbjct: 78 EEKNREKIEKLIKEFWPGGLTIILNK--KDNVPDIMVSGGKTVGVRMPNLDTALKIIEAA 135
Query: 148 ESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
L TSAN++G+ + S + E ER + DGG P G A ST++D++ K KI
Sbjct: 136 GGLLPTTSANISGETTPRSYDELSEEFKERVEILVDGGRCPIGNA-STIIDMS--DKPKI 192
Query: 207 LRPGSAKEETI 217
LR G+ E I
Sbjct: 193 LRTGAISIEDI 203
>gi|332653079|ref|ZP_08418824.1| Sua5/YciO/YrdC/YwlC family protein [Ruminococcaceae bacterium D16]
gi|332518225|gb|EGJ47828.1| Sua5/YciO/YrdC/YwlC family protein [Ruminococcaceae bacterium D16]
Length = 341
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 103/197 (52%), Gaps = 6/197 (3%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
TE +EA L+ G ++ +PT+T+YG + + EAV I+E KGR +PL + + D
Sbjct: 7 TEHDIDEAAAILRDGGLLGIPTETVYGLGANGLNEEAVAHIFEAKGRPQDNPLILHIPDA 66
Query: 83 SDINRFAVTDHL-PHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
S + R+ L + L ++ PGP+T++L R + + ++ GL+++G+R P R
Sbjct: 67 SWLERYCKDIPLTAYQLAEAYWPGPMTMILKRKDI--VPDAVTAGLDTVGMRCPAHPLCR 124
Query: 142 VIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
I +A S N +G+PS + + E++ + + DGG G ST++DLT
Sbjct: 125 EIIAASGVPVAAPSGNTSGRPSPTTAQHMLEDMDGKIDAIVDGGSCSVG-VESTIIDLTE 183
Query: 201 LGKFKILRPGSAKEETI 217
++LRPG E +
Sbjct: 184 T-PARLLRPGGITLEQL 199
>gi|302532178|ref|ZP_07284520.1| Sua5/YciO/YrdC/YwlC family protein [Streptomyces sp. C]
gi|302441073|gb|EFL12889.1| Sua5/YciO/YrdC/YwlC family protein [Streptomyces sp. C]
Length = 324
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 97/188 (51%), Gaps = 10/188 (5%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
L+ G ++A+PT+T+YG DA +++AVNRI+E+KGR + PL + +G ++ + V +
Sbjct: 15 LRAGGLVALPTETVYGLGADAENADAVNRIFEVKGRPSSHPLIVHIGGAEQLDDW-VEEV 73
Query: 94 LPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESAL 151
P L + PGP+T+VL RG LE + GLE++ VRVPD + +
Sbjct: 74 SPTARLLAERFWPGPLTLVLRRGRRVPLEAT--GGLETVAVRVPDHPVALELLAAFGGGV 131
Query: 152 ALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF-KILRP 209
SAN G S + L E V DGG G ST+VD+T G ILRP
Sbjct: 132 TAPSANRFGSVSPTTADHVGAELGEAVDLVLDGGPCQVG-VESTIVDVT--GDVPSILRP 188
Query: 210 GSAKEETI 217
G E +
Sbjct: 189 GGVTREDL 196
>gi|154500228|ref|ZP_02038266.1| hypothetical protein BACCAP_03892 [Bacteroides capillosus ATCC
29799]
gi|150270960|gb|EDM98234.1| Sua5/YciO/YrdC/YwlC family protein [Pseudoflavonifractor capillosus
ATCC 29799]
Length = 341
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 10/199 (5%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T +EA + LK G ++ +PT+T+YG EAV I+ KGR +PL + V
Sbjct: 7 TAQDIQEAAEILKRGGLLGIPTETVYGLGASGLDPEAVAHIFAAKGRPQDNPLILHVPSA 66
Query: 83 SDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
+ R+ + +P + L + PGP+T++L R + ++ GL+++G+R PD
Sbjct: 67 DWLERYC--EDIPDAAYALAERFWPGPMTMILRR--KPIVPDAVTAGLDTVGMRCPDHGV 122
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDL 198
R I +A S N +G+PS S D E++ + + DGG G ST++DL
Sbjct: 123 TRAIIAAAGVPVAAPSGNTSGRPSPTSAADMLEDMDGKIDGIVDGGPCTVG-VESTIIDL 181
Query: 199 TRLGKFKILRPGSAKEETI 217
T L ++LRPG E +
Sbjct: 182 T-LTPPRLLRPGGVTLEQL 199
>gi|297620333|ref|YP_003708470.1| Sua5/YciO/YrdC/YwlC family protein [Waddlia chondrophila WSU
86-1044]
gi|297375634|gb|ADI37464.1| Sua5/YciO/YrdC/YwlC family protein [Waddlia chondrophila WSU
86-1044]
gi|337292776|emb|CCB90780.1| putative tRNA threonylcarbamoyladenosine biosynthesis protein YwlC
[Waddlia chondrophila 2032/99]
Length = 307
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 111/199 (55%), Gaps = 13/199 (6%)
Query: 27 AEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDIN 86
+ +AI+ L +G+V+A+PT+T+YG A EA+ +I+ +KGR +PL + VG + ++
Sbjct: 5 SRQAIRMLLSGEVVALPTETVYGLAASLKFPEAIKKIFSLKGRPSDNPLIVHVGKIEQLS 64
Query: 87 RFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ T P G L ++ PG +T+++ + +++ GL ++ VR+P R +
Sbjct: 65 SYVTT--FPPGFESLAEAFWPGALTLIID-ANKEMVPEAVRAGLSTVAVRIPSHAKTRQV 121
Query: 144 ARGLES--ALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
LE AL + SANL+G+PS+ + + + ++ A V DGG G ST++ + R
Sbjct: 122 ---LEETGALVMPSANLSGRPSATTAQHVIDDFQDAAPVLDGGKCQQG-VESTIM-IFRD 176
Query: 202 GKFKILRPGSAKEETIAIL 220
++ I R G+ E IA++
Sbjct: 177 TRWVIAREGAVTAEEIALV 195
>gi|255993957|ref|ZP_05427092.1| Sua5/YciO/YrdC/YwlC family protein [Eubacterium saphenum ATCC
49989]
gi|255993625|gb|EEU03714.1| Sua5/YciO/YrdC/YwlC family protein [Eubacterium saphenum ATCC
49989]
Length = 339
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 111/212 (52%), Gaps = 10/212 (4%)
Query: 15 KAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSP 74
K ++ P E E+A ++TG +A PT+T+YG +A +A+ +IY+ KGR +P
Sbjct: 2 KTKILNPDKEG-MEKAANIIRTGGTVAFPTETVYGLGANALDPDAIEKIYKAKGRPSDNP 60
Query: 75 LAICVGDVSDINRFA--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGV 132
L + + D+S++ A V H+ + + PGP+T+V + S+++ + GL+++ V
Sbjct: 61 LIVHISDISELQGVASDVDKHI-LAIANEFWPGPLTLVCKK--SADIPDQVTGGLDTVAV 117
Query: 133 RVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA 191
R+P S+ R R +A SAN +G+PS S ++L + V G G
Sbjct: 118 RMPSSSIAREFIRSAGVPIAAPSANKSGKPSPTSTSHVIDDLNGKIDAVIMGDDSDIG-I 176
Query: 192 GSTVVDLTRLGKFKILRPGSAKE-ETIAILEK 222
STV+ +T GK +LRPG E E LEK
Sbjct: 177 ESTVISVTG-GKVNVLRPGVIGEVEIRGCLEK 207
>gi|433542752|ref|ZP_20499175.1| hypothetical protein D478_03449 [Brevibacillus agri BAB-2500]
gi|432185943|gb|ELK43421.1| hypothetical protein D478_03449 [Brevibacillus agri BAB-2500]
Length = 359
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 10/193 (5%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A + L+ G+ +A PT+T+YG +A S AV +I+ KGR +PL + +G+ ++
Sbjct: 27 DAARLLRAGEAVAFPTETVYGLGANALSDAAVEKIFAAKGRPSDNPLIVHIGEREQLSTV 86
Query: 89 AVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
A T +P L+D+ PGP+T++L + + + + GL+S+GVR+PD + +
Sbjct: 87 AGT--VPEKGQKLMDAFWPGPLTIILPKND--QVASLVTAGLDSVGVRMPDHPIALALIK 142
Query: 146 GLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+A SAN +G+PS + + F +L R A + DGG +G + V +
Sbjct: 143 EAGVPIAAPSANRSGRPSPTTAAHVFADLDGRVAGIVDGGA--TGVGVESTVVDVTVDPP 200
Query: 205 KILRPGSAKEETI 217
ILRPG E +
Sbjct: 201 VILRPGGITREQM 213
>gi|388579288|gb|EIM19613.1| hypothetical protein WALSEDRAFT_58609 [Wallemia sebi CBS 633.66]
Length = 799
Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 21/224 (9%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T + +A +L GK++A PT+T+YG +A + +AVN I++ KGR + +PL + V
Sbjct: 26 THDNIRKAAISLLEGKIVAFPTETVYGLGANAFNEKAVNSIFKAKGRPNDNPLIVHVSSF 85
Query: 83 SDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
++ + +P L L PGP+T++++ E+ L L ++GVR+P
Sbjct: 86 KMFEKY-FSQPMPSSYDILTKHLWPGPLTILVNSPET--LPGETTAHLTTVGVRMPSHPV 142
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCAC------VYDGGVLPSGRAG 192
R + + LA SAN +G+PS + F++ ++R + DGG G
Sbjct: 143 ARALIEISGTPLAAPSANSSGKPSPTTADHVFDDTFQRNEAREVMDFILDGGSSDIGLES 202
Query: 193 STVVDLTRLGKFKILRPGSAKEETIA--------ILEKHSLVEE 228
+ + ++ GK KILRPG E IA I E++++V +
Sbjct: 203 TVIDGISEPGKIKILRPGGVTVEAIANIVGIENVIYERNTVVSD 246
>gi|331092053|ref|ZP_08340884.1| hypothetical protein HMPREF9477_01527 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402254|gb|EGG81825.1| hypothetical protein HMPREF9477_01527 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 534
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A + ++ G ++A PT+T+YG +A EA + YE KGR +PL I + D+S +N+
Sbjct: 47 EQAGKIIQEGGLVAFPTETVYGLGANALDEEAAKKTYEAKGRPSDNPLIIHIADISHLNK 106
Query: 88 FAVTDHLPHGLLD---SLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ ++ +D PGP+T++ + S + GL+++ VR+PD R +
Sbjct: 107 --IVQNISKKAMDLAEVFWPGPLTMIFEK--SDIVPYGTTGGLDTVAVRMPDDIIARELI 162
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
++ SAN +G+PS + K E++ R + DGG + G ST+VD+T
Sbjct: 163 LEGGGYISAPSANTSGRPSPTTAKHVEEDMSGRIDMILDGGSVDIG-VESTIVDMTAEPP 221
Query: 204 FKILRPGSAKEETI 217
ILRPG+ + +
Sbjct: 222 M-ILRPGAVTQRML 234
>gi|335996954|ref|ZP_08562871.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus ruminis SPM0211]
gi|335352024|gb|EGM53515.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus ruminis SPM0211]
Length = 339
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 15/213 (7%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T E+A L+ G++IA PT+T+YG DA + +AV R+Y KGR +PL + V
Sbjct: 8 TTDEIEKAANELRLGELIAFPTETVYGLGADATNEQAVKRVYLAKGRPSDNPLIVTVSSR 67
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
+ + + LP L+D+ PGP+T++L E + L K++ GLE+ R+P +
Sbjct: 68 KMVEEY--VESLPERAVKLMDAFWPGPLTMILKIKEGA-LSKAVTGGLETAAFRMPQN-- 122
Query: 140 VRVIARGLESA---LALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTV 195
+ + +ESA + SAN +G+PS + + + +L R A + D G G ST+
Sbjct: 123 -KATLKLIESAGVPIVGPSANSSGKPSPTTAQHVYHDLEGRIAGILDDGPTQVG-VESTI 180
Query: 196 VDLTRLGKFKILRPGSAKEETIAILEKHSLVEE 228
+DL+ ILRPG+ E + + K +++ +
Sbjct: 181 IDLSSEHPV-ILRPGAVTVEQLEEVLKETVLSD 212
>gi|338973357|ref|ZP_08628721.1| YrdC/Sua5 family protein [Bradyrhizobiaceae bacterium SG-6C]
gi|338233400|gb|EGP08526.1| YrdC/Sua5 family protein [Bradyrhizobiaceae bacterium SG-6C]
Length = 360
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 10/190 (5%)
Query: 32 QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT 91
+ L+ G ++A PT+T+YG DA ++ AV ++YE KGR +PL V D+ + A
Sbjct: 53 RCLEDGGLVAFPTETVYGLGADATNARAVAQLYEAKGRPAFNPLIAHVSDLQAARKIARF 112
Query: 92 DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESAL 151
D L ++ PGP+T+VL + + GLE+I VRVP R I R +
Sbjct: 113 DETSLRLAEAFWPGPLTLVLPKATGCPVSDLATAGLETIAVRVPAHPVARDILRAFGKPV 172
Query: 152 ALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK---IL 207
SAN++G S + + +L R + DGG + G V+ T +G F+ +L
Sbjct: 173 VAPSANISGHVSPTTAEHVLGDLAGRIDLIVDGGPVSVG------VESTIVGCFETPLLL 226
Query: 208 RPGSAKEETI 217
RPG E I
Sbjct: 227 RPGGLPREDI 236
>gi|312897941|ref|ZP_07757354.1| Sua5/YciO/YrdC/YwlC family protein [Megasphaera micronuciformis
F0359]
gi|310620975|gb|EFQ04522.1| Sua5/YciO/YrdC/YwlC family protein [Megasphaera micronuciformis
F0359]
Length = 350
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 10/195 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EEA + ++ G+++ PT+T+YG + + A IY KGR +PL + V D + +
Sbjct: 20 EEAGRLIRQGELVIFPTETVYGIGANGLDAAACRAIYTAKGRPSDNPLILTVPDKAGVE- 78
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
AV +LP L++ PGP+T+VL R ++ + + GL+++ +R PD R
Sbjct: 79 -AVVSYLPPLAETLIEKFWPGPLTLVLPRKDT--VPDAATGGLDTVALRCPDHAGCREFL 135
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ +A SANL+G+PS + + F ++ R A + DGG G ST+V++
Sbjct: 136 KAAGVPVAGPSANLSGRPSPTTASEAFHDMEGRVAMILDGGSCTVG-VESTIVEVLD-NV 193
Query: 204 FKILRPGSAKEETIA 218
+LRPG+ EE +A
Sbjct: 194 VTVLRPGAVTEEMLA 208
>gi|300766723|ref|ZP_07076640.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308181158|ref|YP_003925286.1| SUA5 family translation factor [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|380033085|ref|YP_004890076.1| translation factor, SUA5 family [Lactobacillus plantarum WCFS1]
gi|418275884|ref|ZP_12891207.1| translation factor, SUA5 family [Lactobacillus plantarum subsp.
plantarum NC8]
gi|300495823|gb|EFK30974.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308046649|gb|ADN99192.1| SUA5 family translation factor [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|342242328|emb|CCC79562.1| translation factor, SUA5 family [Lactobacillus plantarum WCFS1]
gi|376009435|gb|EHS82764.1| translation factor, SUA5 family [Lactobacillus plantarum subsp.
