BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026847
(232 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449452384|ref|XP_004143939.1| PREDICTED: homeobox protein knotted-1-like 7-like [Cucumis sativus]
gi|449495874|ref|XP_004159970.1| PREDICTED: homeobox protein knotted-1-like 7-like [Cucumis sativus]
Length = 301
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/219 (77%), Positives = 190/219 (86%), Gaps = 2/219 (0%)
Query: 1 MQEPSLGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVA 60
MQEP LG+M ++ GG GDVS + QL KAEIA+HPLYEQLL+AHV+CLRVA
Sbjct: 1 MQEPGLGMMTAAGGSSGGLSGDVSVSGEGVHNSQL-KAEIATHPLYEQLLSAHVACLRVA 59
Query: 61 TPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFK 120
TPIDQLP+IDAQL+QSHH+LRSY S QQ ++ N HSL+PHERQELDNFLAQY+IVLC+FK
Sbjct: 60 TPIDQLPMIDAQLSQSHHILRSYASSQQ-HHQNAHSLTPHERQELDNFLAQYMIVLCSFK 118
Query: 121 EQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD 180
EQLQQHVRVHAVEAVM CREIENTLQALTGVSLGEGTGATMSDDEDD+ MDFSLDQS +D
Sbjct: 119 EQLQQHVRVHAVEAVMACREIENTLQALTGVSLGEGTGATMSDDEDDIPMDFSLDQSGAD 178
Query: 181 SHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTYI 219
+HD+MGFGPLLPTE+ERSLMERVRQELKIELKQ + I
Sbjct: 179 AHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRI 217
>gi|356495645|ref|XP_003516685.1| PREDICTED: homeobox protein knotted-1-like 7-like [Glycine max]
Length = 377
Score = 326 bits (836), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 167/220 (75%), Positives = 182/220 (82%), Gaps = 24/220 (10%)
Query: 1 MQEPSLGVMGSSSSGGGGGGGDVSG-HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRV 59
MQEPSLG+MG +VSG HH Q +KAEI +HPLYEQLLAAHV+CLRV
Sbjct: 97 MQEPSLGLMG-----------EVSGDHHRQ------LKAEITTHPLYEQLLAAHVACLRV 139
Query: 60 ATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTF 119
ATPIDQLPLIDAQL+QSHH+LRSY S +N HSLSPH RQELDNFLAQYLIVLCTF
Sbjct: 140 ATPIDQLPLIDAQLSQSHHLLRSYVS------HNTHSLSPHHRQELDNFLAQYLIVLCTF 193
Query: 120 KEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSAS 179
KEQLQQHVRVHAVEAVM CR+IEN LQALTGVSLGEGTGATMSDDEDDL MD SLDQS++
Sbjct: 194 KEQLQQHVRVHAVEAVMACRDIENALQALTGVSLGEGTGATMSDDEDDLQMDISLDQSSA 253
Query: 180 DSHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTYI 219
+ HD+MGFGPLLPTE+ERSLMERVRQELKIELKQ + I
Sbjct: 254 EGHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRI 293
>gi|224058619|ref|XP_002299569.1| predicted protein [Populus trichocarpa]
gi|222846827|gb|EEE84374.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 322 bits (825), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 153/184 (83%), Positives = 169/184 (91%), Gaps = 3/184 (1%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KAEIA+HPLYEQLL+AHVSCLRVATPIDQLPLIDAQL+QSHH+LRSY S +N + H
Sbjct: 29 LKAEIATHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLLRSYAS---QHNQHGH 85
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
SLSPHERQ+LDNFLAQYLI+LCTFK+QLQQHVRVHAVEAVM CREIE TLQALTGV+LGE
Sbjct: 86 SLSPHERQDLDNFLAQYLIILCTFKDQLQQHVRVHAVEAVMACREIETTLQALTGVTLGE 145
Query: 156 GTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVM 215
GTGATMSDDEDDL MDFSLDQS++D HD+MGFGPLLPTE+ERSLMERVRQELKIELKQ
Sbjct: 146 GTGATMSDDEDDLQMDFSLDQSSADGHDMMGFGPLLPTESERSLMERVRQELKIELKQGF 205
Query: 216 TTYI 219
+ I
Sbjct: 206 KSRI 209
>gi|118481200|gb|ABK92551.1| unknown [Populus trichocarpa]
Length = 301
Score = 322 bits (825), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 153/184 (83%), Positives = 169/184 (91%), Gaps = 3/184 (1%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KAEIA+HPLYEQLL+AHVSCLRVATPIDQLPLIDAQL+QSHH+LRSY S +N + H
Sbjct: 37 LKAEIATHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLLRSYAS---QHNQHGH 93
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
SLSPHERQ+LDNFLAQYLI+LCTFK+QLQQHVRVHAVEAVM CREIE TLQALTGV+LGE
Sbjct: 94 SLSPHERQDLDNFLAQYLIILCTFKDQLQQHVRVHAVEAVMACREIETTLQALTGVTLGE 153
Query: 156 GTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVM 215
GTGATMSDDEDDL MDFSLDQS++D HD+MGFGPLLPTE+ERSLMERVRQELKIELKQ
Sbjct: 154 GTGATMSDDEDDLQMDFSLDQSSADGHDMMGFGPLLPTESERSLMERVRQELKIELKQGF 213
Query: 216 TTYI 219
+ I
Sbjct: 214 KSRI 217
>gi|255537235|ref|XP_002509684.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223549583|gb|EEF51071.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 302
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 158/198 (79%), Positives = 173/198 (87%), Gaps = 11/198 (5%)
Query: 22 DVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLR 81
+VSG DQT + +KAEIA+HPLYEQLL+AHVSCLRVATPIDQLPLIDAQL+QSHH++R
Sbjct: 32 EVSG--DQT---RQLKAEIANHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLIR 86
Query: 82 SYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREI 141
SY S + H LSPHERQELDNFLAQYLIVLC+FK+QLQQHVRVHAVEAVM CREI
Sbjct: 87 SYAS------QHPHPLSPHERQELDNFLAQYLIVLCSFKDQLQQHVRVHAVEAVMACREI 140
Query: 142 ENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLME 201
ENTL ALTGV+LGEGTGATMSDDEDDL MDFSLDQS +D HDLMGFGPLLPTE+ERSLME
Sbjct: 141 ENTLHALTGVTLGEGTGATMSDDEDDLQMDFSLDQSGADGHDLMGFGPLLPTESERSLME 200
Query: 202 RVRQELKIELKQVMTTYI 219
RVRQELKIELKQ + I
Sbjct: 201 RVRQELKIELKQGFKSRI 218
>gi|255637935|gb|ACU19284.1| unknown [Glycine max]
Length = 279
Score = 312 bits (800), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 164/220 (74%), Positives = 178/220 (80%), Gaps = 26/220 (11%)
Query: 1 MQEPSLGVMGSSSSGGGGGGGDVSG-HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRV 59
MQE LG+MG +VSG H Q +KAEIA+HPLYEQLLAAHV+CLRV
Sbjct: 1 MQEAGLGMMG-----------EVSGDQHRQ------LKAEIATHPLYEQLLAAHVACLRV 43
Query: 60 ATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTF 119
ATPIDQLPLIDAQL+QSHH+LRSY S N SLSPH RQELDNFLAQYLIVLCTF
Sbjct: 44 ATPIDQLPLIDAQLSQSHHLLRSYVS------RNTLSLSPHHRQELDNFLAQYLIVLCTF 97
Query: 120 KEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSAS 179
KEQLQQHVRVHAVEAVM CR+IENTLQALTGVSLGEGTGATMSDDEDDL MDFSLDQS++
Sbjct: 98 KEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGTGATMSDDEDDLQMDFSLDQSSA 157
Query: 180 DSHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTYI 219
+ HD+MGFG LPTE+ERSLMERVRQELKIELKQ + I
Sbjct: 158 EGHDMMGFG--LPTESERSLMERVRQELKIELKQGFKSKI 195
>gi|356539927|ref|XP_003538444.1| PREDICTED: homeobox protein knotted-1-like 7-like [Glycine max]
Length = 279
Score = 312 bits (799), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 164/220 (74%), Positives = 179/220 (81%), Gaps = 26/220 (11%)
Query: 1 MQEPSLGVMGSSSSGGGGGGGDVSG-HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRV 59
MQE LG+MG +VSG H Q +KAEIA+HPLYEQLLAAHV+CLRV
Sbjct: 1 MQEAGLGMMG-----------EVSGDQHRQ------LKAEIATHPLYEQLLAAHVACLRV 43
Query: 60 ATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTF 119
ATPIDQLPLIDAQL+QSHH+LRSY S +N SLSPH RQELDNFLAQYLIVLCTF
Sbjct: 44 ATPIDQLPLIDAQLSQSHHLLRSYVS------HNTLSLSPHHRQELDNFLAQYLIVLCTF 97
Query: 120 KEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSAS 179
KEQLQQHVRVHAVEAVM CR+IENTLQALTGVSLGEGTGATMSDDEDDL MDFSLDQS++
Sbjct: 98 KEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGTGATMSDDEDDLQMDFSLDQSSA 157
Query: 180 DSHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTYI 219
+ HD+MGFG LPTE+ERSLMERVRQELKIELKQ + I
Sbjct: 158 EGHDMMGFG--LPTESERSLMERVRQELKIELKQGFKSRI 195
>gi|302398831|gb|ADL36710.1| HD domain class transcription factor [Malus x domestica]
Length = 288
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/184 (79%), Positives = 164/184 (89%), Gaps = 4/184 (2%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KAEIA+HPLYEQLL+AHVSCLRVATPIDQLPLIDAQL+QSHH+LRSY S Q +
Sbjct: 25 LKAEIATHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLLRSYASQPQ----HAQ 80
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
S+SPHERQELDNFLAQYLIVLC+FKE LQQHVRVHAVEAVM CREIE+ LQALTGVSLGE
Sbjct: 81 SVSPHERQELDNFLAQYLIVLCSFKEHLQQHVRVHAVEAVMACREIESNLQALTGVSLGE 140
Query: 156 GTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVM 215
+GATMSDDEDD+ MDF++DQS+ + HD+MGFGPLLPTE+ERSLMERVRQELKIELKQ
Sbjct: 141 VSGATMSDDEDDMPMDFTMDQSSGEGHDMMGFGPLLPTESERSLMERVRQELKIELKQGF 200
Query: 216 TTYI 219
+ I
Sbjct: 201 KSRI 204
>gi|356514089|ref|XP_003525739.1| PREDICTED: homeobox protein knotted-1-like 7-like [Glycine max]
Length = 293
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/219 (72%), Positives = 176/219 (80%), Gaps = 14/219 (6%)
Query: 1 MQEPSLGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVA 60
MQE LG MG S G GD HH Q +KAEIA+HPLYEQLL+AHVSCLRVA
Sbjct: 1 MQEAGLG-MGMVS-GEVSAAGDHHHHHRQ------VKAEIATHPLYEQLLSAHVSCLRVA 52
Query: 61 TPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFK 120
TPIDQLPLID QL+QSHH+LRSY S + + + +RQELDNF+AQYLIVLCTFK
Sbjct: 53 TPIDQLPLIDGQLSQSHHLLRSYASHHSHSLSPH------DRQELDNFMAQYLIVLCTFK 106
Query: 121 EQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD 180
EQLQQHVRVHAVEAVM CR+IE+TLQALTGVSLGEGTGATMSDDEDDL MD SLDQS+++
Sbjct: 107 EQLQQHVRVHAVEAVMACRDIESTLQALTGVSLGEGTGATMSDDEDDLQMDGSLDQSSAE 166
Query: 181 SHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTYI 219
HDLMGFGPLLPTE+ERSLMERVRQELKIELKQ + I
Sbjct: 167 GHDLMGFGPLLPTESERSLMERVRQELKIELKQGFKSRI 205
>gi|363806766|ref|NP_001242278.1| uncharacterized protein LOC100782179 [Glycine max]
gi|255635799|gb|ACU18248.1| unknown [Glycine max]
Length = 292
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/194 (75%), Positives = 165/194 (85%), Gaps = 12/194 (6%)
Query: 26 HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGS 85
HH Q +KAEIA+HPLYEQLL+AHVSCLRVATPIDQLPLID QL+QSHH+LRSY S
Sbjct: 23 HHRQ------VKAEIANHPLYEQLLSAHVSCLRVATPIDQLPLIDGQLSQSHHLLRSYAS 76
Query: 86 LQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTL 145
+ + + +RQELDNF+AQYLIVLCTFKEQLQQHVRVHAVEAVM CR+IE+TL
Sbjct: 77 HHSHSLSPH------DRQELDNFMAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIESTL 130
Query: 146 QALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQ 205
QALTGVSLGEGTGATMSDDEDDL M+ SLDQS++D HD+MGFGPLLPTE+ERSLMERVRQ
Sbjct: 131 QALTGVSLGEGTGATMSDDEDDLQMNGSLDQSSADGHDMMGFGPLLPTESERSLMERVRQ 190
Query: 206 ELKIELKQVMTTYI 219
ELKIELKQ + I
Sbjct: 191 ELKIELKQGFKSRI 204
>gi|225426739|ref|XP_002282231.1| PREDICTED: homeobox protein knotted-1-like 7 [Vitis vinifera]
gi|297742619|emb|CBI34768.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 147/184 (79%), Positives = 162/184 (88%), Gaps = 3/184 (1%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+K EI +HPLYEQLLAAHV+CLRVATPIDQLPLIDAQL QSHH+LRSY S Q + N
Sbjct: 27 LKGEIVTHPLYEQLLAAHVACLRVATPIDQLPLIDAQLTQSHHLLRSYASQQHHHGN--- 83
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
SLSPHERQELDNFL+QYL+VLCTFKEQLQQHVRVHAVEAVM CREIE TLQALTGVSLGE
Sbjct: 84 SLSPHERQELDNFLSQYLLVLCTFKEQLQQHVRVHAVEAVMACREIEQTLQALTGVSLGE 143
Query: 156 GTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVM 215
G+GATMSDDE+++ MDFSLDQ D HD+MGFGPLLPTE+ER+LMERVRQELKIELKQ
Sbjct: 144 GSGATMSDDEEEMQMDFSLDQGGGDGHDMMGFGPLLPTESERTLMERVRQELKIELKQGF 203
Query: 216 TTYI 219
+ I
Sbjct: 204 KSRI 207
>gi|350535332|ref|NP_001233933.1| homeobox 2 protein [Solanum lycopersicum]
gi|4098246|gb|AAD00253.1| homeobox 2 protein [Solanum lycopersicum]
Length = 310
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/226 (68%), Positives = 177/226 (78%), Gaps = 11/226 (4%)
Query: 2 QEPSLGVMGSSSSGGGGGGGDVSG-------HHDQTAT-VQLIKAEIASHPLYEQLLAAH 53
+E LG+MGSS++ G GGG D+S HH++ +K+EIA+HPLYEQLL+AH
Sbjct: 4 EEGGLGLMGSSNTSGLGGG-DISSMMISSEDHHNRNLNHYNQLKSEIATHPLYEQLLSAH 62
Query: 54 VSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYL 113
V+CLRV TPIDQLPLIDAQL QSH++LRSY S QQ ++ S ERQELDNFLAQYL
Sbjct: 63 VACLRVRTPIDQLPLIDAQLTQSHNLLRSYASSQQQQQQHSLSHH--ERQELDNFLAQYL 120
Query: 114 IVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFS 173
+VLC+FKEQLQQHVRVHAVEAVM CREIE LQ LTG +LGEGTGATMSDDED+L MDFS
Sbjct: 121 LVLCSFKEQLQQHVRVHAVEAVMACREIEQNLQLLTGATLGEGTGATMSDDEDELQMDFS 180
Query: 174 LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTYI 219
LD S D+HDLMG G LPTE+ERSLMERVRQELKIELKQ + I
Sbjct: 181 LDVSGGDAHDLMGMGFGLPTESERSLMERVRQELKIELKQGFRSRI 226
>gi|357481773|ref|XP_003611172.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|132424657|gb|ABO33481.1| class II KNOX homeobox transcription factor [Medicago truncatula]
gi|355512507|gb|AES94130.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
Length = 292
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 147/188 (78%), Positives = 163/188 (86%), Gaps = 10/188 (5%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KAEIA+HPLYEQLL+AHV+CLRVATPIDQLPLIDAQL+QSHH+LRSY S Q H
Sbjct: 27 LKAEIATHPLYEQLLSAHVACLRVATPIDQLPLIDAQLSQSHHLLRSYISQQ------TH 80
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
SLSPH+RQ+LDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVM CR+IENTLQALTGVSLGE
Sbjct: 81 SLSPHDRQQLDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGE 140
Query: 156 GTGATMSDDEDD-LHMDFSLDQSAS---DSHDLMGFGPLLPTETERSLMERVRQELKIEL 211
G+GATMSDDED+ L MD+ LD +S HD+MG GPLLPTE+ERSLMERVRQELKIEL
Sbjct: 141 GSGATMSDDEDEQLQMDYGLDNQSSGGGGDHDMMGLGPLLPTESERSLMERVRQELKIEL 200
Query: 212 KQVMTTYI 219
KQ + I
Sbjct: 201 KQGFKSRI 208
>gi|357481771|ref|XP_003611171.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|355512506|gb|AES94129.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
Length = 305
Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 147/188 (78%), Positives = 163/188 (86%), Gaps = 10/188 (5%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KAEIA+HPLYEQLL+AHV+CLRVATPIDQLPLIDAQL+QSHH+LRSY S Q H
Sbjct: 27 LKAEIATHPLYEQLLSAHVACLRVATPIDQLPLIDAQLSQSHHLLRSYISQQ------TH 80
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
SLSPH+RQ+LDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVM CR+IENTLQALTGVSLGE
Sbjct: 81 SLSPHDRQQLDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGE 140
Query: 156 GTGATMSDDEDD-LHMDFSLDQSAS---DSHDLMGFGPLLPTETERSLMERVRQELKIEL 211
G+GATMSDDED+ L MD+ LD +S HD+MG GPLLPTE+ERSLMERVRQELKIEL
Sbjct: 141 GSGATMSDDEDEQLQMDYGLDNQSSGGGGDHDMMGLGPLLPTESERSLMERVRQELKIEL 200
Query: 212 KQVMTTYI 219
KQ + I
Sbjct: 201 KQGFKSRI 208
>gi|18407708|ref|NP_564805.1| homeobox protein knotted-1-like 7 [Arabidopsis thaliana]
gi|75309277|sp|Q9FPQ8.1|KNAT7_ARATH RecName: Full=Homeobox protein knotted-1-like 7; AltName:
Full=Protein IRREGULAR XYLEM 11; AltName: Full=Protein
KNAT7
gi|11878230|gb|AAG40858.1|AF308451_1 homeodomain transcription factor KNAT7 [Arabidopsis thaliana]
gi|109946473|gb|ABG48415.1| At1g62990 [Arabidopsis thaliana]
gi|332195913|gb|AEE34034.1| homeobox protein knotted-1-like 7 [Arabidopsis thaliana]
Length = 291
Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 144/222 (64%), Positives = 172/222 (77%), Gaps = 18/222 (8%)
Query: 1 MQEPSLGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVA 60
MQE +LG+MG++ GG GD + +Q + +K EIA+HP+YEQLLAAHV+CLRVA
Sbjct: 1 MQEAALGMMGATV----GGDGDTAVVAEQN---RQLKGEIATHPMYEQLLAAHVACLRVA 53
Query: 61 TPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFK 120
TPIDQLP+I+AQL+QSHH+LRSY S + H+R ELDNFLAQY++VLC+FK
Sbjct: 54 TPIDQLPIIEAQLSQSHHLLRSYASTAVGYH--------HDRHELDNFLAQYVMVLCSFK 105
Query: 121 EQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD 180
EQLQQHVRVHAVEAVM CREIEN L +LTG +LGEG+GATMS+DEDDL MDFS D S D
Sbjct: 106 EQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVD 165
Query: 181 ---SHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTYI 219
HD+ GFGPLLPTE+ERSLMERVRQELK+ELKQ + I
Sbjct: 166 FSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRI 207
>gi|297840209|ref|XP_002887986.1| hypothetical protein ARALYDRAFT_475053 [Arabidopsis lyrata subsp.
lyrata]
gi|297333827|gb|EFH64245.1| hypothetical protein ARALYDRAFT_475053 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 142/222 (63%), Positives = 172/222 (77%), Gaps = 18/222 (8%)
Query: 1 MQEPSLGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVA 60
MQE +LG++G++ GG GD +Q + +K EIA+HP+YEQLLAAHV+CLRVA
Sbjct: 1 MQEAALGMIGATV----GGDGDAPAVAEQN---RQMKGEIATHPMYEQLLAAHVACLRVA 53
Query: 61 TPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFK 120
TPIDQLP+I+AQL+QSHH++RSY S +N H+R ELDNFLAQY++VLC+FK
Sbjct: 54 TPIDQLPIIEAQLSQSHHLIRSYASTAVGYSN-------HDR-ELDNFLAQYIMVLCSFK 105
Query: 121 EQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD 180
EQLQQHVRVHAVEAVM CREIEN L +LTG +LGEG+GATMS+DEDD+ MDFS D S D
Sbjct: 106 EQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDIQMDFSSDNSGVD 165
Query: 181 ---SHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTYI 219
HD+ GFGPLLPTE+ERSLMERVRQELK+ELKQ + I
Sbjct: 166 FSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRI 207
>gi|26451690|dbj|BAC42940.1| putative homeodomain transcription factor KNAT6 [Arabidopsis
thaliana]
Length = 284
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/205 (66%), Positives = 161/205 (78%), Gaps = 14/205 (6%)
Query: 18 GGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSH 77
GG GD + +Q + +K EIA+HP+YEQLLAAHV+CLRVATPIDQLP+I+AQL+QSH
Sbjct: 7 GGDGDTAVVAEQN---RQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSH 63
Query: 78 HVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMG 137
H+LRSY S + H+R ELDNFLAQY++VLC+FKEQLQQHVRVHAVEAVM
Sbjct: 64 HLLRSYASTAVGYH--------HDRHELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMA 115
Query: 138 CREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD---SHDLMGFGPLLPTE 194
CREIEN L +LTG +LGEG+GATMS+DEDDL MDFS D S D HD+ GFGPLLPTE
Sbjct: 116 CREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTE 175
Query: 195 TERSLMERVRQELKIELKQVMTTYI 219
+ERSLMERVRQELK+ELKQ + I
Sbjct: 176 SERSLMERVRQELKLELKQGFKSRI 200
>gi|8493589|gb|AAF75812.1|AC011000_15 Strong similarity to Homeobox Protein HD1 from Brassica napus
gi|1170191, and contains a lactate/malate dehydrogenase
PF|00056 domain [Arabidopsis thaliana]
Length = 283
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/205 (66%), Positives = 161/205 (78%), Gaps = 14/205 (6%)
Query: 18 GGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSH 77
GG GD + +Q + +K EIA+HP+YEQLLAAHV+CLRVATPIDQLP+I+AQL+QSH
Sbjct: 6 GGDGDTAVVAEQN---RQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSH 62
Query: 78 HVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMG 137
H+LRSY S + H+R ELDNFLAQY++VLC+FKEQLQQHVRVHAVEAVM
Sbjct: 63 HLLRSYASTAVGYH--------HDRHELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMA 114
Query: 138 CREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD---SHDLMGFGPLLPTE 194
CREIEN L +LTG +LGEG+GATMS+DEDDL MDFS D S D HD+ GFGPLLPTE
Sbjct: 115 CREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTE 174
Query: 195 TERSLMERVRQELKIELKQVMTTYI 219
+ERSLMERVRQELK+ELKQ + I
Sbjct: 175 SERSLMERVRQELKLELKQGFKSRI 199
>gi|1170191|sp|P46606.1|HD1_BRANA RecName: Full=Homeobox protein HD1
gi|453949|emb|CAA82314.1| homeodomain-containing protein [Brassica napus]
gi|1090522|prf||2019252A homeobox protein
Length = 294
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 153/187 (81%), Gaps = 10/187 (5%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+K EIA+HP+Y+QLLAAHV+CLRVATPIDQLP+I+AQL+ SHH+LRSY S
Sbjct: 31 MKGEIATHPMYDQLLAAHVACLRVATPIDQLPIIEAQLSHSHHLLRSYASTAVG------ 84
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
S H+RQELDNFLAQY++VLC+FKEQLQQHVRVHAVEAVM CREIEN L +LTG +LGE
Sbjct: 85 -FSHHDRQELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGE 143
Query: 156 GTGATMSDDEDDLHMDFSLDQSASD---SHDLMGFGPLLPTETERSLMERVRQELKIELK 212
G+GATMS+DEDDL MDFS D S D HD+ GFGPLLPTE+ERSLMERVRQELK+ELK
Sbjct: 144 GSGATMSEDEDDLQMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELK 203
Query: 213 QVMTTYI 219
Q + I
Sbjct: 204 QGFKSRI 210
>gi|21618231|gb|AAM67281.1| homeodomain-containing protein HD1, putative [Arabidopsis thaliana]
Length = 283
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/205 (66%), Positives = 161/205 (78%), Gaps = 14/205 (6%)
Query: 18 GGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSH 77
GG GD + +Q + +K EIA+HP+YEQLLAAHV+CLRVATPIDQLP+I+AQL+QSH
Sbjct: 6 GGDGDAAVVAEQN---RQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSH 62
Query: 78 HVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMG 137
H+LRSY S + H+R ELDNFLAQY++VLC+FKEQLQQHVRVHAVEAVM
Sbjct: 63 HLLRSYASTAVGYH--------HDRHELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMA 114
Query: 138 CREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD---SHDLMGFGPLLPTE 194
CREIEN L +LTG +LGEG+GATMS+DEDDL MDFS D S D HD+ GFGPLLPTE
Sbjct: 115 CREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTE 174
Query: 195 TERSLMERVRQELKIELKQVMTTYI 219
+E+SLMERVRQELK+ELKQ + I
Sbjct: 175 SEKSLMERVRQELKLELKQGFKSRI 199
>gi|326526697|dbj|BAK00737.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 315
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/189 (66%), Positives = 153/189 (80%), Gaps = 9/189 (4%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
QL+K E+A HPL EQL+AAHV CLRVATPID LPLIDAQLAQS+ +L SY + ++
Sbjct: 50 QLLKGEMAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSNGLLHSYAA------HH 103
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
LSPH++QELD+FLAQYL++LC+F+EQLQQHVRVHAVEAVM CREIE +LQ LTG SL
Sbjct: 104 RPFLSPHDKQELDSFLAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGASL 163
Query: 154 GEGTGATMSDDEDD---LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIE 210
EGTGATMS+DED+ + M+ + +S+ HD+MGFGPL+PT+TERSLMERVRQELKIE
Sbjct: 164 EEGTGATMSEDEDEGPLMIMEAAPLDMSSNGHDMMGFGPLVPTDTERSLMERVRQELKIE 223
Query: 211 LKQVMTTYI 219
LKQ + I
Sbjct: 224 LKQGFKSRI 232
>gi|218191994|gb|EEC74421.1| hypothetical protein OsI_09790 [Oryza sativa Indica Group]
gi|222624111|gb|EEE58243.1| hypothetical protein OsJ_09228 [Oryza sativa Japonica Group]
Length = 306
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/188 (67%), Positives = 151/188 (80%), Gaps = 9/188 (4%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
QL+K EIA HPL EQL+AAHV CLRVATPID LPLIDAQLAQS +L SY + ++
Sbjct: 43 QLLKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAA------HH 96
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
LSPH++QELD+FLAQY+++LC+F+EQLQQHVRVHAVEAVM CREIE +LQ LTG +L
Sbjct: 97 RPFLSPHDKQELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATL 156
Query: 154 GEGTGATMSDDEDDLH--MDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIEL 211
EGTGATMS+DED+ ++ +D SD HDLMGFGPL+PT++ERSLMERVRQELKIEL
Sbjct: 157 EEGTGATMSEDEDETAPMLEGPMDM-GSDGHDLMGFGPLMPTDSERSLMERVRQELKIEL 215
Query: 212 KQVMTTYI 219
KQ + I
Sbjct: 216 KQGFKSRI 223
>gi|75306683|sp|Q94LW3.1|KNOS3_ORYSJ RecName: Full=Homeobox protein knotted-1-like 3; AltName:
Full=Homeobox protein HOS66
gi|14149141|dbj|BAB55660.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
Group]
gi|108705925|gb|ABF93720.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
Group]
gi|108705927|gb|ABF93722.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
Group]
Length = 314
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/188 (67%), Positives = 151/188 (80%), Gaps = 9/188 (4%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
QL+K EIA HPL EQL+AAHV CLRVATPID LPLIDAQLAQS +L SY + ++
Sbjct: 51 QLLKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAA------HH 104
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
LSPH++QELD+FLAQY+++LC+F+EQLQQHVRVHAVEAVM CREIE +LQ LTG +L
Sbjct: 105 RPFLSPHDKQELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATL 164
Query: 154 GEGTGATMSDDEDDLH--MDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIEL 211
EGTGATMS+DED+ ++ +D SD HDLMGFGPL+PT++ERSLMERVRQELKIEL
Sbjct: 165 EEGTGATMSEDEDETAPMLEGPMDM-GSDGHDLMGFGPLMPTDSERSLMERVRQELKIEL 223
Query: 212 KQVMTTYI 219
KQ + I
Sbjct: 224 KQGFKSRI 231
>gi|115450409|ref|NP_001048805.1| Os03g0123500 [Oryza sativa Japonica Group]
gi|113547276|dbj|BAF10719.1| Os03g0123500, partial [Oryza sativa Japonica Group]
Length = 287
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/188 (67%), Positives = 151/188 (80%), Gaps = 9/188 (4%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
QL+K EIA HPL EQL+AAHV CLRVATPID LPLIDAQLAQS +L SY + ++
Sbjct: 24 QLLKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAA------HH 77
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
LSPH++QELD+FLAQY+++LC+F+EQLQQHVRVHAVEAVM CREIE +LQ LTG +L
Sbjct: 78 RPFLSPHDKQELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATL 137
Query: 154 GEGTGATMSDDEDDLH--MDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIEL 211
EGTGATMS+DED+ ++ +D SD HDLMGFGPL+PT++ERSLMERVRQELKIEL
Sbjct: 138 EEGTGATMSEDEDETAPMLEGPMDM-GSDGHDLMGFGPLMPTDSERSLMERVRQELKIEL 196
Query: 212 KQVMTTYI 219
KQ + I
Sbjct: 197 KQGFKSRI 204
>gi|226531836|ref|NP_001150419.1| homeobox protein HD1 [Zea mays]
gi|195639114|gb|ACG39025.1| homeobox protein HD1 [Zea mays]
gi|414864470|tpg|DAA43027.1| TPA: putative knotted-like transcription factor family protein [Zea
mays]
Length = 310
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 125/187 (66%), Positives = 150/187 (80%), Gaps = 8/187 (4%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
QL+K EIA HPL EQL+AAHV CLRVATPID LPLIDAQLAQS +L SY + ++
Sbjct: 48 QLLKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAA------HH 101
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
LSPH++ +LD+FLAQYL++LC+F+EQLQQHVRVHAVEAVM CREIE +LQ LTG +L
Sbjct: 102 RPFLSPHDKHDLDSFLAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATL 161
Query: 154 GEGTGATMSDDEDDLHM-DFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELK 212
EGTGATMS+DED+ M + LD SD HD+MGFGPL+PT++ERSLMERVRQELK+ELK
Sbjct: 162 EEGTGATMSEDEDEAPMLEVGLDM-GSDGHDMMGFGPLMPTDSERSLMERVRQELKMELK 220
Query: 213 QVMTTYI 219
Q + I
Sbjct: 221 QGFKSRI 227
>gi|226532656|ref|NP_001151200.1| LOC100284833 [Zea mays]
gi|195644982|gb|ACG41959.1| homeobox protein HD1 [Zea mays]
Length = 315
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 125/188 (66%), Positives = 150/188 (79%), Gaps = 8/188 (4%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
QL+K EIA HPL EQL+AAHV CLRVATPID LPLIDAQLAQS +L SY + ++
Sbjct: 51 QLLKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAA------HH 104
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
+ L PH++ +LD+FLAQYL++LC+F+EQLQQHVRVHAVEAVM CREIE +LQ LTGV+L
Sbjct: 105 SPFLXPHDKHDLDSFLAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGVTL 164
Query: 154 GEGTGATMS-DDEDDLHM-DFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIEL 211
EGTGATMS +DED+ M + L SD HD+MGFGPLLPT++ERSLM+RVRQELKIEL
Sbjct: 165 EEGTGATMSEEDEDEAPMLEVGLVDMGSDGHDMMGFGPLLPTDSERSLMDRVRQELKIEL 224
Query: 212 KQVMTTYI 219
KQ + I
Sbjct: 225 KQGFKSRI 232
>gi|356515190|ref|XP_003526284.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 400
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 151/209 (72%), Gaps = 20/209 (9%)
Query: 14 SGGGGGGGDVSGHHDQTATVQ--------LIKAEIASHPLYEQLLAAHVSCLRVATPIDQ 65
+G G GD+ G +TA V +KAEI +HPLYEQLL+AHV+CLR+ATP+DQ
Sbjct: 112 AGAGAESGDLKG---ETAPVDGLLNWQNARLKAEILTHPLYEQLLSAHVACLRIATPVDQ 168
Query: 66 LPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
LP IDAQLAQS +V+ Y + QA ++ +ELD FL+ Y+++LC+FKEQLQQ
Sbjct: 169 LPRIDAQLAQSQNVVAKYSAFGQAIVGDD--------KELDQFLSHYVLLLCSFKEQLQQ 220
Query: 126 HVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDL 184
HVRVHA+EAVM C EIE +LQ+LTGVS GEGTGATMSDDED+ + D +L A D D
Sbjct: 221 HVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDEDEQVDSDANLFDGALDGPDS 280
Query: 185 MGFGPLLPTETERSLMERVRQELKIELKQ 213
MGFGPL+PTE ERSLMERVR ELK ELKQ
Sbjct: 281 MGFGPLIPTENERSLMERVRHELKHELKQ 309
>gi|357114296|ref|XP_003558936.1| PREDICTED: homeobox protein knotted-1-like 3-like [Brachypodium
distachyon]
Length = 260
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 147/184 (79%), Gaps = 11/184 (5%)
Query: 40 IASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSP 99
+A HPL EQL+AAHV CLRVATPID LP+IDAQLAQS +L SY + ++ LSP
Sbjct: 1 MAVHPLCEQLVAAHVGCLRVATPIDHLPIIDAQLAQSGGLLHSYAA------HHRPFLSP 54
Query: 100 HERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGA 159
H++Q+LD+FLAQYL++LC+F+EQLQQHVRVHAVEAVM CREIE +LQ LTG +L EGTGA
Sbjct: 55 HDKQDLDSFLAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGA 114
Query: 160 TMSDDEDD----LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVM 215
TMS+DE++ + ++D S S+ HD+MGFGPL+PT++ERSLMERVRQELKIELKQ
Sbjct: 115 TMSEDEEEPQTIMEAAAAMDMS-SNGHDMMGFGPLVPTDSERSLMERVRQELKIELKQGF 173
Query: 216 TTYI 219
+ I
Sbjct: 174 KSRI 177
>gi|388520497|gb|AFK48310.1| unknown [Medicago truncatula]
Length = 160
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/167 (74%), Positives = 138/167 (82%), Gaps = 16/167 (9%)
Query: 1 MQEPSLGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVA 60
MQEPSLG+M S GG GGG+ +KAEIA+HPLYEQLL+AHV+CLRVA
Sbjct: 1 MQEPSLGMMQGSGGYGGDGGGENRQ----------LKAEIATHPLYEQLLSAHVACLRVA 50
Query: 61 TPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFK 120
TPIDQLPLIDAQL+QSHH+LRSY S Q HSLSPH+RQ+LDNFLAQYLIVLCTFK
Sbjct: 51 TPIDQLPLIDAQLSQSHHLLRSYISQQ------THSLSPHDRQQLDNFLAQYLIVLCTFK 104
Query: 121 EQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD 167
EQLQQHVRVHAVEAVM CR+IENTLQALTGVSLGEG+GATMSDDED+
Sbjct: 105 EQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGSGATMSDDEDE 151
>gi|359475858|ref|XP_002285407.2| PREDICTED: homeobox protein knotted-1-like 3-like [Vitis vinifera]
Length = 415
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 119/199 (59%), Positives = 147/199 (73%), Gaps = 8/199 (4%)
Query: 18 GGGGDVSGHHDQTATVQLI--KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQ 75
G G +++ D Q KAEI +HPLYEQLL++HV+CLR+ATP+DQLP IDAQLAQ
Sbjct: 132 GNGAEIAESGDVAVNWQNARQKAEILAHPLYEQLLSSHVACLRIATPVDQLPRIDAQLAQ 191
Query: 76 SHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAV 135
S HV+ Y +L N S + +ELD F+ Y+++LC+FKEQLQQHVRVHA+EAV
Sbjct: 192 SQHVVSKYSALGHGN-----SQMLGDEKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAV 246
Query: 136 MGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTE 194
M C EIE +LQ+LTGVS GEGTGATMSDDE+D + D +L + + D MGFGPL+PTE
Sbjct: 247 MACWEIEQSLQSLTGVSPGEGTGATMSDDEEDQIDSDANLFDGSLEGADSMGFGPLVPTE 306
Query: 195 TERSLMERVRQELKIELKQ 213
+ERSLMERVRQELK ELKQ
Sbjct: 307 SERSLMERVRQELKHELKQ 325
>gi|225463014|ref|XP_002265494.1| PREDICTED: homeobox protein knotted-1-like 3 [Vitis vinifera]
Length = 430
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 151/209 (72%), Gaps = 17/209 (8%)
Query: 10 GSSSSGGGGGGGDV----SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQ 65
G++ + G G D+ SG + + A KA+I +HPLYEQLL+AHVSCLR+ATP+DQ
Sbjct: 144 GNNQNRGDNNGEDMLDCDSGGNWENARY---KADILAHPLYEQLLSAHVSCLRIATPVDQ 200
Query: 66 LPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
LP IDAQLAQS V+ Y L AN P + +ELD F+ Y+++LC+FKEQLQQ
Sbjct: 201 LPRIDAQLAQSQGVVTKYSVL--AN-------QPLDDKELDQFMTHYVLLLCSFKEQLQQ 251
Query: 126 HVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDL 184
HVRVHA+EAVM C E+E +LQ+LTGVS GEGTGATMSDDEDD + +L + D D
Sbjct: 252 HVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDEDDQADSEINLFDGSLDGPDS 311
Query: 185 MGFGPLLPTETERSLMERVRQELKIELKQ 213
MGFGPL+PTETERSLMERVRQELK ELKQ
Sbjct: 312 MGFGPLVPTETERSLMERVRQELKHELKQ 340
>gi|296084578|emb|CBI25599.3| unnamed protein product [Vitis vinifera]
Length = 413
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 151/209 (72%), Gaps = 17/209 (8%)
Query: 10 GSSSSGGGGGGGDV----SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQ 65
G++ + G G D+ SG + + A KA+I +HPLYEQLL+AHVSCLR+ATP+DQ
Sbjct: 116 GNNQNRGDNNGEDMLDCDSGGNWENARY---KADILAHPLYEQLLSAHVSCLRIATPVDQ 172
Query: 66 LPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
LP IDAQLAQS V+ Y L AN P + +ELD F+ Y+++LC+FKEQLQQ
Sbjct: 173 LPRIDAQLAQSQGVVTKYSVL--AN-------QPLDDKELDQFMTHYVLLLCSFKEQLQQ 223
Query: 126 HVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDL 184
HVRVHA+EAVM C E+E +LQ+LTGVS GEGTGATMSDDEDD + +L + D D
Sbjct: 224 HVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDEDDQADSEINLFDGSLDGPDS 283
Query: 185 MGFGPLLPTETERSLMERVRQELKIELKQ 213
MGFGPL+PTETERSLMERVRQELK ELKQ
Sbjct: 284 MGFGPLVPTETERSLMERVRQELKHELKQ 312
>gi|356507510|ref|XP_003522507.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 411
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 149/209 (71%), Gaps = 12/209 (5%)
Query: 9 MGSSSSGG-GGGGGDVSGHHDQTATVQ--LIKAEIASHPLYEQLLAAHVSCLRVATPIDQ 65
M ++ SG G V G D Q +KAEI +HPLYEQLL+AHV+CLR+ATP+DQ
Sbjct: 120 MAAAESGDLKGDAAAVEGGSDGLMNWQNARLKAEILAHPLYEQLLSAHVACLRIATPVDQ 179
Query: 66 LPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
LP IDAQL QS +V+ Y + QA ++ +ELD FL+ Y+++LC+FKEQLQQ
Sbjct: 180 LPRIDAQLTQSQNVVAKYSAFGQAIVGDD--------KELDQFLSHYVLLLCSFKEQLQQ 231
Query: 126 HVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDL 184
HVRVHA+EAVM C EIE +LQ+LTGVS GEGTGATMSD+ED+ + D +L A D D
Sbjct: 232 HVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDEEDEQVDSDANLFDGALDGPDS 291
Query: 185 MGFGPLLPTETERSLMERVRQELKIELKQ 213
MGFGPL+PTE ERSLMERVR ELK ELKQ
Sbjct: 292 MGFGPLIPTENERSLMERVRHELKHELKQ 320
>gi|329757149|gb|AEC04754.1| knotted-like homeobox KNOX5 [Fragaria vesca]
Length = 368
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 152/213 (71%), Gaps = 20/213 (9%)
Query: 7 GVMGSSSSGG-----GGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVAT 61
+ + S GG GGG G ++ + + KAEI +HPLYE LL+AHV+CLR+AT
Sbjct: 12 AALNNKSEGGVAVESGGGDGVMNWQNARH------KAEILAHPLYEPLLSAHVACLRIAT 65
Query: 62 PIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKE 121
P+DQLP IDAQLAQS +V+ Y + +H + ++ ELD F+ Y+++LC+FKE
Sbjct: 66 PVDQLPRIDAQLAQSQNVVAKYSGM-------SHGMVGDDK-ELDQFMRHYVLLLCSFKE 117
Query: 122 QLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMS-DDEDDLHMDFSLDQSASD 180
QLQQHVRVHA+EAVM C EIE +LQ+LTGVS GEGTGATMS DDE+ + D +L + D
Sbjct: 118 QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEEQVDSDANLFDGSMD 177
Query: 181 SHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
HD MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 178 GHDSMGFGPLIPTESERSLMERVRQELKHELKQ 210
>gi|21554222|gb|AAM63298.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
Length = 431
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 148/216 (68%), Gaps = 23/216 (10%)
Query: 8 VMGSSSSGGGGGGGDVSGHHDQTATVQLI----KAEIASHPLYEQLLAAHVSCLRVATPI 63
+ G +GGG D G V KAEI SHPLYEQLL+AHV+CLR+ATP+
Sbjct: 127 IQGEMKTGGGENKNDGGGATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPV 186
Query: 64 DQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
DQLP IDAQLAQS HV+ Y +L A L ++ ELD F+ Y+++LC+FKEQL
Sbjct: 187 DQLPRIDAQLAQSQHVVAKYSALGAAA----QGLVGDDK-ELDQFMTHYVLLLCSFKEQL 241
Query: 124 QQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH- 182
QQHVRVHA+EAVM C EIE +LQ+LTGVS GEG GATMSDDED +Q SD++
Sbjct: 242 QQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDED--------EQVESDANM 293
Query: 183 -----DLMGFGPLLPTETERSLMERVRQELKIELKQ 213
D++GFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 294 FDGGLDVLGFGPLIPTESERSLMERVRQELKHELKQ 329
>gi|15238743|ref|NP_197904.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
gi|1346387|sp|P48000.1|KNAT3_ARATH RecName: Full=Homeobox protein knotted-1-like 3; AltName:
Full=Protein KNAT3
gi|1045042|emb|CAA63130.1| KNAT3 homeobox protein [Arabidopsis thaliana]
gi|4063731|gb|AAC98441.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
gi|332006030|gb|AED93413.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
Length = 431
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 148/216 (68%), Gaps = 23/216 (10%)
Query: 8 VMGSSSSGGGGGGGDVSGHHDQTATVQLI----KAEIASHPLYEQLLAAHVSCLRVATPI 63
+ G +GGG D G V KAEI SHPLYEQLL+AHV+CLR+ATP+
Sbjct: 127 IQGEMKTGGGENKNDGGGATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPV 186
Query: 64 DQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
DQLP IDAQLAQS HV+ Y +L A L ++ ELD F+ Y+++LC+FKEQL
Sbjct: 187 DQLPRIDAQLAQSQHVVAKYSALGAAA----QGLVGDDK-ELDQFMTHYVLLLCSFKEQL 241
Query: 124 QQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH- 182
QQHVRVHA+EAVM C EIE +LQ+LTGVS GEG GATMSDDED +Q SD++
Sbjct: 242 QQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDED--------EQVESDANM 293
Query: 183 -----DLMGFGPLLPTETERSLMERVRQELKIELKQ 213
D++GFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 294 FDGGLDVLGFGPLIPTESERSLMERVRQELKHELKQ 329
>gi|79328660|ref|NP_001031938.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
gi|332006031|gb|AED93414.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
Length = 419
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 148/216 (68%), Gaps = 23/216 (10%)
Query: 8 VMGSSSSGGGGGGGDVSGHHDQTATVQLI----KAEIASHPLYEQLLAAHVSCLRVATPI 63
+ G +GGG D G V KAEI SHPLYEQLL+AHV+CLR+ATP+
Sbjct: 127 IQGEMKTGGGENKNDGGGATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPV 186
Query: 64 DQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
DQLP IDAQLAQS HV+ Y +L A L ++ ELD F+ Y+++LC+FKEQL
Sbjct: 187 DQLPRIDAQLAQSQHVVAKYSALGAAA----QGLVGDDK-ELDQFMTHYVLLLCSFKEQL 241
Query: 124 QQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH- 182
QQHVRVHA+EAVM C EIE +LQ+LTGVS GEG GATMSDDED +Q SD++
Sbjct: 242 QQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDED--------EQVESDANM 293
Query: 183 -----DLMGFGPLLPTETERSLMERVRQELKIELKQ 213
D++GFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 294 FDGGLDVLGFGPLIPTESERSLMERVRQELKHELKQ 329
>gi|21539535|gb|AAM53320.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
gi|23197862|gb|AAN15458.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
Length = 306
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 147/216 (68%), Gaps = 23/216 (10%)
Query: 8 VMGSSSSGGGGGGGDVSGHHDQTATVQLI----KAEIASHPLYEQLLAAHVSCLRVATPI 63
+ G +GGG D G V KAEI SHPLYEQLL+AHV+CLR+ATP+
Sbjct: 2 IQGEMKTGGGENKNDGGGATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPV 61
Query: 64 DQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
DQLP IDAQLAQS HV+ Y +L A + +ELD F+ Y+++LC+FKEQL
Sbjct: 62 DQLPRIDAQLAQSQHVVAKYSALGAAAQG-----LVGDDKELDQFMTHYVLLLCSFKEQL 116
Query: 124 QQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH- 182
QQHVRVHA+EAVM C EIE +LQ+LTGVS GEG GATMSDDED +Q SD++
Sbjct: 117 QQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDED--------EQVESDANM 168
Query: 183 -----DLMGFGPLLPTETERSLMERVRQELKIELKQ 213
D++GFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 169 FDGGLDVLGFGPLIPTESERSLMERVRQELKHELKQ 204
>gi|30683467|ref|NP_196667.2| homeobox protein knotted-1-like 4 [Arabidopsis thaliana]
gi|73915316|sp|P48001.3|KNAT4_ARATH RecName: Full=Homeobox protein knotted-1-like 4; AltName:
Full=Protein KNAT4
gi|26451634|dbj|BAC42914.1| putative homeobox protein knotted-1 like4 KNAT4 [Arabidopsis
thaliana]
gi|332004247|gb|AED91630.1| homeobox protein knotted-1-like 4 [Arabidopsis thaliana]
Length = 393
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 140/183 (76%), Gaps = 19/183 (10%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI SHPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS +V+ Y +L+ A
Sbjct: 124 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAA-----QG 178
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
L + +ELD+F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+ TGVS GEG
Sbjct: 179 LLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEG 238
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSH------DLMGFGPLLPTETERSLMERVRQELKIE 210
TGATMS+DED +Q SD+H D +GFGPL+PTE+ERSLMERVRQELK E
Sbjct: 239 TGATMSEDED--------EQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHE 290
Query: 211 LKQ 213
LKQ
Sbjct: 291 LKQ 293
>gi|1045044|emb|CAA63131.1| KNAT4 homeobox protein [Arabidopsis thaliana]
Length = 393
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 140/183 (76%), Gaps = 19/183 (10%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI SHPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS +V+ Y +L+ A
Sbjct: 124 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAA-----QG 178
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
L + +ELD+F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+ TGVS GEG
Sbjct: 179 LLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEG 238
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSH------DLMGFGPLLPTETERSLMERVRQELKIE 210
TGATMS+DED +Q SD+H D +GFGPL+PTE+ERSLMERVRQELK E
Sbjct: 239 TGATMSEDED--------EQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHE 290
Query: 211 LKQ 213
LKQ
Sbjct: 291 LKQ 293
>gi|9795158|emb|CAC03454.1| HOMEOBOX PROTEIN KNOTTED-1 LIKE 4 (KNAT4) [Arabidopsis thaliana]
Length = 419
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 140/183 (76%), Gaps = 19/183 (10%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI SHPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS +V+ Y +L+ A
Sbjct: 124 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAA-----QG 178
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
L + +ELD+F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+ TGVS GEG
Sbjct: 179 LLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEG 238
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSH------DLMGFGPLLPTETERSLMERVRQELKIE 210
TGATMS+DED +Q SD+H D +GFGPL+PTE+ERSLMERVRQELK E
Sbjct: 239 TGATMSEDED--------EQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHE 290
Query: 211 LKQ 213
LKQ
Sbjct: 291 LKQ 293
>gi|312283117|dbj|BAJ34424.1| unnamed protein product [Thellungiella halophila]
Length = 388
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 140/183 (76%), Gaps = 18/183 (9%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI SHPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQ+ +V+ Y SL+ A
Sbjct: 118 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQTQNVVAKYSSLEAAA----QG 173
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
L + +ELD+F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+ TGVS GEG
Sbjct: 174 LIAGDEKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEG 233
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSH------DLMGFGPLLPTETERSLMERVRQELKIE 210
TGATMS+DED +Q SD+H D +GFGPL+PTE+ERSLMERVRQELK E
Sbjct: 234 TGATMSEDED--------EQVDSDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHE 285
Query: 211 LKQ 213
LKQ
Sbjct: 286 LKQ 288
>gi|336112105|gb|AEI17371.1| Knox-like protein 3 [Capsella rubella]
Length = 391
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 139/183 (75%), Gaps = 19/183 (10%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI SHPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS +V+ Y +L A
Sbjct: 122 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLDTA-----QG 176
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
L + +ELD+F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+ TGVS GEG
Sbjct: 177 LLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEG 236
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSH------DLMGFGPLLPTETERSLMERVRQELKIE 210
TGATMS+DED +Q SD+H D +GFGPL+PTE+ERSLMERVRQELK E
Sbjct: 237 TGATMSEDED--------EQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHE 288
Query: 211 LKQ 213
LKQ
Sbjct: 289 LKQ 291
>gi|356563910|ref|XP_003550200.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 405
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 143/196 (72%), Gaps = 13/196 (6%)
Query: 19 GGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHH 78
GGGD + + K EI HPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS +
Sbjct: 132 GGGDAV-----SWQIGRCKTEILQHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQN 186
Query: 79 VLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGC 138
V+ Y H+ + +ELD F++ Y+++LC+FKEQLQQHVRVHA+EAVM C
Sbjct: 187 VVAKYAVF-------GHNNIVADDKELDQFMSHYVLLLCSFKEQLQQHVRVHAMEAVMAC 239
Query: 139 REIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETER 197
E+E +LQ+LTGVS GEGTGATMSDDE+D + D +L + D D MGFGPL+PTE+ER
Sbjct: 240 WELEQSLQSLTGVSPGEGTGATMSDDENDQVDSDANLFDCSFDGADSMGFGPLVPTESER 299
Query: 198 SLMERVRQELKIELKQ 213
SLMERVRQELK ELKQ
Sbjct: 300 SLMERVRQELKHELKQ 315
>gi|297808523|ref|XP_002872145.1| hypothetical protein ARALYDRAFT_489374 [Arabidopsis lyrata subsp.
lyrata]
gi|297317982|gb|EFH48404.1| hypothetical protein ARALYDRAFT_489374 [Arabidopsis lyrata subsp.
