Query 026848
Match_columns 232
No_of_seqs 182 out of 549
Neff 5.8
Searched_HMMs 13730
Date Mon Mar 25 23:42:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026848.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026848hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kshb_ b.1.18.8 (B:) GMP-PDE 26.9 5.6 0.00041 30.1 -0.3 12 1-12 93-105 (149)
2 d1k12a_ b.18.1.15 (A:) Fucose 19.1 25 0.0018 24.8 2.1 18 209-226 137-154 (158)
3 d1rypd_ d.153.1.4 (D:) Proteas 12.0 1.4E+02 0.01 22.5 5.0 34 76-109 19-52 (241)
4 d1k3ia2 b.18.1.1 (A:-12-150) G 8.9 91 0.0066 21.4 2.6 17 210-226 145-161 (162)
5 d1z8ma1 d.298.1.2 (A:1-88) Hyp 7.8 2.6E+02 0.019 17.9 4.5 25 43-67 37-71 (88)
6 d1h75a_ c.47.1.1 (A:) Glutared 7.3 69 0.005 19.8 1.1 17 85-105 51-67 (76)
7 d1hq8a_ d.169.1.1 (A:) NK cell 6.7 55 0.004 21.7 0.3 35 64-98 17-51 (123)
8 d1irue_ d.153.1.4 (E:) Proteas 6.5 1.1E+02 0.0081 22.9 2.2 30 76-105 18-47 (234)
9 d1iruf_ d.153.1.4 (F:) Proteas 6.5 1.3E+02 0.0094 22.7 2.6 48 76-128 20-67 (238)
10 d1yara1 d.153.1.4 (A:13-233) P 6.4 4.1E+02 0.03 19.1 5.7 37 70-106 6-43 (221)
No 1
>d1kshb_ b.1.18.8 (B:) GMP-PDE delta {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.86 E-value=5.6 Score=30.11 Aligned_cols=12 Identities=42% Similarity=0.977 Sum_probs=9.7
Q ss_pred CceeccCCc-cee
Q 026848 1 MAFCISNSA-IWK 12 (232)
Q Consensus 1 ~~~~~~~~~-~~~ 12 (232)
+.||||||- ||.
T Consensus 93 FGF~IP~S~NTwe 105 (149)
T d1kshb_ 93 FGFVIPNSTNTWQ 105 (149)
T ss_dssp EEEECTTEEEEEE
T ss_pred eeeEecCCCcchh
Confidence 368999997 786
No 2
>d1k12a_ b.18.1.15 (A:) Fucose binding lectin {European eel (Anguilla anguilla) [TaxId: 7936]}
Probab=19.12 E-value=25 Score=24.78 Aligned_cols=18 Identities=22% Similarity=0.091 Sum_probs=13.9
Q ss_pred cCCCCceeEeEEEEeecC
Q 026848 209 FGDDSRATLEEVLVFCSP 226 (232)
Q Consensus 209 lag~~~F~V~EiEVf~~~ 226 (232)
+.+...+.|.|+|||..+
T Consensus 137 ~~~~~~lsl~EveVY~~~ 154 (158)
T d1k12a_ 137 LPTSESLHLCEVEVNVDK 154 (158)
T ss_dssp CCSSSCCCEEEEEEEEEE
T ss_pred eCCCceEEEEEEEEecCC
Confidence 445567889999999754
No 3
>d1rypd_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=11.95 E-value=1.4e+02 Score=22.52 Aligned_cols=34 Identities=9% Similarity=0.162 Sum_probs=28.5
Q ss_pred HHHHhccCCCCEEEEEEeCCCCeEEeecCCCCCC
Q 026848 76 NFHSCCDFKGPCVIIGHTNKSLKFGAFNPEGYRS 109 (232)
Q Consensus 76 ~Fh~~cd~kGptl~iiks~~g~VFGgY~s~~w~~ 109 (232)
.+-.++-.+|.|++-|+.++|-|+.+-+..+...