plantarum NC8]
Length = 339
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A A L G+++A PT+T+YG DA + +AV ++Y KGR +PL + V DV
Sbjct: 7 TPAEIPAAAALLTAGQLVAFPTETVYGLGADATNVDAVKQVYLAKGRPSDNPLIVHVADV 66
Query: 83 SDINRFAVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
+ RFA L+ + PGP+T++ + + L + GL++ R PD+
Sbjct: 67 ETVERFAQPLSEAAKKLIKAFWPGPLTMIF-KLKPDALAPEVTGGLQTAAFRNPDNEATL 125
Query: 142 VIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
+ R + + SAN +G+PS + + +L + A + D G G STV+DL+
Sbjct: 126 ALIRAAGTPIVGPSANTSGKPSPTTAQHVLHDLRGKIAGILDDGPTKVG-VESTVLDLST 184
Query: 201 LGKFKILRPGSAKEETI 217
K ILRPG+ E I
Sbjct: 185 -DKPAILRPGAVTPEAI 200
>gi|306842310|ref|ZP_07474970.1| Sua5/YciO/YrdC/YwlC family protein [Brucella sp. BO2]
gi|306287567|gb|EFM59023.1| Sua5/YciO/YrdC/YwlC family protein [Brucella sp. BO2]
Length = 323
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL V ++ R+
Sbjct: 14 RAVEVLRRGGLVAIPTETVYGLAADAANGEGVAGIFAAKGRPQFNPLIAHVDGIAMAGRY 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVIA 144
D + L ++ PGP+T+VL E + ++ ++P GL ++ VR+P VR +
Sbjct: 74 VAFDPVSRRLAEAFWPGPLTIVLPLKERQDTDRPIHPLVTAGLSTLAVRMPHGR-VRDVI 132
Query: 145 RGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
L+S +A SAN +G+ S S +L R + D G P G + + +
Sbjct: 133 TALDSPVAAPSANTSGRISPTSAAAVAGDLGGRIDLILDAG--PCGIGVESTIVKVDGDQ 190
Query: 204 FKILRPGS-AKEETIAIL 220
+LRPG A EE A L
Sbjct: 191 VHLLRPGGLAAEEIEAFL 208
>gi|148253877|ref|YP_001238462.1| translation factor SUA5 [Bradyrhizobium sp. BTAi1]
gi|146406050|gb|ABQ34556.1| translation factor SUA5 [Bradyrhizobium sp. BTAi1]
Length = 333
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 10/185 (5%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G ++A PT+T+YG DA ++ A+ R+Y+ KGR +PL V DV+ R D +
Sbjct: 31 GGLVAFPTETVYGLGADASNAAAITRLYQAKGRPAFNPLIAHVADVAAARRIGRFDAVAE 90
Query: 97 GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSA 156
L + PGP+T+VL + E + GL+++ +RVP R + A+ SA
Sbjct: 91 RLAQAFWPGPLTLVLPQAEGCPVADLATAGLDTVAIRVPAHPVARALLAAFGGAVVAPSA 150
Query: 157 NLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK---ILRPGSA 212
N++G S +++ +L R + DGG + G V+ T +G F +LRPG
Sbjct: 151 NISGHVSPTMAAHVAADLDGRIDLILDGGAVEVG------VESTIIGCFDEPTLLRPGGV 204
Query: 213 KEETI 217
E I
Sbjct: 205 PREAI 209
>gi|254247338|ref|ZP_04940659.1| Sua5/YciO/YrdC/YwlC [Burkholderia cenocepacia PC184]
gi|124872114|gb|EAY63830.1| Sua5/YciO/YrdC/YwlC [Burkholderia cenocepacia PC184]
Length = 342
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 15/191 (7%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLP- 95
G+++A PT+T+YG DA + EAV RIY KGR P+ + + D +A D LP
Sbjct: 24 GQLVAFPTETVYGLGGDAANPEAVARIYAAKGRPANHPVIVHLPPGGDPGYWA--DDLPA 81
Query: 96 --HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI------ARGL 147
H L+D+ PGP+T++L R + + +++ G +S+G+R P + + RG
Sbjct: 82 DAHALIDAFWPGPLTLILKR--HARIPDAVSGGQDSVGLRCPSHPVAQALLAAFSARRGG 139
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A SAN G S + + + + V DGG G ST++DL+R G +L
Sbjct: 140 HGGVAAPSANRFGHVSPTTAQHVRDEFGDTVHVLDGGASEVG-IESTILDLSR-GFPALL 197
Query: 208 RPGSAKEETIA 218
RPG + IA
Sbjct: 198 RPGHVTPQQIA 208
>gi|117925136|ref|YP_865753.1| translation factor SUA5 [Magnetococcus marinus MC-1]
gi|117608892|gb|ABK44347.1| translation factor SUA5 [Magnetococcus marinus MC-1]
Length = 206
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 92/191 (48%), Gaps = 7/191 (3%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A Q L+ G VI PTDT YG C + + V R+ IK T L + D+SDI +
Sbjct: 19 QAAQILQEGGVIVYPTDTTYGLGCVMSNRKGVERVVRIKQLSDTHQLTLLCADLSDIANY 78
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A D+ + LL LPGP T VL S + K + P ++IG+RVP+ + +
Sbjct: 79 ARVDNSCYRLLKRFLPGPYTFVLE--ASREVPKKILPRRKTIGLRVPNHQICHALLELVG 136
Query: 149 SALALTSANLTGQPSSVSVKDF--ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
L TS L G + + L + + DGG+LP ST++D+T G+ ++
Sbjct: 137 EPLLSTSVRLPGHEEIFTDPSLIRDQLEHQVDLIIDGGILPE--HPSTIIDMTS-GEPEL 193
Query: 207 LRPGSAKEETI 217
LR G+ I
Sbjct: 194 LREGAGDSAAI 204
>gi|323339963|ref|ZP_08080230.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus ruminis ATCC
25644]
gi|417974450|ref|ZP_12615269.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus ruminis ATCC
25644]
gi|323092605|gb|EFZ35210.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus ruminis ATCC
25644]
gi|346329180|gb|EGX97480.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus ruminis ATCC
25644]
Length = 339
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 15/213 (7%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T E+A L+ G++IA PT+T+YG DA + +AV R+Y KGR +PL + V
Sbjct: 8 TTDEIEKAANELRLGELIAFPTETVYGLGADATNEQAVKRVYLAKGRPSDNPLIVTVSSR 67
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
+ + + LP L+D+ PGP+T++L E + L K++ GLE+ R+P +
Sbjct: 68 KMVEEY--VESLPERAVKLMDAFWPGPLTMILKIKEGA-LSKAVTGGLETAAFRMPQN-- 122
Query: 140 VRVIARGLESA---LALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTV 195
+ + +ESA + SAN +G+PS + + + +L R A + D G G ST+
Sbjct: 123 -KATLKLIESAGVPIVGPSANSSGKPSPTTAQHVYHDLEGRIAGILDDGPTQVG-VESTI 180
Query: 196 VDLTRLGKFKILRPGSAKEETIAILEKHSLVEE 228
+DL+ ILRPG+ E + + K +++ +
Sbjct: 181 IDLSSEHPV-ILRPGAVTVEQLEEVLKETVLSD 212
>gi|119897671|ref|YP_932884.1| hypothetical protein azo1380 [Azoarcus sp. BH72]
gi|119670084|emb|CAL93997.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 343
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 7/204 (3%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
V PA E + + A +AL+ G+++ +PT+T+YG A DA + AV RI+ KGR PL +
Sbjct: 6 VVPAQEDNIQSAAEALRAGELVGLPTETVYGLAADARNPVAVRRIFAAKGRPADHPLIVH 65
Query: 79 VGDVSDINRFAVTDHLPHGLLD-SLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
+ + ++++A + L + PGP+T++L R ++ + G +++GVRVP
Sbjct: 66 LPALDQLSQWAAAVPVEAVALGRAFWPGPLTLILRR--QPHVPDEVTGGQDTVGVRVPAH 123
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVV 196
+ S LA SAN G+ S + E L + A V DGG G ST++
Sbjct: 124 PAALALLAAFGSGLAAPSANRFGRISPTTAAHVAEELGDAVAMVIDGGACEVG-IESTIL 182
Query: 197 DLTRLGKFK--ILRPGSAKEETIA 218
DL+RL ILRPG+ + IA
Sbjct: 183 DLSRLDTCGPVILRPGAISADAIA 206
>gi|392949346|ref|ZP_10314929.1| translation factor, SUA5 family [Lactobacillus pentosus KCA1]
gi|392435459|gb|EIW13400.1| translation factor, SUA5 family [Lactobacillus pentosus KCA1]
Length = 339
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 101/183 (55%), Gaps = 5/183 (2%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT-DHLP 95
G+++A PT+T+YG DA + +AV ++Y KGR +PL + V DV+ + RFA+
Sbjct: 21 GQLVAFPTETVYGLGADATNVDAVKQVYRAKGRPSDNPLIVHVADVATVERFAMPLSEAA 80
Query: 96 HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTS 155
L+ + PGP+T++ + + + L + GL++ R PD+ + R ++ + S
Sbjct: 81 KKLIKAFWPGPLTMIF-KLKPNALATEVTGGLQTAAFRNPDNAATLALIRAAKTPIVGPS 139
Query: 156 ANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKE 214
AN +G+PS +++ + +L + A + D G G STV+DL+ + ILRPG+
Sbjct: 140 ANTSGKPSPTLAEHVYHDLNGKIAGILDDGPTKVG-VESTVLDLST-DQPAILRPGAITP 197
Query: 215 ETI 217
E I
Sbjct: 198 EAI 200
>gi|313673749|ref|YP_004051860.1| sua5/ycio/yrdc/ywlc family protein [Calditerrivibrio nitroreducens
DSM 19672]
gi|312940505|gb|ADR19697.1| Sua5/YciO/YrdC/YwlC family protein [Calditerrivibrio nitroreducens
DSM 19672]
Length = 341
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 108/203 (53%), Gaps = 15/203 (7%)
Query: 23 TEAHAEEAI----QALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
TE + +EA+ + + G + +PT+T+YG A +S+A+ +I+E K R +PL +
Sbjct: 13 TEENFKEALKIASEIISNGGIAVIPTETVYGIAASIYNSDAIQKIFEAKNRPMDNPLIVH 72
Query: 79 VGDVSDINRFAVTDHL---PHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVP 135
+ D +N +TD + L+ PGP+T++ E ++K + GL +I VR+P
Sbjct: 73 ISDPKQLND--LTDEINETSRKLIQQFWPGPLTLIFKAKEG--VDKKVTGGLNTIAVRMP 128
Query: 136 DSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGST 194
D+ F + + LA SAN++G+PS + D FE L + + D G++ G ST
Sbjct: 129 DNAFTLKLIE-MTGPLAAPSANISGKPSGTEISDIFEELNGKVDVIVDEGIVRCGLE-ST 186
Query: 195 VVDLTRLGKFKILRPGSAKEETI 217
V++ T + ILR G+ +E I
Sbjct: 187 VIN-TLINPPVILRKGTISKEMI 208
>gi|153816408|ref|ZP_01969076.1| hypothetical protein RUMTOR_02661 [Ruminococcus torques ATCC 27756]
gi|317502463|ref|ZP_07960626.1| hypothetical protein HMPREF1026_02571 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089289|ref|ZP_08338191.1| hypothetical protein HMPREF1025_01774 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336439449|ref|ZP_08619062.1| hypothetical protein HMPREF0990_01456 [Lachnospiraceae bacterium
1_1_57FAA]
gi|145846243|gb|EDK23161.1| Sua5/YciO/YrdC/YwlC family protein [Ruminococcus torques ATCC
27756]
gi|316896148|gb|EFV18256.1| hypothetical protein HMPREF1026_02571 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330405841|gb|EGG85370.1| hypothetical protein HMPREF1025_01774 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336016126|gb|EGN45921.1| hypothetical protein HMPREF0990_01456 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 507
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 10/188 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
EEA LK G ++A PT+T+YG DA EA + Y KGR +PL + + + D+ +
Sbjct: 19 EEAGMILKNGGLVAFPTETVYGLGADALKEEAAMKTYAAKGRPSDNPLIVHIAEYEDLRK 78
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
AV ++P L PGP+T++ + E + GL+++ VR+P R +
Sbjct: 79 IAV--NIPAETDALAAHFWPGPLTMIFEKSEV--VPYGTTGGLDTVAVRMPTDEVARALI 134
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
R ++ SAN +G+PS + E+L + + DGG + G ST++D+T
Sbjct: 135 RAAGGFVSAPSANTSGRPSPTLAEHVAEDLGGKIDMILDGGAVEIGLE-STILDMTVTPP 193
Query: 204 FKILRPGS 211
ILRPG+
Sbjct: 194 M-ILRPGA 200
>gi|346309447|ref|ZP_08851536.1| hypothetical protein HMPREF9457_03245 [Dorea formicigenerans
4_6_53AFAA]
gi|345899222|gb|EGX69072.1| hypothetical protein HMPREF9457_03245 [Dorea formicigenerans
4_6_53AFAA]
Length = 353
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 100/189 (52%), Gaps = 6/189 (3%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA-VTD 92
LK G ++A PT+T+YG DA + A +IY KGR +PL + + ++ +++ A +
Sbjct: 29 LKEGGLVAFPTETVYGLGADALNKTASTKIYAAKGRPSDNPLIVHITNMGALDKIADIIP 88
Query: 93 HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
+ + + D+ PGP+T++ + E E + GL+++ VR+P R + +A
Sbjct: 89 EVAYKVADACWPGPLTMIFQKTEEVPYETT--GGLDTVAVRMPSDEIARALIDAGGGYIA 146
Query: 153 LTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGS 211
SAN +G+PS + E+L + + DGG + G ST++D+T ILRPG+
Sbjct: 147 APSANTSGRPSPTKAEHVEEDLSGKIEMILDGGAVDIG-VESTILDMTVTPPM-ILRPGA 204
Query: 212 AKEETIAIL 220
+E + L
Sbjct: 205 ITKEMLTEL 213
>gi|206561172|ref|YP_002231937.1| hypothetical protein BCAL2835 [Burkholderia cenocepacia J2315]
gi|444355967|ref|ZP_21157676.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia cenocepacia BC7]
gi|444370714|ref|ZP_21170352.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198037214|emb|CAR53135.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
gi|443596938|gb|ELT65400.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia cenocepacia
K56-2Valvano]
gi|443607749|gb|ELT75430.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia cenocepacia BC7]
Length = 342
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 15/191 (7%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLP- 95
G+++A PT+T+YG DA + EAV RIY KGR P+ + + D +A D LP
Sbjct: 24 GQLVAFPTETVYGLGGDAANPEAVARIYAAKGRPANHPVIVHLPPGGDPGYWA--DDLPA 81
Query: 96 --HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI------ARGL 147
H L+D+ PGP+T++L R + + +++ G +S+G+R P + + RG
Sbjct: 82 DAHALIDAFWPGPLTLILKR--HARIPDAVSGGQDSVGLRCPSHPVAQALLAAFSARRGG 139
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A SAN G S + + + + V DGG G ST++DL+R G +L
Sbjct: 140 HGGVAAPSANRFGHVSPTTAQHVRDEFGDTVHVLDGGASEVG-IESTILDLSR-GFPALL 197
Query: 208 RPGSAKEETIA 218
RPG + IA
Sbjct: 198 RPGHVTPQQIA 208
>gi|421868432|ref|ZP_16300080.1| YrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Burkholderia cenocepacia
H111]
gi|358071454|emb|CCE50958.1| YrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Burkholderia cenocepacia
H111]
Length = 342
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 15/191 (7%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLP- 95
G+++A PT+T+YG DA + EAV RIY KGR P+ + + D +A D LP
Sbjct: 24 GQLVAFPTETVYGLGGDAANPEAVARIYAAKGRPANHPVIVHLPPGGDPGYWA--DDLPA 81
Query: 96 --HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI------ARGL 147
H L+D+ PGP+T++L R + + +++ G +S+G+R P + + RG
Sbjct: 82 DAHALIDAFWPGPLTLILKR--HARIPDAVSGGQDSVGLRCPSHPVAQALLAAFGARRGG 139
Query: 148 ESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A SAN G S + + + + V DGG G ST++DL+R G +L
Sbjct: 140 HGGVAAPSANRFGHVSPTTAQHVRDEFGDTVHVLDGGASEVG-IESTILDLSR-GFPALL 197
Query: 208 RPGSAKEETIA 218
RPG + IA
Sbjct: 198 RPGHVTPQQIA 208
>gi|423721593|ref|ZP_17695775.1| translation factor, SUA5-type, RNA-binding [Geobacillus
thermoglucosidans TNO-09.020]
