BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026847
(232 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7
PE=2 SV=1
Length = 291
Score = 282 bits (722), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/222 (64%), Positives = 172/222 (77%), Gaps = 18/222 (8%)
Query: 1 MQEPSLGVMGSSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVA 60
MQE +LG+MG++ GG GD + +Q + +K EIA+HP+YEQLLAAHV+CLRVA
Sbjct: 1 MQEAALGMMGATV----GGDGDTAVVAEQN---RQLKGEIATHPMYEQLLAAHVACLRVA 53
Query: 61 TPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFK 120
TPIDQLP+I+AQL+QSHH+LRSY S + H+R ELDNFLAQY++VLC+FK
Sbjct: 54 TPIDQLPIIEAQLSQSHHLLRSYASTAVGYH--------HDRHELDNFLAQYVMVLCSFK 105
Query: 121 EQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASD 180
EQLQQHVRVHAVEAVM CREIEN L +LTG +LGEG+GATMS+DEDDL MDFS D S D
Sbjct: 106 EQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVD 165
Query: 181 ---SHDLMGFGPLLPTETERSLMERVRQELKIELKQVMTTYI 219
HD+ GFGPLLPTE+ERSLMERVRQELK+ELKQ + I
Sbjct: 166 FSGGHDMTGFGPLLPTESERSLMERVRQELKLELKQGFKSRI 207
>sp|P46606|HD1_BRANA Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1
Length = 294
Score = 273 bits (697), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 132/187 (70%), Positives = 153/187 (81%), Gaps = 10/187 (5%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+K EIA+HP+Y+QLLAAHV+CLRVATPIDQLP+I+AQL+ SHH+LRSY S
Sbjct: 31 MKGEIATHPMYDQLLAAHVACLRVATPIDQLPIIEAQLSHSHHLLRSYASTAVG------ 84
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
S H+RQELDNFLAQY++VLC+FKEQLQQHVRVHAVEAVM CREIEN L +LTG +LGE
Sbjct: 85 -FSHHDRQELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGE 143
Query: 156 GTGATMSDDEDDLHMDFSLDQSASD---SHDLMGFGPLLPTETERSLMERVRQELKIELK 212
G+GATMS+DEDDL MDFS D S D HD+ GFGPLLPTE+ERSLMERVRQELK+ELK
Sbjct: 144 GSGATMSEDEDDLQMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERVRQELKLELK 203
Query: 213 QVMTTYI 219
Q + I
Sbjct: 204 QGFKSRI 210
>sp|Q94LW3|KNOS3_ORYSJ Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica
GN=HOS66 PE=2 SV=1
Length = 314
Score = 248 bits (632), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/188 (67%), Positives = 151/188 (80%), Gaps = 9/188 (4%)
Query: 34 QLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNN 93
QL+K EIA HPL EQL+AAHV CLRVATPID LPLIDAQLAQS +L SY + ++
Sbjct: 51 QLLKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAA------HH 104
Query: 94 NHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSL 153
LSPH++QELD+FLAQY+++LC+F+EQLQQHVRVHAVEAVM CREIE +LQ LTG +L
Sbjct: 105 RPFLSPHDKQELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATL 164
Query: 154 GEGTGATMSDDEDDLH--MDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIEL 211
EGTGATMS+DED+ ++ +D SD HDLMGFGPL+PT++ERSLMERVRQELKIEL
Sbjct: 165 EEGTGATMSEDEDETAPMLEGPMDM-GSDGHDLMGFGPLMPTDSERSLMERVRQELKIEL 223
Query: 212 KQVMTTYI 219
KQ + I
Sbjct: 224 KQGFKSRI 231
>sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3
PE=1 SV=1
Length = 431
Score = 226 bits (575), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 148/216 (68%), Gaps = 23/216 (10%)
Query: 8 VMGSSSSGGGGGGGDVSGHHDQTATVQLI----KAEIASHPLYEQLLAAHVSCLRVATPI 63
+ G +GGG D G V KAEI SHPLYEQLL+AHV+CLR+ATP+
Sbjct: 127 IQGEMKTGGGENKNDGGGATAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPV 186
Query: 64 DQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQL 123
DQLP IDAQLAQS HV+ Y +L A L ++ ELD F+ Y+++LC+FKEQL