lyrata]
Length = 429
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/178 (65%), Positives = 139/178 (78%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI SHPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS HV+ Y +L A
Sbjct: 158 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAA----QG 213
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
L ++ ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS GEG
Sbjct: 214 LVGDDK-ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 272
Query: 157 TGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
GATMSDDED+ + D +L S D++GFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 273 MGATMSDDEDEQVESDANL---FDGSLDVLGFGPLVPTESERSLMERVRQELKHELKQ 327
>gi|336112103|gb|AEI17370.1| knox-like protein 3 [Arabidopsis lyrata]
Length = 441
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 147/211 (69%), Gaps = 13/211 (6%)
Query: 8 VMGSSSSGGGGGGGDVSGHHDQTATVQLI----KAEIASHPLYEQLLAAHVSCLRVATPI 63
+ G SGGG D G V KAEI SHPLYEQLL+AHV+CLR+ATP+
Sbjct: 125 IQGDMKSGGGENKNDGGGAAAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPV 184
Query: 64 DQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
DQLP IDAQLAQS HV+ Y +L A + +ELD F+ Y+++LC+FKEQL
Sbjct: 185 DQLPRIDAQLAQSQHVVAKYSALGAAAQG-----LVGDDKELDQFMTHYVLLLCSFKEQL 239
Query: 124 QQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSH 182
QQHVRVHA+EAVM C EIE +LQ+LTGVS GEG GATMSDDED+ + D +L S
Sbjct: 240 QQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDEDEQVESDANL---FDGSL 296
Query: 183 DLMGFGPLLPTETERSLMERVRQELKIELKQ 213
D++GFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 297 DVLGFGPLVPTESERSLMERVRQELKHELKQ 327
>gi|312282373|dbj|BAJ34052.1| unnamed protein product [Thellungiella halophila]
Length = 434
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 147/209 (70%), Gaps = 26/209 (12%)
Query: 11 SSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLID 70
S + GG G VS + + KAEI SHPLYEQLL+AHV+CLR+ATP+DQLP ID
Sbjct: 144 SKNDGGAAAEGVVSWQNARH------KAEILSHPLYEQLLSAHVACLRIATPVDQLPRID 197
Query: 71 AQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVH 130
AQLAQS HV+ Y +L L ++ ELD F+ Y+++LC+FKEQLQQHVRVH
Sbjct: 198 AQLAQSQHVVAKYSAL-----GAGQGLVADDK-ELDQFMTHYVLLLCSFKEQLQQHVRVH 251
Query: 131 AVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH------DL 184
A+EAVM C EIE +LQ+LTGVS GEG GATMSDDED +Q SD++ D+
Sbjct: 252 AMEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDED--------EQVESDANMFDGGLDV 303
Query: 185 MGFGPLLPTETERSLMERVRQELKIELKQ 213
+GFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 304 LGFGPLIPTESERSLMERVRQELKHELKQ 332
>gi|132424655|gb|ABO33480.1| class II KNOX homeobox transcription factor [Medicago truncatula]
Length = 439
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 151/210 (71%), Gaps = 14/210 (6%)
Query: 5 SLGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPID 64
S G+ G S G GG V+ + KAEI +HPLYEQLL+AHV+CLR+ATP+D
Sbjct: 148 SDGLGGKSEVAVVGDGGLVNWQ------MGRWKAEIMAHPLYEQLLSAHVACLRIATPVD 201
Query: 65 QLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQ 124
QLP IDAQLAQS +V+ Y + Q + + + +ELD+F++ Y+++LC+FKEQLQ
Sbjct: 202 QLPRIDAQLAQSQNVVAKYSAFGQ------NIGAGVDDKELDHFMSHYVLLLCSFKEQLQ 255
Query: 125 QHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSL-DQSASDSH 182
QHVRVHA+EAVM C EIE +LQ+LTGVS GEGTGATMSDDED+ + D +L D S
Sbjct: 256 QHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDEDEQVDSDANLFDGSFDGGA 315
Query: 183 DLMGFGPLLPTETERSLMERVRQELKIELK 212
D MGFGPL+PTE ERSLMERVRQELK ELK
Sbjct: 316 DNMGFGPLIPTENERSLMERVRQELKHELK 345
>gi|297807137|ref|XP_002871452.1| KNAT4 homeobox protein [Arabidopsis lyrata subsp. lyrata]
gi|297317289|gb|EFH47711.1| KNAT4 homeobox protein [Arabidopsis lyrata subsp. lyrata]
Length = 391
Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/178 (64%), Positives = 139/178 (78%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI SHPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS +V+ Y +L+ A
Sbjct: 122 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAA-----QG 176
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
L + +ELD+F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+ TGVS GEG
Sbjct: 177 LLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEG 236
Query: 157 TGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMS+DED+ + D L S D +GFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 237 TGATMSEDEDEQVESDAPL---FDGSLDGLGFGPLVPTESERSLMERVRQELKHELKQ 291
>gi|356556581|ref|XP_003546603.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
3-like [Glycine max]
Length = 369
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/201 (58%), Positives = 141/201 (70%), Gaps = 9/201 (4%)
Query: 15 GGGGGGGDVSGHHDQTATVQLI--KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQ 72
GGGG G D + + L KA+I HPLY+QLL+AHVSCLR+ATP+DQLP IDAQ
Sbjct: 74 GGGGSGMDRNRTESNSEPDDLAEYKADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQ 133
Query: 73 LAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAV 132
L QS V+ Y + N N + + +ELD F+ Y+I+LC FKEQLQQHVRVHA+
Sbjct: 134 LQQSQRVVDKYSGI----GNGNGVV---DDKELDQFMTHYVILLCAFKEQLQQHVRVHAM 186
Query: 133 EAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLP 192
EAVM C E+E +LQ+LTGVS GEGTGATMSDDE+D + + D D + FGPL+P
Sbjct: 187 EAVMACWELEQSLQSLTGVSPGEGTGATMSDDEEDQAESNANXSRSMDGADSLSFGPLVP 246
Query: 193 TETERSLMERVRQELKIELKQ 213
TETERSLMERVRQELK ELKQ
Sbjct: 247 TETERSLMERVRQELKHELKQ 267
>gi|168199344|gb|ABZ10962.1| class 1 knox protein [Kalanchoe x houghtonii]
Length = 412
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 137/179 (76%), Gaps = 9/179 (5%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
KAEI SHPLYEQLLAAHVSCLR+ATP+D+LP I+AQLAQSH+++ Y Q + ++
Sbjct: 139 FKAEILSHPLYEQLLAAHVSCLRIATPVDKLPQIEAQLAQSHNLVAKYADAVQGSCVDD- 197
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
+ELD F+ QY+++L +FKEQLQQHVRVHA+EAVM C E+E LQ LTGVS GE
Sbjct: 198 -------EELDQFMTQYVLLLNSFKEQLQQHVRVHAMEAVMACWELEQALQNLTGVSPGE 250
Query: 156 GTGATMSDDED-DLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
GTGATMSDDED + ++ + +D D MGFGPL+PT++ERSLMERVRQELK ELKQ
Sbjct: 251 GTGATMSDDEDYRAEGELNMFEGGTDCSDNMGFGPLVPTDSERSLMERVRQELKHELKQ 309
>gi|167178668|gb|ABZ10965.1| class 1 knox protein [Kalanchoe x houghtonii]
Length = 409
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 136/180 (75%), Gaps = 10/180 (5%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
KAEI SHPLY+QLLAAHVSCLR+ATP+DQLP IDAQLAQS ++ Y + Q +
Sbjct: 136 FKAEILSHPLYDQLLAAHVSCLRIATPVDQLPRIDAQLAQSQNLAAKYAAAVQGS----- 190
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
++ +LD F+ QY+++L +FK+QLQQHVRVHA+EAVM C ++E LQ LTGVS GE
Sbjct: 191 --CADDKDQLDQFMTQYVLLLSSFKDQLQQHVRVHAMEAVMACWDLEQALQNLTGVSPGE 248
Query: 156 GTGATMSDDEDDLHMD--FSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
GTGATMSDDE+D H D ++ S D D MGFGPL+PT++ERSLMERVRQELK ELKQ
Sbjct: 249 GTGATMSDDEND-HADGETNMFDSGMDCSDSMGFGPLVPTDSERSLMERVRQELKHELKQ 307
>gi|3116212|dbj|BAA25921.1| NTH23 [Nicotiana tabacum]
Length = 422
Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 120/200 (60%), Positives = 145/200 (72%), Gaps = 18/200 (9%)
Query: 15 GGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLA 74
GGGG G ++ Q A KAEI +HPL+EQLL+AHV+CLR+ATP+DQLP IDAQLA
Sbjct: 150 GGGGTDGILNW---QNAGY---KAEILAHPLFEQLLSAHVACLRIATPVDQLPRIDAQLA 203
Query: 75 QSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEA 134
QS V+ Y +L Q ++ +ELD FL Y+++LC FKEQLQQHVRVHA+EA
Sbjct: 204 QSQQVVAKYSTLGQNIGDD---------KELDQFLTHYVLLLCPFKEQLQQHVRVHAMEA 254
Query: 135 VMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPT 193
VM C EIE +LQ+LTGVS GEGTGATMSDDEDD + + +L + D HD M FG LPT
Sbjct: 255 VMACWEIEQSLQSLTGVSPGEGTGATMSDDEDDQVDSEANLFDGSLDGHDGMAFG--LPT 312
Query: 194 ETERSLMERVRQELKIELKQ 213
E+ERSLMERVRQELK +LKQ
Sbjct: 313 ESERSLMERVRQELKHDLKQ 332
>gi|167178664|gb|ABZ10963.1| class 1 knox protein [Kalanchoe x houghtonii]
Length = 408
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 117/179 (65%), Positives = 138/179 (77%), Gaps = 6/179 (3%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KAE+ SHPLYEQLL+AHVSCLR+ATP+DQLP IDAQL+QS HV+ Y L Q N
Sbjct: 145 LKAEVLSHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLSQSQHVVSKYSGLGQGN----Q 200
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
L ++ ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGV+ GE
Sbjct: 201 GLMGDDK-ELDQFMTNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVAPGE 259
Query: 156 GTGATMSDDEDDLHMDFS-LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
GTGATMSDDEDD + L D D MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 260 GTGATMSDDEDDQVDSDANLYDGGLDGLDTMGFGPLIPTESERSLMERVRQELKHELKQ 318
>gi|388500714|gb|AFK38423.1| unknown [Medicago truncatula]
Length = 342
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 140/188 (74%), Gaps = 12/188 (6%)
Query: 29 QTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQ 88
+T ++ KAEI HPLY+QLL+AHVSCLR+ATP+DQLP IDAQL Q+ VL+ Y S+
Sbjct: 63 ETEELREYKAEILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQAQRVLQKYSSVGI 122
Query: 89 ANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
N + P +ELD+F+ Y+++LC FKEQLQQHVRVHA+EAVM C ++E +LQ+L
Sbjct: 123 GN------MDP---KELDHFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWDLEQSLQSL 173
Query: 149 TGVSLGEGTGATMSDDEDDL---HMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQ 205
TGVS GEGTGATMSDDED+ + + S+ D D +GFGPL+PTETERSLMERVR
Sbjct: 174 TGVSSGEGTGATMSDDEDEQAESNARLYNEGSSLDGVDTLGFGPLVPTETERSLMERVRL 233
Query: 206 ELKIELKQ 213
ELK ELKQ
Sbjct: 234 ELKHELKQ 241
>gi|356530621|ref|XP_003533879.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 339
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/178 (62%), Positives = 134/178 (75%), Gaps = 8/178 (4%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA+I HPLY+QLL+AHVSCLR+ATP+DQLP IDAQL QS V+ Y L N N
Sbjct: 67 KADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVVDKYSGL----GNGNGV 122
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ + +ELD F+ Y+I+LC FKEQLQQHVRVHA+EAVM C E+E +LQ+LTGVS GEG
Sbjct: 123 V---DDKELDQFMTHYVILLCAFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEG 179
Query: 157 TGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSD+E+D + +L + D D + FGPL+PTETERSLMERVRQELK ELKQ
Sbjct: 180 TGATMSDNEEDQAESNANLYEGGMDGADSLSFGPLVPTETERSLMERVRQELKHELKQ 237
>gi|357478479|ref|XP_003609525.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|355510580|gb|AES91722.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
Length = 332
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 140/188 (74%), Gaps = 12/188 (6%)
Query: 29 QTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQ 88
+T ++ KAEI HPLY+QLL+AHVSCLR+ATP+DQLP IDAQL Q+ VL+ Y S+
Sbjct: 63 ETEELREYKAEILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQAQRVLQKYSSVGI 122
Query: 89 ANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
N + P +ELD+F+ Y+++LC FKEQLQQHVRVHA+EAVM C ++E +LQ+L
Sbjct: 123 GN------MDP---KELDHFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWDLEQSLQSL 173
Query: 149 TGVSLGEGTGATMSDDEDDL---HMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQ 205
TGVS GEGTGATMSDDED+ + + S+ D D +GFGPL+PTETERSLMERVR
Sbjct: 174 TGVSSGEGTGATMSDDEDEQAESNARLYNEGSSLDGVDTLGFGPLVPTETERSLMERVRL 233
Query: 206 ELKIELKQ 213
ELK ELKQ
Sbjct: 234 ELKHELKQ 241
>gi|224142451|ref|XP_002324571.1| predicted protein [Populus trichocarpa]
gi|222866005|gb|EEF03136.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 130/178 (73%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI HP YEQLLAAHV+CLR+ATP+DQL ID QLA+S V+ Y + H
Sbjct: 26 KAEILGHPFYEQLLAAHVACLRIATPVDQLARIDTQLARSQDVIAKYSGV-----GCGHV 80
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ + +ELD F+ Y ++LC+FK+QLQQHVRVHA+EAVM C E+E +LQ+LTGVS GEG
Sbjct: 81 V---DEKELDQFMTHYALLLCSFKDQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEG 137
Query: 157 TGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDEDD D + + D D MGFGPL+PTETERSLMERVRQELK E KQ
Sbjct: 138 TGATMSDDEDDQAESDTNFNDGNLDGLDTMGFGPLVPTETERSLMERVRQELKHEFKQ 195
>gi|168199347|gb|ABZ10964.1| class 1 knox protein [Kalanchoe x houghtonii]
Length = 384
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/178 (62%), Positives = 134/178 (75%), Gaps = 12/178 (6%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAE+ SHPLYEQLL+AHVSCLR+ATP+DQLP IDAQL QS V+ Y ++ N ++
Sbjct: 119 KAEVLSHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLVQSQSVVAKYLAVGPGNLDD--- 175
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E +LQ LTGVS GEG
Sbjct: 176 ------KELDQFMTNYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQTLTGVSPGEG 229
Query: 157 TGATMSDDEDDLHMDFS--LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELK 212
G TMSDDED+ HMD L + DS D MGFGPL+ T++ERSLMERVRQELK ELK
Sbjct: 230 NGETMSDDEDN-HMDSDTHLFDGSLDSPDSMGFGPLILTDSERSLMERVRQELKHELK 286
>gi|11463943|dbj|BAB18585.1| CRKNOX3 [Ceratopteris richardii]
Length = 436
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/178 (62%), Positives = 136/178 (76%), Gaps = 6/178 (3%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I HPLY+QLLAAHV+CLR+ATP+DQLP IDAQ+AQ+ ++ Y L Q N+
Sbjct: 173 LKADITMHPLYDQLLAAHVACLRIATPVDQLPRIDAQIAQASQIVAKYAVLGQ-----NN 227
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
L E+ ELD F+A Y+++LCTFKEQLQQHV+VHA+EAVM C E+E +L LTGVS GE
Sbjct: 228 LLVGEEKDELDQFMAHYVLLLCTFKEQLQQHVKVHAMEAVMACWELEQSLLTLTGVSPGE 287
Query: 156 GTGATMS-DDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELK 212
GTGATMS DD+D D S+ A D+HD FGPL+PTETER+LMERVRQELK ELK
Sbjct: 288 GTGATMSDDDDDPAESDPSIYDPAFDTHDSGAFGPLIPTETERTLMERVRQELKNELK 345
>gi|356548471|ref|XP_003542625.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 345
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 136/178 (76%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA+I HPLY+QLL+AHVSCLR+ATP+DQLP IDAQL QS V+ Y +L A+N
Sbjct: 75 KADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVVEKYSAL--AHN----- 127
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ +ELD F+ Y+++LC FKEQLQQHVRVHA+EAVM C ++E +LQ+LTGVS GEG
Sbjct: 128 -GVVDEKELDQFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEG 186
Query: 157 TGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDEDD + +L + + D + +GFGPL+PTE+ERSLMERVR ELK ELKQ
Sbjct: 187 TGATMSDDEDDQAESNANLYEGSLDGGETLGFGPLVPTESERSLMERVRHELKHELKQ 244
>gi|356562896|ref|XP_003549704.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 344
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 136/178 (76%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA+I HPLY+QLL+AHVSCLR+ATP+DQLP IDAQL QS V+ Y +L A+N
Sbjct: 74 KADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVVEKYSAL--AHN----- 126
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ +ELD F+ Y+++LC FKEQLQQHVRVHA+EAVM C ++E +LQ+LTGVS GEG
Sbjct: 127 -GVVDEKELDQFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEG 185
Query: 157 TGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDEDD + +L + + D + +GFGPL+PTE+ERSLMERVR ELK ELKQ
Sbjct: 186 TGATMSDDEDDQAESNANLYEGSLDGGETLGFGPLVPTESERSLMERVRHELKHELKQ 243
>gi|356552494|ref|XP_003544602.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 407
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/178 (64%), Positives = 138/178 (77%), Gaps = 8/178 (4%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI HPLYEQLL+AHVSCLR+ATP+DQLP IDAQLAQS +V+ Y + H+
Sbjct: 147 KAEILQHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYAAF-------GHN 199
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ +ELD F++ Y+++LC+FKEQLQQHVRVHA+EAVM C +IE +LQ+LTGVS GEG
Sbjct: 200 NIVADDKELDQFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWDIEQSLQSLTGVSPGEG 259
Query: 157 TGATMSDDEDDLHMDFS-LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDEDD + L S+ D D MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 260 TGATMSDDEDDQVDSDANLFDSSFDGADGMGFGPLVPTESERSLMERVRQELKHELKQ 317
>gi|357466089|ref|XP_003603329.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|132424659|gb|ABO33482.1| class II KNOX homeobox transcription factor [Medicago truncatula]
gi|355492377|gb|AES73580.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
Length = 371
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 140/183 (76%), Gaps = 14/183 (7%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA---NNNN 93
K EI +HPLYEQLL+AHVSCLR+ATP+DQLP IDAQLA+S +V+ Y +L Q +N++
Sbjct: 107 KGEIMAHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAESQNVVAKYSALGQQGMLDNDD 166
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
N ++LD+F++ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS
Sbjct: 167 N--------KQLDHFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP 218
Query: 154 GEGTGATMSDDEDD-LHMDFSLDQSASDSHD--LMGFGPLLPTETERSLMERVRQELKIE 210
GEGTGATMS+DED+ + D +L D D + GFGPL+ TE ERSLMERVR ELK E
Sbjct: 219 GEGTGATMSEDEDEQVDSDVNLFDGGLDGSDNSMGGFGPLVLTENERSLMERVRHELKHE 278
Query: 211 LKQ 213
LKQ
Sbjct: 279 LKQ 281
>gi|357466091|ref|XP_003603330.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|355492378|gb|AES73581.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
Length = 373
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 111/183 (60%), Positives = 140/183 (76%), Gaps = 14/183 (7%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA---NNNN 93
K EI +HPLYEQLL+AHVSCLR+ATP+DQLP IDAQLA+S +V+ Y +L Q +N++
Sbjct: 107 KGEIMAHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAESQNVVAKYSALGQQGMLDNDD 166
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
N ++LD+F++ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS
Sbjct: 167 N--------KQLDHFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP 218
Query: 154 GEGTGATMSDDEDD-LHMDFSLDQSASDSHD--LMGFGPLLPTETERSLMERVRQELKIE 210
GEGTGATMS+DED+ + D +L D D + GFGPL+ TE ERSLMERVR ELK E
Sbjct: 219 GEGTGATMSEDEDEQVDSDVNLFDGGLDGSDNSMGGFGPLVLTENERSLMERVRHELKHE 278
Query: 211 LKQ 213
LKQ
Sbjct: 279 LKQ 281
>gi|210160856|gb|ACJ09316.1| KNAT3-like transcription factor [Juglans nigra]
Length = 482
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 137/180 (76%), Gaps = 12/180 (6%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI SHPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS +V+ Y +L A
Sbjct: 209 KAEILSHPLYEQLLSAHVTCLRIATPVDQLPRIDAQLAQSENVVAKYSALGHA------- 261
Query: 97 LSPH---ERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
+P + +ELD FL Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS
Sbjct: 262 -TPSMVGDDKELDQFLTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP 320
Query: 154 GEGTGATMSDDEDDLHMDFS-LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELK 212
GEGTGATMSDD+D+ + L + D MGFGPL+PTETERSLMERVRQELK ELK
Sbjct: 321 GEGTGATMSDDDDEQVDSDANLFDGGLEGPDSMGFGPLIPTETERSLMERVRQELKHELK 380
>gi|449455557|ref|XP_004145519.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
gi|449485171|ref|XP_004157089.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
Length = 455
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 146/206 (70%), Gaps = 27/206 (13%)
Query: 16 GGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQ 75
G GG G ++ H + KAEI +HPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQ
Sbjct: 177 GAGGEGVLNWQHAR------YKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQ 230
Query: 76 SHHVLRSYGSLQQANNNNNHSLSPH---ERQELDNFLAQYLIVLCTFKEQLQQHVRVHAV 132
S +V+ Y +L HS P + +ELD F+ Y+++LC+FKEQLQQHVRVHA+
Sbjct: 231 SQNVVAKYSAL-------GHSAPPSMVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAM 283
Query: 133 EAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLH------MDFSLDQSASDSHDLMG 186
EAVM C +IE +LQ+LTGVS GEGTGATMSDD+DD D SLD D MG
Sbjct: 284 EAVMACWDIEQSLQSLTGVSPGEGTGATMSDDDDDQVDSDANVFDGSLDGP-----DTMG 338
Query: 187 FGPLLPTETERSLMERVRQELKIELK 212
FGPL+PTE+ERSLMERVRQELK ELK
Sbjct: 339 FGPLIPTESERSLMERVRQELKHELK 364
>gi|255548818|ref|XP_002515465.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223545409|gb|EEF46914.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 456
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 114/178 (64%), Positives = 136/178 (76%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI SHPLY+QLL+AHV+CLR+ATP+DQLP IDAQLAQS HV+ Y +L Q ++
Sbjct: 167 KAEILSHPLYDQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGQGLVADD-- 224
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y ++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS GEG
Sbjct: 225 ------KELDQFMTHYFLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 278
Query: 157 TGATMSDDEDDLHMDFS-LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDD+DD + L + D D MGFGPL+PTE+ERSLMERVR ELK ELKQ
Sbjct: 279 TGATMSDDDDDQVDSDANLFDPSLDGADTMGFGPLIPTESERSLMERVRHELKHELKQ 336
>gi|302771457|ref|XP_002969147.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300163652|gb|EFJ30263.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 287
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 131/180 (72%), Gaps = 7/180 (3%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA++ +HPLYEQLL+AH+SCLR ATP+DQLP IDAQLA S V Y L N
Sbjct: 23 LKADLVTHPLYEQLLSAHISCLRTATPVDQLPKIDAQLAHSSQVAAKYSILA----TNEQ 78
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
LS ++ E++ F+A Y+ +L +FK+QLQQHVRVHA+EAV+ C E+E +L LTGVS GE
Sbjct: 79 GLS-KDKDEVNEFMAHYVTLLRSFKDQLQQHVRVHAMEAVVACWELEQSLFTLTGVSPGE 137
Query: 156 GTGATMSDDEDDLHMDFS--LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
GTGATMS+DEDD D + D HD GFGPL+PTETER+LMERVR ELKIELKQ
Sbjct: 138 GTGATMSEDEDDQQADSDSGYYDAGMDGHDFTGFGPLIPTETERTLMERVRHELKIELKQ 197
>gi|111038269|gb|ABH03531.1| class II knotted-like homeobox protein [Prunus persica]
gi|215983122|gb|ACJ71731.1| class II knotted-like homeobox transcription factor [Prunus
persica]
Length = 448
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 137/178 (76%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI +HPLYE LL+AHV+CLR+ATP+DQLP IDAQLAQS +V+ Y +L ++
Sbjct: 177 KAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGHGMVGDD-- 234
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS GEG
Sbjct: 235 ------KELDQFMRHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 288
Query: 157 TGATMSDDEDDLHMDFS-LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDEDD + L + + HD MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 289 TGATMSDDEDDQVDSDANLFDGSMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQ 346
>gi|302784286|ref|XP_002973915.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300158247|gb|EFJ24870.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 287
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 131/180 (72%), Gaps = 7/180 (3%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA++ +HPLYEQLL+AH+SCLR ATP+DQLP IDAQLA S V Y L N
Sbjct: 23 LKADLVTHPLYEQLLSAHISCLRTATPVDQLPKIDAQLAHSSQVAAKYSILAA----NEQ 78
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
LS ++ E++ F+A Y+ +L +FK+QLQQHVRVHA+EAV+ C E+E +L LTGVS GE
Sbjct: 79 GLS-KDKDEVNEFMAHYVTLLRSFKDQLQQHVRVHAMEAVVACWELEQSLFTLTGVSPGE 137
Query: 156 GTGATMSDDEDDLHMDFS--LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
GTGATMS+DEDD D + D HD GFGPL+PTETER+LMERVR ELKIELKQ
Sbjct: 138 GTGATMSEDEDDQQADSDSGYYDAGMDGHDFTGFGPLIPTETERTLMERVRHELKIELKQ 197
>gi|373938269|dbj|BAL46506.1| Knotted1-like homeobox protein [Diospyros kaki]
Length = 438
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 145/205 (70%), Gaps = 14/205 (6%)
Query: 17 GGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQS 76
GGG G ++ + + KAEI +HPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS
Sbjct: 165 GGGDGILNWQNAK------YKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS 218
Query: 77 HHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVM 136
HV+ Y +L + N +ELD F+ Y+++LC+FKEQLQQHVRVH +EAVM
Sbjct: 219 QHVVAKYSALGGPTSIGND-------KELDQFMTHYVLLLCSFKEQLQQHVRVHVMEAVM 271
Query: 137 GCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFS-LDQSASDSHDLMGFGPLLPTET 195
C EIE +LQ+LTG+ GEGTGATMSDD+DD + L + D D M FGPL+PTE+
Sbjct: 272 ACWEIEQSLQSLTGIPPGEGTGATMSDDDDDQVDSDTNLFDANLDGPDSMNFGPLIPTES 331
Query: 196 ERSLMERVRQELKIELKQVMTTYIY 220
ERSLMERVRQELK ELK+V ++
Sbjct: 332 ERSLMERVRQELKHELKRVTRRKLW 356
>gi|302398821|gb|ADL36705.1| HD domain class transcription factor [Malus x domestica]
Length = 437
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 136/178 (76%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI +HPLYE LL+AHV+CLR+ATP+DQLP IDAQLA S +V+ Y +L ++
Sbjct: 178 KAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAXSQNVVAKYSALGNGMVGDD-- 235
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS GEG
Sbjct: 236 ------KELDQFMRHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 289
Query: 157 TGATMSDDEDDLHMDFS-LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDEDD + L + + HD MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 290 TGATMSDDEDDQVDSDANLFDGSMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQ 347
>gi|302398827|gb|ADL36708.1| HD domain class transcription factor [Malus x domestica]
Length = 427
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 135/178 (75%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI +HPLYE LL+AHV+CLR+ATP+DQLP IDAQLAQS +V+ Y +L ++
Sbjct: 168 KAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGNGMVGDD-- 225
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS GEG
Sbjct: 226 ------KELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 279
Query: 157 TGATMSDDEDDLHMDFS-LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
T ATMSDDEDD + L + HD MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 280 TSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQ 337
>gi|3023961|sp|O04136.1|KNAP3_MALDO RecName: Full=Homeobox protein knotted-1-like 3; AltName:
Full=KNAP3
gi|1946222|emb|CAA96512.1| knotted1-like homeobox protein [Malus x domestica]
Length = 427
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 135/178 (75%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI +HPLYE LL+AHV+CLR+ATP+DQLP IDAQLAQS +V+ Y +L ++
Sbjct: 168 KAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGNGMVGDD-- 225
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS GEG
Sbjct: 226 ------KELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 279
Query: 157 TGATMSDDEDDLHMDFS-LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
T ATMSDDEDD + L + HD MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 280 TSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQ 337
>gi|224143241|ref|XP_002324890.1| predicted protein [Populus trichocarpa]
gi|222866324|gb|EEF03455.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/178 (61%), Positives = 138/178 (77%), Gaps = 7/178 (3%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA+I +HPLY+QLL+AHV+CLR+ATP+DQLP IDAQLAQS V+ Y +L ++
Sbjct: 153 KADILTHPLYDQLLSAHVACLRIATPVDQLPRIDAQLAQSQQVVTKYSAL-----GSHQG 207
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
L P ++ ELD F+ Y ++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS GEG
Sbjct: 208 LVPDDK-ELDQFMTHYFLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 266
Query: 157 TGATMSDDEDDLHMDFS-LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDD++D + L + + D +GFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 267 TGATMSDDDEDQVDSDANLFVGSLEGADTLGFGPLVPTESERSLMERVRQELKHELKQ 324
>gi|449527309|ref|XP_004170654.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
Length = 461
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 145/207 (70%), Gaps = 11/207 (5%)
Query: 6 LGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQ 65
+ V + G GG ++ + Q KAEI +HPLYEQLL+AHV+CLR+ATP+DQ
Sbjct: 164 VAVESDCNEGARGGEAAMNWQNAQ------FKAEILAHPLYEQLLSAHVACLRIATPVDQ 217
Query: 66 LPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
LP ID+QL++S +V Y SL N + S+ + + ELD F+ Y+ +LC+FKEQLQQ
Sbjct: 218 LPRIDSQLSRSQNVAAKYSSL----GNGSQSIVSNGK-ELDQFMTHYVFLLCSFKEQLQQ 272
Query: 126 HVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLM 185
HVRVHA+EAV C EIE +LQ+LTGVS G GTGATMSDD++D ++ + + HD M
Sbjct: 273 HVRVHAMEAVYACWEIEQSLQSLTGVSPGVGTGATMSDDDEDQIDSDAMFDGSLEGHDTM 332
Query: 186 GFGPLLPTETERSLMERVRQELKIELK 212
GFGPL+PTE+ERSLMERVR ELK ELK
Sbjct: 333 GFGPLIPTESERSLMERVRHELKHELK 359
>gi|449441886|ref|XP_004138713.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
Length = 462
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 145/207 (70%), Gaps = 11/207 (5%)
Query: 6 LGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQ 65
+ V + G GG ++ + Q KAEI +HPLYEQLL+AHV+CLR+ATP+DQ
Sbjct: 164 VAVESDCNEGARGGEAAMNWQNAQ------FKAEILAHPLYEQLLSAHVACLRIATPVDQ 217
Query: 66 LPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
LP ID+QL++S +V Y SL N + S+ + + ELD F+ Y+ +LC+FKEQLQQ
Sbjct: 218 LPRIDSQLSRSQNVAAKYSSL----GNGSQSIVSNGK-ELDQFMTHYVFLLCSFKEQLQQ 272
Query: 126 HVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLM 185
HVRVHA+EAV C EIE +LQ+LTGVS G GTGATMSDD++D ++ + + HD M
Sbjct: 273 HVRVHAMEAVYACWEIEQSLQSLTGVSPGVGTGATMSDDDEDQIDSDAMFDGSLEGHDTM 332
Query: 186 GFGPLLPTETERSLMERVRQELKIELK 212
GFGPL+PTE+ERSLMERVR ELK ELK
Sbjct: 333 GFGPLIPTESERSLMERVRHELKHELK 359
>gi|221272018|sp|Q0J6N4.2|KNOSD_ORYSJ RecName: Full=Homeobox protein knotted-1-like 13; AltName:
Full=Homeobox protein OSH45
gi|1805618|dbj|BAA08553.1| OSH45 [Oryza sativa Japonica Group]
Length = 374
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/178 (61%), Positives = 133/178 (74%), Gaps = 10/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI +HPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS V+ Y +L A ++
Sbjct: 109 KAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAGDDG- 167
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E LQ+LTG S GEG
Sbjct: 168 ------RELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEG 221
Query: 157 TGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSD EDD + ++ + D D MGFG LPTE+ERSLMERVRQELK ELKQ
Sbjct: 222 TGATMSDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQ 277
>gi|1805617|dbj|BAA08552.1| OSH45 [Oryza sativa Japonica Group]
Length = 375
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/178 (61%), Positives = 133/178 (74%), Gaps = 10/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI +HPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS V+ Y +L A ++
Sbjct: 109 KAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAGDDG- 167
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E LQ+LTG S GEG
Sbjct: 168 ------RELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEG 221
Query: 157 TGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSD EDD + ++ + D D MGFG LPTE+ERSLMERVRQELK ELKQ
Sbjct: 222 TGATMSDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQ 277
>gi|289655990|gb|ADD14043.1| class 2 KNOTTED-like transcription factor KNOPE4 [Prunus persica]
Length = 358
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 146/211 (69%), Gaps = 12/211 (5%)
Query: 10 GSSSSGGGGGGGDVSGHHDQTATVQL-------IKAEIASHPLYEQLLAAHVSCLRVATP 62
G SS+ G ++SG+ + KA++ HPLYEQL++AHVSCLR+ATP
Sbjct: 63 GKSSNCSGRNRREISGYDGEEEEEDELECESARFKADLVGHPLYEQLVSAHVSCLRIATP 122
Query: 63 IDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQ 122
+DQLP ID QL QS V+ Y +L+ N + + +ELD F+ Y+++LC+FKEQ
Sbjct: 123 VDQLPRIDEQLVQSQRVVDKYSALRA-----NGDVQVMDEKELDLFMTNYVLLLCSFKEQ 177
Query: 123 LQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH 182
LQQHVRVHA+EAV+ C E++ +LQ+LTGVS GEGTGATMSDD+D + D + + D
Sbjct: 178 LQQHVRVHAMEAVIACWELDQSLQSLTGVSTGEGTGATMSDDDDQVDSDINSYDGSLDGP 237
Query: 183 DLMGFGPLLPTETERSLMERVRQELKIELKQ 213
D MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 238 DTMGFGPLVPTESERSLMERVRQELKHELKQ 268
>gi|126644759|gb|ABO26062.1| KNOPE4 [Prunus persica]
Length = 417
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 146/211 (69%), Gaps = 12/211 (5%)
Query: 10 GSSSSGGGGGGGDVSGHHDQTATVQL-------IKAEIASHPLYEQLLAAHVSCLRVATP 62
G SS+ G ++SG+ + KA++ HPLYEQL++AHVSCLR+ATP
Sbjct: 122 GKSSNCSGRNRREISGYDGEEEEEDELECESARFKADLVGHPLYEQLVSAHVSCLRIATP 181
Query: 63 IDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQ 122
+DQLP ID QL QS V+ Y +L+ N + + +ELD F+ Y+++LC+FKEQ
Sbjct: 182 VDQLPRIDEQLVQSQRVVDKYSALRA-----NGDVQVMDEKELDLFMTNYVLLLCSFKEQ 236
Query: 123 LQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH 182
LQQHVRVHA+EAV+ C E++ +LQ+LTGVS GEGTGATMSDD+D + D + + D
Sbjct: 237 LQQHVRVHAMEAVIACWELDQSLQSLTGVSTGEGTGATMSDDDDQVDSDINSYDGSLDGP 296
Query: 183 DLMGFGPLLPTETERSLMERVRQELKIELKQ 213
D MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 297 DTMGFGPLVPTESERSLMERVRQELKHELKQ 327
>gi|357145509|ref|XP_003573667.1| PREDICTED: homeobox protein knotted-1-like 13-like [Brachypodium
distachyon]
Length = 367
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 110/182 (60%), Positives = 134/182 (73%), Gaps = 17/182 (9%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY---GSLQQANNNN 93
KAE+ +HPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS V+ Y G L ++
Sbjct: 101 KAEVLAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSTAGGLAAGDDT- 159
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E LQ+LTGVS
Sbjct: 160 ---------RELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGVSP 210
Query: 154 GEGTGATMSDDEDD-LHMDFSLDQSASDSHDLM-GFGPLLPTETERSLMERVRQELKIEL 211
GEGTGATMSD EDD + ++ ++ D D M GFG LPTE+ERSLMERVRQELK EL
Sbjct: 211 GEGTGATMSDGEDDQADSEANMYDASLDGPDSMGGFG--LPTESERSLMERVRQELKHEL 268
Query: 212 KQ 213
KQ
Sbjct: 269 KQ 270
>gi|4098244|gb|AAD09582.1| homeobox 1 protein, partial [Solanum lycopersicum]
Length = 392
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 136/179 (75%), Gaps = 10/179 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA+I +HPLY+QLL+AHVSCLR+ATP+DQLP IDAQLAQS +V+ Y L Q
Sbjct: 126 KADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ------ 179
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
P + ++LD F+ Y+++L +FKEQLQQHVRVHA+EAVM C E+E +LQ+LTGV+ GEG
Sbjct: 180 -PPLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEG 238
Query: 157 TGATMSDDEDDLHMDFS--LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDD+DD + LD D D MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 239 TGATMSDDDDDQADSDTNFLD-GGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQ 296
>gi|365222902|gb|AEW69803.1| Hop-interacting protein THI041 [Solanum lycopersicum]
Length = 430
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 136/179 (75%), Gaps = 10/179 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA+I +HPLY+QLL+AHVSCLR+ATP+DQLP IDAQLAQS +V+ Y L Q
Sbjct: 164 KADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ------ 217
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
P + ++LD F+ Y+++L +FKEQLQQHVRVHA+EAVM C E+E +LQ+LTGV+ GEG
Sbjct: 218 -PPLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEG 276
Query: 157 TGATMSDDEDDLHMDFS--LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDD+DD + LD D D MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 277 TGATMSDDDDDQADSDTNFLD-GGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQ 334
>gi|224091647|ref|XP_002309315.1| predicted protein [Populus trichocarpa]
gi|222855291|gb|EEE92838.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/178 (62%), Positives = 132/178 (74%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI HPLYEQLLAAHV+CLR+ATP+DQL ID QLAQS V+ Y + +H
Sbjct: 26 KAEILGHPLYEQLLAAHVACLRIATPVDQLARIDTQLAQSQDVVAKYSGV-----GRSHV 80
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ + +ELD F+ Y+I+LC+FK+QLQQHVRVHA+EAVM C E+E +LQ+LTGVS GEG
Sbjct: 81 V---DEKELDQFMTHYVILLCSFKDQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEG 137
Query: 157 TGATM-SDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATM DD+D D +L D D MGFGPL+PTETERSLMERVRQELK ELKQ
Sbjct: 138 TGATMSDDDDDQADSDANLYDGNLDGLDTMGFGPLVPTETERSLMERVRQELKHELKQ 195
>gi|15236649|ref|NP_194932.1| homeobox protein knotted-1-like 5 [Arabidopsis thaliana]
gi|12644283|sp|P48002.2|KNAT5_ARATH RecName: Full=Homeobox protein knotted-1-like 5; AltName:
Full=Homeodomain-containing protein 1; AltName:
Full=Protein KNAT5
gi|17224610|gb|AAL37042.1|AF306661_1 homeodomain transcription factor KNAT5 [Arabidopsis thaliana]
gi|2506031|dbj|BAA22602.1| homeodomein containing protein 1 [Arabidopsis thaliana]
gi|3858938|emb|CAA16585.1| homeodomain containing protein 1 [Arabidopsis thaliana]
gi|7270108|emb|CAB79922.1| homeodomain containing protein 1 [Arabidopsis thaliana]
gi|109946421|gb|ABG48389.1| At4g32040 [Arabidopsis thaliana]
gi|332660597|gb|AEE85997.1| homeobox protein knotted-1-like 5 [Arabidopsis thaliana]
Length = 383
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 135/196 (68%), Gaps = 16/196 (8%)
Query: 21 GDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVL 80
G V G ++A+ KA I HP+YEQLLAAHV+CLRVATP+DQ+P IDAQL+Q H V
Sbjct: 106 GVVGGEDWRSAS---YKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVA 162
Query: 81 RSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCRE 140
Y +L +N +ELD+F++ Y+++LC+FKEQLQ HV VHA+EA+ C E
Sbjct: 163 AKYSTLGVVVDN----------KELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWE 212
Query: 141 IENTLQALTGVSLGEGTGATMSDDEDDLHMDFS---LDQSASDSHDLMGFGPLLPTETER 197
IE +LQ+LTGVS E G TMSDDEDD ++ D S S LMGFGPL+PTE ER
Sbjct: 213 IEQSLQSLTGVSPSESNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERER 272
Query: 198 SLMERVRQELKIELKQ 213
SLMERV++ELK ELKQ
Sbjct: 273 SLMERVKKELKHELKQ 288
>gi|350535567|ref|NP_001233945.1| homeobox protein knotted-1-like LET12 [Solanum lycopersicum]
gi|6016226|sp|O22300.1|LET12_SOLLC RecName: Full=Homeobox protein knotted-1-like LET12
gi|2529703|gb|AAC49918.1| class II knotted-like homeodomain protein [Solanum lycopersicum]
Length = 426
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 136/179 (75%), Gaps = 10/179 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA+I +HPLY+QLL+AHVSCLR+ATP+DQLP IDAQLAQS +V+ Y L Q
Sbjct: 164 KADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ------ 217
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
P + ++LD F+ Y+++L +FKEQLQQHVRVHA+EAVM C E+E +LQ+LTGV+ GEG
Sbjct: 218 -PPLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEG 276
Query: 157 TGATMSDDEDDLHMDFS--LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDD+DD + LD D D MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 277 TGATMSDDDDDQADSDTNFLD-GGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQ 334
>gi|297802824|ref|XP_002869296.1| hypothetical protein ARALYDRAFT_328525 [Arabidopsis lyrata subsp.