T Consensus 19 Eya~kav~~G~tvIgik~~dgVvlaad~~~~~~~ 52 (241)
T d1rypd_ 19 EYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKL 52 (241)
T ss_dssp HHHHHHHTTSCCEEEEECSSCEEEEEECCCSSCC
T ss_pred HHHHHHHHcCCCEEEEEeCCEEEEEEEccccccC
Confidence 5666777899999999999999999998776544
No 4
>d1k3ia2 b.18.1.1 (A:-12-150) Galactose oxidase, N-terminal domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=8.89 E-value=91 Score=21.43 Aligned_cols=17 Identities=18% Similarity=0.360 Sum_probs=13.1
Q ss_pred CCCCceeEeEEEEeecC
Q 026848 210 GDDSRATLEEVLVFCSP 226 (232)
Q Consensus 210 ag~~~F~V~EiEVf~~~ 226 (232)
+|.....|.|||||...
T Consensus 145 ~g~~~~~i~E~~~y~~~ 161 (162)
T d1k3ia2 145 NGQPWTSIAEINVFQAS 161 (162)
T ss_dssp TSCSCCEESEEEEEECS
T ss_pred CCCeeeEEEEEEEEccC
Confidence 34556889999999864
No 5
>d1z8ma1 d.298.1.2 (A:1-88) Hypothetical protein HP0894 {Helicobacter pylori [TaxId: 210]}
Probab=7.76 E-value=2.6e+02 Score=17.91 Aligned_cols=25 Identities=8% Similarity=0.212 Sum_probs=16.2
Q ss_pred cCCCcccc----ccccccC------CceeEEEEee
Q 026848 43 DLPFSLSL----VDNTFLR------GRELKCCYKA 67 (232)
Q Consensus 43 ~~~~~~sL----L~~~~l~------~~~~~LlY~a 67 (232)
+.|+|+++ |..+|-+ .-.|.|+|+-
T Consensus 37 ~~pl~~~~~dH~L~G~~~g~rechi~~D~llIy~~ 71 (88)
T d1z8ma1 37 KEPLDPQFQDHALKGKWKPFRECHIKPDVLLVYLV 71 (88)
T ss_dssp SCCCCGGGCCEECSGGGTTSEECCSSTTCEEEEEE
T ss_pred CCCCCccccCccccCcccCeeEEEEcCCEEEEEEE
Confidence 45777763 3366665 3459999975
No 6
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}
Probab=7.31 E-value=69 Score=19.77 Aligned_cols=17 Identities=35% Similarity=0.694 Sum_probs=12.0
Q ss_pred CCEEEEEEeCCCCeEEeecCC
Q 026848 85 GPCVIIGHTNKSLKFGAFNPE 105 (232)
Q Consensus 85 Gptl~iiks~~g~VFGgY~s~ 105 (232)
=|+|++ +|.++|||.+.
T Consensus 51 vP~i~i----~~~~i~Gf~~d 67 (76)
T d1h75a_ 51 LPVVIA----GDLSWSGFRPD 67 (76)
T ss_dssp SCEEEE----TTEEEESCCHH
T ss_pred CCEEEE----CCEEEECCCHH
Confidence 366554 67899999654
No 7
>d1hq8a_ d.169.1.1 (A:) NK cell-activating receptor nkg2d {Mouse (Mus musculus) [TaxId: 10090]}
Probab=6.68 E-value=55 Score=21.72 Aligned_cols=35 Identities=9% Similarity=0.157 Sum_probs=26.9
Q ss_pred EEeecccCCcHHHHHHhccCCCCEEEEEEeCCCCe
Q 026848 64 CYKATIDGFSATNFHSCCDFKGPCVIIGHTNKSLK 98 (232)
Q Consensus 64 lY~as~dGfs~~~Fh~~cd~kGptl~iiks~~g~V 98 (232)
+|+-..+-.+-..=.+.|..+|..|+.|.+...+-
T Consensus 17 CY~~~~~~~~w~~A~~~C~~~gg~La~i~s~~e~~ 51 (123)
T d1hq8a_ 17 CYQFFNEEKTWNQSQASCLSQNSSLLKIYSKEEQD 51 (123)
T ss_dssp EEEEEEEEECHHHHHHHHHTTTCEECCCSCTTTTG
T ss_pred EEEEECcccCHHHHHHHHhhccCccceEehHHHHH
Confidence 56556666677777888999999999998866543
No 8
>d1irue_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=6.50 E-value=1.1e+02 Score=22.94 Aligned_cols=30 Identities=10% Similarity=-0.046 Sum_probs=24.5
Q ss_pred HHHHhccCCCCEEEEEEeCCCCeEEeecCC
Q 026848 76 NFHSCCDFKGPCVIIGHTNKSLKFGAFNPE 105 (232)
Q Consensus 76 ~Fh~~cd~kGptl~iiks~~g~VFGgY~s~ 105 (232)
..-.++-.+|.|++-|+.++|-|+++-+..