gi|383365396|gb|EID42692.1| translation factor, SUA5-type, RNA-binding [Geobacillus
thermoglucosidans TNO-09.020]
Length = 348
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 104/193 (53%), Gaps = 7/193 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA Q LK G+V+A PT+T+YG +A ++AV +I+ KGR +PL + + V ++
Sbjct: 22 KEAAQWLKAGEVVAFPTETVYGLGANAKDTKAVEKIFAAKGRPSDNPLIVHIAHVKQLDE 81
Query: 88 FAVTD--HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
V+D + L++ PGP+T++L + E +K + GL ++ VR+PD +
Sbjct: 82 I-VSDVPRIAGMLIERFWPGPLTLILPKKEGVISDK-VTAGLSTVAVRMPDHPVALALIE 139
Query: 146 GLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
LA SAN++G+PS + + F +L R + DGG G STV+D T
Sbjct: 140 ESGLPLAAPSANISGRPSPTTAAHVFTDLNGRIVGIVDGGETGIG-VESTVLDCTS-DVP 197
Query: 205 KILRPGSAKEETI 217
ILRPG +E +
Sbjct: 198 TILRPGGVTKEAL 210
>gi|296109437|ref|YP_003616386.1| Sua5/YciO/YrdC/YwlC family protein [methanocaldococcus infernus ME]
gi|295434251|gb|ADG13422.1| Sua5/YciO/YrdC/YwlC family protein [Methanocaldococcus infernus ME]
Length = 313
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 97/183 (53%), Gaps = 4/183 (2%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++ ATE + ++A + ++ G ++A PT+T+YG DA + EAV +I+E+K R P+ +
Sbjct: 1 MILKATEENIKKAAEVIRKGGLVAFPTETVYGLGADALNKEAVAKIFEVKQRPLIDPVIV 60
Query: 78 CVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
+ D+ + A L + L + PGP+T+VL + E + + GL+ + +R+P
Sbjct: 61 HISKFEDLEKLAYPTELAYKLAKAFWPGPLTMVLPKKEV--VPSIVTAGLDFVAIRMPAH 118
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVV 196
+ ++ +A SANL + S + +E L ++ + DGG G ST++
Sbjct: 119 PVALKLIEESKTFIAAPSANLFSKLSPTRAEHVYEQLGDKVDIILDGGKCDVG-VESTII 177
Query: 197 DLT 199
DLT
Sbjct: 178 DLT 180
>gi|407781733|ref|ZP_11128950.1| putative translation factor [Oceanibaculum indicum P24]
gi|407207359|gb|EKE77296.1| putative translation factor [Oceanibaculum indicum P24]
Length = 319
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 98/200 (49%), Gaps = 3/200 (1%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ PAT+A +EA L+ G+++A PT+T+YG DA AV I+ KGR +PL
Sbjct: 7 ILPATDAAIDEAAALLRAGQLVAFPTETVYGLGGDATDDRAVAAIFAAKGRPSFNPLISH 66
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
+ DV+ A+ L L + PGP+T+VL R + GL++I +RVP
Sbjct: 67 LPDVAHARELALFTPLAEKLAAAFWPGPLTMVLKRRPDCPVSHLACAGLDTIALRVPAHP 126
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVD 197
+ + + SAN +G+ S S + E L R A V DGG G STVVD
Sbjct: 127 VAKRLLEATGRPVVAPSANPSGRVSPTSAEHVAEGLAGRLALVLDGGPCAIGLE-STVVD 185
Query: 198 LTRLGKFKILRPGSAKEETI 217
T + +LRPG E +
Sbjct: 186 ATG-DRPVLLRPGGVTLEAL 204
>gi|255525830|ref|ZP_05392759.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium carboxidivorans P7]
gi|255510473|gb|EET86784.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium carboxidivorans P7]
Length = 350
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 22/209 (10%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA +K G ++A PT+T+YG +A + AV +I+E KGR +P+ + D +IN
Sbjct: 20 EAANVIKEGGLVAFPTETVYGLGGNALNPSAVKKIFEAKGRPQDNPVIAHIADFKEIN-- 77
Query: 89 AVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
A+ +P L++ PGP+T++L + E + GL+ +G+R+P + R R
Sbjct: 78 ALVKEIPEVAKKLMEKFWPGPMTLILQKSEI--VPDVTTAGLKCVGIRMPSNIIAREFIR 135
Query: 146 GLESALALTSANLTGQPSSVSVKDFENLWERCACVYD-------GGVLPSGRAGSTVVDL 198
+A SAN++G+PS V ERC D GG + STV+D
Sbjct: 136 ACGVPIAAPSANISGRPSPTDV-------ERCIEDMDGKIDYIIGGEMCDIGVESTVIDC 188
Query: 199 TRLGKFKILRPGSAKEETIAILEKHSLVE 227
T + ILRPG E + ++K + ++
Sbjct: 189 T-VQPVCILRPGGITLEMLKEVDKDAYID 216
>gi|421900075|ref|ZP_16330438.1| translation factor, sua5 type protein [Ralstonia solanacearum
MolK2]
gi|206591281|emb|CAQ56893.1| translation factor, sua5 type protein [Ralstonia solanacearum
MolK2]
Length = 336
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 111/205 (54%), Gaps = 16/205 (7%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
+ A +EA++ L+ G+++A PT+T+YG DA + +A+ RIY +KGR P+ + V D
Sbjct: 12 SAARLDEAVRRLEAGELVAFPTETVYGLGADAENPQAIARIYALKGRPSNHPVIVHVVDG 71
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
+D+ +A D LP L+++ PGP+T++L R + ++ ++ G +SIG+R P
Sbjct: 72 ADLTYWA--DDLPGIAVQLVEAFWPGPLTLILKR--APHIPAAVAGGQDSIGLRCPSHPV 127
Query: 140 VRVI----ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTV 195
+ + RG +A SAN GQ S + + + + V +G G ST+
Sbjct: 128 AQALLSRFKRG-RGGIAAPSANKFGQVSPTTAQHVRDEFGEAIFVLEGDGADVG-IESTI 185
Query: 196 VDLTRLGKF---KILRPGSAKEETI 217
VDL+RL + +LRPG+ E I
Sbjct: 186 VDLSRLDQGIGPVLLRPGAITPEDI 210
>gi|269957074|ref|YP_003326863.1| Sua5/YciO/YrdC/YwlC family protein [Xylanimonas cellulosilytica DSM
15894]
gi|269305755|gb|ACZ31305.1| Sua5/YciO/YrdC/YwlC family protein [Xylanimonas cellulosilytica DSM
15894]
Length = 346
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 97/192 (50%), Gaps = 11/192 (5%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
L+ G ++A+PT+T+YG A DA V IY KGR +PL + V D+ AV
Sbjct: 20 LRAGGIVALPTETVYGLAGDALDPAVVGAIYAAKGRPSDNPLIVHVAAFDDLP--AVVRD 77
Query: 94 LP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESA 150
+P L ++ PGP+T+VL R + + + GL+++ VRVP R + R
Sbjct: 78 VPGSARALAEAFWPGPLTMVLPRRDV--VPDRVTAGLDTVAVRVPAHEAFRAVLRLAGVP 135
Query: 151 LALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRP 209
LA SAN G PS + + +L R V DGG G STVVDLT ++LRP
Sbjct: 136 LAAPSANQAGSPSPTTAEHVLHDLDGRIPAVLDGGPCTVG-VESTVVDLTSTPP-RLLRP 193
Query: 210 GSAK-EETIAIL 220
G EE A+L
Sbjct: 194 GGVSLEELRAVL 205
>gi|28210066|ref|NP_781010.1| SUA5 protein [Clostridium tetani E88]
gi|28202501|gb|AAO34947.1| SUA5 protein [Clostridium tetani E88]
Length = 350
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 105/187 (56%), Gaps = 10/187 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+E +AL+ GK++ PT+T+YG +A +AV +I+E KGR +PL + + ++ +I
Sbjct: 19 KECGEALRNGKLVVFPTETVYGLGANALKEDAVKKIFEAKGRPQDNPLIVHISELEEI-- 76
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ + +P + L++ PGP+T++L + SS + + GL S+G+R+P + R +
Sbjct: 77 APLVEEVPKIAYKLMEKFWPGPMTIILPK--SSLIPSRTSGGLNSVGIRMPSNEIARKLI 134
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ + +A SAN++G+PS +++ E+L + + G G STV+D T
Sbjct: 135 KEAKVPIAAPSANISGRPSPTNIETCIEDLKGKVDYIIGGEKCDVG-VESTVIDCTIYPP 193
Query: 204 FKILRPG 210
+LRPG
Sbjct: 194 C-VLRPG 199
>gi|312793262|ref|YP_004026185.1| sua5/ycio/yrdc/ywlc family protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180402|gb|ADQ40572.1| Sua5/YciO/YrdC/YwlC family protein [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 348
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 103/186 (55%), Gaps = 6/186 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A L+ G ++A PT+T+YG +A +AV++I+ KGR +PL + V +
Sbjct: 17 EKAALILREGGLVAFPTETVYGLGANALLKDAVDKIFWAKGRPQDNPLIVHVSSKDMLEM 76
Query: 88 FA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A +TD + L++ PGP+T+VL + + + +++ GL ++GVR+P + + R
Sbjct: 77 CAEITDERVYMLIERFWPGPLTIVLPKKDV--IPENVTAGLSTVGVRMPANKIALELIRL 134
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN++G+PS K E+L + + DGG G STVVDL+ K
Sbjct: 135 SGVPVAAPSANVSGKPSPTEAKHVIEDLMGKVDVIIDGGKCSFGLE-STVVDLSG-EKAV 192
Query: 206 ILRPGS 211
ILRPG+
Sbjct: 193 ILRPGA 198
>gi|126734644|ref|ZP_01750390.1| Sua5/YciO/YrdC family protein [Roseobacter sp. CCS2]
gi|126715199|gb|EBA12064.1| Sua5/YciO/YrdC family protein [Roseobacter sp. CCS2]
Length = 348
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 5/201 (2%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
++RP A E+A + L+ G +++ PT+T+YG DAC+ AV RIYE KGR +PL +
Sbjct: 41 MLRPDV-AGLEKAAEILRAGGLVSFPTETVYGLGADACNDRAVARIYEAKGRPSFNPLIV 99
Query: 78 CVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
V D++ R+ + L + PG +T+VL + + K + GL+++ +RVPD
Sbjct: 100 HVPDMAAAERYCDFNETARQLAQAFWPGALTLVLPVKAEAGISKLVTAGLDTLAIRVPDH 159
Query: 138 NFVRVIARGLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVV 196
+ +A SAN +G S +++ L +R V DGG G ST+V
Sbjct: 160 PVAGALLSAFAGPVAAPSANPSGYVSPTMAAHVAAGLGDRIDAVIDGGACLVG-VESTIV 218
Query: 197 DLTRLGKFKILRPGSAKEETI 217
+G +LR G E +
Sbjct: 219 SC--VGTPSLLRAGGTPVEVL 237
>gi|336476973|ref|YP_004616114.1| Sua5/YciO/YrdC/YwlC family protein [Methanosalsum zhilinae DSM
4017]
gi|335930354|gb|AEH60895.1| Sua5/YciO/YrdC/YwlC family protein [Methanosalsum zhilinae DSM
4017]
Length = 362
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 108/204 (52%), Gaps = 13/204 (6%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E E A Q +K +A PT+T+YG +A AVN+I+ KGR +PL + +
Sbjct: 22 EQTIEAASQIIKDAGTVAFPTETVYGLGANALDPVAVNKIFRAKGRPADNPLIVHIATKK 81
Query: 84 DINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
+ F + ++P L+D+ PGP+T++L+R + GL+++ VR+P +
Sbjct: 82 QL--FEIAKNIPTEALDLIDTFWPGPLTIILNRRRC--VPNITTGGLDTVAVRMPSNRIA 137
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
+ + + +A SAN++G+PS + + ++ + + DGG + G STV+DLT
Sbjct: 138 IELIKRANTPIAAPSANISGRPSPTNAQHVIADMEGKIDAIIDGGSVEIG-IESTVLDLT 196
Query: 200 RLGKFKILRPGSAKEETIAILEKH 223
+ K ILRPG E IA L++H
Sbjct: 197 SI-KPTILRPG---EIGIADLKEH 216
>gi|386334443|ref|YP_006030614.1| translation factor, sua5 type protein [Ralstonia solanacearum Po82]
gi|334196893|gb|AEG70078.1| translation factor, sua5 type protein [Ralstonia solanacearum Po82]
Length = 336
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 111/205 (54%), Gaps = 16/205 (7%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
+ A +EA++ L+ G+++A PT+T+YG DA + +A+ RIY +KGR P+ + V D
Sbjct: 12 SAARLDEAVRRLEAGELVAFPTETVYGLGADAENPQAIARIYALKGRPSNHPVIVHVVDG 71
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
+D+ +A D LP L+++ PGP+T++L R + ++ ++ G +SIG+R P
Sbjct: 72 ADLTYWA--DDLPGIAVQLVEAFWPGPLTLILKR--APHIPAAVAGGQDSIGLRCPSHPV 127
Query: 140 VRVI----ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTV 195
+ + RG +A SAN GQ S + + + + V +G G ST+
Sbjct: 128 AQALLSRFKRG-RGGIAAPSANKFGQVSPTTAQHVRDEFGEAIFVLEGDGADVG-IESTI 185
Query: 196 VDLTRLGKF---KILRPGSAKEETI 217
VDL+RL + +LRPG+ E I
Sbjct: 186 VDLSRLDQGVGPVLLRPGAITPEDI 210
>gi|329121079|ref|ZP_08249710.1| Sua5/YciO/YrdC/YwlC family protein [Dialister micraerophilus DSM
19965]
gi|327471241|gb|EGF16695.1| Sua5/YciO/YrdC/YwlC family protein [Dialister micraerophilus DSM
19965]
Length = 345
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 104/194 (53%), Gaps = 6/194 (3%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT-D 92
++ G ++A PT+T+YG +A SS+A +IY+ KGR +PL + V D S + F +
Sbjct: 24 IRKGGLVAFPTETVYGLGGNALSSKAAKKIYKAKGRPSDNPLIVHVADKSQVKNFVKNIN 83
Query: 93 HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
L H L+D PGP+T+V + + E S GL+++ +R PD+N R + R + LA
Sbjct: 84 DLEHKLMDLYWPGPLTIVFEKKDIIPYETS--GGLDTVAIRCPDNNATRALIRAAKVPLA 141
Query: 153 LTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGS 211
SAN++ +PS K N L R V D G G ST+V + GK I RPG+
Sbjct: 142 GPSANISTRPSPTYAKSVLNDLDGRINAVIDNGDSKIGLE-STIVAVNE-GKIIIYRPGA 199
Query: 212 AKEETIAILEKHSL 225
+E ++ L SL
Sbjct: 200 ITQEMLSELAPTSL 213
>gi|154482619|ref|ZP_02025067.1| hypothetical protein EUBVEN_00286 [Eubacterium ventriosum ATCC
27560]
gi|149736519|gb|EDM52405.1| Sua5/YciO/YrdC/YwlC family protein [Eubacterium ventriosum ATCC
27560]
Length = 359
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 107/193 (55%), Gaps = 10/193 (5%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A + ++ G ++A PT+T+YG DA + EA +IY KGR +PL + D+ +
Sbjct: 24 QAGEIIRQGGLVAFPTETVYGLGADALNEEAAAKIYAAKGRPSDNPLIAHIADLEMLK-- 81
Query: 89 AVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
+ + +P L+D+ PGP+T++ ++ S+ + K GL+++ VR P+ + + +
Sbjct: 82 PLVEEIPPVAEKLMDAFWPGPMTLIFNK--SNLVPKGTTGGLDTVAVRYPNHPIAQALIK 139
Query: 146 GLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
++A SANL+G+PS ++ +++ R + DGG++ G ST++D+T +
Sbjct: 140 AAGVSIAAPSANLSGKPSPTLGEHVIDDMDGRIDMIIDGGMVGMGLE-STIIDVT-VNPP 197
Query: 205 KILRPGSAKEETI 217
ILRPG E +
Sbjct: 198 MILRPGFITYEMV 210
>gi|313891812|ref|ZP_07825417.1| Sua5/YciO/YrdC/YwlC family protein [Dialister microaerophilus UPII
345-E]
gi|313119806|gb|EFR42993.1| Sua5/YciO/YrdC/YwlC family protein [Dialister microaerophilus UPII
345-E]
Length = 345
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 104/194 (53%), Gaps = 6/194 (3%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT-D 92
++ G ++A PT+T+YG +A SS+A +IY+ KGR +PL + V D S + F +
Sbjct: 24 IRKGGLVAFPTETVYGLGGNALSSKAAKKIYKAKGRPSDNPLIVHVADKSQVKNFVKNIN 83
Query: 93 HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
L H L+D PGP+T+V + + E S GL+++ +R PD+N R + R + LA
Sbjct: 84 DLEHKLMDLYWPGPLTIVFEKKDIIPYETS--GGLDTVAIRCPDNNATRALIRAAKVPLA 141
Query: 153 LTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGS 211
SAN++ +PS K N L R V D G G ST+V + GK I RPG+
Sbjct: 142 GPSANISTRPSPTYAKSVLNDLDGRINAVIDNGDSKIGLE-STIVAVNE-GKIIIYRPGA 199
Query: 212 AKEETIAILEKHSL 225
+E ++ L SL
Sbjct: 200 ITQEMLSELAPTSL 213
>gi|94309452|ref|YP_582662.1| putative translation factor (SUA5) [Cupriavidus metallidurans CH34]