Sbjct: 187 DQLPRIDAQLAQSQHVVAKYSALGAAA----QGLVGDDK-ELDQFMTHYVLLLCSFKEQL 241
Query: 124 QQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSLDQSASDSH- 182
QQHVRVHA+EAVM C EIE +LQ+LTGVS GEG GATMSDDED +Q SD++
Sbjct: 242 QQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDED--------EQVESDANM 293
Query: 183 -----DLMGFGPLLPTETERSLMERVRQELKIELKQ 213
D++GFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 294 FDGGLDVLGFGPLIPTESERSLMERVRQELKHELKQ 329
>sp|P48001|KNAT4_ARATH Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4
PE=2 SV=3
Length = 393
Score = 225 bits (574), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 140/183 (76%), Gaps = 19/183 (10%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI SHPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS +V+ Y +L+ A
Sbjct: 124 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAA-----QG 178
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
L + +ELD+F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+ TGVS GEG
Sbjct: 179 LLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEG 238
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSH------DLMGFGPLLPTETERSLMERVRQELKIE 210
TGATMS+DED +Q SD+H D +GFGPL+PTE+ERSLMERVRQELK E
Sbjct: 239 TGATMSEDED--------EQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHE 290
Query: 211 LKQ 213
LKQ
Sbjct: 291 LKQ 293
>sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1
Length = 427
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 135/178 (75%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI +HPLYE LL+AHV+CLR+ATP+DQLP IDAQLAQS +V+ Y +L ++
Sbjct: 168 KAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSALGNGMVGDD-- 225
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C EIE +LQ+LTGVS GEG
Sbjct: 226 ------KELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 279
Query: 157 TGATMSDDEDDLHMDFS-LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
T ATMSDDEDD + L + HD MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 280 TSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQ 337
>sp|Q0J6N4|KNOSD_ORYSJ Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica
GN=OSH45 PE=2 SV=2
Length = 374
Score = 207 bits (528), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 110/178 (61%), Positives = 133/178 (74%), Gaps = 10/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KAEI +HPLYEQLL+AHV+CLR+ATP+DQLP IDAQLAQS V+ Y +L A ++
Sbjct: 109 KAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAGDDG- 167
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E LQ+LTG S GEG
Sbjct: 168 ------RELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEG 221
Query: 157 TGATMSDDEDD-LHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSD EDD + ++ + D D MGFG LPTE+ERSLMERVRQELK ELKQ
Sbjct: 222 TGATMSDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQ 277
>sp|P48002|KNAT5_ARATH Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5
PE=1 SV=2
Length = 383
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/196 (55%), Positives = 135/196 (68%), Gaps = 16/196 (8%)
Query: 21 GDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVL 80
G V G ++A+ KA I HP+YEQLLAAHV+CLRVATP+DQ+P IDAQL+Q H V
Sbjct: 106 GVVGGEDWRSAS---YKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVA 162
Query: 81 RSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCRE 140
Y +L +N +ELD+F++ Y+++LC+FKEQLQ HV VHA+EA+ C E