lyrata]
gi|297315132|gb|EFH45555.1| hypothetical protein ARALYDRAFT_328525 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 136/196 (69%), Gaps = 16/196 (8%)
Query: 21 GDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVL 80
G V G ++A+ KA I HP+YEQLLAAHV+CLRVATP+DQ+P IDAQL+Q H V
Sbjct: 106 GVVGGEDWRSAS---YKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVA 162
Query: 81 RSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCRE 140
Y +L +N +ELD+F++ Y+++LC+FKEQLQ HV VHA+EA+ C E
Sbjct: 163 AKYSTLGVVVDN----------KELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWE 212
Query: 141 IENTLQALTGVSLGEGTGATMSDDEDDLHMDFSL---DQSASDSHDLMGFGPLLPTETER 197
IE +LQ+LTGVS E G TMS+DEDD ++ + D S S LMGFGPL+PTE ER
Sbjct: 213 IEQSLQSLTGVSPSESNGKTMSEDEDDNQVESEVNMYDGSLDGSDCLMGFGPLVPTERER 272
Query: 198 SLMERVRQELKIELKQ 213
SLMERV++ELK ELKQ
Sbjct: 273 SLMERVKKELKHELKQ 288
>gi|302398851|gb|ADL36720.1| HD domain class transcription factor [Malus x domestica]
Length = 371
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 134/178 (75%), Gaps = 5/178 (2%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
KA+I HPLYEQL++AHVS LR+ TP+DQLP ID +L QS V+ +Y +L+ N
Sbjct: 98 FKADIVGHPLYEQLVSAHVSSLRIPTPVDQLPRIDEKLLQSQRVVDNYSALRA-----NG 152
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
+ + +ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E++ +LQ+LTGVS GE
Sbjct: 153 DVGVMDEKELDLFMTNYVLLLCSFKEQLQQHVRVHAMEAVMACWELDQSLQSLTGVSTGE 212
Query: 156 GTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
GTGATMSDD+D L D + + D D MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 213 GTGATMSDDDDQLDSDINSYDGSLDGPDTMGFGPLVPTESERSLMERVRQELKHELKQ 270
>gi|302771459|ref|XP_002969148.1| hypothetical protein SELMODRAFT_451277 [Selaginella moellendorffii]
gi|300163653|gb|EFJ30264.1| hypothetical protein SELMODRAFT_451277 [Selaginella moellendorffii]
Length = 293
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 129/186 (69%), Gaps = 13/186 (6%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA++ +HPLYEQLL+AH+SCLR ATP+DQLP IDAQLA S V Y L N
Sbjct: 23 LKADLVTHPLYEQLLSAHISCLRTATPVDQLPKIDAQLAHSSQVAAKYSILA----TNEQ 78
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGV---- 151
LS ++ E++ F+A Y+ +L +FK+QLQQHVRVHA+EAV+ C E+E +L LTG
Sbjct: 79 GLSK-DKDEVNEFMAHYVTLLRSFKDQLQQHVRVHAMEAVVACWELEQSLFTLTGKHNFT 137
Query: 152 --SLGEGTGATMSDDEDDLHMDFS--LDQSASDSHDLMGFGPLLPTETERSLMERVRQEL 207
S EGTGATMS+DEDD D + D HD GFGPL+PTETER+LMERVR EL
Sbjct: 138 SRSKREGTGATMSEDEDDQQADSDSGYYDAGMDGHDFTGFGPLIPTETERTLMERVRHEL 197
Query: 208 KIELKQ 213
KIELKQ
Sbjct: 198 KIELKQ 203
>gi|312281601|dbj|BAJ33666.1| unnamed protein product [Thellungiella halophila]
Length = 385
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 127/180 (70%), Gaps = 13/180 (7%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA I HP+YEQLLAAHV+CLRVATP+DQ+P IDAQL+Q H V Y +L +N
Sbjct: 122 KAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTLGVVEDN---- 177
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD+F++ Y+++LC+FKEQLQ HV VHA+EA+ C EIE +LQ++TGVS E
Sbjct: 178 ------KELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSITGVSPSEN 231
Query: 157 TGATMSDDEDDLHMDFS---LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
G TMSDDED ++ D S S LMGFGPL+PTE ERSLMERV++ELK ELKQ
Sbjct: 232 NGKTMSDDEDGNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQ 291
>gi|302784284|ref|XP_002973914.1| hypothetical protein SELMODRAFT_173857 [Selaginella moellendorffii]
gi|300158246|gb|EFJ24869.1| hypothetical protein SELMODRAFT_173857 [Selaginella moellendorffii]
Length = 363
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 129/186 (69%), Gaps = 13/186 (6%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA++ +HPLYEQLL+AH+SCLR ATP+DQLP IDAQLA S V Y L N
Sbjct: 93 LKADLVTHPLYEQLLSAHISCLRTATPVDQLPKIDAQLAHSSQVAAKYSILAA----NEQ 148
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGV---- 151
LS ++ E++ F+A Y+ +L +FK+QLQQHVRVHA+EAV+ C E+E +L LTG
Sbjct: 149 GLS-KDKDEVNEFMAHYVTLLRSFKDQLQQHVRVHAMEAVVACWELEQSLFTLTGKHNFT 207
Query: 152 --SLGEGTGATMSDDEDDLHMDFS--LDQSASDSHDLMGFGPLLPTETERSLMERVRQEL 207
S EGTGATMS+DEDD D + D HD GFGPL+PTETER+LMERVR EL
Sbjct: 208 SRSKREGTGATMSEDEDDQQADSDSGYYDAGMDGHDFTGFGPLIPTETERTLMERVRHEL 267
Query: 208 KIELKQ 213
KIELKQ
Sbjct: 268 KIELKQ 273
>gi|163838594|dbj|BAF95776.1| class 2 knotted1-like protein [Nicotiana tabacum]
Length = 391
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 134/178 (75%), Gaps = 8/178 (4%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA+I +HPLY+QLL+AHVSCLR+ATP+DQLP IDAQLAQS +V+ Y L Q
Sbjct: 131 KADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ------ 184
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ ++LD F+ Y+++L +FKEQLQQHVRVHA+EAVM C E+E +LQ+LTGV+ GEG
Sbjct: 185 -PLLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEG 243
Query: 157 TGATMSDDEDDLHMDFS-LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDD+DD + + D D MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 244 TGATMSDDDDDQADSDTNFLEGGFDGSDSMGFGPLVPTESERSLMERVRQELKHELKQ 301
>gi|255565117|ref|XP_002523551.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223537258|gb|EEF38890.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 374
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 131/178 (73%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI HPLYEQLLAAHV+CLR+ATP+DQL ID QLAQS V+ Y L N
Sbjct: 78 KAEILGHPLYEQLLAAHVACLRIATPVDQLARIDTQLAQSQEVVAKYSVL-----GNGQV 132
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ + +ELD F+ Y+++LC+FK+QLQQHVRVHA+EAVM C E+E +LQ+LTG SLGEG
Sbjct: 133 I---DEKELDQFMTHYVLLLCSFKDQLQQHVRVHAMEAVMACWELEQSLQSLTGASLGEG 189
Query: 157 TGATM-SDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATM DD+D D +L + + D MGFGPL+PTETERSLME VR+ELK ELKQ
Sbjct: 190 TGATMSDDDDDQADSDANLYDGSLEGLDCMGFGPLVPTETERSLMEHVRKELKHELKQ 247
>gi|58011289|gb|AAW62519.1| KNOTTED1-like protein [Selaginella kraussiana]
Length = 363
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 136/199 (68%), Gaps = 11/199 (5%)
Query: 15 GGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLA 74
G G G GD+ + + +L KA+I +HPLYEQLL AHVSCLR+ATP+DQL ID Q+A
Sbjct: 82 GLGVGSGDMVEECARMQSAKL-KADIVTHPLYEQLLEAHVSCLRIATPVDQLGKIDGQIA 140
Query: 75 QSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEA 134
Q H ++ Y L N+ L + + ELD F+A Y+++L +FK+QLQ HVRVHA EA
Sbjct: 141 QCHQLIAKYYIL-----ANHQLLCGNSKDELDQFMAHYVMLLRSFKDQLQHHVRVHAKEA 195
Query: 135 VMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD-SHDLMGFGPLLPT 193
VM C E+E +L LTGVS GEG+GATMSDDE Q SD D +GFGPL+PT
Sbjct: 196 VMACWELEQSLLGLTGVSPGEGSGATMSDDE----TTEQEQQCESDLWQDNLGFGPLIPT 251
Query: 194 ETERSLMERVRQELKIELK 212
ETER+LMERVRQELK ELK
Sbjct: 252 ETERTLMERVRQELKHELK 270
>gi|242060764|ref|XP_002451671.1| hypothetical protein SORBIDRAFT_04g005620 [Sorghum bicolor]
gi|241931502|gb|EES04647.1| hypothetical protein SORBIDRAFT_04g005620 [Sorghum bicolor]
Length = 444
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 129/178 (72%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA IA+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + A +
Sbjct: 48 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGGPSGG- 106
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEG
Sbjct: 107 ------EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 160
Query: 157 TGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDED+ +D + +D D MGFGPL+ TE ERSL+ERVRQELK ELKQ
Sbjct: 161 TGATMSDDEDN-QVDSEANMFDGNDGSDGMGFGPLILTEGERSLVERVRQELKNELKQ 217
>gi|293334789|ref|NP_001169973.1| putative knotted-like transcription factor family protein [Zea
mays]
gi|224032663|gb|ACN35407.1| unknown [Zea mays]
gi|413935912|gb|AFW70463.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 300
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 129/178 (72%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA IA+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + A +
Sbjct: 42 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGGPSGG- 100
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEG
Sbjct: 101 ------EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 154
Query: 157 TGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDED+ +D + +D D MGFGPL+ TE ERSL+ERVRQELK ELKQ
Sbjct: 155 TGATMSDDEDN-QVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKNELKQ 211
>gi|413935911|gb|AFW70462.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 310
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 129/178 (72%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA IA+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + A +
Sbjct: 42 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGGPSGG- 100
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEG
Sbjct: 101 ------EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 154
Query: 157 TGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDED+ +D + +D D MGFGPL+ TE ERSL+ERVRQELK ELKQ
Sbjct: 155 TGATMSDDEDN-QVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKNELKQ 211
>gi|413954622|gb|AFW87271.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 316
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 128/177 (72%), Gaps = 6/177 (3%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA IA+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A + + + A ++
Sbjct: 44 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPMEAAAAAAAAGGAHSGG 103
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E TLQ+LTG S GEG
Sbjct: 104 ------EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEG 157
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDED+ S ++ D MGFGPL+ TE ERSL+ERVRQELK ELKQ
Sbjct: 158 TGATMSDDEDNQVDSESNMFDGNEGSDGMGFGPLMLTEGERSLVERVRQELKHELKQ 214
>gi|413926367|gb|AFW66299.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 363
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 128/178 (71%), Gaps = 4/178 (2%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA IA+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + A
Sbjct: 100 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGAAAAGG 159
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
S E ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEG
Sbjct: 160 PSGGE--ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 217
Query: 157 TGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TG TMSDDED+ +D + +D D MGFGPL+ TE ERSL+ERVR+ELK ELKQ
Sbjct: 218 TGGTMSDDEDN-QVDSEANMFDGNDGSDGMGFGPLILTEGERSLVERVRKELKNELKQ 274
>gi|357138416|ref|XP_003570788.1| PREDICTED: homeobox protein knotted-1-like 2-like [Brachypodium
distachyon]
Length = 304
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 127/178 (71%), Gaps = 11/178 (6%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA IA+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + +
Sbjct: 47 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLVAAAGSAGGPSGG--- 103
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEG
Sbjct: 104 ------EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 157
Query: 157 TGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDED+ +D + +D D MGFGPL+ TE ERSL+ERVR ELK ELKQ
Sbjct: 158 TGATMSDDEDN-QVDSETNLFDGNDGSDGMGFGPLILTEGERSLIERVRHELKSELKQ 214
>gi|162458143|ref|NP_001105852.1| KNOX family class 2 homeodomain protein [Zea mays]
gi|126153888|emb|CAJ58046.2| KNOX family class 2 homeodomain protein [Zea mays]
Length = 304
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 128/178 (71%), Gaps = 4/178 (2%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA IA+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + A
Sbjct: 41 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGAAAAGG 100
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
S E ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEG
Sbjct: 101 PSGGE--ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 158
Query: 157 TGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TG TMSDDED+ +D + +D D MGFGPL+ TE ERSL+ERVR+ELK ELKQ
Sbjct: 159 TGGTMSDDEDN-QVDSEANMFDGNDGSDGMGFGPLILTEGERSLVERVRKELKNELKQ 215
>gi|221272028|sp|Q0E3C3.2|KNOS2_ORYSJ RecName: Full=Homeobox protein knotted-1-like 2; AltName:
Full=Homeobox protein HOS58
gi|215769326|dbj|BAH01555.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 313
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 129/178 (72%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA +A+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + + A +
Sbjct: 43 KAAVAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSGG- 101
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEG
Sbjct: 102 ------EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 155
Query: 157 TGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDED+ +D + +D D MGFGPL+ TE ERSL+ERVR ELK ELKQ
Sbjct: 156 TGATMSDDEDN-QVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVRHELKNELKQ 212
>gi|218198650|gb|EEC81077.1| hypothetical protein OsI_23897 [Oryza sativa Indica Group]
Length = 323
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 126/177 (71%), Gaps = 3/177 (1%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA IA+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + + A
Sbjct: 48 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGGAP 107
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E TLQ+LTG S GEG
Sbjct: 108 SG---GEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEG 164
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
+GATMSDDED+ S +D D MGFGPL+ TE ERSL+ERVRQELK ELKQ
Sbjct: 165 SGATMSDDEDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQ 221
>gi|357123228|ref|XP_003563314.1| PREDICTED: homeobox protein knotted-1-like 2-like [Brachypodium
distachyon]
Length = 317
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 102/177 (57%), Positives = 123/177 (69%), Gaps = 11/177 (6%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA + +HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A + +
Sbjct: 50 KAAVEAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPAPVPPAAAHSGG----- 104
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E TLQ+LTG S GEG
Sbjct: 105 ------EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEG 158
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDED+ S +D D MGFGPL+ TE ERSL+ERVRQELK ELKQ
Sbjct: 159 TGATMSDDEDNPIDTESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQ 215
>gi|195619568|gb|ACG31614.1| homeobox protein knotted-1-like 3 [Zea mays]
Length = 298
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 128/178 (71%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA IA+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + A +
Sbjct: 40 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGGPSGG- 98
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEG
Sbjct: 99 ------EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 152
Query: 157 TGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TG TMSDDED+ +D + +D D MGFGPL+ TE ERSL+ERVR+ELK ELKQ
Sbjct: 153 TGGTMSDDEDN-QVDSEANMFDGNDGSDGMGFGPLILTEGERSLVERVRKELKNELKQ 209
>gi|413926368|gb|AFW66300.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 328
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 128/178 (71%), Gaps = 4/178 (2%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA IA+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + A
Sbjct: 40 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGAAAAGG 99
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
S E ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEG
Sbjct: 100 PSGGE--ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 157
Query: 157 TGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TG TMSDDED+ +D + +D D MGFGPL+ TE ERSL+ERVR+ELK ELKQ
Sbjct: 158 TGGTMSDDEDN-QVDSEANMFDGNDGSDGMGFGPLILTEGERSLVERVRKELKNELKQ 214
>gi|14348597|gb|AAK61309.1|AF285148_1 class 2 KNOTTED1-like protein MKN1-3 [Physcomitrella patens]
Length = 533
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 120/174 (68%), Gaps = 4/174 (2%)
Query: 40 IASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSP 99
I +HPLY LL AH SCLRV TP+DQLP I+AQL Q+ HV Y L ++ ++
Sbjct: 273 IVAHPLYPDLLNAHASCLRVGTPVDQLPHIEAQLTQARHVTSKYSVLHP----DHLEITE 328
Query: 100 HERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGA 159
E+ ELD F+AQY+++LC+FK+ LQQHV EA+M C E+E L LTGVS GE TGA
Sbjct: 329 DEKTELDQFMAQYIMLLCSFKDHLQQHVYYDVTEAMMSCWELEQALHNLTGVSAGESTGA 388
Query: 160 TMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TMS++++D D+ + D D GFGPL+PTE+ER+LMERVRQELK ELKQ
Sbjct: 389 TMSEEDEDYDSDYGAYDAHMDPQDSGGFGPLVPTESERTLMERVRQELKYELKQ 442
>gi|168040482|ref|XP_001772723.1| KNOX class 2 protein MKN1-3 [Physcomitrella patens subsp. patens]
gi|162675948|gb|EDQ62437.1| KNOX class 2 protein MKN1-3 [Physcomitrella patens subsp. patens]
Length = 533
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 120/174 (68%), Gaps = 4/174 (2%)
Query: 40 IASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSP 99
I +HPLY LL AH SCLRV TP+DQLP I+AQL Q+ HV Y L ++ ++
Sbjct: 273 IVAHPLYPDLLNAHASCLRVGTPVDQLPHIEAQLTQARHVTSKYSVLHP----DHLEITE 328
Query: 100 HERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGA 159
E+ ELD F+AQY+++LC+FK+ LQQHV EA+M C E+E L LTGVS GE TGA
Sbjct: 329 DEKTELDQFMAQYIMLLCSFKDHLQQHVYYDVTEAMMSCWELEQALHNLTGVSAGESTGA 388
Query: 160 TMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TMS++++D D+ + D D GFGPL+PTE+ER+LMERVRQELK ELKQ
Sbjct: 389 TMSEEDEDYDSDYGAYDAHMDPQDSGGFGPLVPTESERTLMERVRQELKYELKQ 442
>gi|294461542|gb|ADE76332.1| unknown [Picea sitchensis]
Length = 354
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 133/180 (73%), Gaps = 8/180 (4%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IKA+I SHPLY+QLL+AH+ CLR+ATP DQ IDAQLAQS HV+ Y L N+N
Sbjct: 91 IKADIVSHPLYDQLLSAHLECLRIATPKDQHSRIDAQLAQSQHVVTKYSVL----GNDNI 146
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
+S +++ELD F+ QY+++LC+FKEQLQ HV VH +EAV C +++++L LTGVS GE
Sbjct: 147 LVS--DKKELDQFMTQYVLLLCSFKEQLQYHVHVHVMEAVRACIDLQHSLLTLTGVSPGE 204
Query: 156 GTGATMSDDEDDLHMDFS--LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
GTGATMSDDEDD + D D++G GPL+PTE+ERSLMERVRQELK++LKQ
Sbjct: 205 GTGATMSDDEDDNADSDTDLYDGGLDGGQDMVGLGPLIPTESERSLMERVRQELKVDLKQ 264
>gi|221272019|sp|Q94LW4.2|KNOSB_ORYSJ RecName: Full=Homeobox protein knotted-1-like 11; AltName:
Full=Homeobox protein HOS59
gi|215768803|dbj|BAH01032.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 323
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 125/177 (70%), Gaps = 3/177 (1%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA IA+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + + A
Sbjct: 48 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGGAP 107
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E TLQ+LTG S EG
Sbjct: 108 SG---GEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREG 164
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
+GATMSDDED+ S +D D MGFGPL+ TE ERSL+ERVRQELK ELKQ
Sbjct: 165 SGATMSDDEDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQ 221
>gi|115469202|ref|NP_001058200.1| Os06g0646600 [Oryza sativa Japonica Group]
gi|14149139|dbj|BAB55659.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
Group]
gi|51535417|dbj|BAD37316.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
Group]
gi|51535639|dbj|BAD37613.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
Group]
gi|113596240|dbj|BAF20114.1| Os06g0646600 [Oryza sativa Japonica Group]
Length = 317
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 125/177 (70%), Gaps = 3/177 (1%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA IA+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + + A
Sbjct: 48 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGGAP 107
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E TLQ+LTG S EG
Sbjct: 108 SG---GEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREG 164
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
+GATMSDDED+ S +D D MGFGPL+ TE ERSL+ERVRQELK ELKQ
Sbjct: 165 SGATMSDDEDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQ 221
>gi|302822121|ref|XP_002992720.1| hypothetical protein SELMODRAFT_450988 [Selaginella moellendorffii]
gi|302823880|ref|XP_002993588.1| hypothetical protein SELMODRAFT_451281 [Selaginella moellendorffii]
gi|300138600|gb|EFJ05363.1| hypothetical protein SELMODRAFT_451281 [Selaginella moellendorffii]
gi|300139461|gb|EFJ06201.1| hypothetical protein SELMODRAFT_450988 [Selaginella moellendorffii]
Length = 275
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 130/184 (70%), Gaps = 11/184 (5%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HPLYEQLL AHV+CLR+ATP+DQL ID Q++Q HH + Y L N+
Sbjct: 5 LKADIVTHPLYEQLLEAHVACLRIATPVDQLSRIDGQISQCHHAIAKYSILA-----NHQ 59
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT-GVSLG 154
L ++ELD+F+A Y+++L +FK+QLQ HVRVHA EAVM C E+E +L +LT G + G
Sbjct: 60 LLCGSSKEELDHFMAHYVMLLKSFKDQLQHHVRVHAKEAVMACWELEQSLISLTAGAAPG 119
Query: 155 EGTGATMSDDEDDLHMDFSLDQSASDS-----HDLMGFGPLLPTETERSLMERVRQELKI 209
EGTGATMSDDED+ Q S D +GFGPL+PTETER+LMERVRQELK
Sbjct: 120 EGTGATMSDDEDEQQQPQQEQQQQQQSDSDYWQDNLGFGPLIPTETERTLMERVRQELKH 179
Query: 210 ELKQ 213
ELKQ
Sbjct: 180 ELKQ 183
>gi|302822119|ref|XP_002992719.1| KNOX transcription factor [Selaginella moellendorffii]
gi|302823878|ref|XP_002993587.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300138599|gb|EFJ05362.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300139460|gb|EFJ06200.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 304
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/184 (55%), Positives = 130/184 (70%), Gaps = 11/184 (5%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HPLYEQLL AHV+CLR+ATP+DQL ID Q++Q HH + Y L N+
Sbjct: 34 LKADIVTHPLYEQLLEAHVACLRIATPVDQLSRIDGQISQCHHAIAKYSILA-----NHQ 88
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT-GVSLG 154
L ++ELD+F+A Y+++L +FK+QLQ HVRVHA EAVM C E+E +L +LT G + G
Sbjct: 89 LLCGSSKEELDHFMAHYVMLLKSFKDQLQHHVRVHAKEAVMACWELEQSLISLTAGAAPG 148
Query: 155 EGTGATMSDDEDDLHMDFSLDQSASDS-----HDLMGFGPLLPTETERSLMERVRQELKI 209
EGTGATMSDDED+ Q S D +GFGPL+PTETER+LMERVRQELK
Sbjct: 149 EGTGATMSDDEDEQQQPQQEQQQQQQSDSDYWQDNLGFGPLIPTETERTLMERVRQELKH 208
Query: 210 ELKQ 213
ELKQ
Sbjct: 209 ELKQ 212
>gi|33333542|gb|AAQ11887.1| knotted 7 [Hordeum vulgare]
Length = 340
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 122/177 (68%), Gaps = 14/177 (7%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA + +HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A +
Sbjct: 46 KAAVEAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAAR----------APPPMPPASA 95
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
LS E ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E TLQ+LTG S GEG
Sbjct: 96 LSGGE--ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEG 153
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDED+ S +D D MGFG L TE ERSL+ERVRQELK ELKQ
Sbjct: 154 TGATMSDDEDNPVDSESNMFDGNDVSDGMGFGML--TEGERSLVERVRQELKHELKQ 208
>gi|326534150|dbj|BAJ89425.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 122/177 (68%), Gaps = 14/177 (7%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA + +HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A +
Sbjct: 45 KAAVEAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAAR----------APPPMPPASA 94
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
LS E ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E TLQ+LTG S GEG
Sbjct: 95 LSGGE--ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEG 152
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDED+ S +D D MGFG L TE ERSL+ERVRQELK ELKQ
Sbjct: 153 TGATMSDDEDNPVDSESNMFDGNDVSDGMGFGML--TEGERSLVERVRQELKHELKQ 207
>gi|218190193|gb|EEC72620.1| hypothetical protein OsI_06117 [Oryza sativa Indica Group]
Length = 250
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 125/189 (66%), Gaps = 5/189 (2%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA +A+HPL +LLAA V+CLRVATP+ QLP +D + S + AN
Sbjct: 43 KAAVAAHPLSARLLAAPVACLRVATPVAQLPRLDEADSASARLPSQPPPTTDANGG---P 99
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
L + L + Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEG
Sbjct: 100 LRWRGARPLHVVVTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 159
Query: 157 TGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVM 215
TGATMSDDED+ +D + +D D MGFGPL+ TE ERSL+ERVR ELK ELKQV
Sbjct: 160 TGATMSDDEDN-QVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVRHELKNELKQVA 218
Query: 216 TTYIYIYIY 224
+ +I+
Sbjct: 219 FCPLKCFIH 227
>gi|326493406|dbj|BAJ85164.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 114/167 (68%), Gaps = 14/167 (8%)
Query: 47 EQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELD 106
E+LL AHV+CLRVATP+DQLP IDAQ+A +LS E ELD
Sbjct: 1 ERLLEAHVACLRVATPVDQLPRIDAQIAAR----------APPPMPPASALSGGE--ELD 48
Query: 107 NFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDED 166
F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E TLQ+LTG S GEGTGATMSDDED
Sbjct: 49 LFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEGTGATMSDDED 108
Query: 167 DLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
+ S +D D MGFG L TE ERSL+ERVRQELK ELKQ
Sbjct: 109 NPVDSESNMFDGNDVSDGMGFGML--TEGERSLVERVRQELKHELKQ 153
>gi|168026109|ref|XP_001765575.1| KNOX class 2 protein MKN6 [Physcomitrella patens subsp. patens]
gi|162683213|gb|EDQ69625.1| KNOX class 2 protein MKN6 [Physcomitrella patens subsp. patens]
Length = 518
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 138/222 (62%), Gaps = 15/222 (6%)
Query: 4 PSLGVMGSSSSGGGGGGGDVSGHHDQTATVQLI-KAEIASHPLYEQLLAAHVSCLRVATP 62
PSLG + G G D G + ++ +A I +HPLY ++L H +CLRV TP
Sbjct: 220 PSLG---GARYAGDYGRTDWDGARHKAEWEEIRNRALIVNHPLYPEMLMNHAACLRVGTP 276
Query: 63 IDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQ 122
+DQLP I+AQLAQ+ +++ Y +L ++ ++ E+ ELD F+ +Y +L FK+
Sbjct: 277 VDQLPSIEAQLAQAPNIIEKYRAL-----HDQVDITEDEKVELDRFMTEYTALLGDFKDV 331
Query: 123 LQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDF-----SLDQS 177
LQ HV EA++GC E+E L ALTGVS GEG+GATMSD +DD D + DQS
Sbjct: 332 LQHHVYTDVAEAMIGCWELEQALHALTGVSPGEGSGATMSDVDDDQDYDSDYAGTAYDQS 391
Query: 178 ASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTYI 219
D HD G+GPL+PTETERSLMERVRQELK ELKQ + I
Sbjct: 392 M-DYHDSGGYGPLVPTETERSLMERVRQELKHELKQGYRSKI 432
>gi|371767694|gb|AEX56203.1| class II KNOX protein [Linaria vulgaris]
Length = 171
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/115 (69%), Positives = 98/115 (85%), Gaps = 6/115 (5%)
Query: 111 QYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDL-- 168
+Y++VLC+F+EQLQQHVRVHAVEAV+ CREIE+ LQ+LTGV+LGEG+GATMSDDED++
Sbjct: 1 RYMLVLCSFREQLQQHVRVHAVEAVVACREIEHNLQSLTGVALGEGSGATMSDDEDEMMM 60
Query: 169 -HMDFS-LDQSAS--DSHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTYI 219
M+ S LD + D+HDLMGFGPLLPTE+ERSLM+RVRQELKIELKQ + I
Sbjct: 61 HQMELSHLDHQSGPHDAHDLMGFGPLLPTESERSLMDRVRQELKIELKQGFKSRI 115
>gi|25446693|gb|AAN74840.1| Putative KNOX family class 2 homeodomain protein [Oryza sativa
Japonica Group]
Length = 171
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/116 (68%), Positives = 95/116 (81%), Gaps = 6/116 (5%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
QL+K EIA HPL EQL+AAHV CLRVATPID LPLIDAQLAQS +L SY + ++
Sbjct: 43 QLLKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAA------HH 96
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
LSPH++QELD+FLAQY+++LC+F+EQLQQHVRVHAVEAVM CREIE +LQ LT
Sbjct: 97 RPFLSPHDKQELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLT 152
>gi|414864471|tpg|DAA43028.1| TPA: putative knotted-like transcription factor family protein [Zea
mays]
Length = 198
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/111 (70%), Positives = 93/111 (83%), Gaps = 2/111 (1%)
Query: 110 AQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLH 169
AQYL++LC+F+EQLQQHVRVHAVEAVM CREIE +LQ LTG +L EGTGATMS+DED+
Sbjct: 6 AQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDEAP 65
Query: 170 M-DFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTYI 219
M + LD SD HD+MGFGPL+PT++ERSLMERVRQELK+ELKQ + I
Sbjct: 66 MLEVGLDM-GSDGHDMMGFGPLMPTDSERSLMERVRQELKMELKQGFKSRI 115
>gi|125581054|gb|EAZ21985.1| hypothetical protein OsJ_05640 [Oryza sativa Japonica Group]
Length = 281
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 107/178 (60%), Gaps = 49/178 (27%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA +A+HPLYE+LL AHV+CLRVATP
Sbjct: 43 KAAVAAHPLYERLLEAHVACLRVATPT--------------------------------- 69
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEG
Sbjct: 70 --------------HYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 115
Query: 157 TGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDED+ +D + +D D MGFGPL+ TE ERSL+ERVR ELK ELKQ
Sbjct: 116 TGATMSDDEDN-QVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVRHELKNELKQ 172
>gi|296082096|emb|CBI21101.3| unnamed protein product [Vitis vinifera]
Length = 219
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/114 (67%), Positives = 94/114 (82%), Gaps = 1/114 (0%)
Query: 101 ERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGAT 160
+ +ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS GEGTGAT
Sbjct: 4 DEKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 63
Query: 161 MSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
MSDDE+D + D +L + + D MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 64 MSDDEEDQIDSDANLFDGSLEGADSMGFGPLVPTESERSLMERVRQELKHELKQ 117
>gi|4887620|dbj|BAA77823.1| HOS66 [Oryza sativa Japonica Group]
gi|108705928|gb|ABF93723.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
Group]
Length = 196
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/112 (68%), Positives = 93/112 (83%), Gaps = 3/112 (2%)
Query: 110 AQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLH 169
AQY+++LC+F+EQLQQHVRVHAVEAVM CREIE +LQ LTG +L EGTGATMS+DED+
Sbjct: 3 AQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDETA 62
Query: 170 --MDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTYI 219
++ +D SD HDLMGFGPL+PT++ERSLMERVRQELKIELKQ + I
Sbjct: 63 PMLEGPMDM-GSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRI 113
>gi|108705926|gb|ABF93721.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
Group]
gi|215765705|dbj|BAG87402.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 191
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/109 (67%), Positives = 90/109 (82%), Gaps = 3/109 (2%)
Query: 113 LIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLH--M 170
+++LC+F+EQLQQHVRVHAVEAVM CREIE +LQ LTG +L EGTGATMS+DED+ +
Sbjct: 1 MMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDETAPML 60
Query: 171 DFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTYI 219
+ +D SD HDLMGFGPL+PT++ERSLMERVRQELKIELKQ + I
Sbjct: 61 EGPMDM-GSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRI 108
>gi|413957111|gb|AFW89760.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 191
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/108 (70%), Positives = 89/108 (82%), Gaps = 2/108 (1%)
Query: 114 IVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMS-DDEDDLHM-D 171
++LC+F+EQLQQHVRVHAVEAVM CREIE +LQ LTGV+L EGTGATMS +DED+ M +
Sbjct: 1 MLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGVTLEEGTGATMSEEDEDEAPMLE 60
Query: 172 FSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTYI 219
L SD HD+MGFGPLLPT++ERSLMERVRQELKIELKQ + I
Sbjct: 61 VGLVDMGSDGHDMMGFGPLLPTDSERSLMERVRQELKIELKQGFKSRI 108
>gi|115444643|ref|NP_001046101.1| Os02g0182800 [Oryza sativa Japonica Group]
gi|14149137|dbj|BAB55658.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
Group]
gi|113535632|dbj|BAF08015.1| Os02g0182800, partial [Oryza sativa Japonica Group]
Length = 212
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 89/112 (79%), Gaps = 2/112 (1%)
Query: 103 QELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMS 162
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEGTGATMS
Sbjct: 1 EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMS 60
Query: 163 DDEDDLHMDFSLDQ-SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
DDED+ +D + +D D MGFGPL+ TE ERSL+ERVR ELK ELKQ
Sbjct: 61 DDEDN-QVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVRHELKNELKQ 111
>gi|238005954|gb|ACR34012.1| unknown [Zea mays]
Length = 194
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/106 (66%), Positives = 85/106 (80%), Gaps = 2/106 (1%)
Query: 109 LAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDL 168
+ Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEGTGATMSDDED+
Sbjct: 1 MTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSDDEDN- 59
Query: 169 HMDFSLDQ-SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
+D + +D D MGFGPL+ TE ERSL+ERVRQELK ELKQ
Sbjct: 60 QVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKNELKQ 105
>gi|371767700|gb|AEX56205.1| class II KNOX protein [Gymnadenia odoratissima]
Length = 168
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/111 (63%), Positives = 85/111 (76%), Gaps = 13/111 (11%)
Query: 109 LAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMS------ 162
+A Y+++LC+FKEQLQQHVRVHA+EAVM C E+E +LQ+LTG+S GEGTGATMS
Sbjct: 1 MAHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGISPGEGTGATMSDDDDDQ 60
Query: 163 -DDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELK 212
D E + + D S D S D MGFGPL+PTE+ERSLMERVRQELK ELK
Sbjct: 61 ADGETNFY-DGSFDGS-----DSMGFGPLIPTESERSLMERVRQELKHELK 105
>gi|297608351|ref|NP_001061467.2| Os08g0292900 [Oryza sativa Japonica Group]
gi|255678331|dbj|BAF23381.2| Os08g0292900 [Oryza sativa Japonica Group]
Length = 194
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 3/106 (2%)
Query: 109 LAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD- 167
+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E LQ+LTG S GEGTGATMSD EDD
Sbjct: 1 MTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATMSDGEDDQ 60
Query: 168 LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
+ ++ + D D MGFG LPTE+ERSLMERVRQELK ELKQ
Sbjct: 61 ADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQ 104
>gi|222635984|gb|EEE66116.1| hypothetical protein OsJ_22154 [Oryza sativa Japonica Group]
Length = 256
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 81/106 (76%)
Query: 108 FLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD 167
+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E TLQ+LTG S EG+GATMSDDED+
Sbjct: 47 YQTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREGSGATMSDDEDN 106
Query: 168 LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
S +D D MGFGPL+ TE ERSL+ERVRQELK ELKQ
Sbjct: 107 QVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQ 152
>gi|218200874|gb|EEC83301.1| hypothetical protein OsI_28664 [Oryza sativa Indica Group]
gi|222640286|gb|EEE68418.1| hypothetical protein OsJ_26781 [Oryza sativa Japonica Group]
Length = 212
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 81/103 (78%), Gaps = 3/103 (2%)
Query: 112 YLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHM 170
Y+++LC+FKEQLQQHVRVHA+EAVM C E+E LQ+LTG S GEGTGATMSD EDD
Sbjct: 12 YVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATMSDGEDDQADS 71
Query: 171 DFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
+ ++ + D D MGFG LPTE+ERSLMERVRQELK ELKQ
Sbjct: 72 EANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQ 112
>gi|371767702|gb|AEX56206.1| class II KNOX protein [Gymnadenia rhellicani]
Length = 166
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 83/108 (76%), Gaps = 13/108 (12%)
Query: 112 YLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMS-------DD 164
Y+++LC+FKEQLQQHVRVHA+EAVM C E+E +LQ+LTG+S GEGTGATMS D
Sbjct: 2 YVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGISPGEGTGATMSDDDDDQADG 61
Query: 165 EDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELK 212
E + + D S D S D MGFGPL+PTE+ERSLMERVRQELK ELK
Sbjct: 62 ETNFY-DGSFDGS-----DSMGFGPLIPTESERSLMERVRQELKHELK 103
>gi|371767704|gb|AEX56207.1| class II KNOX protein [Orchis anthropophora]
gi|371767706|gb|AEX56208.1| class II KNOX protein [Orchis italica]
Length = 166
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 85/103 (82%), Gaps = 1/103 (0%)
Query: 112 YLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMD 171
Y+++LC+FKEQLQQHVRVHA+EAVM C E+E +LQ+LTGVS GEGTGATMSDD+DD
Sbjct: 2 YVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDDDDQEDS 61
Query: 172 FS-LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
+ + + D HD MGFGPL+PTE+ERSLMERVR ELK ELKQ
Sbjct: 62 ETNIYDGSLDVHDTMGFGPLVPTESERSLMERVRHELKHELKQ 104
>gi|371767697|gb|AEX56204.1| class II KNOX protein, partial [Dactylorhiza viridis]
Length = 166
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/103 (67%), Positives = 85/103 (82%), Gaps = 1/103 (0%)
Query: 112 YLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMD 171
Y+++LC+FKEQLQQHVRVHA+EAVM C E+E +LQ+LTGVS GEGTGATMSDD+DD
Sbjct: 2 YVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDDDDQEDS 61
Query: 172 FS-LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
+ + + D HD MG+GPL+PTE+ERSLMERVR ELK ELKQ
Sbjct: 62 ETNIYDGSLDVHDTMGYGPLVPTESERSLMERVRHELKHELKQ 104
>gi|224092536|ref|XP_002309651.1| predicted protein [Populus trichocarpa]
gi|222855627|gb|EEE93174.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Query: 132 VEAVMGCREIENTLQALTGVSLGEGTGATMSDD-EDDLHMDFSLDQSASDSHDLMGFGPL 190
+EAVM C EIE +LQ+LTGVS GEGTGATMSDD ED + + ++ + + D MGFGPL
Sbjct: 1 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSEANMFDGSLEGVDTMGFGPL 60
Query: 191 LPTETERSLMERVRQELKIELKQ 213
+PTE+ERSLMERVRQELK ELKQ
Sbjct: 61 VPTESERSLMERVRQELKHELKQ 83
>gi|323388713|gb|ADX60161.1| ORPHAN transcription factor [Zea mays]
Length = 171
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Query: 132 VEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPL 190
+EAVMGC E+E +LQ+LTG S GEGTGATMSDDED+ +D + +D D MGFGPL
Sbjct: 1 MEAVMGCWELEQSLQSLTGASPGEGTGATMSDDEDN-QVDSEANMFDGNDGSDGMGFGPL 59
Query: 191 LPTETERSLMERVRQELKIELKQ 213
+ TE ERSL+ERVRQELK ELKQ
Sbjct: 60 MLTEGERSLVERVRQELKNELKQ 82
>gi|14090233|dbj|BAA77821.2| HOS58 [Oryza sativa Japonica Group]
Length = 183
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
Query: 132 VEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPL 190
+EAVMGC E+E +LQ+LTG S GEGTGATMSDDED+ +D + +D D MGFGPL
Sbjct: 1 MEAVMGCWELEQSLQSLTGASPGEGTGATMSDDEDN-QVDSEANMFDGNDGSDGMGFGPL 59
Query: 191 LPTETERSLMERVRQELKIELKQ 213
+ TE ERSL+ERVR ELK ELKQ
Sbjct: 60 MLTEGERSLVERVRHELKNELKQ 82
>gi|85361943|emb|CAJ58045.1| KNOX family class 2 homeodomain protein [Zea mays]
Length = 171
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
Query: 132 VEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPL 190
+EAVMGC E+E +LQ+LTG S GEGTG TMSDDED+ +D + +D D MGFGPL
Sbjct: 1 MEAVMGCWELEQSLQSLTGASPGEGTGGTMSDDEDN-QVDSEANMFDGNDGSDGMGFGPL 59
Query: 191 LPTETERSLMERVRQELKIELKQ 213
+ TE ERSL+ERVR+ELK ELKQ
Sbjct: 60 ILTEGERSLVERVRKELKNELKQ 82
>gi|1805619|dbj|BAA08554.1| OSH45 [Oryza sativa Japonica Group]
Length = 171
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 132 VEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPL 190
+EAVM C E+E LQ+LTG S GEGTGATMSD EDD + ++ + D D MGFG
Sbjct: 1 MEAVMACWELEQNLQSLTGASPGEGTGATMSDGEDDQADSEANMYDPSLDGADNMGFG-- 58
Query: 191 LPTETERSLMERVRQELKIELKQ 213
LPTE+ERSLMERVRQELK ELKQ
Sbjct: 59 LPTESERSLMERVRQELKHELKQ 81
>gi|28564620|dbj|BAC57787.1| OSH45 [Oryza sativa Japonica Group]
gi|38175509|dbj|BAD01204.1| OSH45 [Oryza sativa Japonica Group]
Length = 181
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 132 VEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPL 190
+EAVM C E+E LQ+LTG S GEGTGATMSD EDD + ++ + D D MGFG
Sbjct: 1 MEAVMACWELEQNLQSLTGASPGEGTGATMSDGEDDQADSEANMYDPSLDGADNMGFG-- 58
Query: 191 LPTETERSLMERVRQELKIELKQ 213
LPTE+ERSLMERVRQELK ELKQ
Sbjct: 59 LPTESERSLMERVRQELKHELKQ 81
>gi|14090235|dbj|BAA77822.2| HOS59 [Oryza sativa Japonica Group]
Length = 178
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 60/82 (73%)
Query: 132 VEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLL 191
+EAVM C E+E TLQ+LTG S EG+GATMSDDED+ S +D D MGFGPL+
Sbjct: 1 MEAVMACWELEQTLQSLTGASPREGSGATMSDDEDNQVDSESNMFDGNDGSDGMGFGPLM 60
Query: 192 PTETERSLMERVRQELKIELKQ 213
TE ERSL+ERVRQELK ELKQ
Sbjct: 61 LTEGERSLVERVRQELKHELKQ 82
>gi|242042433|ref|XP_002468611.1| hypothetical protein SORBIDRAFT_01g048970 [Sorghum bicolor]
gi|241922465|gb|EER95609.1| hypothetical protein SORBIDRAFT_01g048970 [Sorghum bicolor]
Length = 145
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 58/78 (74%), Gaps = 6/78 (7%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
QL+K EIA HPL EQL+AAHV CLRVATPID LPLIDAQLAQS +L SY + ++
Sbjct: 61 QLLKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAA------HH 114
Query: 94 NHSLSPHERQELDNFLAQ 111
LSPH++ +LD+FL +
Sbjct: 115 RPFLSPHDKHDLDSFLVR 132
>gi|224163293|ref|XP_002338542.1| predicted protein [Populus trichocarpa]
gi|222872740|gb|EEF09871.1| predicted protein [Populus trichocarpa]
Length = 156
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 148 LTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQE 206
+ GVS GEGTGATMSDDEDD D + + D D MGFGPL+PTETERSLMERVRQE
Sbjct: 1 MIGVSPGEGTGATMSDDEDDQAESDTNFNDGNLDGLDTMGFGPLVPTETERSLMERVRQE 60
Query: 207 LKIELKQ 213
LK E KQ
Sbjct: 61 LKHEFKQ 67
>gi|294460668|gb|ADE75908.1| unknown [Picea sitchensis]
Length = 174
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 132 VEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFS-LDQSASDSHDLMG-FGP 189
+EAVM C E+E +L LTGVS GEGTGATMSDDEDD + L D D +G FGP
Sbjct: 1 MEAVMACWELEQSLHTLTGVSPGEGTGATMSDDEDDQADSDTNLFDLGLDGQDGVGSFGP 60
Query: 190 LLPTETERSLMERVRQELKIELKQVMTTYI 219
L+PTE ERSLMERVRQELK ELKQ + I
Sbjct: 61 LIPTENERSLMERVRQELKHELKQGYRSRI 90
>gi|224092538|ref|XP_002309652.1| hypothetical protein POPTRDRAFT_654197 [Populus trichocarpa]
gi|222855628|gb|EEE93175.1| hypothetical protein POPTRDRAFT_654197 [Populus trichocarpa]
Length = 227
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 12/96 (12%)
Query: 14 SGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQL 73
SGGGGG V+ + + KA+I +HPLY+QLL+AHV+CLR+ATP+DQLP IDAQL
Sbjct: 142 SGGGGGEAVVNWQNAK------CKADILAHPLYDQLLSAHVACLRIATPVDQLPRIDAQL 195
Query: 74 AQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFL 109
AQS V+ Y +L ++ L P ++ ELD F+
Sbjct: 196 AQSQQVVAKYSAL-----GSHQGLVPDDK-ELDQFM 225
>gi|356554245|ref|XP_003545459.1| PREDICTED: uncharacterized protein LOC100776775 [Glycine max]
Length = 395
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 144 TLQALTGVSLGEGTGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMER 202
++ L VS GEGTGATMSDDED+ + D +L A D D MGFGPL+PTE ERSL ER
Sbjct: 21 SVSVLRRVSPGEGTGATMSDDEDEQVGSDANLFDGALDGPDSMGFGPLIPTENERSLTER 80
Query: 203 VRQELKIELKQVMT 216
VR E+K ELKQV T
Sbjct: 81 VRPEVKHELKQVAT 94
>gi|33333540|gb|AAQ11886.1| knotted 6 [Hordeum vulgare]
Length = 149
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
Query: 159 ATMSDDEDD---LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVM 215
ATMS+DED+ + M+ + +S+ HD+MGFGPL+PT+TERSLMERVRQELKIELKQ
Sbjct: 3 ATMSEDEDEGPLMIMEAAPLDMSSNGHDMMGFGPLVPTDTERSLMERVRQELKIELKQGF 62
Query: 216 TTYI 219
+ I
Sbjct: 63 KSRI 66
>gi|25446694|gb|AAN74841.1| Putative homeobox gene [Oryza sativa Japonica Group]
Length = 143
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 47/61 (77%), Gaps = 3/61 (4%)
Query: 161 MSDDEDDLH--MDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTY 218
MS+DED+ ++ +D SD HDLMGFGPL+PT++ERSLMERVRQELKIELKQ +
Sbjct: 1 MSEDEDETAPMLEGPMDM-GSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSR 59
Query: 219 I 219
I
Sbjct: 60 I 60
>gi|218775075|dbj|BAH03543.1| homeobox protein [Triticum aestivum]
Length = 337
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A V IKA+I +HPLY LLA+++ C +V P + L + A A+ L
Sbjct: 73 PADVATIKAKIMAHPLYSPLLASYLDCQKVGAPPEVLERLSAVAAK----------LDAG 122
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ H SP ELD F+ Y +L ++E+L + ++ EA + +E L ++T
Sbjct: 123 HGRGKHE-SPRPDPELDQFMEAYCNMLAKYREELARPIQ----EATEFFKSVETQLDSIT 177
Query: 150 GVSLGEGTGATMSDDEDDLHMDFSLDQSASDS 181
GA S+DE D +D SA D
Sbjct: 178 FTDSTNCEGAGSSEDELDTSCVEEIDPSAEDK 209
>gi|357134921|ref|XP_003569063.1| PREDICTED: homeobox protein knotted-1-like 1-like [Brachypodium
distachyon]
Length = 300
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 17/122 (13%)
Query: 10 GSSSSGGGGGGGDVSG------HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPI 63
G S GGG + SG D TAT +L KA+IA+HP Y LL+A++ C +V P
Sbjct: 10 GISRGGGGAACSEASGVAGSPPPPDLTATAELTKAQIAAHPRYPSLLSAYIECRKVGAPP 69
Query: 64 DQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
D L++ + R +A L P ELD F+ Y VL +KE+L
Sbjct: 70 DVAVLLE-------EMSRERRPGYEAAGAGEIGLDP----ELDEFMEAYCRVLWRYKEEL 118
Query: 124 QQ 125
+
Sbjct: 119 SR 120
>gi|357113910|ref|XP_003558744.1| PREDICTED: homeobox protein knotted-1-like 8-like [Brachypodium
distachyon]
Length = 345
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 25 GHHDQT-----ATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHV 79
GHH + +KA+I +HPLY LLA+++ C +V P D L + A A+
Sbjct: 70 GHHKDGEISPGPDAEAVKAKIMAHPLYSPLLASYLDCHKVGAPPDVLDRLSAVAAK---- 125
Query: 80 LRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCR 139
L A H P ELD F+ Y +L ++E+L + + EA R
Sbjct: 126 -----QLDAAAERRRHREPPRVDPELDQFMEAYCNMLAKYREELARPI----WEATEFFR 176
Query: 140 EIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD---SHDLM-GFGPLLPTET 195
+E L ++T S EG G+ S+D+ D +D SA D H L+ +G + +
Sbjct: 177 SVETQLDSITADSNCEGAGS--SEDDLDTSCAEEIDPSAEDRELKHQLLRKYGGYVGSLR 234
Query: 196 ERSLMERVRQELKIELKQVMTTYIYIYIYINITITTQ 232
+ R + +L E +Q + + ++ T+
Sbjct: 235 QEFCKRRKKGKLPKEARQKLLQWWELHCKWPYPSETE 271
>gi|226529576|ref|NP_001149876.1| KNOX1 domain containing protein [Zea mays]
gi|195635197|gb|ACG37067.1| KNOX1 domain containing protein [Zea mays]
Length = 360
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 29/180 (16%)
Query: 4 PSLGVMGSSSSGGGGG----GGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRV 59
PS G + G G V+GH + A + +KA+I SHP Y +LLAA + C +V
Sbjct: 39 PSSAATGREARGQGVAPMMHASSVAGHGGRAADLDPVKAKIVSHPSYHRLLAAFLDCHKV 98
Query: 60 ATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTF 119
P + I V R + Q+A + + P ELD F+ Y +L T+
Sbjct: 99 GCPPEAAEEIXX-------VAREREAWQRAASGDVAHTRPD--PELDQFMESYCELLVTW 149
Query: 120 KEQLQQHVRVHAVEAVMGCREIENTLQAL--TGVSLG---------EGTGAT-MSDDEDD 167
KE+L + +R EA +E L ++ TG ++G + TG MSDDE +
Sbjct: 150 KEELTRPLR----EAEEFLTTVEAQLNSITNTGPTMGAFISSAAAADKTGVVDMSDDEQE 205
>gi|388512137|gb|AFK44130.1| unknown [Lotus japonicus]
Length = 299
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 48/208 (23%)
Query: 1 MQEPSLGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVA 60
M+EP G+ GS S +LIK++IASHPLY L++A++ C +V
Sbjct: 39 MEEPEPGLTGSEMSD------------------RLIKSQIASHPLYPNLVSAYIECQKVG 80
Query: 61 TPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFK 120
P + P ++ ++A+ +H N++N + ELD F+ Y VL ++
Sbjct: 81 APTELAPFLE-EIARENH-----------NSSNGFGREIGDDPELDEFMESYCEVLQRYQ 128
Query: 121 EQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD 180
++L + EA + +IE+ L L +L TM D + D++A
Sbjct: 129 QELFKPFN----EATLFLCDIESQLSELCKGTL------TMPSDNN------RSDEAAGT 172
Query: 181 SHDLMGFGPLLPTETERSLMERVRQELK 208
S D + G + E S M + QELK
Sbjct: 173 SEDELSCGKV--EAVEYSGMRQGDQELK 198
>gi|326524884|dbj|BAK04378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 337
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 31 ATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN 90
A IKA+I +HPLY LLA+++ C +V P + L + A A+ L +
Sbjct: 74 ADAATIKAKIMAHPLYSPLLASYLDCQKVGAPPEVLERLSAVAAK----------LDAGH 123
Query: 91 NNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTG 150
H +P ELD F+ Y +L ++E+L + ++ EA + +E L ++T
Sbjct: 124 GRGQHE-APRPDPELDQFMEAYCNMLVKYREELARPIQ----EATEFFKSVETQLDSITF 178
Query: 151 VSLGEGTGATMSDDEDDLHMDFSLDQSASDS 181
GA S+D+ D +D SA D
Sbjct: 179 TDSTNCEGAGSSEDDLDASCVEEIDPSAEDK 209
>gi|33333544|gb|AAQ11888.1| knotted 1 [Nicotiana tabacum]
Length = 327
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 16/119 (13%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
LIKA+IA+HPLY LL+A++ C +V TP + +++ ++++ +H++ S
Sbjct: 56 LIKAQIANHPLYPNLLSAYLQCRKVGTPQEMASILE-EISKENHLISSC----------- 103
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
H+ ELD+F+ Y VL +KE+L + EA IE+ L +L +L
Sbjct: 104 HNTEIGTDPELDDFMESYCAVLLKYKEELSKPFD----EATTFLNNIESQLSSLCKENL 158
>gi|371767716|gb|AEX56213.1| knotted-like 3 protein, partial [Dactylorhiza fuchsii]
Length = 287
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 28/161 (17%)
Query: 4 PSLGVMGSSSSGGGG---------------GGGDVSGHHDQTATVQLIKAEIASHPLYEQ 48
P++GV ++SS GG + S +A V +KA+I SHP Y
Sbjct: 21 PAVGVQPTASSAGGASFFYGVSTQNPNPNPAKVEPSSSTHFSADVDSVKAKIISHPQYPA 80
Query: 49 LLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNF 108
LL A++ C +V P P + A+L+ + H L +Q SP + ELD F
Sbjct: 81 LLTAYMDCQKVGAP----PEVIARLSAAAHELEG----RQLAALGCRRGSPAD-PELDQF 131
Query: 109 LAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ Y +L +KEQL + V+ EA+ R+IE+ L +LT
Sbjct: 132 MEAYCNMLVKYKEQLTRPVQ----EAMDFLRKIESQLNSLT 168
>gi|218193820|gb|EEC76247.1| hypothetical protein OsI_13685 [Oryza sativa Indica Group]
Length = 559
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 22/138 (15%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KAEI SHP Y LLAA++ C +V P D L + A A QQ + + H
Sbjct: 289 VKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPA-----------AQQLDEADGH 337
Query: 96 SLSPHERQ------ELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
HE Q +LD F+ Y +L ++E+L++ ++ EA +E L +L
Sbjct: 338 PRRLHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPIQ----EAAEFFSRVETQLDSLA 393
Query: 150 GVSLGEGTGATMSDDEDD 167
S EGTG++ + + D
Sbjct: 394 -ESNCEGTGSSEEEQDQD 410
>gi|115455613|ref|NP_001051407.1| Os03g0771500 [Oryza sativa Japonica Group]
gi|122246824|sp|Q10ED2.1|KNOS8_ORYSJ RecName: Full=Homeobox protein knotted-1-like 8; AltName:
Full=Homeobox protein OSH43
gi|5103727|dbj|BAA79225.1| knotted1-type homeobox protein OSH43 [Oryza sativa]
gi|108711297|gb|ABF99092.1| KNOX1 domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549878|dbj|BAF13321.1| Os03g0771500 [Oryza sativa Japonica Group]
Length = 341
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 24/138 (17%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KAEI SHP Y LLAA++ C +V P D L + A A QQ + + H
Sbjct: 83 VKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPA-----------AQQLDEADGH 131
Query: 96 SLSPHERQ------ELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
HE Q +LD F+ Y +L ++E+L++ + +EA +E L +L
Sbjct: 132 PRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSRVETQLDSLA 187
Query: 150 GVSLGEGTGATMSDDEDD 167
S EGTG+ S++E D
Sbjct: 188 -ESNCEGTGS--SEEEQD 202
>gi|4589449|dbj|BAA76750.1| KN1-type homeobox protein [Nicotiana tabacum]
Length = 327
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 16/119 (13%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
LIKA+IA+HPLY LL+A++ C +V P + +++ ++++ +H++ S
Sbjct: 56 LIKAQIANHPLYPNLLSAYLQCRKVGAPQEMASILE-EISKENHLISS-----------G 103
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
H+ ELD+F+ Y VL +KE+L + EA IE+ L +L +L
Sbjct: 104 HNTEIGTDPELDDFMESYCAVLLKYKEELSKPFD----EATTFLNNIESQLSSLCKENL 158
>gi|222625875|gb|EEE60007.1| hypothetical protein OsJ_12748 [Oryza sativa Japonica Group]
Length = 341
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 24/138 (17%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KAEI SHP Y LLAA++ C +V P D L + A A QQ + + H
Sbjct: 83 VKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPA-----------AQQLDEADGH 131
Query: 96 SLSPHERQ------ELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
HE Q +LD F+ Y +L ++E+L++ + +EA +E L +L
Sbjct: 132 PRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSRVETQLDSLA 187
Query: 150 GVSLGEGTGATMSDDEDD 167
+ EGTG+ S++E D
Sbjct: 188 ESNC-EGTGS--SEEEQD 202
>gi|50872441|gb|AAT85041.1| knotted1-type homeobox protein [Oryza sativa Japonica Group]
gi|108711298|gb|ABF99093.1| KNOX1 domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215741530|dbj|BAG98025.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 336
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 21/126 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KAEI SHP Y LLAA++ C +V P D L + A A QQ + + H
Sbjct: 83 VKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPA-----------AQQLDEADGH 131
Query: 96 SLSPHERQ------ELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
HE Q +LD F+ Y +L ++E+L++ + +EA +E L +L
Sbjct: 132 PRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSRVETQLDSLA 187
Query: 150 GVSLGE 155
G E
Sbjct: 188 GTGSSE 193
>gi|55416167|gb|AAV50045.1| homeobox protein [Saccharum hybrid cultivar Pindar]
Length = 315
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 75/182 (41%), Gaps = 26/182 (14%)
Query: 7 GVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQL 66
G +S+ G G GG + +L+KA+IASHP Y LL+A++ C +V P
Sbjct: 16 GAASEASTAGVGAGGP-----SPSDLTELMKAQIASHPRYPSLLSAYIECRKVGAP---- 66
Query: 67 PLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQH 126
P + A L + RS G A + P ELD F+ Y VL +KE+L +
Sbjct: 67 PQV-ASLLEEVSRERSPG----AAGAGEIGVDP----ELDEFMDSYCRVLVRYKEELSRP 117
Query: 127 VRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMG 186
EA I+ L L AT SDD M S D+ S D+
Sbjct: 118 FD----EAASFLSSIQAQLSNLCSAGSSPAATATHSDD----MMGSSEDEQCSGDTDVPD 169
Query: 187 FG 188
G
Sbjct: 170 IG 171
>gi|356554468|ref|XP_003545568.1| PREDICTED: homeobox protein SBH1-like isoform 1 [Glycine max]
Length = 325
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 80/156 (51%), Gaps = 16/156 (10%)
Query: 25 GHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYG 84
HH+ T T ++ +I +HPL+ +LL+++++CL+V P P + A L +S S+
Sbjct: 68 SHHNPTDTCS-VRDKIMAHPLFPRLLSSYLNCLKVGAP----PEVVASLEESCAKCESFN 122
Query: 85 SLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENT 144
+ ++ S E LD F+ Y +L ++++L + + EA++ IE
Sbjct: 123 A-----SSGRTGGSIGEDPALDQFMEAYCEMLIKYEQELTKPFK----EAMLFFSRIECQ 173
Query: 145 LQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD 180
L+AL VS G T S +E D+H + +LD A D
Sbjct: 174 LKAL-AVSSDFGQSETSSQNEVDVHEN-NLDSQAED 207
>gi|28195122|gb|AAO33774.1| knotted protein TKN4 [Solanum lycopersicum]
Length = 335
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
Query: 20 GGDVSGHHDQTATV----QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQ 75
D + H + T + LIKA+IA+HPLY LL+A++ C +V P + ++D ++++
Sbjct: 56 AADHNHHQNNTKSTTNMSDLIKAQIANHPLYPNLLSAYLQCRKVGAPQEMTSILD-EISK 114
Query: 76 SHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAV 135
++++ S + HS ELD F+ Y VL +KE+ + EA
Sbjct: 115 ENNLISS----------SRHSSEIGADPELDEFMESYCAVLVKYKEEFSKPFD----EAT 160
Query: 136 MGCREIENTLQALTGVSL 153
IE+ L +L +L
Sbjct: 161 SFLSNIESQLSSLCKDNL 178
>gi|31323451|gb|AAP47027.1|AF375968_1 knotted homeodomain protein 4, partial [Solanum lycopersicum]
Length = 338
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 19/138 (13%)
Query: 20 GGDVSGHHDQTATV----QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQ 75
D + H + T + LIKA+IA+HPLY LL+A++ C +V P + ++D ++++
Sbjct: 59 AADHNHHQNNTKSTTNMSDLIKAQIANHPLYPNLLSAYLQCRKVGAPQEMTSILD-EISK 117
Query: 76 SHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAV 135
++++ S + HS ELD F+ Y VL +KE+ + EA
Sbjct: 118 ENNLISS----------SRHSSEIGADPELDEFMESYCAVLVKYKEEFSKPFD----EAT 163
Query: 136 MGCREIENTLQALTGVSL 153
IE+ L +L +L
Sbjct: 164 SFLSNIESQLSSLCKDNL 181
>gi|6016215|sp|O04134.1|KNAP1_MALDO RecName: Full=Homeobox protein knotted-1-like 1; AltName:
Full=KNAP1
gi|1946218|emb|CAA96510.1| kn1-like protein [Malus x domestica]
Length = 398
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V+ IKA+I +HP Y L+ A++ C RV P D +P + + RS G+ ++ + +
Sbjct: 130 VEAIKAKIIAHPQYSNLVEAYMDCQRVGAPSDVVPRLSVARQEFEARQRSSGTSRETSKD 189
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
ELD F+ Y +L ++E+L + ++ EA+ R IE L L
Sbjct: 190 ----------PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNML 231
>gi|307335622|gb|ADN43388.1| KNOX1 [Agave tequilana]
Length = 357
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 21/142 (14%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+IKA+I SHP Y LL A++ C +V P + A+L+ V R + QQA+ +
Sbjct: 88 IIKAKIISHPHYSALLGAYMDCQKVGAS----PEVAARLSA---VAREIEARQQASMSCR 140
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLG 154
S E ELD F+ Y +L ++E+L + ++ EA+ R +E+ L +LT +
Sbjct: 141 RDASSAEDPELDQFMEAYCNMLVKYREELTRPLQ----EAMNFFRGVESQLNSLTNGATA 196
Query: 155 ----------EGTGATMSDDED 166
EG G + D +D
Sbjct: 197 SIFSAADEKCEGVGFSEEDQDD 218
>gi|160420034|dbj|BAF93480.1| class-I knotted1-like homeobox protein IBKN3 [Ipomoea batatas]
Length = 266
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 21/143 (14%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
++ IKA+I +HP Y LL A++ C +V P P + A+LA V + + + Q+A
Sbjct: 1 MEAIKAKIIAHPQYSNLLEAYMDCQKVGAP----PEVVARLAA---VRQEFEARQRAAGL 53
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
+S + ELD F+ Y +L ++E+L + ++ EA+ R IE+ L L+
Sbjct: 54 GGRDISSKD-PELDQFMEAYYDMLVKYREELTRPLQ----EAMEFMRRIESQLNMLSNAP 108
Query: 153 LG--------EGTGATMSDDEDD 167
+ EG G++ DD+D+
Sbjct: 109 VRVFTSDDKCEGVGSS-EDDQDN 130
>gi|357115393|ref|XP_003559473.1| PREDICTED: homeobox protein KNOX3-like [Brachypodium distachyon]
Length = 429
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 14/120 (11%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A V+ IKA+I SHP+Y LLAA++ CL+V P P + +++ V R Q+A
Sbjct: 167 AADVEAIKAKIISHPIYPSLLAAYLDCLKVGAP----PEVSERMSA---VARDLELRQRA 219
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
L+ ELD F+ Y +L ++E+L + ++ EA+ R +E+ L +L+
Sbjct: 220 GLGG---LAAATEPELDQFMEAYSEMLVKYREELTRPLQ----EAMEFLRRVESQLNSLS 272
>gi|85543304|gb|ABC71532.1| KNOTTED1-like homeodomain protein [Pharus lappulaceus]
Length = 336
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 17 GGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQS 76
GG D S A V+ IKA+I SHP Y LLAA++ C +V P P + +L
Sbjct: 66 GGKAKDPSSSSSYAADVEAIKAKIISHPHYSSLLAAYLDCQKVGAP----PEVATRLTAV 121
Query: 77 HHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVM 136
H L + + A ++ P ELD F+ Y +L ++E+L + ++ EA+
Sbjct: 122 AHELEA--RQRTALGGLGAAMEP----ELDQFMEAYHEMLVKYREELARPLQ----EAME 171
Query: 137 GCREIENTLQALT 149
R++E L +L+
Sbjct: 172 FLRKVELQLNSLS 184
>gi|25386225|pir||A96729 homeotic protein (ATK1), 26548-32058 [imported] - Arabidopsis
thaliana
gi|12325041|gb|AAG52468.1|AC010796_7 homeotic protein (ATK1); 26548-32058 [Arabidopsis thaliana]
Length = 311
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 25/162 (15%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +IK++IASHPLY +LL ++ C +V P++ +++ ++H R L
Sbjct: 65 SLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSCFGA 124
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL--- 148
+ ELD F+ Y +L +K L + EA +IE LQ L
Sbjct: 125 D----------PELDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCTG 170
Query: 149 --TGVSLGEGTGATMSDDE----DDLHMDFSLDQSASDSHDL 184
+ +L GA SD+E DD+ D S Q S+ DL
Sbjct: 171 PASATALSADDGAVSSDEELREDDDIAADDS--QQRSNDRDL 210
>gi|295149268|gb|ADF81047.1| KNOTTED-like homebox protein 2 [Cocos nucifera]
Length = 317
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 12 SSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDA 71
S SGG D+SG T LIKA+IASHP Y L++A++ C +V P + L
Sbjct: 34 SHSGGAAEASDISGGGGSDLT-DLIKAQIASHPRYPSLVSAYIECRKVGAPPEMASL--- 89
Query: 72 QLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
L G + + P ELD F+ Y VL +KE+L +
Sbjct: 90 --------LEEIGRRRYTSAGGEIGADP----ELDEFMESYCRVLQRYKEELSK 131
>gi|211926930|dbj|BAG82674.1| KN1-type homeobox transcription factor [Triticum aestivum]
Length = 306
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 7 GVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQL 66
G S +SG GG +L+KA+IA HP Y LL+A++ C +V P
Sbjct: 18 GAACSEASGVAGGASSPPPPPPPADLTELMKAQIAGHPRYPSLLSAYIECRKVGAP---- 73
Query: 67 PLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
P + A L + R G A L P ELD F+ Y +L +KE+L +
Sbjct: 74 PEVAALLEEIGQPERRGGGATAAGEIG---LDP----ELDEFMEAYCRLLSRYKEELSR 125
>gi|3327275|dbj|BAA31701.1| PKn3 [Ipomoea nil]
Length = 358
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 21/108 (19%)
Query: 18 GGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSH 77
GGGG V D ++KA+IASHPLY L++A++ C +VA P P + A L +
Sbjct: 87 GGGGGVEMMSD------VVKAQIASHPLYPNLVSAYIQCRKVAAP----PEMAALLEELS 136
Query: 78 HVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
V + + + + ELD F+ Y VL +KE+L +
Sbjct: 137 KVTQPITTAEIGAD-----------PELDEFMESYCEVLYKYKEELSK 173
>gi|33333531|gb|AAQ11882.1| knotted 1 [Hordeum vulgare]
Length = 349
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 28/147 (19%)
Query: 31 ATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQ--SHHVLRSYGSLQQ 88
A + IK +I +HP Y LL A++ C +V P D L + A A+ +H + G L +
Sbjct: 83 AEAEAIKTKIMAHPQYTALLVAYLDCQKVGAPPDVLERLTAMAAKLDAH----TPGRLHE 138
Query: 89 ANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
A + ELD F+ Y +L ++E+L + + EA+ + +E L ++
Sbjct: 139 ARD-----------PELDQFMEAYCNMLAKYREELTRPIE----EAMEFLKRVEAQLDSI 183
Query: 149 TG-------VSLGEGTGATMSDDEDDL 168
TG +SL G + EDD+
Sbjct: 184 TGGGHGSAPLSLAAGKYEGVGSSEDDM 210
>gi|300676309|gb|ADK26524.1| HERMIT-like protein 3 [Petunia x hybrida]
Length = 331
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
LIKA+IA+HPLY L++A++ C +V P + +++ ++H + S S
Sbjct: 59 LIKAQIANHPLYPNLVSAYLQCRKVGAPHEMASILEEISKENHQPISSCHS--------- 109
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
S+ ELD F+ Y VL +KE+L +
Sbjct: 110 -SIEIGTDPELDEFMESYCAVLLKYKEELSK 139
>gi|189046914|dbj|BAG34610.1| class-I knotted1-like homeobox protein IBKN4 [Ipomoea batatas]
Length = 314
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 5 SLGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPID 64
++ + G+S+ GG + D+ + +IKA+IASHP Y +LL A++ C +V P +
Sbjct: 48 TIPLCGASTEVAAGGD-----NEDKDVSSVMIKAKIASHPCYPKLLHAYIDCQKVGAPPE 102
Query: 65 QLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQ 124
++D ++ + LR G ++ P ELD F+ Y +L +K L
Sbjct: 103 IATVLD-EIRREDDELRKRGGGGGGAVSSCLGADP----ELDEFMETYYDMLVKYKSDLS 157
Query: 125 QHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDED 166
+ EA IE L L + +G SD+ED
Sbjct: 158 RPFH----EATTFLNTIETQLSNL----CKDESGGASSDEED 191
>gi|242033113|ref|XP_002463951.1| hypothetical protein SORBIDRAFT_01g009460 [Sorghum bicolor]
gi|241917805|gb|EER90949.1| hypothetical protein SORBIDRAFT_01g009460 [Sorghum bicolor]
Length = 372
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 19/164 (11%)
Query: 12 SSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDA 71
+SS GG GG V+ D IKA+I SHP Y +LLAA + C +V P P
Sbjct: 67 ASSSVGGHGGRVADLLDP------IKAKIVSHPRYHRLLAAFLDCHKVGCP----PEAAE 116
Query: 72 QLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHA 131
++A + ++ Q+A + H+ P ELD F+ Y +L +KE+L + +R
Sbjct: 117 EIAAAAREREAW---QRAAVGDAHNTRPD--PELDQFMESYSELLVAWKEELTRPLR--- 168
Query: 132 VEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLD 175
EA +E L ++T G + + ED+ +D S D
Sbjct: 169 -EAKEFLTTVELQLNSITNTGPPMGALISSAAAEDNTGLDMSDD 211
>gi|6016217|sp|O04135.1|KNAP2_MALDO RecName: Full=Homeobox protein knotted-1-like 2; AltName:
Full=KNAP2
gi|1946220|emb|CAA96511.1| kn1-like protein [Malus x domestica]
Length = 397
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V+ IKA+I +HP Y LL A++ C RV P D + + + RS G+ ++
Sbjct: 129 VEAIKAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLSVARQEFEARQRSSGTSRET--- 185
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
S P ELD F+ Y +L ++E+L + ++ EA+ R IE L L
Sbjct: 186 ---SKDP----ELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNML 230
>gi|302398857|gb|ADL36723.1| HD domain class transcription factor [Malus x domestica]
Length = 397
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V+ IKA+I +HP Y LL A++ C RV P D + + + RS G+ ++
Sbjct: 129 VEAIKAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLSVARQEFEARQRSSGTSRET--- 185
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
S P ELD F+ Y +L ++E+L + ++ EA+ R IE L L
Sbjct: 186 ---SKDP----ELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNML 230
>gi|132424653|gb|ABO33479.1| class I KNOX homeobox transcription factor [Medicago truncatula]
Length = 288
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN-N 91
+ IKA+I +HP Y LL A++ C ++ P P + A+L S + + Q+++ N
Sbjct: 25 AEAIKAKIIAHPQYSSLLQAYMDCQKIGAP----PEVVARLVASRQ---EFEARQRSSVN 77
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGV 151
+ S P ELD F+ Y +L ++E+L + ++ EA+ R IE L L
Sbjct: 78 SRETSKDP----ELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNTLCNG 129
Query: 152 SL-------GEGTGATMSDDED 166
L EG G++ D E+
Sbjct: 130 PLRIFPDDKNEGVGSSEEDQEN 151
>gi|359485634|ref|XP_002273805.2| PREDICTED: homeobox protein SBH1-like, partial [Vitis vinifera]
Length = 358
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 18 GGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSH 77
G + + +HD T+ +KA+I +HP Y +LLAA+V+C +V P + + ++ A
Sbjct: 90 GSNSNTTNNHDCTSCS--MKAKIMAHPHYPRLLAAYVNCQKVGAPPEVVARLEEACASEE 147
Query: 78 HVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMG 137
+ RS S E LD F+ Y +L ++++L + + EA++
Sbjct: 148 AMGRSATSCV------------GEDPALDQFMEAYCEMLTKYEQELTKPFK----EAMLF 191
Query: 138 CREIENTLQALTGVS----LGEGTGATMSDDEDDLHMDFSLDQSASD 180
IE +ALT G G S +E+ D +D A D
Sbjct: 192 LSRIECQFKALTVAPSDSVCGSYAGRVGSSEEEVDGNDTCIDPQAED 238
>gi|147800378|emb|CAN64264.1| hypothetical protein VITISV_033719 [Vitis vinifera]
Length = 359
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 18 GGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSH 77
G + + +HD T+ +KA+I +HP Y +LLAA+V+C +V P + + ++ A
Sbjct: 91 GSNSNTTNNHDCTSCS--MKAKIMAHPHYPRLLAAYVNCQKVGAPPEVVARLEEACASEE 148
Query: 78 HVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMG 137
+ RS S E LD F+ Y +L ++++L + + EA++
Sbjct: 149 AMGRSATSCV------------GEDPALDQFMEAYCEMLTKYEQELTKPFK----EAMLF 192
Query: 138 CREIENTLQALTGVS----LGEGTGATMSDDEDDLHMDFSLDQSASD 180
IE +ALT G G S +E+ D +D A D
Sbjct: 193 LSRIECQFKALTVAPSDSVCGSYAGRVGSSEEEVDGNDTCIDPQAED 239
>gi|3327271|dbj|BAA31699.1| PKn2 [Ipomoea nil]
Length = 322
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 16/162 (9%)
Query: 5 SLGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPID 64
++ G+S+ V D ++V +IKA+IASHP Y +LL A++ C +V P +
Sbjct: 53 TIPFCGASTEVAAATTTCVDNEDDDVSSV-MIKAKIASHPCYPKLLHAYIDCQKVGAPPE 111
Query: 65 QLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQ 124
++D + R L++ S ELD F+ Y +L +K L
Sbjct: 112 IATVLD-------EIRREDDELRKRGGGGAVSSCLGADPELDEFMETYYDMLVKYKSDLS 164
Query: 125 QHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDED 166
+ EA IE L L + +GA SD+ED
Sbjct: 165 KPFH----EATTFLNTIETQLSNL----CKDESGAVSSDEED 198
>gi|168831394|gb|ACA34978.1| KNOX1 [Streptocarpus rexii]
Length = 358
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 26 HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGS 85
H D T V IKA+I +HP Y LL A++ C RV P P + A+L +
Sbjct: 87 HQDHT-EVDAIKAKIIAHPQYSNLLEAYLDCQRVGAP----PEVVARLTAVRQEFEARQR 141
Query: 86 LQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTL 145
A + ++ S P ELD F+ Y +L ++E+L + ++ EA+ R IE+ L
Sbjct: 142 AGGAADRDHVSKDP----ELDQFMEAYYDMLVKYREELSRPLQ----EAMEFMRRIESQL 193
Query: 146 QALTGVSL 153
+T +
Sbjct: 194 NMITNCPV 201
>gi|297838847|ref|XP_002887305.1| hypothetical protein ARALYDRAFT_476175 [Arabidopsis lyrata subsp.