gi|93353304|gb|ABF07393.1| putative translation factor (SUA5) [Cupriavidus metallidurans CH34]
Length = 330
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 13/207 (6%)
Query: 20 RPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICV 79
R T A +EA++ L+ G+++A PT+T+YG DA + EAV RI+ KGR P+ + V
Sbjct: 4 RMPTAAELDEAVRLLEAGELVAFPTETVYGLGADAENPEAVARIFAAKGRPSNHPVIVHV 63
Query: 80 GDVSDINRFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPD 136
D +D+ + +D +P L+D+ PGP+T++L R ++++ ++ G +SIG+R P
Sbjct: 64 VDGADVGYW--SDDVPEAAQKLIDAFWPGPLTIILKR--AAHIPAAVAGGQDSIGLRCPS 119
Query: 137 SNFVRVIA---RGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGS 193
+ + R +A SAN GQ S + + + + V +G + G S
Sbjct: 120 HPVAQALLSRFRRGRGGIAAPSANKFGQVSPTTAEHVRDEFGGSVYVLEGDGVDVG-IES 178
Query: 194 TVVDLTRLGKFK--ILRPGSAKEETIA 218
++VDL+RL +LRPG+ +A
Sbjct: 179 SIVDLSRLDTAGPVLLRPGAITAAMMA 205
>gi|57640883|ref|YP_183361.1| putative translation factor Sua5p-like protein [Thermococcus
kodakarensis KOD1]
gi|57159207|dbj|BAD85137.1| putative translation factor Sua5p homolog [Thermococcus
kodakarensis KOD1]
Length = 339
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 96/178 (53%), Gaps = 11/178 (6%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
GK++A PT+T+YG DA + AV RI+E KGR +PL I + + D+ + V +P
Sbjct: 26 GKLVAFPTETVYGLGADALNEGAVRRIFEAKGRPADNPLIIHIASIDDLEK--VAREVPE 83
Query: 97 G---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L + PGP+T+VL + E L + GL+++ VR+P + R + LA
Sbjct: 84 KAKLLAERFWPGPLTLVLPKREEVPLVTT--GGLDTVAVRMPAHPIALALIRA-STPLAA 140
Query: 154 TSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
SAN++G+PS S + ++ + + + DGG G STVVDLT +LRPG
Sbjct: 141 PSANISGKPSPTSAEHVIDDFYGKIEGIIDGGETWVG-VESTVVDLTEEPPV-LLRPG 196
>gi|225570088|ref|ZP_03779113.1| hypothetical protein CLOHYLEM_06184 [Clostridium hylemonae DSM
15053]
gi|225161558|gb|EEG74177.1| hypothetical protein CLOHYLEM_06184 [Clostridium hylemonae DSM
15053]
Length = 350
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 15/208 (7%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA LK G ++A PT+T+YG DA S EA +IY KGR +PL + + ++ D+ +
Sbjct: 19 QEAGDILKRGGLVAFPTETVYGLGADALSEEAAAKIYAAKGRPSDNPLIVHITNMGDLEK 78
Query: 88 FAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
A + +P + PGP+T++ + + + GL+++ VR+P R +
Sbjct: 79 VA--EKIPAEAVKVAGKYWPGPLTMIFHKKDI--VPYGTTGGLDTVAVRMPSHEIAREVI 134
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS + + E++ R + DGG + G ST++D+T
Sbjct: 135 DAGGGFIAAPSANTSGRPSPTTAQHVKEDMDGRIEMIVDGGPVEIG-VESTILDMTVTPP 193
Query: 204 FKILRPGSAKEETI-----AILEKHSLV 226
ILRPG+ EE + A+ H+L+
Sbjct: 194 M-ILRPGAVTEEMLTELIGAVAVDHTLI 220
>gi|403530254|ref|YP_006664783.1| hypothetical protein RM11_0329 [Bartonella quintana RM-11]
gi|403232326|gb|AFR26069.1| hypothetical protein RM11_0329 [Bartonella quintana RM-11]
Length = 320
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 12/220 (5%)
Query: 19 VRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAIC 78
+ P A ++A+ L+ K++A+PT+T+YG A DA + AV I+ K R +PL
Sbjct: 3 ILPLNNASIKKAVALLEQDKLVALPTETVYGLAGDATNGRAVASIFFTKRRPKFNPLIAH 62
Query: 79 VGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSN 138
V + + D L L++ PGP+T+VL N+ GL ++ +R PDS
Sbjct: 63 VSGIVMAEHYVEIDFLSRRLMEVFWPGPLTLVLPLKAHHNIHPLTTSGLNTLAIRFPDSR 122
Query: 139 FVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVD 197
F V+ R LA SAN +G S S + F L E + DGG G ST+V
Sbjct: 123 FAEVVER-FGRPLAAPSANQSGCISPTSAEAVFAFLGESVPLILDGGACKIGLE-STIVK 180
Query: 198 LTRLGKFKILRPGS-AKEETIAI-------LEKHSLVEEP 229
+ + +LRPG A EE A+ L++ + +E P
Sbjct: 181 VCGESIY-LLRPGGLAAEEIEAVAGKPLKRLDQQAAIEAP 219
>gi|322435977|ref|YP_004218189.1| Sua5/YciO/YrdC/YwlC family protein [Granulicella tundricola
MP5ACTX9]
gi|321163704|gb|ADW69409.1| Sua5/YciO/YrdC/YwlC family protein [Granulicella tundricola
MP5ACTX9]
Length = 214
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAV-TD 92
+++G ++A+PTDT YG A D + AV RIY +K R PL++ + DV+ A D
Sbjct: 25 IESGLLVALPTDTFYGLAVDPVNLRAVERIYHLKNRARHKPLSLLIADVAQAYGLARECD 84
Query: 93 HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
L + PGP+T+++ G L + N G ++ +RVP++ R + L +
Sbjct: 85 TAFDRLAERFWPGPLTIIVKAGSKLPLRVTANTG--NVALRVPEAPIARAVVAKLGLPIT 142
Query: 153 LTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGK-FKILRP 209
TSANL G S E L ++ + DGG P+ R +T+VDL+ G + ILR
Sbjct: 143 ATSANLEGHAECTSASGVREQLGDKIPLIVDGG--PTARTVATTIVDLSGGGNSWTILRE 200
Query: 210 GSAKEETIAI 219
G+ IA+
Sbjct: 201 GAIPTHEIAL 210
>gi|91772214|ref|YP_564906.1| translation factor SUA5 [Methanococcoides burtonii DSM 6242]
gi|91711229|gb|ABE51156.1| SUA5-type translation factor [Methanococcoides burtonii DSM 6242]
Length = 350
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 108/212 (50%), Gaps = 11/212 (5%)
Query: 12 VENKAGLVRPATEAHAEEAIQA---LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKG 68
+ NK ++R + EE +A +K G ++A PT+T+YG +A +AV +I++ KG
Sbjct: 1 MSNKTLVIRADSHNFEEELTRAADIIKEGGIVAFPTETVYGLGANALDPDAVKKIFKAKG 60
Query: 69 RKHTSPLAICVGDVSDINRFAVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGL 127
R +PL + V N A L+D PGP+T++L + + + GL
Sbjct: 61 RPADNPLIVHVASKDQCNDLAKNISQTAFKLMDEFWPGPLTLILKAKKV--VPEITTGGL 118
Query: 128 ESIGVRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVL 186
+++G+R+P + R + LA SAN +G+PS S + ++L + + DGG++
Sbjct: 119 DTVGLRMPANEIALEFIRRSGTPLAAPSANTSGRPSPTSAEHVTQDLEGKIDAIIDGGMV 178
Query: 187 PSGRAGSTVVDLTRLGKF-KILRPGSAKEETI 217
G STVVD+T G ILRPG E I
Sbjct: 179 EIGLE-STVVDIT--GDIPAILRPGKVSAEDI 207
>gi|379718044|ref|YP_005310175.1| hypothetical protein PM3016_35 [Paenibacillus mucilaginosus 3016]
gi|378566716|gb|AFC27026.1| hypothetical protein PM3016_35 [Paenibacillus mucilaginosus 3016]
Length = 356
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 90/186 (48%), Gaps = 5/186 (2%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF-AVTD 92
LK G +A PT+T+YG DA S+EAV ++ KGR +PL + + D S + A +
Sbjct: 25 LKKGGTVAFPTETVYGLGADARSTEAVAAVFAAKGRPSDNPLIVHIADRSQLEELTAPPE 84
Query: 93 HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
LLD+ PGP+TVVL L + GL ++GVR+PD + +A
Sbjct: 85 EAVSRLLDAFWPGPLTVVLP-ARPGVLSPLVTAGLSTVGVRMPDHPVALALIAAAGCPVA 143
Query: 153 LTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGS 211
SAN +G+PS E+L R V DGG G STV + G ILRPG
Sbjct: 144 APSANRSGRPSPTRASHVLEDLGGRIGGVVDGGEAGVGLE-STVAEYAG-GALHILRPGG 201
Query: 212 AKEETI 217
+ +
Sbjct: 202 VTQAQL 207
>gi|334882099|emb|CCB83055.1| SUA5 family translation factor [Lactobacillus pentosus MP-10]
gi|339639300|emb|CCC18540.1| suA5 family translation factor [Lactobacillus pentosus IG1]
Length = 339
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 101/183 (55%), Gaps = 5/183 (2%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT-DHLP 95
G+++A PT+T+YG DA + +AV ++Y KGR +PL + V DV+ + RFA+
Sbjct: 21 GELVAFPTETVYGLGADATNVDAVKQVYRAKGRPSDNPLIVHVADVATVERFAMPLSEAA 80
Query: 96 HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTS 155
L+ + PGP+T++ + + + L + GL++ R PD+ + R ++ + S
Sbjct: 81 KKLIKAFWPGPLTMIF-KLKPNALATEVTGGLQTAAFRNPDNAATLALIRAAKTPIVGPS 139
Query: 156 ANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKE 214
AN +G+PS +++ + +L + A + D G G STV+DL+ + ILRPG+
Sbjct: 140 ANTSGKPSPTLAEHVYHDLNGKIAGILDDGPTKVG-VESTVLDLST-DQPAILRPGAITP 197
Query: 215 ETI 217
E I
Sbjct: 198 EAI 200
>gi|146278497|ref|YP_001168656.1| Sua5/YciO/YrdC/YwlC family protein [Rhodobacter sphaeroides ATCC
17025]
gi|145556738|gb|ABP71351.1| translation factor SUA5 [Rhodobacter sphaeroides ATCC 17025]
Length = 312
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
PAT +A + L G ++A+PT+T+YG A DA + AV RI+E KGR +PL + V
Sbjct: 8 PATPEGVADAARILAGGGLVALPTETVYGLAGDARNDRAVARIFEAKGRPQFNPLIVHVP 67
Query: 81 DVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
D+ R+A D L ++ PGP+T+VL E + ++ GL ++ +RVP
Sbjct: 68 DLEAARRYARFDAEALRLAETFWPGPLTLVLPL-EGEPVSPLVSAGLPTVAIRVPAHPLA 126
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGG 184
+ + R LA SAN +G+ S + E L R V DGG
Sbjct: 127 QRLMRAFGGPLAAPSANPSGRVSPTRPEHVLEGLAGRIEAVLDGG 171
>gi|255657436|ref|ZP_05402845.1| hypothetical protein CdifQCD-2_17451 [Clostridium difficile
QCD-23m63]
Length = 346
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 10/197 (5%)
Query: 26 HAEEAIQA--LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+ E IQA L+ GK + PT+T+YG +A AV +IYE KGR +PL + + +
Sbjct: 15 YEEIKIQAKLLREGKTVIFPTETVYGLGANALDENAVKKIYEAKGRPSDNPLIVHIYEKE 74
Query: 84 DINRFA--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
++ A ++D +++ L PGP+T++L++ + + S GL+++ +R+P + R
Sbjct: 75 EVYDLAKDISDK-AKLVIEKLWPGPITIILNKKDIIPYKTS--GGLDTVAIRMPSNIIAR 131
Query: 142 VIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
I + +A SAN++G+PS K +E + R + GG G STV+DLT
Sbjct: 132 AIIKEAGIPIAAPSANISGRPSPTKAKHVYEEMNGRVDGIVLGGDSNFGLE-STVLDLTE 190
Query: 201 LGKFKILRPGSAKEETI 217
ILRPGS +E +
Sbjct: 191 ETPM-ILRPGSITKEVL 206
>gi|114771324|ref|ZP_01448744.1| Sua5/YciO/YrdC family protein [Rhodobacterales bacterium HTCC2255]
gi|114548249|gb|EAU51136.1| Sua5/YciO/YrdC family protein [Rhodobacterales bacterium HTCC2255]
Length = 318
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 3/189 (1%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + LK+G ++A PT+T+YG +A +S+AV IY K R + +PL + V ++ +FA
Sbjct: 16 ASEILKSGGLVAFPTETVYGLGANALNSDAVAEIYTAKKRPNFNPLIVHVLNLETAQKFA 75
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
V + L + PGP+TVV +NL + + GL+++ +RVP R +
Sbjct: 76 VFNKDTLLLANKFWPGPLTVVAPIKNKTNLSRLITAGLDTVAIRVPAHPVARKLLETFNG 135
Query: 150 ALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILR 208
+A SAN +G SS S ++ L R + +GG G ST++ L+ G+ ILR
Sbjct: 136 PIAAPSANPSGSISSTSAAHVKSGLGGRIQAILNGGKCDVGLE-STII-LSNNGQCNILR 193
Query: 209 PGSAKEETI 217
G E+ I
Sbjct: 194 SGGISEKEI 202
>gi|312112634|ref|YP_003990950.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus sp. Y4.1MC1]
gi|336237096|ref|YP_004589712.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|311217735|gb|ADP76339.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus sp. Y4.1MC1]
gi|335363951|gb|AEH49631.1| Sua5/YciO/YrdC/YwlC family protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 351
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 104/193 (53%), Gaps = 7/193 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA Q LK G+V+A PT+T+YG +A ++AV +I+ KGR +PL + + V ++
Sbjct: 25 KEAAQWLKAGEVVAFPTETVYGLGANAKDTKAVEKIFAAKGRPSDNPLIVHIAHVKQLDE 84
Query: 88 FAVTD--HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
V+D + L++ PGP+T++L + E +K + GL ++ VR+PD +
Sbjct: 85 I-VSDVPRIAGMLIERFWPGPLTLILPKKEGVISDK-VTAGLSTVAVRMPDHPVALALIE 142
Query: 146 GLESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
LA SAN++G+PS + + F +L R + DGG G STV+D T
Sbjct: 143 ESGLPLAAPSANISGRPSPTTAAHVFTDLNGRIVGIVDGGETGIG-VESTVLDCTS-DVP 200
Query: 205 KILRPGSAKEETI 217
ILRPG +E +
Sbjct: 201 TILRPGGVTKEAL 213
>gi|85375447|ref|YP_459509.1| translation factor [Erythrobacter litoralis HTCC2594]
gi|84788530|gb|ABC64712.1| putative translation factor [Erythrobacter litoralis HTCC2594]
Length = 314
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 99/194 (51%), Gaps = 3/194 (1%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A + + G ++AVPT+T+YG A A +AV IY KGR +PL + V D + R
Sbjct: 19 QAARIINAGGLVAVPTETVYGLAARADDPDAVAAIYAAKGRPSFNPLIVHVLDPAAAGRL 78
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
D L PGP+T+VL +++++ ++ GL ++ VRVP +R + E
Sbjct: 79 VEMDDKAQALAGRFWPGPLTMVLPLRDAADVAGAVTAGLPTLAVRVPAHPLMRELLTLAE 138
Query: 149 SALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+ LA SAN++ S S + L R V DGG +G ST+V L G + +L
Sbjct: 139 APLAAPSANVSESVSPTSPGHVLKTLDGRIDAVLDGGECIAGLE-STIVALRGDGAWSLL 197
Query: 208 RPGS-AKEETIAIL 220
RPG AKE I L
Sbjct: 198 RPGPIAKEALIEAL 211
>gi|17987811|ref|NP_540445.1| SUA5 protein [Brucella melitensis bv. 1 str. 16M]
gi|225851941|ref|YP_002732174.1| Sua5/YciO/YrdC/YwlC family protein [Brucella melitensis ATCC 23457]
gi|256264548|ref|ZP_05467080.1| Sua5/YciO/YrdC/YwlC protein [Brucella melitensis bv. 2 str. 63/9]
gi|260563482|ref|ZP_05833968.1| Sua5/YciO/YrdC/YwlC protein family [Brucella melitensis bv. 1 str.
16M]
gi|265990535|ref|ZP_06103092.1| Sua5/YciO/YrdC/YwlC family protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|384210792|ref|YP_005599874.1| Sua5/YciO/YrdC/YwlC family protein [Brucella melitensis M5-90]
gi|384407892|ref|YP_005596513.1| Sua5/YciO/YrdC/YwlC family protein [Brucella melitensis M28]
gi|384444510|ref|YP_005603229.1| Sua5/YciO/YrdC/YwlC family protein [Brucella melitensis NI]
gi|17983537|gb|AAL52709.1| sua5 protein [Brucella melitensis bv. 1 str. 16M]
gi|225640306|gb|ACO00220.1| Sua5/YciO/YrdC/YwlC family protein [Brucella melitensis ATCC 23457]
gi|260153498|gb|EEW88590.1| Sua5/YciO/YrdC/YwlC protein family [Brucella melitensis bv. 1 str.