Sbjct: 163 AKYSTLGVVVDN----------KELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWE 212
Query: 141 IENTLQALTGVSLGEGTGATMSDDEDDLHMDFS---LDQSASDSHDLMGFGPLLPTETER 197
IE +LQ+LTGVS E G TMSDDEDD ++ D S S LMGFGPL+PTE ER
Sbjct: 213 IEQSLQSLTGVSPSESNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERER 272
Query: 198 SLMERVRQELKIELKQ 213
SLMERV++ELK ELKQ
Sbjct: 273 SLMERVKKELKHELKQ 288
>sp|O22300|LET12_SOLLC Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum
GN=LET12 PE=2 SV=1
Length = 426
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 136/179 (75%), Gaps = 10/179 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA+I +HPLY+QLL+AHVSCLR+ATP+DQLP IDAQLAQS +V+ Y L Q
Sbjct: 164 KADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ------ 217
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
P + ++LD F+ Y+++L +FKEQLQQHVRVHA+EAVM C E+E +LQ+LTGV+ GEG
Sbjct: 218 -PPLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEG 276
Query: 157 TGATMSDDEDDLHMDFS--LDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDD+DD + LD D D MGFGPL+PTE+ERSLMERVRQELK ELKQ
Sbjct: 277 TGATMSDDDDDQADSDTNFLD-GGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQ 334
>sp|Q0E3C3|KNOS2_ORYSJ Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica
GN=HOS58 PE=2 SV=2
Length = 313
Score = 192 bits (489), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 129/178 (72%), Gaps = 9/178 (5%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA +A+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + + A +
Sbjct: 43 KAAVAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSGG- 101
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVMGC E+E +LQ+LTG S GEG
Sbjct: 102 ------EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 155
Query: 157 TGATMSDDEDDLHMDFSLDQ-SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
TGATMSDDED+ +D + +D D MGFGPL+ TE ERSL+ERVR ELK ELKQ
Sbjct: 156 TGATMSDDEDN-QVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVRHELKNELKQ 212
>sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica
GN=HOS59 PE=2 SV=2
Length = 323
Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 125/177 (70%), Gaps = 3/177 (1%)
Query: 37 KAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHS 96
KA IA+HPLYE+LL AHV+CLRVATP+DQLP IDAQ+A L + + A
Sbjct: 48 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGGAP 107
Query: 97 LSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEG 156
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM C E+E TLQ+LTG S EG
Sbjct: 108 SG---GEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREG 164
Query: 157 TGATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQ 213
+GATMSDDED+ S +D D MGFGPL+ TE ERSL+ERVRQELK ELKQ
Sbjct: 165 SGATMSDDEDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVRQELKHELKQ 221
>sp|Q10ED2|KNOS8_ORYSJ Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica
GN=OSH43 PE=2 SV=1
Length = 341
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 24/138 (17%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KAEI SHP Y LLAA++ C +V P D L + A A QQ + + H
Sbjct: 83 VKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPA-----------AQQLDEADGH 131
Query: 96 SLSPHERQ------ELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
HE Q +LD F+ Y +L ++E+L++ + +EA +E L +L
Sbjct: 132 PRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSRVETQLDSLA 187
Query: 150 GVSLGEGTGATMSDDEDD 167