T Consensus 18 EYa~kav~~G~t~vgik~~dgVvlaad~~~ 47 (234)
T d1irue_ 18 EYDIEAIKLGSTAIGIQTSEGVCLAVEKRI 47 (234)
T ss_dssp HHHHHHHTTSCCEEEEEETTEEEEEEECCC
T ss_pred HHHHHHHHcCCCEEEEEeCCEEEEEEecCc
Confidence 445566678999999999999999997554
No 9
>d1iruf_ d.153.1.4 (F:) Proteasome alpha subunit (non-catalytic) {Cow (Bos taurus) [TaxId: 9913]}
Probab=6.47 E-value=1.3e+02 Score=22.69 Aligned_cols=48 Identities=4% Similarity=-0.024 Sum_probs=33.2
Q ss_pred HHHHhccCCCCEEEEEEeCCCCeEEeecCCCCCCCCCccCCCceEEEEEeCCC
Q 026848 76 NFHSCCDFKGPCVIIGHTNKSLKFGAFNPEGYRSTDDYYDTFDAFLFYWTDNN 128 (232)
Q Consensus 76 ~Fh~~cd~kGptl~iiks~~g~VFGgY~s~~w~~~~~~~~d~~aFLFsl~~~~ 128 (232)
.+..++-++|.|++-|+.++|-|+++-+..+= .... ...=||.++++.
T Consensus 20 EYA~kav~~G~t~vgik~~dgVvlaad~~~~~----~~~~-~~~KI~~I~~~i 67 (238)
T d1iruf_ 20 EYAMEAVKQGSATVGLKSKTHAVLVALKRAQS----ELAA-HQKKILHVDNHI 67 (238)
T ss_dssp HHHHHHHHHSCCEEEEECSSEEEEEEECCCSS----TTBC-CCCCEEEEETTE
T ss_pred HHHHHHHhcCCCEEEEEeCCEEEEEEeccccc----CCCC-ccceEEEeCCce
Confidence 56667778899999999999999999865431 1111 223466676643
No 10
>d1yara1 d.153.1.4 (A:13-233) Proteasome alpha subunit (non-catalytic) {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=6.42 E-value=4.1e+02 Score=19.11 Aligned_cols=37 Identities=11% Similarity=-0.042 Sum_probs=27.0
Q ss_pred cCCcHH-HHHHhccCCCCEEEEEEeCCCCeEEeecCCC
Q 026848 70 DGFSAT-NFHSCCDFKGPCVIIGHTNKSLKFGAFNPEG 106 (232)
Q Consensus 70 dGfs~~-~Fh~~cd~kGptl~iiks~~g~VFGgY~s~~ 106 (232)
||.-.+ ..=.++-++|.|++-|+.++|-|+++-+...
T Consensus 6 ~G~l~QvEYa~~av~~G~t~vgi~~~dgVvlaad~r~~ 43 (221)
T d1yara1 6 DGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVR 43 (221)
T ss_dssp TSCCHHHHHHHHHHTTSCCEEEEEETTEEEEEECCCCC
T ss_pred CCcchHHHHHHHHHhcCCcEEEEEeCCEEEEEEecccC
Confidence 444333 2333556889999999999999999997653
Done!