lyrata]
gi|297333146|gb|EFH63564.1| hypothetical protein ARALYDRAFT_476175 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 19/138 (13%)
Query: 28 DQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVL-RSYGSL 86
D ++ +IK++IA HPLY +LL ++ C +V P+ ++ I ++ Q +HV R L
Sbjct: 60 DDNFSLSVIKSKIACHPLYPRLLQTYIDCQKVGAPM-EIACILEEIQQENHVYKRDVAPL 118
Query: 87 QQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQ 146
++ ELD F+ Y +L +K L + EA +IE LQ
Sbjct: 119 SCFGDD----------PELDEFMETYCDILVKYKTDLARPFD----EAATFINKIEMQLQ 164
Query: 147 ALTGVSLGEGTGATMSDD 164
L G + +SDD
Sbjct: 165 NLCT---GPASATALSDD 179
>gi|225450589|ref|XP_002277931.1| PREDICTED: homeobox protein knotted-1-like 1 [Vitis vinifera]
gi|147820996|emb|CAN77695.1| hypothetical protein VITISV_015614 [Vitis vinifera]
gi|296089776|emb|CBI39595.3| unnamed protein product [Vitis vinifera]
Length = 310
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 29/186 (15%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
LIK++I +HP Y L++A++ C +V P + L L G Q N+ +
Sbjct: 50 LIKSQIVNHPRYPNLVSAYIECRKVGAPPEMASL-----------LEEIGRESQPMNSRS 98
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLG 154
+ ELD F+ Y VL +KE+L + EA +IE+ L L +L
Sbjct: 99 GEIGAD--PELDEFMESYCEVLHRYKEELSKPFD----EATSFLSDIESQLSNLCKGALT 152
Query: 155 EGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERV-RQELKIELKQ 213
GT + + D++A S + + G +E++ SL R QELK L +
Sbjct: 153 AGTSGS-----------YYSDEAAGTSEEELSCGEAEVSESQESLGARPGDQELKEMLMR 201
Query: 214 VMTTYI 219
+ Y+
Sbjct: 202 KYSGYL 207
>gi|255568864|ref|XP_002525403.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223535366|gb|EEF37041.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 337
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 28 DQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQ 87
D+ + LIKA+IASHP Y +LL A++ C +V P + L+D ++ + + + + G
Sbjct: 88 DEDSMSTLIKAKIASHPSYPRLLHAYIDCQKVGAPPEIAGLLD-EIRRENDMYKGDGGAA 146
Query: 88 QANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQA 147
S ELD F+ Y VL +K L++ EA +IE L+
Sbjct: 147 --------STCVGADPELDEFMETYCDVLLKYKSDLEKPFD----EATTFLNKIEMQLRN 194
Query: 148 L-TGVSLG--EGTGATMSDDE 165
L TG S+ GA SD+E
Sbjct: 195 LCTGASVSTLSDEGAPSSDEE 215
>gi|20977646|gb|AAM28232.1| knotted-1-like protein 2 [Helianthus annuus]
Length = 358
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
+ +KA+I SHP Y LL A++ C +V P + + + A V + Y + Q+AN
Sbjct: 83 EALKAKIISHPHYSNLLQAYMDCQKVGAPPEVVGRLTA-------VRQEYEARQRANLGC 135
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ ++ ELD F+ Y +L +KE+L + ++ EA+ R IE+ L LT
Sbjct: 136 REN---YKDPELDQFMEAYYDMLIKYKEELTRPIQ----EAMEFMRRIESQLSTLT 184
>gi|414872579|tpg|DAA51136.1| TPA: knotted homeobox3 [Zea mays]
Length = 193
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 23 VSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRS 82
V+GH + A + +KA+I SHP Y +LLAA + C +V P P ++A +
Sbjct: 62 VAGHGGRAADLDPVKAKIVSHPSYHRLLAAFLDCHKVGCP----PEAAEEIAAVAREREA 117
Query: 83 YGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVR 128
+ Q+A + P ELD F+ Y +L T+KE+L + +R
Sbjct: 118 W---QRAAAGDVAHTRPD--PELDQFMESYCELLVTWKEELTRPLR 158
>gi|302398825|gb|ADL36707.1| HD domain class transcription factor [Malus x domestica]
Length = 398
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V+ IKA+I +HP Y L+ A++ C R P D +P + + RS G+ ++ + +
Sbjct: 130 VEAIKAKIIAHPQYSNLVEAYMDCQRGGAPSDVVPRLSVARQEFEARQRSSGTSRETSKD 189
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
ELD F+ Y +L ++E+L + ++ EA+ R IE L L
Sbjct: 190 ----------PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNML 231
>gi|224118100|ref|XP_002331558.1| predicted protein [Populus trichocarpa]
gi|222873782|gb|EEF10913.1| predicted protein [Populus trichocarpa]
Length = 369
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 22/160 (13%)
Query: 26 HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGS 85
++D ++ +KA+I +HP Y +LLAA+ +C +V P P + A+L ++ S S
Sbjct: 107 NNDGGSSSTSVKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEA---CASAAS 159
Query: 86 LQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTL 145
+ AN + E LD F+ Y +L ++++L + ++ EA++ + +E
Sbjct: 160 MGPANTD-----GIGEDPALDQFMEAYCEMLTKYEQELSKPLK----EAMVFLQRVECQF 210
Query: 146 QALT----GVSLGEGTGATMSDDED-DLHMDFSLDQSASD 180
+ALT + GEG S +E+ D++ F +D A D
Sbjct: 211 RALTLSSPNSAWGEGNDRNASSEEELDVNNKF-IDPQAED 249
>gi|429326570|gb|AFZ78625.1| knotted-like protein [Populus tomentosa]
Length = 368
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 25/144 (17%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN-N 91
V+ IKA+I +HP Y LL A++ C +V P P + A+LA + + + S Q++
Sbjct: 105 VEAIKAKIIAHPQYSNLLEAYMDCQKVGAP----PEVVARLAAAR---QEFESRQRSFIT 157
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGV 151
+ ++S P ELD F+ Y +L ++E+L + ++ EA+ R IE L +
Sbjct: 158 SRDNSKDP----ELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMICHG 209
Query: 152 SL--------GEGTGATMSDDEDD 167
L EG G++ DD+D+
Sbjct: 210 PLRIFNSDDKSEGVGSS-EDDQDN 232
>gi|27413549|gb|AAO11694.1| Knotted-1-like homeobox protein H1 [Nicotiana tabacum]
Length = 343
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 26 HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGS 85
H D + IK++I +HP Y +LL+A+V+C ++ P + + ++ A S + R+ G
Sbjct: 77 HEDANCSSTSIKSKIMAHPHYPRLLSAYVNCQKIGAPPEVVARLEEVCATSATIGRNSGG 136
Query: 86 LQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTL 145
+ E LD F+ Y +L ++++L + + EA++ IE
Sbjct: 137 II------------GEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQF 180
Query: 146 QALTGVSLGEGTGA 159
+ALT S E A
Sbjct: 181 KALTLTSSSESVAA 194
>gi|300676315|gb|ADK26527.1| HERMIT-like protein 1 [Petunia x hybrida]
Length = 322
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 16/137 (11%)
Query: 28 DQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQ 87
DQ T+ I+A I+SHPLY +LL +++ C +V P + + ++D + ++ +S +L
Sbjct: 70 DQDETMN-IRANISSHPLYPKLLRSYIDCQKVGAPSEIVNMLDNIVQENDVYKKSSTALN 128
Query: 88 QANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQA 147
+ ++ ELD F+ Y VL FK L + EA + IE L
Sbjct: 129 RLTDD----------PELDEFMETYCEVLAKFKSDLARPFN----EATIFLNNIETQLSN 174
Query: 148 LTGVSLGEGTGATMSDD 164
L ++ T SD+
Sbjct: 175 L-WINAAPTTSNITSDE 190
>gi|56236458|gb|AAV84585.1| knotted-like homeobox protein [Populus tomentosa]
Length = 368
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 25/144 (17%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN-N 91
V+ IKA+I +HP Y LL A++ C +V P P + A+LA + + + S Q++
Sbjct: 105 VEAIKAKIIAHPQYSNLLEAYMDCQKVGAP----PEVVARLAAAR---QEFESRQRSFIT 157
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGV 151
+ ++S P ELD F+ Y +L ++E+L + ++ EA+ R IE L +
Sbjct: 158 SRDNSKDP----ELDQFMEAYCDMLVKYREELTRPIQ----EAMDFMRRIETQLNMICHG 209
Query: 152 SL--------GEGTGATMSDDEDD 167
L EG G++ DD+D+
Sbjct: 210 PLRIFNSDDKSEGVGSS-EDDQDN 232
>gi|85543290|gb|ABC71525.1| KNOTTED1 homeodomain protein [Sorghum bicolor]
Length = 348
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 21 GDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVL 80
G+ S ++ IKA+I SHP Y LLAA++ C +V P D + A +AQ
Sbjct: 84 GEPSSSSPYAGDLEAIKAKIISHPHYYSLLAAYLECKKVGAPPDVSARLTA-MAQ----- 137
Query: 81 RSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCRE 140
L+ L ELD F+ Y +L FKE+L + ++ EA+ R
Sbjct: 138 ----ELEARQRTALSGLGAATEPELDQFMEAYHEMLVKFKEELTRPLQ----EAMEFMRR 189
Query: 141 IENTLQALT 149
+E+ L +L+
Sbjct: 190 VESQLNSLS 198
>gi|54042995|gb|AAV28488.1| homeodomain protein ARBORKNOX1 [Populus tremula x Populus alba]
Length = 361
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 22/150 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+ +C +V P P + A+L ++ S S+ AN
Sbjct: 109 VKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEA---CASAASMAPANTG--- 158
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS--- 152
E LD F+ Y +L ++++L + ++ EA++ + +E +ALT S
Sbjct: 159 --CIGEDPALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRVECQFKALTVSSPIS 212
Query: 153 -LGEGTGATMSDDED-DLHMDFSLDQSASD 180
G+G +S +E+ D++ +F +D A D
Sbjct: 213 GCGDGNDRNVSSEEEVDVNNNF-IDPQAED 241
>gi|242042882|ref|XP_002459312.1| hypothetical protein SORBIDRAFT_02g002200 [Sorghum bicolor]
gi|241922689|gb|EER95833.1| hypothetical protein SORBIDRAFT_02g002200 [Sorghum bicolor]
Length = 356
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 19/144 (13%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
+A + IKA+I +HP Y LLAA++ C +V P D L + A A+ L
Sbjct: 88 SAEAEAIKAKIVAHPQYSALLAAYLDCQKVGAPPDVLERLTAMAAK----------LDAR 137
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVR-----VHAVEAVMGCREIENT 144
+ P ELD F+ Y +L ++E+L + + + VEA +
Sbjct: 138 PPGRHEPRDP----ELDQFMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDSISGGGG 193
Query: 145 LQALTGVSLGEGTGATMSDDEDDL 168
+ +SL +G + EDD+
Sbjct: 194 SSSSARLSLTDGKSEGVGSSEDDM 217
>gi|285804239|gb|ADC35600.1| class I KNOX homeobox transcription factor STM-like 2 [Prunus
persica]
Length = 383
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 102/204 (50%), Gaps = 28/204 (13%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLA++++C +V P P + A+L ++ S S+ Q ++++
Sbjct: 123 VKAKIMAHPHYHRLLASYINCQKVGAP----PEVVARLERA---CASAASIGQMMSSSSG 175
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS--- 152
S E LD F+ Y +L ++++L + + EA++ + IE+ +ALT S
Sbjct: 176 SGCLGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMIFLQRIESQFKALTLSSSSD 231
Query: 153 ---LGEGTGATMSDDED-DLHMDFSLDQSASDSHDLMG-----FGPLLPTETERSLMERV 203
G+G S +E+ D++ +F +D A D +L G + L + + + ER
Sbjct: 232 SAVCGDGLDRNGSSEEEVDVNNNF-IDPQAED-RELKGQLLRKYSGYLGSLKQEFMKERK 289
Query: 204 RQELKIELKQVMTTYI---YIYIY 224
+ +L E +Q + + Y + Y
Sbjct: 290 KGKLPKEARQQLLDWWSRHYKWPY 313
>gi|242052735|ref|XP_002455513.1| hypothetical protein SORBIDRAFT_03g012480 [Sorghum bicolor]
gi|241927488|gb|EES00633.1| hypothetical protein SORBIDRAFT_03g012480 [Sorghum bicolor]
Length = 294
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 22/181 (12%)
Query: 10 GSSSSGGGGGGGDVSGHHDQTAT--VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLP 67
G S GG V+G + + +L+KA+IASHP Y LL+A++ C +V P
Sbjct: 10 GISRVGGAASEASVAGVGGPSPSDLTELMKAQIASHPRYPSLLSAYIECRKVGAPPQVAS 69
Query: 68 LIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHV 127
L++ ++++ G+ + + ELD F+ Y VL +KE+L +
Sbjct: 70 LLE-EVSRDRERRPGAGAGEIGVD-----------PELDEFMDSYCRVLVRYKEELSRPF 117
Query: 128 RVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGF 187
EA I+ L L AT SDD M S D+ S D+
Sbjct: 118 D----EAASFLSSIQAQLSNLCSAGSSPAATATHSDD----MMGSSEDEQCSGDTDVPDI 169
Query: 188 G 188
G
Sbjct: 170 G 170
>gi|18389212|gb|AAL67665.1| invaginata [Antirrhinum majus]
Length = 351
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 19/154 (12%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+++C ++ P P + +L ++ + G N
Sbjct: 98 VKAKIMAHPYYHKLLAAYINCQKIGAP----PEVAVKLEEACASAATMG--------RNS 145
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
E LD F+ Y +L ++++L + R EA++ IE +ALT S
Sbjct: 146 VSRIGEDPALDQFMEAYCEMLSKYEQELSKPFR----EAMLFLSRIECQFKALTLSSSDS 201
Query: 156 GTGATMS---DDEDDLHMDFSLDQSASDSHDLMG 186
G M E+++ +D SL ++ +L G
Sbjct: 202 ACGEAMDRHGSSEEEIDVDNSLIDPQAEDRELKG 235
>gi|242033115|ref|XP_002463952.1| hypothetical protein SORBIDRAFT_01g009480 [Sorghum bicolor]
gi|241917806|gb|EER90950.1| hypothetical protein SORBIDRAFT_01g009480 [Sorghum bicolor]
Length = 360
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 21 GDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVL 80
G+ S ++ IKA+I SHP Y LLAA++ C +V P D + A +AQ
Sbjct: 91 GEPSSSSPYAGDLEAIKAKIISHPHYYSLLAAYLECKKVGAPPDVSARLTA-MAQ----- 144
Query: 81 RSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCRE 140
L+ L ELD F+ Y +L FKE+L + ++ EA+ R
Sbjct: 145 ----ELEARQRTALSGLGAATEPELDQFMEAYHEMLVKFKEELTRPLQ----EAMEFMRR 196
Query: 141 IENTLQALT 149
+E+ L +L+
Sbjct: 197 VESQLNSLS 205
>gi|224063413|ref|XP_002301134.1| predicted protein [Populus trichocarpa]
gi|222842860|gb|EEE80407.1| predicted protein [Populus trichocarpa]
gi|225626279|gb|ACN97189.1| KNOX transcription factor [Populus trichocarpa]
Length = 368
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 25/144 (17%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN-N 91
V+ IKA+I +HP Y L+ A++ C +V P P + A+LA + + + S Q++
Sbjct: 105 VEAIKAKIIAHPQYSNLMEAYMDCQKVGAP----PEVVARLAAAR---QEFESRQRSFIT 157
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGV 151
+ ++S P ELD F+ Y +L ++E+L + ++ EA+ R IE L +
Sbjct: 158 SRDNSKDP----ELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMICHG 209
Query: 152 SL--------GEGTGATMSDDEDD 167
L EG G++ DD+D+
Sbjct: 210 PLRIFNSDDKSEGVGSS-EDDQDN 232
>gi|55276122|gb|AAV49802.1| homeobox transcription factor KN3 [Populus trichocarpa x Populus
deltoides]
Length = 368
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 25/144 (17%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN-N 91
V+ IKA+I +HP Y L+ A++ C +V P P + A+LA + + + S Q++
Sbjct: 105 VEAIKAKIIAHPQYSNLMEAYMDCQKVGAP----PEVVARLAAAR---QEFESRQRSFIT 157
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGV 151
+ ++S P ELD F+ Y +L ++E+L + ++ EA+ R IE L +
Sbjct: 158 SRDNSKDP----ELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMICHG 209
Query: 152 SL--------GEGTGATMSDDEDD 167
L EG G++ DD+D+
Sbjct: 210 PLRIFNSDDKSEGVGSS-EDDQDN 232
>gi|356499245|ref|XP_003518452.1| PREDICTED: homeobox protein SHOOT MERISTEMLESS-like [Glycine max]
Length = 261
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 13/126 (10%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S HH+ T T ++ +I +HPL+ +LL+++++CL+V P P + A L +S+ S+
Sbjct: 57 SHHHNPTDTCS-VRDKIMAHPLFPRLLSSYLNCLKVGAP----PEVVASLEESYAKYESF 111
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIEN 143
+ + P LD F+ Y +L ++++L + + EA++ IE
Sbjct: 112 NASSGRIGGGSIGEDP----ALDQFMEAYCEMLIKYEQELTKPFK----EAMLFFSRIEC 163
Query: 144 TLQALT 149
L+AL
Sbjct: 164 QLKALA 169
>gi|110294442|gb|ABG66654.1| BREVIPEDICELLUS [Cardamine hirsuta]
Length = 396
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 22/145 (15%)
Query: 31 ATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQ-SHHVLRSYGSLQQA 89
+ V+ +KA+I +HP Y LL A++ C ++ P + + I A + H LRS S+ ++
Sbjct: 127 SDVEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPEVVDKITAARQEFEAHQLRSTPSVTES 186
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ + ELD F+ Y +L ++E+L + ++ EA+ R IE+ L L
Sbjct: 187 SRD----------PELDQFMEAYCDMLVKYREELTRPIQ----EAMEFIRRIESQLSMLC 232
Query: 150 GVSL-------GEGTGATMSDDEDD 167
+ G+ G SD+E +
Sbjct: 233 QGPIHILNNPDGKSEGMVSSDEEQE 257
>gi|242037977|ref|XP_002466383.1| hypothetical protein SORBIDRAFT_01g006790 [Sorghum bicolor]
gi|241920237|gb|EER93381.1| hypothetical protein SORBIDRAFT_01g006790 [Sorghum bicolor]
Length = 349
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 29/175 (16%)
Query: 8 VMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLP 67
V G SS G D IKA+I SHP Y LLAA++ C +V P D
Sbjct: 75 VQGEMSSPPADGDADT------------IKAKIMSHPQYSALLAAYLDCQKVGAPPDVSD 122
Query: 68 LIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHV 127
+ A A+ G+ + + P ELD F+ Y +L F+E++ + +
Sbjct: 123 RLSAMAAK-------LGAQPGPSRWREPTTRPDP--ELDQFMEAYCNMLVKFQEEMARPI 173
Query: 128 RVHAVEAVMGCREIENTLQ--ALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD 180
+ EA + +E LQ +++ S E G+ S+DE D +D A D
Sbjct: 174 Q----EATEFFKSVERQLQLGSISDSSNCEVAGS--SEDEQDASCPEDIDPCAED 222
>gi|380746847|gb|AFE48354.1| KNOTTED-like 1-3a homeodomain protein, partial [Cuscuta pentagona]
Length = 272
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 25/142 (17%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN-NNNN 94
+KA+I SHP Y LL A++ C +V P D + A+L+ + + + S Q+A
Sbjct: 9 VKAKIISHPHYSNLLEAYMECQKVGAPPD----VAARLSAAR---QDFESRQRATLLGGG 61
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLG 154
H P ELD F+ Y +L ++E+L + ++ EA+ R IE+ L L+ +
Sbjct: 62 HEKDP----ELDRFMEAYYDMLVKYREELTRPLQ----EAMEFMRRIESQLNMLSNAPVR 113
Query: 155 ---------EGTGATMSDDEDD 167
EG G++ D +++
Sbjct: 114 VFNHSDEKCEGVGSSEEDQDNN 135
>gi|57116574|gb|AAW33775.1| STM1 protein [Streptocarpus saxorum]
Length = 353
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 39/191 (20%)
Query: 17 GGGGGDVSGHH------------DQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPID 64
GGGGG HH D A +K++I +HP Y +LLAA+VSC ++ P
Sbjct: 66 GGGGGLTPEHHSNMSTGYYFMEGDGDAGGSSVKSKIIAHPHYPRLLAAYVSCQKIGAP-- 123
Query: 65 QLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQ 124
P + A+L + S G N E LD F+ Y +L ++++L
Sbjct: 124 --PEVVAKLEEVCASATSTGC-------RNERSCVGEDPALDQFMEAYCGMLTKYEQELS 174
Query: 125 QHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGAT---------MSDDEDDLHMDFSLD 175
+ + +A++ E +ALT +S +GA S++E D++ F +D
Sbjct: 175 KPFK----DAMLFFSRFECQFKALT-LSHSADSGACDEAVLEQNGSSEEEFDVNNSF-ID 228
Query: 176 QSASDSHDLMG 186
A D H+L G
Sbjct: 229 PQAED-HELKG 238
>gi|55276120|gb|AAV49801.1| homeobox transcription factor KN2 [Populus trichocarpa x Populus
deltoides]
Length = 373
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 22/150 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+ +C +V P P + A+L ++ S S+ AN
Sbjct: 121 VKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEA---CASAASIAPANTG--- 170
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS--- 152
E LD F+ Y +L ++++L + ++ EA++ + +E +ALT S
Sbjct: 171 --CIGEDPALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRVECQFKALTLSSPIS 224
Query: 153 -LGEGTGATMSDDED-DLHMDFSLDQSASD 180
G+G +S +E+ D++ +F +D A D
Sbjct: 225 GCGDGNDRNVSSEEEVDVNNNF-IDPQAED 253
>gi|26023937|gb|AAN77690.1|AF483277_1 KNOTTED1-like homeodomain protein 2, partial [Picea abies]
Length = 383
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 25/140 (17%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +H Y +L+AA++ C +V P D + +D +L+Q H + ++ +
Sbjct: 122 MKAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQKCHAQQCVATISIGADP--- 177
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLG- 154
ELD F+ Y + ++E+L + + EA+ ++IEN L ALT ++
Sbjct: 178 --------ELDQFMEAYCEMFIKYQEELTKPFK----EAMAFLKKIENQLGALTKGTIRT 225
Query: 155 --------EGTGATMSDDED 166
G GA S++ED
Sbjct: 226 SSLDQGDERGDGAASSEEED 245
>gi|42563111|ref|NP_177208.2| homeobox protein knotted-1-like 2 [Arabidopsis thaliana]
gi|21431769|sp|P46640.3|KNAT2_ARATH RecName: Full=Homeobox protein knotted-1-like 2; AltName:
Full=Protein ATK1; AltName: Full=Protein KNAT2
gi|606952|gb|AAA67882.1| knotted-like homeobox protein [Arabidopsis thaliana]
gi|332196952|gb|AEE35073.1| homeobox protein knotted-1-like 2 [Arabidopsis thaliana]
Length = 310
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 24/161 (14%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +IK++IASHPLY +LL ++ C +V P++ +++ ++H R L
Sbjct: 65 SLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSCFGA 124
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL-TG 150
+ ELD F+ Y +L +K L + EA +IE LQ L TG
Sbjct: 125 D----------PELDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCTG 170
Query: 151 VSLGEG---TGATMSDDE----DDLHMDFSLDQSASDSHDL 184
+ GA SD+E DD+ D S Q S+ DL
Sbjct: 171 PASATALSDDGAVSSDEELREDDDIAADDS--QQRSNDRDL 209
>gi|167859843|gb|ACA04875.1| KNOTTED1-like homeodomain protein 2 [Picea abies]
Length = 319
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 25/140 (17%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +H Y +L+AA++ C +V P D + +D +L+Q H QQ +
Sbjct: 138 MKAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQKCHA-------QQCVATISI 189
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLG- 154
P ELD F+ Y + ++E+L + + EA+ ++IEN L ALT ++
Sbjct: 190 GADP----ELDQFMEAYCEMFIKYQEELTKPFK----EAMAFLKKIENQLGALTKGTIRT 241
Query: 155 --------EGTGATMSDDED 166
G GA S++ED
Sbjct: 242 SSLDQGYERGDGAASSEEED 261
>gi|85543298|gb|ABC71529.1| KNOTTED1 homeodomain protein [Chasmanthium latifolium]
Length = 334
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 24/122 (19%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLR-----SYGSLQ 87
V IKA+I SHP Y LLAA++ C +V P P + A+L L ++G L
Sbjct: 81 VDAIKAKIISHPHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTAFGGLG 136
Query: 88 QANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQA 147
A ELD F+ Y +L F+E+L + ++ EA+ R +E+ L +
Sbjct: 137 NAT-----------EPELDQFMEAYHEMLVKFREELTRPLQ----EALEFMRRVESQLNS 181
Query: 148 LT 149
L+
Sbjct: 182 LS 183
>gi|984046|emb|CAA57122.1| ATK1 [Arabidopsis thaliana]
gi|984048|emb|CAA57121.1| ATK1 [Arabidopsis thaliana]
Length = 311
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 24/161 (14%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +IK++IASHPLY +LL ++ C +V P++ +++ ++H R L
Sbjct: 65 SLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPL----- 119
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL-TG 150
+ P ELD F+ Y +L +K L + EA +IE LQ L TG
Sbjct: 120 -SCFGADP----ELDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCTG 170
Query: 151 VSLGEG---TGATMSDDE----DDLHMDFSLDQSASDSHDL 184
+ GA SD+E DD+ D S Q S+ DL
Sbjct: 171 PASATALSDDGAVSSDEELREDDDIAADDS--QQRSNDRDL 209
>gi|224115894|ref|XP_002317151.1| predicted protein [Populus trichocarpa]
gi|222860216|gb|EEE97763.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 22/150 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+ +C +V P P + A+L ++ S S+ AN
Sbjct: 58 VKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEA---CASAASIAPANTG--- 107
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS--- 152
E LD F+ Y +L ++++L + ++ EA++ + +E +ALT S
Sbjct: 108 --CIGEDPALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRVECQFKALTLSSPIS 161
Query: 153 -LGEGTGATMSDDED-DLHMDFSLDQSASD 180
G+G +S +E+ D++ +F +D A D
Sbjct: 162 GCGDGNDRNVSSEEEVDVNNNF-IDPQAED 190
>gi|31745219|gb|AAP68879.1| putative knotted1-type homeobox protein [Oryza sativa Japonica
Group]
Length = 353
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KAEI SHP Y LLAA++ C +V P D L + A A + + G ++ +
Sbjct: 81 MKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPRRD 140
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
P +LD F+ Y +L ++E+L++ + + A E R + N S E
Sbjct: 141 DDVPD--HQLDQFMDAYCSMLTRYREELERPI-LEAAEFFSLIRSLVN--------SNCE 189
Query: 156 GTGATMSDDEDD 167
GTG+ S++E D
Sbjct: 190 GTGS--SEEEQD 199
>gi|118482378|gb|ABK93112.1| unknown [Populus trichocarpa]
Length = 285
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 22/150 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+ +C +V P P + A+L ++ S S+ AN
Sbjct: 33 VKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEA---CASAASIAPANTG--- 82
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS--- 152
E LD F+ Y +L ++++L + ++ EA++ + +E +ALT S
Sbjct: 83 --CIGEDPALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRVECQFKALTLSSPIS 136
Query: 153 -LGEGTGATMSDDED-DLHMDFSLDQSASD 180
G+G +S +E+ D++ +F +D A D
Sbjct: 137 GCGDGNDRNVSSEEEVDVNNNF-IDPQAED 165
>gi|224110918|ref|XP_002315682.1| predicted protein [Populus trichocarpa]
gi|222864722|gb|EEF01853.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 18/134 (13%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
LIKA+IASHP Y +LL A++ C +V P +D + R +Q +
Sbjct: 68 LIKAKIASHPCYPRLLEAYIDCQKVGAPPGIACFLD-------EIRRENDLFKQDAVSTY 120
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL-TGVSL 153
P ELD F+ Y +L +K L++ EA +IE L+ L TG S+
Sbjct: 121 WGADP----ELDEFMETYCDLLVKYKSDLERPFD----EATTFLNKIEMQLRNLCTGASI 172
Query: 154 G--EGTGATMSDDE 165
GA SD+E
Sbjct: 173 RSISDEGAPSSDEE 186
>gi|224123968|ref|XP_002330254.1| predicted protein [Populus trichocarpa]
gi|222871710|gb|EEF08841.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 25/141 (17%)
Query: 25 GHHDQTAT--VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRS 82
GH + T + IK +IA+HP Y L++AH+ C +V P + + L++A + + ++ + S
Sbjct: 53 GHREVTGSDMYDAIKTQIANHPRYPDLVSAHLECQKVGAPPEMVSLLEA-IGRGNYKINS 111
Query: 83 YGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIE 142
+ + P ELD F+ Y VL +KE+L + EA IE
Sbjct: 112 FYEI---------GADP----ELDEFMESYCEVLRRYKEELSKPFD----EAATFLSSIE 154
Query: 143 NTLQALTGVSLGEGTGATMSD 163
+ L SL +GT M D
Sbjct: 155 SQLS-----SLCKGTLTKMFD 170
>gi|8778590|gb|AAF79598.1|AC007945_18 F28C11.2 [Arabidopsis thaliana]
Length = 344
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 15/138 (10%)
Query: 26 HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGS 85
+D ++ +IKA+IA HP Y +LL A++ C +V P + L++ ++ + V +
Sbjct: 72 RNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLE-EIQRESDVYK---- 126
Query: 86 LQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTL 145
Q+ ++ P ELD F+ Y +L +K L + EA +IE L
Sbjct: 127 -QEVVPSSCFGADP----ELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQL 177
Query: 146 QAL-TGVSLGEGTGATMS 162
+ L TGV G MS
Sbjct: 178 RNLCTGVESARGVSGGMS 195
>gi|6942297|gb|AAF32398.1|AF224498_1 KNOTTED-1-like homeobox protein a [Triticum aestivum]
gi|57157673|dbj|BAD83801.1| KN1 homeobox protein [Triticum aestivum]
Length = 362
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 24/125 (19%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLI-----DAQLAQSHHVLRSYG 84
A V+ IKA+I SHP Y LLAA++ C +V P + L + D +L Q L S+G
Sbjct: 100 AADVEAIKAKIISHPHYSSLLAAYLDCQKVGAPPEVLARLTAVAQDLELRQ-RTALGSFG 158
Query: 85 SLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENT 144
+ + ELD F+ Y +L ++E+L + ++ EA+ R +E
Sbjct: 159 TATEP--------------ELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQ 200
Query: 145 LQALT 149
L +L+
Sbjct: 201 LNSLS 205
>gi|94982884|gb|ABF50222.1| knox-like protein [Solanum tuberosum]
Length = 322
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 21/98 (21%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
T LIKA+IA+HPLY LL+A++ C +V P +++ + +
Sbjct: 62 TNMSDLIKAQIANHPLYPNLLSAYLQCRKVGAPQGMTSILE----------------EIS 105
Query: 90 NNNNNHSLSPHERQ-----ELDNFLAQYLIVLCTFKEQ 122
N NN S S H + ELD F+ Y VL +KE+
Sbjct: 106 NENNLISSSCHSSEIGADPELDKFMESYCAVLVKYKEE 143
>gi|6942300|gb|AAF32399.1|AF224499_1 KNOTTED-1-like homeobox protein b [Triticum aestivum]
gi|6942302|gb|AAF32400.1|AF224500_1 KNOTTED-1-like homeobox protein d [Triticum aestivum]
gi|57157675|dbj|BAD83802.1| KN1 homeobox protein [Triticum aestivum]
gi|57157677|dbj|BAD83803.1| KN1 homeobox protein [Triticum aestivum]
Length = 363
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 22/142 (15%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLR--SYGSLQ 87
A V+ IKA+I SHP Y LLAA++ C +V P + L + A +AQ + + + GSL
Sbjct: 101 AADVEAIKAKIISHPHYSSLLAAYLDCQKVGAPPEVLARLTA-VAQDLELRQRTALGSLG 159
Query: 88 QANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQA 147
A ELD F+ Y +L ++E+L + ++ EA+ R +E L +
Sbjct: 160 TATE-----------PELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNS 204
Query: 148 L--TGVSLGE--GTGATMSDDE 165
L +G SL +G++ D E
Sbjct: 205 LSISGRSLRNILSSGSSEEDQE 226
>gi|85816364|gb|ABC84491.1| knotted-like transcription factor [Prunus persica]
gi|88853988|gb|ABD52723.1| KNOPE1 [Prunus persica]
Length = 389
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V+ IKA+I +HP Y LL A++ C RV P + + + A + RS + ++A+ +
Sbjct: 122 VEAIKAKIIAHPQYSNLLEAYMDCQRVGAPSEVVARLTAARQEFEARQRSSVASREASKD 181
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
ELD F+ Y +L ++E+L + ++ EA+ R IE L L
Sbjct: 182 ----------PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNML 223
>gi|22074785|gb|AAM47027.1| shootmeristemless-like [Petunia x hybrida]
Length = 347
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 26 HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGS 85
H D + IKA+I +HP Y +LLAA+++C ++ P + + ++ A S H+ R+ G
Sbjct: 75 HEDGNSCSSNIKAKIMAHPHYPRLLAAYINCQKIGAPPEVVARLEEVCATSAHMGRNGGG 134
Query: 86 LQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTL 145
+ E LD F+ Y +L ++++L + + EA++ IE
Sbjct: 135 GGGG-----GNNVIGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQF 185
Query: 146 QALTGVSLGEGTGA 159
+ALT S E A
Sbjct: 186 KALTLASTSESVAA 199
>gi|149389448|gb|ABR26247.1| transcription factor STM4 [Euphorbia esula]
Length = 370
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
T+T +KA+I +HP Y +LLAA+++C +V P P I A+L ++ + G
Sbjct: 111 TSTTASVKAKIMAHPHYHRLLAAYINCQKVGAP----PEIAARLEEACASAATMGP---- 162
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ L E LD F+ Y +L ++++L + + EA++ + +E+ +ALT
Sbjct: 163 --SGTSCLG--EDPALDQFMEAYCEMLTKYEQELFKPFK----EAMLFLQRVESQFKALT 214
Query: 150 GVSLGEGTGATMSD------DEDDLHMDFSLDQSASDSHDLMG 186
VS A +D +E D++ +F +D A D H+L G
Sbjct: 215 -VSSPHSACAEANDRNGSSEEEVDVNNNF-IDPQAED-HELKG 254
>gi|85543300|gb|ABC71530.1| KNOTTED1 homeodomain protein [Lithachne humilis]
Length = 350
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 14/119 (11%)
Query: 31 ATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN 90
A V+ IKA+I SHP Y LLAA++ C +V P + + A LAQ LR SL
Sbjct: 96 ADVEAIKAKIISHPHYSSLLAAYLDCQKVGAPPEVAARLTA-LAQDLE-LRQRTSLS--- 150
Query: 91 NNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
L ELD F+ Y +L ++E+L + ++ EA+ R +E+ L +L+
Sbjct: 151 -----GLGAATEPELDQFMEAYHEMLMKYREELTRPLQ----EAMEFLRRVESQLNSLS 200
>gi|300676311|gb|ADK26525.1| HERMIT/STM protein [Petunia x hybrida]
Length = 347
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 26 HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGS 85
H D + IKA+I +HP Y +LLAA+++C ++ P + + ++ A S H+ R+ G
Sbjct: 75 HEDGNSCSSNIKAKIMAHPHYPRLLAAYINCQKIGAPPEVVARLEELCATSAHMGRNGGG 134
Query: 86 LQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTL 145
+ E LD F+ Y +L ++++L + + EA++ IE
Sbjct: 135 GGGG-----GNNVIGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQF 185
Query: 146 QALTGVSLGEGTGA 159
+ALT S E A
Sbjct: 186 KALTLASTSESVAA 199
>gi|356554470|ref|XP_003545569.1| PREDICTED: homeobox protein SBH1-like isoform 2 [Glycine max]
Length = 330
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 19/160 (11%)
Query: 25 GHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYG 84
HH+ T T ++ +I +HPL+ +LL+++++CL+V P P + A L +S S+
Sbjct: 68 SHHNPTDTCS-VRDKIMAHPLFPRLLSSYLNCLKVGAP----PEVVASLEESCAKCESFN 122
Query: 85 SLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENT 144
+ ++ S E LD F+ Y +L ++++L + + EA++ IE
Sbjct: 123 A-----SSGRTGGSIGEDPALDQFMEAYCEMLIKYEQELTKPFK----EAMLFFSRIECQ 173
Query: 145 LQALTGVSLGEGTGA----TMSDDEDDLHMDFSLDQSASD 180
L+AL S A T S +E D+H + +LD A D
Sbjct: 174 LKALAVSSDFACNKASQSETSSQNEVDVHEN-NLDSQAED 212
>gi|55669501|gb|AAV54618.1| homeobox transcription factor KN1 [Pinus taeda]
Length = 434
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IK++I +HP Y LL A++ C ++ P + + +DA + R
Sbjct: 162 SAHFNVDNEEHAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREHQDPQRRT 221
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIEN 143
S+ + P ELD F+ Y +L + E+L + + EA++ ++IE
Sbjct: 222 VSI---------GMDP----ELDQFMEAYCEILTKYHEELAKPFK----EAMLFLKKIET 264
Query: 144 TLQALTGVSLGEGTGATMSDDEDD 167
SLG+GT S +DD
Sbjct: 265 QFN-----SLGKGTIRISSPADDD 283
>gi|57116570|gb|AAW33773.1| STM1 protein [Streptocarpus dunnii]
Length = 356
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 7 GVMGSSSSGGGGGGGDVSGHHDQTATVQL------------IKAEIASHPLYEQLLAAHV 54
G+ +SSS GG + H T+T +K++I +HP Y +LLAA+V
Sbjct: 59 GINRNSSSAAACGGSMMPEHQSNTSTGYYFMEGDGVAGGGSVKSKIMAHPHYPRLLAAYV 118
Query: 55 SCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLI 114
+C ++ P P + A+L ++ + G N E LD F+ Y
Sbjct: 119 NCQKIGAP----PEVVAKLEEACASTITIGG-------RNERSCVGEDPALDQFMEAYCE 167
Query: 115 VLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT----------GVSLGEGTGATMSDD 164
+L ++++L + + EA++ IE +ALT G ++ E G+ S++
Sbjct: 168 MLTKYEQELSKPFK----EAMLFLSRIECQFKALTLSHSSDSGACGEAVMERNGS--SEE 221
Query: 165 EDDLHMDFSLDQSASD 180
E D++ F +D A D
Sbjct: 222 EFDVNNSF-IDPQAED 236
>gi|11463937|dbj|BAB18582.1| CRKNOX1 [Ceratopteris richardii]
Length = 512
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 16/128 (12%)
Query: 22 DVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLR 81
D+ H +I+++I SHP Y +L+ A+V+C ++ P P + L + +
Sbjct: 199 DMENAHASADRSDVIRSKIMSHPTYPRLVMAYVNCHKIGAP----PEVATSLEEISKKYQ 254
Query: 82 SYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREI 141
S+ S A + ELDNF+ Y VL + ++L Q + EA+ R+I
Sbjct: 255 SFRSSSPAPTGAD--------PELDNFMETYCNVLQKYHDELMQPYK----EAMTFFRKI 302
Query: 142 ENTLQALT 149
E L AL+
Sbjct: 303 ELQLNALS 310
>gi|165855677|gb|ABY67934.1| shoot meristemless STM2 [Euphorbia esula]
Length = 264
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
T+T +KA+I +HP Y +LLAA+++C +V P P I A+L ++ + G
Sbjct: 6 TSTTASVKAKIMAHPHYHRLLAAYINCQKVGAP----PEIAARLEEACASAATMGP---- 57
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ L E LD F+ Y +L ++++L + + EA++ + +E+ +ALT
Sbjct: 58 --SGTSCLG--EDPALDQFMEAYCEMLTKYEQELFKPFK----EAMLFLQRVESQFKALT 109
Query: 150 GVSLGEGTGATMSD------DEDDLHMDFSLDQSASDSHDLMG 186
VS A +D +E D++ +F +D A D H+L G
Sbjct: 110 -VSSPHSACAEANDRNGSSEEEVDVNNNF-IDPQAED-HELKG 149
>gi|165855683|gb|ABY67935.1| shoot meristemless STM3 [Euphorbia esula]
Length = 297
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
T+T +KA+I +HP Y +LLAA+++C +V P P I A+L ++ + G
Sbjct: 106 TSTTASVKAKIMAHPHYHRLLAAYINCQKVGAP----PEIAARLEEACASAATMGP---- 157
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ L E LD F+ Y +L ++++L + + EA++ + +E+ +ALT
Sbjct: 158 --SGTSCLG--EDPALDQFMEAYCEMLTKYEQELFKPFK----EAMLFLQRVESQFKALT 209
Query: 150 GVSLGEGTGATMSD------DEDDLHMDFSLDQSASDSHDLMG 186
VS A +D +E D++ +F +D A D H+L G
Sbjct: 210 -VSSPHSACAEANDRNGSSEEEVDVNNNF-IDPQAED-HELKG 249
>gi|149389446|gb|ABR26246.1| transcription factor STM1 [Euphorbia esula]
Length = 376
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
T+T +KA+I +HP Y +LLAA+++C +V P P I A+L ++ + G
Sbjct: 117 TSTTASVKAKIMAHPHYHRLLAAYINCQKVGAP----PEIAARLEEACASAATMGP---- 168
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ L E LD F+ Y +L ++++L + + EA++ + +E+ +ALT
Sbjct: 169 --SGTSCLG--EDPALDQFMEAYCEMLTKYEQELFKPFK----EAMLFLQRVESHFKALT 220
Query: 150 GVSLGEGTGATMSD------DEDDLHMDFSLDQSASDSHDLMG 186
VS A +D +E D++ +F +D A D H+L G
Sbjct: 221 -VSSPHSACAEANDRNGSSEEEVDVNNNF-IDPQAED-HELKG 260
>gi|350540074|ref|NP_001234378.1| PETROSELINUM [Solanum lycopersicum]
gi|169647565|gb|ACA61779.1| PETROSELINUM [Solanum lycopersicum]
Length = 171
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQL----AQSHHVLRSYGSLQQANN 91
IK +I H LY L+ H+ CL+V I ++ ID + A+ + V+ Q N
Sbjct: 37 IKRKICCHSLYGLLVQTHLDCLKVCLGITEIDKIDQKTEEKSAKCNKVISHTMDHQTELN 96
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
N SL+ + ELDNF+ Y + L KE +++
Sbjct: 97 NKFSSLTMDQPAELDNFMEAYCVALSKLKEAMEE 130
>gi|3024086|sp|Q43484.1|KNOX3_HORVU RecName: Full=Homeobox protein KNOX3; AltName: Full=Hooded protein
gi|793847|emb|CAA58503.1| Knox3 [Hordeum vulgare]
Length = 364
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 18/140 (12%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A V+ IKA+I SHP Y LLAA++ C +V P P + A+L L L+Q
Sbjct: 102 AADVEAIKAKIISHPHYSSLLAAYLDCQKVGAP----PEVSARLTAVAQDLE----LRQR 153
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL- 148
L ELD F+ Y +L ++E+L + ++ EA+ R +E L +L
Sbjct: 154 TALGG--LGTATEPELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNSLS 207
Query: 149 -TGVSLGE--GTGATMSDDE 165
+G SL TG++ D E
Sbjct: 208 ISGRSLRNILSTGSSEEDQE 227
>gi|289655988|gb|ADD14042.1| class 1 KNOTTED-like transcription factor STM-like2 [Prunus
persica]
Length = 383
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 81/152 (53%), Gaps = 19/152 (12%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLA++++C +V P P + A+L ++ S S+ Q ++++
Sbjct: 123 VKAKIMAHPHYHRLLASYINCQKVGAP----PEVVARLEEA---CASAASIGQMMSSSSG 175
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS--- 152
S E LD F+ Y +L ++++L + + EA++ + IE+ +ALT S
Sbjct: 176 SGCLGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMIFLQRIESQFKALTLSSSSD 231
Query: 153 ---LGEGTGATMSDDED-DLHMDFSLDQSASD 180
G+G S +E+ D++ +F +D A D
Sbjct: 232 SAVCGDGLDRNGSSEEEVDVNNNF-IDPQAED 262
>gi|345649239|gb|AEO14150.1| KNAT2/6 protein [Eschscholzia californica subsp. californica]
Length = 355
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 23 VSGHHDQTATVQL---IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHV 79
VSG+ D+ V + IKA+IASHP Y LL A++ C +V P++ L+D ++
Sbjct: 91 VSGNDDEDDEVMMMSYIKAKIASHPRYPILLDAYIDCQKVGAPMEIACLLDEIRQENDTS 150
Query: 80 LRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
R+ S ++ ELDNF+ Y +L +K L +
Sbjct: 151 KRTVVSTTCLGDD----------PELDNFMETYCDILVRYKSDLSR 186
>gi|326525409|dbj|BAK07974.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 364
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 18/140 (12%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A V+ IKA+I SHP Y LLAA++ C +V P P + A+L L L+Q
Sbjct: 102 AADVEAIKAKIISHPHYSSLLAAYLDCQKVGAP----PEVSARLTAVAQDLE----LRQR 153
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL- 148
L ELD F+ Y +L ++E+L + ++ EA+ R +E L +L
Sbjct: 154 TALGG--LGTATEPELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNSLS 207
Query: 149 -TGVSLGE--GTGATMSDDE 165
+G SL TG++ D E
Sbjct: 208 ISGRSLRNILSTGSSEEDQE 227
>gi|225444460|ref|XP_002271944.1| PREDICTED: homeobox protein SBH1-like [Vitis vinifera]
Length = 361
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 22/160 (13%)
Query: 26 HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGS 85
H + + +KA+I +HP Y +LLAA+ +C +V P + + ++ A ++R+ S
Sbjct: 98 HGNNDGSTSSVKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEACASEAAMVRTGTS 157
Query: 86 LQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTL 145
E LD F+ Y +L ++++L + + EA++ +E
Sbjct: 158 CIG------------EDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRVECQF 201
Query: 146 QALTGVSL----GEGTGATMSDDED-DLHMDFSLDQSASD 180
+ALT S GEG S +E+ D++ +F +D A D
Sbjct: 202 KALTVSSSDSAGGEGLDRNGSSEEEVDVNNNF-IDPQAED 240
>gi|86611375|gb|ABD14371.1| homeodomain protein Kn1 [Prunus dulcis]
Length = 384
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 81/152 (53%), Gaps = 19/152 (12%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLA++++C +V P P + A+L ++ S S+ Q ++++
Sbjct: 124 VKAKIMAHPHYHRLLASYINCQKVGAP----PEVVARLEEA---CASAASIGQMMSSSSG 176
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS--- 152
S E LD F+ Y +L ++++L + + EA++ + IE+ +ALT S
Sbjct: 177 SGCLGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMIFLQRIESQFKALTLSSSSD 232
Query: 153 ---LGEGTGATMSDDED-DLHMDFSLDQSASD 180
G+G S +E+ D++ +F +D A D
Sbjct: 233 SAVCGDGLDRNGSSEEEVDVNNNF-IDPQAED 263
>gi|356535016|ref|XP_003536045.1| PREDICTED: homeobox protein knotted-1-like 1-like isoform 2
[Glycine max]
Length = 293
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 30/145 (20%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSH--HVLRSYGSLQQANN 91
+ IK++IA+HPLY L++A++ C +V P + L++ +S+ LR G
Sbjct: 49 RFIKSQIATHPLYPNLVSAYIECRKVGAPPELASLLEEIARESYPTDALREIG------- 101
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGV 151
+ ELD F+ Y VL +K++L + EA + IE+ L L
Sbjct: 102 ---------DDPELDEFMESYCEVLHRYKQELSKPFN----EATLFLCSIESQLSNLCKG 148
Query: 152 SLGEGTGATMSDD-----EDDLHMD 171
+L T A +SD+ ED+L +
Sbjct: 149 TL---TIAFLSDEAAGTSEDELSWE 170
>gi|4589882|dbj|BAA76904.1| homeobox 20 [Nicotiana tabacum]
Length = 356
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 17/145 (11%)
Query: 23 VSGHHDQTAT---VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHV 79
V HH+ ++ V +KA+I +HP LL A++ C +V P P + A+L+
Sbjct: 89 VQNHHESESSGSEVDALKAKIIAHPQCSNLLDAYMDCQKVGAP----PEVVARLS----A 140
Query: 80 LRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCR 139
+R ++Q +++ + +S + ELD F+ Y +L ++E+L + + EA+ R
Sbjct: 141 VRQEFEVRQRDSSTDRDVS--KDPELDQFMEAYYDMLVKYREELTRPLH----EAMDFMR 194
Query: 140 EIENTLQALTGVSLGEGTGATMSDD 164
+IE L L G G+ D+
Sbjct: 195 KIETQLNMLEDKCEGVGSSEEEQDN 219
>gi|31323453|gb|AAP47028.1|AF375969_1 knox-like homeodomain protein 1 [Solanum lycopersicum]
Length = 168
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQL----AQSHHVLRSYGSLQQANN 91
IK +I H LY L+ H+ CL+V I ++ ID + A+ + V+ Q N
Sbjct: 34 IKRKICCHSLYGLLVQTHLDCLKVCLGITEIDKIDQKTEEKSAKCNKVISHTMDHQTELN 93
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
N SL+ + ELDNF+ Y + L KE +++
Sbjct: 94 NKFSSLTMDQPAELDNFMEAYCVALSKLKEAMEE 127
>gi|195642508|gb|ACG40722.1| homeobox protein OSH1 [Zea mays]
Length = 359
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 38/172 (22%)
Query: 2 QEPSLG-------VMGSSSSGGGG--------GGG---------DVSGHHDQTATVQLIK 37
Q PS G V + +SGG G GGG + S V+ IK
Sbjct: 46 QPPSAGLPLTLNTVAATGNSGGSGNPVLQLANGGGLLDACVKAKEPSSSSPYAGDVEAIK 105
Query: 38 AEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSL 97
A+I SHP Y LL A++ C +V P P + A+L + + + + Q+ L
Sbjct: 106 AKIISHPHYYSLLTAYLECNKVGAP----PEVSARLTE---IAQEVEARQRTALGG---L 155
Query: 98 SPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ ELD F+ Y +L F+E+L + ++ EA+ R +E+ L +L+
Sbjct: 156 AAATEPELDQFMEAYHEILVKFREELTRPLQ----EAMEFMRRVESQLNSLS 203
>gi|11463941|dbj|BAB18584.1| CRKNOX2 [Ceratopteris richardii]
Length = 430
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 17/134 (12%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
LI+ +I SHP Y +L+ A+V+C ++ P D LI ++++ + +RS S +
Sbjct: 130 LIRTKIVSHPSYPRLVMAYVNCYKIGAPEDAA-LILEEVSRKYQEIRSSSSEVIGAD--- 185
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLG 154
ELDNF+ Y VL + E+L + EA+ ++IE L A++ SL
Sbjct: 186 --------PELDNFMELYCNVLQRYHEELTHPYK----EAMAFFKKIELQLDAISKGSLS 233
Query: 155 -EGTGATMSDDEDD 167
+G T ++ D
Sbjct: 234 LSQSGETKTEANSD 247
>gi|356497567|ref|XP_003517631.1| PREDICTED: homeobox protein knotted-1-like 6-like [Glycine max]
Length = 309
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 28 DQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQ 87
D AT ++KA+IASHP Y +LL A++ C +V P + L++ ++ + + + +S
Sbjct: 60 DDVATTTVMKAKIASHPQYSRLLQAYIDCQKVGAPPEIARLLE-EIRRENDLCKS----D 114
Query: 88 QANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQA 147
+++ P ELD F+ Y +L +K L + EA +IE L
Sbjct: 115 VVSSSTCFGADP----ELDEFMETYCDMLVKYKSDLARPFE----EATTFLNKIEMQLSH 166
Query: 148 LTGVSLGEGTGATMSDDEDD 167
L TGA++S+ DD
Sbjct: 167 LC-------TGASVSNVSDD 179
>gi|255554765|ref|XP_002518420.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223542265|gb|EEF43807.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 353
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 22/158 (13%)
Query: 28 DQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQ 87
+ A +KA+I +HP Y +LLAA+++C +V P + + ++ A S ++
Sbjct: 93 NNDAAAASVKAKIMAHPHYHRLLAAYINCQKVGAPPEVVTRLEEACA-------SAATMG 145
Query: 88 QANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQA 147
QA + E LD F+ Y +L ++++L + + EA++ + +E +A
Sbjct: 146 QAGTS-----CIGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLQRVECQFKA 196
Query: 148 LTGVS----LGEGTGATMSDDED-DLHMDFSLDQSASD 180
LT S LGE + S +E+ D++ +F +D A D
Sbjct: 197 LTVASPNSALGEASDRNGSSEEEVDVNNNF-IDPQAED 233
>gi|42570557|ref|NP_850951.2| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
gi|75146711|sp|Q84JS6.1|KNAT6_ARATH RecName: Full=Homeobox protein knotted-1-like 6; AltName:
Full=Protein KNAT6
gi|27754596|gb|AAO22744.1| putative homeodomain transcription factor KNAT6 [Arabidopsis
thaliana]
gi|28393913|gb|AAO42364.1| putative homeodomain transcription factor KNAT6 [Arabidopsis
thaliana]
gi|332192260|gb|AEE30381.1| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