S EGTG+ S++E D
Sbjct: 188 -ESNCEGTGS--SEEEQD 202
>sp|O04134|KNAP1_MALDO Homeobox protein knotted-1-like 1 OS=Malus domestica PE=2 SV=1
Length = 398
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V+ IKA+I +HP Y L+ A++ C RV P D +P + + RS G+ ++ + +
Sbjct: 130 VEAIKAKIIAHPQYSNLVEAYMDCQRVGAPSDVVPRLSVARQEFEARQRSSGTSRETSKD 189
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
ELD F+ Y +L ++E+L + ++ EA+ R IE L L
Sbjct: 190 ----------PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNML 231
>sp|O04135|KNAP2_MALDO Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2 SV=1
Length = 397
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V+ IKA+I +HP Y LL A++ C RV P D + + + RS G+ ++
Sbjct: 129 VEAIKAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLSVARQEFEARQRSSGTSRET--- 185
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
S P ELD F+ Y +L ++E+L + ++ EA+ R IE L L
Sbjct: 186 ---SKDP----ELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNML 230
>sp|P46640|KNAT2_ARATH Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana GN=KNAT2
PE=1 SV=3
Length = 310
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 24/161 (14%)
Query: 32 TVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANN 91
++ +IK++IASHPLY +LL ++ C +V P++ +++ ++H R L
Sbjct: 65 SLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSCFGA 124
Query: 92 NNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL-TG 150
+ ELD F+ Y +L +K L + EA +IE LQ L TG
Sbjct: 125 D----------PELDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCTG 170
Query: 151 VSLGEG---TGATMSDDE----DDLHMDFSLDQSASDSHDL 184
+ GA SD+E DD+ D S Q S+ DL
Sbjct: 171 PASATALSDDGAVSSDEELREDDDIAADDS--QQRSNDRDL 209
>sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 OS=Hordeum vulgare GN=KNOX3 PE=1 SV=1
Length = 364
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 18/140 (12%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A V+ IKA+I SHP Y LLAA++ C +V P P + A+L L L+Q
Sbjct: 102 AADVEAIKAKIISHPHYSSLLAAYLDCQKVGAP----PEVSARLTAVAQDLE----LRQR 153
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL- 148
L ELD F+ Y +L ++E+L + ++ EA+ R +E L +L
Sbjct: 154 TALGG--LGTATEPELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNSLS 207
Query: 149 -TGVSLGE--GTGATMSDDE 165
+G SL TG++ D E
Sbjct: 208 ISGRSLRNILSTGSSEEDQE 227
>sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana GN=KNAT6
PE=1 SV=1
Length = 327
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 18/144 (12%)
Query: 26 HHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGS 85
+D ++ +IKA+IA HP Y +LL A++ C +V P + L++ ++ + V +
Sbjct: 75 RNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLE-EIQRESDVYK---- 129
Query: 86 LQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTL 145
Q+ ++ P ELD F+ Y +L +K L + EA +IE L
Sbjct: 130 -QEVVPSSCFGADP----ELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQL 180
Query: 146 QAL-TGVSLGEGT---GATMSDDE 165
+ L TGV G G SD+E
Sbjct: 181 RNLCTGVESARGVSEDGVISSDEE 204
>sp|Q41330|KN1_SOLLC Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1 PE=2 SV=1
Length = 355
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 31/164 (18%)
Query: 11 SSSSGGGGGGGDVSGHHDQTATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLID 70
+ +SGGG G G+V ++ +KA+I +HP LL A++ C +V P P +
Sbjct: 78 TETSGGGAGAGEV---------IEALKAKIIAHPQCSNLLDAYMDCQKVGAP----PEVA 124
Query: 71 AQLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVH 130