16M]
gi|263001319|gb|EEZ13894.1| Sua5/YciO/YrdC/YwlC family protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094882|gb|EEZ18620.1| Sua5/YciO/YrdC/YwlC protein [Brucella melitensis bv. 2 str. 63/9]
gi|326408439|gb|ADZ65504.1| Sua5/YciO/YrdC/YwlC family protein [Brucella melitensis M28]
gi|326538155|gb|ADZ86370.1| Sua5/YciO/YrdC/YwlC family protein [Brucella melitensis M5-90]
gi|349742506|gb|AEQ08049.1| Sua5/YciO/YrdC/YwlC family protein [Brucella melitensis NI]
Length = 323
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL V ++ R+
Sbjct: 14 RAVEVLRRGGLVAIPTETVYGLAADAANGEGVAGIFAAKGRPQFNPLIAHVDGIAMAGRY 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVIA 144
D + L ++ PGP+T+VL E + E+ ++P GL ++ VR+P VR +
Sbjct: 74 VAFDPVSRRLAEAFWPGPLTIVLPLKERQDTERPIHPLVTAGLSTLAVRMPHGR-VRDVI 132
Query: 145 RGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
L+S +A SAN +G+ S S +L + + D G P G + + +
Sbjct: 133 TALDSPVAAPSANTSGRISPTSAAAVAGDLGGQIDLILDAG--PCGVGVESTIVKVDGDQ 190
Query: 204 FKILRPGS-AKEETIAIL 220
+LRPG A EE A L
Sbjct: 191 VHLLRPGGLAAEEIEAFL 208
>gi|118586288|ref|ZP_01543743.1| translational factor, SUA5 family [Oenococcus oeni ATCC BAA-1163]
gi|118433283|gb|EAV39994.1| translational factor, SUA5 family [Oenococcus oeni ATCC BAA-1163]
Length = 337
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 3/202 (1%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
LV +E EA + +G V+A PT+T+YG DA +AV +++ K R H +PL +
Sbjct: 3 LVLKTSEKAIAEAANIMASGGVVAFPTETVYGIGADATKRDAVEKVFAAKKRPHDNPLIV 62
Query: 78 CVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
V + RFA D L+++ PG +T++L + L ++ GL + R P +
Sbjct: 63 TVSNAEMAARFAKLDWRAEKLIENFWPGSLTMILPLIDQDILPDNVTAGLLTAAFRNPKN 122
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVV 196
+ R + L + + SANL+ +PS + + ++ R V D G G ST+V
Sbjct: 123 DVTRHLITLLNNPIVGPSANLSTKPSPTTAEHVLHDMDGRIDAVIDDGPTEIG-VESTIV 181
Query: 197 DLTRLGKFKILRPGSAKEETIA 218
DL+ + + ILRPG+ + ++
Sbjct: 182 DLS-VKQATILRPGAVTADQVS 202
>gi|296449033|ref|ZP_06890823.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium difficile NAP08]
gi|296879856|ref|ZP_06903829.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium difficile NAP07]
gi|296262126|gb|EFH08931.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium difficile NAP08]
gi|296429145|gb|EFH15019.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium difficile NAP07]
Length = 353
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 10/197 (5%)
Query: 26 HAEEAIQA--LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+ E IQA L+ GK + PT+T+YG +A AV +IYE KGR +PL + + +
Sbjct: 22 YEEIKIQAKLLREGKTVIFPTETVYGLGANALDENAVKKIYEAKGRPSDNPLIVHIYEKE 81
Query: 84 DINRFA--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
++ A ++D +++ L PGP+T++L++ + + S GL+++ +R+P + R
Sbjct: 82 EVYDLAKDISDK-AKLVIEKLWPGPITIILNKKDIIPYKTS--GGLDTVAIRMPSNIIAR 138
Query: 142 VIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
I + +A SAN++G+PS K +E + R + GG G STV+DLT
Sbjct: 139 AIIKEAGIPIAAPSANISGRPSPTKAKHVYEEMNGRVDGIVLGGDSNFGLE-STVLDLTE 197
Query: 201 LGKFKILRPGSAKEETI 217
ILRPGS +E +
Sbjct: 198 ETPM-ILRPGSITKEVL 213
>gi|406995621|gb|EKE14288.1| hypothetical protein ACD_12C00590G0002 [uncultured bacterium]
Length = 352
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 12/188 (6%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
E I LK+G ++ P+DT+YG CDA + +AV ++ E K R P+++ + IN+
Sbjct: 17 ETIVILKSGGLVIFPSDTVYGLLCDATNEQAVKKLIEFKNRPVGKPISVF-SNFELINQL 75
Query: 89 AVTDHLPHGLLDSLLPGPVTVVL-SRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ L +LPGP T++L S+ + S L L + ++G+R+P ++ V+
Sbjct: 76 VKISNQQLTTLKQILPGPFTLILPSKHKVSKL---LESEIGTLGIRIPMYRYIEVLVNRF 132
Query: 148 ESALALTSANLTGQPSSVSVKDF-----ENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ + TSANL GQ S + E + + D G LP + STVVDL++
Sbjct: 133 KKPITATSANLVGQSPHYSTEPLLKALTEKQKQLITLIVDAGKLPRNKP-STVVDLSQ-P 190
Query: 203 KFKILRPG 210
+ KILR G
Sbjct: 191 EVKILRQG 198
>gi|423080811|ref|ZP_17069428.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium difficile
002-P50-2011]
gi|423087212|ref|ZP_17075601.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium difficile
050-P50-2011]
gi|357545150|gb|EHJ27130.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium difficile
050-P50-2011]
gi|357552300|gb|EHJ34074.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium difficile
002-P50-2011]
Length = 353
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 10/197 (5%)
Query: 26 HAEEAIQA--LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+ E IQA L+ GK + PT+T+YG +A AV +IYE KGR +PL + + +
Sbjct: 22 YEEIKIQAKLLREGKTVIFPTETVYGLGANALDENAVKKIYEAKGRPSDNPLIVHIYEKK 81
Query: 84 DINRFA--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
++ A ++D +++ L PGP+T++L++ + + S GL+++ +R+P + R
Sbjct: 82 EVYDLAKNISDK-AKLVIEKLWPGPITIILNKKDIIPYKTS--GGLDTVAIRMPSNIIAR 138
Query: 142 VIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
I + +A SAN++G+PS K +E + R + GG G STV+DLT
Sbjct: 139 AIIKEAGIPIAAPSANISGRPSPTKAKHVYEEMNGRVDGIVLGGDSNFGLE-STVLDLTE 197
Query: 201 LGKFKILRPGSAKEETI 217
ILRPGS +E +
Sbjct: 198 ETPM-ILRPGSITKEVL 213
>gi|110680589|ref|YP_683596.1| Sua5/YciO/YrdC family protein [Roseobacter denitrificans OCh 114]
gi|109456705|gb|ABG32910.1| Sua5/YciO/YrdC family protein [Roseobacter denitrificans OCh 114]
Length = 314
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 92/190 (48%), Gaps = 4/190 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A L+TG ++A PT+T+YG DA + AV ++E KGR +PL + V D + RF
Sbjct: 18 QAADLLRTGALVAFPTETVYGLGADARNGRAVATVFEAKGRPSFNPLIVHVHDATQARRF 77
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
L + PGPV++VL E L + GL ++ +RVP R + R +
Sbjct: 78 CHWSDSAEKLATAFWPGPVSLVLPLREEHGLSSLVTAGLPTVALRVPAHPAARALLRAFD 137
Query: 149 SALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A SAN +G+ S + + E L + A + D G G ST+V L +L
Sbjct: 138 GPVAAPSANPSGKISPTTARHVAEGLGTKVAAILDDGPCSVGLE-STIVGLD--AAPCLL 194
Query: 208 RPGSAKEETI 217
RPG E I
Sbjct: 195 RPGGLPAEEI 204
>gi|306845031|ref|ZP_07477612.1| Sua5/YciO/YrdC/YwlC family protein [Brucella inopinata BO1]
gi|306274663|gb|EFM56452.1| Sua5/YciO/YrdC/YwlC family protein [Brucella inopinata BO1]
Length = 323
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 9/198 (4%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
A++ L+ G ++A+PT+T+YG A DA + E V I+ KGR +PL V ++ R+
Sbjct: 14 RAVEVLRRGGLVAIPTETVYGLAADAANGEGVAGIFAAKGRPQFNPLIAHVDGIAMAGRY 73
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNP----GLESIGVRVPDSNFVRVIA 144
D + L ++ PGP+T+VL E + ++ ++P GL ++ VR+P VR +
Sbjct: 74 VAFDPVSRRLAEAFWPGPLTIVLPLKERQDTDRPIHPLVTAGLSTLAVRMPHGR-VRDVI 132
Query: 145 RGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
L+S +A SAN +G+ S S +L R + D G G ST+V + +
Sbjct: 133 TALDSPVAAPSANTSGRISPTSAAAVAGDLGGRIDLILDAGPCDVG-VESTIVKVDG-DQ 190
Query: 204 FKILRPGS-AKEETIAIL 220
+LRPG A EE A L
Sbjct: 191 VHLLRPGGLAAEEIEAFL 208
>gi|339021956|ref|ZP_08645935.1| translation modulator Sua5/YciO/YrdC/YwlC [Acetobacter tropicalis
NBRC 101654]
gi|338751049|dbj|GAA09239.1| translation modulator Sua5/YciO/YrdC/YwlC [Acetobacter tropicalis
NBRC 101654]
Length = 325
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 95/199 (47%), Gaps = 4/199 (2%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
PAT + E A + L+ G ++A T+T+YG DA AV RI+E K R +PL
Sbjct: 6 PATPSGLETAARILREGGLVAFGTETVYGLGGDATQPAAVARIFEAKNRPRFNPLISHFA 65
Query: 81 DVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
V L L + PGP+T+VL R +S + GLES+ VRVP V
Sbjct: 66 TADAAFAQVVATPLARKLAQAFWPGPLTLVLPRARTSTICDLAADGLESLAVRVPKGECV 125
Query: 141 RVIARGLESALALTSANLTGQ--PSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDL 198
+ + + + +A SAN +G+ PS S E L R V D G G STV+DL
Sbjct: 126 QALLQAVNRPIAAPSANRSGRISPSDAS-HVLEELEGRIDAVLDSGPCSVGLE-STVLDL 183
Query: 199 TRLGKFKILRPGSAKEETI 217
T + +LRPG E +
Sbjct: 184 TAEDRPLLLRPGGIPAEAL 202
>gi|325847835|ref|ZP_08170057.1| Sua5/YciO/YrdC/YwlC family protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480853|gb|EGC83906.1| Sua5/YciO/YrdC/YwlC family protein [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 345
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 6/192 (3%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+ A + +K G ++A PT+T+YG D + EA +I++ K R +PL + + + ++
Sbjct: 19 KHAAKIIKNGDLVAFPTETVYGLGADGLNPEASRKIFKAKNRPEDNPLILHIDEDYKLDE 78
Query: 88 FA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
D L+ +L PGP+TV+L + SS + + G +++ VR P R +
Sbjct: 79 LVEKVDERTKFLIKNLWPGPLTVILKK--SSKIPDIITGGGDTVAVRRPKDKLAREFIKF 136
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+ +A SAN++G+PS + KD F ++ R + DGG G STV+D++ L
Sbjct: 137 CDRPIAAPSANISGRPSPTNAKDVFYDMNGRIPLIIDGGSSDIG-IESTVIDMS-LENPC 194
Query: 206 ILRPGSAKEETI 217
ILRPG E I
Sbjct: 195 ILRPGYYTYEYI 206
>gi|409722842|ref|ZP_11270236.1| Sua5/YciO/YrdC/YwlC family protein [Halococcus hamelinensis 100A6]
gi|448724584|ref|ZP_21707090.1| Sua5/YciO/YrdC/YwlC family protein [Halococcus hamelinensis 100A6]
gi|445785412|gb|EMA36203.1| Sua5/YciO/YrdC/YwlC family protein [Halococcus hamelinensis 100A6]
Length = 195
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 90/171 (52%), Gaps = 6/171 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A ++ K G ++ PT+T+YG DA S AV R++E+KGR P++ V V +
Sbjct: 9 AAESAKNGDLVVYPTETVYGLGADALSETAVERVFEVKGRPRDDPVSFGVASVERAAEYT 68
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+++ LPGPVTVV+ G + ++L G + +G+R+PD R + R
Sbjct: 69 RPTEREVEFMEAFLPGPVTVVVEAG--GAVPEALTAGRDRVGIRIPDHPVARDLLREA-G 125
Query: 150 ALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLT 199
L TSAN +G S+ +V + + ++ C V D G LP STVVD++
Sbjct: 126 PLTATSANRSGTGSARTVDEIDGSVRTACGAVLDVGELPGTE--STVVDVS 174
>gi|405979999|ref|ZP_11038340.1| Sua5/YciO/YrdC/YwlC family protein [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391374|gb|EJZ86438.1| Sua5/YciO/YrdC/YwlC family protein [Actinomyces turicensis
ACS-279-V-Col4]
Length = 219
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 109/207 (52%), Gaps = 13/207 (6%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA A+K+G++I +PTDT+YG CDA + +AV R+ +KGR P + V I
Sbjct: 18 KEAATAVKSGQLIVIPTDTVYGIGCDASNPDAVARVLAVKGRGRQMPPPVVVPGRESIET 77
Query: 88 FAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P + L D PG +T++L +L L +IGVR+P+ +R +
Sbjct: 78 LCI--DIPEAAYRLTDEYWPGGLTLILR--ARPDLGWDLGETGGTIGVRMPNEPRIRTLL 133
Query: 145 RGLESALALTSANLTGQPSSVSVKDFENLWERCACVY-DGGVLPSGRAGSTVVDLTRLGK 203
+ LALTSAN TG P + SV + + + +Y DGG P G ST++D T+ G
Sbjct: 134 DTV-GPLALTSANTTGNPPATSVGEAVDYFGTQVPLYVDGGPTP-GSTPSTILDFTK-GG 190
Query: 204 FKILRPGSAKEETIAILEKHSLVEEPA 230
+ +R G+ E +++ ++ EPA
Sbjct: 191 VRAIRLGTLSLEQLSLTAGTTI--EPA 215
>gi|408789822|ref|ZP_11201463.1| YrdC, Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Lactobacillus florum 2F]
gi|408520844|gb|EKK20866.1| YrdC, Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Lactobacillus florum 2F]
Length = 339
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 5/201 (2%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVT-D 92
L+ G+++A PT+T+YG DA ++ AV ++Y+ KGR +PL + V DV + ++A T
Sbjct: 18 LRAGELVAFPTETVYGLGADATNTAAVKKVYQAKGRPSDNPLIVHVADVETVTQYAATLT 77
Query: 93 HLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALA 152
L+D PGP+T++L + + L + + GL + R P + + L
Sbjct: 78 PTVKKLMDQFWPGPLTIIL-KLKPQALAEVVTGGLSTAAFRNPRQPLTNALIKAAGVPLV 136
Query: 153 LTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGS 211
SAN +G+PS + + +L + A + D G G STV+D++ ILRPG+
Sbjct: 137 GPSANTSGKPSPTTAAHVYHDLHGKIAGILDAGPTEVG-VESTVLDMSAKTP-TILRPGA 194
Query: 212 AKEETIAILEKHSLVEEPAAG 232
+ L L ++P G
Sbjct: 195 VTRADLLPLLGEVLEQQPLVG 215
>gi|297588759|ref|ZP_06947402.1| Sua5/YciO/YrdC/YwlC family protein [Finegoldia magna ATCC 53516]
gi|297574132|gb|EFH92853.1| Sua5/YciO/YrdC/YwlC family protein [Finegoldia magna ATCC 53516]
Length = 342
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD---VSD 84
E+A +K G V+A PT+T+YG + EA +I+++K RK +PL + V + V +
Sbjct: 18 EKAADLIKNGSVVAFPTETVYGLGANGLDEEACKKIFDVKRRKRDNPLILHVTNEEMVRN 77
Query: 85 INRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
++ D L+D+L PGP+T++ + + N ++ G ++ +R P R +
Sbjct: 78 LSSEITEDQ--KKLMDNLWPGPLTIIFKKSDKVN--DVVSCGGNTVAIRNPSDEIARFLI 133
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ +A SAN +G+PS + +D + ++ + DGG G STVVDLT
Sbjct: 134 DKSDCPIAAPSANKSGRPSPTNAQDVYSDMQGEIEMILDGGSCNIG-IESTVVDLTE-KP 191
Query: 204 FKILRPGSAKEETI 217