Length = 327
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 18/144 (12%)
Query: 26 HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGS 85
+D ++ +IKA+IA HP Y +LL A++ C +V P + L++ ++ + V +
Sbjct: 75 RNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLE-EIQRESDVYK---- 129
Query: 86 LQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTL 145
Q+ ++ P ELD F+ Y +L +K L + EA +IE L
Sbjct: 130 -QEVVPSSCFGADP----ELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQL 180
Query: 146 QAL-TGVSLGEGT---GATMSDDE 165
+ L TGV G G SD+E
Sbjct: 181 RNLCTGVESARGVSEDGVISSDEE 204
>gi|345649241|gb|AEO14151.1| STM1 protein [Eschscholzia californica subsp. californica]
Length = 362
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
I+A+I +HP Y +LLA++V+C +V P P + A+L +++ G +
Sbjct: 110 IRAKIMAHPYYTRLLASYVNCQKVGAP----PEVVAKLEEANAT----GEAMARTGSGTG 161
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL-- 153
+ E LD F+ Y +L ++++L + EA+M IE +ALT
Sbjct: 162 CIG--EDPALDQFMEAYCEMLTKYQQELTKPFE----EAMMFLSRIECQFKALTVSDSVG 215
Query: 154 GEGTGATMSDDEDDLHMDFSLDQSASD 180
GE S DED D +D A D
Sbjct: 216 GEAVNRNGSSDEDIDANDNYIDPQAED 242
>gi|188531742|gb|ACD62901.1| STM-like protein [Ipomoea nil]
Length = 326
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+++C ++ P + + ++ A + R+ GS
Sbjct: 73 VKAKIMAHPHYHRLLAAYLNCQKIGAPPEVVARLEEACASMAAMGRTGGSCL-------- 124
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
E LD F+ Y +L ++++L + + EA++ IE+ +ALT E
Sbjct: 125 ----GEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRIESQFKALTLPCSSE 176
Query: 156 GTGATMSD 163
GA D
Sbjct: 177 SAGADAMD 184
>gi|9295701|gb|AAF87007.1|AC005292_16 F26F24.25 [Arabidopsis thaliana]
gi|15991300|dbj|BAB69678.1| homeodomain transcription factor KNAT6 [Arabidopsis thaliana]
Length = 324
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 18/144 (12%)
Query: 26 HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGS 85
+D ++ +IKA+IA HP Y +LL A++ C +V P + L++ ++ + V +
Sbjct: 72 RNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLE-EIQRESDVYK---- 126
Query: 86 LQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTL 145
Q+ ++ P ELD F+ Y +L +K L + EA +IE L
Sbjct: 127 -QEVVPSSCFGADP----ELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQL 177
Query: 146 QAL-TGVSLGEGT---GATMSDDE 165
+ L TGV G G SD+E
Sbjct: 178 RNLCTGVESARGVSEDGVISSDEE 201
>gi|162463933|ref|NP_001105084.1| liguleless4 [Zea mays]
gi|30348863|gb|AAP31409.1|AF457118_1 knotted1-like homeodomain protein liguleless4a [Zea mays]
gi|195607142|gb|ACG25401.1| homeotic protein knotted-1 [Zea mays]
gi|238009140|gb|ACR35605.1| unknown [Zea mays]
gi|408690288|gb|AFU81604.1| HB-type transcription factor, partial [Zea mays subsp. mays]
gi|413950086|gb|AFW82735.1| liguleless4 [Zea mays]
Length = 307
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 23/132 (17%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IA HP Y LL+A++ C +V P + L++ ++ + S G
Sbjct: 50 TELVKAQIAGHPRYPSLLSAYIECRKVGAPPEVATLLE-EIGRERCAAASAG-------- 100
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
L P ELD F+ Y VL +KE+L + EA + L +L G +
Sbjct: 101 GEVGLDP----ELDEFMEAYCRVLERYKEELSRPFD----EAASFLSSVRTQLSSLCGAA 152
Query: 153 LGEGTGATMSDD 164
A++SD+
Sbjct: 153 ------ASLSDE 158
>gi|357441887|ref|XP_003591221.1| Homeobox transcription factor KN2 [Medicago truncatula]
gi|355480269|gb|AES61472.1| Homeobox transcription factor KN2 [Medicago truncatula]
Length = 268
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 33/159 (20%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSH--HVLRSYGSLQQA 89
T ++IK +IA+HPLY LL+A + C +V P + L++ +SH + R G
Sbjct: 15 TDRIIKNQIATHPLYPNLLSAFLECQKVGAPTELASLLEEIGRESHPNNAFREIG----- 69
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ +LD+F+ Y VL +KE+L + + EA + IE+ L L
Sbjct: 70 -----------DDPDLDHFMESYCEVLHRYKEELSKPLN----EATLFLCNIESQLNELC 114
Query: 150 GVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFG 188
+GT TMS D + S ++A S D M G
Sbjct: 115 -----KGT-QTMSSD-----YNRSDHEAAGTSEDEMSCG 142
>gi|358249166|ref|NP_001239748.1| uncharacterized protein LOC100803095 [Glycine max]
gi|255639822|gb|ACU20204.1| unknown [Glycine max]
Length = 311
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
++IK +IA+HPLY LL+A++ C +V P + L++ +SH +
Sbjct: 57 RIIKIQIANHPLYPDLLSAYIECQKVGAPPELACLLEEIGRESHRM-------------- 102
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
N E ELD+F+ + VL +KE+L + EA + ++E+ L L +L
Sbjct: 103 NARREIGEGPELDHFMETFCQVLHRYKEELSRPFN----EATLFLGDMESQLSNLCNETL 158
Query: 154 GEGTGATMSDDE 165
+ + DE
Sbjct: 159 TKSSDNNNRSDE 170
>gi|225456981|ref|XP_002282076.1| PREDICTED: homeobox protein knotted-1-like 6 [Vitis vinifera]
gi|297733756|emb|CBI15003.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 85/209 (40%), Gaps = 53/209 (25%)
Query: 16 GGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLID----- 70
GGG G +VS I+A+IA+HPLY +LL A++ C +V P + L++
Sbjct: 69 GGGSGEEVSS---------AIRAKIATHPLYPKLLHAYIECQKVGAPPEVAYLLEEIRRG 119
Query: 71 AQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVH 130
++L + + V G+ ELD F+ Y +L +K L +
Sbjct: 120 SELCRRNAVSTCLGA----------------DPELDEFMETYCDILVKYKSDLARPFD-- 161
Query: 131 AVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPL 190
EA IE L L GA+ S + D++A S + + G +
Sbjct: 162 --EATAFLNNIETQLNTLC-------NGASRS---------YVSDEAAGSSEEDLSGGEV 203
Query: 191 LPTETERSLMERVRQELKIELKQVMTTYI 219
E + L QELK +L + + YI
Sbjct: 204 ---EVQECLQTTENQELKDKLLRKYSGYI 229
>gi|350537947|ref|NP_001233807.1| homeotic protein knotted-1 [Solanum lycopersicum]
gi|3023974|sp|Q41330.1|KN1_SOLLC RecName: Full=Homeotic protein knotted-1; Short=TKN1
gi|1256575|gb|AAC49251.1| Knotted 1 (TKn1) [Solanum lycopersicum]
gi|1588258|prf||2208273A Knotted-1 gene
Length = 355
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 31/164 (18%)
Query: 11 SSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLID 70
+ +SGGG G G+V ++ +KA+I +HP LL A++ C +V P P +
Sbjct: 78 TETSGGGAGAGEV---------IEALKAKIIAHPQCSNLLDAYMDCQKVGAP----PEVA 124
Query: 71 AQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVH 130
A+L+ +R +Q + + +S + ELD F+ Y +L ++E+L + ++
Sbjct: 125 ARLS----AVRQEFEARQRRSLTDRDVS--KDPELDQFMEAYYDMLVKYREELTRPLQ-- 176
Query: 131 AVEAVMGCREIENTLQALTGVSLG--------EGTGATMSDDED 166
EA+ ++IE L L + EG G++ D ++
Sbjct: 177 --EAMEFMQKIEAQLNMLGNAPVRIFNSEDKCEGVGSSEEDQDN 218
>gi|89953338|gb|ABD83277.1| Fgenesh protein 18 [Beta vulgaris]
Length = 207
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 15/134 (11%)
Query: 28 DQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQ 87
D T+T IKA+IASHP Y +LL A++ C +V P + +++ ++ R +GSL+
Sbjct: 71 DNTSTS--IKAKIASHPHYPRLLQAYIDCHKVGAPPEIANILEEIKQENDMYRRDFGSLR 128
Query: 88 QANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQA 147
+ ELD F+ Y +L +K L + EA +IE L+
Sbjct: 129 TCLGTD---------PELDEFMETYCEILDKYKSDLSRPFD----EATNFLNKIETQLRN 175
Query: 148 LTGVSLGEGTGATM 161
L + + A +
Sbjct: 176 LCKGAFVKTASAAL 189
>gi|57116572|gb|AAW33774.1| STM1 protein [Streptocarpus rexii]
Length = 358
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 40/196 (20%)
Query: 7 GVMGSSSSGGGGGGGDVSGHHDQTATVQL------------IKAEIASHPLYEQLLAAHV 54
G+ +SSS GG + H T+T +K++I +HP Y +LLAA+V
Sbjct: 61 GINRNSSSAAACGGSMMPEHQSNTSTGYYFMEGDGDAGGGSVKSKIMAHPHYPRLLAAYV 120
Query: 55 SCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLI 114
+C ++ P P + A+L ++ + G N E LD F+ Y
Sbjct: 121 NCQKIGAP----PEVVAKLEEACASTITIGG-------RNERSCVGEDPALDQFMEAYCE 169
Query: 115 VLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT----------GVSLGEGTGATMSDD 164
+L ++++L + + EA++ IE +ALT G ++ E G+ S++
Sbjct: 170 MLTKYEQELSKPFK----EAMLFLSRIECQFKALTLSHSSDSGACGEAVLERNGS--SEE 223
Query: 165 EDDLHMDFSLDQSASD 180
E D++ F +D A D
Sbjct: 224 EFDVNNSF-IDPQAED 238
>gi|380746841|gb|AFE48351.1| KNOTTED-like 1-1 homeodomain protein [Cuscuta pentagona]
Length = 390
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 16/133 (12%)
Query: 22 DVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLR 81
D +G + V +KA+I SHP Y LL A + C +V P + + + ++ R
Sbjct: 91 DAAGAGNSLGEVDPVKAKIVSHPHYFNLLEAFIDCQKVGAPPEVVARLTTARQEAEGKQR 150
Query: 82 -SYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCRE 140
S+GS+ + S P ELD F+ Y L +E+L++ EA+ R
Sbjct: 151 ASFGSI-------DFSKDP----ELDQFMGAYCETLVKCREELERPF----AEAMEFMRR 195
Query: 141 IENTLQALTGVSL 153
IE+ L L L
Sbjct: 196 IESQLNLLCDAPL 208
>gi|302142140|emb|CBI19343.3| unnamed protein product [Vitis vinifera]
Length = 341
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 24/145 (16%)
Query: 31 ATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN 90
+ V+ IKA+I +HP Y LL A++ C +V P P + +LA V + + S Q+++
Sbjct: 76 SEVEAIKAKIIAHPQYSNLLEAYMDCQKVGAP----PEVVERLAA---VRQEFESRQRSS 128
Query: 91 -NNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL- 148
+ S P ELD F+ Y +L ++E+L + ++ EA R IE+ L L
Sbjct: 129 VTCRDASKDP----ELDQFMEAYYDMLVKYREELTRPLQ----EATDFMRRIESQLNMLS 180
Query: 149 -------TGVSLGEGTGATMSDDED 166
T EG G++ D ++
Sbjct: 181 NGPVRIFTSDEKCEGVGSSEEDQDN 205
>gi|225458942|ref|XP_002285521.1| PREDICTED: homeobox protein knotted-1-like 2 [Vitis vinifera]
Length = 370
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 24/145 (16%)
Query: 31 ATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN 90
+ V+ IKA+I +HP Y LL A++ C +V P P + +LA V + + S Q+++
Sbjct: 105 SEVEAIKAKIIAHPQYSNLLEAYMDCQKVGAP----PEVVERLAA---VRQEFESRQRSS 157
Query: 91 -NNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL- 148
+ S P ELD F+ Y +L ++E+L + ++ EA R IE+ L L
Sbjct: 158 VTCRDASKDP----ELDQFMEAYYDMLVKYREELTRPLQ----EATDFMRRIESQLNMLS 209
Query: 149 -------TGVSLGEGTGATMSDDED 166
T EG G++ D ++
Sbjct: 210 NGPVRIFTSDEKCEGVGSSEEDQDN 234
>gi|300174946|dbj|BAJ10708.1| shoot meristemless ortholog [Cladopus doianus]
Length = 352
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 31/185 (16%)
Query: 6 LGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQ 65
+ V +++S G G + H+ T IKA+I SHP Y +LL A+V+C ++ P
Sbjct: 69 MNVNATANSTGAGCFFVENNVHEGINTTCSIKAKIMSHPHYNRLLLAYVNCQKIGAP--- 125
Query: 66 LPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHER-----QELDNFLAQYLIVLCTFK 120
P + A+ L++A +L P + LD F+ Y +L ++
Sbjct: 126 -PEVVAR-------------LEEARVAAAAALGPSDSCLGQDPALDQFMEAYCEMLTKYE 171
Query: 121 EQLQQHVRVHAVEAVMGCREIENTLQALTGVSL-----GEGTGATMSDDEDDLHMDFSLD 175
++L + ++ EA++ + +E +ALT S GE S DE+ + +D
Sbjct: 172 QELSKPLK----EAMVFLQRVEYQFKALTVSSPNSGYSGEANERNASSDEEGDGNNVFID 227
Query: 176 QSASD 180
A D
Sbjct: 228 PQAED 232
>gi|162458085|ref|NP_001105436.1| homeotic protein knotted-1 [Zea mays]
gi|123183|sp|P24345.1|KN1_MAIZE RecName: Full=Homeotic protein knotted-1
gi|22351|emb|CAA43605.1| Kn1 [Zea mays]
gi|30267712|gb|AAP21616.1| KNOTTED1 [Zea mays]
gi|32351475|gb|AAP76321.1| homeobox transcription factor KNOTTED1 [Zea mays]
gi|195624480|gb|ACG34070.1| homeobox protein OSH1 [Zea mays]
gi|414872576|tpg|DAA51133.1| TPA: knotted1 [Zea mays]
gi|227607|prf||1707304A Knotted-1 gene
Length = 359
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 38/172 (22%)
Query: 2 QEPSLG-------VMGSSSSGGGG--------GGG---------DVSGHHDQTATVQLIK 37
Q PS G V + +SGG G GGG + S V+ IK
Sbjct: 46 QPPSAGLPLTLNTVAATGNSGGSGNPVLQLANGGGLLDACVKAKEPSSSSPYAGDVEAIK 105
Query: 38 AEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSL 97
A+I SHP Y LL A++ C +V P P + A+L + + + + Q+ L
Sbjct: 106 AKIISHPHYYSLLTAYLECNKVGAP----PEVSARLTE---IAQEVEARQRTALGG---L 155
Query: 98 SPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ ELD F+ Y +L F+E+L + ++ EA+ R +E+ L +L+
Sbjct: 156 AAATEPELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLS 203
>gi|194690304|gb|ACF79236.1| unknown [Zea mays]
Length = 359
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 38/172 (22%)
Query: 2 QEPSLG-------VMGSSSSGGGG--------GGG---------DVSGHHDQTATVQLIK 37
Q PS G V + +SGG G GGG + S V+ IK
Sbjct: 46 QPPSAGLPLTLNTVAATGNSGGSGNPVLQLANGGGLLDACVKAKEPSSSSPYAGDVEAIK 105
Query: 38 AEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSL 97
A+I SHP Y LL A++ C +V P P + A+L + + + + Q+ L
Sbjct: 106 AKIISHPHYYSLLTAYLECNKVGAP----PEVSARLTE---IAQEVEARQRTALGG---L 155
Query: 98 SPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ ELD F+ Y +L F+E+L + ++ EA+ R +E+ L +L+
Sbjct: 156 AAATEPELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLS 203
>gi|326910891|gb|AEA11233.1| knotted-like homebox protein [Elaeis guineensis]
Length = 318
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
LIKA+IA+HP Y L+AA++ C +V P + L++ ++ + + G +
Sbjct: 59 LIKAQIANHPRYPSLVAAYIECRKVGAPPEMASLLE-EIGRERYTSAGCGEI-------- 109
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
P ELD F+ Y VL +KE+L +
Sbjct: 110 -GADP----ELDEFMESYCRVLQRYKEELSK 135
>gi|85543302|gb|ABC71531.1| KNOTTED1-like homeodomain protein [Leersia virginica]
Length = 360
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 14/118 (11%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
V+ IKA+I SHP Y LLAA++ C +V P P + A+LA L L+Q
Sbjct: 106 NVEAIKAKIISHPHYSSLLAAYLDCQKVGAP----PEVAARLAAVAQDLE----LRQRTA 157
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
L ELD F+ Y +L ++E+L + ++ EA+ R +E L L+
Sbjct: 158 LGG--LGAATEPELDQFMEAYQEMLVKYREELTRPLQ----EAMEFLRRVETQLNTLS 209
>gi|413950087|gb|AFW82736.1| liguleless4 [Zea mays]
Length = 277
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IA HP Y LL+A++ C +V P + L++ ++ + S G
Sbjct: 50 TELVKAQIAGHPRYPSLLSAYIECRKVGAPPEVATLLE-EIGRERCAAASAG-------- 100
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
L P ELD F+ Y VL +KE+L +
Sbjct: 101 GEVGLDP----ELDEFMEAYCRVLERYKEELSR 129
>gi|224133590|ref|XP_002321612.1| predicted protein [Populus trichocarpa]
gi|222868608|gb|EEF05739.1| predicted protein [Populus trichocarpa]
Length = 275
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 20 GGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHV 79
G + + ++ Q I+A+IASHPLY +LL A++ C +V P + L+D
Sbjct: 24 GDNSNSNNSQEEASCAIRAKIASHPLYPKLLEAYIDCQKVGAPPEMAYLLDE-------- 75
Query: 80 LRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
+R + + ++N S + ELD F+ Y +L +K L +
Sbjct: 76 IREENDVSKRSDNTVASCLGAD-PELDEFMETYCDILMKYKADLSR 120
>gi|414872575|tpg|DAA51132.1| TPA: knotted1 [Zea mays]
Length = 343
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 38/172 (22%)
Query: 2 QEPSLG-------VMGSSSSGGGG--------GGG---------DVSGHHDQTATVQLIK 37
Q PS G V + +SGG G GGG + S V+ IK
Sbjct: 30 QPPSAGLPLTLNTVAATGNSGGSGNPVLQLANGGGLLDACVKAKEPSSSSPYAGDVEAIK 89
Query: 38 AEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSL 97
A+I SHP Y LL A++ C +V P P + A+L + + + + Q+ L
Sbjct: 90 AKIISHPHYYSLLTAYLECNKVGAP----PEVSARLTE---IAQEVEARQRTALGG---L 139
Query: 98 SPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ ELD F+ Y +L F+E+L + ++ EA+ R +E+ L +L+
Sbjct: 140 AAATEPELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLS 187
>gi|449454010|ref|XP_004144749.1| PREDICTED: homeobox protein knotted-1-like 1-like [Cucumis sativus]
gi|449490809|ref|XP_004158713.1| PREDICTED: homeobox protein knotted-1-like 1-like [Cucumis sativus]
Length = 321
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 23/129 (17%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+IK +I +HPLY +L++A++ C +V P L++ ++ + +H RS
Sbjct: 59 MIKTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLE-EIGRENHPSRS------------ 105
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLG 154
S+ +LDNF+ Y VL +K +L + EA M IE L +L
Sbjct: 106 -SIELGADPQLDNFMESYCEVLHQYKNELSKPFD----EATMFLTNIELELS-----NLC 155
Query: 155 EGTGATMSD 163
+G+ MSD
Sbjct: 156 KGSFTMMSD 164
>gi|147798326|emb|CAN74528.1| hypothetical protein VITISV_031345 [Vitis vinifera]
Length = 214
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 25/143 (17%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+ +C +V P + + ++ A ++R+ S
Sbjct: 92 VKAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEACASEAAMVRTGTSCIG------- 144
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
E LD F+ Y +L ++++L + + EA++ +E +ALT
Sbjct: 145 -----EDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRVECQFKALT------ 189
Query: 156 GTGATMSDDEDDLHMDFSLDQSA 178
+ SD DDL + S SA
Sbjct: 190 ---VSSSDSGDDLALSISFVPSA 209
>gi|356567652|ref|XP_003552031.1| PREDICTED: homeobox protein knotted-1-like 6-like isoform 1
[Glycine max]
Length = 320
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 25/153 (16%)
Query: 22 DVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLR 81
++ HHD ++ LIKA+IASHP Y +LL A++ C +V P + L++ +R
Sbjct: 73 EIQRHHDASS---LIKAKIASHPHYPRLLQAYIECQKVGAPPELTCLLEE--------IR 121
Query: 82 SYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREI 141
++Q + + + ELD F+ Y +L +K L + EA +I
Sbjct: 122 RENDVRQRDVVVSTCVGAD--PELDEFMETYCDMLVKYKSDLTRPFD----EATTFLNKI 175
Query: 142 ENTLQALT--------GVSLGEGTGATMSDDED 166
E L L GVS EG A D +D
Sbjct: 176 ETQLTDLCSRGVSNDGGVSSEEGFSAGDGDPQD 208
>gi|356504010|ref|XP_003520792.1| PREDICTED: homeobox protein knotted-1-like 1-like [Glycine max]
Length = 307
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
++IK +IA+HPLY LL+A++ C +V P + L++ +SH +
Sbjct: 60 RMIKIQIANHPLYPDLLSAYIECQKVGAPPELACLLEEIGRESHRM-------------- 105
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
N E ELD+F+ + VL +KE+L + EA + ++E+ L L +L
Sbjct: 106 NARREIVEGPELDHFMETFCEVLHRYKEELSRPFN----EATLFLGDMESQLSNLCNGTL 161
Query: 154 GEGTGATMSDDE 165
+ + DE
Sbjct: 162 TKSSDNNNRSDE 173
>gi|388556558|ref|NP_001253999.1| homeobox protein knotted-1-like 2-like [Glycine max]
gi|302135385|gb|ADK94035.1| KNOX-like DNA-binding protein [Glycine max]
Length = 385
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 31/149 (20%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLR-----SYG 84
T V+ IKA+I +HP Y +L A++ C ++ P P + A++A + S G
Sbjct: 120 TGEVEAIKAKIIAHPQYSNVLEAYMDCQKIGAP----PEVVARMAAAKQEFEARQRSSVG 175
Query: 85 SLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENT 144
S + + + ELD F+ Y +L ++E+L + ++ EA+ R IE
Sbjct: 176 SRETSKD-----------PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQ 220
Query: 145 LQALTGVSLG-------EGTGATMSDDED 166
L L + EG G++ D ++
Sbjct: 221 LNMLCNGPVRIFSDDKCEGAGSSEEDQDN 249
>gi|3462614|gb|AAC33009.1| knotted I class homeodomain protein [Pisum sativum]
Length = 251
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 21/138 (15%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IKA+I +HP Y LL A++ C ++ P P A++ ++ + + + Q+++ N+
Sbjct: 116 IKAKIIAHPQYSSLLQAYMDCQKIGAP----PEAVARMVEAR---QEFEARQRSSVNSRE 168
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL-- 153
S + ELD F+ Y +L ++E+L + ++ EA+ R IE L L L
Sbjct: 169 S---SKDPELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLCNGPLRI 221
Query: 154 -----GEGTGATMSDDED 166
EG G++ + E+
Sbjct: 222 FPDDKNEGVGSSEEEQEN 239
>gi|356535014|ref|XP_003536044.1| PREDICTED: homeobox protein knotted-1-like 1-like isoform 1
[Glycine max]
Length = 296
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSH--HVLRSYGSLQQANN 91
+ IK++IA+HPLY L++A++ C +V P + L++ +S+ LR G
Sbjct: 49 RFIKSQIATHPLYPNLVSAYIECRKVGAPPELASLLEEIARESYPTDALREIG------- 101
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGV 151
+ ELD F+ Y VL +K++L + EA + IE+ L L
Sbjct: 102 ---------DDPELDEFMESYCEVLHRYKQELSKPFN----EATLFLCSIESQLSNLCKG 148
Query: 152 SL 153
+L
Sbjct: 149 TL 150
>gi|449453537|ref|XP_004144513.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
Length = 350
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA+I +HPL+ +LL A+V+C +V P P + A+L Q+ V + GS + A + N+ +
Sbjct: 99 KAKIMAHPLFPRLLTAYVNCQKVGAP----PEVVARLEQACAV--ATGSCRAAGHGNDPA 152
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLG-E 155
LD F+ Y +L ++++L + + EA++ IE+ L+A S G E
Sbjct: 153 --------LDQFMEAYCEMLTKYEQELTKPFK----EAMLFFSRIESQLKAEAVSSDGFE 200
Query: 156 GTGATMSDDEDDLHMDFSLDQSASDSHDLMG 186
G E ++ M+ + ++ +L G
Sbjct: 201 LVGQNECSKEIEVDMNENYIDPQAEVKELKG 231
>gi|85543292|gb|ABC71526.1| KNOTTED1 homeodomain protein [Panicum miliaceum]
Length = 334
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V IKA+I SHP Y LLAA++ C +V P P + A+L L+
Sbjct: 93 VGAIKAKIISHPHYHSLLAAYLECQKVGAP----PEVSARLTAMAQ------ELEARQRT 142
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
L ELD F+ Y +L F+E+L + ++ EA+ R +E+ L +L+
Sbjct: 143 ALGGLGAATEPELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 195
>gi|85543296|gb|ABC71528.1| KNOTTED1 homeodomain protein [Setaria italica]
Length = 344
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V I+A+I SHP Y LLAA++ C +V P P + A+L L+
Sbjct: 91 VDAIRAKIISHPHYYSLLAAYLECQKVGAP----PEVSARLTAMAQ------ELEARQRT 140
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
L ELD F+ Y +L F+E+L + ++ EA+ R +E+ L +L+
Sbjct: 141 ALGGLGAATEPELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLS 193
>gi|357131920|ref|XP_003567581.1| PREDICTED: homeobox protein knotted-1-like 1-like [Brachypodium
distachyon]
Length = 290
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 18/118 (15%)
Query: 10 GSSSSGGGG--GGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLP 67
G S GG G V G + +L+KA+IASHP Y LL+A++ C +V P +
Sbjct: 10 GISRVGGAASEASGVVLGGPSPSDLTELMKAQIASHPRYPTLLSAYIECRKVGAPPEVAS 69
Query: 68 LIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
L L G ++A + P ELD F+ Y VL +KE+L +
Sbjct: 70 L-----------LEEIGRERRAGAGAI-GVDP----ELDEFMESYCRVLVRYKEELSR 111
>gi|255636180|gb|ACU18432.1| unknown [Glycine max]
Length = 196
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 23/143 (16%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
+ IK +IA+HPLY L++A++ C +V P + L++ +SH +L++ N+
Sbjct: 60 RFIKTQIATHPLYPNLVSAYIECRKVGAPPELASLLEEIARESHPT----DALREIGND- 114
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
ELD F+ Y VL +K+ L + EA + IE+ L L +L
Sbjct: 115 ---------PELDEFMESYCEVLHRYKQGLSKPFN----EATLFLCSIESQLSNLCKGTL 161
Query: 154 GEGTGATMSDD-----EDDLHMD 171
SD+ ED+L +
Sbjct: 162 TMPLNNNRSDEAAGISEDELSWE 184
>gi|160420030|dbj|BAF93478.1| class-I knotted1-like homeobox protein IBKN1 [Ipomoea batatas]
Length = 322
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+++C ++ P + + ++ A + R+ G+
Sbjct: 69 VKAKIMAHPHYHRLLAAYLNCQKIGAPPEVVARLEEACASMAAMGRAGGTCL-------- 120
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
E LD F+ Y +L ++++L + + EA++ IE+ +ALT E
Sbjct: 121 ----GEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRIESQFKALTIPCSSE 172
Query: 156 GTGATMSD 163
GA D
Sbjct: 173 SAGADAMD 180
>gi|20530671|gb|AAM27189.1|AF457120_1 knotted1-like homeodomain protein liguleless4a [Zea mays]
Length = 156
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
+L+KA+IA HP Y LL+A++ C +V P + L++ ++ + A+
Sbjct: 51 ELVKAQIAGHPRYPSLLSAYIECRKVGAPPEVATLLE-EIGRER--------CAAASAGG 101
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
L P ELD F+ Y VL +KE+L +
Sbjct: 102 EVGLDP----ELDEFMEAYCRVLERYKEELSR 129
>gi|449508861|ref|XP_004163429.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
Length = 346
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 18/111 (16%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA+I +HPL+ +LL A+V+C +V P P + A+L Q+ V + GS + A + N+ +
Sbjct: 99 KAKIMAHPLFPRLLTAYVNCQKVGAP----PEVVARLEQACAV--ATGSCRAAGHGNDPA 152
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQA 147
LD F+ Y +L ++++L + + EA++ IE+ L+A
Sbjct: 153 --------LDQFMEAYCEMLTKYEQELTKPFK----EAMLFFSRIESQLKA 191
>gi|195638046|gb|ACG38491.1| homeobox protein rough sheath 1 [Zea mays]
Length = 363
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 69/179 (38%), Gaps = 33/179 (18%)
Query: 8 VMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLP 67
V G SS G D IKA I SHP Y LLAA+++C +V P D
Sbjct: 85 VQGEMSSPAADGDADA------------IKARIMSHPQYSALLAAYLNCQKVGAPPDVSD 132
Query: 68 LIDAQL-----AQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQ 122
+ A AQ + R G ++ ELD F+ Y +L F E+
Sbjct: 133 RLSAMAAANLDAQPGPISRRRGPTTTRADD----------PELDQFMEAYCNMLVKFHEE 182
Query: 123 LQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDS 181
+ + ++ EA +E L + S E G+ S+DE D +D A D
Sbjct: 183 MARPIQ----EATEFFNSMERQLGSTISDSNCEVAGS--SEDEQDASCPEEIDPCAEDK 235
>gi|58011285|gb|AAW62517.1| KNOTTED1-like protein [Selaginella kraussiana]
Length = 460
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 18/142 (12%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+++A I SHP Y +L+ AH++C +VA + + ID +++++ Q
Sbjct: 215 MLRAAIVSHPHYPELVVAHMNCHKVAASPEVVSQID-------EIIQNFKDFQPPV---- 263
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLG 154
+ S ELD F+ Y +L + ++ VR EAV C++++ Q +T S
Sbjct: 264 -AASLGANPELDQFMVAYYSMLL----KCEKEVRKTFKEAVAFCKKLDQQFQVITNGSAS 318
Query: 155 EGTGATMSDDEDDLHMDFSLDQ 176
T SDD ++ + D S D+
Sbjct: 319 SVTSVE-SDDRNEAY-DSSEDE 338
>gi|4589880|dbj|BAA76903.1| homeobox 9 [Nicotiana tabacum]
Length = 322
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 19/118 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLP--LIDAQLAQSHHVLRSYGSLQQANNNN 93
I+A+I+SHPLY +LL ++ C +V P D++ L + + + + R L
Sbjct: 80 IRAKISSHPLYPKLLRTYIDCHKVGAPSDEIVDMLDNINIVHENDLSRRSNRLS------ 133
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGV 151
+ ELD F+ Y VL FK L++ EA +IE L L
Sbjct: 134 -------DDSELDAFMETYCDVLAKFKSDLERPFN----EATTFLNDIETQLTNLCAA 180
>gi|300174952|dbj|BAJ10711.1| shoot meristemless ortholog [Polypleurum stylosum]
Length = 352
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 6 LGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQ 65
+ V +++S G G + H+ T IKA+I SHP Y +LL+A+V+C ++ P +
Sbjct: 69 MNVNATANSTGAGCFFVDNDVHEGINTTCSIKAKIMSHPHYNRLLSAYVNCQKIGAPPEV 128
Query: 66 LPLIDAQLAQSHHVL-RSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQ 124
+ ++ A + L S G L Q LD F+ Y +L ++++L
Sbjct: 129 VARLEEARAAAAAALGPSDGCLGQ-------------DPALDQFMEAYCEMLTKYEQELS 175
Query: 125 QHVRVHAVEAVMGCREIENTLQALTGVSL-----GEGTGATMSDDEDDLHMDFSLDQSAS 179
+ ++ EA++ + +E +ALT S GEG S DE+ + +D A
Sbjct: 176 KPLK----EAMVFLQRVEYQFKALTVSSPNSGYSGEGNERNASSDEEGDGNNVFIDPQAE 231
Query: 180 D 180
D
Sbjct: 232 D 232
>gi|18389214|gb|AAL67666.1| hirzina [Antirrhinum majus]
Length = 353
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 24/148 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+V+C ++ P P + ++L ++ + +G
Sbjct: 107 LKAKIMAHPHYHRLLAAYVNCHKIGAP----PEVVSRLEEAAAAMARHG----------- 151
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
++S E LD + Y +L ++++L + + EA++ IE+ +ALT VS
Sbjct: 152 TISVGEDPGLDQLMEAYSEMLSKYEQELSKPFK----EAMLFLSRIESQFKALT-VSAAR 206
Query: 156 GTGATM---SDDEDDLHMDFSLDQSASD 180
G S++E D++ F +D A D
Sbjct: 207 GEAMFRNGSSEEEIDVNNSF-IDPQAED 233
>gi|218193821|gb|EEC76248.1| hypothetical protein OsI_13687 [Oryza sativa Indica Group]
Length = 357
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KAEI SHP LLAA++ C +V P D L + A A + + G ++ +
Sbjct: 81 MKAEIMSHPQCSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPRRD 140
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
P +LD F+ Y +L ++E+L++ + +EA +E L ++ + E
Sbjct: 141 DDVPD--HQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSMVETQLDSIAESNC-E 193
Query: 156 GTGATMSDDEDD 167
GTG+ S++E D
Sbjct: 194 GTGS--SEEEQD 203
>gi|356577702|ref|XP_003556963.1| PREDICTED: homeobox protein knotted-1-like 2-like, partial [Glycine
max]
Length = 323
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 25/148 (16%)
Query: 19 GGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRV-ATPIDQLPLIDAQLAQSH 77
GG S T V+ IKA+I +HP Y LL A++ C ++ ATP ++ A+
Sbjct: 51 GGSPTSS----TGEVEAIKAKIIAHPQYSNLLEAYMDCQKIGATPEVVARMVAAKQEFEA 106
Query: 78 HVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMG 137
S GS + + + ELD F+ Y +L ++E+L + ++ EA+
Sbjct: 107 RQRSSVGSRETSKD-----------PELDQFMEAYYDMLVKYREELTRPIQ----EAMDF 151
Query: 138 CREIENTLQALTGVSLGEGTGATMSDDE 165
R IE L L G +SDD+
Sbjct: 152 MRRIETQLNMLCN-----GPVRILSDDK 174
>gi|55669503|gb|AAV54619.1| homeobox transcription factor KN2 [Pinus taeda]
Length = 429
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 21/122 (17%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + +DA S + N +
Sbjct: 168 IKSKILAHPQYPNLLGAYIDCQKIGAPPEVASRLDAL------------SHEYENQQHRS 215
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
SLS ELD F+ Y +L + E+L + + EA+ ++IE L SLG+
Sbjct: 216 SLSIGMDPELDQFMEAYCEMLTKYHEELTKPFK----EAMSFLKKIEAQLN-----SLGK 266
Query: 156 GT 157
GT
Sbjct: 267 GT 268
>gi|26023939|gb|AAN77691.1|AF483278_1 KNOTTED1-like homeodomain protein 3 [Picea abies]
Length = 433
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + + +DA + R Y N
Sbjct: 173 IKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-------LTREY------QNQQRR 219
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
++S ELD F+ Y +L + E+L + + EA+ +IE SLG+
Sbjct: 220 TVSIGMDPELDQFMEAYCEILTKYHEELAKPFK----EAMTFLMKIEAQFN-----SLGK 270
Query: 156 GT 157
GT
Sbjct: 271 GT 272
>gi|161105475|gb|ABR26245.2| transcription factor STM1 [Euphorbia esula]
Length = 217
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 16/121 (13%)
Query: 29 QTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQ 88
T+T +KA+I +HP Y +LLAA+++C +V P P I A+L ++ + G
Sbjct: 113 NTSTTASVKAKIMAHPHYHRLLAAYINCQKVGAP----PEIAARLEEACASAATMGP--- 165
Query: 89 ANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ L E LD F+ Y +L ++++L + + EA++ + +E+ +AL
Sbjct: 166 ---SGTSCLG--EDPALDQFMEAYCEMLTKYEQELFKPFK----EAMLFLQRVESQFKAL 216
Query: 149 T 149
T
Sbjct: 217 T 217
>gi|160420032|dbj|BAF93479.1| class-I knotted1-like homeobox protein IBKN2 [Ipomoea batatas]
Length = 382
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 17/116 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN--NNN 93
+KA+I +HP Y LL A+V C +V P P + A+L+ + L Q+A+ +
Sbjct: 121 MKAKIIAHPQYSNLLEAYVDCQKVGAP----PEMAARLSAARQELE---GKQRASFIGSR 173
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ S P ELD F+ Y +L ++++L + + EA+ R IE+ L L+
Sbjct: 174 DSSKDP----ELDQFMEAYYDMLMKYRDELTRPFQ----EAMEFMRRIESQLNMLS 221
>gi|19908859|gb|AAM03026.1|AF482994_1 homeodomain protein KNAT1/BP [Arabidopsis thaliana]
Length = 400
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 31 ATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN 90
+ V+ +KA+I +HP Y LL A++ C ++ P D + I A + + + QQ
Sbjct: 131 SDVEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITA-------ARQDFEARQQ-- 181
Query: 91 NNNNHSLSPHERQ-ELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ S+S R ELD F+ Y +L ++E+L + ++ EA+ R IE+ L L
Sbjct: 182 -RSTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQ----EAMEFIRRIESQLSML 235
>gi|449516639|ref|XP_004165354.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
6-like [Cucumis sativus]
Length = 324
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 30/142 (21%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V +IKA+I+SHP Y +LL A++ C +V P P I H+L G Q+++
Sbjct: 79 VNVIKAKISSHPTYPRLLDAYIDCQKVGAP----PEI-------AHLLE--GIRQESDLC 125
Query: 93 NNHSLS------PHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQ 146
N H+++ P ELD F+ Y +L +K L++ EA +IE L
Sbjct: 126 NRHAVTTCLGVDP----ELDEFMETYCDMLVKYKSDLKRPFD----EATTFLNKIELQLS 177
Query: 147 ALTGVSLGEG---TGATMSDDE 165
L + GA SD+E
Sbjct: 178 NLCNGAFSRSLSDDGAVSSDEE 199
>gi|383212085|dbj|BAM08929.1| class I knotted1-like homeobox protein [Asparagus officinalis]
Length = 343
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 17/133 (12%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQ-SHHVLRSYGSLQQANNN 92
+ IKA+I SHP Y LL A++ C +V P P + A+L+ + + + +
Sbjct: 76 ETIKAKIVSHPQYSTLLGAYMDCQKVGAP----PELAARLSVIAREIEAQQQAAAASCRR 131
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
+ S P ELD F+ Y +L ++E+L + ++ EA+ R +E+ L ++T +
Sbjct: 132 DASSADP----ELDQFMEAYCNMLVKYREELTRPLQ----EAMDFLRRVESQLNSITNGA 183
Query: 153 LGEGTGATMSDDE 165
T + S DE
Sbjct: 184 ----TASIFSTDE 192
>gi|19908861|gb|AAM03027.1|AF482995_1 homeodomain protein KNAT1/BP [Arabidopsis thaliana]
Length = 400
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 31 ATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN 90
+ V+ +KA+I +HP Y LL A++ C ++ P D + I A + + + QQ
Sbjct: 131 SDVEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITA-------ARQDFEARQQ-- 181
Query: 91 NNNNHSLSPHERQ-ELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ S+S R ELD F+ Y +L ++E+L + ++ EA+ R IE+ L L
Sbjct: 182 -RSTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQ----EAMEFIRRIESQLSML 235
>gi|242089383|ref|XP_002440524.1| hypothetical protein SORBIDRAFT_09g002520 [Sorghum bicolor]
gi|241945809|gb|EES18954.1| hypothetical protein SORBIDRAFT_09g002520 [Sorghum bicolor]
Length = 303
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IA HP Y LL+A++ C +V P + L++ ++ + S G
Sbjct: 49 TELVKAQIAGHPRYPSLLSAYIECRKVGAPPEVATLLE-EIGRERCAAASAG-------- 99
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
L P ELD F+ Y VL +KE+L +
Sbjct: 100 GEVGLDP----ELDEFMEAYCRVLERYKEELSR 128
>gi|194695204|gb|ACF81686.1| unknown [Zea mays]
gi|408690268|gb|AFU81594.1| HB-type transcription factor, partial [Zea mays subsp. mays]
gi|414873087|tpg|DAA51644.1| TPA: putative knotted-like transcription factor family protein [Zea
mays]
Length = 364
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 62/150 (41%), Gaps = 21/150 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQL-----AQSHHVLRSYGSLQQAN 90
IKA I SHP Y LLAA++ C +V P D + A AQ + R G
Sbjct: 102 IKARIMSHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAANLDAQPGPISRRRGPTTTRA 161
Query: 91 NNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTG 150
++ ELD F+ Y +L F E++ + ++ EA +E L +
Sbjct: 162 DDP----------ELDQFMEAYCNMLVKFHEEMARPIQ----EATEFFNSMERQLGSTIS 207
Query: 151 VSLGEGTGATMSDDEDDLHMDFSLDQSASD 180
S E G+ S+DE D +D A D
Sbjct: 208 DSNCEVAGS--SEDEQDASWPEEIDPCAED 235
>gi|15236418|ref|NP_192555.1| homeobox protein knotted-1-like 1 [Arabidopsis thaliana]
gi|1170676|sp|P46639.1|KNAT1_ARATH RecName: Full=Homeobox protein knotted-1-like 1; AltName:
Full=Protein BREVIPEDICELLUS; AltName: Full=Protein
KNAT1
gi|4689449|gb|AAD27897.1|AC006267_2 KNAT1 homeobox-like protein [Arabidopsis thaliana]
gi|606950|gb|AAA67881.1| knotted-like homeobox protein [Arabidopsis thaliana]
gi|7267455|emb|CAB81151.1| KNAT1 homeobox-like protein [Arabidopsis thaliana]
gi|19424027|gb|AAL87309.1| putative KNAT1 homeobox protein [Arabidopsis thaliana]
gi|21280867|gb|AAM45030.1| putative KNAT1 homeobox protein [Arabidopsis thaliana]
gi|332657197|gb|AEE82597.1| homeobox protein knotted-1-like 1 [Arabidopsis thaliana]
Length = 398
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 31 ATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN 90
+ V+ +KA+I +HP Y LL A++ C ++ P D + I A + + + QQ
Sbjct: 129 SDVEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITA-------ARQDFEARQQ-- 179
Query: 91 NNNNHSLSPHERQ-ELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ S+S R ELD F+ Y +L ++E+L + ++ EA+ R IE+ L L
Sbjct: 180 -RSTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQ----EAMEFIRRIESQLSML 233
>gi|371767724|gb|AEX56217.1| knotted-like 2 protein [Dactylorhiza fuchsii]
Length = 327
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 21/138 (15%)
Query: 11 SSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLID 70
+ ++G GG D S LIKA+IA HP Y LL+A++ C +V P ++ L+
Sbjct: 37 APAAGCGGVATDCS---------DLIKAKIARHPRYPSLLSAYIDCRKVGAP-PEVALLL 86
Query: 71 AQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVH 130
++A + YG N + + P + ELD + Y VL +K++L +
Sbjct: 87 EEIATER--IADYG----VNECGSAAEIPAD-PELDKLMDSYCRVLAWYKDELSKPFE-- 137
Query: 131 AVEAVMGCREIENTLQAL 148
EA IE ++L
Sbjct: 138 --EAASFLSSIETQFRSL 153
>gi|255540617|ref|XP_002511373.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223550488|gb|EEF51975.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 328
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 76/184 (41%), Gaps = 32/184 (17%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
I+A+IA+HPLY +LL A++ C +V P + ++D +R L + +
Sbjct: 87 IRAKIAAHPLYPKLLQAYIDCQKVGAPPEMAYMLDE--------IRQESDLSKRPSTITS 138
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
L ELD F+ Y +L +K L + EA +IE L L +
Sbjct: 139 CLG--ADPELDEFMETYCDILVKYKSDLSRPFN----EATTFLNDIEAQLNTLCNTT--- 189
Query: 156 GTGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVM 215
T T DE S D+ G G L ++ R+ ER ELK +L Q
Sbjct: 190 -TSRTHVSDE----------AVGSSDEDISG-GELEAQDSVRANEER---ELKDKLLQKY 234
Query: 216 TTYI 219
+ YI
Sbjct: 235 SGYI 238
>gi|224121810|ref|XP_002318678.1| predicted protein [Populus trichocarpa]
gi|222859351|gb|EEE96898.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
I+A+IASHPLY +LL A++ C +V P + L+D +R + + +N+
Sbjct: 11 IRAKIASHPLYPKLLEAYIDCQKVGAPPEMAYLLDE--------IRLVNDVSKGSNDTVA 62
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
S + ELD F+ Y VL +K L +
Sbjct: 63 SCLGAD-PELDEFMETYCDVLMKYKADLSR 91
>gi|218193479|gb|EEC75906.1| hypothetical protein OsI_12975 [Oryza sativa Indica Group]
Length = 336
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+IKA+I SHPLY LL A V C +V P + + + + LA L SY + +
Sbjct: 68 MIKAKIMSHPLYPSLLRAFVDCKKVGAPPEVVGRLSS-LAVVTDELESY-----SGDRWQ 121
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ P ELD F+ Y +L + ++L + ++ EA R IE + +L
Sbjct: 122 PAQQPAADPELDQFMETYCYMLTRYGQELARPIQ----EAEEFFRGIEEQIDSLA 172
>gi|449434394|ref|XP_004134981.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
gi|449518023|ref|XP_004166043.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
Length = 340
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 14/114 (12%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+V+C +V P P + A+L + + S ++ NN
Sbjct: 84 VKAKIMAHPHYHRLLAAYVNCRKVGAP----PEVVARLEE------ACASAVTMSSGNNG 133
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
E LD F+ Y +L ++++L + R +A++ + I++ +AL+
Sbjct: 134 GGCIGEDPALDQFMEAYCEMLTKYEQELSKPFR----DAMLFLQRIDSQFKALS 183
>gi|115461893|ref|NP_001054546.1| Os05g0129700 [Oryza sativa Japonica Group]
gi|75139800|sp|Q7GDL5.1|KNOSA_ORYSJ RecName: Full=Homeobox protein knotted-1-like 10; AltName:
Full=Homeobox protein HOS9; AltName: Full=Homeobox
protein OSH71; AltName: Full=Homeobox protein
knotted-1-like 2; Short=Oskn2
gi|221272025|sp|A2Y007.2|KNOSA_ORYSI RecName: Full=Homeobox protein knotted-1-like 10; AltName:
Full=Homeobox protein HOS9; AltName: Full=Homeobox
protein OSH71; AltName: Full=Homeobox protein
knotted-1-like 2; Short=Oskn2
gi|2935573|gb|AAC32817.1| KNOX class homeodomain protein [Oryza sativa Indica Group]
gi|4887610|dbj|BAA77818.1| HOS9 [Oryza sativa Japonica Group]
gi|5103729|dbj|BAA79226.1| knotted1-type homeobox protein OSH71 [Oryza sativa]
gi|51854371|gb|AAU10751.1| KNOX class homeodomain protein [Oryza sativa Japonica Group]
gi|113578097|dbj|BAF16460.1| Os05g0129700 [Oryza sativa Japonica Group]
gi|215767229|dbj|BAG99457.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196023|gb|EEC78450.1| hypothetical protein OsI_18312 [Oryza sativa Indica Group]
Length = 311
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 62/156 (39%), Gaps = 21/156 (13%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IA HP Y LL+A++ C +V P + L++ + A
Sbjct: 52 TELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRG------GGGGATAG 105
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
L P ELD F+ Y VL +KE+L + EA I L +L G
Sbjct: 106 GEIGLDP----ELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCG-- 155
Query: 153 LGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFG 188
GA D D + S D+ S D FG
Sbjct: 156 -----GAPPPTDNSDEMVGSSEDEPCSGDADAADFG 186
>gi|285804235|gb|ADC35598.1| class I KNOX homeobox transcription factor KNOPE6 [Prunus persica]
gi|289655984|gb|ADD14040.1| class 1 KNOTTED-like transcription factor KNOPE6 [Prunus persica]
Length = 334
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
LIK +IA+HP + L+ A++ C +V P++ L++ SHH + + +
Sbjct: 73 LIKTQIANHPRFPDLVDAYLECQKVGAPLEMKSLLEEIGRVSHHPMSTCSEI-------- 124
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
P ELD F+ Y VL +KE+L +
Sbjct: 125 -GADP----ELDEFMESYCEVLRGYKEELSK 150
>gi|449435396|ref|XP_004135481.1| PREDICTED: homeobox protein knotted-1-like 6-like [Cucumis sativus]
Length = 316
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 30/142 (21%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V +IKA+I+SHP Y +LL A++ C +V P P I H+L G Q+++
Sbjct: 79 VNVIKAKISSHPTYPRLLDAYIDCQKVGAP----PEI-------AHLLE--GIRQESDLC 125
Query: 93 NNHSLS------PHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQ 146
N H+++ P ELD F+ Y +L +K L++ EA +IE L
Sbjct: 126 NRHAVTTCLGVDP----ELDEFMETYCDMLVKYKSDLKRPFD----EATTFLNKIELQLS 177
Query: 147 ALTGVSLGEG---TGATMSDDE 165
L + GA SD+E
Sbjct: 178 NLCNGAFSRSLSDDGAVSSDEE 199
>gi|66865821|gb|AAY57559.1| knotted 1 [Zea mays]
Length = 211
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V+ IKA+I SHP Y LL A++ C +V P P + A+L + ++
Sbjct: 4 VEAIKAKIISHPHYYSLLTAYLECNKVGAP----PEVSARLTEIAQ------EVEARQRT 53
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL--TG 150
L+ ELD F+ Y +L F+E+L + ++ EA+ R +E+ L +L +G
Sbjct: 54 ALGGLAAATEPELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLSISG 109
Query: 151 VSLGE--GTGATMSDDE 165
SL +G++ D E
Sbjct: 110 RSLRNILSSGSSEEDQE 126
>gi|383212083|dbj|BAM08928.1| class I knotted1-like homeobox protein [Asparagus asparagoides]
Length = 341
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 17/133 (12%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQ-SHHVLRSYGSLQQANNN 92
+ IKA+I SHP Y LL A++ C +V P P + A+L+ + + + +
Sbjct: 74 ETIKAKIVSHPQYSALLGAYMDCQKVGAP----PELAARLSVIAREIEAQQQAAAASCRR 129
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
+ S P ELD F+ Y +L ++E+L + ++ EA+ R +E+ L ++T +
Sbjct: 130 DASSTDP----ELDQFMEAYCNMLVKYREELTRPLQ----EAMDFLRRVESQLNSITNGA 181
Query: 153 LGEGTGATMSDDE 165
T + S DE
Sbjct: 182 ----TASIFSTDE 190
>gi|255542896|ref|XP_002512511.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223548472|gb|EEF49963.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 327
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 26 HHDQTAT---VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRS 82
HH Q + + LIK +IA HP Y L++A++ C +V P + L++ ++ + ++ ++
Sbjct: 55 HHAQVSDSDMLGLIKTQIAHHPRYPDLVSAYIECQKVGAPPEMTSLLE-EIGRENYSIKG 113
Query: 83 YGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIE 142
A+ ELD F+ Y VL +KE+L + EA +IE
Sbjct: 114 CSGEMGAD------------PELDEFMESYCEVLHRYKEELSKPFD----EATTFFSDIE 157
Query: 143 NTLQALTGVSL 153
+ L L +L
Sbjct: 158 SQLSNLCKGTL 168
>gi|33333548|gb|AAQ11890.1| knotted 3 [Nicotiana tabacum]
Length = 340
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 17/129 (13%)
Query: 23 VSGHHDQTAT---VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHV 79
V HH+ ++ V +KA+I +HP LL A++ C +V P P + A+L+
Sbjct: 63 VQNHHESESSGSEVDALKAKIIAHPQCSNLLDAYMDCQKVGAP----PEVVARLS----A 114
Query: 80 LRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCR 139
+R ++Q +++ + +++ + ELD F+ Y +L ++E+L + + EA+ R
Sbjct: 115 VRQEFEVRQRDSSTDRNIA--KDPELDQFMEAYYDMLVKYREELTRPLH----EAMDFMR 168
Query: 140 EIENTLQAL 148
+IE L L
Sbjct: 169 KIETQLNML 177
>gi|3928843|gb|AAC84001.1| homeobox protein [Picea abies]
Length = 434
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA+I +HP Y LL A++ C ++ P + + +DA + Y
Sbjct: 161 SSHFSGGKEAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-------LTHEY 213
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIEN 143