A+L+ +R +Q + + +S + ELD F+ Y +L ++E+L + ++
Sbjct: 125 ARLS----AVRQEFEARQRRSLTDRDVS--KDPELDQFMEAYYDMLVKYREELTRPLQ-- 176
Query: 131 AVEAVMGCREIENTLQALTGVSLG--------EGTGATMSDDED 166
EA+ ++IE L L + EG G++ D ++
Sbjct: 177 --EAMEFMQKIEAQLNMLGNAPVRIFNSEDKCEGVGSSEEDQDN 218
>sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1
Length = 359
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 38/172 (22%)
Query: 2 QEPSLG-------VMGSSSSGGGG--------GGG---------DVSGHHDQTATVQLIK 37
Q PS G V + +SGG G GGG + S V+ IK
Sbjct: 46 QPPSAGLPLTLNTVAATGNSGGSGNPVLQLANGGGLLDACVKAKEPSSSSPYAGDVEAIK 105
Query: 38 AEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSL 97
A+I SHP Y LL A++ C +V P P + A+L + + + + Q+ L
Sbjct: 106 AKIISHPHYYSLLTAYLECNKVGAP----PEVSARLTE---IAQEVEARQRTALGG---L 155
Query: 98 SPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ ELD F+ Y +L F+E+L + ++ EA+ R +E+ L +L+
Sbjct: 156 AAATEPELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLS 203
>sp|P46639|KNAT1_ARATH Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1
PE=1 SV=1
Length = 398
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 31 ATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQAN 90
+ V+ +KA+I +HP Y LL A++ C ++ P D + I A + + + QQ
Sbjct: 129 SDVEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITA-------ARQDFEARQQ-- 179
Query: 91 NNNNHSLSPHERQ-ELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ S+S R ELD F+ Y +L ++E+L + ++ EA+ R IE+ L L
Sbjct: 180 -RSTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQ----EAMEFIRRIESQLSML 233
>sp|Q7GDL5|KNOSA_ORYSJ Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica
GN=OSH71 PE=2 SV=1
Length = 311
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 62/156 (39%), Gaps = 21/156 (13%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IA HP Y LL+A++ C +V P + L++ + A
Sbjct: 52 TELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRG------GGGGATAG 105
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
L P ELD F+ Y VL +KE+L + EA I L +L G
Sbjct: 106 GEIGLDP----ELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCG-- 155
Query: 153 LGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFG 188
GA D D + S D+ S D FG
Sbjct: 156 -----GAPPPTDNSDEMVGSSEDEPCSGDADAADFG 186
>sp|A2Y007|KNOSA_ORYSI Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica
GN=OSH71 PE=2 SV=2
Length = 311
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 62/156 (39%), Gaps = 21/156 (13%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IA HP Y LL+A++ C +V P + L++ + A
Sbjct: 52 TELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRG------GGGGATAG 105
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVS 152
L P ELD F+ Y VL +KE+L + EA I L +L G
Sbjct: 106 GEIGLDP----ELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCG-- 155
Query: 153 LGEGTGATMSDDEDDLHMDFSLDQSASDSHDLMGFG 188
GA D D + S D+ S D FG
Sbjct: 156 -----GAPPPTDNSDEMVGSSEDEPCSGDADAADFG 186
>sp|Q9FP29|KNOS1_ORYSJ Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica
GN=OSH6 PE=2 SV=1
Length = 301
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 16/133 (12%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
+L+KA+IA HP Y LL+A++ C +V P + L+ + R +
Sbjct: 40 TELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLL-------KEIGRERRAGGGGGGA 92
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL-TGV 151