+ ILRPG +E +
Sbjct: 192 YTILRPGFYTKEDL 205
>gi|260685001|ref|YP_003216286.1| hypothetical protein CD196_3272 [Clostridium difficile CD196]
gi|260688659|ref|YP_003219793.1| hypothetical protein CDR20291_3318 [Clostridium difficile R20291]
gi|423090581|ref|ZP_17078870.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium difficile
70-100-2010]
gi|260211164|emb|CBA66618.1| conserved hypothetical protein [Clostridium difficile CD196]
gi|260214676|emb|CBE07311.1| conserved hypothetical protein [Clostridium difficile R20291]
gi|357556285|gb|EHJ37900.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium difficile
70-100-2010]
Length = 353
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 10/197 (5%)
Query: 26 HAEEAIQA--LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+ E IQA L+ GK + PT+T+YG +A AV +IYE KGR +PL + + +
Sbjct: 22 YEEIKIQAKLLREGKTVIFPTETVYGLGANALDENAVKKIYEAKGRPSDNPLIVHIYEKE 81
Query: 84 DINRFA--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
++ A ++D +++ L PGP+T++L++ + + S GL+++ +R+P + R
Sbjct: 82 EVYDLAKDISDK-AKLVIEKLWPGPITIILNKKDIIPYKTS--GGLDTVAIRMPSNVIAR 138
Query: 142 VIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
I + +A SAN++G+PS K +E + R + GG G STV+DLT
Sbjct: 139 AIIKEAGIPIAAPSANISGRPSPTKAKHVYEEMNGRVDGIVLGGDSNFGLE-STVLDLTE 197
Query: 201 LGKFKILRPGSAKEETI 217
ILRPGS +E +
Sbjct: 198 ETPM-ILRPGSITKEVL 213
>gi|254977106|ref|ZP_05273578.1| hypothetical protein CdifQC_17418 [Clostridium difficile QCD-66c26]
gi|255094434|ref|ZP_05323912.1| hypothetical protein CdifC_17521 [Clostridium difficile CIP 107932]
gi|255102691|ref|ZP_05331668.1| hypothetical protein CdifQCD-6_17911 [Clostridium difficile
QCD-63q42]
gi|255308512|ref|ZP_05352683.1| hypothetical protein CdifA_18121 [Clostridium difficile ATCC 43255]
gi|255316186|ref|ZP_05357769.1| hypothetical protein CdifQCD-7_17609 [Clostridium difficile
QCD-76w55]
gi|255518847|ref|ZP_05386523.1| hypothetical protein CdifQCD-_17148 [Clostridium difficile
QCD-97b34]
gi|255652026|ref|ZP_05398928.1| hypothetical protein CdifQCD_17710 [Clostridium difficile
QCD-37x79]
gi|306521768|ref|ZP_07408115.1| hypothetical protein CdifQ_20080 [Clostridium difficile QCD-32g58]
gi|384362675|ref|YP_006200527.1| hypothetical protein CDBI1_17030 [Clostridium difficile BI1]
gi|400927553|ref|YP_001090002.2| RNA-binding protein [Clostridium difficile 630]
gi|328887821|emb|CAJ70385.2| putative RNA-binding protein [Clostridium difficile 630]
Length = 346
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 10/197 (5%)
Query: 26 HAEEAIQA--LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
+ E IQA L+ GK + PT+T+YG +A AV +IYE KGR +PL + + +
Sbjct: 15 YEEIKIQAKLLREGKTVIFPTETVYGLGANALDENAVKKIYEAKGRPSDNPLIVHIYEKE 74
Query: 84 DINRFA--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
++ A ++D +++ L PGP+T++L++ + + S GL+++ +R+P + R
Sbjct: 75 EVYDLAKDISDK-AKLVIEKLWPGPITIILNKKDIIPYKTS--GGLDTVAIRMPSNVIAR 131
Query: 142 VIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTR 200
I + +A SAN++G+PS K +E + R + GG G STV+DLT
Sbjct: 132 AIIKEAGIPIAAPSANISGRPSPTKAKHVYEEMNGRVDGIVLGGDSNFGLE-STVLDLTE 190
Query: 201 LGKFKILRPGSAKEETI 217
ILRPGS +E +
Sbjct: 191 ETPM-ILRPGSITKEVL 206
>gi|410729144|ref|ZP_11367226.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium sp. Maddingley
MBC34-26]
gi|410596155|gb|EKQ50840.1| Sua5/YciO/YrdC/YwlC family protein [Clostridium sp. Maddingley
MBC34-26]
Length = 349
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 99/191 (51%), Gaps = 11/191 (5%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
E +EA + + G + PT+T+YG DA +SEAV +I++ KGR +PL I V
Sbjct: 15 EDKIKEAAEFIMNGGTVVFPTETVYGLGADALNSEAVKKIFKAKGRPQDNPLIIHVSS-K 73
Query: 84 DINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFV 140
+I +A +P L+D PGP+T++L + + + L+SIG+R+PD+
Sbjct: 74 NIELYA--REVPVVAKKLIDKFWPGPLTIILRK--KGIIPDVTSANLDSIGIRMPDNEIA 129
Query: 141 RVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLT 199
R + + +A SAN++G+PS + E+L + C+ GG ST+VD T
Sbjct: 130 RKLIELSNTTIAAPSANISGRPSPTDFQRCIEDLNSKVDCIL-GGAQSDIGVESTIVDCT 188
Query: 200 RLGKFKILRPG 210
+LRPG
Sbjct: 189 VYPPV-VLRPG 198
>gi|16801746|ref|NP_472014.1| hypothetical protein lin2685 [Listeria innocua Clip11262]
gi|16415221|emb|CAC97911.1| lin2685 [Listeria innocua Clip11262]
Length = 345
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A + L+ G+ +A PT+T+YG DA + A+ +IY KGR +PL + + +++
Sbjct: 19 QKAAELLQNGECVAFPTETVYGLGADATNQAAIQKIYAAKGRPSDNPLIVHIAKREQMDQ 78
Query: 88 FAVTDHLPHG--LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
F + + P L+++ PGP+TV+L + S L +++ GL ++GVR+P+ +
Sbjct: 79 F-IASYPPKALQLMEAFWPGPLTVILPLKKDS-LAANVSAGLSTVGVRMPEHPVSLELIA 136
Query: 146 GLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRA-GSTVVDLTRLGK 203
+A SAN +G+PS + + E+L A + DGG P+G STV+D + L
Sbjct: 137 TANIPIAAPSANRSGKPSPTTAEHVIEDLDGEIAGIIDGG--PTGVGLESTVIDCS-LDV 193
Query: 204 FKILRPGSAKEETI 217
ILRPG E I
Sbjct: 194 PIILRPGGITIEQI 207
>gi|115526373|ref|YP_783284.1| Sua5/YciO/YrdC/YwlC [Rhodopseudomonas palustris BisA53]
gi|115520320|gb|ABJ08304.1| translation factor SUA5 [Rhodopseudomonas palustris BisA53]
Length = 327
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 4/197 (2%)
Query: 22 ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
A+++ + A+ L G ++A PT+T+YG DA + AV R+Y+ KGR +PL V D
Sbjct: 12 ASDSAVDRAVACLIDGGLVAFPTETVYGLGADATQATAVARLYQAKGRPAFNPLIAHVAD 71
Query: 82 VSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVR 141
++ + D L + PGP+T+V+ + + + GL++I +R+P R
Sbjct: 72 LAAAQKIGRFDQNALRLAQAFWPGPLTLVVQKAAGCPVAELATAGLDTIAIRIPAHAVAR 131
Query: 142 VIARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTR 200
I RGL + SAN +G S + +L R + DGG + G ST+V
Sbjct: 132 AILRGLGRPVVAPSANRSGHVSPTTAAHVRGDLDGRIDLIVDGGPVTVG-VESTIVGC-- 188
Query: 201 LGKFKILRPGSAKEETI 217
K +LRPG + I
Sbjct: 189 FAKPVLLRPGGLPRQAI 205
>gi|404496457|ref|YP_006720563.1| tRNA (N6-threonylcarbamyl-A37) modification ATPase [Geobacter
metallireducens GS-15]
gi|418064817|ref|ZP_12702193.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter metallireducens RCH3]
gi|78194060|gb|ABB31827.1| tRNA (N6-threonylcarbamyl-A37) modification ATPase [Geobacter
metallireducens GS-15]
gi|373563090|gb|EHP89291.1| Sua5/YciO/YrdC/YwlC family protein [Geobacter metallireducens RCH3]
Length = 203
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 16/188 (8%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+ ++ LK G +IA PTDT YG C S + + RIY +K R+ P + D+S++ R+
Sbjct: 17 QVVKILKDGGIIAYPTDTTYGIGCSIFSKKGIERIYLLKQREKKKPFSFICSDLSEVARY 76
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A + + +L LPGP T VL +S + L +++G+R+PD+ + + L
Sbjct: 77 AKVSNYAYKMLKRHLPGPYTFVLD--ATSIVPDLLVTKQKTVGIRIPDNRICLSLVKELG 134
Query: 149 SALALTSANLTGQ-----PSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ TSANL+G+ P V + N+ ++ V DGG+L + S+VV L +G
Sbjct: 135 HPIITTSANLSGEEPIGDPYLVDL----NMGKQLDVVVDGGILSADV--SSVVSL--IGD 186
Query: 204 F-KILRPG 210
+ ++LR G
Sbjct: 187 YPQVLRQG 194
>gi|169824779|ref|YP_001692390.1| translation factor [Finegoldia magna ATCC 29328]
gi|167831584|dbj|BAG08500.1| translation factor [Finegoldia magna ATCC 29328]
Length = 342
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD---VSD 84
E+A + +K G V+A PT+T+YG + EA +I+++K RK +PL + V + V +
Sbjct: 18 EKAAELIKNGSVVAFPTETVYGLGANGLDEEACKKIFDVKRRKRDNPLILHVTNEDMVKN 77
Query: 85 INRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
++ D L+D+L PGP+T++ + + N ++ G +++ +R P R +
Sbjct: 78 LSSEITEDQ--KKLMDNLWPGPLTIIFKKSDKVN--DVVSCGGDTVAIRNPSDEIARFLI 133
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS + +D + ++ + DGG G STVVDLT
Sbjct: 134 DKSGCPIAAPSANKSGRPSPTNAQDVYSDMQGEIEMILDGGSCNIG-IESTVVDLTE-KP 191
Query: 204 FKILRPGSAKEETI 217
+ ILRPG +E +
Sbjct: 192 YTILRPGFYTKEDL 205
>gi|317471145|ref|ZP_07930516.1| Sua5/YciO/YrdC/YwlC family protein [Anaerostipes sp. 3_2_56FAA]
gi|316901360|gb|EFV23303.1| Sua5/YciO/YrdC/YwlC family protein [Anaerostipes sp. 3_2_56FAA]
Length = 351
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA L+ GK++A PT+T+YG EA +RIYE KGR +PL + +G + I+
Sbjct: 22 EAAGLLREGKLVAFPTETVYGLGGSGWMEEAASRIYEAKGRPSDNPLILHIGSMEMIDE- 80
Query: 89 AVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
+T +P +D+ PGP+TV+L + S + + GL+S+ VR+P + R
Sbjct: 81 -ITSCVPGPAKKAMDAFWPGPLTVILPK--SDKVPYRVTGGLDSVAVRMPSHPAALALLR 137
Query: 146 GLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
+A SAN +G+PS + E+L + V DGG + G ST+VD T G+
Sbjct: 138 EAGVPVAAPSANTSGRPSPTKAEHVVEDLDGKIPMVLDGGKVEVG-VESTIVDFT--GEV 194
Query: 205 K-ILRPGSAKEETI 217
ILRPG ++ +
Sbjct: 195 PVILRPGKITKDEL 208
>gi|325568365|ref|ZP_08144732.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus casseliflavus ATCC
12755]
gi|325158134|gb|EGC70287.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus casseliflavus ATCC
12755]
Length = 342
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 6/209 (2%)
Query: 24 EAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVS 83
++ EA L G ++A PT+T+YG A AV ++Y++KGR +PL + + +
Sbjct: 8 QSQLNEAAAILAEGGLVAFPTETVYGLGASALLPNAVAQVYQVKGRPSDNPLIVHIAEPE 67
Query: 84 DINRFAVTDH-LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ F H L+++ PGP+T++ S + S L + GL + R+P++
Sbjct: 68 QLEPFVDNKHPFADKLMETFWPGPLTLIFSIKKDS-LPSIVTGGLSTAAFRMPNNTKTLA 126
Query: 143 IARGLESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTR- 200
+ + + L SAN +G+PS S + +L + A + D GV G STV+DL+
Sbjct: 127 LIKQAQQPLVGPSANTSGKPSPTSAAHVQHDLAGKIAGILDDGVTQIG-VESTVLDLSDP 185
Query: 201 LGKFKILRPGS-AKEETIAILEKHSLVEE 228
ILRPG+ +KE+ A+L+ LV++
Sbjct: 186 TAPPIILRPGAISKEQLEAVLQTKVLVDQ 214
>gi|227514469|ref|ZP_03944518.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus fermentum ATCC
14931]
gi|227087155|gb|EEI22467.1| Sua5/YciO/YrdC/YwlC family protein [Lactobacillus fermentum ATCC
14931]
Length = 343
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 16/209 (7%)
Query: 15 KAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSP 74
K + +PA A + IQA G+++A PT+T+YG DA + EAV ++Y KGR +P
Sbjct: 3 KTVIFQPAEVKQAAKLIQA---GQLVAFPTETVYGLGADATNEEAVKQVYLAKGRPSDNP 59
Query: 75 LAICVGDVSDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIG 131
L + V ++ + FA +P L+D PG +T++L R + L K++ GL+++
Sbjct: 60 LIVHVSSLAMVEHFAA--EIPAKAKQLMDRFWPGSLTIIL-RVKPGTLSKTVTGGLDTVA 116
Query: 132 VRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGR 190
R PD + + + SAN +G+PS + + +L + A + D G P+ R
Sbjct: 117 FRFPDCQPTLDLISQVGVPIVGPSANTSGKPSPTTANHVYHDLNNKIAGIIDNG--PT-R 173
Query: 191 AG--STVVDLTRLGKFKILRPGSAKEETI 217
G STV+D++ + ILRPG+ ++ I
Sbjct: 174 VGVESTVLDMST-SQPVILRPGAVTKQDI 201
>gi|171696344|ref|XP_001913096.1| hypothetical protein [Podospora anserina S mat+]
gi|170948414|emb|CAP60578.1| unnamed protein product [Podospora anserina S mat+]
Length = 413
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Query: 40 IAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPHGLL 99
+A PT+T+YG DA SS AV IY KGR +PL + V D+S ++ + + H L+
Sbjct: 69 VAFPTETVYGLGADATSSTAVKGIYTAKGRPSDNPLIVHVSDLSMLSTLSTIPEIYHELI 128
Query: 100 DSLLPGPVTVVLSRGESSN-LEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSANL 158
PGP+T++L S L + GL + G R+PDS R + + + LA SAN
Sbjct: 129 SKFWPGPLTILLPVPTSGQLLAPEVTAGLTTFGARMPDSPLARALIQLVGKPLAAPSANA 188
Query: 159 TGQPSSV-SVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEETI 217
+ +PS +V E+L + + DGG G STVVD +LRPG E I
Sbjct: 189 STRPSPTKAVHVLEDLEGKIELILDGGDCAVG-VESTVVD-GLCNPPVVLRPGGVGIEEI 246
>gi|402565608|ref|YP_006614953.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia cepacia GG4]
gi|402246805|gb|AFQ47259.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia cepacia GG4]
Length = 342
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T A + A L G+++A PT+T+YG DA + EAV RIY KGR P+ + +
Sbjct: 10 TPAQIDAAAALLDVGQLVAFPTETVYGLGGDAANPEAVARIYAAKGRPANHPVIVHLPPG 69
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
D +A D LP L+D+ PGP+T++L R + + +++ G +S+G+R P
Sbjct: 70 GDPGYWA--DDLPADALALIDAFWPGPLTLILKR--HARIPDAVSGGQDSVGLRCPSHPV 125
Query: 140 VRVI------ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGS 193
+ + RG +A SAN G S + + + + V DGG G S
Sbjct: 126 AQALLAAFSARRGGHGGVAAPSANRFGHVSPTTAQHVRDEFGDTVHVLDGGASEVG-IES 184
Query: 194 TVVDLTRLGKFKILRPGSAKEETIA 218
T++DL+R G +LRPG + IA
Sbjct: 185 TILDLSR-GFPALLRPGHVTPQQIA 208
>gi|407977833|ref|ZP_11158669.1| hypothetical protein BA1_01490 [Bacillus sp. HYC-10]
gi|407415695|gb|EKF37283.1| hypothetical protein BA1_01490 [Bacillus sp. HYC-10]