+ QQ + + P ELD F+ Y +L + E+L + + EA+ ++IE
Sbjct: 214 EN-QQHRTTVSIGMDP----ELDQFMEAYCEMLTKYHEELTKPFK----EAMSFLKKIEA 264
Query: 144 TLQALT 149
L +L+
Sbjct: 265 QLNSLS 270
>gi|356567654|ref|XP_003552032.1| PREDICTED: homeobox protein knotted-1-like 6-like isoform 2
[Glycine max]
Length = 324
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 29/157 (18%)
Query: 22 DVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLR 81
++ HHD ++ LIKA+IASHP Y +LL A++ C +V P + L++ +R
Sbjct: 73 EIQRHHDASS---LIKAKIASHPHYPRLLQAYIECQKVGAPPELTCLLEE--------IR 121
Query: 82 SYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREI 141
++Q + + + ELD F+ Y +L +K L + EA +I
Sbjct: 122 RENDVRQRDVVVSTCVGAD--PELDEFMETYCDMLVKYKSDLTRPFD----EATTFLNKI 175
Query: 142 ENTLQALT------------GVSLGEGTGATMSDDED 166
E L L GVS EG A D +D
Sbjct: 176 ETQLTDLCSRSSLPTLYDDGGVSSEEGFSAGDGDPQD 212
>gi|300174940|dbj|BAJ10705.1| shoot meristemless ortholog [Hydrobryum japonicum]
Length = 351
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 11 SSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLID 70
+++S G G + H+ T IKA+I SHPLY +LL+A+V+C +V P + ++
Sbjct: 74 TANSTGAGCFFVDNNVHEGINTTCSIKAKIMSHPLYNRLLSAYVNCQKVGAPPE---VVA 130
Query: 71 AQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVH 130
+ G ++ L + LD F+ Y +L ++++L + ++
Sbjct: 131 RLEEARAAAAAALGP-------SDACLG--QDPALDQFMEAYCEMLTKYEQELSKPLK-- 179
Query: 131 AVEAVMGCREIENTLQALTGVSL-----GEGTGATMSDDEDDLHMDFSLDQSASD 180
EA++ + +E +ALT S GE S DE+ + +D A D
Sbjct: 180 --EAMVFLQRVEYQFKALTVSSPNSGYSGEANERNASSDEEGDGNNVFIDPQAED 232
>gi|363807946|ref|NP_001242710.1| uncharacterized protein LOC100805837 [Glycine max]
gi|255642659|gb|ACU21614.1| unknown [Glycine max]
Length = 350
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 16/139 (11%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+V+C +V P P + A+L ++ S ++
Sbjct: 94 VKAKIMAHPHYRRLLAAYVNCQKVGAP----PEVVARLEEA---CASAATMAGDAAAAAG 146
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL----TGV 151
S E LD F+ Y +L ++++L + ++ EA++ + IE + L T
Sbjct: 147 SSCIGEDPALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRIECQFKNLTISSTDF 202
Query: 152 SLGEGTGATMSDDED-DLH 169
+ EG S +ED DLH
Sbjct: 203 ACNEGAERNGSSEEDVDLH 221
>gi|540536|dbj|BAA03959.1| homeobox protein [Oryza sativa Japonica Group]
Length = 361
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 14/132 (10%)
Query: 18 GGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSH 77
G + S V+ IKA+I SHP Y LLAA++ C +V P P + A+L
Sbjct: 86 GKAKEASASASYAPDVEAIKAKIISHPHYSSLLAAYLDCQKVGAP----PEVAARLTAVA 141
Query: 78 HVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMG 137
L L+Q L ELD F+ Y +L ++E+L + ++ EA+
Sbjct: 142 QDLE----LRQRTALG--VLGAATEPELDQFMEAYHEMLVKYREELTRPLQ----EAMEF 191
Query: 138 CREIENTLQALT 149
R +E L L+
Sbjct: 192 LRRVETQLNTLS 203
>gi|329757143|gb|AEC04751.1| knotted-like homeobox KNOX2 [Fragaria vesca]
Length = 432
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 21/132 (15%)
Query: 25 GHHDQTATVQ--------LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQS 76
GH+DQ VQ IKA+I +HP Y LL A++ C RV P + + + A A+
Sbjct: 97 GHNDQQLPVQQQNENEVEAIKAKIIAHPHYSNLLQAYMDCQRVGAPSEVVARLSA--ARQ 154
Query: 77 HHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVM 136
V R S+ + ++ ELD F+ Y +L ++E+L + ++ EA+
Sbjct: 155 EFVARQRSSVSSRDASSKDP-------ELDQFMEAYYDMLVKYREELTRPIQ----EAMD 203
Query: 137 GCREIENTLQAL 148
++IE L L
Sbjct: 204 FMKKIETQLNML 215
>gi|289655986|gb|ADD14041.1| class 1 KNOTTED-like transcription factor STM-like1 [Prunus
persica]
Length = 329
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 17/115 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
++A+I +HPL+ +LLA++VSC +V P P + A+L Q+ +N+
Sbjct: 70 MEAKIMAHPLFPRLLASYVSCQKVGAP----PEVVARLEQACSA--------AVHNSEAA 117
Query: 96 SLSPHERQE-LDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
L + LD F+ Y +L ++E+L + + EA++ +I++ LQALT
Sbjct: 118 CLGGGDPDPALDKFMEAYCEMLTKYEEELTKPFK----EAMLFLSKIDSQLQALT 168
>gi|340764130|gb|AEK69289.1| HIRZINA-like protein [Linaria vulgaris]
Length = 367
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 62/114 (54%), Gaps = 16/114 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I SHP Y +LLAA+V+C ++ P + + +L ++ + RS+G LQ
Sbjct: 107 LKAKIMSHPHYHRLLAAYVNCQKIGAPDE----VVERLEEAAAMCRSHG-LQG------- 154
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
S+ E LD F+ Y +L ++++L + ++ EA++ IE+ +A+
Sbjct: 155 SICVGEDPSLDQFMEAYSEMLTKYEQELSKPLK----EAMLFFSRIESQFKAIA 204
>gi|242033395|ref|XP_002464092.1| hypothetical protein SORBIDRAFT_01g012200 [Sorghum bicolor]
gi|241917946|gb|EER91090.1| hypothetical protein SORBIDRAFT_01g012200 [Sorghum bicolor]
Length = 334
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 18/147 (12%)
Query: 22 DVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLR 81
D S + ++IKA+I SHPLY LL A + C +V P + + + A LA +
Sbjct: 50 DPSRQSNSERGSEIIKAKIMSHPLYPALLRAFIDCRKVGAPPETVGRLSA-LADEVEM-- 106
Query: 82 SYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREI 141
N+++ P + ELD F+ Y +L ++++L + ++ EA R +
Sbjct: 107 --------NSDDRQEQRPAD-PELDQFMEIYCHMLVRYRQELTRPIQ----EADEFFRSM 153
Query: 142 ENTLQALTGVSLG--EGTGATMSDDED 166
E + + + G EG G++ D+++
Sbjct: 154 EAQIDSFSLDDNGYEEGGGSSDEDEQE 180
>gi|285804237|gb|ADC35599.1| class I KNOX homeobox transcription factor STM-like 1 [Prunus
persica]
Length = 329
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 17/115 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
++A+I +HPL+ +LLA++VSC +V P P + A+L Q+ +N+
Sbjct: 70 MEAKIMAHPLFPRLLASYVSCQKVGAP----PEVVARLEQACSA--------AVHNSEAA 117
Query: 96 SLSPHERQE-LDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
L + LD F+ Y +L ++E+L + + EA++ +I++ LQALT
Sbjct: 118 CLGGGDPDPALDQFMEAYCEMLTKYEEELTKPFK----EAMLFLSKIDSQLQALT 168
>gi|4099828|gb|AAD00692.1| homeobox transcription factor SKN2 [Picea mariana]
Length = 442
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA+I +HP Y LL A++ C ++ P + + +DA + Y
Sbjct: 169 SSHFSGGNEAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-------LTHEY 221
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIEN 143
+ QQ + + P ELD F+ Y +L + E+L + + EA+ ++IE
Sbjct: 222 EN-QQHRTTVSIGMDP----ELDQFMEAYCEMLTKYHEELTKPFK----EAMSFLKKIEA 272
Query: 144 TLQALT 149
L +L+
Sbjct: 273 QLNSLS 278
>gi|5103725|dbj|BAA79224.1| knotted1-type homeobox protein OSH6 [Oryza sativa]
Length = 301
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 16/133 (12%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IA HP Y LL+A++ C +V P + L+ + R +
Sbjct: 40 TELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLL-------KEIGRERRAGGGGGGA 92
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL-TGV 151
+ P ELD F+ Y VL +KE+L + EA I+ L L +G
Sbjct: 93 GQIGVDP----ELDEFMEAYCRVLVRYKEELSRPFD----EAASFLSSIQTQLSNLCSGA 144
Query: 152 SLGEGTGATMSDD 164
+ T AT SD+
Sbjct: 145 TSPPATTATHSDE 157
>gi|357115636|ref|XP_003559594.1| PREDICTED: homeobox protein knotted-1-like 4-like [Brachypodium
distachyon]
Length = 313
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 11 SSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLID 70
S+S G + S + + IKA+I SHPLY LL + + C +V P + + +
Sbjct: 27 STSPPAPAPGSEPSTRSNHERSTDTIKAKIMSHPLYPALLRSFIECQKVGAPQEVVGRLC 86
Query: 71 AQLAQSHHVLRSYGSLQQ-ANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRV 129
A LA G L+ + SL ELD F+ Y VL +K++L + ++
Sbjct: 87 A-LA---------GELESDCGDQRQDSLD----AELDEFMETYCHVLVRYKQELTRPIQ- 131
Query: 130 HAVEAVMGCREIENTLQALT 149
EA R+IE + + T
Sbjct: 132 ---EADQFFRDIEAQMDSFT 148
>gi|345649237|gb|AEO14149.1| KNAT1 protein [Eschscholzia californica subsp. californica]
Length = 405
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 21/155 (13%)
Query: 17 GGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQS 76
GG GG + + IKA+I +HP Y LL A++ C +V P P + + L Q+
Sbjct: 131 GGRGG-------ENNDLDAIKAKIIAHPQYFNLLDAYMDCQKVGAP----PEVVSWLTQA 179
Query: 77 HHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVR-----VHA 131
+ + Q+++ N L + ELD F+ Y +L ++E+L + ++ +
Sbjct: 180 R---QEFVERQKSSVNCGDKLVSAD-PELDQFMEAYYDMLVKYREELTRPLQEAMEFMRK 235
Query: 132 VEAVMGCREIENTLQALTGVSLGEGTGATMSDDED 166
+EA + I ++ T EG G++ D E+
Sbjct: 236 IEAQLNTLCINGPIRVFTDEKC-EGAGSSEEDQEN 269
>gi|115436138|ref|NP_001042827.1| Os01g0302500 [Oryza sativa Japonica Group]
gi|75171952|sp|Q9FP29.1|KNOS1_ORYSJ RecName: Full=Homeobox protein knotted-1-like 1; AltName:
Full=Homeobox protein HOS16; AltName: Full=Homeobox
protein OSH6
gi|11967917|dbj|BAB19772.1| putative knotted1-type homeobox protein [Oryza sativa Japonica
Group]
gi|21104563|dbj|BAB93157.1| knotted1-type homeobox protein OSH6 [Oryza sativa Japonica Group]
gi|113532358|dbj|BAF04741.1| Os01g0302500 [Oryza sativa Japonica Group]
Length = 301
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 16/133 (12%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IA HP Y LL+A++ C +V P + L+ + R +
Sbjct: 40 TELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLL-------KEIGRERRAGGGGGGA 92
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL-TGV 151
+ P ELD F+ Y VL +KE+L + EA I+ L L +G
Sbjct: 93 GQIGVDP----ELDEFMEAYCRVLVRYKEELSRPFD----EAASFLSSIQTQLSNLCSGA 144
Query: 152 SLGEGTGATMSDD 164
+ T AT SD+
Sbjct: 145 TSPPATTATHSDE 157
>gi|108885278|sp|P46609.2|KNOS6_ORYSJ RecName: Full=Homeobox protein knotted-1-like 6; AltName:
Full=Homeobox protein OSH1; AltName: Full=Homeobox
protein knotted-1-like 1; Short=Oskn1
gi|478420|pir||JQ2379 homeobox 1 protein OSH1 - rice
gi|41469276|gb|AAS07158.1| homeobox 1 protein OSH1 [Oryza sativa Japonica Group]
gi|108710856|gb|ABF98651.1| Homeobox protein OSH1, putative, expressed [Oryza sativa Japonica
Group]
gi|108710857|gb|ABF98652.1| Homeobox protein OSH1, putative, expressed [Oryza sativa Japonica
Group]
gi|284431774|gb|ADB84628.1| homeobox protein [Oryza sativa Japonica Group]
Length = 361
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V+ IKA+I SHP Y LLAA++ C +V P P + A+L L L+Q
Sbjct: 101 VEAIKAKIISHPHYSSLLAAYLDCQKVGAP----PEVAARLTAVAQDLE----LRQRTAL 152
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
L ELD F+ Y +L ++E+L + ++ EA+ R +E L L+
Sbjct: 153 G--VLGAATEPELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNTLS 203
>gi|329757147|gb|AEC04753.1| knotted-like homeobox KNOX4 [Fragaria vesca]
Length = 348
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHV-LRSYGSLQQANNNNN 94
A+IASHPLY LL A++ C +V P + +++ +S + R+ GS
Sbjct: 86 FNAKIASHPLYPNLLQAYIDCQKVGAPPELAHILEKIRRESDQLSRRTVGSTCMG----- 140
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLG 154
+ P ELD F+ Y +L +K L + EA+ +E L L G +
Sbjct: 141 --VDP----ELDEFMETYCGILLKYKSDLTKPFN----EAITFLNSMETQLNNLAGANTT 190
Query: 155 EG 156
+G
Sbjct: 191 KG 192
>gi|356501985|ref|XP_003519803.1| PREDICTED: homeobox protein knotted-1-like 6-like [Glycine max]
Length = 308
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 28 DQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQ 87
D A ++KA+IASHP Y +LL A++ C +V P + L++ ++ + + +S
Sbjct: 59 DDVAATTVMKAKIASHPHYPRLLQAYIECQKVGAPPEIARLLE-EIRRENDPCKS----D 113
Query: 88 QANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQA 147
+++ P ELD F+ Y +L +K L + EA +IE L
Sbjct: 114 AVSSSTCFGADP----ELDEFMEAYCDMLVKYKSDLARPFD----EATTFLNKIEMQLSH 165
Query: 148 LTGVSLGEGTGATMSDDEDD 167
L TGA++S+ DD
Sbjct: 166 LC-------TGASVSNVSDD 178
>gi|357111616|ref|XP_003557608.1| PREDICTED: homeobox protein knotted-1-like 12-like [Brachypodium
distachyon]
Length = 350
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 20/121 (16%)
Query: 42 SHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHE 101
+HP Y LLAA++ C +V P + + + A A+ L S G +Q +
Sbjct: 95 AHPQYSALLAAYLDCQKVGAPPEVMEKLTAMAAK----LPSPGHHEQRGDP--------- 141
Query: 102 RQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATM 161
ELD F+ Y +L ++E+L + + EA+ + +E L ++TG G G+ A +
Sbjct: 142 --ELDQFMEAYCNMLAKYREELTRPIE----EAMEFLKRVEAQLDSITGAGHG-GSSARL 194
Query: 162 S 162
S
Sbjct: 195 S 195
>gi|284468451|gb|ADB90285.1| KNOX [Fragaria vesca]
Length = 330
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 28 DQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQ 87
DQ T +L+K +IA+HP Y L++A++ C +V P P I + L + + S
Sbjct: 57 DQGMT-ELMKTQIANHPRYPDLVSAYIDCQKVGAP----PEIKSLLEEVGRL-----SFP 106
Query: 88 QANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHV 127
+ + P ELD F+ Y VL T+KE+L + V
Sbjct: 107 TSTCRSEIGADP----ELDEFMDTYCGVLHTYKEELSKPV 142
>gi|2522484|gb|AAB81079.1| knotted class 1 homeodomain protein [Hordeum vulgare subsp.
vulgare]
Length = 364
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 14/120 (11%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A V+ IKA+I SHP + LLAA++ C +V P P + A+L L L+Q
Sbjct: 102 AADVEAIKAKIISHPHHSSLLAAYLDCQKVGAP----PEVSARLTAVAQDLE----LRQR 153
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
L ELD F+ Y +L ++E+L + ++ EA+ R +E L +L+
Sbjct: 154 TALGG--LGTATEPELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNSLS 207
>gi|258958638|gb|ACV88386.1| class I knox protein [Fragaria x ananassa]
Length = 330
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 28 DQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQ 87
DQ T +L+K +IA+HP Y L++A++ C +V P P I + L + + S
Sbjct: 57 DQGMT-ELMKTQIANHPRYPDLVSAYIDCQKVGAP----PEIKSLLEEVGRL-----SFP 106
Query: 88 QANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHV 127
+ + P ELD F+ Y VL T+KE+L + V
Sbjct: 107 TSTCRSEIGADP----ELDEFMDTYCGVLHTYKEELSKPV 142
>gi|351723761|ref|NP_001238058.1| homeobox protein SBH1 [Glycine max]
gi|1170312|sp|P46608.1|HSBH1_SOYBN RecName: Full=Homeobox protein SBH1
gi|485406|gb|AAA20882.1| SBH1 [Glycine max]
Length = 379
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+V+C +V P P + A+L ++ + A ++
Sbjct: 124 VKAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACASAATMAGGDAAAGSSCI 179
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT----GV 151
P LD F+ Y +L ++++L + ++ EA++ + IE + LT
Sbjct: 180 GEDP----ALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRIECQFKNLTISSSDF 231
Query: 152 SLGEGTGATMSDDED-DLHMDFSLDQSASDSHDLMG 186
+ EG S +ED DLH +D A D DL G
Sbjct: 232 ASNEGGDRNGSSEEDVDLHN--MIDPQAED-RDLKG 264
>gi|226508000|ref|NP_001149651.1| homeobox protein rough sheath 1 [Zea mays]
gi|32351469|gb|AAP76320.1| homeobox transcription factor GNARLY1 [Zea mays]
gi|195628960|gb|ACG36242.1| homeobox protein rough sheath 1 [Zea mays]
gi|414592152|tpg|DAA42723.1| TPA: gnarley1 [Zea mays]
Length = 360
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A IKA+I +HP Y LLAA++ C +V P D L + A A+ A
Sbjct: 88 AAEADAIKAKIVAHPQYSALLAAYLDCQKVGAPPDLLERLTAMAAK-----------LDA 136
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHV 127
H P + ELD F+ Y +L ++E+L + +
Sbjct: 137 RPPGRH--GPRD-PELDQFMEAYCNMLVKYREELTRPI 171
>gi|3327269|dbj|BAA31698.1| PKn1 [Ipomoea nil]
Length = 333
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 28 DQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQ 87
D + LIKA+IASHP Y +LL A++ C +V P + +D ++ + + + +
Sbjct: 92 DDDHGIGLIKAKIASHPSYPKLLEAYIDCQKVGAPPEIASFLD-EIRRENDLFK------ 144
Query: 88 QANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
+++ S + ELD F+ Y +L +K L +
Sbjct: 145 ---HDSRVSTCFGDDPELDIFMETYCDILVKYKSDLSR 179
>gi|195627526|gb|ACG35593.1| homeotic protein knotted-1 [Zea mays]
Length = 298
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IA HP Y LL+A++ C +V P + L++ ++ + S G
Sbjct: 43 TELVKAQIAGHPRYPSLLSAYIDCRKVGAPSEVATLLE-EIGRERCAAASAG-------G 94
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
+ P ELD F+ Y +L +KE+L +
Sbjct: 95 EVVGMDP----ELDEFMETYCRLLERYKEELSR 123
>gi|297813269|ref|XP_002874518.1| hypothetical protein ARALYDRAFT_489727 [Arabidopsis lyrata subsp.
lyrata]
gi|297320355|gb|EFH50777.1| hypothetical protein ARALYDRAFT_489727 [Arabidopsis lyrata subsp.
lyrata]
Length = 395
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 31 ATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN 90
+ V+ +KA+I +HP Y LL A++ C ++ P + + I A + + + QQ
Sbjct: 125 SDVEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPEVVDRITA-------ARQDFEARQQ-- 175
Query: 91 NNNNHSLSPHERQ-ELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
S+S R ELD F+ Y +L ++E+L + ++ EA+ R IE+ L L
Sbjct: 176 -RPTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQ----EAMEFIRRIESQLSMLC 230
Query: 150 GVSL--------GEGTGATMSDDEDD 167
+ G+ G SD+E +
Sbjct: 231 QSPIHILNNPADGKSEGMGSSDEEQE 256
>gi|225453414|ref|XP_002272026.1| PREDICTED: homeobox protein knotted-1-like 6-like [Vitis vinifera]
Length = 229
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 24/133 (18%)
Query: 16 GGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQ 75
GGG G +VS I+ +IA+HPLY +LL A++ C +V P + L++ ++ +
Sbjct: 69 GGGSGDEVSS---------AIRTQIATHPLYPKLLHAYIECQKVGAPPEVAYLLE-EIRR 118
Query: 76 SHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAV 135
+ R N S ELD F+ Y VL +K L + EA
Sbjct: 119 GSELCR----------RNTVSTCLGADPELDEFMETYCNVLMKYKSDLARPFD----EAT 164
Query: 136 MGCREIENTLQAL 148
IE L L
Sbjct: 165 AFLNNIETQLNTL 177
>gi|340764132|gb|AEK69290.1| INVAGINATA-like protein [Linaria vulgaris]
Length = 346
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 22/151 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLA+ V+C ++ P + ++ + + + R +G+
Sbjct: 91 LKAKIMAHPHYHKLLASFVNCQKIGAPAEVTARLEEACSSAASIGRGHGTSCIG------ 144
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT-GVSLG 154
E LD F+ Y +L +++ L + R EA++ +E +ALT S
Sbjct: 145 -----EDPALDQFMEAYCEMLTKYEQGLSKPFR----EAMLFLSRMECQFKALTVSSSDN 195
Query: 155 EGTGATM-----SDDEDDLHMDFSLDQSASD 180
G M S++E D++ +F +D A D
Sbjct: 196 SACGDAMDRQGSSEEEADMNNNF-IDPQAED 225
>gi|300676307|gb|ADK26523.1| HERMIT-like protein 2 [Petunia x hybrida]
Length = 332
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+IKA+I SHP Y +LL A++ C +V P + + +++ +R ++ N
Sbjct: 100 IIKAKIISHPYYPKLLDAYIDCQKVGAPSEMINILEE--------MRQQNDFRKPNAT-- 149
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLG 154
S+ ELD F+ Y +L +K L + EA IE L +L
Sbjct: 150 -SICIGADPELDEFMETYCDILVKYKSDLSRPFN----EATTFLNNIE-----LQLTNLC 199
Query: 155 EGTGATMSDDE 165
+ G+ SD+E
Sbjct: 200 KDDGSLSSDEE 210
>gi|315307479|gb|ADU04141.1| hypothetical protein [Gossypium hirsutum]
Length = 161
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 7/62 (11%)
Query: 8 VMGSSSSGGGGGGGDV-------SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVA 60
V G S S G D +G D + I+A+IASHPLY +LL AH+ C +V
Sbjct: 43 VFGLSGSSPGISDADSVIAEIPRAGFEDDRLSSTAIRAKIASHPLYPKLLQAHIDCHKVG 102
Query: 61 TP 62
TP
Sbjct: 103 TP 104
>gi|239819334|gb|ACS28249.1| BREVIPEDICELLUS [Brassica rapa]
Length = 383
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 20/142 (14%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
++ +KA+I +HP Y LL A++ C ++ P + + I A + + + QQ
Sbjct: 115 MESMKAKIIAHPHYSTLLHAYLDCQKIGAPPEVVDKITA-------ARQEFEARQQRPTA 167
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
+ +LS ELD F+ Y +L ++E+L + + EA+ R IE+ + L
Sbjct: 168 SVTALS--RDPELDQFMEAYCDMLVKYREELTRPIE----EAMEYIRRIESQISMLCQGP 221
Query: 153 L-------GEGTGATMSDDEDD 167
+ G+ G SD+E D
Sbjct: 222 IHILNNPDGKSEGMESSDEEQD 243
>gi|115470439|ref|NP_001058818.1| Os07g0129700 [Oryza sativa Japonica Group]
gi|75099746|sp|O80416.1|KNOSC_ORYSJ RecName: Full=Homeobox protein knotted-1-like 12; AltName:
Full=Homeobox protein HOS3; AltName: Full=Homeobox
protein OSH15; AltName: Full=Homeobox protein
knotted-1-like 3; Short=Oskn3
gi|221272020|sp|O65034.2|KNOSC_ORYSI RecName: Full=Homeobox protein knotted-1-like 12; AltName:
Full=Homeobox protein HOS3; AltName: Full=Homeobox
protein OSH15; AltName: Full=Homeobox protein
knotted-1-like 3; Short=Oskn3
gi|3327240|dbj|BAA31688.1| OSH15 [Oryza sativa Japonica Group]
gi|34395067|dbj|BAC84729.1| homeobox gene [Oryza sativa Japonica Group]
gi|113610354|dbj|BAF20732.1| Os07g0129700 [Oryza sativa Japonica Group]
gi|218199032|gb|EEC81459.1| hypothetical protein OsI_24763 [Oryza sativa Indica Group]
gi|222636372|gb|EEE66504.1| hypothetical protein OsJ_22961 [Oryza sativa Japonica Group]
gi|284431778|gb|ADB84630.1| homeobox protein [Oryza sativa Japonica Group]
Length = 355
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 29/150 (19%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A + IKA+I +HP Y LLAA++ C +V P + L + A A+ L
Sbjct: 85 AAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAK----------LDAR 134
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ + P ELD F+ Y +L ++E+L + + EA+ + +E+ L +
Sbjct: 135 PPGRHDARDP----ELDQFMEAYCNMLAKYREELTRPID----EAMEFLKRVESQLDTIA 186
Query: 150 GVS-----------LGEGTGATMSDDEDDL 168
G + L +G + EDD+
Sbjct: 187 GGAHGGGAGSARLLLADGKSECVGSSEDDM 216
>gi|4589884|dbj|BAA76905.1| homeobox 22 [Nicotiana tabacum]
Length = 319
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
Query: 21 GDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVL 80
G S D +IKA++ SHP Y + + A++ C +V P ++A +
Sbjct: 73 GSCSRRDDTEDASNIIKAKVVSHPFYPKFVRAYIDCQKVGAP--------PEIATVLEEI 124
Query: 81 RSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
R ++ N S+ ELD F+ Y +L +K L +
Sbjct: 125 RQQNDFRKPNAT---SICIGADPELDEFMETYCDILVKYKSDLSR 166
>gi|239616354|gb|ACR83812.1| brevipedicellus [Brassica napus]
Length = 358
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 20/142 (14%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
++ +KA+I +HP Y LL A++ C ++ P + + I A + + + QQ
Sbjct: 90 MESMKAKIIAHPHYSTLLHAYLDCQKIGAPPEVVDKITA-------ATQEFEARQQRPTA 142
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
+ +LS ELD F+ Y +L ++E+L + + EA+ R IE+ + L
Sbjct: 143 SVTALS--RDPELDQFMEAYCDMLVKYREELTRPIE----EAMEYIRRIESQISMLCQGP 196
Query: 153 L-------GEGTGATMSDDEDD 167
+ G+ G SD+E D
Sbjct: 197 IHILNNPDGKSEGMESSDEEQD 218
>gi|356506915|ref|XP_003522219.1| PREDICTED: homeobox protein knotted-1-like 2-like isoform 2
[Glycine max]
Length = 353
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
++ IKA+I HP Y LL ++ C +V P P + A+ A V ++ + Q++
Sbjct: 98 LEAIKAKIIDHPHYSNLLQVYMDCQKVGAP----PEVAARFAT---VKENFEARQRSLVR 150
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
S+ + ELD F+ Y +L ++E+L + + EA + IE+ L L +
Sbjct: 151 ---SMETCKDPELDQFMEAYYDMLVKYREELTRPIE----EAKDFMQRIESQLNTLCNGT 203
Query: 153 LGEGTGATMSDDEDD 167
E G++ +D+D+
Sbjct: 204 W-ENIGSSSEEDKDN 217
>gi|239819336|gb|ACS28250.1| BREVIPEDICELLUS [Brassica oleracea]
Length = 380
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 20/139 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y LL A++ C ++ P + + I A + + + QQ +
Sbjct: 115 MKAKIIAHPHYSTLLHAYLDCQKIGAPPEVVDKITA-------ARQEFEARQQRPTASVT 167
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL-- 153
+LS ELD F+ Y +L ++E+L + + EA+ R IE+ + L +
Sbjct: 168 ALS--RDPELDQFMEAYCDMLVKYREELTRPIE----EAMEYIRRIESQISMLCQGPIHI 221
Query: 154 -----GEGTGATMSDDEDD 167
G+ G SD+E D
Sbjct: 222 LNNPDGKSEGIESSDEEQD 240
>gi|4887608|dbj|BAA77817.1| HOS3 [Oryza sativa Japonica Group]
Length = 355
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 29/150 (19%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A + IKA+I +HP Y LLAA++ C +V P + L + A A+ L
Sbjct: 85 AAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAK----------LDAR 134
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ + P ELD F+ Y +L ++E+L + + EA+ + +E+ L +
Sbjct: 135 PPGRHDARDP----ELDQFMEAYCNMLAKYREELTRPID----EAMEFLKRVESQLDTIA 186
Query: 150 GVS-----------LGEGTGATMSDDEDDL 168
G + L +G + EDD+
Sbjct: 187 GGAHGGGAGSARLLLADGKSECVGSSEDDM 216
>gi|336112107|gb|AEI17372.1| Knox-like protein 1 [Arabidopsis lyrata]
Length = 388
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 31 ATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN 90
+ V+ +KA+I +HP Y LL A++ C ++ P + + I A + + + QQ
Sbjct: 125 SDVEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPEVVDRITA-------ARQDFEARQQ-- 175
Query: 91 NNNNHSLSPHERQ-ELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTL---- 145
S+S R ELD F+ Y +L ++E+L + ++ EA+ R IE+ L
Sbjct: 176 -RPTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQ----EAMEFIRRIESQLIMLC 230
Query: 146 ----QALTGVSLGEGTGATMSDDEDD 167
L + G+ G SD+E +
Sbjct: 231 QSPIHILNNPADGKSEGMGSSDEEQE 256
>gi|147810349|emb|CAN60889.1| hypothetical protein VITISV_041259 [Vitis vinifera]
Length = 328
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 30/115 (26%)
Query: 16 GGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLID----- 70
GGG G +VS I+A+IA+HPLY +LL A++ C +V P + L++
Sbjct: 69 GGGSGEEVSS---------AIRAKIATHPLYPKLLHAYIECQKVGAPPEVAYLLEEIRRG 119
Query: 71 AQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
++L + V G+ ELD F+ Y +L +K L +
Sbjct: 120 SELCRRXAVSTCLGA----------------DPELDEFMETYCDILVKYKSDLAR 158
>gi|30348869|gb|AAP31411.1|AF457122_1 knotted1-like homeodomain protein liguleless4b [Zea mays]
Length = 150
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 12/92 (13%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
+L+KA+IA HP Y LL+A++ C +V P + L++ ++ + S G
Sbjct: 44 ELVKAQIAGHPRYPSLLSAYIDCRKVGAPSEVATLLE-EIGRERCAAASAG-------GE 95
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
+ P ELD F+ Y +L +KE+L +
Sbjct: 96 VVGMDP----ELDEFMETYCRLLERYKEELSR 123
>gi|14456343|gb|AAK62559.1|AF284817_1 class 1 KNOTTED1-like protein MKN4 [Physcomitrella patens]
Length = 488
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 30/186 (16%)
Query: 19 GGGDVSGHHD----------------QTATVQLIKAEIASHPLYEQLLAAHVSCLRVATP 62
G G +G HD + QL++ I HPLY +L+ AH+S ++ P
Sbjct: 180 GSGSETGQHDRDDDEKNKATDRGKLPENEEEQLLRDAIVDHPLYPELVVAHISIFKIGAP 239
Query: 63 IDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQ 122
L +D + YG +++ N H + LD F+ Y+ +L F+E
Sbjct: 240 KGLLIKLDEMEKKFQRF--QYG---ESSWNVLHVTKFGQDPSLDFFMRSYIDLLTKFRED 294
Query: 123 LQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH 182
L+ A +++E+ L G + T D+ED+ D + D +
Sbjct: 295 LENPYNKFAQYKDKVTKDLED----LCGHYI-----ETTPDEEDNFGSDIGTKDMSQDLN 345
Query: 183 DLMGFG 188
DL G
Sbjct: 346 DLEILG 351
>gi|162464096|ref|NP_001105085.1| knotted related homeobox5 [Zea mays]
gi|30348865|gb|AAP31410.1|AF457119_1 knotted1-like homeodomain protein liguleless4b [Zea mays]
gi|194708132|gb|ACF88150.1| unknown [Zea mays]
gi|413942049|gb|AFW74698.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 298
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IA HP Y LL+A++ C +V P + L++ ++ + S G
Sbjct: 43 TELVKAQIAGHPRYPSLLSAYIDCRKVGAPSEVATLLE-EIGRERCAAASAG-------G 94
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
+ P ELD F+ Y +L +KE+L +
Sbjct: 95 EVVGMDP----ELDEFMETYCRLLERYKEELSR 123
>gi|164454387|dbj|BAF96740.1| knotted-like homeobox transcription factor MKN4 [Physcomitrella
patens]
Length = 495
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 18/157 (11%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
QL++ I HPLY +L+ AH+S ++ P L +D + + + Q ++
Sbjct: 218 QLLRDAIVDHPLYPELVVAHISIFKIGAPKGLLIKLD-------EMEKKFQRFQYGESSW 270
Query: 94 N--HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGV 151
N H + LD F+ Y+ +L F+E L+ A +++E+ L G
Sbjct: 271 NVLHVTKFGQDPSLDFFMRSYIDLLTKFREDLENPYNKFAQYKDKVTKDLED----LCGH 326
Query: 152 SLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFG 188
+ T D+ED+ D + D +DL G
Sbjct: 327 YI-----ETTPDEEDNFGSDIGTKDMSQDLNDLEILG 358
>gi|224122928|ref|XP_002318951.1| predicted protein [Populus trichocarpa]
gi|222857327|gb|EEE94874.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+IK +IA+HP Y L++A+V C +V P + + L++ S+ Q N
Sbjct: 11 VIKTQIANHPRYPDLVSAYVECRKVGAPPEMVSLLEDIGRCSY----------QINTCYE 60
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
P ELD F+ Y VL +KE+L + EA IE+ L +L +L
Sbjct: 61 IGADP----ELDEFMESYCEVLHRYKEELSKPFD----EATTFLSSIESQLSSLCKGTL 111
>gi|4099826|gb|AAD00691.1| homeobox transcription factor SKN1 [Picea mariana]
Length = 433
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 22/122 (18%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + + +DA + Y N
Sbjct: 173 IKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-------LTHEY------QNQQRR 219
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
++S ELD F+ Y +L + E+L + + EA+ +IE SLG+
Sbjct: 220 TVSIGMDPELDQFMEAYCEILTKYHEELAKPFK----EAMTFLMKIEAQFN-----SLGK 270
Query: 156 GT 157
GT
Sbjct: 271 GT 272
>gi|315307485|gb|ADU04146.1| hypothetical protein [Gossypium hirsutum]
Length = 161
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATP 62
+G D + I+A+IASHPLY +LL AH+ C ++ TP
Sbjct: 66 AGFEDDRVSSTAIRAKIASHPLYPKLLQAHIDCHKLGTP 104
>gi|85543294|gb|ABC71527.1| KNOTTED1 homeodomain protein [Cenchrus americanus]
Length = 321
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V+ IKA+I HP Y LLAA++ C +V P P + A+L L+
Sbjct: 97 VEAIKAKIIFHPHYYSLLAAYLECQKVGAP----PEVSARLTAMAQ------ELEARQRT 146
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
L ELD F+ Y +L F+E+ + ++ EA+ R +E+ L +L+
Sbjct: 147 ALGGLGAATEPELDQFMEAYHEMLVKFREEPTRPLQ----EAMEFMRRVESQLNSLS 199
>gi|2935575|gb|AAC32818.1| KNOX class homeodomain protein [Oryza sativa Indica Group]
Length = 357
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A + IKA+I +HP Y LLAA++ C +V P + L + A A+ L
Sbjct: 84 AAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAK----------LDAR 133
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ + P ELD F+ Y +L ++E+L + + EA+ + +E+ L +
Sbjct: 134 PPGRHDARDP----ELDQFMEAYCNMLAKYREELTRPID----EAMEFLKRVESQLDTI 184
>gi|194703086|gb|ACF85627.1| unknown [Zea mays]
gi|414871974|tpg|DAA50531.1| TPA: putative knotted-like transcription factor family protein [Zea
mays]
Length = 352
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 16/151 (10%)
Query: 22 DVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLR 81
D S + ++IKA+I SHPLY LL A + C +V P++ + + A LA
Sbjct: 71 DPSRQSNSDRGSEIIKAKIMSHPLYPALLRAFIDCRKVGAPLEIVGRLSA-LADD----- 124
Query: 82 SYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREI 141
+ N++ P + ELD F+ Y +L ++++L + ++ EA + +
Sbjct: 125 -----VETNSDGRQEEQPAD-PELDQFMEIYCHMLVRYRQELTRPIQ----EADEFFKSM 174
Query: 142 ENTLQALTGVSLGEGTGATMSDDEDDLHMDF 172
E + + + G G SD+++ +D
Sbjct: 175 EAQIDSFSLDDNGYEEGGGSSDEDEQETVDL 205
>gi|388517925|gb|AFK47024.1| unknown [Medicago truncatula]
Length = 316
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 27/147 (18%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRS- 82
+G D A+ ++KA+IASHP Y +LL A++ C +V P + L++ ++ R
Sbjct: 61 AGIQDDVAS-NIMKAKIASHPYYPRLLQAYIDCQKVGAPPEIASLLEEIRRENDMCKRDV 119
Query: 83 -----YGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMG 137
+G+ ELD F+ Y +L +K L + EA
Sbjct: 120 VVSTCFGA----------------DPELDEFMESYCDMLVKYKSDLTRPFD----EATTF 159
Query: 138 CREIENTLQALTGVSLGEGTGATMSDD 164
+IE L L + T SDD
Sbjct: 160 LNKIETQLSHLCTGGAAAASLPTASDD 186
>gi|356526781|ref|XP_003531995.1| PREDICTED: homeobox protein knotted-1-like 6-like [Glycine max]
Length = 317
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 29 QTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQ 88
Q LIKA+IASHP Y +LL A++ C +V P + L++ ++ + + V +
Sbjct: 70 QNDASSLIKAKIASHPHYPRLLQAYIDCQKVGAPPEIACLLE-EIRRENDVCK------- 121
Query: 89 ANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ S ELD F+ Y +L +K L + EA +IE L L
Sbjct: 122 --RDVVVSTCVEADPELDEFMETYCDMLVKYKSDLTRPFD----EATTFLNKIETQLTDL 175
Query: 149 -TGVSLGEGTGATMSDD 164
+G SL T+SDD
Sbjct: 176 CSGSSL-----LTLSDD 187
>gi|357485791|ref|XP_003613183.1| Knotted-1 homeobox protein [Medicago truncatula]
gi|355514518|gb|AES96141.1| Knotted-1 homeobox protein [Medicago truncatula]
Length = 316
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 27/147 (18%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRS- 82
+G D A+ ++KA+IASHP Y +LL A++ C +V P + L++ ++ R
Sbjct: 61 AGIQDDVAS-NIMKAKIASHPYYPRLLQAYIDCQKVGAPPEIASLLEEIRRENDMCKRDV 119
Query: 83 -----YGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMG 137
+G+ ELD F+ Y +L +K L + EA
Sbjct: 120 VVSTCFGA----------------DPELDEFMESYCDMLVKYKSDLTRPFD----EATTF 159
Query: 138 CREIENTLQALTGVSLGEGTGATMSDD 164
+IE L L + T SDD
Sbjct: 160 LNKIETQLSHLCTGGAAAASLPTASDD 186
>gi|145336056|ref|NP_173752.3| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
gi|332192259|gb|AEE30380.1| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
Length = 329
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 20/146 (13%)
Query: 26 HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLR--VATPIDQLPLIDAQLAQSHHVLRSY 83
+D ++ +IKA+IA HP Y +LL A++ C + V P + L++ ++ + V +
Sbjct: 75 RNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIACLLE-EIQRESDVYK-- 131
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIEN 143
Q+ ++ P ELD F+ Y +L +K L + EA +IE
Sbjct: 132 ---QEVVPSSCFGADP----ELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEM 180
Query: 144 TLQAL-TGVSLGEGT---GATMSDDE 165
L+ L TGV G G SD+E
Sbjct: 181 QLRNLCTGVESARGVSEDGVISSDEE 206
>gi|75138249|sp|Q75LX7.1|KNOS4_ORYSJ RecName: Full=Homeobox protein knotted-1-like 4; AltName:
Full=Homeobox protein OSH10
gi|40538935|gb|AAR87192.1| putative KNOTTED-1-like homeobox protein [Oryza sativa Japonica
Group]
gi|222625532|gb|EEE59664.1| hypothetical protein OsJ_12066 [Oryza sativa Japonica Group]
Length = 337
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 15/131 (11%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IKA+I SHPLY LL A + C +V P P + +L+ L S + ++
Sbjct: 62 IKAKIMSHPLYPALLRAFIDCQKVGAP----PEVVGRLSALAGELDSRAEDRYLQGQSSD 117
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
ELD F+ Y+ +L +++++L + ++ EA R +E + + T G
Sbjct: 118 P-------ELDEFMETYIDMLVSYRQELTRPIQ----EADQFFRNMEAQIDSFTLDDNGS 166
Query: 156 GTGATMSDDED 166
G + D+++
Sbjct: 167 EGGNSSEDEQE 177
>gi|1814234|gb|AAB41849.1| POTH1 [Solanum tuberosum]
Length = 345
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 19/137 (13%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+IKA+I SHP Y +LL A++ C +V P + L++ +R ++ N
Sbjct: 115 VIKAKIVSHPYYPKLLNAYIDCQKVGAPAGIVNLLEE--------IRQQTDFRKPNAT-- 164
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVR-----VHAVEAVMG--CREIENTLQA 147
S+ ELD F+ Y +L +K L + ++ +E +G C++ + + +
Sbjct: 165 -SICIGADPELDEFMETYCDILLKYKSDLSRPFDEATTFLNKIEMQLGNLCKD-DGGVSS 222
Query: 148 LTGVSLGEGTGATMSDD 164
+S GE + S+D
Sbjct: 223 DEELSCGEADASMRSED 239
>gi|224102455|ref|XP_002312684.1| predicted protein [Populus trichocarpa]
gi|222852504|gb|EEE90051.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
L+KA+IASHP Y +LL A++ C +V P Q+A+ +R L + + +
Sbjct: 68 LVKAKIASHPSYPRLLEAYIDCQKVGAP--------PQIARFLDEIRRENDLFKHDAVST 119
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL-TGVSL 153
+ + ELD F+ Y +L +K L++ EA +IE + + T S+
Sbjct: 120 YWGA---DPELDEFMETYCDLLVKYKSDLERPFD----EATTFLNKIEMQFRNICTAASI 172
Query: 154 GEGTGATMS 162
+G ++S
Sbjct: 173 RSVSGQSLS 181
>gi|380746851|gb|AFE48356.1| liguleless-like homeodomain protein [Cuscuta pentagona]
Length = 350
Score = 43.1 bits (100), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQ-SHHVLRSYGSLQQ 88
+++ ++KA+IA+HPLY L++A++ C +VA P P I L + S H + +
Sbjct: 83 SSSPDVVKAQIANHPLYPNLVSAYIQCTKVAAP----PQISTLLEEISQHPPAAATTTAT 138
Query: 89 ANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
A+ ELD F+ Y + +KE+L +
Sbjct: 139 ADEIAGDP-------ELDQFMESYCEAMYKYKEELSK 168
>gi|218193477|gb|EEC75904.1| hypothetical protein OsI_12972 [Oryza sativa Indica Group]
Length = 337
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IKA+I SHPLY LL A + C +V P P + +L+ L S + H
Sbjct: 62 IKAKIMSHPLYPALLRAFIDCQKVGAP----PEVVGRLSALAGELDS-------RAEDMH 110
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
ELD F+ Y+ +L +++++L + ++ EA R +E + + T G
Sbjct: 111 LQGQSSDPELDEFMETYIDMLVSYRQELTRPIQ----EADQFFRNMEAQIDSFTLDDNGS 166
Query: 156 GTGATMSDDED 166
G + D+++
Sbjct: 167 EGGNSSEDEQE 177
>gi|15991302|dbj|BAB69679.1| homeodomain transcription factor KNAT6 [Arabidopsis thaliana]
Length = 326
Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 20/146 (13%)
Query: 26 HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLR--VATPIDQLPLIDAQLAQSHHVLRSY 83
+D ++ +IKA+IA HP Y +LL A++ C + V P + L++ ++ + V +
Sbjct: 72 RNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIACLLE-EIQRESDVYK-- 128
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIEN 143
Q+ ++ P ELD F+ Y +L +K L + EA +IE
Sbjct: 129 ---QEVVPSSCFGADP----ELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEM 177
Query: 144 TLQAL-TGVSLGEGT---GATMSDDE 165
L+ L TGV G G SD+E
Sbjct: 178 QLRNLCTGVESARGVSEDGVISSDEE 203
>gi|254749396|dbj|BAH86594.1| class1 knotted-like homeobox [Selaginella uncinata]
Length = 302
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 25/158 (15%)
Query: 23 VSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQ-----LPLIDAQLAQSH 77
+ G D++ V IK+ I HP Y +L+ AH++C R+ + I +L H
Sbjct: 28 LGGSRDES--VNDIKSAIILHPQYRELVRAHLNCKRIIEAVQDSGETSADSIIGELIHKH 85
Query: 78 HVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMG 137
L + + + N ELD F+ Y+ VL + E L + A+
Sbjct: 86 --LLKFKPAKSSTVGN---------PELDQFMVAYVNVLNAWGEDLSKTF----YGAIEC 130
Query: 138 CREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLD 175
CRE+E Q L+ +S G DDED + M+ L+
Sbjct: 131 CREME---QELSNISPGTHDILPPPDDEDYMSMEGVLE 165
>gi|357115634|ref|XP_003559593.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
4-like [Brachypodium distachyon]
Length = 314
Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I SHPLY LL A + C +V P P + +L+ L+S N++
Sbjct: 69 MKAKIMSHPLYPALLRAFIDCQKVGAP----PEVVGRLSSLADDLKS---------NSDD 115
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVR 128
L ELD F+ Y ++L + ++L + ++
Sbjct: 116 VLEQPADPELDQFMETYCVMLVRYSQELTRQIQ 148
>gi|162459056|ref|NP_001105508.1| liguleless3 [Zea mays]
gi|4240539|gb|AAD13611.1| knotted class 1 homeodomain protein liguleless3 [Zea mays]
gi|323388555|gb|ADX60082.1| Homeobox HB transcription factor CDS [Zea mays]
gi|414877207|tpg|DAA54338.1| TPA: liguleless3 [Zea mays]
Length = 295
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 62/156 (39%), Gaps = 22/156 (14%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IASHP Y LL+A++ C +V P + + L + R + +
Sbjct: 38 TELMKAQIASHPRYPSLLSAYIECRKVGA----HPHVTSLLEEVSRERRPDAGAGEIGVD 93
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
ELD F+ Y VL +KE+L + EA I+ L L
Sbjct: 94 ----------PELDEFMDAYCRVLVRYKEELTRPFD----EAASFLSSIQAQLSDLCSGG 139
Query: 153 LGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFG 188
AT SDD M S D+ S D+ G
Sbjct: 140 SSPAATATHSDD----MMGSSEDEQCSGDTDVPDMG 171
>gi|357499175|ref|XP_003619876.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|355494891|gb|AES76094.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|357640294|gb|AET87096.1| fused compound leaf 1 [Medicago truncatula]
Length = 161
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 21 GDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVL 80
G V H Q +++K I++HPLYE L+ AH+ CL+V I L + + Q
Sbjct: 27 GGVHEHDHQEENDEILKTRISNHPLYELLVQAHLDCLKVGD-ISNLEIEKSDKKQ----- 80
Query: 81 RSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
+L++ N L + ELD F+ Y + L KE +++
Sbjct: 81 ----TLKKQN------LDMLSQSELDLFMEAYCLALSKLKEAMKE 115
>gi|357640310|gb|AET87104.1| fused compound leaf 1 [Vitis vinifera]
Length = 204
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 16/92 (17%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
+++K I+ HPLY L+ AH+ CL+V+ + L ++ S + +N
Sbjct: 87 KMLKRRISCHPLYGFLVEAHLDCLKVSLSLS---------------LCAHKS-DEKKRHN 130
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
SLS + + ELD+F+ Y L KE +++
Sbjct: 131 QPSLSMYSQSELDHFMEAYCTTLTKLKEAMEE 162
>gi|28564574|dbj|BAC57683.1| KNOX class homeodomain protein [Oryza sativa Japonica Group]
Length = 412
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A + IKA+I +HP Y LLAA++ C +V P + L + A A+ L
Sbjct: 85 AAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAK----------LDAR 134
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ + P ELD F+ Y +L ++E+L + + EA+ + +E+ L +
Sbjct: 135 PPGRHDARDP----ELDQFMEAYCNMLAKYREELTRPID----EAMEFLKRVESQLDTI 185
>gi|357640308|gb|AET87103.1| fused compound leaf 1 [Populus trichocarpa]
Length = 181
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVAT--PIDQLPLIDAQLAQSHHVLRSYGSLQ 87
TA + +K I+SHPLY L+ H+ CL+V T +D++P + L+ + SL
Sbjct: 20 TAEAEALKKRISSHPLYGLLVQTHIDCLKVGTVGDVDRIPRVRPNLSCQ---FPNPSSLS 76
Query: 88 QANNNN---NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
Q ++ +H+L P+ + + + + Y L KE +++
Sbjct: 77 QPELDSFMVSHTL-PYNKSLVKSNMEAYCFALSKLKEAMEE 116
>gi|371767708|gb|AEX56209.1| knotted-like 4 protein [Dactylorhiza fuchsii]
Length = 279
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA IASHP Y LL A++ C +V P D ++D + R + ++ N
Sbjct: 40 MKARIASHPRYPHLLEAYIDCQKVGAPPDIASVLD-------EIRREKAADKRGAAPN-- 90
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
L ELD F+ Y VL ++ L Q
Sbjct: 91 -LILGADPELDEFMEMYCDVLVKYRRDLAQ 119
>gi|108710348|gb|ABF98143.1| Homeobox protein OSH1, putative [Oryza sativa Japonica Group]
gi|125545214|gb|EAY91353.1| hypothetical protein OsI_12973 [Oryza sativa Indica Group]
gi|357640298|gb|AET87098.1| fused compound leaf 2 [Oryza sativa]
Length = 194
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+IKA+I SHPLY LL A V C +V P P + +L+ V Q + +
Sbjct: 70 MIKAKIMSHPLYPSLLRAFVDCKKVGAP----PEVVGRLSSLAVVT---DVPQYSGDRCL 122
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ P ELD F+ Y +L + ++L + ++ EA R IE + +L
Sbjct: 123 PAQQPAADPELDQFMETYCYMLTRYGQELARPIQ----EAEEFFRGIEEQIDSL 172
>gi|127709419|gb|ABO28750.1| knotted1-like homeobox transcription factor [Prunus persica]
gi|289655992|gb|ADD14044.1| class 1 KNOTTED-like transcription factor KNOPE2 [Prunus persica]
Length = 351
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 13/134 (9%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IKA+IASHP Y +L+ A++ C +V P + +D +S Y QQ + N
Sbjct: 96 IKAKIASHPTYPRLIHAYIECQKVGAPPEIASFLDEIRRESDF----YNYKQQQRGSCNS 151
Query: 96 SLSPHER-----QELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTG 150
+ S ELD F+ Y +L +K L + EA +IE L L
Sbjct: 152 NSSMSSTYLGADPELDEFMETYCEMLVKYKSDLSRPFD----EATTFLNKIELQLSNLCT 207
Query: 151 VSLGEGTGATMSDD 164
S + T+SD+
Sbjct: 208 SSANASSIRTLSDE 221
>gi|351734506|ref|NP_001237352.1| KNT1 [Glycine max]
gi|114150002|gb|ABI51619.1| KNT1 [Glycine max]
Length = 362
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+V+C +V P + + ++ A S V+ + G
Sbjct: 109 VKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVGRLEEACA-SAAVIMAGG----------- 156
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
+ S E LD F+ Y +L ++++L + + EA++ + IE ++LT S +
Sbjct: 157 TASIGEDPALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLQRIECQFKSLTISSSLD 212
Query: 156 GTGATMSDDED 166
T + D +
Sbjct: 213 TTACNEAIDRN 223
>gi|449447321|ref|XP_004141417.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
Length = 335
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 61/116 (52%), Gaps = 14/116 (12%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+ IKA+I +HP Y LL A++ C +V P P + +L + + + + Q+++
Sbjct: 63 FEAIKAKILAHPQYSSLLEAYMECQKVGAP----PQVVERLVAAR---QEFEARQRSSMV 115
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ ++ + ELD F+ Y +L ++E+L + ++ EA+ R IE+ L +L
Sbjct: 116 SGETI---KDPELDQFMEAYYDMLVKYREELSRPIQ----EAMDFMRRIESQLTSL 164
>gi|297850804|ref|XP_002893283.1| hypothetical protein ARALYDRAFT_472599 [Arabidopsis lyrata subsp.