+ P ELD F+ Y VL +KE+L + EA I+ L L +G
Sbjct: 93 GQIGVDP----ELDEFMEAYCRVLVRYKEELSRPFD----EAASFLSSIQTQLSNLCSGA 144
Query: 152 SLGEGTGATMSDD 164
+ T AT SD+
Sbjct: 145 TSPPATTATHSDE 157
>sp|P46609|KNOS6_ORYSJ Homeobox protein knotted-1-like 6 OS=Oryza sativa subsp. japonica
GN=OSH1 PE=2 SV=2
Length = 361
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 33 VQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNN 92
V+ IKA+I SHP Y LLAA++ C +V P P + A+L L L+Q
Sbjct: 101 VEAIKAKIISHPHYSSLLAAYLDCQKVGAP----PEVAARLTAVAQDLE----LRQRTAL 152
Query: 93 NNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
L ELD F+ Y +L ++E+L + ++ EA+ R +E L L+
Sbjct: 153 G--VLGAATEPELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNTLS 203
>sp|P46608|HSBH1_SOYBN Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1
Length = 379
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 20/156 (12%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA+I +HP Y +LLAA+V+C +V P P + A+L ++ + A ++
Sbjct: 124 VKAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACASAATMAGGDAAAGSSCI 179
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT----GV 151
P LD F+ Y +L ++++L + ++ EA++ + IE + LT
Sbjct: 180 GEDP----ALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRIECQFKNLTISSSDF 231
Query: 152 SLGEGTGATMSDDED-DLHMDFSLDQSASDSHDLMG 186
+ EG S +ED DLH +D A D DL G
Sbjct: 232 ASNEGGDRNGSSEEDVDLHN--MIDPQAED-RDLKG 264
>sp|O80416|KNOSC_ORYSJ Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica
GN=OSH15 PE=2 SV=1
Length = 355
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 29/150 (19%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A + IKA+I +HP Y LLAA++ C +V P + L + A A+ L
Sbjct: 85 AAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAK----------LDAR 134
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ + P ELD F+ Y +L ++E+L + + EA+ + +E+ L +
Sbjct: 135 PPGRHDARDP----ELDQFMEAYCNMLAKYREELTRPID----EAMEFLKRVESQLDTIA 186
Query: 150 GVS-----------LGEGTGATMSDDEDDL 168
G + L +G + EDD+
Sbjct: 187 GGAHGGGAGSARLLLADGKSECVGSSEDDM 216
>sp|O65034|KNOSC_ORYSI Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica
GN=OSH15 PE=2 SV=2
Length = 355
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 29/150 (19%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQA 89
A + IKA+I +HP Y LLAA++ C +V P + L + A A+ L
Sbjct: 85 AAEAESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAK----------LDAR 134
Query: 90 NNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
+ + P ELD F+ Y +L ++E+L + + EA+ + +E+ L +
Sbjct: 135 PPGRHDARDP----ELDQFMEAYCNMLAKYREELTRPID----EAMEFLKRVESQLDTIA 186
Query: 150 GVS-----------LGEGTGATMSDDEDDL 168
G + L +G + EDD+
Sbjct: 187 GGAHGGGAGSARLLLADGKSECVGSSEDDM 216
>sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica
GN=OSH10 PE=2 SV=1
Length = 337
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 15/131 (11%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
IKA+I SHPLY LL A + C +V P P + +L+ L S + ++
Sbjct: 62 IKAKIMSHPLYPALLRAFIDCQKVGAP----PEVVGRLSALAGELDSRAEDRYLQGQSSD 117
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGE 155
ELD F+ Y+ +L +++++L + ++ EA R +E + + T G
Sbjct: 118 P-------ELDEFMETYIDMLVSYRQELTRPIQ----EADQFFRNMEAQIDSFTLDDNGS 166
Query: 156 GTGATMSDDED 166
G + D+++
Sbjct: 167 EGGNSSEDEQE 177
>sp|Q75LX9|KNOS5_ORYSJ Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp.
japonica GN=Os03g0673500 PE=3 SV=1
Length = 337