Length = 350
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 103/192 (53%), Gaps = 5/192 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
++A L+ +V+A PT+T+YG +A +EAV +IYE KGR +PL + + +V ++
Sbjct: 23 KQAALLLQQNEVVAFPTETVYGLGANAKETEAVKKIYEAKGRPSDNPLIVHIAEVQQLHE 82
Query: 88 FA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
FA + + L+D+ PG +T+VL + L K + GL ++GVR+PD + R
Sbjct: 83 FAQIENEKVKTLMDAFWPGALTLVLP-CKPGILSKQVTAGLSTVGVRMPDHPVALELIRA 141
Query: 147 LESALALTSANLTGQPS-SVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN +G+PS +++ +L R A + DGG G + V + +
Sbjct: 142 AGLPIAAPSANRSGKPSPTLADHVASDLDGRIAGIVDGGSTGIGVESTVVSCIDEIP--V 199
Query: 206 ILRPGSAKEETI 217
ILRPG +E +
Sbjct: 200 ILRPGGITKEAL 211
>gi|328957993|ref|YP_004375379.1| putative ribosome maturation factor; RNA binding protein
[Carnobacterium sp. 17-4]
gi|328674317|gb|AEB30363.1| putative ribosome maturation factor; RNA binding protein
[Carnobacterium sp. 17-4]
Length = 329
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 100/191 (52%), Gaps = 4/191 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A Q ++ G++I+ PT+T+YG DA + AV ++Y KGR +PL + V + ++ ++
Sbjct: 3 KAAQKIQQGELISFPTETVYGLGADATNEAAVKKVYSAKGRPSDNPLIVHVSTIEEVEQY 62
Query: 89 AV-TDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ L+ + PGP+T++ + + ++ GL S+ +R+PD+ + R
Sbjct: 63 VQEVPEVAKKLMQTFWPGPLTLIF-KVKDHVFAPTVTAGLASVAMRMPDNEVTLQLIRKS 121
Query: 148 ESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
L SAN +G+PS + + +L + A V D G G STV+D+T I
Sbjct: 122 GKPLVGPSANTSGKPSPTTADHVYHDLKGKIAGVLDDGDTGLGLE-STVLDITDPKLPTI 180
Query: 207 LRPGSAKEETI 217
LRPG+ +E +
Sbjct: 181 LRPGATTKEAL 191
>gi|336425993|ref|ZP_08606007.1| hypothetical protein HMPREF0994_02013 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336011458|gb|EGN41418.1| hypothetical protein HMPREF0994_02013 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 349
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 22 ATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD 81
A E A LK G ++A PT+T+YG DA + ++ +IYE KGR +PL + +
Sbjct: 13 ADEEQIRRAGDILKAGGLVAFPTETVYGLGGDALNPDSSKKIYEAKGRPSDNPLIVHICR 72
Query: 82 VSDINRFA--VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
DI R A VT+ + L ++ PGP+T++L + ++ + K GL+++ +R P
Sbjct: 73 WEDIYRIAEPVTEEVER-LAEAFWPGPLTMILQKKDT--VPKETTGGLDTVAIRFPSHPV 129
Query: 140 VRVIARGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDL 198
R + +A SAN +G+PS + E++ R + DGG + G ST+VD+
Sbjct: 130 ARRLIEAAGGFVAAPSANASGRPSPTMAEYVAEDMNGRIEMILDGGAVGIGLE-STIVDV 188
Query: 199 TRLGKFKILRPGSAKEETIAILEK 222
+ ILRPG +E +LEK
Sbjct: 189 SGPEPI-ILRPGYVTQE---MLEK 208
>gi|420262970|ref|ZP_14765610.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus sp. C1]
gi|394769934|gb|EJF49752.1| Sua5/YciO/YrdC/YwlC family protein [Enterococcus sp. C1]
Length = 342
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 107/204 (52%), Gaps = 6/204 (2%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA L G ++A PT+T+YG A +AV ++Y++KGR +PL + + + + F
Sbjct: 13 EAAAILAEGGLVAFPTETVYGLGASALLPKAVAQVYQVKGRPSDNPLIVHIAEPEQLEPF 72
Query: 89 AVTDH-LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
H L+++ PGP+T++ S + S L + GL + R+P++ + +
Sbjct: 73 VDNKHPFADKLMETFWPGPLTLIFSIKKDS-LPSIVTGGLSTAAFRMPNNTKTLALIKQA 131
Query: 148 ESALALTSANLTGQPSSVSVKDFE-NLWERCACVYDGGVLPSGRAGSTVVDLTR-LGKFK 205
+ L SAN +G+PS S + +L + A + D GV G STV+DL+
Sbjct: 132 QQPLVGPSANTSGKPSPTSAAHVQHDLAGKIAGILDDGVTQIG-VESTVLDLSDPTAPPI 190
Query: 206 ILRPGS-AKEETIAILEKHSLVEE 228
ILRPG+ +KE+ A+L+ LV++
Sbjct: 191 ILRPGAISKEQLEAVLQTKVLVDQ 214
>gi|296111567|ref|YP_003621949.1| SUA5 family translation factor () [Leuconostoc kimchii IMSNU 11154]
gi|339491164|ref|YP_004705669.1| SUA5 family translation factor [Leuconostoc sp. C2]
gi|295833099|gb|ADG40980.1| SUA5 family translation factor (putative) [Leuconostoc kimchii
IMSNU 11154]
gi|338852836|gb|AEJ31046.1| SUA5 family translation factor (putative) [Leuconostoc sp. C2]
Length = 337
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 98/187 (52%), Gaps = 8/187 (4%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
LK G+V+A PT+T+YG DA + AV +++ KGR +PL + V DVS + +
Sbjct: 20 LKAGEVVAFPTETVYGLGADATNDLAVKKVFTAKGRPADNPLIMTVADVSQLEAYVTISE 79
Query: 94 LPHGLLDSLLPGPVTVVLS--RGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESAL 151
L+ PG +T++L G+ S L + GL+++ R+P ++ R + R L
Sbjct: 80 AAQKLMTQFWPGSLTIILPIITGQVSML---VTGGLQTVAFRLPANDVTRELIRMTGVPL 136
Query: 152 ALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPG 210
SANL+G+PS + + + ++ + + + D G G STVVD++ ILRPG
Sbjct: 137 VGPSANLSGKPSPTTAQHVWHDMQGKISGIVDDGPTMVG-VESTVVDMSA-AVPTILRPG 194
Query: 211 SAKEETI 217
+ + +
Sbjct: 195 AVTQNQL 201
>gi|448467547|ref|ZP_21599559.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum kocurii JCM 14978]
gi|445812423|gb|EMA62417.1| Sua5/YciO/YrdC/YwlC family protein [Halorubrum kocurii JCM 14978]
Length = 201
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 6/169 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A +A+ G ++ PT+T+YG DA AV R++E+KGR+ ++PL++ V V R+
Sbjct: 11 AAEAVAEGGLVVYPTETVYGLGGDALDPAAVERVFELKGRERSNPLSLGVPSVDAALRYT 70
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ LPGPVTVV+ RG+ + +L G + +G+RVPD R + R
Sbjct: 71 EPTEFAVAFARAFLPGPVTVVVDRGDM--VPDALTGGRDRVGIRVPDHPIARDLLRET-G 127
Query: 150 ALALTSANLTGQPSSVSVKDFEN-LWERCACVYDGGVLPSGRAGSTVVD 197
L TSAN++G S D ++ + E A V D G P STVVD
Sbjct: 128 PLTATSANVSGCGSVTHPDDLDDRIREGVAAVIDDGETPGTE--STVVD 174
>gi|385808631|ref|YP_005845027.1| SUA5-like translation factor [Ignavibacterium album JCM 16511]
gi|383800679|gb|AFH47759.1| Putative SUA5-like translation factor [Ignavibacterium album JCM
16511]
Length = 314
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 101/191 (52%), Gaps = 5/191 (2%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A + ++ GK++A PT+T+YG +A AV++I+E+K R PL + + + +
Sbjct: 4 EKAAEYIRNGKLVAFPTETVYGLGANALDPFAVSKIFELKERPAFDPLIVHIESIESAEQ 63
Query: 88 FAVT-DHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A T ++ H L + PGP+T+VL + + + + GL+++G+R+P+ + +
Sbjct: 64 LADTKNNKFHRLAEKFWPGPLTIVLPKKKI--IPDIVTSGLDTVGLRMPNHKIALELIKL 121
Query: 147 LESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKI 206
+A SAN G+ S S + + + + C+ DGG G STV+ L F+I
Sbjct: 122 SGCPIAAPSANKFGRVSPTSAQHVKKYFPQIDCIIDGGKTQVG-IESTVIYLYE-DSFEI 179
Query: 207 LRPGSAKEETI 217
LRPG E I
Sbjct: 180 LRPGIITSEEI 190
>gi|448315850|ref|ZP_21505489.1| Sua5/YciO/YrdC/YwlC family protein [Natronococcus jeotgali DSM
18795]
gi|445610609|gb|ELY64379.1| Sua5/YciO/YrdC/YwlC family protein [Natronococcus jeotgali DSM
18795]
Length = 194
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E A A+++G+++ PT+T+YG +A ++AV R++E KGR + P+++ V V
Sbjct: 5 ESAAAAIRSGELVVYPTETVYGLGANAVDADAVERVFEAKGRDRSKPISMAVPSVPAAFE 64
Query: 88 FAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGL 147
+ + + LPGPVTV+ R E+ + L G + +G+RVPD +
Sbjct: 65 YVRASSREREFMAAFLPGPVTVLCRRREA--VPDVLTSGRDRVGIRVPDHPLALRLCERA 122
Query: 148 ESALALTSANLTGQPSSVSVKDFEN--LWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+ + TSAN +G SV D + ER A V DGG P STVVD++
Sbjct: 123 GTPITATSANESGS-GSVRRPDALDPAFRERVAAVVDGGETPG--TESTVVDVS---SGT 176
Query: 206 ILRPGSAKEETIAILEKH 223
I R G +E LE H
Sbjct: 177 IHRRGVRADEIERWLESH 194
>gi|417926427|ref|ZP_12569826.1| Sua5/YciO/YrdC/YwlC family protein [Finegoldia magna
SY403409CC001050417]
gi|341589277|gb|EGS32559.1| Sua5/YciO/YrdC/YwlC family protein [Finegoldia magna
SY403409CC001050417]
Length = 342
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGD---VSD 84
E+A + +K G V+A PT+T+YG + EA +I+++K RK +PL + V + V +
Sbjct: 18 EKAAELIKNGSVVAFPTETVYGLGANGLDEEACKKIFDVKRRKRDNPLILHVTNEDMVKN 77
Query: 85 INRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
++ D L+D+L PGP+T++ + + N ++ G +++ +R P R +
Sbjct: 78 LSSEITEDQ--KKLMDNLWPGPLTIIFKKSDKVN--DVVSCGGDTVAIRNPSDEIARFLI 133
Query: 145 RGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+A SAN +G+PS + +D + ++ + DGG G STVVDLT
Sbjct: 134 DESGCPIAAPSANKSGRPSPTNAQDVYSDMQGEIEMILDGGSCNIG-IESTVVDLTE-KP 191
Query: 204 FKILRPGSAKEETI 217
+ ILRPG +E +
Sbjct: 192 YTILRPGFYTKEDL 205
>gi|421185631|ref|ZP_15643030.1| translation factor SUA5 [Oenococcus oeni AWRIB418]
gi|399968894|gb|EJO03325.1| translation factor SUA5 [Oenococcus oeni AWRIB418]
Length = 337
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 4/207 (1%)
Query: 18 LVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAI 77
LV +E EA + +G V+A PT+T+YG DA +AV +++ K R H +PL +
Sbjct: 3 LVLKTSEKAIAEAANIMASGGVVAFPTETVYGIGADATKRDAVEKVFAAKKRPHDNPLIV 62
Query: 78 CVGDVSDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
V + RFA D L+ + PG +T++L + L ++ GL + R P +
Sbjct: 63 TVSNAEMAARFAKLDWRAEKLIKNFWPGSLTMILPLIDQDILPDNVTAGLLTAAFRNPKN 122
Query: 138 NFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVV 196
+ R + L + + SANL+ +PS + + ++ R V D G G ST+V
Sbjct: 123 DVTRHLITLLNNPIVGPSANLSTKPSPTTAEHVLHDMDGRIDAVIDDGPTEIG-VESTIV 181
Query: 197 DLTRLGKFKILRPGSAKEETI-AILEK 222
DL+ + + ILRPG+ + + ++LE+
Sbjct: 182 DLS-VKQATILRPGAVTADQVSSVLEE 207
>gi|399576011|ref|ZP_10769768.1| hypothetical protein HSB1_18070 [Halogranum salarium B-1]
gi|399238722|gb|EJN59649.1| hypothetical protein HSB1_18070 [Halogranum salarium B-1]
Length = 194
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 6/169 (3%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A A+ G+ + PT+T+YG DA ++AV ++E+KGR +PL++ V DV ++
Sbjct: 8 AADAVARGEAVVYPTETVYGLGADALDADAVEGVFELKGRSLDNPLSLGVPDVDTALQYT 67
Query: 90 VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLES 149
+ LPGPVTVV+ R + + L G +G+R+PD + V + G
Sbjct: 68 APTPTEEAFMREFLPGPVTVVVER--RTMVPDVLTSGKSRVGIRIPDHD-VALELLGETG 124
Query: 150 ALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVD 197
L TSAN++G PS ++D E + V DGG P STVVD
Sbjct: 125 PLTATSANVSGSPSVTRLEDLDERIRTGAGAVVDGGETPGTE--STVVD 171
>gi|404255175|ref|ZP_10959143.1| hypothetical protein SPAM266_18220 [Sphingomonas sp. PAMC 26621]
Length = 357
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 90/183 (49%), Gaps = 7/183 (3%)
Query: 37 GKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDHLPH 96
G+ +A+P++T+YG A DA S AV RIY KGR +PL + V D++ R AV D
Sbjct: 31 GQPVAIPSETVYGLAADATDSGAVARIYAAKGRPSFNPLIVHVLDLAAAERIAVFDATAR 90
Query: 97 GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALALTSA 156
L + PGP+T+VL + + GL++I +RVP +R + LA SA
Sbjct: 91 ALAAAFWPGPLTLVLPVRPDGGIASLVTAGLDTIAIRVPAHRAMRALIAAAGVPLAAPSA 150
Query: 157 NLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSAKEE 215
N +G S +L R A V D G +G V+ T + ++LRPG E
Sbjct: 151 NASGAISPTRAAHVVASLGGRIALVVDDGATAAG------VESTIIAGLQVLRPGPVTAE 204
Query: 216 TIA 218
+A
Sbjct: 205 DLA 207
>gi|385812051|ref|YP_005848442.1| hypothetical protein LC40_0304 [Lactobacillus fermentum CECT 5716]
gi|299782950|gb|ADJ40948.1| Putative uncharacterized protein [Lactobacillus fermentum CECT
5716]
Length = 343
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 16/209 (7%)
Query: 15 KAGLVRPATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSP 74
K + +PA A + IQA G+++A PT+T+YG DA + EAV ++Y KGR +P
Sbjct: 3 KTVIFQPAEVKQAAKLIQA---GQLVAFPTETVYGLGADATNEEAVKQVYLAKGRPSDNP 59
Query: 75 LAICVGDVSDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIG 131
L + V ++ + FA +P L+D PG +T++L R + L K++ GL+++
Sbjct: 60 LIVHVSSLAMVEHFAA--EIPAKAKQLMDRFWPGSLTIIL-RVKPGTLSKTVTGGLDTVA 116
Query: 132 VRVPDSNFVRVIARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGR 190
R PD + + SAN +G+PS + + +L + A + D G P+ R
Sbjct: 117 FRFPDCQTTLDLISQAGVPIVGPSANTSGKPSPTTANHVYHDLNNKIAGIIDNG--PT-R 173
Query: 191 AG--STVVDLTRLGKFKILRPGSAKEETI 217
G STV+D++ + ILRPG+ ++ I
Sbjct: 174 VGVESTVLDMST-SQPVILRPGAVTKQDI 201
>gi|398305181|ref|ZP_10508767.1| ribosome maturation factor; RNA binding protein [Bacillus
vallismortis DV1-F-3]
Length = 346
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 11/194 (5%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+A L+ +V+A PT+T+YG +A ++AV +IYE KGR +PL + + D++ ++
Sbjct: 23 QAAALLRQNEVVAFPTETVYGLGANAKDTDAVKKIYEAKGRPSDNPLIVHIADITQLDDL 82
Query: 89 AVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
T P L++ PG +T++L + L + GLE++ +R+PD + R
Sbjct: 83 --TGPAPGKAKTLMNRFWPGALTLILP-CKPDALSPRVTAGLETVAIRMPDHPLALALIR 139
Query: 146 GLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKF 204
E +A SANL+G+PS + +L R A + DGG P+G + V L+ G
Sbjct: 140 ASELPIAAPSANLSGKPSPTKAEHVAHDLDGRIAGIMDGG--PTGIGVESTV-LSCAGDI 196