lyrata]
gi|297339125|gb|EFH69542.1| hypothetical protein ARALYDRAFT_472599 [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 20/146 (13%)
Query: 26 HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLR--VATPIDQLPLIDAQLAQSHHVLRSY 83
+D ++ +IK +IA HP Y +LL A++ C + V P + L++ ++ + V +
Sbjct: 75 RNDDNVSLSVIKTKIACHPSYPRLLQAYIDCQKKQVGAPPEIACLLE-EIQRESDVYK-- 131
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIEN 143
Q+ + P ELD F+ Y +L +K L + EA +IE
Sbjct: 132 ---QEVVPSYCFGADP----ELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEM 180
Query: 144 TLQAL-TGVSLGEGT---GATMSDDE 165
L+ L TGV G GA SD+E
Sbjct: 181 QLRNLCTGVESARGVSEDGAISSDEE 206
>gi|75226461|sp|Q75LX9.1|KNOS5_ORYSJ RecName: Full=Putative homeobox protein knotted-1-like 5
gi|40538948|gb|AAR87205.1| putative KNOX class homeodomain protein [Oryza sativa Japonica
Group]
Length = 337
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+IKA+I SHPLY LL A V C +V P P + +L+ V Q + +
Sbjct: 70 MIKAKIMSHPLYPSLLRAFVDCKKVGAP----PEVVGRLSSLAVVT---DVPQYSGDRCL 122
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ P ELD F+ Y +L + ++L + ++ EA R IE + +L
Sbjct: 123 PAQQPAADPELDQFMETYCYMLTRYGQELARPIQ----EAEEFFRGIEEQIDSL 172
>gi|329757145|gb|AEC04752.1| knotted-like homeobox KNOX3 [Fragaria vesca]
Length = 360
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLP-LIDAQLAQSHHVLRSYGSLQQANNNNN 94
+K ++ SHPL+ +LLA++V+C +V P + + L DA A + +++ +
Sbjct: 93 MKTKVMSHPLFPRLLASYVNCQKVGAPAEVVARLEDAAAASISSSAALSAACEESEPD-- 150
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT----- 149
ELD F+ Y +L + E+L + EA++G +I + L+AL+
Sbjct: 151 --------PELDQFMEAYCEMLTKYHEELTKPFH----EAMLGLSKINSQLKALSVSPSY 198
Query: 150 GVSLGEGTGATMSDDEDDLHMDFSLDQSASD 180
S G+ G S +E ++ + +D A D
Sbjct: 199 SASTGDLVGQGGSSEEAGVNEN-CIDPRAKD 228
>gi|449529644|ref|XP_004171808.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
2-like [Cucumis sativus]
Length = 397
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 23/133 (17%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVL-RSYGSLQQANNNNN 94
IKA+I SH L+ +L A + C V P P + A+L R S+ A +
Sbjct: 132 IKAKILSHSLFSNILQAFLDCQNVGAP----PEVAAKLTSVREEFERQRSSMATAEGS-- 185
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL- 153
S+ P ELD F+ Y +L ++E+L++ ++ EAV IE+ L L S
Sbjct: 186 -SIDP----ELDQFMEAYYGMLVKYREELRRPIQ----EAVDFMHRIESQLNTLCNGSFQ 236
Query: 154 ------GEGTGAT 160
EG G++
Sbjct: 237 ILPSGKSEGMGSS 249
>gi|55669483|gb|AAV54609.1| homeobox transcription factor KN2 [Pinus strobus]
Length = 244
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + +DA + R Y N +
Sbjct: 169 IKSKILAHPQYPSLLGAYIDCQKIGAPPEVAARLDA-------LTREY-----ENQQHRS 216
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQL 123
+LS ELD F+ Y +L + E+L
Sbjct: 217 TLSIGMDPELDQFMEAYCEMLTKYHEEL 244
>gi|449467124|ref|XP_004151275.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
Length = 397
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 23/133 (17%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVL-RSYGSLQQANNNNN 94
IKA+I SH L+ +L A + C V P P + A+L R S+ A +
Sbjct: 132 IKAKILSHSLFSNILQAFLDCQNVGAP----PEVAAKLTSVREEFERQRSSMATAEGS-- 185
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL- 153
S+ P ELD F+ Y +L ++E+L++ ++ EAV IE+ L L S
Sbjct: 186 -SIDP----ELDQFMEAYYGMLVKYREELRRPIQ----EAVDFMHRIESQLNTLCNGSFQ 236
Query: 154 ------GEGTGAT 160
EG G++
Sbjct: 237 ILPSGKSEGMGSS 249
>gi|307335624|gb|ADN43389.1| KNOX2 [Agave tequilana]
Length = 291
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA IASHP Y LL A++ C +V P + L+D + + V+ + A +
Sbjct: 36 LKARIASHPRYPLLLQAYIDCQKVGAPPEIACLLDEITSSNGAVVNKRTA--AAAFSGRF 93
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHV 127
P ELD+F+ +Y VL ++ L + +
Sbjct: 94 GSDP----ELDDFMERYCDVLMKYRSDLARSI 121
>gi|413933450|gb|AFW68001.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 328
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
++IKA+I SHPLY +L A + C +V P P I +L+ + + N+++
Sbjct: 57 EIIKAKIMSHPLYPAVLRAFIDCRKVGAP----PEIVGRLS-------ALADDVEMNSDD 105
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
ELD F+ Y +L ++++L + ++ EA R +E + A + +
Sbjct: 106 KQEQRRAADPELDQFMEIYCHMLVRYRQELTRPIQ----EADEFFRSMEAQIDAFSLLDD 161
Query: 154 G--EGTGATMSDDED 166
EG G++ D+++
Sbjct: 162 NGYEGCGSSDEDEQE 176
>gi|356506913|ref|XP_003522218.1| PREDICTED: homeobox protein knotted-1-like 2-like isoform 1
[Glycine max]
Length = 361
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 19/133 (14%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
++ IKA+I HP Y LL ++ C +V P P + A+ A V ++ + Q++
Sbjct: 98 LEAIKAKIIDHPHYSNLLQVYMDCQKVGAP----PEVAARFAT---VKENFEARQRSLVR 150
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
S+ + ELD F+ Y +L ++E+L + + EA + IE+ L L
Sbjct: 151 ---SMETCKDPELDQFMEAYYDMLVKYREELTRPIE----EAKDFMQRIESQLNTLCN-- 201
Query: 153 LGEGTGATMSDDE 165
GT SDD+
Sbjct: 202 ---GTVRIFSDDK 211
>gi|125525555|gb|EAY73669.1| hypothetical protein OsI_01553 [Oryza sativa Indica Group]
Length = 169
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
+L+KA+IA HP Y LL+A++ C +V P + L++ + R +
Sbjct: 41 ELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLLE-------EIGRERRAGGGGGGAG 93
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
+ P ELD F+ Y VL +KE+L +
Sbjct: 94 QIGVDP----ELDEFMEAYCRVLVRYKEELSR 121
>gi|110340603|gb|ABG67974.1| STM protein [Kalanchoe daigremontiana]
Length = 249
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 25/146 (17%)
Query: 42 SHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHE 101
SHP Y +L+AA+V+C +V P + + ++ A + G L E
Sbjct: 2 SHPHYHRLVAAYVNCQKVGAPPEVVEKLERACAGLSSITTGSGRL-------------GE 48
Query: 102 RQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT------GVSLGE 155
LD F+ Y +L ++ +L + + EA+ IE+ +ALT + G+
Sbjct: 49 DPGLDQFMEAYCEMLTKYELELSKPFK----EAMAFLSRIESQFKALTLSSSSDSPAYGQ 104
Query: 156 GTGATMSDDED-DLHMDFSLDQSASD 180
+ S DED D+H D +D A D
Sbjct: 105 SSDGNGSSDEDVDVHNDL-IDPQAED 129
>gi|449526764|ref|XP_004170383.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
Length = 369
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 61/116 (52%), Gaps = 14/116 (12%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+ IKA+I +HP Y LL A++ C +V P P + +L + + + + Q+++
Sbjct: 106 FEAIKAKILAHPQYSSLLEAYMECQKVGAP----PQVVERLVAAR---QEFEARQRSSMV 158
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ ++ + ELD F+ Y +L ++E+L + ++ EA+ R IE+ L +L
Sbjct: 159 SGETI---KDPELDQFMEAYYDMLVKYREELSRPIQ----EAMDFMRRIESQLTSL 207
>gi|55669507|gb|AAV54621.1| homeobox transcription factor KN4 [Picea mariana]
Length = 438
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 16/118 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 184 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 237
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ + P ELD F+ Y +L + +L + + EA ++E L L+
Sbjct: 238 --DIGVDP----ELDQFMEAYCQMLIKYHLELSKPFK----EARTFLNKMETQLNCLS 285
>gi|82909178|gb|ABB93759.1| homeobox transcription factor KN2 [Picea mariana]
Length = 248
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H ++IKA+I +HP Y LL A++ C ++ P + + +DA + Y
Sbjct: 161 SSHFSGGNEAEVIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-------LTHEY 213
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
+ QQ + + P ELD F+ Y +L + E+L
Sbjct: 214 EN-QQHRTTVSIGMDP----ELDQFMEAYCEMLTKYHEEL 248
>gi|357640304|gb|AET87101.1| fused compound leaf 1 [Lotus japonicus]
Length = 150
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 18/92 (19%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLA--QSHHVLRSYGSLQQANNNN 93
+K I+SHPLYE L+ AH+ CL+V + +D +L Q +++ +Q +
Sbjct: 27 LKRRISSHPLYELLVEAHLDCLKVG----DISKLDRELKKEQKQAIMK-----KQNSGMF 77
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
NHS ELD F+ Y + L KE +++
Sbjct: 78 NHS-------ELDLFMEAYCLALNKLKEAIEE 102
>gi|66865825|gb|AAY57561.1| liguleless 3 [Zea mays]
Length = 216
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 18/132 (13%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IASHP Y LL+A++ C +V P + + L + R + +
Sbjct: 25 TELMKAQIASHPRYPSLLSAYIECRKVGA----HPHVTSLLEEVSRERRPDAGAGEIGVD 80
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
ELD F+ Y VL +KE+L + EA I+ L L
Sbjct: 81 ----------PELDEFMDAYCRVLVRYKEELTRPFD----EAASFLSSIQAQLSDLCSGG 126
Query: 153 LGEGTGATMSDD 164
AT SDD
Sbjct: 127 SSPAATATHSDD 138
>gi|82908530|gb|ABB93454.1| homeobox transcription factor KN4 [Picea abies]
Length = 260
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IASHP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 184 SIDTLKTKIASHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 237
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 238 --DIGVDP----ELDQFMEAYCQMLIKY 259
>gi|125570066|gb|EAZ11581.1| hypothetical protein OsJ_01445 [Oryza sativa Japonica Group]
Length = 169
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
+L+KA+IA HP Y LL+A++ C +V P + L+ + R +
Sbjct: 41 ELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLLK-------EIGRERRAGGGGGGAG 93
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
+ P ELD F+ Y VL +KE+L +
Sbjct: 94 QIGVDP----ELDEFMEAYCRVLVRYKEELSR 121
>gi|357640306|gb|AET87102.1| fused compound leaf 1 [Zea mays]
Length = 163
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
++IKA+I SHPLY +L A + C +V P P I +L+ + + N+++
Sbjct: 57 EIIKAKIMSHPLYPAVLRAFIDCRKVGAP----PEIVGRLS-------ALADDVEMNSDD 105
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
ELD F+ Y +L ++++L + ++ EA R +E + A +
Sbjct: 106 KQEQRRAADPELDQFMEIYCHMLVRYRQELTRPIQ----EADEFFRSMEAQIDAFS 157
>gi|82908180|gb|ABB93279.1| homeobox transcription factor KN2 [Picea abies]
Length = 248
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA+I +HP Y LL A++ C ++ P + + +DA + Y
Sbjct: 161 SSHFSGGKEAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-------LTHEY 213
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
+ QQ + + P ELD F+ Y +L + E+L
Sbjct: 214 EN-QQHRTTVSIGMDP----ELDQFMEAYCEMLTKYHEEL 248
>gi|82908216|gb|ABB93297.1| homeobox transcription factor KN2 [Picea abies]
Length = 248
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA+I +HP Y LL A++ C ++ P + + +D VL +
Sbjct: 161 SSHFSGGNEAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLD--------VLTNE 212
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
QQ + + P ELD F+ Y +L + E+L
Sbjct: 213 YENQQHRTTVSIGMDP----ELDQFMEAYCEMLTKYHEEL 248
>gi|413916170|gb|AFW56102.1| hypothetical protein ZEAMMB73_314479 [Zea mays]
Length = 182
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 22/121 (18%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
++ IKA+I SHP Y LLAA++ +V P P + A+L + + Q
Sbjct: 38 IEAIKAKIISHPHYYSLLAAYLEYNKVGAP----PEVSARLTE----------IAQEVET 83
Query: 93 NNH----SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
H L+ ELD F+ Y +L F+E+L + ++ EA+ R +E+ L +L
Sbjct: 84 RQHMALGGLAATTEPELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSL 139
Query: 149 T 149
+
Sbjct: 140 S 140
>gi|13021921|gb|AAK11581.1|AF323786_1 KNOX class homeodomain protein [Oryza sativa Indica Group]
Length = 204
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 18/116 (15%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A + IKA+I +HP Y LLAA++ C +V P + L + A A+ L
Sbjct: 84 AAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAK----------LDAR 133
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTL 145
+ + P ELD F+ Y +L ++E+L + + EA+ + +E+ L
Sbjct: 134 PPGRHDARDP----ELDQFMEAYCNMLAKYREELTRPID----EAMEFLKRVESQL 181
>gi|82908162|gb|ABB93270.1| homeobox transcription factor KN2 [Picea abies]
gi|82908170|gb|ABB93274.1| homeobox transcription factor KN2 [Picea abies]
gi|82908184|gb|ABB93281.1| homeobox transcription factor KN2 [Picea abies]
gi|82908224|gb|ABB93301.1| homeobox transcription factor KN2 [Picea abies]
gi|82908226|gb|ABB93302.1| homeobox transcription factor KN2 [Picea abies]
Length = 248
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA+I +HP Y LL A++ C ++ P + + +DA L +
Sbjct: 161 SSHFSGGNEAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA--------LSNE 212
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
QQ + + P ELD F+ Y +L + E+L
Sbjct: 213 YENQQHRTTVSIGMDP----ELDQFMEAYCEMLTKYHEEL 248
>gi|222625535|gb|EEE59667.1| hypothetical protein OsJ_12069 [Oryza sativa Japonica Group]
Length = 353
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+IKA+I SHPLY LL A V C +V P P + +L+ V Q + +
Sbjct: 70 MIKAKIMSHPLYPSLLRAFVDCKKVGAP----PEVVGRLSSLAVVT---DVPQYSGDRCL 122
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ P ELD F+ Y +L + ++L + ++ EA R IE + +L
Sbjct: 123 PAQQPAADPELDQFMETYCYMLTRYGQELARPIQ----EAEEFFRGIEEQIDSL 172
>gi|82908152|gb|ABB93265.1| homeobox transcription factor KN2 [Picea abies]
gi|82908154|gb|ABB93266.1| homeobox transcription factor KN2 [Picea abies]
gi|82908156|gb|ABB93267.1| homeobox transcription factor KN2 [Picea abies]
gi|82908158|gb|ABB93268.1| homeobox transcription factor KN2 [Picea abies]
gi|82908160|gb|ABB93269.1| homeobox transcription factor KN2 [Picea abies]
gi|82908164|gb|ABB93271.1| homeobox transcription factor KN2 [Picea abies]
gi|82908166|gb|ABB93272.1| homeobox transcription factor KN2 [Picea abies]
gi|82908168|gb|ABB93273.1| homeobox transcription factor KN2 [Picea abies]
gi|82908172|gb|ABB93275.1| homeobox transcription factor KN2 [Picea abies]
gi|82908176|gb|ABB93277.1| homeobox transcription factor KN2 [Picea abies]
gi|82908178|gb|ABB93278.1| homeobox transcription factor KN2 [Picea abies]
gi|82908186|gb|ABB93282.1| homeobox transcription factor KN2 [Picea abies]
gi|82908188|gb|ABB93283.1| homeobox transcription factor KN2 [Picea abies]
gi|82908192|gb|ABB93285.1| homeobox transcription factor KN2 [Picea abies]
gi|82908194|gb|ABB93286.1| homeobox transcription factor KN2 [Picea abies]
gi|82908200|gb|ABB93289.1| homeobox transcription factor KN2 [Picea abies]
gi|82908202|gb|ABB93290.1| homeobox transcription factor KN2 [Picea abies]
gi|82908208|gb|ABB93293.1| homeobox transcription factor KN2 [Picea abies]
gi|82908210|gb|ABB93294.1| homeobox transcription factor KN2 [Picea abies]
gi|82908214|gb|ABB93296.1| homeobox transcription factor KN2 [Picea abies]
gi|82908222|gb|ABB93300.1| homeobox transcription factor KN2 [Picea abies]
gi|82908230|gb|ABB93304.1| homeobox transcription factor KN2 [Picea abies]
gi|82908234|gb|ABB93306.1| homeobox transcription factor KN2 [Picea abies]
gi|82908236|gb|ABB93307.1| homeobox transcription factor KN2 [Picea abies]
gi|82908238|gb|ABB93308.1| homeobox transcription factor KN2 [Picea abies]
gi|82908240|gb|ABB93309.1| homeobox transcription factor KN2 [Picea abies]
gi|82908242|gb|ABB93310.1| homeobox transcription factor KN2 [Picea abies]
gi|82911152|gb|ABB94721.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911156|gb|ABB94723.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911166|gb|ABB94728.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911172|gb|ABB94731.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911174|gb|ABB94732.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911182|gb|ABB94736.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911186|gb|ABB94738.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911192|gb|ABB94741.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911194|gb|ABB94742.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911220|gb|ABB94755.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911234|gb|ABB94762.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911240|gb|ABB94765.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911242|gb|ABB94766.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911244|gb|ABB94767.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911248|gb|ABB94769.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911250|gb|ABB94770.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911254|gb|ABB94772.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911256|gb|ABB94773.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911258|gb|ABB94774.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911264|gb|ABB94777.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911266|gb|ABB94778.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911276|gb|ABB94783.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911280|gb|ABB94785.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911284|gb|ABB94787.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911296|gb|ABB94793.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911298|gb|ABB94794.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911300|gb|ABB94795.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911302|gb|ABB94796.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911306|gb|ABB94798.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911312|gb|ABB94801.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911324|gb|ABB94807.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911326|gb|ABB94808.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911340|gb|ABB94815.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911342|gb|ABB94816.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911352|gb|ABB94821.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911354|gb|ABB94822.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911358|gb|ABB94824.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911362|gb|ABB94826.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911372|gb|ABB94831.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911380|gb|ABB94835.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911412|gb|ABB94851.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911414|gb|ABB94852.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911428|gb|ABB94859.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911430|gb|ABB94860.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911440|gb|ABB94865.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911454|gb|ABB94872.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911466|gb|ABB94878.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911470|gb|ABB94880.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911474|gb|ABB94882.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911476|gb|ABB94883.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911482|gb|ABB94886.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911484|gb|ABB94887.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911488|gb|ABB94889.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911492|gb|ABB94891.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911502|gb|ABB94896.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA+I +HP Y LL A++ C ++ P + + +DA L +
Sbjct: 161 SSHFSGGNEAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA--------LTNE 212
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
QQ + + P ELD F+ Y +L + E+L
Sbjct: 213 YENQQHRTTVSIGMDP----ELDQFMEAYCEMLTKYHEEL 248
>gi|82911392|gb|ABB94841.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA+I +HP Y LL A++ C ++ P + + +DA L +
Sbjct: 161 SSHFSGGNEAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA--------LTNE 212
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
QQ + + P ELD F+ Y +L + E+L
Sbjct: 213 YENQQHRTTVSIGMDP----ELDQFMEAYCEMLTKYHEEL 248
>gi|162461591|ref|NP_001105331.1| homeobox protein rough sheath 1 [Zea mays]
gi|3024577|sp|Q41853.1|RSH1_MAIZE RecName: Full=Homeobox protein rough sheath 1
gi|1008879|gb|AAA86287.1| RS1 [Zea mays]
Length = 351
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 20/132 (15%)
Query: 42 SHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHE 101
+HP Y LLAA++ C +V P D L + A A+ L + + P
Sbjct: 96 AHPQYSALLAAYLDCQKVGAPPDVLERLTAMAAK----------LDASAAGRHEPRDP-- 143
Query: 102 RQELDNFLAQYLIVLCTFKEQLQQHVR-----VHAVEAVMGCREIENTLQALTGVSLGEG 156
ELD F+ Y +L ++E+L + + + VEA + C + +SL +G
Sbjct: 144 --ELDQFMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGG-SSSARLSLADG 200
Query: 157 TGATMSDDEDDL 168
+ EDD+
Sbjct: 201 KSEGVGSSEDDM 212
>gi|3046821|dbj|BAA25546.1| NTH15 [Nicotiana tabacum]
Length = 342
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 25/147 (17%)
Query: 42 SHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHE 101
+HP Y +LL+A+V+C ++ P + + ++ A S + R+ G + E
Sbjct: 93 AHPHYPRLLSAYVNCQKIGAPPEVVARLEEVCATSATIGRNSGGII------------GE 140
Query: 102 RQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGAT- 160
LD F+ Y +L ++++L + + EA++ IE +ALT S E A
Sbjct: 141 DPALDQFMEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALTLTSSSESVAALG 196
Query: 161 -------MSDDEDDLHMDFSLDQSASD 180
S++E D++ F +D A D
Sbjct: 197 EAIDRNGSSEEEVDVNNGF-IDPQAED 222
>gi|7581979|emb|CAB88029.1| knotted1-like homeobox protein [Dendrobium grex Madame Thong-In]
Length = 286
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 32/138 (23%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLID---------AQLAQSHHVLRSYGSL 86
+KA IASHP Y LL A++ C +V P D L++ +LA S +L S
Sbjct: 41 MKARIASHPRYPHLLEAYIDCQKVGAPPDIASLLEEIRRENAGGERLASSSVILGS---- 96
Query: 87 QQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQ 146
ELD F+ Y VL ++ L++ EA +E L
Sbjct: 97 ---------------DPELDEFMEMYCDVLVKYRRDLERPFD----EATAFLNTMEVQLS 137
Query: 147 ALTGVSLGEGTGATMSDD 164
L + G +SD+
Sbjct: 138 DLCKPTCRAALGPYVSDE 155
>gi|82911252|gb|ABB94771.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911452|gb|ABB94871.1| homeobox transcription factor KN2 [Picea glauca]
Length = 247
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 13/100 (13%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA+I +HP Y LL A++ C ++ P + + +DA + + R+
Sbjct: 161 SSHFSGGNEAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTNEYENQHRTT 220
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
S+ + P ELD F+ Y +L + E+L
Sbjct: 221 VSI---------GMDP----ELDQFMEAYCEMLTKYHEEL 247
>gi|295149266|gb|ADF81046.1| KNOTTED-like homebox protein 1 [Cocos nucifera]
Length = 333
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+IKA+I +HP Y +LL+A+V+C +V P + + ++ A S ++ S A +
Sbjct: 68 IIKAKIMAHPQYPRLLSAYVNCHKVGAPPEVVARLEEACATS--LMMGRASSSAAAGDGG 125
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
E LD F+ Y +L ++++L + + EA++ I+ ++L+
Sbjct: 126 SGGGGGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRIDAQFKSLS 176
>gi|13021918|gb|AAK11580.1|AF323785_1 KNOX class homeodomain protein [Oryza sativa Indica Group]
Length = 164
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IA HP Y LL+A++ C +V P + L++ + A
Sbjct: 52 TELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRG------GGGGATAG 105
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
L P ELD F+ Y VL +KE+L +
Sbjct: 106 GEIGLDP----ELDEFMETYCRVLERYKEELTR 134
>gi|350535222|ref|NP_001233927.1| knotted 3 protein [Solanum lycopersicum]
gi|4098242|gb|AAD00252.1| knotted 3 protein [Solanum lycopersicum]
Length = 320
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+IKA+I SHP Y +LL A++ C +V P + L++ +R ++ N
Sbjct: 89 IIKAKILSHPYYPKLLNAYIDCQKVGAPASIVNLLEE--------IRQQNDFRKPNAT-- 138
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
L ELD F+ Y +L +K L +
Sbjct: 139 -CLCIGADPELDEFMETYCDILLKYKSDLSR 168
>gi|55669485|gb|AAV54610.1| homeobox transcription factor KN2 [Picea glauca]
gi|82908174|gb|ABB93276.1| homeobox transcription factor KN2 [Picea abies]
gi|82908182|gb|ABB93280.1| homeobox transcription factor KN2 [Picea abies]
gi|82908190|gb|ABB93284.1| homeobox transcription factor KN2 [Picea abies]
gi|82908196|gb|ABB93287.1| homeobox transcription factor KN2 [Picea abies]
gi|82908198|gb|ABB93288.1| homeobox transcription factor KN2 [Picea abies]
gi|82908204|gb|ABB93291.1| homeobox transcription factor KN2 [Picea abies]
gi|82908206|gb|ABB93292.1| homeobox transcription factor KN2 [Picea abies]
gi|82908212|gb|ABB93295.1| homeobox transcription factor KN2 [Picea abies]
gi|82908218|gb|ABB93298.1| homeobox transcription factor KN2 [Picea abies]
gi|82908220|gb|ABB93299.1| homeobox transcription factor KN2 [Picea abies]
gi|82908228|gb|ABB93303.1| homeobox transcription factor KN2 [Picea abies]
gi|82908232|gb|ABB93305.1| homeobox transcription factor KN2 [Picea abies]
gi|82909158|gb|ABB93749.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909160|gb|ABB93750.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909162|gb|ABB93751.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909164|gb|ABB93752.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909166|gb|ABB93753.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909168|gb|ABB93754.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909170|gb|ABB93755.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909172|gb|ABB93756.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909174|gb|ABB93757.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909176|gb|ABB93758.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909180|gb|ABB93760.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909182|gb|ABB93761.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909184|gb|ABB93762.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909186|gb|ABB93763.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909188|gb|ABB93764.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909190|gb|ABB93765.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909192|gb|ABB93766.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909194|gb|ABB93767.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909196|gb|ABB93768.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909198|gb|ABB93769.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909200|gb|ABB93770.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909202|gb|ABB93771.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909204|gb|ABB93772.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909206|gb|ABB93773.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909208|gb|ABB93774.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909210|gb|ABB93775.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909212|gb|ABB93776.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909214|gb|ABB93777.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909216|gb|ABB93778.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909218|gb|ABB93779.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909220|gb|ABB93780.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909224|gb|ABB93782.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909226|gb|ABB93783.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909228|gb|ABB93784.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909230|gb|ABB93785.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909232|gb|ABB93786.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909234|gb|ABB93787.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909236|gb|ABB93788.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909238|gb|ABB93789.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909240|gb|ABB93790.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909242|gb|ABB93791.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909244|gb|ABB93792.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909246|gb|ABB93793.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909248|gb|ABB93794.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909250|gb|ABB93795.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909252|gb|ABB93796.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909254|gb|ABB93797.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909256|gb|ABB93798.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909258|gb|ABB93799.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909260|gb|ABB93800.1| homeobox transcription factor KN2 [Picea mariana]
gi|82911120|gb|ABB94705.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911122|gb|ABB94706.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911124|gb|ABB94707.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911126|gb|ABB94708.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911128|gb|ABB94709.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911130|gb|ABB94710.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911132|gb|ABB94711.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911134|gb|ABB94712.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911138|gb|ABB94714.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911140|gb|ABB94715.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911142|gb|ABB94716.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911144|gb|ABB94717.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911146|gb|ABB94718.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911148|gb|ABB94719.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911150|gb|ABB94720.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911154|gb|ABB94722.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911158|gb|ABB94724.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911160|gb|ABB94725.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911162|gb|ABB94726.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911164|gb|ABB94727.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911168|gb|ABB94729.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911170|gb|ABB94730.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911176|gb|ABB94733.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911180|gb|ABB94735.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911184|gb|ABB94737.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911188|gb|ABB94739.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911190|gb|ABB94740.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911196|gb|ABB94743.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911198|gb|ABB94744.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911200|gb|ABB94745.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911204|gb|ABB94747.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911206|gb|ABB94748.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911208|gb|ABB94749.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911210|gb|ABB94750.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911212|gb|ABB94751.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911214|gb|ABB94752.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911216|gb|ABB94753.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911218|gb|ABB94754.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911222|gb|ABB94756.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911224|gb|ABB94757.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911226|gb|ABB94758.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911228|gb|ABB94759.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911230|gb|ABB94760.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911232|gb|ABB94761.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911236|gb|ABB94763.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911238|gb|ABB94764.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911246|gb|ABB94768.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911260|gb|ABB94775.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911262|gb|ABB94776.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911268|gb|ABB94779.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911270|gb|ABB94780.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911272|gb|ABB94781.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911274|gb|ABB94782.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911278|gb|ABB94784.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911282|gb|ABB94786.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911286|gb|ABB94788.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911288|gb|ABB94789.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911290|gb|ABB94790.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911292|gb|ABB94791.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911294|gb|ABB94792.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911304|gb|ABB94797.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911308|gb|ABB94799.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911310|gb|ABB94800.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911314|gb|ABB94802.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911316|gb|ABB94803.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911318|gb|ABB94804.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911320|gb|ABB94805.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911322|gb|ABB94806.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911328|gb|ABB94809.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911330|gb|ABB94810.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911332|gb|ABB94811.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911336|gb|ABB94813.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911338|gb|ABB94814.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911344|gb|ABB94817.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911346|gb|ABB94818.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911348|gb|ABB94819.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911356|gb|ABB94823.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911360|gb|ABB94825.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911364|gb|ABB94827.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911366|gb|ABB94828.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911368|gb|ABB94829.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911370|gb|ABB94830.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911374|gb|ABB94832.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911376|gb|ABB94833.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911382|gb|ABB94836.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911384|gb|ABB94837.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911386|gb|ABB94838.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911388|gb|ABB94839.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911390|gb|ABB94840.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911394|gb|ABB94842.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911396|gb|ABB94843.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911398|gb|ABB94844.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911400|gb|ABB94845.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911402|gb|ABB94846.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911404|gb|ABB94847.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911406|gb|ABB94848.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911408|gb|ABB94849.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911410|gb|ABB94850.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911418|gb|ABB94854.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911420|gb|ABB94855.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911422|gb|ABB94856.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911424|gb|ABB94857.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911426|gb|ABB94858.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911432|gb|ABB94861.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911434|gb|ABB94862.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911436|gb|ABB94863.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911438|gb|ABB94864.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911442|gb|ABB94866.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911444|gb|ABB94867.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911446|gb|ABB94868.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911450|gb|ABB94870.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911456|gb|ABB94873.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911458|gb|ABB94874.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911460|gb|ABB94875.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911462|gb|ABB94876.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911464|gb|ABB94877.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911472|gb|ABB94881.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911478|gb|ABB94884.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911480|gb|ABB94885.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911486|gb|ABB94888.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911490|gb|ABB94890.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911494|gb|ABB94892.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911498|gb|ABB94894.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911500|gb|ABB94895.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA+I +HP Y LL A++ C ++ P + + +DA + Y
Sbjct: 161 SSHFSGGNEAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-------LTHEY 213
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
+ QQ + + P ELD F+ Y +L + E+L
Sbjct: 214 EN-QQHRTTVSIGMDP----ELDQFMEAYCEMLTKYHEEL 248
>gi|300174964|dbj|BAJ10717.1| shoot meristemless ortholog [Terniopsis minor]
Length = 379
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IKA+I SHP Y +LLAA+V+C +V P + + + A++ + G + ++
Sbjct: 125 IKAKIMSHPHYTRLLAAYVNCQKVGAPPEV--VARLEEARAAAAMGPAGVV----GSSCI 178
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL-- 153
L P LD F+ Y +L ++++L + ++ EA++ + +E ++LT S
Sbjct: 179 GLDP----ALDQFMEAYCEMLIKYEQELSKPLK----EAMLFLQRVEYQFKSLTVSSPNS 230
Query: 154 --GEGTGATMSDDEDDLHMDFSLDQSASDSHDLMG 186
G+ S +E+ + +D A D H+L G
Sbjct: 231 DSGDANDRNASSEEETEGNNMFIDPQAED-HELKG 264
>gi|82911178|gb|ABB94734.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911378|gb|ABB94834.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911496|gb|ABB94893.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA+I +HP Y LL A++ C ++ P + + +DA + Y
Sbjct: 161 SSHFSGGNEAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-------LTHEY 213
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
+ QQ + + P ELD F+ Y +L + E+L
Sbjct: 214 EN-QQHRTTVSIGMDP----ELDQFMEAYCEMLTKYHEEL 248
>gi|82911468|gb|ABB94879.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA+I +HP Y LL A++ C ++ P + + +DA + Y
Sbjct: 161 SSHFSGGNEAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-------LTHEY 213
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
+ QQ + + P ELD F+ Y +L + E+L
Sbjct: 214 EN-QQHRTTVSIGMDP----ELDQFMEAYCEMLTKYHEEL 248
>gi|270610244|gb|ACZ92179.1| shootmeristemless [Cichorium intybus x Cichorium endivia]
Length = 361
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I SHP Y +LL+A+++C +V P + + ++ S S S +
Sbjct: 96 VKAKIMSHPHYPRLLSAYLNCQKVGAPPEVVERLEEACRASVMAAMSGRSGSGGSGGGMS 155
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
+ + LD F+ Y +L ++++L + + EA++ IE+ +A++ +
Sbjct: 156 TSIVGQDPALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRIESQFKAISFSASDS 211
Query: 156 GTGATMSD----DEDDLHMD 171
G G D E+DL +D
Sbjct: 212 GCGDGGMDRNGSSEEDLDVD 231
>gi|108710345|gb|ABF98140.1| Homeobox protein KNOX3, putative [Oryza sativa Japonica Group]
gi|357640296|gb|AET87097.1| fused compound leaf 1 [Oryza sativa]
Length = 166
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IKA+I SHPLY LL A + C +V P P + +L+ L S + ++
Sbjct: 62 IKAKIMSHPLYPALLRAFIDCQKVGAP----PEVVGRLSALAGELDSRAEDRYLQGQSSD 117
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
ELD F+ Y+ +L +++++L + ++ EA R +E + + T
Sbjct: 118 P-------ELDEFMETYIDMLVSYRQELTRPIQ----EADQFFRNMEAQIDSFT 160
>gi|82911202|gb|ABB94746.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA+I +HP Y LL A++ C ++ P + + +DA + Y
Sbjct: 161 SSHFSGGNEAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-------LTHEY 213
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
+ QQ + + P ELD F+ Y +L + E+L
Sbjct: 214 EN-QQHRTTVSIGMDP----ELDQFMEAYCEMLTKYHEEL 248
>gi|82911136|gb|ABB94713.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+ IKA+I +HP Y LL A++ C ++ P + + +DA L + QQ
Sbjct: 170 AEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA--------LTNEYENQQHRTT 221
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
+ + P ELD F+ Y +L + E+L
Sbjct: 222 VSIGMDP----ELDQFMEAYCEMLTKYHEEL 248
>gi|30348874|gb|AAP31413.1|AF457124_1 knotted1-like homeodomain protein liguleless3 [Zea mays]
Length = 115
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 14/90 (15%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
+L+KA+IASHP Y LL+A++ C +V P + + L + R + +
Sbjct: 39 ELMKAQIASHPRYPSLLSAYIECRKVGA----HPHVTSLLEEVSRERRPDAGAGEIGVD- 93
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
ELD F+ Y VL +KE+L
Sbjct: 94 ---------PELDEFMDAYCRVLVRYKEEL 114
>gi|194688564|gb|ACF78366.1| unknown [Zea mays]
gi|414883466|tpg|DAA59480.1| TPA: rough sheath1 [Zea mays]
Length = 351
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 20/132 (15%)
Query: 42 SHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHE 101
+HP Y LLAA++ C +V P D L + A A+ L + P
Sbjct: 96 AHPQYSALLAAYLDCQKVGAPPDVLERLTAMAAK----------LDARPPGRHEPRDP-- 143
Query: 102 RQELDNFLAQYLIVLCTFKEQLQQHVR-----VHAVEAVMGCREIENTLQALTGVSLGEG 156
ELD F+ Y +L ++E+L + + + VEA + C + +SL +G
Sbjct: 144 --ELDQFMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGG-SSSARLSLADG 200
Query: 157 TGATMSDDEDDL 168
+ EDD+
Sbjct: 201 KSEGVGSSEDDM 212
>gi|225425603|ref|XP_002263313.1| PREDICTED: homeobox protein knotted-1-like 6 [Vitis vinifera]
gi|297739081|emb|CBI28570.3| unnamed protein product [Vitis vinifera]
Length = 318
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+IKA+IASHP Y +LL A++ C +V P + L+D ++ + + V + +
Sbjct: 79 VIKAKIASHPCYPRLLEAYIDCQKVGAPPEIACLLD-EIRRENDVCK----------RDA 127
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQL 123
S ELD F+ Y +L +K L
Sbjct: 128 VSTCLGADPELDEFMETYCDMLEKYKSDL 156
>gi|55669497|gb|AAV54616.1| homeobox transcription factor KN4 [Picea abies]
Length = 260
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 171 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 224
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVR 128
+ + P ELD F+ Y +L + +L + +
Sbjct: 225 --DIGVDP----ELDQFMEAYCQMLIKYHLELSKPFK 255
>gi|357493287|ref|XP_003616932.1| Homeobox protein [Medicago truncatula]
gi|132424661|gb|ABO33483.1| class I KNOX homeobox transcription factor [Medicago truncatula]
gi|355518267|gb|AES99890.1| Homeobox protein [Medicago truncatula]
Length = 312
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 23 VSGHHDQT-----ATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSH 77
V HH+ T + +I +HPL+ +LL+++++CL+V P P + A L +S
Sbjct: 42 VQNHHNYTQHQNNTNNNTCRDKIMAHPLFPRLLSSYLNCLKVGAP----PEVVASLEESC 97
Query: 78 HVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMG 137
+++ + E LD F+ Y +L ++++L + + EA++
Sbjct: 98 AKCEILNGSSGRTGSSSSCIG--EDPGLDQFMEAYCEMLIKYEQELTKPFK----EAMLF 151
Query: 138 CREIENTLQALT-GVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDL 184
IE+ L+A+ G+ A S +E D+H + +LD + + +L
Sbjct: 152 LSRIESQLKAVAVSTDFGQSEFAA-SQNEIDVHEN-NLDTTQGEDQEL 197
>gi|19387168|gb|AAL87120.1| knotted class 1 homeodomain protein liguleless3 [Zea mays]
Length = 120
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 14/92 (15%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
+L+KA+IASHP Y LL+A++ C +V P + + L + R + +
Sbjct: 39 ELMKAQIASHPRYPSLLSAYIECRKVGA----HPHVTSLLEEVSRERRPDAGAGEIGVD- 93
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
ELD F+ Y VL +KE+L +
Sbjct: 94 ---------PELDEFMDAYCRVLVRYKEELTR 116
>gi|145280672|gb|AAT72917.2| class 1 knox [Dendrobium nobile]
Length = 287
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA IASHP Y LL A++ C +V P D L++ ++ G + A+++
Sbjct: 41 MKARIASHPRYPHLLEAYIDCQKVGAPPDIASLLEDIRRENA------GGERVASSSVIL 94
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
P ELD F+ Y VL ++ L++ EA +E L L +
Sbjct: 95 GSDP----ELDEFMEMYCDVLVKYRRDLERPFD----EATAFLNTMEVQLSDLCKPTCRP 146
Query: 156 GTGATMSDD 164
G +SD+
Sbjct: 147 ALGPYVSDE 155
>gi|224117982|ref|XP_002317704.1| predicted protein [Populus trichocarpa]
gi|222858377|gb|EEE95924.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVAT--PIDQLPLIDAQLA 74
TA + +K I+SHPLY L+ H+ CL+V T +D++P + L+
Sbjct: 20 TAEAEALKKRISSHPLYGLLVQTHIDCLKVGTVGDVDRIPRVRPNLS 66
>gi|55669493|gb|AAV54614.1| homeobox transcription factor KN4 [Pinus taeda]
Length = 268
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 12/97 (12%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K++IA HP Y QLL A++ C +V P + + ++D ++ Q + + R G++
Sbjct: 179 SIDALKSKIACHPHYPQLLTAYMDCQKVGAPPEVVTVLD-EIIQENQLGRHSGTM----- 232
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVR 128
+ + P ELD F+ Y +L + +L + +
Sbjct: 233 --DIGVDP----ELDQFMEAYCQMLIKYHLELTKPFK 263
>gi|66865831|gb|AAY57564.1| knotted 1-type homeobox protein 3 [Zea mays]
Length = 105
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 23 VSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPID 64
V+GH + A + +KA+I SHP Y +LLAA + C +V P +
Sbjct: 62 VAGHGGRAADLDPVKAKIVSHPSYHRLLAAFLDCHKVGCPPE 103
>gi|82911350|gb|ABB94820.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911448|gb|ABB94869.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA++ +HP Y LL A++ C ++ P + + +DA + Y
Sbjct: 161 SSHFSGGNEAEAIKAKVLAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-------LTHEY 213
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
+ QQ + + P ELD F+ Y +L + E+L
Sbjct: 214 EN-QQHRTTVSIGMDP----ELDQFMEAYCEMLTKYHEEL 248
>gi|82911416|gb|ABB94853.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA+I +HP Y LL A++ C ++ P + + +DA + Y
Sbjct: 161 SSHFSGGNEAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-------LTHEY 213
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
+ QQ + + P ELD F+ Y +L + E+L
Sbjct: 214 EN-QQHRTTVSIGMDP----ELDQFMEAYSEMLTKYHEEL 248
>gi|165928771|gb|ABY74432.1| knotted-like homeobox protein [Kalanchoe x houghtonii]
Length = 386
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IKA+I SHP LL A++ C +V P P + AQL + +++ +
Sbjct: 119 IKAKIMSHPQCSNLLEAYMDCQKVGAP----PQVVAQLVAAREEFEK-QQGSSSSSGKDI 173
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
S P ELD F+ Y +L ++E+L + ++ EA+ R IE+ L L
Sbjct: 174 SRDP----ELDQFMEAYYHMLLKYREELTRPLQ----EAMDFMRRIESQLNLL 218
>gi|195637536|gb|ACG38236.1| homeobox protein OSH1 [Zea mays]
Length = 255
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 60/153 (39%), Gaps = 22/153 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+IASHP Y LL+A++ C +V P + + L + R + +
Sbjct: 1 MKAQIASHPRYPSLLSAYIECRKVGA----HPHVTSLLEEVSRERRPDAGAGEIGVD--- 53
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
ELD F+ Y VL +KE+L + EA I+ L L
Sbjct: 54 -------PELDEFMDAYCRVLVRYKEELTRPFD----EAASFLSSIQAQLSDLCSGGSSP 102
Query: 156 GTGATMSDDEDDLHMDFSLDQSASDSHDLMGFG 188
AT SDD M S D+ S D+ G
Sbjct: 103 AATATHSDD----MMGSSEDEQCSGDTDVPDMG 131
>gi|3426304|gb|AAC32262.1| Knox class 1 protein [Pisum sativum]
gi|3462612|gb|AAC33008.1| knotted1-like class I homeodomain protein [Pisum sativum]
Length = 371
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LL A+++C +V P + + ++ A + +R G
Sbjct: 114 VKAKIMAHPHYHRLLEAYINCQKVGAPSEVVTRLEEACASA---VRMGGDAVG------- 163
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT------ 149
S E LD F+ Y +L ++++L + ++ EA++ + IE + LT
Sbjct: 164 SGCIGEDPALDQFMEAYCEMLIKYEQELSKPLK----EAMLFLQRIEVQFKNLTVSSSSD 219
Query: 150 GVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMG 186
++ EG S +ED + + ++ ++ +L G
Sbjct: 220 NIACNEGGDRNGSSEEDQVDLYNNMIDPQAEDRELKG 256
>gi|132424651|gb|ABO33478.1| class I KNOX homeobox transcription factor [Medicago truncatula]
Length = 374
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 79/167 (47%), Gaps = 23/167 (13%)
Query: 22 DVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLR 81
+++ H +++ +K++I +HP Y +LL A+++C +V P + + ++ A + +R
Sbjct: 103 NINNHGSSSSSSSSVKSKIMAHPHYHRLLEAYINCQKVGAPSEVVARLEEACATA---VR 159
Query: 82 SYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREI 141
G + E LD F+ Y +L ++++L + ++ EA++ + I
Sbjct: 160 MGGDAVGSG-------CLGEDPALDQFMEAYCEMLIKYEQELSKPLK----EAMLFLQRI 208
Query: 142 ENTLQALT------GVSLGEGTGATMSDDED--DLHMDFSLDQSASD 180
E + LT ++ EG S +ED DL+ + +D A D
Sbjct: 209 EVQFKNLTVSSSSDNIACSEGGDRNGSSEEDHVDLYNNM-IDPQAED 254
>gi|290782316|gb|ADD62366.1| KNOX6 variant a [Medicago truncatula]
Length = 298
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 23 VSGHHDQT-----ATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSH 77
V HH+ T + +I +HPL+ +LL+++++CL+V P P + A L +S
Sbjct: 28 VQNHHNYTQHQNNTNNNTCRDKIMAHPLFPRLLSSYLNCLKVGAP----PEVVASLEESC 83
Query: 78 HVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMG 137
+++ + E LD F+ Y +L ++++L + + EA++
Sbjct: 84 AKCEILNGSSGRTGSSSSCIG--EDPGLDQFMEAYCEMLIKYEQELTKPFK----EAMLF 137
Query: 138 CREIENTLQAL-TGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDL 184
IE+ L+A+ G+ A S +E D+H + +LD + + +L
Sbjct: 138 LSRIESQLKAVAVSTDFGQSEFAA-SQNEIDVHEN-NLDTTQGEDQEL 183
>gi|82912971|gb|ABB95620.1| homeobox transcription factor KN4 [Picea glauca]
Length = 261
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 185 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 238
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 239 --DIGVDP----ELDQFMEAYCQMLIKY 260
>gi|449450628|ref|XP_004143064.1| PREDICTED: homeobox protein knotted-1-like 6-like [Cucumis sativus]
Length = 319
Score = 40.0 bits (92), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 14/134 (10%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+ + KA+I SHP Y +LL A++ C +V P + L++ + R S +Q +
Sbjct: 75 LSVTKAKIVSHPTYPRLLHAYIDCQKVGAPPEVACLLE-------EIRRENDSQEQNGIS 127
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIE-NTLQALTGV 151
P ELD F+ Y +L +K L + H + + +++ L A
Sbjct: 128 TCFGADP----ELDEFMEAYCDMLVKYKSDLSRP--FHEAFSFLNNIQLQLCNLGAPAST 181
Query: 152 SLGEGTGATMSDDE 165
S A SDDE
Sbjct: 182 STPSNEDAMSSDDE 195
>gi|82912867|gb|ABB95568.1| homeobox transcription factor KN4 [Picea glauca]
Length = 261
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 185 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 238
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 239 --DIGVDP----ELDQFMEAYCQMLIKY 260
>gi|82912847|gb|ABB95558.1| homeobox transcription factor KN4 [Picea glauca]
Length = 261
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 185 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 238
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 239 --DIGVDP----ELDQFMEAYCQMLIKY 260
>gi|82908562|gb|ABB93470.1| homeobox transcription factor KN4 [Picea abies]
gi|82912803|gb|ABB95536.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912819|gb|ABB95544.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913015|gb|ABB95642.1| homeobox transcription factor KN4 [Picea glauca]
Length = 260
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 184 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 237
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 238 --DIGVDP----ELDQFMEAYCQMLIKY 259
>gi|82912677|gb|ABB95473.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912679|gb|ABB95474.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912685|gb|ABB95477.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912687|gb|ABB95478.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912695|gb|ABB95482.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912697|gb|ABB95483.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912701|gb|ABB95485.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912703|gb|ABB95486.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912709|gb|ABB95489.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912729|gb|ABB95499.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912753|gb|ABB95511.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912755|gb|ABB95512.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912761|gb|ABB95515.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912777|gb|ABB95523.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912789|gb|ABB95529.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912791|gb|ABB95530.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912809|gb|ABB95539.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912813|gb|ABB95541.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912821|gb|ABB95545.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912823|gb|ABB95546.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912835|gb|ABB95552.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912837|gb|ABB95553.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912841|gb|ABB95555.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912849|gb|ABB95559.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912851|gb|ABB95560.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912855|gb|ABB95562.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912861|gb|ABB95565.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912873|gb|ABB95571.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912875|gb|ABB95572.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912877|gb|ABB95573.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912903|gb|ABB95586.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912905|gb|ABB95587.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912907|gb|ABB95588.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912911|gb|ABB95590.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912915|gb|ABB95592.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912919|gb|ABB95594.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912925|gb|ABB95597.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912927|gb|ABB95598.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912931|gb|ABB95600.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912937|gb|ABB95603.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912939|gb|ABB95604.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912941|gb|ABB95605.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912949|gb|ABB95609.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912951|gb|ABB95610.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912953|gb|ABB95611.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912955|gb|ABB95612.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912961|gb|ABB95615.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912975|gb|ABB95622.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912985|gb|ABB95627.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912999|gb|ABB95634.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913019|gb|ABB95644.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913025|gb|ABB95647.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913031|gb|ABB95650.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913033|gb|ABB95651.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913037|gb|ABB95653.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913057|gb|ABB95663.1| homeobox transcription factor KN4 [Picea glauca]
Length = 261
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 185 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 238
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 239 --DIGVDP----ELDQFMEAYCQMLIKY 260
>gi|82912683|gb|ABB95476.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912705|gb|ABB95487.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912707|gb|ABB95488.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912711|gb|ABB95490.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912715|gb|ABB95492.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912723|gb|ABB95496.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912727|gb|ABB95498.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912737|gb|ABB95503.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912741|gb|ABB95505.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912749|gb|ABB95509.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912751|gb|ABB95510.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912763|gb|ABB95516.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912767|gb|ABB95518.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912769|gb|ABB95519.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912785|gb|ABB95527.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912795|gb|ABB95532.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912797|gb|ABB95533.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912799|gb|ABB95534.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912805|gb|ABB95537.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912807|gb|ABB95538.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912811|gb|ABB95540.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912833|gb|ABB95551.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912839|gb|ABB95554.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912869|gb|ABB95569.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912871|gb|ABB95570.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912887|gb|ABB95578.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912895|gb|ABB95582.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912897|gb|ABB95583.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912899|gb|ABB95584.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912901|gb|ABB95585.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912935|gb|ABB95602.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912943|gb|ABB95606.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912945|gb|ABB95607.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912957|gb|ABB95613.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912959|gb|ABB95614.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912965|gb|ABB95617.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912967|gb|ABB95618.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912969|gb|ABB95619.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912973|gb|ABB95621.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912983|gb|ABB95626.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913003|gb|ABB95636.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913009|gb|ABB95639.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913021|gb|ABB95645.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913029|gb|ABB95649.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913035|gb|ABB95652.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913039|gb|ABB95654.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913043|gb|ABB95656.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913047|gb|ABB95658.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913059|gb|ABB95664.1| homeobox transcription factor KN4 [Picea glauca]
Length = 261
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 185 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 238
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 239 --DIGVDP----ELDQFMEAYCQMLIKY 260
>gi|82909622|gb|ABB93979.1| homeobox transcription factor KN4 [Picea mariana]
gi|82912681|gb|ABB95475.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912691|gb|ABB95480.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912693|gb|ABB95481.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912717|gb|ABB95493.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912719|gb|ABB95494.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912725|gb|ABB95497.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912733|gb|ABB95501.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912735|gb|ABB95502.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912739|gb|ABB95504.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912745|gb|ABB95507.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912747|gb|ABB95508.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912773|gb|ABB95521.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912783|gb|ABB95526.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912787|gb|ABB95528.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912793|gb|ABB95531.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912815|gb|ABB95542.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912817|gb|ABB95543.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912825|gb|ABB95547.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912829|gb|ABB95549.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912857|gb|ABB95563.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912865|gb|ABB95567.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912881|gb|ABB95575.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912883|gb|ABB95576.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912909|gb|ABB95589.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912921|gb|ABB95595.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912923|gb|ABB95596.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912929|gb|ABB95599.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912963|gb|ABB95616.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912977|gb|ABB95623.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912993|gb|ABB95631.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913011|gb|ABB95640.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913027|gb|ABB95648.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913045|gb|ABB95657.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913049|gb|ABB95659.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913055|gb|ABB95662.1| homeobox transcription factor KN4 [Picea glauca]
Length = 261
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 185 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 238
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 239 --DIGVDP----ELDQFMEAYCQMLIKY 260
>gi|82908522|gb|ABB93450.1| homeobox transcription factor KN4 [Picea abies]