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNN 94
+IKA+I SHPLY LL A V C +V P P + +L+ V Q + +
Sbjct: 70 MIKAKIMSHPLYPSLLRAFVDCKKVGAP----PEVVGRLSSLAVVT---DVPQYSGDRCL 122
Query: 95 HSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQAL 148
+ P ELD F+ Y +L + ++L + ++ EA R IE + +L
Sbjct: 123 PAQQPAADPELDQFMETYCYMLTRYGQELARPIQ----EAEEFFRGIEEQIDSL 172
>sp|Q41853|RSH1_MAIZE Homeobox protein rough sheath 1 OS=Zea mays GN=RS1 PE=2 SV=1
Length = 351
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 20/132 (15%)
Query: 42 SHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHE 101
+HP Y LLAA++ C +V P D L + A A+ L + + P
Sbjct: 96 AHPQYSALLAAYLDCQKVGAPPDVLERLTAMAAK----------LDASAAGRHEPRDP-- 143
Query: 102 RQELDNFLAQYLIVLCTFKEQLQQHVR-----VHAVEAVMGCREIENTLQALTGVSLGEG 156
ELD F+ Y +L ++E+L + + + VEA + C + +SL +G
Sbjct: 144 --ELDQFMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGG-SSSARLSLADG 200
Query: 157 TGATMSDDEDDL 168
+ EDD+
Sbjct: 201 KSEGVGSSEDDM 212
>sp|Q10EC6|KNOS9_ORYSJ Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica
GN=Os03g0772100 PE=2 SV=2
Length = 347
Score = 39.3 bits (90), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQL 66
+KAEI SHP Y LLAA++ C +V P D L
Sbjct: 81 MKAEIMSHPQYSALLAAYLGCKKVGAPPDVL 111
>sp|Q126K5|RECO_POLSJ DNA repair protein RecO OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=recO PE=3 SV=1
Length = 249
Score = 38.1 bits (87), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 21/136 (15%)
Query: 30 TATVQLIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLA-------QSHHVLRS 82
+ATVQL+ AS + LA LR+ I LPL+DA+ A Q+ +VL +
Sbjct: 118 SATVQLL----ASQSVDTLQLALRAFELRLLRDIGLLPLLDAETATLAPLEPQARYVLVA 173
Query: 83 YGSLQQANNNNNHSLSPHERQEL-----DNFLAQYLIVLCT-----FKEQLQQHVRVHAV 132
L+QA++++ +SL + Q L DN L + C K QL+ + H
Sbjct: 174 EAGLRQAHDDDRNSLPGVQWQALQQALGDNALFSDTVRACIPGLNELKTQLRALLHYHCG 233
Query: 133 EAVMGCREIENTLQAL 148
V+ R++ LQAL
Sbjct: 234 VKVLKTRQMMMDLQAL 249
>sp|Q9M6D9|STM_BRAOL Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM
PE=2 SV=1
Length = 383
Score = 37.4 bits (85), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 35 LIKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQS 76
L+KA+I +HP Y +LL A+V+C +V P P + A+L ++
Sbjct: 122 LVKAKIMAHPHYHRLLLAYVNCQKVGAP----PEVQARLEET 159
>sp|Q38874|STM_ARATH Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM
PE=1 SV=2
Length = 382
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATP 62
+KA+I +HP Y +LLAA+V+C +V P
Sbjct: 121 VKAKIMAHPHYHRLLAAYVNCQKVGAP 147
>sp|Q948L5|KNOS7_ORYSJ Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica
GN=OSH3 PE=2 SV=1
Length = 365
Score = 35.0 bits (79), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Query: 36 IKAEIASHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNH 95
+KA I SHP Y +LLAA + C +V P + R + Q+A +
Sbjct: 73 VKARIVSHPRYHRLLAAFLDCHKVGCPA-------EAAEEIAAAARVREARQRAAAAASR 125
Query: 96 SLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALT 149
E ELD F+ Y +L KE+L + ++ EA R +E+ L ++
Sbjct: 126 MPPAPEDPELDQFMEDYCKLLVECKEELSRPLQ----EAEEFLRTVESELNSIN 175
>sp|O22299|LET6_SOLLC Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum
GN=LET6 PE=2 SV=1
Length = 355
Score = 35.0 bits (79), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 21/147 (14%)
Query: 42 SHPLYEQLLAAHVSCLRVATPIDQLPLIDAQLAQSHHVLRSYGSLQQANNNNNHSLSPHE 101
+HP Y +LL A+++C ++ P P + A+L + + + + +++++ E