Query: 205 KI-LRPGSAKEETI 217
+ LRPG +E I
Sbjct: 197 PVLLRPGGITKEQI 210
>gi|323137611|ref|ZP_08072688.1| Sua5/YciO/YrdC/YwlC family protein [Methylocystis sp. ATCC 49242]
gi|322397237|gb|EFX99761.1| Sua5/YciO/YrdC/YwlC family protein [Methylocystis sp. ATCC 49242]
Length = 321
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 92/185 (49%), Gaps = 3/185 (1%)
Query: 34 LKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFAVTDH 93
L+ G ++A PT+T+YG DA ++ AV RIY+ KGR +PL + D+ R A+
Sbjct: 19 LREGGLVAFPTETVYGLGADATNAWAVARIYDAKGRPSFNPLIAHIADIESARREALLPE 78
Query: 94 LPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLESALAL 153
L ++ PGP+T+V ++ + GL S+ +R+PD + + L +A
Sbjct: 79 AALRLAEAFWPGPLTIVAPVAPGGSVCELARAGLPSVALRIPDHPVAQALIAALGRPIAA 138
Query: 154 TSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKILRPGSA 212
SAN +G S V+ E+L R + DGG +G ST+V +LRPG+
Sbjct: 139 PSANRSGHVSPVTAAHVAEDLSGRVEMILDGGRTTAGLE-STIVSFCEATPI-LLRPGAI 196
Query: 213 KEETI 217
E I
Sbjct: 197 SREAI 201
>gi|222529067|ref|YP_002572949.1| Sua5/YciO/YrdC/YwlC family protein [Caldicellulosiruptor bescii DSM
6725]
gi|222455914|gb|ACM60176.1| Sua5/YciO/YrdC/YwlC family protein [Caldicellulosiruptor bescii DSM
6725]
Length = 348
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 10/211 (4%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
E+A L+ G ++A PT+T+YG +A +AV++I+ KGR +PL + + +
Sbjct: 17 EKAALILREGGLVAFPTETVYGLGANALLKDAVDKIFLAKGRPQDNPLIVHISSKDMLEM 76
Query: 88 FA-VTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
A +TD + L++ PGP+T+VL + + + +++ GL ++GVR+P + + R
Sbjct: 77 CAEITDDRVYMLIEMFWPGPLTIVLPK--KNVIAENVTAGLSTVGVRMPANKIALELIRL 134
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN++G+PS K E+L + + DGG G STVVDL+ K
Sbjct: 135 SGVPVAAPSANVSGKPSPTEAKHVIEDLMGKVDVIIDGGKCSFGLE-STVVDLSG-EKAV 192
Query: 206 ILRPGS----AKEETIAILEKHSLVEEPAAG 232
ILRPG+ A +E ++ +E V E G
Sbjct: 193 ILRPGAISYFALKEVLSDIEYSKAVVEGLTG 223
>gi|424780168|ref|ZP_18207048.1| YrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Catellicoccus marimammalium
M35/04/3]
gi|422843126|gb|EKU27567.1| YrdC/Sua5 family protein, required for threonylcarbamoyladenosine
(t(6)A) formation in tRNA [Catellicoccus marimammalium
M35/04/3]
Length = 336
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 18/213 (8%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T+ ++A + LK G+V+A PT+T+YG A + AV ++Y KGR +PL + +
Sbjct: 7 TKESIDQAAEQLKNGEVVAFPTETVYGLGACAENEAAVKKVYLAKGRPSDNPLIVHIAKP 66
Query: 83 SDINRFAVTDHL---PHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
DI + TD L+D+ PGP+T++L ++ L K++ GL++ R+PD
Sbjct: 67 EDI--LSYTDDFSLVTKTLMDTFWPGPLTIILPL-KNQRLSKTVTGGLDTCAFRMPDKAL 123
Query: 140 VRVIARGLESALALT--SANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVV 196
+ LE L SAN +G+PS + + +L + + DGG G STV+
Sbjct: 124 TLQL---LEKTGPLVGPSANTSGKPSPTTFDHVYHDLAGKVTGILDGGECQVG-VESTVI 179
Query: 197 DLTRLGKFKILRPGSAKEETIAILEKHSLVEEP 229
DL+ + ILRPG I + E +V+ P
Sbjct: 180 DLSNEEEIVILRPGK-----IGVEELQQVVDVP 207
>gi|326692968|ref|ZP_08229973.1| putative translation factor [Leuconostoc argentinum KCTC 3773]
Length = 335
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
T ++A LK G+V+A PT+T+YG DA + AV +++ K R +PL + V DV
Sbjct: 7 TTQDVQQAGALLKAGEVVAFPTETVYGLGADATNDAAVKKVFLAKNRPADNPLIMTVADV 66
Query: 83 SDINRFAVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRV 142
+ F L+ + PG +T+++ + + + GL+++ R+P + R
Sbjct: 67 EQLTPFVTISEAARQLMTAFWPGSLTIIMPI-KPDQVSMLVTGGLQTVAFRLPANETARA 125
Query: 143 IARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRL 201
+ R + SAN +G+PS + + + ++ R A + D G G STV+D++
Sbjct: 126 VIRAAGVPIVGPSANTSGKPSPTTAQHVWHDMQGRIAAIVDDGPTEVG-VESTVIDMST- 183
Query: 202 GKFKILRPGSAKEETI-AILEK 222
ILRPG+ ++ + A+L++
Sbjct: 184 DTPTILRPGAVTQQQLEAVLQQ 205
>gi|300705060|ref|YP_003746663.1| hypothetical protein RCFBP_20897 [Ralstonia solanacearum CFBP2957]
gi|299072724|emb|CBJ44077.1| conserved protein of unknown function, translation factor domain,
SUA5 type [Ralstonia solanacearum CFBP2957]
Length = 336
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 110/205 (53%), Gaps = 16/205 (7%)
Query: 23 TEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDV 82
+ A +EA + L+ G+++A PT+T+YG DA + +A+ RIY +KGR P+ + V D
Sbjct: 12 SAARLDEAARRLEAGELVAFPTETVYGLGADAENPQAIARIYALKGRPSNHPVIVHVVDG 71
Query: 83 SDINRFAVTDHLPH---GLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNF 139
+D+ +A D LP L+++ PGP+T++L R + ++ ++ G +SIG+R P
Sbjct: 72 ADLTYWA--DDLPGIALQLVEAFWPGPLTLILKR--APHIPAAVAGGQDSIGLRCPSHPV 127
Query: 140 VRVI----ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTV 195
+ + RG +A SAN GQ S + + + V +G + G ST+
Sbjct: 128 AQALLSRFKRG-RGGIAAPSANKFGQVSPTTAQHVREEFGEAVFVLEGDGVDVG-IESTI 185
Query: 196 VDLTRLGKF---KILRPGSAKEETI 217
VDL+RL + +LRPG+ E I
Sbjct: 186 VDLSRLDQGIGPVLLRPGAITPEDI 210
>gi|154505651|ref|ZP_02042389.1| hypothetical protein RUMGNA_03190 [Ruminococcus gnavus ATCC 29149]
gi|336431819|ref|ZP_08611661.1| hypothetical protein HMPREF0991_00780 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153794090|gb|EDN76510.1| Sua5/YciO/YrdC/YwlC family protein [Ruminococcus gnavus ATCC 29149]
gi|336019838|gb|EGN49560.1| hypothetical protein HMPREF0991_00780 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 523
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 102/190 (53%), Gaps = 16/190 (8%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA + L+ G ++A PT+T+YG +A EA + YE KGR +PL + + D+ D++
Sbjct: 33 EAGEILREGGLVAFPTETVYGLGANALDEEAAKKTYEAKGRPSDNPLIVHIADLEDLSE- 91
Query: 89 AVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIAR 145
+T+++P L PGP+T++ + SS + GL+++ VR+P R +
Sbjct: 92 -ITENVPPETELLAKHFWPGPLTMIFEK--SSLVPYGTTGGLDTVAVRMPSDLIARKLIL 148
Query: 146 GLESALALTSANLTGQPSSVSVKDFENLWE----RCACVYDGGVLPSGRAGSTVVDLTRL 201
++ SAN +G+PS + E++WE + + DGG + G ST++D+T +
Sbjct: 149 AAGGYVSAPSANTSGRPSPTTA---EHVWEDLNGKIEMIIDGGSVDIGLE-STILDMT-V 203
Query: 202 GKFKILRPGS 211
ILRPG+
Sbjct: 204 SPPMILRPGA 213
>gi|302390585|ref|YP_003826406.1| translation factor SUA5 [Thermosediminibacter oceani DSM 16646]
gi|302201213|gb|ADL08783.1| translation factor SUA5 [Thermosediminibacter oceani DSM 16646]
Length = 343
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 13/202 (6%)
Query: 30 AIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRFA 89
A + +K G ++A PT+T+YG +A +A +IY+ K R +PL + + ++++ A
Sbjct: 17 AARVIKNGGLVAFPTETVYGLGANALDEKAAFKIYQAKKRPQDNPLIVHIHSPGELDKLA 76
Query: 90 VTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARG 146
++P L++ PGP+T+VL + S + GL+++ VR+P + R
Sbjct: 77 --SNVPRTARILMEKFWPGPLTIVLEK--SGAVPYGTTGGLDTVAVRMPRHPVALALIRE 132
Query: 147 LESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFK 205
+A SAN++G+PS + D +E+L R + DGG G STV+DLT G+
Sbjct: 133 SGVPIAAPSANISGRPSPTTAGDVYEDLAGRVDIILDGGPCEVG-VESTVLDLT--GEVP 189
Query: 206 -ILRPGS-AKEETIAILEKHSL 225
ILRPG +EE A+L + L
Sbjct: 190 VILRPGGVTREELEAVLGRVEL 211
>gi|260587375|ref|ZP_05853288.1| Sua5/YciO/YrdC/YwlC family protein [Blautia hansenii DSM 20583]
gi|331083675|ref|ZP_08332786.1| hypothetical protein HMPREF0992_01710 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260542242|gb|EEX22811.1| Sua5/YciO/YrdC/YwlC family protein [Blautia hansenii DSM 20583]
gi|330403886|gb|EGG83438.1| hypothetical protein HMPREF0992_01710 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 349
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 10/194 (5%)
Query: 28 EEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINR 87
+EA + LK G ++A PT+T+YG D ++ + +IY KGR +PL I + D+ +N+
Sbjct: 19 KEAGEILKNGGLVAFPTETVYGLGGDGLNARSSEKIYTAKGRPSDNPLIIHIADMESLNK 78
Query: 88 FAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIA 144
+ +P L + PGP+T++ + SS + GLES+ VR+P+ +
Sbjct: 79 --IVRQIPEKAKLLAEKFWPGPLTMIFQK--SSEVPYETTGGLESVAVRMPNHPVALALI 134
Query: 145 RGLESALALTSANLTGQPSSVSVKDF-ENLWERCACVYDGGVLPSGRAGSTVVDLTRLGK 203
+ +A SAN +G+PS + E+L R + DGG + G ST+VD T
Sbjct: 135 QAGGGYIAAPSANTSGRPSPTKAEHVAEDLSGRIDMIVDGGDVGIGLE-STIVDFTENIP 193
Query: 204 FKILRPGSAKEETI 217
ILRPG + I
Sbjct: 194 V-ILRPGYINQAMI 206
>gi|220922794|ref|YP_002498096.1| Sua5/YciO/YrdC/YwlC family protein [Methylobacterium nodulans ORS
2060]
gi|219947401|gb|ACL57793.1| Sua5/YciO/YrdC/YwlC family protein [Methylobacterium nodulans ORS
2060]
Length = 335
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 3/205 (1%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
EA + L+ G+++A PT+T+YG DA + AV IY K R +PL + D++ R
Sbjct: 28 EAARLLREGRLVAFPTETVYGLGGDATNGAAVAGIYAAKERPRFNPLIAHLPDLAAARRE 87
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
L ++ PGP+T+V+ R E + + GL+S+ +RVP + R + R +
Sbjct: 88 GAFGPEALRLAETFWPGPLTLVVPRAEDACVCDLALAGLDSVALRVPAARLARDLLRAVG 147
Query: 149 SALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLGKFKIL 207
+A SAN +G+ S + +L R A V DGG P G + V L G ++L
Sbjct: 148 RPVAAPSANRSGRVSPTNADHVLGDLDGRIAAVLDGGACPVGVESTIVACLD--GDPQLL 205
Query: 208 RPGSAKEETIAILEKHSLVEEPAAG 232
RPG E I + L AAG
Sbjct: 206 RPGGVPREAIEAVLGRPLRAPGAAG 230
>gi|187925244|ref|YP_001896886.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia phytofirmans PsJN]
gi|187716438|gb|ACD17662.1| Sua5/YciO/YrdC/YwlC family protein [Burkholderia phytofirmans PsJN]
Length = 346
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 21 PATEAHAEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVG 80
P + E A L G+++A PT+T+YG DA S +AV RIY KGR P+ + +
Sbjct: 13 PVSAEQIEHAAALLDAGELVAFPTETVYGLGGDAESPDAVARIYAAKGRPANHPVIVHLA 72
Query: 81 DVSDINRFAVTDHLP---HGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDS 137
D N + + LP L+D+ PGP+T++L R ++ + +++ G +S+G+R P
Sbjct: 73 PQGDPNYW--VERLPAEAQRLIDAFWPGPLTLILKR--AARIPAAVSGGQDSVGLRCPSH 128
Query: 138 NFVRVI------ARGLESALALTSANLTGQPSSVSVKDFENLWERCACVYDGGVLPSGRA 191
+ + RG +A SAN G S + + + + V DGG G
Sbjct: 129 PVAQALLDAFNALRGGHGGVAAPSANRFGHVSPTTAQHVRDEFGGAIHVLDGGASDVG-I 187
Query: 192 GSTVVDLTRLGKFKILRPGSAKEETIA 218
ST++DL+R G +LRPG + IA
Sbjct: 188 ESTILDLSR-GFPALLRPGRVTPQDIA 213
>gi|118580209|ref|YP_901459.1| Sua5/YciO/YrdC/YwlC family protein [Pelobacter propionicus DSM
2379]
gi|118502919|gb|ABK99401.1| translation factor SUA5 [Pelobacter propionicus DSM 2379]
Length = 202
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 29 EAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDINRF 88
+ L+ G +IA PTDT YG C + + + RIY +K R+H P + ++S++ RF
Sbjct: 17 RVVDCLRNGGIIAYPTDTTYGIGCSIFNKKGIERIYRMKQREHKKPFSFICPNLSEVARF 76
Query: 89 AVTDHLPHGLLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVIARGLE 148
A + +L LPGP T VL + ++ L +++G+R+PD+ I + L
Sbjct: 77 ARVSNTAFKILKRYLPGPYTFVLE--ATRDVPDLLLTRQKTVGIRIPDNRICLEIVQMLG 134
Query: 149 SALALTSANL-----TGQPSSVSVKDFENLWERCACVYDGGVLPSGRAGSTVVDL 198
S + TSANL TG P + E + V DGG+L + S+VV+L
Sbjct: 135 SPIVTTSANLSGDEPTGNPGFID----EIFGHQLDIVVDGGIL--TKEVSSVVNL 183
>gi|296122108|ref|YP_003629886.1| Sua5/YciO/YrdC/YwlC family protein [Planctomyces limnophilus DSM
3776]
gi|296014448|gb|ADG67687.1| Sua5/YciO/YrdC/YwlC family protein [Planctomyces limnophilus DSM
3776]
Length = 322
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 27 AEEAIQALKTGKVIAVPTDTLYGFACDACSSEAVNRIYEIKGRKHTSPLAICVGDVSDIN 86
AEEAI+ALK G+++A+PT+T+YG A + E + +I+ K R PL + + ++
Sbjct: 9 AEEAIRALKAGELVALPTETVYGLAGLGLNPEVLAKIFSAKDRPTFDPLILHIARPGQVS 68
Query: 87 RFAVTDHLPHG---LLDSLLPGPVTVVLSRGESSNLEKSLNPGLESIGVRVPDSNFVRVI 143
+ A +PH L+D+ PGP+T+VL + ++ GL ++ VR P +R I
Sbjct: 69 QLA--SEVPHDARRLVDTFWPGPLTLVLPK--KPHVPDLATAGLGTVAVRCPKHPLMRKI 124
Query: 144 ARGLESALALTSANLTGQPSSVSVKD-FENLWERCACVYDGGVLPSGRAGSTVVDLTRLG 202
+ LA SANL G+ S S + E L R V DGG G ST++ G
Sbjct: 125 IEKVGVPLAAPSANLFGRLSPTSAQHVVEQLEGRIPYVLDGGACEVG-VESTIIGFMPDG 183
Query: 203 KFKILRPGSAKEETI 217
+ +LRPG E +
Sbjct: 184 VY-LLRPGGLPVEQV 197
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,566,581,378
Number of Sequences: 23463169
Number of extensions: 141380111
Number of successful extensions: 270126
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5379
Number of HSP's successfully gapped in prelim test: 1689
Number of HSP's that attempted gapping in prelim test: 258389
Number of HSP's gapped (non-prelim): 7188
length of query: 232
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 94
effective length of database: 9,121,278,045
effective search space: 857400136230
effective search space used: 857400136230
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 74 (33.1 bits)