gi|82908526|gb|ABB93452.1| homeobox transcription factor KN4 [Picea abies]
gi|82908534|gb|ABB93456.1| homeobox transcription factor KN4 [Picea abies]
gi|82908536|gb|ABB93457.1| homeobox transcription factor KN4 [Picea abies]
gi|82908538|gb|ABB93458.1| homeobox transcription factor KN4 [Picea abies]
gi|82908546|gb|ABB93462.1| homeobox transcription factor KN4 [Picea abies]
gi|82908550|gb|ABB93464.1| homeobox transcription factor KN4 [Picea abies]
gi|82908552|gb|ABB93465.1| homeobox transcription factor KN4 [Picea abies]
gi|82908558|gb|ABB93468.1| homeobox transcription factor KN4 [Picea abies]
gi|82908560|gb|ABB93469.1| homeobox transcription factor KN4 [Picea abies]
gi|82908564|gb|ABB93471.1| homeobox transcription factor KN4 [Picea abies]
gi|82908568|gb|ABB93473.1| homeobox transcription factor KN4 [Picea abies]
gi|82908570|gb|ABB93474.1| homeobox transcription factor KN4 [Picea abies]
gi|82908578|gb|ABB93478.1| homeobox transcription factor KN4 [Picea abies]
gi|82908580|gb|ABB93479.1| homeobox transcription factor KN4 [Picea abies]
gi|82908584|gb|ABB93481.1| homeobox transcription factor KN4 [Picea abies]
gi|82908586|gb|ABB93482.1| homeobox transcription factor KN4 [Picea abies]
gi|82908588|gb|ABB93483.1| homeobox transcription factor KN4 [Picea abies]
gi|82908590|gb|ABB93484.1| homeobox transcription factor KN4 [Picea abies]
gi|82908602|gb|ABB93490.1| homeobox transcription factor KN4 [Picea abies]
gi|82908606|gb|ABB93492.1| homeobox transcription factor KN4 [Picea abies]
gi|82908610|gb|ABB93494.1| homeobox transcription factor KN4 [Picea abies]
gi|82909578|gb|ABB93957.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909582|gb|ABB93959.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909584|gb|ABB93960.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909586|gb|ABB93961.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909588|gb|ABB93962.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909590|gb|ABB93963.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909592|gb|ABB93964.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909594|gb|ABB93965.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909596|gb|ABB93966.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909600|gb|ABB93968.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909604|gb|ABB93970.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909606|gb|ABB93971.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909608|gb|ABB93972.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909610|gb|ABB93973.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909612|gb|ABB93974.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909614|gb|ABB93975.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909618|gb|ABB93977.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909620|gb|ABB93978.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909624|gb|ABB93980.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909626|gb|ABB93981.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909628|gb|ABB93982.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909630|gb|ABB93983.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909632|gb|ABB93984.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909634|gb|ABB93985.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909636|gb|ABB93986.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909638|gb|ABB93987.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909640|gb|ABB93988.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909642|gb|ABB93989.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909644|gb|ABB93990.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909646|gb|ABB93991.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909648|gb|ABB93992.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909650|gb|ABB93993.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909652|gb|ABB93994.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909654|gb|ABB93995.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909656|gb|ABB93996.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909658|gb|ABB93997.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909660|gb|ABB93998.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909662|gb|ABB93999.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909666|gb|ABB94001.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909668|gb|ABB94002.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909670|gb|ABB94003.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909672|gb|ABB94004.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909674|gb|ABB94005.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909676|gb|ABB94006.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909678|gb|ABB94007.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909680|gb|ABB94008.1| homeobox transcription factor KN4 [Picea mariana]
gi|82912689|gb|ABB95479.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912731|gb|ABB95500.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912743|gb|ABB95506.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912757|gb|ABB95513.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912759|gb|ABB95514.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912801|gb|ABB95535.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912831|gb|ABB95550.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912853|gb|ABB95561.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912879|gb|ABB95574.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912885|gb|ABB95577.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912891|gb|ABB95580.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912913|gb|ABB95591.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912947|gb|ABB95608.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912979|gb|ABB95624.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912981|gb|ABB95625.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912989|gb|ABB95629.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913005|gb|ABB95637.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913007|gb|ABB95638.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913023|gb|ABB95646.1| homeobox transcription factor KN4 [Picea glauca]
Length = 260
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 184 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 237
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 238 --DIGVDP----ELDQFMEAYCQMLIKY 259
>gi|82912775|gb|ABB95522.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912779|gb|ABB95524.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912917|gb|ABB95593.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913001|gb|ABB95635.1| homeobox transcription factor KN4 [Picea glauca]
Length = 260
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 184 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 237
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 238 --DIGVDP----ELDQFMEAYCQMLIKY 259
>gi|82912781|gb|ABB95525.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912889|gb|ABB95579.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913041|gb|ABB95655.1| homeobox transcription factor KN4 [Picea glauca]
Length = 258
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 182 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 235
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 236 --DIGVDP----ELDQFMEAYCQMLIKY 257
>gi|82908520|gb|ABB93449.1| homeobox transcription factor KN4 [Picea abies]
gi|82908528|gb|ABB93453.1| homeobox transcription factor KN4 [Picea abies]
gi|82908544|gb|ABB93461.1| homeobox transcription factor KN4 [Picea abies]
gi|82908548|gb|ABB93463.1| homeobox transcription factor KN4 [Picea abies]
gi|82908554|gb|ABB93466.1| homeobox transcription factor KN4 [Picea abies]
gi|82908556|gb|ABB93467.1| homeobox transcription factor KN4 [Picea abies]
gi|82908574|gb|ABB93476.1| homeobox transcription factor KN4 [Picea abies]
gi|82908576|gb|ABB93477.1| homeobox transcription factor KN4 [Picea abies]
gi|82908582|gb|ABB93480.1| homeobox transcription factor KN4 [Picea abies]
gi|82908592|gb|ABB93485.1| homeobox transcription factor KN4 [Picea abies]
gi|82908596|gb|ABB93487.1| homeobox transcription factor KN4 [Picea abies]
gi|82908598|gb|ABB93488.1| homeobox transcription factor KN4 [Picea abies]
gi|82908608|gb|ABB93493.1| homeobox transcription factor KN4 [Picea abies]
gi|82912933|gb|ABB95601.1| homeobox transcription factor KN4 [Picea glauca]
Length = 260
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 184 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 237
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 238 --DIGVDP----ELDQFMEAYCQMLIKY 259
>gi|82908524|gb|ABB93451.1| homeobox transcription factor KN4 [Picea abies]
gi|82908532|gb|ABB93455.1| homeobox transcription factor KN4 [Picea abies]
gi|82908542|gb|ABB93460.1| homeobox transcription factor KN4 [Picea abies]
gi|82908566|gb|ABB93472.1| homeobox transcription factor KN4 [Picea abies]
gi|82908572|gb|ABB93475.1| homeobox transcription factor KN4 [Picea abies]
gi|82908594|gb|ABB93486.1| homeobox transcription factor KN4 [Picea abies]
gi|82908604|gb|ABB93491.1| homeobox transcription factor KN4 [Picea abies]
gi|82909580|gb|ABB93958.1| homeobox transcription factor KN4 [Picea mariana]
gi|82912713|gb|ABB95491.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912721|gb|ABB95495.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912765|gb|ABB95517.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912771|gb|ABB95520.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912827|gb|ABB95548.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912843|gb|ABB95556.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912845|gb|ABB95557.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912859|gb|ABB95564.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912863|gb|ABB95566.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912893|gb|ABB95581.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912987|gb|ABB95628.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912991|gb|ABB95630.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912995|gb|ABB95632.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912997|gb|ABB95633.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913013|gb|ABB95641.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913017|gb|ABB95643.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913051|gb|ABB95660.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913053|gb|ABB95661.1| homeobox transcription factor KN4 [Picea glauca]
Length = 260
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 184 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 237
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 238 --DIGVDP----ELDQFMEAYCQMLIKY 259
>gi|82912699|gb|ABB95484.1| homeobox transcription factor KN4 [Picea glauca]
Length = 260
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 184 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 237
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 238 --DIGVDP----ELDQFMEAYCQMLIKY 259
>gi|82908540|gb|ABB93459.1| homeobox transcription factor KN4 [Picea abies]
gi|82908600|gb|ABB93489.1| homeobox transcription factor KN4 [Picea abies]
Length = 260
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 184 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 237
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 238 --DIGVDP----ELDQFMEAYCQMLIKY 259
>gi|82909664|gb|ABB94000.1| homeobox transcription factor KN4 [Picea mariana]
Length = 259
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 183 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 236
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 237 --DIGVDP----ELDQFMEAYCQMLIKY 258
>gi|58011287|gb|AAW62518.1| KNOTTED1-like protein [Selaginella kraussiana]
Length = 315
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 16/117 (13%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA I+ HP Y +L+ AH+S +V ++A+ + V+R + Q ++ + N
Sbjct: 69 MKAAISGHPQYLELIKAHMSIKKVGAS-------SQKVAEINEVIRMHQDSQPSSVHTNI 121
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
+P ELD F+ Y VL ++ QL + A+ C++ E L+ L VS
Sbjct: 122 GANP----ELDQFMVAYCDVLNMYENQLNKAF----TGAIEYCKQQEQELK-LVSVS 169
>gi|297739199|emb|CBI28850.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 42 SHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHE 101
+HP Y +LLAA+V+C +V P + + ++ A + RS S E
Sbjct: 2 AHPHYPRLLAAYVNCQKVGAPPEVVARLEEACASEEAMGRSATSCV------------GE 49
Query: 102 RQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS----LGEGT 157
LD F+ Y +L ++++L + + EA++ IE +ALT G
Sbjct: 50 DPALDQFMEAYCEMLTKYEQELTKPFK----EAMLFLSRIECQFKALTVAPSDSVCGSYA 105
Query: 158 GATMSDDEDDLHMDFSLDQSASD 180
G S +E+ D +D A D
Sbjct: 106 GRVGSSEEEVDGNDTCIDPQAED 128
>gi|82909598|gb|ABB93967.1| homeobox transcription factor KN4 [Picea mariana]
gi|82909602|gb|ABB93969.1| homeobox transcription factor KN4 [Picea mariana]
Length = 260
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 184 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 237
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 238 --DIGVDP----ELDQFMEAYCQMLIKY 259
>gi|82909616|gb|ABB93976.1| homeobox transcription factor KN4 [Picea mariana]
Length = 260
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 184 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 237
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 238 --DIGVDP----ELDQFMEAYCQMLIKY 259
>gi|82909222|gb|ABB93781.1| homeobox transcription factor KN2 [Picea mariana]
Length = 248
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 12/100 (12%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA++ +HP Y LL A++ C ++ P + + +DA + Y
Sbjct: 161 SSHFSGGNEAEAIKAKMLAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-------LTHEY 213
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
+ QQ + + P ELD F+ Y +L + E+L
Sbjct: 214 EN-QQHRTTVSIGMDP----ELDQFMEAYCEMLTKYHEEL 248
>gi|60476416|gb|AAX21347.1| homeobox knotted-1-like protein KNOX3 [Lotus japonicus]
Length = 227
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 64/155 (41%), Gaps = 25/155 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IKA+I SHP Y +LL A++ C +V P + L++ ++ R S + +
Sbjct: 1 IKAKIVSHPQYPRLLQAYIECQKVGAPPEIARLLEEIRRENDLCKRDVVSTRFGAD---- 56
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL-TGVSLG 154
ELD F+ Y +L +K L + EA +IE L L TG S+
Sbjct: 57 -------PELDEFMESYCDMLVKYKSDLARPFD----EASNFLNKIEMQLSNLCTGASVP 105
Query: 155 --EGTGATMSDDEDDLHMDFSL-DQSASDSHDLMG 186
G SD+E FS D A D L G
Sbjct: 106 TLSDEGGVSSDEE------FSTGDGDAQDGQQLRG 134
>gi|217072832|gb|ACJ84776.1| unknown [Medicago truncatula]
Length = 184
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
+G D A+ ++KA+IASHP Y +LL A++ C +V P + L++ ++ + + + +
Sbjct: 61 AGIQDDVAS-NIMKAKIASHPYYPRLLQAYIDCQKVGAPPEIASLLE-EIRRENDMCK-- 116
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
+ + P ELD F+ Y +L +K L +
Sbjct: 117 ---RDVVVSTCFGADP----ELDEFMESYCDMLVKYKSDLTR 151
>gi|119507932|dbj|BAF42340.1| KNOX class 1 homeodomain protein [Oryza sativa Japonica Group]
Length = 201
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A + IKA+I +HP Y LLAA++ C +V P + L + A A+ L
Sbjct: 85 AAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAK----------LDAR 134
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTL 145
+ + P ELD F+A Y +L ++E+L + + EA+ + +E+ L
Sbjct: 135 PPGRHDARDP----ELDQFMA-YCNMLAKYREELTRPID----EAMEFLKRVESQL 181
>gi|114432128|gb|ABI74672.1| class I KNOX-like 1 protein [Elaeis guineensis]
Length = 352
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+IKA+I +HP Y +LL+A+V+C +V P + + ++ A S ++ S A +
Sbjct: 87 VIKAKIMAHPQYPRLLSAYVNCHKVGAPPEVVARLEEACATS--LMMGRASSSSAAGDGG 144
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
E LD F+ Y +L ++++L + + EA++ I+ ++L+
Sbjct: 145 SGGGGGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRIDAQFKSLS 195
>gi|55669499|gb|AAV54617.1| homeobox transcription factor KN4 [Picea glauca]
Length = 248
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +K +IA HP Y QLLAA++ C ++ P + + ++D +++Q + + R ++
Sbjct: 172 SIDTLKTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATM----- 225
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTF 119
+ + P ELD F+ Y +L +
Sbjct: 226 --DIGVDP----ELDQFMEAYCQMLIKY 247
>gi|148536339|gb|ABQ85722.1| shoot meristemless-like protein, partial [Populus nigra]
Length = 93
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+ +C +V P P + A+L ++ S S+ AN
Sbjct: 15 VKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEA---CASAASIAPANTG--- 64
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
E LD F+ Y +L ++++L +
Sbjct: 65 --CIGEDPALDQFMEAYCEMLTKYEQELSK 92
>gi|221272024|sp|Q10EC6.2|KNOS9_ORYSJ RecName: Full=Homeobox protein knotted-1-like 9
gi|222625876|gb|EEE60008.1| hypothetical protein OsJ_12750 [Oryza sativa Japonica Group]
Length = 347
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQL 66
+KAEI SHP Y LLAA++ C +V P D L
Sbjct: 81 MKAEIMSHPQYSALLAAYLGCKKVGAPPDVL 111
>gi|187606720|emb|CAQ51274.1| putative knotted1-like protein [Helianthus tuberosus]
Length = 361
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I SHP Y +LL+A+++C ++ P + + ++ S S S ++
Sbjct: 94 VKAKIMSHPHYPRLLSAYLNCQKIGAPPEVVERLEEACRASVVAAMSSRSGGAGTSDGGG 153
Query: 96 SLSPHERQE--LDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL----T 149
++ Q+ LD F+ Y +L ++++L + + EA++ IE+ +A+ +
Sbjct: 154 GMNMIIGQDPALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRIESQFKAISISTS 209
Query: 150 GVSLGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMG 186
+ GEG E+++ ++ +L ++ +L G
Sbjct: 210 DSAGGEGGMDKNGSSEEEVDVNNNLIDPQAEDRELKG 246
>gi|449440664|ref|XP_004138104.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
gi|449477432|ref|XP_004155021.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
Length = 308
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+I+A+IASHPLY +L+ A ++C +V+ P + ++D Q + +++ N N
Sbjct: 78 VIRAKIASHPLYPKLVDAFLNCQKVSAPPEVAKILD-QYNRGNNI---------GNENPG 127
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
S ELD F+ + +L ++ L Q
Sbjct: 128 VSTCLGTDPELDEFMEIFCELLAKYELDLYQ 158
>gi|302791343|ref|XP_002977438.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300154808|gb|EFJ21442.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 313
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 18/137 (13%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
I + I+ HP Y++LL AH++C +V D +D + + R + S + +
Sbjct: 71 IMSAISGHPQYKELLRAHMNCYKVGASADLAAQMDELVRK-----REFESAVKT----SI 121
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
+ P ELD F+ Y VL ++ +L++ + EA+ C++ E+ L ++ VS +
Sbjct: 122 GVDP----ELDQFMVAYCNVLNAYEIELRRTFK----EAIEFCKKQEHQL-SVIAVSNID 172
Query: 156 GTGATMSDDEDDLHMDF 172
+ ++D + + DF
Sbjct: 173 VLSSAENEDASETYEDF 189
>gi|297734598|emb|CBI16649.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
I+ +IA+HPLY +LL A++ C +V P + L++ ++ + + R N
Sbjct: 21 IRTQIATHPLYPKLLHAYIECQKVGAPPEVAYLLE-EIRRGSELCR----------RNTV 69
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
S ELD F+ Y VL +K L +
Sbjct: 70 STCLGADPELDEFMETYCNVLMKYKSDLAR 99
>gi|47229415|emb|CAF99403.1| unnamed protein product [Tetraodon nigroviridis]
Length = 701
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 4 PSLGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQL--LAAHVSCLRVAT 61
P++G GS +G G GG + SG +A + + KA++ S P ++L LA + SC +
Sbjct: 12 PAIGAAGSVPAGPGAGGTEGSGTAGGSARIAVKKAQLRSSPRPKKLEKLAVYSSCKLLRK 71
Query: 62 PIDQL--PLIDAQ 72
I Q+ P+++ Q
Sbjct: 72 SILQMGKPMLETQ 84
>gi|302786494|ref|XP_002975018.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300157177|gb|EFJ23803.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 312
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 18/137 (13%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
I + I+ HP Y++LL AH++C +V D +D + + R + S + +
Sbjct: 70 IMSAISGHPQYKELLRAHMNCYKVGASADLAAQMDELVRK-----REFESAVKT----SI 120
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
+ P ELD F+ Y VL ++ +L++ + EA+ C++ E+ L ++ VS +
Sbjct: 121 GVDP----ELDQFMVAYCNVLNAYEIELRRTFK----EAIEFCKKQEHQL-SVIAVSNID 171
Query: 156 GTGATMSDDEDDLHMDF 172
+ ++D + + DF
Sbjct: 172 VLSSAENEDASETYEDF 188
>gi|164454385|dbj|BAF96739.1| knotted1-like homeobox transcription factor MKN2 [Physcomitrella
patens]
Length = 410
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 22/154 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
++A I HP Y +++ AHV ++ P +D + + + Q ++ +
Sbjct: 147 LRAAIIDHPFYPEMVLAHVRVFKIGAPRRLRRKLD-------ELAKKFQRFQDCDHTSKI 199
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
P ELD+F+ Y+ VL F E L++ + +NT +AL +
Sbjct: 200 GSDP----ELDHFMRSYVGVLTKFAEDLEEPFNKFI-------QFTDNTSKALEEIC--- 245
Query: 156 GTGATMSDDEDDLHMDF-SLDQSASDSHDLMGFG 188
G + DED+ D L+ A + DL G
Sbjct: 246 GHYVDTTPDEDNCGFDIGPLEYGAQEGDDLDTLG 279
>gi|297722585|ref|NP_001173656.1| Os03g0772100 [Oryza sativa Japonica Group]
gi|108711301|gb|ABF99096.1| KNOX1 domain containing protein [Oryza sativa Japonica Group]
gi|255674932|dbj|BAH92384.1| Os03g0772100 [Oryza sativa Japonica Group]
Length = 385
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQL 66
+KAEI SHP Y LLAA++ C +V P D L
Sbjct: 81 MKAEIMSHPQYSALLAAYLGCKKVGAPPDVL 111
>gi|300676313|gb|ADK26526.1| KNOTTED1-like protein [Petunia x hybrida]
Length = 357
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 23 VSGHH----DQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHH 78
V HH + + V +KA+I +HP LL A++ C +V P P + A+L+
Sbjct: 78 VHNHHHESENSSGEVVGLKAKILAHPQCSSLLDAYMDCQKVGAP----PEVMARLS---- 129
Query: 79 VLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGC 138
LR ++Q + ++ + ELD F+ Y +L ++E+L + ++ EA+
Sbjct: 130 TLRQEFEMRQRASLTGKDVA--KDPELDQFMEAYYDMLVKYREELTRPLQ----EAMDFM 183
Query: 139 REIENTLQAL 148
R IE L L
Sbjct: 184 RTIETQLNML 193
>gi|148536335|gb|ABQ85720.1| shoot meristemless-like protein, partial [Populus deltoides]
gi|148536337|gb|ABQ85721.1| shoot meristemless-like protein, partial [Populus maximowiczii]
gi|148536341|gb|ABQ85723.1| shoot meristemless-like protein, partial [Populus trichocarpa]
Length = 92
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+ +C +V P P + A+L ++ S S+ AN
Sbjct: 14 VKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEA---CASAASIAPANTG--- 63
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
E LD F+ Y +L ++++L +
Sbjct: 64 --CIGEDPALDQFMEAYCEMLTKYEQELSK 91
>gi|297741767|emb|CBI32996.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 42 SHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHE 101
+HP Y +LLAA+ +C +V P + + ++ A ++R+ S E
Sbjct: 2 AHPHYHRLLAAYANCQKVGAPPEVVARLEEACASEAAMVRTGTSCI------------GE 49
Query: 102 RQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL----GEGT 157
LD F+ Y +L ++++L + + EA++ +E +ALT S GEG
Sbjct: 50 DPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRVECQFKALTVSSSDSAGGEGL 105
Query: 158 GATMSDDED-DLHMDFSLDQSASD 180
S +E+ D++ +F +D A D
Sbjct: 106 DRNGSSEEEVDVNNNF-IDPQAED 128
>gi|11037020|gb|AAG27464.1|AF308454_1 knotted class I homeodomain KNOX [Medicago truncatula]
Length = 381
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 23/153 (15%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+K++I +HP Y +LL A+++C +V P + + ++ A + +R G +
Sbjct: 124 VKSKIMAHPHYHRLLEAYINCQKVGAPSEVVARLEEACATA---VRMGGDAVGSG----- 175
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT------ 149
E LD F+ Y +L ++++L + ++ EA++ + IE + LT
Sbjct: 176 --CLGEDPALDQFMEAYCEMLIKYEQELSKPLK----EAMLFLQRIEVQFKNLTVSSSSD 229
Query: 150 GVSLGEGTGATMSDDED--DLHMDFSLDQSASD 180
++ EG S +ED DL+ + +D A D
Sbjct: 230 NIACSEGGDRNGSSEEDHVDLYNNM-IDPQAED 261
>gi|168011803|ref|XP_001758592.1| KNOX class 1 protein MKN2 [Physcomitrella patens subsp. patens]
gi|162690202|gb|EDQ76570.1| KNOX class 1 protein MKN2 [Physcomitrella patens subsp. patens]
Length = 445
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 22/154 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
++A I HP Y +++ AHV ++ P +D + + + Q ++ +
Sbjct: 182 LRAAIIDHPFYPEMVLAHVRVFKIGAPRRLRRKLD-------ELAKKFQRFQDCDHTSKI 234
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
P ELD+F+ Y+ VL F E L++ + +NT +AL +
Sbjct: 235 GSDP----ELDHFMRSYVGVLTKFAEDLEEPFNKFI-------QFTDNTSKALEEIC--- 280
Query: 156 GTGATMSDDEDDLHMDF-SLDQSASDSHDLMGFG 188
G + DED+ D L+ A + DL G
Sbjct: 281 GHYVDTTPDEDNCGFDIGPLEYGAQEGDDLDTLG 314
>gi|20977642|gb|AAM28231.1| knotted-1-like protein 1 [Helianthus annuus]
Length = 362
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I SHP Y +LL+A+++C ++ P + + ++ S V+ + S ++
Sbjct: 94 VKAKIMSHPHYPRLLSAYLNCQKIGAPPEVVERLEEACRAS--VVAAMSSCSGGAGTSDG 151
Query: 96 S-----LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
S + + LD F+ Y +L ++++L + + EA++ IE+ +A++
Sbjct: 152 SGGGMNMIIGQDPALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRIESQFKAIS 206
>gi|254749398|dbj|BAH86595.1| class2 knotted-like homeobox [Selaginella uncinata]
Length = 111
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/20 (90%), Positives = 19/20 (95%)
Query: 194 ETERSLMERVRQELKIELKQ 213
ETER+LMERVR ELKIELKQ
Sbjct: 2 ETERTLMERVRHELKIELKQ 21
>gi|55669495|gb|AAV54615.1| homeobox transcription factor KN4 [Pinus strobus]
Length = 262
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLID 70
++ +K++IA HP Y QLLAA++ C +V P + + ++D
Sbjct: 186 SIDALKSKIACHPHYPQLLAAYMDCQKVGAPPEVVTVLD 224
>gi|91789483|ref|YP_550435.1| DNA repair protein RecO [Polaromonas sp. JS666]
gi|119361471|sp|Q126K5.1|RECO_POLSJ RecName: Full=DNA repair protein RecO; AltName: Full=Recombination
protein O
gi|91698708|gb|ABE45537.1| DNA repair protein RecO [Polaromonas sp. JS666]
Length = 249
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 21/136 (15%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLA-------QSHHVLRS 82
+ATVQL+ AS + LA LR+ I LPL+DA+ A Q+ +VL +
Sbjct: 118 SATVQLL----ASQSVDTLQLALRAFELRLLRDIGLLPLLDAETATLAPLEPQARYVLVA 173
Query: 83 YGSLQQANNNNNHSLSPHERQEL-----DNFLAQYLIVLCT-----FKEQLQQHVRVHAV 132
L+QA++++ +SL + Q L DN L + C K QL+ + H
Sbjct: 174 EAGLRQAHDDDRNSLPGVQWQALQQALGDNALFSDTVRACIPGLNELKTQLRALLHYHCG 233
Query: 133 EAVMGCREIENTLQAL 148
V+ R++ LQAL
Sbjct: 234 VKVLKTRQMMMDLQAL 249
>gi|300174956|dbj|BAJ10713.1| shoot meristemless ortholog [Weddellina squamulosa]
Length = 356
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 26/153 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLR--SYGSLQQANNNN 93
IKA+I SHP Y +LL+A+V+C +V P + + ++ A + + G + Q
Sbjct: 102 IKAKIMSHPHYTRLLSAYVNCQKVGAPPEVVARLEEARAAAAAAALGPAGGCIGQ----- 156
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT---- 149
LD F+ Y +L ++++L + ++ EA++ + +E +ALT
Sbjct: 157 --------DPALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRVEFQFKALTLSSP 204
Query: 150 --GVSLGEGTGATMSDDEDDLHMDFSLDQSASD 180
G S GE S +E+ + +D A D
Sbjct: 205 CSGYS-GEANERNASSEEEGDGNNVFIDPQAED 236
>gi|302786492|ref|XP_002975017.1| hypothetical protein SELMODRAFT_415291 [Selaginella moellendorffii]
gi|300157176|gb|EFJ23802.1| hypothetical protein SELMODRAFT_415291 [Selaginella moellendorffii]
Length = 336
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 17/114 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
I + I+ HP Y++LL AH++C +V D +D + + R + S + +
Sbjct: 70 IMSAISGHPQYKELLRAHMNCYKVGASADLAAQMDELVRK-----REFESAVKT----SI 120
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ P ELD F+ Y VL ++ +L++ + EA+ C++ E+ L +
Sbjct: 121 GVDP----ELDQFMVAYCNVLNAYEIELRRTFK----EAIEFCKKQEHQLSVIA 166
>gi|66865829|gb|AAY57562.1| knotted 1-type homeobox protein 8 [Zea mays]
Length = 194
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 25/147 (17%)
Query: 42 SHPLYEQLLAAHVSCLRVATPIDQLPLIDAQL-----AQSHHVLRSYGSLQQANNNNNHS 96
+HP Y LLAA++ C +V P D + A AQ + R G ++
Sbjct: 1 AHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAANLDAQPGPISRRRGPTTTRADD---- 56
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
ELD F+ Y +L F E++ + ++ EA E N+++ G ++ +
Sbjct: 57 ------PELDQFMEAYCNMLVKFHEEMARPIQ----EAT----EFFNSMERQLGSTISDS 102
Query: 157 TG--ATMSDDEDDLHMDFSLDQSASDS 181
A S+DE D +D A D
Sbjct: 103 NCEVAGSSEDEQDASCPEEIDPCAEDK 129
>gi|144905100|dbj|BAF56426.1| SHOOTMERISTEMLESS-like protein [Ruscus aculeatus]
Length = 321
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 55/108 (50%), Gaps = 12/108 (11%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
++KA+I SHP Y +LL+A+++C +V P + + ++ + S + R+ S + +
Sbjct: 42 ILKAKIMSHPHYPKLLSAYINCQKVGAPPEVVARLEEACSSSLMIGRAASSSSSSAVGGD 101
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIE 142
+ LD F+ Y +L ++++L + + EA+M I+
Sbjct: 102 PA--------LDQFMEAYCEMLTKYEQELSKPFK----EAMMFLSRID 137
>gi|393705671|gb|AFN17081.1| knotted1, partial [Panicum virgatum]
Length = 109
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 44 PLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQ 103
P Y LLAA++ C + P+ P + A+LA L+ L
Sbjct: 1 PHYYSLLAAYLECQKERPPVGAPPEVSARLAAMTQ------ELEARQRTALGGLGAATEP 54
Query: 104 ELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
ELD F+ Y +L F+E+L + ++ EA+ R +E+ L +L+
Sbjct: 55 ELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 96
>gi|82907986|gb|ABB93182.1| homeobox transcription factor KN1 [Picea abies]
gi|82908014|gb|ABB93196.1| homeobox transcription factor KN1 [Picea abies]
Length = 238
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + + +DA + R Y N
Sbjct: 173 IKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-------LTREY------QNQQRR 219
Query: 96 SLSPHERQELDNFLAQY 112
++S ELD F+ Y
Sbjct: 220 TVSIGMDPELDQFMEAY 236
>gi|15341495|gb|AAK95645.1| KNAP2-like protein [Malus x domestica]
Length = 76
Score = 37.4 bits (85), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPID 64
V+ IKA+I +HP Y LL A++ C RV P D
Sbjct: 23 VEAIKAKIIAHPQYSNLLEAYMDCQRVGAPSD 54
>gi|302791345|ref|XP_002977439.1| hypothetical protein SELMODRAFT_451276 [Selaginella moellendorffii]
gi|300154809|gb|EFJ21443.1| hypothetical protein SELMODRAFT_451276 [Selaginella moellendorffii]
Length = 307
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 17/114 (14%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
I + I+ HP Y++LL AH++C +V D +D + + R + S + +
Sbjct: 59 IMSAISGHPQYKELLRAHMNCYKVGASADLAAQMDELVRK-----REFESAVKT----SI 109
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ P ELD F+ Y VL ++ +L++ + EA+ C++ E+ L +
Sbjct: 110 GVDP----ELDQFMVAYCNVLNAYEIELRRTFK----EAIEFCKKQEHQLSVIA 155
>gi|55669481|gb|AAV54608.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910338|gb|ABB94321.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910340|gb|ABB94322.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910348|gb|ABB94326.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910362|gb|ABB94333.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910364|gb|ABB94334.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910406|gb|ABB94355.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910440|gb|ABB94372.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910456|gb|ABB94380.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910508|gb|ABB94406.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910512|gb|ABB94408.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910518|gb|ABB94411.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910530|gb|ABB94417.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910580|gb|ABB94442.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910646|gb|ABB94475.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910654|gb|ABB94479.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + + +DA + R Y N
Sbjct: 173 IKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-------LTREY------QNQQRR 219
Query: 96 SLSPHERQELDNFLAQY 112
++S ELD F+ Y
Sbjct: 220 TVSIGMDPELDQFMEAY 236
>gi|82910442|gb|ABB94373.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910478|gb|ABB94391.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910510|gb|ABB94407.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910564|gb|ABB94434.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910566|gb|ABB94435.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910708|gb|ABB94506.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + + +DA + R Y N
Sbjct: 173 IKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-------LTREY------QNQQRR 219
Query: 96 SLSPHERQELDNFLAQY 112
++S ELD F+ Y
Sbjct: 220 TVSIGMDPELDQFMEAY 236
>gi|82910690|gb|ABB94497.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910720|gb|ABB94512.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + + +DA + R Y N
Sbjct: 173 IKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-------LTREY------QNQQRR 219
Query: 96 SLSPHERQELDNFLAQY 112
++S ELD F+ Y
Sbjct: 220 TVSIGMDPELDQFMEAY 236
>gi|82911334|gb|ABB94812.1| homeobox transcription factor KN2 [Picea glauca]
Length = 250
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 14/102 (13%)
Query: 24 SGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSY 83
S H + IKA+I +HP Y LL A++ C ++ P + + +DA + Y
Sbjct: 161 SSHFSGGNEAEAIKAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDA-------LTHEY 213
Query: 84 GSLQQANNNNNHSLSPHERQELDNFLAQ--YLIVLCTFKEQL 123
+ QQ + + P ELD F+ + Y +L + E+L
Sbjct: 214 EN-QQHRTTVSIGMDP----ELDQFMVKEAYCEMLTKYHEEL 250
>gi|82910360|gb|ABB94332.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910686|gb|ABB94495.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + + +DA + R Y N
Sbjct: 173 IKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-------LTREY------QNQQRR 219
Query: 96 SLSPHERQELDNFLAQY 112
++S ELD F+ Y
Sbjct: 220 TVSIGMDPELDQFMEAY 236
>gi|25136573|gb|AAN65623.1| class I knotted-like homeodomain transcription factor [Populus
deltoides]
Length = 97
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 16/110 (14%)
Query: 40 IASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSP 99
+ +HP Y +LLAA+ +C +V P P + A+L ++ S S+ AN +
Sbjct: 1 LMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEA---CASAASMGPANTDGI----- 48
Query: 100 HERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
E LD F+ Y +L ++++L + ++ EA++ + +E +ALT
Sbjct: 49 GEDPALDQFMEAYCEMLTKYEQELSKPLK----EAMVFLQRVECQFRALT 94
>gi|145482543|ref|XP_001427294.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394374|emb|CAK59896.1| unnamed protein product [Paramecium tetraurelia]
Length = 882
Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 17/179 (9%)
Query: 49 LLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSL----QQANNNN---NHS-LSPH 100
+L V R+ TP+ + PL D AQ V RSY + +ANNN NHS +S
Sbjct: 251 MLTTRVIARRIQTPLFK-PLKDTDFAQVDRVTRSYVRMPIGYAKANNNPEILNHSWVSVP 309
Query: 101 ERQELDNFLAQYLIVLCTFKEQL--QQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTG 158
E +FL ++ TF+EQL + R + + N LQ + + GE
Sbjct: 310 FGSEDQSFL---IMRKNTFEEQLFKSEDERFEFDVNIQQIKRTINLLQEIIDGNKGEQAL 366
Query: 159 ATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTT 217
T D L + D ++++ P E+ + L++RV+Q+L EL Q T
Sbjct: 367 VTKVIDMRILQQLYR--NQTQDQNEIIQLFQSKPVESAKILIKRVKQKLN-ELVQARNT 422
>gi|82907968|gb|ABB93173.1| homeobox transcription factor KN1 [Picea abies]
gi|82907972|gb|ABB93175.1| homeobox transcription factor KN1 [Picea abies]
gi|82907974|gb|ABB93176.1| homeobox transcription factor KN1 [Picea abies]
gi|82907976|gb|ABB93177.1| homeobox transcription factor KN1 [Picea abies]
gi|82907978|gb|ABB93178.1| homeobox transcription factor KN1 [Picea abies]
gi|82907980|gb|ABB93179.1| homeobox transcription factor KN1 [Picea abies]
gi|82907982|gb|ABB93180.1| homeobox transcription factor KN1 [Picea abies]
gi|82907984|gb|ABB93181.1| homeobox transcription factor KN1 [Picea abies]
gi|82907988|gb|ABB93183.1| homeobox transcription factor KN1 [Picea abies]
gi|82907990|gb|ABB93184.1| homeobox transcription factor KN1 [Picea abies]
gi|82907992|gb|ABB93185.1| homeobox transcription factor KN1 [Picea abies]
gi|82907994|gb|ABB93186.1| homeobox transcription factor KN1 [Picea abies]
gi|82907996|gb|ABB93187.1| homeobox transcription factor KN1 [Picea abies]
gi|82907998|gb|ABB93188.1| homeobox transcription factor KN1 [Picea abies]
gi|82908000|gb|ABB93189.1| homeobox transcription factor KN1 [Picea abies]
gi|82908002|gb|ABB93190.1| homeobox transcription factor KN1 [Picea abies]
gi|82908004|gb|ABB93191.1| homeobox transcription factor KN1 [Picea abies]
gi|82908006|gb|ABB93192.1| homeobox transcription factor KN1 [Picea abies]
gi|82908008|gb|ABB93193.1| homeobox transcription factor KN1 [Picea abies]
gi|82908010|gb|ABB93194.1| homeobox transcription factor KN1 [Picea abies]
gi|82908012|gb|ABB93195.1| homeobox transcription factor KN1 [Picea abies]
gi|82908016|gb|ABB93197.1| homeobox transcription factor KN1 [Picea abies]
gi|82908018|gb|ABB93198.1| homeobox transcription factor KN1 [Picea abies]
gi|82908020|gb|ABB93199.1| homeobox transcription factor KN1 [Picea abies]
gi|82908022|gb|ABB93200.1| homeobox transcription factor KN1 [Picea abies]
gi|82908024|gb|ABB93201.1| homeobox transcription factor KN1 [Picea abies]
gi|82908026|gb|ABB93202.1| homeobox transcription factor KN1 [Picea abies]
gi|82908028|gb|ABB93203.1| homeobox transcription factor KN1 [Picea abies]
gi|82908030|gb|ABB93204.1| homeobox transcription factor KN1 [Picea abies]
gi|82908032|gb|ABB93205.1| homeobox transcription factor KN1 [Picea abies]
gi|82908036|gb|ABB93207.1| homeobox transcription factor KN1 [Picea abies]
gi|82908038|gb|ABB93208.1| homeobox transcription factor KN1 [Picea abies]
gi|82908040|gb|ABB93209.1| homeobox transcription factor KN1 [Picea abies]
gi|82908042|gb|ABB93210.1| homeobox transcription factor KN1 [Picea abies]
gi|82908044|gb|ABB93211.1| homeobox transcription factor KN1 [Picea abies]
gi|82908046|gb|ABB93212.1| homeobox transcription factor KN1 [Picea abies]
gi|82908048|gb|ABB93213.1| homeobox transcription factor KN1 [Picea abies]
gi|82908050|gb|ABB93214.1| homeobox transcription factor KN1 [Picea abies]
gi|82908052|gb|ABB93215.1| homeobox transcription factor KN1 [Picea abies]
gi|82908054|gb|ABB93216.1| homeobox transcription factor KN1 [Picea abies]
gi|82908056|gb|ABB93217.1| homeobox transcription factor KN1 [Picea abies]
gi|82908058|gb|ABB93218.1| homeobox transcription factor KN1 [Picea abies]
gi|82910342|gb|ABB94323.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910344|gb|ABB94324.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910346|gb|ABB94325.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910350|gb|ABB94327.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910352|gb|ABB94328.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910354|gb|ABB94329.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910356|gb|ABB94330.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910366|gb|ABB94335.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910368|gb|ABB94336.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910370|gb|ABB94337.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910372|gb|ABB94338.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910374|gb|ABB94339.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910376|gb|ABB94340.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910380|gb|ABB94342.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910382|gb|ABB94343.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910384|gb|ABB94344.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910386|gb|ABB94345.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910388|gb|ABB94346.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910390|gb|ABB94347.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910392|gb|ABB94348.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910394|gb|ABB94349.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910396|gb|ABB94350.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910398|gb|ABB94351.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910400|gb|ABB94352.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910402|gb|ABB94353.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910404|gb|ABB94354.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910408|gb|ABB94356.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910410|gb|ABB94357.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910412|gb|ABB94358.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910414|gb|ABB94359.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910416|gb|ABB94360.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910418|gb|ABB94361.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910420|gb|ABB94362.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910422|gb|ABB94363.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910424|gb|ABB94364.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910426|gb|ABB94365.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910428|gb|ABB94366.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910430|gb|ABB94367.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910432|gb|ABB94368.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910434|gb|ABB94369.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910436|gb|ABB94370.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910438|gb|ABB94371.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910444|gb|ABB94374.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910446|gb|ABB94375.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910448|gb|ABB94376.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910450|gb|ABB94377.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910452|gb|ABB94378.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910454|gb|ABB94379.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910458|gb|ABB94381.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910462|gb|ABB94383.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910464|gb|ABB94384.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910466|gb|ABB94385.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910468|gb|ABB94386.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910470|gb|ABB94387.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910472|gb|ABB94388.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910474|gb|ABB94389.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910480|gb|ABB94392.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910482|gb|ABB94393.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910484|gb|ABB94394.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910486|gb|ABB94395.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910488|gb|ABB94396.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910490|gb|ABB94397.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910492|gb|ABB94398.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910494|gb|ABB94399.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910496|gb|ABB94400.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910498|gb|ABB94401.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910500|gb|ABB94402.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910502|gb|ABB94403.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910504|gb|ABB94404.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910506|gb|ABB94405.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910514|gb|ABB94409.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910516|gb|ABB94410.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910520|gb|ABB94412.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910522|gb|ABB94413.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910524|gb|ABB94414.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910526|gb|ABB94415.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910528|gb|ABB94416.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910532|gb|ABB94418.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910536|gb|ABB94420.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910538|gb|ABB94421.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910540|gb|ABB94422.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910542|gb|ABB94423.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910544|gb|ABB94424.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910546|gb|ABB94425.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910548|gb|ABB94426.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910550|gb|ABB94427.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910552|gb|ABB94428.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910554|gb|ABB94429.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910556|gb|ABB94430.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910558|gb|ABB94431.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910560|gb|ABB94432.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910562|gb|ABB94433.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910568|gb|ABB94436.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910570|gb|ABB94437.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910572|gb|ABB94438.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910574|gb|ABB94439.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910576|gb|ABB94440.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910578|gb|ABB94441.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910582|gb|ABB94443.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910584|gb|ABB94444.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910586|gb|ABB94445.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910590|gb|ABB94447.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910592|gb|ABB94448.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910594|gb|ABB94449.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910596|gb|ABB94450.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910598|gb|ABB94451.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910600|gb|ABB94452.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910602|gb|ABB94453.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910604|gb|ABB94454.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910606|gb|ABB94455.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910608|gb|ABB94456.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910610|gb|ABB94457.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910612|gb|ABB94458.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910614|gb|ABB94459.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910616|gb|ABB94460.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910618|gb|ABB94461.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910620|gb|ABB94462.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910626|gb|ABB94465.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910628|gb|ABB94466.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910630|gb|ABB94467.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910632|gb|ABB94468.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910634|gb|ABB94469.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910636|gb|ABB94470.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910638|gb|ABB94471.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910640|gb|ABB94472.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910642|gb|ABB94473.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910644|gb|ABB94474.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910648|gb|ABB94476.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910650|gb|ABB94477.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910652|gb|ABB94478.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910656|gb|ABB94480.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910660|gb|ABB94482.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910662|gb|ABB94483.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910664|gb|ABB94484.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910666|gb|ABB94485.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910668|gb|ABB94486.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910670|gb|ABB94487.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910672|gb|ABB94488.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910676|gb|ABB94490.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910680|gb|ABB94492.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910682|gb|ABB94493.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910684|gb|ABB94494.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910688|gb|ABB94496.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910692|gb|ABB94498.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910694|gb|ABB94499.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910696|gb|ABB94500.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910698|gb|ABB94501.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910700|gb|ABB94502.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910702|gb|ABB94503.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910704|gb|ABB94504.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910706|gb|ABB94505.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910710|gb|ABB94507.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910712|gb|ABB94508.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910714|gb|ABB94509.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910716|gb|ABB94510.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910718|gb|ABB94511.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + + +DA + R Y N
Sbjct: 173 IKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-------LTREY------QNQQRR 219
Query: 96 SLSPHERQELDNFLAQY 112
++S ELD F+ Y
Sbjct: 220 TVSIGMDPELDQFMEAY 236
>gi|82910624|gb|ABB94464.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910658|gb|ABB94481.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910678|gb|ABB94491.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + + +DA + R Y N
Sbjct: 173 IKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-------LTREY------QNQQRR 219
Query: 96 SLSPHERQELDNFLAQY 112
++S ELD F+ Y
Sbjct: 220 TVSIGMDPELDQFMEAY 236
>gi|82910358|gb|ABB94331.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910588|gb|ABB94446.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + + +DA + R Y N
Sbjct: 173 IKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-------LTREY------QNQQRR 219
Query: 96 SLSPHERQELDNFLAQY 112
++S ELD F+ Y
Sbjct: 220 TVSIGMDPELDQFMEAY 236
>gi|82907970|gb|ABB93174.1| homeobox transcription factor KN1 [Picea abies]
Length = 238
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + + +DA + R Y N
Sbjct: 173 IKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-------LTREY------QNQQRR 219
Query: 96 SLSPHERQELDNFLAQY 112
++S ELD F+ Y
Sbjct: 220 TVSIGMDPELDQFMEAY 236
>gi|302785854|ref|XP_002974698.1| hypothetical protein SELMODRAFT_101670 [Selaginella moellendorffii]
gi|300157593|gb|EFJ24218.1| hypothetical protein SELMODRAFT_101670 [Selaginella moellendorffii]
Length = 800
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 64/160 (40%), Gaps = 17/160 (10%)
Query: 7 GVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQL 66
V + S G + GHH++ + + + PL Q L S + + P L
Sbjct: 593 AVPSGTESSSTWGISSIFGHHEKAQSKDPVIVKAFPEPL--QDLETKYSTIILKEPPGTL 650
Query: 67 PLIDAQ-------LAQSHHVLRSYGSLQQANNNNN------HSLSPHERQELDNFLAQYL 113
DAQ +A + +L+SY + + N + H L H ++EL N L + L
Sbjct: 651 RATDAQTEQERVEVAVTRLLLKSYYEIVRKNIQDAVPKAIMHFLVGHVKRELLNLLIKKL 710
Query: 114 IVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
F+E LQ+ R CRE+ LQ VS+
Sbjct: 711 YREALFEEMLQE--RDDIASRRKHCREVLRVLQQAVVVSV 748
>gi|82910460|gb|ABB94382.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910476|gb|ABB94390.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + + +DA + R Y N
Sbjct: 173 IKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-------LTREY------QNQQRR 219
Query: 96 SLSPHERQELDNFLAQY 112
++S ELD F+ Y
Sbjct: 220 TVSIGMDPELDQFMEAY 236
>gi|60100884|gb|AAK61308.2|AF285147_1 class 1 KNOTTED1-like protein MKN2 [Physcomitrella patens]
Length = 384
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
++A I HP Y +++ AHV ++ P +D + + + Q ++ +
Sbjct: 91 LRAAIIDHPFYPEMVLAHVRVFKIGAPGRLRRKLD-------ELAKKFQRFQXXDHTSKI 143
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
P ELD+F Y+ VL F E L++
Sbjct: 144 GSDP----ELDHFXRSYVGVLTKFAEDLEE 169
>gi|82910378|gb|ABB94341.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + + +DA + R Y N
Sbjct: 173 IKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-------LTREY------QNQQRR 219
Query: 96 SLSPHERQELDNFLAQY 112
++S ELD F+ Y
Sbjct: 220 TVSIGMDPELDQFMEAY 236
>gi|82908034|gb|ABB93206.1| homeobox transcription factor KN1 [Picea abies]
Length = 238
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + + +DA + R Y N
Sbjct: 173 IKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-------LTREY------QNQQRR 219
Query: 96 SLSPHERQELDNFLAQY 112
++S ELD F+ Y
Sbjct: 220 TVSIGMDPELDQFMEAY 236
>gi|20139943|sp|Q9M6D9.1|STM_BRAOL RecName: Full=Homeobox protein SHOOT MERISTEMLESS
gi|7340350|gb|AAF23753.2|AF193813_1 shoot meristemless [Brassica oleracea]
Length = 383
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQS 76
L+KA+I +HP Y +LL A+V+C +V P P + A+L ++
Sbjct: 122 LVKAKIMAHPHYHRLLLAYVNCQKVGAP----PEVQARLEET 159
>gi|82910534|gb|ABB94419.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910622|gb|ABB94463.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910674|gb|ABB94489.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IK++I +HP Y LL A++ C ++ P + + +DA + R Y N
Sbjct: 173 IKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDA-------LTREY------QNQQRR 219
Query: 96 SLSPHERQELDNFLAQY 112
++S ELD F+ Y
Sbjct: 220 TVSIGMDPELDQFMEAY 236
>gi|148536333|gb|ABQ85719.1| shoot meristemless-like protein, partial [Populus balsamifera]
Length = 89
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+ +C +V P P + A+L ++ S S+ N
Sbjct: 13 VKAKIMAHPHYHRLLAAYANCQKVGAP----PEVVARLEEA---CASAASIAPTNTG--- 62
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQL 123
E LD F+ Y +L ++++L
Sbjct: 63 --CIGEDPALDQFMEAYCEMLTKYEQEL 88
>gi|156257413|gb|ABU63127.1| transcription factor STM [Washingtonia robusta]
Length = 147
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHV 79
+IKA+I +HP Y +LL+A+V+C +V P++ + ++ A S +
Sbjct: 71 VIKAKIMAHPQYPRLLSAYVNCQKVGAPLEVVARLEEACASSFMI 115
>gi|15220767|ref|NP_176426.1| homeobox protein SHOOT MERISTEMLESS [Arabidopsis thaliana]
gi|20141647|sp|Q38874.2|STM_ARATH RecName: Full=Homeobox protein SHOOT MERISTEMLESS
gi|332195837|gb|AEE33958.1| homeobox protein SHOOT MERISTEMLESS [Arabidopsis thaliana]
Length = 382
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATP 62
+KA+I +HP Y +LLAA+V+C +V P
Sbjct: 121 VKAKIMAHPHYHRLLAAYVNCQKVGAP 147
>gi|15667543|dbj|BAB68272.1| transcription factor OSH3 [Oryza glaberrima]
gi|15667547|dbj|BAB68274.1| transcription factor OSH3 [Oryza barthii]
Length = 161
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 19 GGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHH 78
GGG +G D +KA I SHP Y +LLAA + C +V P +
Sbjct: 58 GGGRAAGVLDDP-----VKARIVSHPRYHRLLAAFLDCHKVGCPA-------EAAEEIAA 105
Query: 79 VLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
R + Q+A + E ELD F+ Y +L KE+L +
Sbjct: 106 AARVREARQRAAAAASRMPPAPEDPELDQFMEDYCKLLVECKEELSR 152
>gi|1167916|gb|AAC49148.1| class I knotted-like homeodomain containing protein; Method:
conceptual translation supplied by author [Arabidopsis
thaliana]
gi|1586022|prf||2202329A homeo domain protein
Length = 382
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATP 62
+KA+I +HP Y +LLAA+V+C +V P
Sbjct: 121 VKAKIMAHPHYHRLLAAYVNCQKVGAP 147
>gi|7940290|gb|AAF70849.1|AC003113_16 F2401.9 [Arabidopsis thaliana]
Length = 377
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATP 62
+KA+I +HP Y +LLAA+V+C +V P
Sbjct: 121 VKAKIMAHPHYHRLLAAYVNCQKVGAP 147
>gi|145550014|ref|XP_001460686.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428516|emb|CAK93289.1| unnamed protein product [Paramecium tetraurelia]
Length = 872
Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 49 LLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSL----QQANNNN---NHS-LSPH 100
+L+ V R+ TP+ + PL D AQ V RSY + +ANNN NHS +S
Sbjct: 241 MLSTRVIARRIQTPLFK-PLKDTDFAQVDRVTRSYVRMPIGYAKANNNQEILNHSWVSVP 299
Query: 101 ERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGAT 160
E +FL ++ TF+EQL + E + ++I+ T+ L + G
Sbjct: 300 FGSEDQSFL---IMRKNTFEEQLFKS-EDERFEFDVNIQQIKRTINLLQEIIDGNKEDPI 355
Query: 161 MSDDEDDLHMDFSLDQSAS-DSHDLMGFGPLLPTETERSLMERVRQEL 207
+ D+ + L ++ + D ++++ PTE+ + L++RV+Q+L
Sbjct: 356 LIAKVIDMRILQQLYRNQTQDQNEVLQIFQSKPTESAKILIKRVKQKL 403
>gi|345649243|gb|AEO14152.1| STM2 protein [Eschscholzia californica subsp. californica]
Length = 385
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLA 74
L++A+I +HP Y +LLAA+++C +V P + + +D L+
Sbjct: 114 LMRAKIMAHPHYPRLLAAYINCHKVGAPPEVVKRLDEILS 153
>gi|19424064|gb|AAL87330.1| putative homeobox protein [Arabidopsis thaliana]
Length = 326
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATP 62
+KA+I +HP Y +LLAA+V+C +V P
Sbjct: 65 VKAKIMAHPHYHRLLAAYVNCQKVGAP 91
>gi|297837183|ref|XP_002886473.1| hypothetical protein ARALYDRAFT_338146 [Arabidopsis lyrata subsp.
lyrata]
gi|297332314|gb|EFH62732.1| hypothetical protein ARALYDRAFT_338146 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATP 62
+KA+I +HP Y +LLAA+V+C +V P
Sbjct: 71 VKAKIMAHPHYHRLLAAYVNCQKVGAP 97
>gi|15667575|dbj|BAB68288.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667597|dbj|BAB68299.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667607|dbj|BAB68304.1| transcription factor OSH3 [Oryza rufipogon]
gi|15667611|dbj|BAB68306.1| transcription factor OSH3 [Oryza rufipogon]
gi|15667613|dbj|BAB68307.1| transcription factor OSH3 [Oryza rufipogon]
Length = 161
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 19 GGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHH 78
GGG +G D +KA I SHP Y +LLAA + C +V P +
Sbjct: 58 GGGRAAGVLDDP-----VKARIVSHPRYHRLLAAFLDCHKVGCPA-------EAAEEIAA 105
Query: 79 VLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
R + Q+A + E ELD F+ Y +L KE+L +
Sbjct: 106 AARVREARQRAAAAASRMPPAPEDPELDQFMEDYCKLLVECKEELSR 152
>gi|60476412|gb|AAX21345.1| homeobox knotted-1-like protein KNOX1 [Lotus japonicus]
Length = 181
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 48 QLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDN 107
+LLAA+VSC +V P P + A+L ++ GS + S S E LD
Sbjct: 2 RLLAAYVSCQKVGAP----PEVVARLEEAC------GSAVGMAGDAVGSGSIGEDPALDQ 51
Query: 108 FLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTG---VSLGEGTGATMSDD 164
F+ Y +L ++++L + ++ EA++ + IE + LT V EGT
Sbjct: 52 FMEAYCEMLTKYEQELSKPLK----EAMLFLQRIEFQFKNLTASSDVGCNEGTERNTGSS 107
Query: 165 EDDLHMDFSLDQSASD 180
++D + +D A D
Sbjct: 108 DEDADLYNMIDPQAED 123
>gi|98962493|gb|ABF59514.1| shoot meristemless [Cardamine hirsuta]
Length = 383
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATP 62
+KA+I +HP Y +LLAA+V+C +V P
Sbjct: 122 VKAKIMAHPHYHRLLAAYVNCQKVGAP 148
>gi|15667549|dbj|BAB68275.1| transcription factor OSH3 [Oryza glumipatula]
Length = 161
Score = 36.6 bits (83), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 19 GGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHH 78
GGG +G D +KA I SHP Y +LLAA + C +V P +
Sbjct: 58 GGGRAAGVLDDP-----VKARIVSHPRYHRLLAAFLDCHKVGCPA-------EAAEEIAA 105
Query: 79 VLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQ 125
R + Q+A + E ELD F+ Y +L KE+L +
Sbjct: 106 AARVREARQRAAAAASRMPPAPEDPELDQFMEDYCKLLVECKEELSR 152
>gi|188528488|emb|CAD58394.2| putative knotted-1-like protein [Helianthus tuberosus]
Length = 348
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I SHP Y +LL+A+++C ++ P + + ++ S V+ + S ++
Sbjct: 77 VKAKIMSHPHYPRLLSAYLNCQKIGAPPEVVERLEEACRAS--VMAAMSSRSGSDGAGTS 134
Query: 96 SLSPH-------ERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ LD F+ Y +L ++++L + + EA++ +E+ +A+
Sbjct: 135 GGGAGMSSSIVGQDPALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRMESQFKAI 190
Query: 149 TGVSLGEGTG 158
T + G G
Sbjct: 191 TFSNSDSGCG 200
>gi|393705655|gb|AFN17073.1| knotted1, partial [Panicum virgatum]
Length = 105
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 14/106 (13%)
Query: 44 PLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQ 103
P Y LLAA++ C +V P P + A+LA L+ L
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQ------ELEARQRTALGGLGAATEP 50
Query: 104 ELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
ELD F+ Y +L F+E+L + ++ EA+ R +E+ L +L+
Sbjct: 51 ELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLTSLS 92
>gi|345486344|ref|XP_001604704.2| PREDICTED: hypothetical protein LOC100121118 [Nasonia vitripennis]
Length = 347
Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 74 AQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVE 133
+Q HVL+ Y + N+ S P E +LDN+ F QL V+V+
Sbjct: 17 SQFEHVLKLYPQALRLKAENHKSKKPEELIKLDNW------SRGKFYPQLSYLVKVNTPR 70
Query: 134 AVM-----GCREIENTLQALTGVSLGEGTGATM 161
AVM +++ N QA+T +S +G G TM
Sbjct: 71 AVMAETKKAFKKLPNLEQAITALSNLKGVGTTM 103
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,541,916,791
Number of Sequences: 23463169
Number of extensions: 143787617
Number of successful extensions: 1105129
Number of sequences better than 100.0: 604
Number of HSP's better than 100.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 258
Number of HSP's that attempted gapping in prelim test: 1103993
Number of HSP's gapped (non-prelim): 819
length of query: 232
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 94
effective length of database: 9,121,278,045
effective search space: 857400136230
effective search space used: 857400136230
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)