Sbjct: 102 AHPHYHRLLTAYLNCQKIGAP----PEVVARLEE----ICATSATMGRSSSSSGGGIIGE 153
Query: 102 RQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTGV-------SLG 154
LD F+ Y +L ++++L + + EA++ IE +ALT +LG
Sbjct: 154 DPALDQFMEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALTLAPNSSHESALG 209
Query: 155 EGTGATMSDDED-DLHMDFSLDQSASD 180
E S DE+ D++ F +D A D
Sbjct: 210 EAMDRNGSSDEEVDVNNSF-IDPQAED 235
>sp|P39594|THIE_BACSU Thiamine-phosphate synthase OS=Bacillus subtilis (strain 168)
GN=thiE PE=1 SV=1
Length = 222
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
Query: 169 HMDFSLDQSASDSHDLMGFGPLLPTETER--------SLMERVRQE 206
H + Q+ D D +G GP+ PTET++ SL+E VR++
Sbjct: 119 HTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQ 164
>sp|Q8VI93|OAS3_MOUSE 2'-5'-oligoadenylate synthase 3 OS=Mus musculus GN=Oas3 PE=2 SV=1
Length = 1138
Score = 31.2 bits (69), Expect = 6.0, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 72 QLAQSHHVLRSYGSLQQANNNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHA 131
Q S H+ S+ A + + LS ++LD F+ +L F++Q++Q A
Sbjct: 435 QSTASSHMPPDRSSISTAGSRMSPDLSQIPSKDLDCFIQDHLRPSPQFQQQVKQ-----A 489
Query: 132 VEAVMGC---REIENTLQALTGVSLGEGT 157
++A++ C + + L+ G S G GT
Sbjct: 490 IDAILCCLREKSVYKVLRVSKGGSFGRGT 518
>sp|Q9QXZ0|MACF1_MOUSE Microtubule-actin cross-linking factor 1 OS=Mus musculus GN=Macf1
PE=1 SV=2
Length = 7354
Score = 31.2 bits (69), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 45 LYEQLLAA---HVSCLRVATPID-QLPLIDAQ----LAQSHHVLRSYGSLQQANNNNNHS 96
+ +Q LAA HV +V +D Q L+ A+ L+Q + + + S+Q + ++H+
Sbjct: 3746 MEKQTLAATDGHVDVNQVPETLDRQYELMKARHQELLSQQQNFIVATQSVQSFLDQHSHN 3805
Query: 97 LSPHERQELDNFLA----QYLIVLCTFKEQLQ--QHVRVHAVEAVMGCREIENTLQ 146
L+P ERQ+L L QY L + +L+ Q +R + + +E EN LQ
Sbjct: 3806 LTPEERQKLQEKLGELKEQYAASLARSEAELKQTQALRDELQKFLQDHKEFENWLQ 3861
>sp|Q8YYX9|GLGB_NOSS1 1,4-alpha-glucan branching enzyme GlgB OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=glgB PE=3 SV=1
Length = 764
Score = 30.8 bits (68), Expect = 9.1, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 91 NNNNHSLSPHERQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMGCREIENTLQALTG 150
++N HS+ R+E D +++V+C F Q H R+ E + + G
Sbjct: 659 SDNRHSVVSFIRREKDT--ENFVVVICNFTPQPHSHYRIGVPEKGFYTELFNSDARQYGG 716
Query: 151 VSLGEGTGATMSDDEDDLHMDFSLD 175
++G G +DD + +SLD
Sbjct: 717 SNMGN-LGGKWTDDWSMHNRPYSLD 740
>sp|Q54I56|SMC6_DICDI Structural maintenance of chromosomes protein 6 OS=Dictyostelium
discoideum GN=smc6 PE=3 SV=1
Length = 1185
Score = 30.4 bits (67), Expect = 9.5, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 64 DQLPLIDAQLAQSHHVLRSYGS-LQQANNNNNHSLSPHER--QELDNFLAQYLIVLCTFK 120
DQ+ ++ QL + LR + L++ NNN L R QE D F A+Y +L K
Sbjct: 882 DQIDVLSNQLGNIENNLRKFNEGLRKLNNNKQALLQQQGRSAQERDQFKAEYQRILEIVK 941
Query: 121 EQLQQHVRV 129
E+ + ++
Sbjct: 942 EKTDKATQI 950
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,200,921
Number of Sequences: 539616
Number of extensions: 3458946
Number of successful extensions: 26929
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 26595
Number of HSP's gapped (non-prelim): 243
length of query: 232
length of database: 191,569,459
effective HSP length: 114
effective length of query: 118
effective length of database: 130,053,235
effective search space: 15346281730
effective search space used: 15346281730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)